BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001661
(1035 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4E4G|A Chain A, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|B Chain B, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|C Chain C, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|D Chain D, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|E Chain E, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|F Chain F, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|G Chain G, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|H Chain H, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
Length = 521
Score = 361 bits (926), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 200/492 (40%), Positives = 289/492 (58%), Gaps = 9/492 (1%)
Query: 202 VSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVA 261
+ +FI GK V ++ NPAT EV V L + + AV++AK A P W T
Sbjct: 27 LGHFIDGKRVAGTSGRVSNIFNPATGEVQGTVALASDADLAAAVESAKAAQPKWAATNPQ 86
Query: 262 TRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEF 321
R R+ K +L+ + ++LA ++ E G T+ A+ D++ GLEV E + LQ EF
Sbjct: 87 RRARVFXKFVQLLNDNXNELAEXLSREHGKTIDDAKGDIVRGLEVCEFVIGIPHLQKSEF 146
Query: 322 VPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSM 381
A G+D Y R+P+G+ AGI PFNFP P W F+ A+ CGN FILKPSE++P +
Sbjct: 147 TEGAGPGIDXYSIRQPVGIGAGITPFNFPGXIPXWXFAPAIACGNAFILKPSERDPSVPI 206
Query: 382 ILAALAMEAGLPDGVLNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAARGKR 441
LA L +EAGLP G+LN+V+G ++ I DI A+SFV S+ + +Y AA GKR
Sbjct: 207 RLAELXIEAGLPAGILNVVNGDKGAVDAILTHPDIAAVSFVGSTPIARYVYGTAAXNGKR 266
Query: 442 VQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV--QWEDELV 499
Q G KN+ II PDA +D NAL+ AG+G+AGERC A+S AV VG + D+LV
Sbjct: 267 AQCFGGAKNHXIIXPDADLDQAANALIGAGYGSAGERCXAISVAVPVGEETANRLIDKLV 326
Query: 500 ELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGN 559
++L++ TD AD GPVV+ E + +I LI + ++ GA L++DGR+ + GYENG+
Sbjct: 327 PXVESLRIGPYTDEKADXGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGH 386
Query: 560 FVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAA 619
F+G + DVT + + YK EIFGPVL ++A + EEA+ + ++ + NG +I+T G AA
Sbjct: 387 FIGGCLFDDVTPDXDIYKTEIFGPVLSVVRARNYEEALSLPXKHEYGNGVAIYTRDGDAA 446
Query: 620 RKFQNEIEARLVGINVPVP-----SSFSSINES--GEFNFCGKSGVQFYTQIKTVAQQWN 672
R F + I VG+NVP+P SF S G+ N G ++F+T+ KT+ +W
Sbjct: 447 RDFASRINIGXVGVNVPIPVPLAYHSFGGWKSSSFGDLNQHGTDSIKFWTRTKTITSRWP 506
Query: 673 DLPKLGMPLTMP 684
K G ++P
Sbjct: 507 SGIKDGAEFSIP 518
>pdb|1T90|A Chain A, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|B Chain B, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|C Chain C, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|D Chain D, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
Length = 486
Score = 338 bits (868), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 189/479 (39%), Positives = 283/479 (59%), Gaps = 11/479 (2%)
Query: 201 RVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPV 260
++ N+I G++V+ + DV+NPAT+EV QVP++T E+ A A AF W V
Sbjct: 5 KLKNYINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFKTWSKVAV 64
Query: 261 ATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGE 320
R RI+F Q+L+ + ++LA IT+E G K A +V G+E VE A +L +G+
Sbjct: 65 PRRARILFNFQQLLSQHKEELAHLITIENGKNTKEALGEVGRGIENVEFAAGAPSLMMGD 124
Query: 321 FVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTS 380
+ + ++ +R P+GV GI PFNFP M P WMF +A+ GNTFILKPSE+ P +
Sbjct: 125 SLASIATDVEAANYRYPIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILKPSERTPLLT 184
Query: 381 MILAALAMEAGLPDGVLNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAARGK 440
L L +AGLP GV N+V+G +DV+N I + +IKAISFV S +Y + + K
Sbjct: 185 EKLVELFEKAGLPKGVFNVVYGAHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGSENLK 244
Query: 441 RVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTA-VFVGSSVQWEDELV 499
RVQS G KN+ I++ DA+++ T+ +V A FG+AGERC A + V G + ++ +L
Sbjct: 245 RVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGIADEFMAKLQ 304
Query: 500 ELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGN 559
E +K+ G D +GPV+ + K + I+ ++ GA L+ DGR V ++G
Sbjct: 305 EKVADIKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENV---SDDGY 361
Query: 560 FVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAA 619
FVGPTI +VT+ M +K+EIF PVL ++ +L+EAI++ N++ F NGA +FTS+ A
Sbjct: 362 FVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAIEIANKSEFANGACLFTSNSNAI 421
Query: 620 RKFQNEIEARLVGINVPVPS-----SFSSINES--GEFNFCGKSGVQFYTQIKTVAQQW 671
R F+ I+A ++GIN+ VP+ FS S G + GK V FYT+ K V ++
Sbjct: 422 RYFRENIDAGMLGINLGVPAPMAFFPFSGWKSSFFGTLHANGKDSVDFYTRKKVVTARY 480
>pdb|1A4S|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|B Chain B, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|C Chain C, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|D Chain D, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|B Chain B, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|C Chain C, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|D Chain D, Betaine Aldehyde Dehydrogenase From Cod Liver
Length = 503
Score = 211 bits (536), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 146/485 (30%), Positives = 230/485 (47%), Gaps = 15/485 (3%)
Query: 204 NFIGGKFVDLRGSATID-VINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVAT 262
N+ GG+ + + AT + V PAT V Q+ EE AV +A+ A+ W
Sbjct: 22 NYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYLKWSKMAGIE 81
Query: 263 RQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFV 322
R R+M + +IR D +A + G T+ A+ D+ + +E +A G+ +
Sbjct: 82 RSRVMLEAARIIRERRDNIAKLEVINNGKTITEAEYDIDAAWQCIEYYAGLAPTLSGQHI 141
Query: 323 --PNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTS 380
P G Y REPLGVCAGI +N+P M W + A+ CGN + KPS P T
Sbjct: 142 QLPG---GAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTG 198
Query: 381 MILAALAMEAGLPDGVLNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAARGK 440
+ILA + EAG+P G++N+V G + + +C ++ +SF S ++ +A K
Sbjct: 199 VILAEIFHEAGVPVGLVNVVQGGAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKTVK 258
Query: 441 RVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV--QWEDEL 498
V GGK+ +I D ++ + + A F G+ CT T VFV + Q+ +E+
Sbjct: 259 HVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTN-GTRVFVQREIMPQFLEEV 317
Query: 499 VELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVV--PGYE 556
V+ KA+ V +G ++S D++ + A GA +L G + P +
Sbjct: 318 VKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLK 377
Query: 557 NGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSG 616
NG F+ P +L + +M C KEEIFGPV+ + D+ EE ++ N F + +FT
Sbjct: 378 NGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDI 437
Query: 617 LAARKFQNEIEARLVGINV----PVPSSFSSINESGEFNFCGKSGVQFYTQIKTVAQQWN 672
A + +EA IN PV F SG G++ V +Y+Q+KTV +
Sbjct: 438 SRAHRVAANLEAGTCYINTYSISPVEVPFGGYKMSGFGRENGQATVDYYSQLKTVIVEMG 497
Query: 673 DLPKL 677
D+ L
Sbjct: 498 DVDSL 502
>pdb|2WOX|A Chain A, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|B Chain B, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|C Chain C, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|D Chain D, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct
Length = 489
Score = 209 bits (533), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 146/478 (30%), Positives = 237/478 (49%), Gaps = 11/478 (2%)
Query: 205 FIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQ 264
+IGG++V+ AT + INPA EV ++V + E+ + AV +A W R
Sbjct: 9 YIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRS 68
Query: 265 RIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQR-DVLFGLEVVEQACAVATLQIGEFVP 323
RI+ + +++R D+LA T++ G L + D++ G +V+E + GE +P
Sbjct: 69 RILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIP 128
Query: 324 NALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMIL 383
Y REPLGV AGI +N+P LW + A+ GN I KPSE P T++ L
Sbjct: 129 LRETSF-VYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKL 187
Query: 384 AALAMEAGLPDGVLNIVHGTN-DVINHICDDEDIKAISFVASSTASVQMYARAAARG-KR 441
A + EAG+PDGV N++ G+ +V + + I+ ISF ++ ++ A A++ K
Sbjct: 188 AEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKE 247
Query: 442 VQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQ--WEDELV 499
V GGK+ II PDA +D + V A F ++G+ CT T VF+ S Q +E +++
Sbjct: 248 VTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTN-GTRVFIHRSQQARFEAKVL 306
Query: 500 ELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGN 559
E + +++ D + + GP+VS + + I++ A LL G + + G
Sbjct: 307 ERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGA 366
Query: 560 FVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAA 619
+V PT+ D +M +EEIFGPV+ + D +EAI+ N + A + T A
Sbjct: 367 YVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARA 426
Query: 620 RKFQNEIEARLVGINV----PVPSSFSSINESGEFNFCGKSGVQFYTQIKTVAQQWND 673
+ + +EA + IN P +SG G + + YT+IK+V + D
Sbjct: 427 HRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLTTLAHYTRIKSVQVELGD 484
>pdb|2WME|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|F Chain F, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|G Chain G, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|H Chain H, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 209 bits (533), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 146/478 (30%), Positives = 237/478 (49%), Gaps = 11/478 (2%)
Query: 205 FIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQ 264
+IGG++V+ AT + INPA EV ++V + E+ + AV +A W R
Sbjct: 10 YIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRS 69
Query: 265 RIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQR-DVLFGLEVVEQACAVATLQIGEFVP 323
RI+ + +++R D+LA T++ G L + D++ G +V+E + GE +P
Sbjct: 70 RILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIP 129
Query: 324 NALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMIL 383
Y REPLGV AGI +N+P LW + A+ GN I KPSE P T++ L
Sbjct: 130 LRETSF-VYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKL 188
Query: 384 AALAMEAGLPDGVLNIVHGTN-DVINHICDDEDIKAISFVASSTASVQMYARAAARG-KR 441
A + EAG+PDGV N++ G+ +V + + I+ ISF ++ ++ A A++ K
Sbjct: 189 AEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKE 248
Query: 442 VQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQ--WEDELV 499
V GGK+ II PDA +D + V A F ++G+ CT T VF+ S Q +E +++
Sbjct: 249 VTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTN-GTRVFIHRSQQARFEAKVL 307
Query: 500 ELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGN 559
E + +++ D + + GP+VS + + I++ A LL G + + G
Sbjct: 308 ERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGA 367
Query: 560 FVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAA 619
+V PT+ D +M +EEIFGPV+ + D +EAI+ N + A + T A
Sbjct: 368 YVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARA 427
Query: 620 RKFQNEIEARLVGINV----PVPSSFSSINESGEFNFCGKSGVQFYTQIKTVAQQWND 673
+ + +EA + IN P +SG G + + YT+IK+V + D
Sbjct: 428 HRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLTTLAHYTRIKSVQVELGD 485
>pdb|2XDR|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
Length = 489
Score = 209 bits (532), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 146/478 (30%), Positives = 237/478 (49%), Gaps = 11/478 (2%)
Query: 205 FIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQ 264
+IGG++V+ AT + INPA EV ++V + E+ + AV +A W R
Sbjct: 9 YIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRS 68
Query: 265 RIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQR-DVLFGLEVVEQACAVATLQIGEFVP 323
RI+ + +++R D+LA T++ G L + D++ G +V+E + GE +P
Sbjct: 69 RILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIP 128
Query: 324 NALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMIL 383
Y REPLGV AGI +N+P LW + A+ GN I KPSE P T++ L
Sbjct: 129 LRETSF-VYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKL 187
Query: 384 AALAMEAGLPDGVLNIVHGTN-DVINHICDDEDIKAISFVASSTASVQMYARAAARG-KR 441
A + EAG+PDGV N++ G+ +V + + I+ ISF ++ ++ A A++ K
Sbjct: 188 AEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKE 247
Query: 442 VQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQ--WEDELV 499
V GGK+ II PDA +D + V A F ++G+ CT T VF+ S Q +E +++
Sbjct: 248 VTMALGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTN-GTRVFIHRSQQARFEAKVL 306
Query: 500 ELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGN 559
E + +++ D + + GP+VS + + I++ A LL G + + G
Sbjct: 307 ERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGA 366
Query: 560 FVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAA 619
+V PT+ D +M +EEIFGPV+ + D +EAI+ N + A + T A
Sbjct: 367 YVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARA 426
Query: 620 RKFQNEIEARLVGINV----PVPSSFSSINESGEFNFCGKSGVQFYTQIKTVAQQWND 673
+ + +EA + IN P +SG G + + YT+IK+V + D
Sbjct: 427 HRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLTTLAHYTRIKSVQVELGD 484
>pdb|3ZQA|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
Length = 490
Score = 206 bits (523), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 145/478 (30%), Positives = 236/478 (49%), Gaps = 11/478 (2%)
Query: 205 FIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQ 264
+IGG++V+ AT + INPA EV ++V + E+ + AV +A W R
Sbjct: 10 YIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRS 69
Query: 265 RIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQR-DVLFGLEVVEQACAVATLQIGEFVP 323
RI+ + +++R D+LA T++ G L + D++ G +V+E + GE +P
Sbjct: 70 RILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIP 129
Query: 324 NALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMIL 383
Y REPLGV AGI +N+P LW + A+ GN I KPSE P T++ L
Sbjct: 130 LRETSF-VYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKL 188
Query: 384 AALAMEAGLPDGVLNIVHGTN-DVINHICDDEDIKAISFVASSTASVQMYARAAARG-KR 441
A + EAG+PDGV N++ G+ +V + + I+ ISF ++ ++ A A++ K
Sbjct: 189 AEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKE 248
Query: 442 VQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQ--WEDELV 499
V GGK+ II PDA +D + V A F ++G+ T T VF+ S Q +E +++
Sbjct: 249 VTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVATN-GTRVFIHRSQQARFEAKVL 307
Query: 500 ELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGN 559
E + +++ D + + GP+VS + + I++ A LL G + + G
Sbjct: 308 ERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGA 367
Query: 560 FVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAA 619
+V PT+ D +M +EEIFGPV+ + D +EAI+ N + A + T A
Sbjct: 368 YVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARA 427
Query: 620 RKFQNEIEARLVGINV----PVPSSFSSINESGEFNFCGKSGVQFYTQIKTVAQQWND 673
+ + +EA + IN P +SG G + + YT+IK+V + D
Sbjct: 428 HRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLTTLAHYTRIKSVQVELGD 485
>pdb|2WME|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|E Chain E, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 205 bits (522), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 145/478 (30%), Positives = 236/478 (49%), Gaps = 11/478 (2%)
Query: 205 FIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQ 264
+IGG++V+ AT + INPA EV ++V + E+ + AV +A W R
Sbjct: 10 YIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRS 69
Query: 265 RIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQR-DVLFGLEVVEQACAVATLQIGEFVP 323
RI+ + +++R D+LA T++ G L + D++ G +V+E + GE +P
Sbjct: 70 RILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIP 129
Query: 324 NALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMIL 383
Y REPLGV AGI +N+P LW + A+ GN I KPSE P T++ L
Sbjct: 130 LRETSF-VYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKL 188
Query: 384 AALAMEAGLPDGVLNIVHGTN-DVINHICDDEDIKAISFVASSTASVQMYARAAARG-KR 441
A + EAG+PDGV N++ G+ +V + + I+ ISF ++ ++ A A++ K
Sbjct: 189 AEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKE 248
Query: 442 VQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQ--WEDELV 499
V GGK+ II PDA +D + V A F ++G+ T T VF+ S Q +E +++
Sbjct: 249 VTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVXTN-GTRVFIHRSQQARFEAKVL 307
Query: 500 ELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGN 559
E + +++ D + + GP+VS + + I++ A LL G + + G
Sbjct: 308 ERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGA 367
Query: 560 FVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAA 619
+V PT+ D +M +EEIFGPV+ + D +EAI+ N + A + T A
Sbjct: 368 YVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARA 427
Query: 620 RKFQNEIEARLVGINV----PVPSSFSSINESGEFNFCGKSGVQFYTQIKTVAQQWND 673
+ + +EA + IN P +SG G + + YT+IK+V + D
Sbjct: 428 HRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLTTLAHYTRIKSVQVELGD 485
>pdb|2OPX|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From
Escherichia Coli
Length = 479
Score = 196 bits (499), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 146/476 (30%), Positives = 235/476 (49%), Gaps = 17/476 (3%)
Query: 205 FIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQ 264
+I G+FV RG A IDV+NPAT+ V S++P E+ + A+DAA+RA P W+ P R
Sbjct: 10 YIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPEWEALPAIERA 69
Query: 265 RIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVPN 324
+ K+ IR +++ I E G + A+ +V F + ++ A GE + +
Sbjct: 70 SWLRKISAGIRERATEISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRYEGEIIQS 129
Query: 325 ALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILA 384
G + F+ LGV GI P+NFP + A+ GNT ++KPSE P ++ A
Sbjct: 130 DRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFA 189
Query: 385 ALAMEAGLPDGVLNIVHGTNDVINH-ICDDEDIKAISFVASSTASVQMYARAAARGKRVQ 443
+ E GLP GV N+V G + + + + + +S S +A ++ A AA +V
Sbjct: 190 KIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAKNITKVC 249
Query: 444 SNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWEDELV-ELA 502
GGK AI+M DA ++ + A+V + +G+ C + V+V + D+ V L
Sbjct: 250 LELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNC-AERVYVQKGIY--DQFVNRLG 306
Query: 503 KALK-VNVGTDASAD---VGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENG 558
+A++ V G A + +GP+++ +++ + + AV+ GA + L G+ + GY
Sbjct: 307 EAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEGKGY--- 363
Query: 559 NFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSS--- 615
+ PT+L DV M EE FGPVL + D+LEEAI M N + + +SI+T +
Sbjct: 364 -YYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEEAISMANDSDYGLTSSIYTQNLNV 422
Query: 616 GLAARKFQNEIEARLVGINVPVPSSF-SSINESGEFNFCGKSGVQFYTQIKTVAQQ 670
+ A K E + N F + +SG GK G+ Y Q + V Q
Sbjct: 423 AMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHEYLQTQVVYLQ 478
>pdb|3K2W|A Chain A, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|B Chain B, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|C Chain C, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|D Chain D, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|E Chain E, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|F Chain F, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|G Chain G, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|H Chain H, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
Length = 497
Score = 196 bits (497), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 144/475 (30%), Positives = 235/475 (49%), Gaps = 9/475 (1%)
Query: 200 NRVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTP 259
N+V NFIGG++V S TID+++P+T +V ++P + ++A++ A+ A AW
Sbjct: 12 NKV-NFIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKADAENALEVAQAAQKAWAKLT 70
Query: 260 VATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIG 319
TRQ ++ IR + LA + EQG L A+ +V ++ C A G
Sbjct: 71 ARTRQNMLRTFANKIRENKHILAPMLVAEQGKLLSVAEMEVDVTATFIDYGCDNALTIEG 130
Query: 320 EFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGT 379
+ +P+ Y + P GV GI +NFP A+ GNT +LKP+++ P
Sbjct: 131 DILPSDNQDEKIYIHKVPRGVVVGITAWNFPLALAGRKIGPALITGNTMVLKPTQETPLA 190
Query: 380 SMILAALAMEAGLPDGVLNIVHGTNDVINH-ICDDEDIKAISFVASSTASVQMYARAAAR 438
+ L +A EAGLPDGVLN+++GT V+ +C+ K I+ S+ A Q+Y +A
Sbjct: 191 TTELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKTSAEY 250
Query: 439 GKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV--QWED 496
V GGK ++M DA +D + F G+ CT + ++V +SV ++
Sbjct: 251 MTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVER-LYVHASVYDEFMA 309
Query: 497 ELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYE 556
+ + L K LKV DA + +GP + D I ++ A+ GA++ G+ V G+E
Sbjct: 310 KFLPLVKGLKVGDPMDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFE 369
Query: 557 NGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSG 616
G + PT+L DV + EE FGP+L ++ S+E+AI+ N + + A + T S
Sbjct: 370 GGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKVSSMEQAIEFCNDSIYGLSAYVHTQSF 429
Query: 617 LAARKFQNEIEARLVGINVPVPSSFSSIN----ESGEFNFCGKSGVQFYTQIKTV 667
+ +++E V IN + + +SG GK G++ Y + KTV
Sbjct: 430 ANINQAISDLEVGEVYINRGMGEQHQGFHNGWKQSGFGGEDGKFGLEQYLEKKTV 484
>pdb|2IMP|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E.
Coli: The Ternary Complex With Product Bound (L)-Lactate
And Nadh.
pdb|2ILU|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E.
Coli: The Binary Complex With Nadph
Length = 479
Score = 195 bits (496), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 144/476 (30%), Positives = 234/476 (49%), Gaps = 17/476 (3%)
Query: 205 FIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQ 264
+I G+FV RG A IDV+NPAT+ V S++P E+ + A+DAA+RA P W+ P R
Sbjct: 10 YIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPEWEALPAIERA 69
Query: 265 RIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVPN 324
+ K+ IR +++ I E G + A+ +V F + ++ A GE + +
Sbjct: 70 SWLRKISAGIRERASEISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRYEGEIIQS 129
Query: 325 ALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILA 384
G + F+ LGV GI P+NFP + A+ GNT ++KPSE P ++ A
Sbjct: 130 DRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFA 189
Query: 385 ALAMEAGLPDGVLNIVHGTNDVINH-ICDDEDIKAISFVASSTASVQMYARAAARGKRVQ 443
+ E GLP GV N+V G + + + + + +S S +A ++ A AA +V
Sbjct: 190 KIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAKNITKVX 249
Query: 444 SNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWEDELV-ELA 502
GGK AI+M DA ++ + A+V + +G+ C + V+V + D+ V L
Sbjct: 250 LELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNC-AERVYVQKGIY--DQFVNRLG 306
Query: 503 KALK-VNVGTDASAD---VGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENG 558
+A++ V G A + +GP+++ +++ + + AV+ GA + G+ + GY
Sbjct: 307 EAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGY--- 363
Query: 559 NFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSS--- 615
+ PT+L DV M EE FGPVL + D+LE+AI M N + + +SI+T +
Sbjct: 364 -YYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQNLNV 422
Query: 616 GLAARKFQNEIEARLVGINVPVPSSF-SSINESGEFNFCGKSGVQFYTQIKTVAQQ 670
+ A K E + N F + +SG GK G+ Y Q + V Q
Sbjct: 423 AMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHEYLQTQVVYLQ 478
>pdb|2HG2|A Chain A, Structure Of Lactaldehyde Dehydrogenase
Length = 479
Score = 194 bits (492), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 144/476 (30%), Positives = 234/476 (49%), Gaps = 17/476 (3%)
Query: 205 FIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQ 264
+I G+FV RG A IDV+NPAT+ V S++P E+ + A+DAA+RA P W+ P R
Sbjct: 10 YIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPEWEALPAIERA 69
Query: 265 RIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVPN 324
+ K+ IR +++ I E G + A+ +V F + ++ A GE + +
Sbjct: 70 SWLRKISAGIRERASEISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRYEGEIIQS 129
Query: 325 ALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILA 384
G + F+ LGV GI P+NFP + A+ GNT ++KPSE P ++ A
Sbjct: 130 DRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFA 189
Query: 385 ALAMEAGLPDGVLNIVHGTNDVINH-ICDDEDIKAISFVASSTASVQMYARAAARGKRVQ 443
+ E GLP GV N+V G + + + + + +S S +A ++ A AA +V
Sbjct: 190 KIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAKNITKVC 249
Query: 444 SNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWEDELV-ELA 502
GGK AI+M DA ++ + A+V + +G+ C + V+V + D+ V L
Sbjct: 250 LELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNC-AERVYVQKGIY--DQFVNRLG 306
Query: 503 KALK-VNVGTDASAD---VGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENG 558
+A++ V G A + +GP+++ +++ + + AV+ GA + G+ + GY
Sbjct: 307 EAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGY--- 363
Query: 559 NFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSS--- 615
+ PT+L DV M EE FGPVL + D+LE+AI M N + + +SI+T +
Sbjct: 364 -YYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQNLNV 422
Query: 616 GLAARKFQNEIEARLVGINVPVPSSF-SSINESGEFNFCGKSGVQFYTQIKTVAQQ 670
+ A K E + N F + +SG GK G+ Y Q + V Q
Sbjct: 423 AMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHEYLQTQVVYLQ 478
>pdb|2D4E|A Chain A, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|B Chain B, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|C Chain C, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|D Chain D, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
Length = 515
Score = 191 bits (485), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 147/496 (29%), Positives = 230/496 (46%), Gaps = 31/496 (6%)
Query: 204 NFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATR 263
+FI G+FV T ++PAT EV E A AA AF W T R
Sbjct: 29 HFIAGEFVPSESGETFPSLDPATNEVLGVAARGGEREVDRAAKAAHEAFQRWSRTKAKER 88
Query: 264 QRIMFKLQELIRRDIDKLAMNITVEQGTTLKA-------AQRDVLFGLEVVEQACAVATL 316
+R + ++ ELI + D+LA+ ++ G L+ A + F E E A T
Sbjct: 89 KRYLLRIAELIEKHADELAVMECLDAGQVLRIVRAQVARAAENFAFYAEYAEHAMEDRTF 148
Query: 317 QIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKN 376
+ Y R P G I P+N P M W + A+ GNT +LKP+E +
Sbjct: 149 PVDR-------DWLYYTVRVPAGPVGIITPWNAPLMLSTWRIAPALAFGNTVVLKPAEWS 201
Query: 377 PGTSMILAALAMEAGLPDGVLNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYAR-A 435
P T+ LA + EA LP GV N+V G + + + + T + ++ R A
Sbjct: 202 PFTATKLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNA 261
Query: 436 AARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWE 495
A KR+ GGK+ A++ DA ++ L+A+V F GERCTA S+ + V + +E
Sbjct: 262 ADHLKRLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTA-SSRLLVEEKI-FE 319
Query: 496 D---ELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVV 552
D ++VE A+A++V D +VGP++ E ++ ++ GA LL+ G
Sbjct: 320 DFVGKVVERARAIRVGHPLDPETEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKT 379
Query: 553 ----PGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNG 608
GN++ PT+ ++M+ +EEIFGPVL+ + EEA++ N ++
Sbjct: 380 SFRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLVAIPFKDEEEALRKANDTKYGLA 438
Query: 609 ASIFTSSGLAARKFQNEIEARLVGINV----PVPSSFSSINESGEFNFCGKSGVQFYTQI 664
A +FT A + E+EA +V +N +P+ F + SG+ G + FYT +
Sbjct: 439 AYVFTRDLERAHRLALELEAGMVYLNSHNVRHLPTPFGGVKGSGDRREGGTYALDFYTDL 498
Query: 665 KTVAQQWN--DLPKLG 678
KT+A +PK G
Sbjct: 499 KTIALPLRPPHVPKFG 514
>pdb|1BXS|A Chain A, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|B Chain B, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|C Chain C, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|D Chain D, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
Length = 501
Score = 187 bits (474), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 158/501 (31%), Positives = 232/501 (46%), Gaps = 26/501 (5%)
Query: 184 VNTSASPSGVSP--NIDNNRVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEF 241
+++SA P +P N+ FI ++ V NPAT+E +V E+
Sbjct: 1 MSSSAMPDVPAPLTNLQFKYTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDV 60
Query: 242 KDAVDAAKRAFPA---WKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQR 298
AV AA++AF W+ + R R++ KL +LI RD LA + G A
Sbjct: 61 DKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYL 120
Query: 299 DVLFGLEVVEQACAVATLQI-GEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWM 357
L G + CA +I G +P TY EP+GVC I P+NFP + LW
Sbjct: 121 MDLGGCIKTLRYCAGWADKIQGRTIPMD-GNFFTYTRSEPVGVCGQIIPWNFPLLMFLWK 179
Query: 358 FSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGTNDVIN-HICDDEDI 416
A++CGNT ++KP+E+ P T++ + +L EAG P GV+NIV G I D+
Sbjct: 180 IGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDV 239
Query: 417 KAISFVASSTASVQMYARAAARG--KRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGA 474
++F S+ ++ AA + KRV GGK+ I+ DA +D + F
Sbjct: 240 DKVAFTGSTEVG-KLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYH 298
Query: 475 AGERCTALSTAVFVGSSVQWEDELVE--LAKALKVNVGTDASADV--GPVVSVEVKDQIS 530
G+ C A S +FV S+ DE V + +A K +G + V GP + E ++I
Sbjct: 299 QGQCCIAASR-LFVEESIY--DEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKIL 355
Query: 531 RLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQA 590
LI++ GA L G P G F+ PT+ DVT +M KEEIFGPV M+
Sbjct: 356 DLIESGKKEGAKLECGGG----PWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKF 411
Query: 591 DSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGIN----VPVPSSFSSINE 646
SL++ IK N + A IFT+ A + +++ V +N V F
Sbjct: 412 KSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKM 471
Query: 647 SGEFNFCGKSGVQFYTQIKTV 667
SG G+ G YT++KTV
Sbjct: 472 SGNGRELGEYGFHEYTEVKTV 492
>pdb|3JZ4|A Chain A, Crystal Structure Of E. Coli Nadp Dependent Enzyme
pdb|3JZ4|B Chain B, Crystal Structure Of E. Coli Nadp Dependent Enzyme
pdb|3JZ4|D Chain D, Crystal Structure Of E. Coli Nadp Dependent Enzyme
Length = 481
Score = 186 bits (471), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 131/472 (27%), Positives = 217/472 (45%), Gaps = 12/472 (2%)
Query: 201 RVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPV 260
R I G+++D IDV NPA + VP +E + A+DAA RA PAW+
Sbjct: 9 RQQALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRALTA 68
Query: 261 ATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGE 320
R I+ L+ D LA +T+EQG L A+ ++ + +E G+
Sbjct: 69 KERATILRNWFNLMMEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYGD 128
Query: 321 FVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTS 380
+P ++P+GV A I P+NFP A+ G T +LKP+ + P ++
Sbjct: 129 TIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSA 188
Query: 381 MILAALAMEAGLPDGVLNIVHGTNDVI-NHICDDEDIKAISFVASSTASVQMYARAAARG 439
+ LA LA+ AG+P GV N+V G+ + N + + ++ +SF S+ Q+ + A
Sbjct: 189 LALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAKDI 248
Query: 440 KRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV--QWEDE 497
K+V GG I+ DA +D + +++ F AG+ C + ++V V ++ ++
Sbjct: 249 KKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVC-ANRLYVQDGVYDRFAEK 307
Query: 498 LVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYEN 557
L + L + G D +GP++ + ++ I +A++ GA ++ G+
Sbjct: 308 LQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGK----AHERG 363
Query: 558 GNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGL 617
GNF PTIL DV +N + KEE FGP+ + + I N F A +
Sbjct: 364 GNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLS 423
Query: 618 AARKFQNEIEARLVGINVPVPSS----FSSINESGEFNFCGKSGVQFYTQIK 665
+ +E +VGIN + S+ F I SG K G++ Y +IK
Sbjct: 424 RVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIK 475
>pdb|4A0M|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|B Chain B, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|C Chain C, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|D Chain D, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
Length = 496
Score = 186 bits (471), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 144/484 (29%), Positives = 226/484 (46%), Gaps = 17/484 (3%)
Query: 205 FIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPA--WKNTPVAT 262
FI G++ + I VINP+T+E+ +P T E+ + AV AA+RAF W T A
Sbjct: 11 FIDGEWREPIKKNRIPVINPSTEEIIGDIPAATAEDVEVAVVAARRAFRRNNWSATSGAH 70
Query: 263 RQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEF- 321
R + + I D T++ G A D+ E A G+
Sbjct: 71 RATYLRAIAAKITEKKDHFVKLETIDSGKPFDEAVLDIDDVASCFEYFAGQAEALDGKQK 130
Query: 322 --VPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGT 379
V + ++ R+PLGV I P+N+P + W + A+ G T +LKPSE T
Sbjct: 131 APVTLPMERFKSHVLRQPLGVVGLISPWNYPLLMATWKIAPALAAGCTAVLKPSELASVT 190
Query: 380 SMILAALAMEAGLPDGVLNIVHGTN-DVINHICDDEDIKAISFVASSTASVQMYARAAAR 438
+ + E GLP GVLNI+ G D + D+ I+F SS ++ A AA
Sbjct: 191 CLEFGEVCNEVGLPPGVLNILTGLGPDAGAPLVSHPDVDKIAFTGSSATGSKVMASAAQL 250
Query: 439 GKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWE--D 496
K V GGK+ ++ D ID + + F G+ C+A S + V S+ E D
Sbjct: 251 VKPVTLELGGKSPIVVFEDVDIDKVVEWTIFGCFWTNGQICSATSR-LLVHESIAAEFVD 309
Query: 497 ELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGY- 555
+LV+ K +K++ + +GPV+S D+I + I A GA++L G P +
Sbjct: 310 KLVKWTKNIKISDPFEEGCRLGPVISKGQYDKIMKFISTAKSEGATILYGGSR---PEHL 366
Query: 556 ENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSS 615
+ G ++ PTI+ D++++M+ +KEE+FGPVL S +EAI + N + A++F++
Sbjct: 367 KKGYYIEPTIVTDISTSMQIWKEEVFGPVLCVKTFSSEDEAIALANDTEYGLAAAVFSND 426
Query: 616 GLAARKFQNEIEARLVGINVPVP----SSFSSINESGEFNFCGKSGVQFYTQIKTVAQQW 671
+ +E V +N P + + I SG G+ G+Q Y IK V Q
Sbjct: 427 LERCERITKALEVGAVWVNCSQPCFVQAPWGGIKRSGFGRELGEWGIQNYLNIKQVTQDI 486
Query: 672 NDLP 675
+D P
Sbjct: 487 SDEP 490
>pdb|3JZ4|C Chain C, Crystal Structure Of E. Coli Nadp Dependent Enzyme
Length = 481
Score = 186 bits (471), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 131/472 (27%), Positives = 217/472 (45%), Gaps = 12/472 (2%)
Query: 201 RVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPV 260
R I G+++D IDV NPA + VP +E + A+DAA RA PAW+
Sbjct: 9 RQQALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRALTA 68
Query: 261 ATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGE 320
R I+ L+ D LA +T+EQG L A+ ++ + +E G+
Sbjct: 69 KERATILRNWFNLMMEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYGD 128
Query: 321 FVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTS 380
+P ++P+GV A I P+NFP A+ G T +LKP+ + P ++
Sbjct: 129 TIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSA 188
Query: 381 MILAALAMEAGLPDGVLNIVHGTNDVI-NHICDDEDIKAISFVASSTASVQMYARAAARG 439
+ LA LA+ AG+P GV N+V G+ + N + + ++ +SF S+ Q+ + A
Sbjct: 189 LALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAKDI 248
Query: 440 KRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV--QWEDE 497
K+V GG I+ DA +D + +++ F AG+ C + ++V V ++ ++
Sbjct: 249 KKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVC-ANRLYVQDGVYDRFAEK 307
Query: 498 LVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYEN 557
L + L + G D +GP++ + ++ I +A++ GA ++ G+
Sbjct: 308 LQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGK----AHERG 363
Query: 558 GNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGL 617
GNF PTIL DV +N + KEE FGP+ + + I N F A +
Sbjct: 364 GNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLS 423
Query: 618 AARKFQNEIEARLVGINVPVPSS----FSSINESGEFNFCGKSGVQFYTQIK 665
+ +E +VGIN + S+ F I SG K G++ Y +IK
Sbjct: 424 RVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIK 475
>pdb|3R31|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Agrobacterium Tumefaciens
pdb|3R31|B Chain B, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Agrobacterium Tumefaciens
Length = 517
Score = 184 bits (467), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 138/495 (27%), Positives = 235/495 (47%), Gaps = 23/495 (4%)
Query: 184 VNTSASPSGVSPNIDNNRVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKD 243
V T A+P P + S+FI G +V+ + I PAT E+ +++ T +
Sbjct: 2 VMTIATPLKAQP-----KASHFIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVER 56
Query: 244 AVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAA-QRDVLF 302
A+ +AKRA W R RI+ + +++R D L+ T++ G ++ D
Sbjct: 57 AIASAKRAQKEWAAMSPMARGRILKRAADIMRERNDALSTLETLDTGKPIQETIVADPTS 116
Query: 303 GLEVVEQACAVATLQI-GEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIA 361
G + E +A + G+++P L G Y R PLGVC GI +N+P W + A
Sbjct: 117 GADAFEFFGGIAPSALNGDYIP--LGGDFAYTKRVPLGVCVGIGAWNYPQQIACWKAAPA 174
Query: 362 VTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGTNDVINHICDDEDIKAISF 421
+ GN + KPSE P ++ +A + +EAGLP G+ N++ G D + + D+ +S
Sbjct: 175 LVAGNAMVFKPSENTPLGALKIAEILIEAGLPKGLFNVIQGDRDTGPLLVNHPDVAKVSL 234
Query: 422 VASSTASVQMYARAAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTA 481
S ++ A AA K V GGK+ I+ DA I++ + + F ++G+ C+
Sbjct: 235 TGSVPTGRKVAAAAAGHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSN 294
Query: 482 LSTAVFV--GSSVQWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDN 539
T VFV + ++ + L +A+ + D + +GP+VS ++++ I+
Sbjct: 295 -GTRVFVQKKAKARFLENLKRRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKGKAE 353
Query: 540 GASLLLDG---RNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEA 596
GA+L+ G N+ G +V PT+ DVT +M +EEIFGPV+ + D +E
Sbjct: 354 GATLITGGGIPNNVA----GEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFDDEDEV 409
Query: 597 IKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINV----PVPSSFSSINESGEFNF 652
+ N F +FT+ A + + +EA + IN PV F +SG
Sbjct: 410 LARANATEFGLAGGVFTADLARAHRVVDGLEAGTLWINTYNLCPVEIPFGGSKQSGFGRE 469
Query: 653 CGKSGVQFYTQIKTV 667
+ ++ Y+++KTV
Sbjct: 470 NSAAALEHYSELKTV 484
>pdb|3IWK|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|C Chain C, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|D Chain D, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|E Chain E, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|F Chain F, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|G Chain G, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|H Chain H, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|I Chain I, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|J Chain J, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|K Chain K, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|L Chain L, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
Length = 503
Score = 184 bits (466), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 143/470 (30%), Positives = 230/470 (48%), Gaps = 20/470 (4%)
Query: 222 INPATQEVGSQVPLTTYEEFKDAVDAAKRAFPA-----WKNTPVATRQRIMFKLQELIRR 276
INP+T+ + +P T E+ AVDAAKRA W + R R + + I+
Sbjct: 28 INPSTENIIGDIPAATKEDVDLAVDAAKRAISRKNGRDWSAASGSLRARYLRAIAAKIKE 87
Query: 277 DIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVAT-LQIGEFVPNALCGLDT---Y 332
D+L +++ G L+ A D+ + E +A L + P +L +DT Y
Sbjct: 88 KKDELGKLESIDCGKPLEEALADLDDVVACFEYYAGLAEELDSKQKAPISL-PMDTFKSY 146
Query: 333 CFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGL 392
+EP+GV A I P+N+P + W + A+ G ILKPSE T + L + E GL
Sbjct: 147 ILKEPIGVVALITPWNYPFLMATWKIAPALAAGCAAILKPSELASVTCLELGEICKEVGL 206
Query: 393 PDGVLNIVHGT-NDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNY 451
P GVLNIV G ++ + D+ ISF SS ++ AA K V GGK+
Sbjct: 207 PRGVLNIVTGLGHEAGASLASHPDVDKISFTGSSATGSKIMTTAAQLVKPVSLELGGKSP 266
Query: 452 AIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGS-SVQWEDELVELAKALKVNVG 510
++ D +D V F G+ C+A S + S +V++ D+LV+ A+ +K++
Sbjct: 267 IVVFEDVDLDKVAEWTVFGCFFTNGQICSATSRLIVHESIAVEFVDKLVKWAENIKISDP 326
Query: 511 TDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGY-ENGNFVGPTILRDV 569
+ +GP+VS ++ I +A GA++L GR P + + G FV PTI+ DV
Sbjct: 327 LEEGCRLGPIVSEAQYKKVLNCISSAKSEGATILTGGRR---PEHLKKGYFVEPTIITDV 383
Query: 570 TSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEAR 629
T++M+ ++EE+FGPVL + EEAI + N + G+++ ++ + ++A
Sbjct: 384 TTSMQIWREEVFGPVLAVKTFSTEEEAINLANDTHYGLGSAVMSNDLERCERLSKALQAG 443
Query: 630 LVGINVPVPS----SFSSINESGEFNFCGKSGVQFYTQIKTVAQQWNDLP 675
+V IN PS + I SG G+ G++ Y +K V + +D P
Sbjct: 444 IVWINCAQPSFIQAPWGGIKRSGFGRELGEWGLENYLSVKQVTRYTSDEP 493
>pdb|3EK1|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|B Chain B, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|C Chain C, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|D Chain D, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|E Chain E, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|F Chain F, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|G Chain G, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|H Chain H, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
Length = 504
Score = 184 bits (466), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 137/475 (28%), Positives = 227/475 (47%), Gaps = 14/475 (2%)
Query: 205 FIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQ 264
+ G+++D TI V NPA V VP + K+A+DA+ +A W R
Sbjct: 36 LVNGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALSGWAAKTAKERA 95
Query: 265 RIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVPN 324
I+ K +LI + D +A+ +T EQG L A+ +VL+ +E A G+ +P
Sbjct: 96 GILRKWFDLIIANADDIALIMTSEQGKPLAEARGEVLYAASFIEWFAEEAKRVYGDTIPA 155
Query: 325 ALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILA 384
G R+P+GV A I P+NFP + A+ G T I++P++ P T++ L
Sbjct: 156 PQNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAAPALAAGCTMIVRPADLTPLTALALG 215
Query: 385 ALAMEAGLPDGVLNIVHG-TNDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQ 443
LA +AG+P GVL IV G ++ + ++ ++ +SF S+ + A+ A KR+
Sbjct: 216 VLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCAPTIKRIS 275
Query: 444 SNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV--QWEDELVEL 501
GG I+ DA +DA ++ + + + AG+ C + ++V V ++ ++L
Sbjct: 276 LELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVC-ANRIYVQRGVYDKFAEKLAAK 334
Query: 502 AKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFV 561
K LKV GT+ +GP++ + ++ I++AV GA L+ G+ + G F
Sbjct: 335 VKELKVGNGTEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKEL------GGLFF 388
Query: 562 GPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARK 621
P IL VTS+M KEE FGP+ D+ EE I N F A +T + A +
Sbjct: 389 EPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIAQANDTIFGLAAYFYTENFSRAIR 448
Query: 622 FQNEIEARLVGINVPVPSS----FSSINESGEFNFCGKSGVQFYTQIKTVAQQWN 672
+E +VG N + S+ F + +SG K G++ Y + K + +
Sbjct: 449 VSEALEYGMVGHNTGLISNEVAPFGGVKQSGLGREGSKYGIEEYLETKYICSAYK 503
>pdb|1BI9|A Chain A, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|B Chain B, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|C Chain C, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|D Chain D, Retinal Dehydrogenase Type Two With Nad Bound
Length = 499
Score = 183 bits (464), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 150/493 (30%), Positives = 237/493 (48%), Gaps = 32/493 (6%)
Query: 194 SPNIDNNRVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFP 253
+PN++ FI ++ + V NPAT E +V + AV AA+ AF
Sbjct: 11 TPNLEIKYTKIFINNEWQNSESGRVFPVCNPATGEQVCEVQEADKVDIDKAVQAARLAFS 70
Query: 254 ---AWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGT-TLKAAQRDVLFGLEVVEQ 309
W+ + R R++ KL +L+ RD LA ++ G L+A D+ ++ +
Sbjct: 71 LGSVWRRMDASERGRLLDKLADLVERDRATLATMESLNGGKPFLQAFYIDLQGVIKTLRY 130
Query: 310 ACAVATLQIGEFVPNALCGLDTYCF--REPLGVCAGICPFNFPDMTPLWMFSIAVTCGNT 367
A G +P D + F EP+GVC I P+NFP + W + A+ CGNT
Sbjct: 131 YAGWADKIHGMTIP---VDGDYFTFTRHEPIGVCGQIIPWNFPLLMFTWKIAPALCCGNT 187
Query: 368 FILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGTN-----DVINHICDDEDIKAISFV 422
++KP+E+ P +++ + AL EAG P GV+NI+ G + +HI D+ I+F
Sbjct: 188 VVIKPAEQTPLSALYMGALIKEAGFPPGVVNILPGYGPTAGAAIASHIGIDK----IAFT 243
Query: 423 ASSTASVQMYARAAARG--KRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCT 480
S+ ++ AA R KRV GGK+ II DA +D + F G+ CT
Sbjct: 244 GSTEVG-KLIQEAAGRSNLKRVTLELGGKSPNIIFADADLDYAVEQAHQGVFFNQGQCCT 302
Query: 481 ALSTAVFVGSSVQWE--DELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVD 538
A + +FV S+ E VE AK V D + + GP + + ++I LIQ+ V
Sbjct: 303 A-GSRIFVEESIYEEFVKRSVERAKRRIVGSPFDPTTEQGPQIDKKQYNKILELIQSGVA 361
Query: 539 NGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIK 598
GA L G+ + G+ F+ PT+ +VT +M KEEIFGPV ++ +++E I+
Sbjct: 362 EGAKLECGGKGLGRKGF----FIEPTVFSNVTDDMRIAKEEIFGPVQEILRFKTMDEVIE 417
Query: 599 MVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGIN----VPVPSSFSSINESGEFNFCG 654
N + F A++FT+ A + ++A V IN + S F SG G
Sbjct: 418 RANNSDFGLVAAVFTNDINKALMVSSAMQAGTVWINCYNALNAQSPFGGFKMSGNGREMG 477
Query: 655 KSGVQFYTQIKTV 667
+ G++ Y+++KTV
Sbjct: 478 EFGLREYSEVKTV 490
>pdb|1O9J|A Chain A, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|B Chain B, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|C Chain C, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|D Chain D, The X-Ray Crystal Structure Of Eta-Crystallin
Length = 501
Score = 182 bits (462), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 150/490 (30%), Positives = 229/490 (46%), Gaps = 24/490 (4%)
Query: 196 NIDNNRVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPA- 254
NI FI ++ + T V NPAT+E +V E+ AV AA+ AF
Sbjct: 15 NIKIQHTKLFINNEWHESVSGKTFPVFNPATEEKICEVEEADKEDVDKAVKAAREAFQMG 74
Query: 255 --WKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQ-RDVLFGLEVVEQAC 311
W+ + R ++++KL +LI RD LA ++ G +A D+ + ++ +
Sbjct: 75 SPWRTMDASERGQLIYKLADLIERDRLLLATLESINAGKVFASAYLMDLDYCIKALRYCA 134
Query: 312 AVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILK 371
A G +P +Y EP+GVC I P+N P + A+ CGNT I+K
Sbjct: 135 GWADKIQGRTIP-VDGEFFSYTRHEPIGVCGLIFPWNAPMILLACKIGPALCCGNTVIVK 193
Query: 372 PSEKNPGTSMILAALAMEAGLPDGVLNIVHGTNDVIN-HICDDEDIKAISFVASSTASVQ 430
P+E+ P T++ +A+L EAG P GV+NIV G I D+ ++F S+ +
Sbjct: 194 PAEQTPLTALHVASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVG-K 252
Query: 431 MYARAAARG--KRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFV 488
M AAA+ KRV G KN I+ DA +D+ + F G+ C A S +FV
Sbjct: 253 MIQEAAAKSNLKRVTLELGAKNPCIVFADADLDSAVEFAHQGVFTNQGQSCIAASK-LFV 311
Query: 489 GSSVQWEDELVE--LAKALKVNVGTDASADV--GPVVSVEVKDQISRLIQNAVDNGASLL 544
++ DE V+ + +A K G + V GP ++ ++I LI++ GA L
Sbjct: 312 EEAIY--DEFVQRSVERAKKYVFGNPLTPGVNHGPQINKAQHNKIMELIESGKKEGAKLE 369
Query: 545 LDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNR 604
G P G F+ PT+ +VT +M KEEIFGPV M+ SL+E IK N
Sbjct: 370 CGGG----PWGNKGYFIQPTVFSNVTDDMRIAKEEIFGPVQQIMKFKSLDEVIKRANNTY 425
Query: 605 FVNGASIFTSSGLAARKFQNEIEARLVGINVPVPSSFSS----INESGEFNFCGKSGVQF 660
+ A +FT A + ++A V +N + +S S SG G+ G+
Sbjct: 426 YGLVAGVFTKDLDKAVTVSSALQAGTVWVNCYLAASAQSPAGGFKMSGHGREMGEYGIHE 485
Query: 661 YTQIKTVAQQ 670
YT++KTV +
Sbjct: 486 YTEVKTVTMK 495
>pdb|4FR8|A Chain A, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|B Chain B, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|C Chain C, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|D Chain D, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|E Chain E, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|F Chain F, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|G Chain G, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|H Chain H, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
Length = 500
Score = 181 bits (460), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 152/488 (31%), Positives = 227/488 (46%), Gaps = 26/488 (5%)
Query: 195 PNIDNNRVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPA 254
P + N++ FI ++ D T +NP+T EV QV E+ AV AA+ AF
Sbjct: 15 PEVFCNQI--FINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQL 72
Query: 255 ---WKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGT-TLKAAQRDVLFGLEVVEQA 310
W+ + R R++ +L +LI RD LA T++ G + + D+ L+ +
Sbjct: 73 GSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYY 132
Query: 311 CAVATLQIGEFVPNALCG-LDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFI 369
A G+ +P + G +Y EP+GVC I P+NFP + W A+ GN +
Sbjct: 133 AGWADKYHGKTIP--IDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVV 190
Query: 370 LKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGTNDVIN-HICDDEDIKAISFVASS-TA 427
+K +E+ P T++ +A L EAG P GV+NIV G I ED+ ++F S+
Sbjct: 191 MKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIG 250
Query: 428 SVQMYARAAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVF 487
V A ++ KRV GGK+ IIM DA +D + A F G+ C+A + F
Sbjct: 251 RVIQVAAGSSNLKRVTLQLGGKSPNIIMSDADMDWAVEQAHFALFFNQGQSCSA-GSRTF 309
Query: 488 VGSSVQWEDELVE--LAKALKVNVGT--DASADVGPVVSVEVKDQISRLIQNAVDNGASL 543
V + DE VE +A+A VG D+ + GP V +I I GA L
Sbjct: 310 VQEDIY--DEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKL 367
Query: 544 LLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRN 603
L G GY F+ PT+ DV M KEEIFGPV+ ++ ++EE + N +
Sbjct: 368 LCGGGIAADRGY----FIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNS 423
Query: 604 RFVNGASIFTSSGLAARKFQNEIEARLVGIN----VPVPSSFSSINESGEFNFCGKSGVQ 659
+ A++FT A ++A V +N S F SG G+ G+Q
Sbjct: 424 TYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQ 483
Query: 660 FYTQIKTV 667
YT++KTV
Sbjct: 484 AYTEVKTV 491
>pdb|2ONN|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|B Chain B, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|C Chain C, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|D Chain D, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|E Chain E, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|F Chain F, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|G Chain G, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|H Chain H, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONO|A Chain A, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|B Chain B, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|C Chain C, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|D Chain D, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|E Chain E, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|F Chain F, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|G Chain G, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|H Chain H, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONP|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|B Chain B, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|C Chain C, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|D Chain D, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|E Chain E, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|F Chain F, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|G Chain G, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|H Chain H, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
Length = 500
Score = 179 bits (455), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 152/488 (31%), Positives = 226/488 (46%), Gaps = 26/488 (5%)
Query: 195 PNIDNNRVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPA 254
P + N++ FI ++ D T +NP+T EV QV E+ AV AA+ AF
Sbjct: 15 PEVFCNQI--FINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQL 72
Query: 255 ---WKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGT-TLKAAQRDVLFGLEVVEQA 310
W+ + R R++ +L +LI RD LA T++ G + + D+ L+ +
Sbjct: 73 GSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYY 132
Query: 311 CAVATLQIGEFVPNALCG-LDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFI 369
A G+ +P + G +Y EP+GVC I P+NFP + W A+ GN +
Sbjct: 133 AGWADKYHGKTIP--IDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVV 190
Query: 370 LKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGTNDVIN-HICDDEDIKAISFVASS-TA 427
+K +E+ P T++ +A L EAG P GV+NIV G I ED+ ++F S+
Sbjct: 191 MKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIG 250
Query: 428 SVQMYARAAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVF 487
V A ++ KRV GGK+ IIM DA +D + A F G+ C A + F
Sbjct: 251 RVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCA-GSRTF 309
Query: 488 VGSSVQWEDELVE--LAKALKVNVGT--DASADVGPVVSVEVKDQISRLIQNAVDNGASL 543
V + DE VE +A+A VG D+ + GP V +I I GA L
Sbjct: 310 VQEDIY--DEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKL 367
Query: 544 LLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRN 603
L G GY F+ PT+ DV M KEEIFGPV+ ++ ++EE + N +
Sbjct: 368 LCGGGIAADRGY----FIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNS 423
Query: 604 RFVNGASIFTSSGLAARKFQNEIEARLVGIN----VPVPSSFSSINESGEFNFCGKSGVQ 659
+ A++FT A ++A V +N S F SG G+ G+Q
Sbjct: 424 TYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGQELGEYGLQ 483
Query: 660 FYTQIKTV 667
YT++KTV
Sbjct: 484 AYTEVKTV 491
>pdb|1CW3|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|2VLE|A Chain A, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|B Chain B, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|C Chain C, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|D Chain D, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|E Chain E, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|F Chain F, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|G Chain G, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|H Chain H, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
Length = 494
Score = 179 bits (455), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 152/488 (31%), Positives = 226/488 (46%), Gaps = 26/488 (5%)
Query: 195 PNIDNNRVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPA 254
P + N++ FI ++ D T +NP+T EV QV E+ AV AA+ AF
Sbjct: 9 PEVFCNQI--FINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQL 66
Query: 255 ---WKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGT-TLKAAQRDVLFGLEVVEQA 310
W+ + R R++ +L +LI RD LA T++ G + + D+ L+ +
Sbjct: 67 GSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYY 126
Query: 311 CAVATLQIGEFVPNALCG-LDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFI 369
A G+ +P + G +Y EP+GVC I P+NFP + W A+ GN +
Sbjct: 127 AGWADKYHGKTIP--IDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVV 184
Query: 370 LKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGTNDVIN-HICDDEDIKAISFVASS-TA 427
+K +E+ P T++ +A L EAG P GV+NIV G I ED+ ++F S+
Sbjct: 185 MKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIG 244
Query: 428 SVQMYARAAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVF 487
V A ++ KRV GGK+ IIM DA +D + A F G+ C A + F
Sbjct: 245 RVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCA-GSRTF 303
Query: 488 VGSSVQWEDELVE--LAKALKVNVGT--DASADVGPVVSVEVKDQISRLIQNAVDNGASL 543
V + DE VE +A+A VG D+ + GP V +I I GA L
Sbjct: 304 VQEDIY--DEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKL 361
Query: 544 LLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRN 603
L G GY F+ PT+ DV M KEEIFGPV+ ++ ++EE + N +
Sbjct: 362 LCGGGIAADRGY----FIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNS 417
Query: 604 RFVNGASIFTSSGLAARKFQNEIEARLVGIN----VPVPSSFSSINESGEFNFCGKSGVQ 659
+ A++FT A ++A V +N S F SG G+ G+Q
Sbjct: 418 TYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQ 477
Query: 660 FYTQIKTV 667
YT++KTV
Sbjct: 478 AYTEVKTV 485
>pdb|1O05|A Chain A, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|B Chain B, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|C Chain C, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|D Chain D, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|E Chain E, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|F Chain F, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|G Chain G, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|H Chain H, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1NZX|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZZ|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1O00|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O01|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O02|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|3INJ|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3SZ9|A Chain A, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|B Chain B, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|C Chain C, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|D Chain D, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|E Chain E, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|F Chain F, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|G Chain G, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|H Chain H, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|4FQF|A Chain A, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|B Chain B, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|C Chain C, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|D Chain D, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
Length = 500
Score = 179 bits (455), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 152/488 (31%), Positives = 226/488 (46%), Gaps = 26/488 (5%)
Query: 195 PNIDNNRVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPA 254
P + N++ FI ++ D T +NP+T EV QV E+ AV AA+ AF
Sbjct: 15 PEVFCNQI--FINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQL 72
Query: 255 ---WKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGT-TLKAAQRDVLFGLEVVEQA 310
W+ + R R++ +L +LI RD LA T++ G + + D+ L+ +
Sbjct: 73 GSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYY 132
Query: 311 CAVATLQIGEFVPNALCG-LDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFI 369
A G+ +P + G +Y EP+GVC I P+NFP + W A+ GN +
Sbjct: 133 AGWADKYHGKTIP--IDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVV 190
Query: 370 LKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGTNDVIN-HICDDEDIKAISFVASS-TA 427
+K +E+ P T++ +A L EAG P GV+NIV G I ED+ ++F S+
Sbjct: 191 MKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIG 250
Query: 428 SVQMYARAAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVF 487
V A ++ KRV GGK+ IIM DA +D + A F G+ C A + F
Sbjct: 251 RVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCA-GSRTF 309
Query: 488 VGSSVQWEDELVE--LAKALKVNVGT--DASADVGPVVSVEVKDQISRLIQNAVDNGASL 543
V + DE VE +A+A VG D+ + GP V +I I GA L
Sbjct: 310 VQEDIY--DEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKL 367
Query: 544 LLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRN 603
L G GY F+ PT+ DV M KEEIFGPV+ ++ ++EE + N +
Sbjct: 368 LCGGGIAADRGY----FIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNS 423
Query: 604 RFVNGASIFTSSGLAARKFQNEIEARLVGIN----VPVPSSFSSINESGEFNFCGKSGVQ 659
+ A++FT A ++A V +N S F SG G+ G+Q
Sbjct: 424 TYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQ 483
Query: 660 FYTQIKTV 667
YT++KTV
Sbjct: 484 AYTEVKTV 491
>pdb|3N81|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N82|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N83|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
Length = 500
Score = 179 bits (455), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 152/488 (31%), Positives = 226/488 (46%), Gaps = 26/488 (5%)
Query: 195 PNIDNNRVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPA 254
P + N++ FI ++ D T +NP+T EV QV E+ AV AA+ AF
Sbjct: 15 PEVFCNQI--FINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQL 72
Query: 255 ---WKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGT-TLKAAQRDVLFGLEVVEQA 310
W+ + R R++ +L +LI RD LA T++ G + + D+ L+ +
Sbjct: 73 GSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYY 132
Query: 311 CAVATLQIGEFVPNALCG-LDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFI 369
A G+ +P + G +Y EP+GVC I P+NFP + W A+ GN +
Sbjct: 133 AGWADKYHGKTIP--IDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVV 190
Query: 370 LKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGTNDVIN-HICDDEDIKAISFVASS-TA 427
+K +E+ P T++ +A L EAG P GV+NIV G I ED+ ++F S+
Sbjct: 191 MKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFAGSTEIG 250
Query: 428 SVQMYARAAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVF 487
V A ++ KRV GGK+ IIM DA +D + A F G+ C A + F
Sbjct: 251 RVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCA-GSRTF 309
Query: 488 VGSSVQWEDELVE--LAKALKVNVGT--DASADVGPVVSVEVKDQISRLIQNAVDNGASL 543
V + DE VE +A+A VG D+ + GP V +I I GA L
Sbjct: 310 VQEDIY--DEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKL 367
Query: 544 LLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRN 603
L G GY F+ PT+ DV M KEEIFGPV+ ++ ++EE + N +
Sbjct: 368 LCGGGIAADRGY----FIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNS 423
Query: 604 RFVNGASIFTSSGLAARKFQNEIEARLVGIN----VPVPSSFSSINESGEFNFCGKSGVQ 659
+ A++FT A ++A V +N S F SG G+ G+Q
Sbjct: 424 TYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQ 483
Query: 660 FYTQIKTV 667
YT++KTV
Sbjct: 484 AYTEVKTV 491
>pdb|1NZW|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|B Chain B, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|C Chain C, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|D Chain D, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|E Chain E, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|F Chain F, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|G Chain G, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|H Chain H, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1O04|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|B Chain B, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|C Chain C, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|D Chain D, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|E Chain E, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|F Chain F, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|G Chain G, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|H Chain H, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
Length = 500
Score = 179 bits (454), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 151/488 (30%), Positives = 226/488 (46%), Gaps = 26/488 (5%)
Query: 195 PNIDNNRVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPA 254
P + N++ FI ++ D T +NP+T EV QV E+ AV AA+ AF
Sbjct: 15 PEVFCNQI--FINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQL 72
Query: 255 ---WKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGT-TLKAAQRDVLFGLEVVEQA 310
W+ + R R++ +L +LI RD LA T++ G + + D+ L+ +
Sbjct: 73 GSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYY 132
Query: 311 CAVATLQIGEFVPNALCG-LDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFI 369
A G+ +P + G +Y EP+GVC I P+NFP + W A+ GN +
Sbjct: 133 AGWADKYHGKTIP--IDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVV 190
Query: 370 LKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGTNDVIN-HICDDEDIKAISFVASS-TA 427
+K +E+ P T++ +A L EAG P GV+NIV G I ED+ ++F S+
Sbjct: 191 MKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIG 250
Query: 428 SVQMYARAAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVF 487
V A ++ KRV GGK+ IIM DA +D + A F G+ C+ + F
Sbjct: 251 RVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQ-CSCAGSRTF 309
Query: 488 VGSSVQWEDELVE--LAKALKVNVGT--DASADVGPVVSVEVKDQISRLIQNAVDNGASL 543
V + DE VE +A+A VG D+ + GP V +I I GA L
Sbjct: 310 VQEDIY--DEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKL 367
Query: 544 LLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRN 603
L G GY F+ PT+ DV M KEEIFGPV+ ++ ++EE + N +
Sbjct: 368 LCGGGIAADRGY----FIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNS 423
Query: 604 RFVNGASIFTSSGLAARKFQNEIEARLVGIN----VPVPSSFSSINESGEFNFCGKSGVQ 659
+ A++FT A ++A V +N S F SG G+ G+Q
Sbjct: 424 TYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQ 483
Query: 660 FYTQIKTV 667
YT++KTV
Sbjct: 484 AYTEVKTV 491
>pdb|3N80|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
Length = 500
Score = 179 bits (453), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 151/488 (30%), Positives = 225/488 (46%), Gaps = 26/488 (5%)
Query: 195 PNIDNNRVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPA 254
P + N++ FI ++ D T +NP+T EV QV E+ AV AA+ AF
Sbjct: 15 PEVFCNQI--FINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQL 72
Query: 255 ---WKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGT-TLKAAQRDVLFGLEVVEQA 310
W+ + R R++ +L +LI RD LA T++ G + + D+ L+ +
Sbjct: 73 GSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYY 132
Query: 311 CAVATLQIGEFVPNALCG-LDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFI 369
A G+ +P + G +Y EP+GVC I P+NFP + W A+ GN +
Sbjct: 133 AGWADKYHGKTIP--IDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVV 190
Query: 370 LKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGTNDVIN-HICDDEDIKAISFVASS-TA 427
+K +E+ P T++ +A L EAG P GV+NIV G I ED+ ++F S+
Sbjct: 191 MKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIG 250
Query: 428 SVQMYARAAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVF 487
V A ++ KRV GGK+ IIM DA +D + A F G+ C + F
Sbjct: 251 RVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQ-CXCAGSRTF 309
Query: 488 VGSSVQWEDELVE--LAKALKVNVGT--DASADVGPVVSVEVKDQISRLIQNAVDNGASL 543
V + DE VE +A+A VG D+ + GP V +I I GA L
Sbjct: 310 VQEDIY--DEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKL 367
Query: 544 LLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRN 603
L G GY F+ PT+ DV M KEEIFGPV+ ++ ++EE + N +
Sbjct: 368 LCGGGIAADRGY----FIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNS 423
Query: 604 RFVNGASIFTSSGLAARKFQNEIEARLVGIN----VPVPSSFSSINESGEFNFCGKSGVQ 659
+ A++FT A ++A V +N S F SG G+ G+Q
Sbjct: 424 TYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQ 483
Query: 660 FYTQIKTV 667
YT++KTV
Sbjct: 484 AYTEVKTV 491
>pdb|3ED6|A Chain A, 1.7 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
pdb|3ED6|B Chain B, 1.7 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
pdb|3FG0|A Chain A, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|B Chain B, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|C Chain C, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|D Chain D, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|E Chain E, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|F Chain F, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|G Chain G, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|H Chain H, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
Length = 520
Score = 178 bits (452), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 124/466 (26%), Positives = 236/466 (50%), Gaps = 10/466 (2%)
Query: 205 FIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPA--WKNTPVAT 262
+I G++V+ T D+INP QEV V T E+ + A+ AA+RAF + W T
Sbjct: 36 YIDGEWVESANKNTRDIINPYNQEVIFTVSEGTKEDAERAILAARRAFESGEWSQETAET 95
Query: 263 RQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFV 322
R + + + + I+ + LA T++ G TL+ + D+ V +A GE +
Sbjct: 96 RGKKVRAIADKIKEHREALARLETLDTGKTLEESYADMDDIHNVFMYFAGLADKDGGEMI 155
Query: 323 PNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMI 382
+ + ++ +EP+GV I P+N+P + W + A+ G + ++KPSE P T++
Sbjct: 156 DSPIPDTESKIVKEPVGVVTQITPWNYPLLQASWKIAPALATGCSLVMKPSEITPLTTIR 215
Query: 383 LAALAMEAGLPDGVLNIVHGT-NDVINHICDDEDIKAISFVASSTASVQMYARAAARGKR 441
+ L E G P G +N++ G ++V + + +++ +SF + AA
Sbjct: 216 VFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIMKNAANNVTN 275
Query: 442 VQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQ--WEDELV 499
+ GGKN II DA + ++ ++ G+ AG+ C+A + + V +S++ +E L+
Sbjct: 276 IALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSA-GSRILVQNSIKDKFEQALI 334
Query: 500 ELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGN 559
+ K +K+ G DA ++GPV+S E +++I + A GA++ + G+ ++G
Sbjct: 335 DRVKKIKLGNGFDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGL 394
Query: 560 FVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAA 619
F PT++ + ++M +EE+FGPV+ ++ +EAI++ N + + ++F+ A
Sbjct: 395 FFEPTVITNCDTSMRIVQEEVFGPVVTVEGFETEQEAIQLANDSIYGLAGAVFSKDIGKA 454
Query: 620 RKFQNEIEARLVGINVPVP----SSFSSINESGEFNFCGKSGVQFY 661
++ N+++ V IN P + + +SG GK G++ Y
Sbjct: 455 QRVANKLKLGTVWINDFHPYFAQAPWGGYKQSGIGRELGKEGLEEY 500
>pdb|3RHM|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|B Chain B, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|C Chain C, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|D Chain D, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHO|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|B Chain B, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|C Chain C, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|D Chain D, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
Length = 517
Score = 175 bits (444), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 135/486 (27%), Positives = 228/486 (46%), Gaps = 27/486 (5%)
Query: 205 FIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFP--AWKNTPVAT 262
FIGG+FVD GS T + INP V QV L + AV AAK AF W
Sbjct: 40 FIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARD 99
Query: 263 RQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQR-DVLFGLEVVEQACAV------AT 315
R R++++L +++ + ++LA ++ G A + V ++ AT
Sbjct: 100 RGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGAT 159
Query: 316 LQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEK 375
+ I + PN L +EP+GVC + P+N+P M W + + GNT ++KP++
Sbjct: 160 IPINQARPNRNLTLTK---KEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQV 216
Query: 376 NPGTSMILAALAMEAGLPDGVLNIVHGTNDVINH-ICDDEDIKAISFVASSTASVQ-MYA 433
P T++ A L ++AG+P GV+NI+ G+ ++ + D D++ I F S+ M +
Sbjct: 217 TPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKS 276
Query: 434 RAAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV- 492
A + K+V GGK+ II D ++ + +S+ F GE C A + +FV S+
Sbjct: 277 CALSNVKKVSLQLGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIA-AGRLFVEESIH 335
Query: 493 -QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIV 551
Q+ ++VE + +K+ + + GP ++ Q V GA+L+ G +
Sbjct: 336 NQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVP 395
Query: 552 VPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLL--NMQADSLEEAIKMVNRNRFVNGA 609
PG+ F PT+ DV +M KEE FGP+++ ++ + N F +
Sbjct: 396 RPGF----FFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLAS 451
Query: 610 SIFTSSGLAARKFQNEIEARLVGIN----VPVPSSFSSINESGEFNFCGKSGVQFYTQIK 665
+FT A ++++A V IN V + F +SG G++ + Y +IK
Sbjct: 452 GVFTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIK 511
Query: 666 TVAQQW 671
TV ++
Sbjct: 512 TVTFEY 517
>pdb|2O2P|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|B Chain B, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|C Chain C, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|D Chain D, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2Q|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|B Chain B, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|C Chain C, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|D Chain D, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2R|A Chain A, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|B Chain B, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|C Chain C, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|D Chain D, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|4GO2|A Chain A, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|B Chain B, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|C Chain C, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|D Chain D, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
Length = 517
Score = 175 bits (443), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 135/486 (27%), Positives = 228/486 (46%), Gaps = 27/486 (5%)
Query: 205 FIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFP--AWKNTPVAT 262
FIGG+FVD GS T + INP V QV L + AV AAK AF W
Sbjct: 40 FIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARD 99
Query: 263 RQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQR-DVLFGLEVVEQACAV------AT 315
R R++++L +++ + ++LA ++ G A + V ++ AT
Sbjct: 100 RGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGAT 159
Query: 316 LQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEK 375
+ I + PN L +EP+GVC + P+N+P M W + + GNT ++KP++
Sbjct: 160 IPINQARPNRNLTLTK---KEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQV 216
Query: 376 NPGTSMILAALAMEAGLPDGVLNIVHGTNDVINH-ICDDEDIKAISFVASSTASVQ-MYA 433
P T++ A L ++AG+P GV+NI+ G+ ++ + D D++ I F S+ M +
Sbjct: 217 TPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKS 276
Query: 434 RAAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV- 492
A + K+V GGK+ II D ++ + +S+ F GE C A + +FV S+
Sbjct: 277 CALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIA-AGRLFVEESIH 335
Query: 493 -QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIV 551
Q+ ++VE + +K+ + + GP ++ Q V GA+L+ G +
Sbjct: 336 NQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVP 395
Query: 552 VPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLL--NMQADSLEEAIKMVNRNRFVNGA 609
PG+ F PT+ DV +M KEE FGP+++ ++ + N F +
Sbjct: 396 RPGF----FFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLAS 451
Query: 610 SIFTSSGLAARKFQNEIEARLVGIN----VPVPSSFSSINESGEFNFCGKSGVQFYTQIK 665
+FT A ++++A V IN V + F +SG G++ + Y +IK
Sbjct: 452 GVFTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIK 511
Query: 666 TVAQQW 671
TV ++
Sbjct: 512 TVTFEY 517
>pdb|3I44|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From
Bartonella Henselae At 2.0a Resolution
Length = 497
Score = 174 bits (442), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 142/492 (28%), Positives = 235/492 (47%), Gaps = 43/492 (8%)
Query: 200 NRVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTP 259
N+ +I G + D + VI+P+T+E + + L + + A++AAK+AF WK T
Sbjct: 24 NKRKFYINGLWDDPSTPHDLYVIDPSTEEACAVISLGSTRDADKAINAAKKAFQTWKTTS 83
Query: 260 VATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIG 319
R + K+ E+ + +A I++E G + A + A + I
Sbjct: 84 PHERLGFVEKILEIYEKRSSDMAKTISMEMGAPIDMA----------LNAQTATGSSHIR 133
Query: 320 EFVPNALCGLDTYCFREPL--------------GVCAGICPFNFPDMTPLWMFSI-AVTC 364
F+ + F+E L GV I P+N+P M + + I A+
Sbjct: 134 NFIK----AYKEFSFQEALIEGNEQAILHYDAIGVVGLITPWNWP-MNQVTLKVIPALLA 188
Query: 365 GNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGTN-DVINHICDDEDIKAISFVA 423
G T +LKPSE P ++M+ A + EA LP GV N+++G +V +++ D++ ISF
Sbjct: 189 GCTMVLKPSEIAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTG 248
Query: 424 SSTASVQMYARAAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALS 483
S+ A + A+ KRV GGK II DA IDA L V F +G+ C A
Sbjct: 249 STRAGKDISKNASNTLKRVCLELGGKGANIIFADADIDA-LQRGVRHCFYNSGQSCNA-P 306
Query: 484 TAVFVGSSVQWEDELVELAKAL----KVNVGTDASADVGPVVSVEVKDQISRLIQNAVDN 539
T + V ++ D+ ++ AK + +V G +GPVVS E D+I LIQ+ +D
Sbjct: 307 TRMLVEQAIY--DKAIKTAKDIAEKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGIDE 364
Query: 540 GASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKM 599
GA+L+ G + + G E G +V PT+ DV +M ++EEIFGPVL + ++ +EA+ +
Sbjct: 365 GATLVTGGTGLPM-GMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNTEDEAVTL 423
Query: 600 VNRNRFVNGASIFTSSGLAARKFQNEIEARLVGIN---VPVPSSFSSINESGEFNFCGKS 656
N + I + R+ ++ + +V +N +P S F + SG G
Sbjct: 424 ANDTEYGLTNYIQSQDRSKCRRIAAQVRSGMVEVNGHELPGGSYFGGVKFSGRAREGGLW 483
Query: 657 GVQFYTQIKTVA 668
G++ + K ++
Sbjct: 484 GIKEFLDTKAIS 495
>pdb|3RHJ|A Chain A, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|B Chain B, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|C Chain C, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|D Chain D, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
Length = 517
Score = 174 bits (442), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 135/486 (27%), Positives = 228/486 (46%), Gaps = 27/486 (5%)
Query: 205 FIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFP--AWKNTPVAT 262
FIGG+FVD GS T + INP V QV L + AV AAK AF W
Sbjct: 40 FIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARD 99
Query: 263 RQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQR-DVLFGLEVVEQACAV------AT 315
R R++++L +++ + ++LA ++ G A + V ++ AT
Sbjct: 100 RGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGAT 159
Query: 316 LQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEK 375
+ I + PN L +EP+GVC + P+N+P M W + + GNT ++KP++
Sbjct: 160 IPINQARPNRNLTLTK---KEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQV 216
Query: 376 NPGTSMILAALAMEAGLPDGVLNIVHGTNDVINH-ICDDEDIKAISFVASSTASVQ-MYA 433
P T++ A L ++AG+P GV+NI+ G+ ++ + D D++ I F S+ M +
Sbjct: 217 TPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKS 276
Query: 434 RAAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV- 492
A + K+V GGK+ II D ++ + +S+ F GE C A + +FV S+
Sbjct: 277 CALSNVKKVSLALGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIA-AGRLFVEESIH 335
Query: 493 -QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIV 551
Q+ ++VE + +K+ + + GP ++ Q V GA+L+ G +
Sbjct: 336 NQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVP 395
Query: 552 VPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLL--NMQADSLEEAIKMVNRNRFVNGA 609
PG+ F PT+ DV +M KEE FGP+++ ++ + N F +
Sbjct: 396 RPGF----FFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLAS 451
Query: 610 SIFTSSGLAARKFQNEIEARLVGIN----VPVPSSFSSINESGEFNFCGKSGVQFYTQIK 665
+FT A ++++A V IN V + F +SG G++ + Y +IK
Sbjct: 452 GVFTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIK 511
Query: 666 TVAQQW 671
TV ++
Sbjct: 512 TVTFEY 517
>pdb|3PQA|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|B Chain B, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|C Chain C, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|D Chain D, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3RHD|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|B Chain B, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|C Chain C, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|D Chain D, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
Length = 486
Score = 172 bits (436), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 141/486 (29%), Positives = 233/486 (47%), Gaps = 51/486 (10%)
Query: 205 FIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQ 264
FI GK+++ +DVINP + EV ++P + EE K+A+D A++ KN P+ R
Sbjct: 3 FIDGKWIN---REDMDVINPYSLEVIKKIPALSREEAKEAIDTAEKYKEVMKNLPITKRY 59
Query: 265 RIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVPN 324
I+ + + I+ ++LA + ++ G +K A+ +V + + A E +P+
Sbjct: 60 NILMNIAKQIKEKKEELAKILAIDAGKPIKQARVEVERSIGTFKLAAFYVKEHRDEVIPS 119
Query: 325 ALCGLDTYCF--REPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMI 382
D F REP+G+ I PFNFP + A+ GN + PS K P +
Sbjct: 120 D----DRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPAIATGNVIVHHPSSKAPLVCIE 175
Query: 383 LAALAMEA----GLPDGVLNIVHGTNDVI-NHICDDEDIKAISFVASSTASVQMYARAAA 437
LA + A +P GV N++ G +V+ + I +E + ISF SS + +A
Sbjct: 176 LAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAGF 235
Query: 438 RGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWEDE 497
K++ GG N I++ DA ++ +NAL+ F AG+ C ++ + V S+ D+
Sbjct: 236 --KKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGM-ILVDESIA--DK 290
Query: 498 LVEL----AKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVP 553
+E+ AK L V D DVGP++SVE + + ++++ A+D G LLL G+
Sbjct: 291 FIEMFVNKAKVLNVGNPLDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGK----- 345
Query: 554 GYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFT 613
+ PTIL N+ C K E F PV+ ++ + EE I + N + ++IFT
Sbjct: 346 --RDKALFYPTILEVDRDNILC-KTETFAPVIPIIRTNE-EEMIDIANSTEYGLHSAIFT 401
Query: 614 SSGLAARKFQNEIEARLVGINVPVPSS--------FSSINESGEFNFCGKSGVQF----Y 661
+ + KF +E V IN SS F + +SG G+ GV++
Sbjct: 402 NDINKSLKFAENLEFGGVVIN---DSSLFRQDNMPFGGVKKSG----LGREGVKYAMEEM 454
Query: 662 TQIKTV 667
+ IKT+
Sbjct: 455 SNIKTI 460
>pdb|3RHR|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|B Chain B, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|C Chain C, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|D Chain D, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHP|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|B Chain B, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|C Chain C, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|D Chain D, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHQ|A Chain A, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|B Chain B, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|C Chain C, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|D Chain D, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
Length = 517
Score = 171 bits (433), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 134/486 (27%), Positives = 227/486 (46%), Gaps = 27/486 (5%)
Query: 205 FIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFP--AWKNTPVAT 262
FIGG+FVD GS T + INP V QV L + AV AAK AF W
Sbjct: 40 FIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARD 99
Query: 263 RQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQR-DVLFGLEVVEQACAV------AT 315
R R++++L +++ + ++LA ++ G A + V ++ AT
Sbjct: 100 RGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGAT 159
Query: 316 LQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEK 375
+ I + PN L +EP+GVC + P+N+P M W + + GNT ++KP++
Sbjct: 160 IPINQARPNRNLTLTK---KEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQV 216
Query: 376 NPGTSMILAALAMEAGLPDGVLNIVHGTNDVINH-ICDDEDIKAISFVASSTASVQ-MYA 433
P T++ A L ++AG+P GV+NI+ G+ ++ + D D++ I F S+ M +
Sbjct: 217 TPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKS 276
Query: 434 RAAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV- 492
A + K+V GGK+ II D ++ + +S+ F GE A + +FV S+
Sbjct: 277 CALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENAIA-AGRLFVEESIH 335
Query: 493 -QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIV 551
Q+ ++VE + +K+ + + GP ++ Q V GA+L+ G +
Sbjct: 336 NQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVP 395
Query: 552 VPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLL--NMQADSLEEAIKMVNRNRFVNGA 609
PG+ F PT+ DV +M KEE FGP+++ ++ + N F +
Sbjct: 396 RPGF----FFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLAS 451
Query: 610 SIFTSSGLAARKFQNEIEARLVGIN----VPVPSSFSSINESGEFNFCGKSGVQFYTQIK 665
+FT A ++++A V IN V + F +SG G++ + Y +IK
Sbjct: 452 GVFTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIK 511
Query: 666 TVAQQW 671
TV ++
Sbjct: 512 TVTFEY 517
>pdb|1ZUM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|I Chain I, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|J Chain J, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|K Chain K, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|L Chain L, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|2ONM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|I Chain I, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|J Chain J, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|K Chain K, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|L Chain L, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
Length = 500
Score = 171 bits (433), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 148/482 (30%), Positives = 220/482 (45%), Gaps = 26/482 (5%)
Query: 195 PNIDNNRVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPA 254
P + N++ FI ++ D T +NP+T EV QV E+ AV AA+ AF
Sbjct: 15 PEVFCNQI--FINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQL 72
Query: 255 ---WKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGT-TLKAAQRDVLFGLEVVEQA 310
W+ + R R++ +L +LI RD LA T++ G + + D+ L+ +
Sbjct: 73 GSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYY 132
Query: 311 CAVATLQIGEFVPNALCG-LDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFI 369
A G+ +P + G +Y EP+GVC I P+NFP + W A+ GN +
Sbjct: 133 AGWADKYHGKTIP--IDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVV 190
Query: 370 LKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGTNDVIN-HICDDEDIKAISFVASS-TA 427
+K +E+ P T++ +A L EAG P GV+NIV G I ED+ ++F S+
Sbjct: 191 MKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIG 250
Query: 428 SVQMYARAAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVF 487
V A ++ KRV GGK+ IIM DA +D + A F G+ C A + F
Sbjct: 251 RVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCA-GSRTF 309
Query: 488 VGSSVQWEDELVE--LAKALKVNVGT--DASADVGPVVSVEVKDQISRLIQNAVDNGASL 543
V + DE VE +A+A VG D+ + GP V +I I GA L
Sbjct: 310 VQEDIY--DEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKL 367
Query: 544 LLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRN 603
L G GY F+ PT+ DV M KEEIFGPV+ ++ ++EE + N +
Sbjct: 368 LCGGGIAADRGY----FIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNS 423
Query: 604 RFVNGASIFTSSGLAARKFQNEIEARLVGIN----VPVPSSFSSINESGEFNFCGKSGVQ 659
+ A++FT A ++A V +N S F SG G+ G+Q
Sbjct: 424 TYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQ 483
Query: 660 FY 661
Y
Sbjct: 484 AY 485
>pdb|3IFG|A Chain A, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|B Chain B, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|C Chain C, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|D Chain D, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|E Chain E, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|F Chain F, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|G Chain G, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|H Chain H, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|I Chain I, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|J Chain J, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|K Chain K, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|L Chain L, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|M Chain M, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|N Chain N, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|O Chain O, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|P Chain P, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFH|Q Chain Q, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|R Chain R, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|S Chain S, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|T Chain T, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|U Chain U, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|V Chain V, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|W Chain W, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|X Chain X, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|Y Chain Y, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|Z Chain Z, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|1 Chain 1, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|2 Chain 2, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|3 Chain 3, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|4 Chain 4, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|5 Chain 5, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|6 Chain 6, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
Length = 484
Score = 171 bits (433), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 130/472 (27%), Positives = 221/472 (46%), Gaps = 12/472 (2%)
Query: 201 RVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPV 260
R +IGG++ AT +V +PAT E VP E A++AA+ A+ W+
Sbjct: 12 RHQAYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWAGWRMKTA 71
Query: 261 ATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGE 320
R I+ + +L+ + D LA+ +T EQG L A+ ++ + +E G+
Sbjct: 72 KERAAILRRWFDLVIANSDDLALILTTEQGKPLAEAKGEIAYAASFIEWFAEEGKRVAGD 131
Query: 321 FVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTS 380
+P +EP+GVCA I P+NFP A+ G ++KP+E P ++
Sbjct: 132 TLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARKVGPALAAGCPIVVKPAESTPFSA 191
Query: 381 MILAALAMEAGLPDGVLNIVHGTNDVIN-HICDDEDIKAISFVASSTASVQMYARAAARG 439
+ +A LA AG+P GVL++V G I I + ++ +SF S+ + A++A
Sbjct: 192 LAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSAPTV 251
Query: 440 KRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV--QWEDE 497
K++ GG I+ DA +DA + +++ + G+ C + FV V + D+
Sbjct: 252 KKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVC-TNRFFVHERVYDAFADK 310
Query: 498 LVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYEN 557
L LKV GT++ A +GP+++ ++ I +A+ GASL+ G+ +
Sbjct: 311 LAAAVSKLKVGRGTESGATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHAL----G 366
Query: 558 GNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGL 617
F PT+L V +M+ KEE FGP+ + S EE +++ N F A +++
Sbjct: 367 HGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVRLANDTEFGLAAYLYSRDIG 426
Query: 618 AARKFQNEIEARLVGINVPVPSS----FSSINESGEFNFCGKSGVQFYTQIK 665
+ +E +VGIN + S+ F + +SG G+ Y IK
Sbjct: 427 RVWRVAEALEYGMVGINTGLISNEVAPFGGVKQSGLGREGSHYGIDDYVVIK 478
>pdb|4GNZ|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|B Chain B, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|C Chain C, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|D Chain D, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GO0|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|B Chain B, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|C Chain C, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|D Chain D, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
Length = 517
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 134/486 (27%), Positives = 227/486 (46%), Gaps = 27/486 (5%)
Query: 205 FIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFP--AWKNTPVAT 262
FIGG+FVD GS T + INP V QV L + AV AAK AF W
Sbjct: 40 FIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARD 99
Query: 263 RQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQR-DVLFGLEVVEQACAV------AT 315
R R++++L +++ + ++LA ++ G A + V ++ AT
Sbjct: 100 RGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGAT 159
Query: 316 LQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEK 375
+ I + PN L +EP+GVC + P+N+P M W + + GNT ++KP++
Sbjct: 160 IPINQARPNRNLTLTK---KEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQV 216
Query: 376 NPGTSMILAALAMEAGLPDGVLNIVHGTNDVINH-ICDDEDIKAISFVASSTASVQ-MYA 433
P T++ A L ++AG+P GV+NI+ G+ ++ + D D++ I F S+ M +
Sbjct: 217 TPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKS 276
Query: 434 RAAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV- 492
A + K+V GGK+ II D ++ + +S+ F GE A + +FV S+
Sbjct: 277 CALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENSIA-AGRLFVEESIH 335
Query: 493 -QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIV 551
Q+ ++VE + +K+ + + GP ++ Q V GA+L+ G +
Sbjct: 336 NQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVP 395
Query: 552 VPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLL--NMQADSLEEAIKMVNRNRFVNGA 609
PG+ F PT+ DV +M KEE FGP+++ ++ + N F +
Sbjct: 396 RPGF----FFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLAS 451
Query: 610 SIFTSSGLAARKFQNEIEARLVGIN----VPVPSSFSSINESGEFNFCGKSGVQFYTQIK 665
+FT A ++++A V IN V + F +SG G++ + Y +IK
Sbjct: 452 GVFTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIK 511
Query: 666 TVAQQW 671
TV ++
Sbjct: 512 TVTFEY 517
>pdb|3INL|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
Length = 500
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 147/482 (30%), Positives = 220/482 (45%), Gaps = 26/482 (5%)
Query: 195 PNIDNNRVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPA 254
P + N++ FI ++ D T +NP+T EV QV E+ AV AA+ AF
Sbjct: 15 PEVFCNQI--FINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQL 72
Query: 255 ---WKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGT-TLKAAQRDVLFGLEVVEQA 310
W+ + R R++ +L +LI RD LA T++ G + + D+ L+ +
Sbjct: 73 GSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYY 132
Query: 311 CAVATLQIGEFVPNALCG-LDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFI 369
A G+ +P + G +Y EP+GVC I P+NFP + W A+ GN +
Sbjct: 133 AGWADKYHGKTIP--IDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVV 190
Query: 370 LKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGTNDVIN-HICDDEDIKAISFVASS-TA 427
+K +E+ P T++ +A L EAG P GV+NIV G I ED+ ++F S+
Sbjct: 191 MKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIG 250
Query: 428 SVQMYARAAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVF 487
V A ++ KRV GGK+ IIM DA +D + A F G+ C+ + F
Sbjct: 251 RVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQ-CSCAGSRTF 309
Query: 488 VGSSVQWEDELVE--LAKALKVNVGT--DASADVGPVVSVEVKDQISRLIQNAVDNGASL 543
V + DE VE +A+A VG D+ + GP V +I I GA L
Sbjct: 310 VQEDIY--DEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKL 367
Query: 544 LLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRN 603
L G GY F+ PT+ DV M KEEIFGPV+ ++ ++EE + N +
Sbjct: 368 LCGGGIAADRGY----FIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNS 423
Query: 604 RFVNGASIFTSSGLAARKFQNEIEARLVGIN----VPVPSSFSSINESGEFNFCGKSGVQ 659
+ A++FT A ++A V +N S F SG G+ G+Q
Sbjct: 424 TYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQ 483
Query: 660 FY 661
Y
Sbjct: 484 AY 485
>pdb|3RHL|A Chain A, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|B Chain B, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|C Chain C, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|D Chain D, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
Length = 517
Score = 170 bits (431), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 134/486 (27%), Positives = 227/486 (46%), Gaps = 27/486 (5%)
Query: 205 FIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFP--AWKNTPVAT 262
FIGG+FVD GS T + INP V QV L + AV AAK AF W
Sbjct: 40 FIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARD 99
Query: 263 RQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQR-DVLFGLEVVEQACAV------AT 315
R R++++L +++ + ++LA ++ G A + V ++ AT
Sbjct: 100 RGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGAT 159
Query: 316 LQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEK 375
+ I + PN L +EP+GVC + P+N+P M W + + GNT ++KP++
Sbjct: 160 IPINQARPNRNLTLTK---KEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQV 216
Query: 376 NPGTSMILAALAMEAGLPDGVLNIVHGTNDVINH-ICDDEDIKAISFVASSTASVQ-MYA 433
P T++ A L ++AG+P GV+NI+ G+ ++ + D D++ I F S+ M +
Sbjct: 217 TPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKS 276
Query: 434 RAAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV- 492
A + K+V GGK+ II D ++ + +S+ F GE A + +FV S+
Sbjct: 277 CALSNVKKVSLALGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENAIA-AGRLFVEESIH 335
Query: 493 -QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIV 551
Q+ ++VE + +K+ + + GP ++ Q V GA+L+ G +
Sbjct: 336 NQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVP 395
Query: 552 VPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLL--NMQADSLEEAIKMVNRNRFVNGA 609
PG+ F PT+ DV +M KEE FGP+++ ++ + N F +
Sbjct: 396 RPGF----FFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLAS 451
Query: 610 SIFTSSGLAARKFQNEIEARLVGIN----VPVPSSFSSINESGEFNFCGKSGVQFYTQIK 665
+FT A ++++A V IN V + F +SG G++ + Y +IK
Sbjct: 452 GVFTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIK 511
Query: 666 TVAQQW 671
TV ++
Sbjct: 512 TVTFEY 517
>pdb|1AG8|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|B Chain B, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|C Chain C, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|D Chain D, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1A4Z|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|B Chain B, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|C Chain C, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|D Chain D, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
Length = 499
Score = 170 bits (431), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 141/489 (28%), Positives = 223/489 (45%), Gaps = 28/489 (5%)
Query: 195 PNIDNNRVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPA 254
P + N++ FI ++ D T +NP+T +V V + AV AA+ AF
Sbjct: 14 PEVLYNQI--FINNEWHDAVSKKTFPTVNPSTGDVICHVAEGDKADVDRAVKAARAAFQL 71
Query: 255 ---WKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGT-TLKAAQRDVLFGLEVVEQA 310
W+ + R R++ +L +LI RD LA T++ G + + D+ L+ +
Sbjct: 72 GSPWRRMDASERGRLLNRLADLIERDRTYLAALETLDNGKPYIISYLVDLDMVLKCLRYY 131
Query: 311 CAVATLQIGEFVPNALCGLD----TYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGN 366
A G+ +P +D +Y EP+GVC I P+NFP + W A+ GN
Sbjct: 132 AGWADKYHGKTIP-----IDGDYFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGN 186
Query: 367 TFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGTNDVIN-HICDDEDIKAISFVASS 425
++K +E+ P T++ +A L EAG P GV+N++ G I ED+ ++F S+
Sbjct: 187 VVVMKVAEQTPLTALYVANLIKEAGFPPGVVNVIPGFGPTAGAAIASHEDVDKVAFTGST 246
Query: 426 -TASVQMYARAAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALST 484
+ A + KRV GGK+ IIM DA +D + A F G+ C A +
Sbjct: 247 EVGHLIQVAAGKSNLKRVTLEIGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCA-GS 305
Query: 485 AVFVGSSVQWEDELVELAKALKVNVGT--DASADVGPVVSVEVKDQISRLIQNAVDNGAS 542
FV + E +A+A VG D+ + GP V ++ I++ + G
Sbjct: 306 RTFVQEDIYAEFVERSVARAKSRVVGNPFDSRTEQGPQVDETQFKKVLGYIKSGKEEGLK 365
Query: 543 LLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNR 602
LL G GY F+ PT+ D+ M KEEIFGPV+ ++ S+EE + N
Sbjct: 366 LLCGGGAAADRGY----FIQPTVFGDLQDGMTIAKEEIFGPVMQILKFKSMEEVVGRANN 421
Query: 603 NRFVNGASIFTSSGLAARKFQNEIEARLVGIN----VPVPSSFSSINESGEFNFCGKSGV 658
+++ A++FT A ++A V +N S F SG G+ G+
Sbjct: 422 SKYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKLSGSGRELGEYGL 481
Query: 659 QFYTQIKTV 667
Q YT++KTV
Sbjct: 482 QAYTEVKTV 490
>pdb|4I9B|A Chain A, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum
Lycopersium (slamadh1) With A Thiohemiacetal
Intermediate
pdb|4I9B|B Chain B, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum
Lycopersium (slamadh1) With A Thiohemiacetal
Intermediate
Length = 517
Score = 169 bits (428), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 140/490 (28%), Positives = 228/490 (46%), Gaps = 22/490 (4%)
Query: 196 NIDNNRVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPA- 254
N+ R +IGG++ + I +INPAT+E+ +P T E+ AV+AA++A
Sbjct: 18 NVPIPRRQLYIGGEWREPVKKNRIPIINPATEEIIGDIPAATAEDVDIAVEAARKAIARD 77
Query: 255 -WKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTL--KAAQRDVLFGLEVVEQAC 311
W +T A R + + + + LA +++ G TL AA D + G
Sbjct: 78 DWGSTTGAQRAKYLRAIAAKVLEKKSVLATLESLDSGKTLYESAADMDDVAGCFEYYAGL 137
Query: 312 AVATLQIGEFVPNALCG--LDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFI 369
A A L P L +Y REPLGV I P+N+P + +W + A+ G I
Sbjct: 138 AEA-LDSRRMTPVNLNSDSYKSYVLREPLGVVGLITPWNYPLLMAIWKVAPALAAGCAAI 196
Query: 370 LKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGTN-DVINHICDDEDIKAISFVASSTAS 428
LKPSE T + L + E GLP G LNI+ G + + + ISF S
Sbjct: 197 LKPSELASITCLELGEICREIGLPSGALNILTGLGPEAGGPLASHPHVDKISFTGSGPTG 256
Query: 429 VQMYARAAARGKRVQSNRGGKNYAIIMPDA-SIDATLNALVSAGFGAAGERCTALSTAVF 487
++ AA K V GGK+ ++ D ++D + F G+ C+A S +
Sbjct: 257 SKIMTAAAQLVKPVSLELGGKSPIVVFDDIDNLDIAAEWTLFGIFANTGQVCSATSRLIV 316
Query: 488 ---VGSSVQWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLL 544
+ S+ D L++ K +K++ + +GPVVS +++ + I NA GA++L
Sbjct: 317 QENIASAFM--DRLLKWTKNIKISDPLEEDCKLGPVVSAGQYEKVLKFISNAKSEGATIL 374
Query: 545 LDGRNIVVPGY-ENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRN 603
G P + + G +V PTI+ DV ++ME +KEE+FGPVL + E+AI++ N
Sbjct: 375 CGGER---PQHLKKGYYVQPTIITDVNTSMEIWKEEVFGPVLCVKTFKTEEQAIELANDT 431
Query: 604 RFVNGASIFTSSGLAARKFQNEIEARLVGINVPVPS----SFSSINESGEFNFCGKSGVQ 659
++ GA++ + +F + ++ IN P+ + SG GK G++
Sbjct: 432 KYGLGAAVMSKDVKRCERFTKAFQTGIIWINCSQPTFNELPWGGKKRSGFGRDLGKWGLE 491
Query: 660 FYTQIKTVAQ 669
+ IK V +
Sbjct: 492 NFLNIKQVTE 501
>pdb|4I8Q|A Chain A, Structure Of The Aminoaldehyde Dehydrogenase 1 E260a
Mutant From Solanum Lycopersicum (slamadh1-e260a)
Length = 514
Score = 168 bits (426), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 140/490 (28%), Positives = 228/490 (46%), Gaps = 22/490 (4%)
Query: 196 NIDNNRVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPA- 254
N+ R +IGG++ + I +INPAT+E+ +P T E+ AV+AA++A
Sbjct: 18 NVPIPRRQLYIGGEWREPVKKNRIPIINPATEEIIGDIPAATAEDVDIAVEAARKAIARD 77
Query: 255 -WKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTL--KAAQRDVLFGLEVVEQAC 311
W +T A R + + + + LA +++ G TL AA D + G
Sbjct: 78 DWGSTTGAQRAKYLRAIAAKVLEKKSVLATLESLDSGKTLYESAADMDDVAGCFEYYAGL 137
Query: 312 AVATLQIGEFVPNALCG--LDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFI 369
A A L P L +Y REPLGV I P+N+P + +W + A+ G I
Sbjct: 138 AEA-LDSRRMTPVNLNSDSYKSYVLREPLGVVGLITPWNYPLLMAIWKVAPALAAGCAAI 196
Query: 370 LKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGTN-DVINHICDDEDIKAISFVASSTAS 428
LKPSE T + L + E GLP G LNI+ G + + + ISF S
Sbjct: 197 LKPSELASITCLELGEICREIGLPSGALNILTGLGPEAGGPLASHPHVDKISFTGSGPTG 256
Query: 429 VQMYARAAARGKRVQSNRGGKNYAIIMPDA-SIDATLNALVSAGFGAAGERCTALSTAVF 487
++ AA K V GGK+ ++ D ++D + F G+ C+A S +
Sbjct: 257 SKIMTAAAQLVKPVSLALGGKSPIVVFDDIDNLDIAAEWTLFGIFANTGQVCSATSRLIV 316
Query: 488 ---VGSSVQWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLL 544
+ S+ D L++ K +K++ + +GPVVS +++ + I NA GA++L
Sbjct: 317 QENIASAFM--DRLLKWTKNIKISDPLEEDCKLGPVVSAGQYEKVLKFISNAKSEGATIL 374
Query: 545 LDGRNIVVPGY-ENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRN 603
G P + + G +V PTI+ DV ++ME +KEE+FGPVL + E+AI++ N
Sbjct: 375 CGGER---PQHLKKGYYVQPTIITDVNTSMEIWKEEVFGPVLCVKTFKTEEQAIELANDT 431
Query: 604 RFVNGASIFTSSGLAARKFQNEIEARLVGINVPVPS----SFSSINESGEFNFCGKSGVQ 659
++ GA++ + +F + ++ IN P+ + SG GK G++
Sbjct: 432 KYGLGAAVMSKDVKRCERFTKAFQTGIIWINCSQPTFNELPWGGKKRSGFGRDLGKWGLE 491
Query: 660 FYTQIKTVAQ 669
+ IK V +
Sbjct: 492 NFLNIKQVTE 501
>pdb|3IWJ|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From
Pisum Sativum (Psamadh2)
pdb|3IWJ|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From
Pisum Sativum (Psamadh2)
Length = 503
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 139/487 (28%), Positives = 226/487 (46%), Gaps = 20/487 (4%)
Query: 205 FIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAF-----PAWKNTP 259
FI G + + I VINPATQ + +P T E+ AV AAK A W
Sbjct: 11 FINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNKGADWATAS 70
Query: 260 VATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVA-TLQI 318
A R R + + + +LA +++ G L A D+ E +A L
Sbjct: 71 GAVRARYLRAIAAKVTEKKPELAKLESIDCGKPLDEAAWDIDDVAGCFEYYADLAEKLDA 130
Query: 319 GEFVPNALCGLDTY---CFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEK 375
+ P +L +DT+ REP+GV I P+N+P + W + A+ G ILKPSE
Sbjct: 131 RQKAPVSL-PMDTFKSHVLREPIGVVGLITPWNYPMLMATWKVAPALAAGCAAILKPSEL 189
Query: 376 NPGTSMILAALAMEAGLPDGVLNIVHGTN-DVINHICDDEDIKAISFVASSTASVQMYAR 434
T + L + E GLP GVLNI+ G + + D+ ++F SS ++
Sbjct: 190 ASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATGSKIMTA 249
Query: 435 AAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGS-SVQ 493
AA K V GGK+ ++ D +D + F G+ C+A S + S + +
Sbjct: 250 AAQLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESIATE 309
Query: 494 WEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVP 553
+ + +V+ K +K++ + +GPVVS ++I + + NA GA++L G P
Sbjct: 310 FLNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSR---P 366
Query: 554 GY-ENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIF 612
+ + G F+ PTI+ DVT+NM+ ++EE+FGPVL + EEAI + N + GA++
Sbjct: 367 EHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKTFSTEEEAIDLANDTVYGLGAAVI 426
Query: 613 TSSGLAARKFQNEIEARLVGINVPVP----SSFSSINESGEFNFCGKSGVQFYTQIKTVA 668
++ + +A +V +N P + + + SG G+ G+ Y +K V
Sbjct: 427 SNDLERCERVTKAFKAGIVWVNCSQPCFTQAPWGGVKRSGFGRELGEWGLDNYLSVKQVT 486
Query: 669 QQWNDLP 675
Q ++ P
Sbjct: 487 QYISEEP 493
>pdb|1EUH|A Chain A, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|B Chain B, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|C Chain C, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|D Chain D, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|2EUH|A Chain A, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|B Chain B, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|C Chain C, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|D Chain D, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|1QI6|A Chain A, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|B Chain B, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|C Chain C, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|D Chain D, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
Length = 475
Score = 166 bits (420), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 127/426 (29%), Positives = 211/426 (49%), Gaps = 23/426 (5%)
Query: 219 IDVINPAT-QEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRD 277
I + PA+ E+GS VP + EE +AK+A PAW+ R + K+ +++ RD
Sbjct: 20 IKIYEPASGAELGS-VPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADILMRD 78
Query: 278 IDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVPNALCGLDT-----Y 332
+K+ ++ E K+A +V+ E++ A GE + +
Sbjct: 79 KEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAV 138
Query: 333 CFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGL 392
REP+G+ I PFN+P + A+ GN KP + + ++LA EAGL
Sbjct: 139 VRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGL 198
Query: 393 PDGVLNIVHG-TNDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNY 451
P GV N + G +++ ++I + + + I+F S+ ++ A R + GGK+
Sbjct: 199 PAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAGMR--PIMLELGGKDS 256
Query: 452 AIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWEDELVE--LAKALKVNV 509
AI++ DA ++ T +++ FG +G+RCTA+ V V SV DELVE K L + +
Sbjct: 257 AIVLEDADLELTAKNIIAGAFGYSGQRCTAVKR-VLVMESVA--DELVEKIREKVLALTI 313
Query: 510 GT-DASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRD 568
G + AD+ P++ + D + LI +A D GA+ L + + GN + P +
Sbjct: 314 GNPEDDADITPLIDTKSADYVEGLINDANDKGATALTEIKR-------EGNLICPILFDK 366
Query: 569 VTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEA 628
VT++M EE FGPVL ++ S+EEAI++ N++ + ASIFT+ A ++E
Sbjct: 367 VTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEV 426
Query: 629 RLVGIN 634
V IN
Sbjct: 427 GTVHIN 432
>pdb|3TY7|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase Family Protein
From Staphylococcus Aureus
pdb|3TY7|B Chain B, Crystal Structure Of Aldehyde Dehydrogenase Family Protein
From Staphylococcus Aureus
Length = 478
Score = 166 bits (419), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 136/481 (28%), Positives = 219/481 (45%), Gaps = 16/481 (3%)
Query: 196 NIDNNRVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAW 255
N + +I G++V+ + TI+VINPAT+EV +V + AV+AA + +
Sbjct: 2 NAXRDYTKQYINGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYLEF 61
Query: 256 KNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVAT 315
++T V RQ ++ K+ + D + IT E G L ++R V + + A
Sbjct: 62 RHTSVKERQALLDKIVKEYENRKDDIVQAITDELGAPLSLSER-VHYQXGLNHFVAARDA 120
Query: 316 LQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEK 375
L EF D +E +GV I P+NFP + A G+ +LKPSE+
Sbjct: 121 LDNYEFEERRG---DDLVVKEAIGVSGLITPWNFPTNQTSLKLAAAFAAGSPVVLKPSEE 177
Query: 376 NPGTSMILAALAMEAGLPDGVLNIVHGTN-DVINHICDDEDIKAISFVASSTASVQMYAR 434
P ++ILA + + G+P GV N+V+G V N + + ++ SF S ++ +
Sbjct: 178 TPFAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRXXSFTGSGPTGSKIXEK 237
Query: 435 AAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQ- 493
AA K+V GGK+ I++ D I A G+ CTA T V V + ++
Sbjct: 238 AAKDFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTA-GTRVLVPNKIKD 296
Query: 494 -WEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVV 552
+ EL E ++V + VGP++S + DQ+ I ++ GA L G
Sbjct: 297 AFLAELKEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPG-KP 355
Query: 553 PGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIF 612
G E G F PTI +V + +EEIFGPV + + L+EAI++ N ++ +
Sbjct: 356 EGLEKGYFARPTIFINVDNQXTIAQEEIFGPVXSVITYNDLDEAIQIANDTKYGLAGYVI 415
Query: 613 TSSGLAARKFQNEIEARLVGINVP-----VPSSFSSINESGEFNFCGKSGVQFYTQIKTV 667
K IEA V IN +P F +SG G G++ + ++K++
Sbjct: 416 GKDKETLHKVARSIEAGTVEINEAGRKPDLP--FGGYKQSGLGREWGDYGIEEFLEVKSI 473
Query: 668 A 668
A
Sbjct: 474 A 474
>pdb|2ID2|A Chain A, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|B Chain B, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|C Chain C, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|D Chain D, Gapn T244s Mutant X-Ray Structure At 2.5 A
Length = 475
Score = 165 bits (418), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 127/426 (29%), Positives = 211/426 (49%), Gaps = 23/426 (5%)
Query: 219 IDVINPAT-QEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRD 277
I + PA+ E+GS VP + EE +AK+A PAW+ R + K+ +++ RD
Sbjct: 20 IKIYEPASGAELGS-VPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADILMRD 78
Query: 278 IDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVPNALCGLDT-----Y 332
+K+ ++ E K+A +V+ E++ A GE + +
Sbjct: 79 KEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAV 138
Query: 333 CFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGL 392
REP+G+ I PFN+P + A+ GN KP + + ++LA EAGL
Sbjct: 139 VRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGL 198
Query: 393 PDGVLNIVHG-TNDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNY 451
P GV N + G +++ ++I + + + I+F S+ ++ A R + GGK+
Sbjct: 199 PAGVFNTITGRGSEIGDYIVEHQAVNFINFSGSTGIGERIGKMAGMR--PIMLELGGKDS 256
Query: 452 AIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWEDELVE--LAKALKVNV 509
AI++ DA ++ T +++ FG +G+RCTA+ V V SV DELVE K L + +
Sbjct: 257 AIVLEDADLELTAKNIIAGAFGYSGQRCTAVKR-VLVMESVA--DELVEKIREKVLALTI 313
Query: 510 GT-DASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRD 568
G + AD+ P++ + D + LI +A D GA+ L + + GN + P +
Sbjct: 314 GNPEDDADITPLIDTKSADYVEGLINDANDKGATALTEIKR-------EGNLICPILFDK 366
Query: 569 VTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEA 628
VT++M EE FGPVL ++ S+EEAI++ N++ + ASIFT+ A ++E
Sbjct: 367 VTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEV 426
Query: 629 RLVGIN 634
V IN
Sbjct: 427 GTVHIN 432
>pdb|2ESD|A Chain A, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|B Chain B, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|C Chain C, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|D Chain D, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2QE0|A Chain A, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|B Chain B, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|C Chain C, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|D Chain D, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement
Length = 475
Score = 165 bits (418), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 127/426 (29%), Positives = 211/426 (49%), Gaps = 23/426 (5%)
Query: 219 IDVINPAT-QEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRD 277
I + PA+ E+GS VP + EE +AK+A PAW+ R + K+ +++ RD
Sbjct: 20 IKIYEPASGAELGS-VPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADILMRD 78
Query: 278 IDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVPNALCGLDT-----Y 332
+K+ ++ E K+A +V+ E++ A GE + +
Sbjct: 79 KEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAV 138
Query: 333 CFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGL 392
REP+G+ I PFN+P + A+ GN KP + + ++LA EAGL
Sbjct: 139 VRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGL 198
Query: 393 PDGVLNIVHG-TNDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNY 451
P GV N + G +++ ++I + + + I+F S+ ++ A R + GGK+
Sbjct: 199 PAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAGMR--PIMLALGGKDS 256
Query: 452 AIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWEDELVE--LAKALKVNV 509
AI++ DA ++ T +++ FG +G+RCTA+ V V SV DELVE K L + +
Sbjct: 257 AIVLEDADLELTAKNIIAGAFGYSGQRCTAVKR-VLVMESVA--DELVEKIREKVLALTI 313
Query: 510 GT-DASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRD 568
G + AD+ P++ + D + LI +A D GA+ L + + GN + P +
Sbjct: 314 GNPEDDADITPLIDTKSADYVEGLINDANDKGATALTEIKR-------EGNLICPILFDK 366
Query: 569 VTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEA 628
VT++M EE FGPVL ++ S+EEAI++ N++ + ASIFT+ A ++E
Sbjct: 367 VTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEV 426
Query: 629 RLVGIN 634
V IN
Sbjct: 427 GTVHIN 432
>pdb|4I8P|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From
Zea Mays (zmamadh1a)
pdb|4I8P|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From
Zea Mays (zmamadh1a)
Length = 520
Score = 164 bits (414), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 107/348 (30%), Positives = 175/348 (50%), Gaps = 10/348 (2%)
Query: 335 REPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPD 394
REP+GV I P+N+P + W + A+ G T +LKPSE T + LA + E GLP
Sbjct: 166 REPIGVVGLITPWNYPLLMATWKIAPALAAGCTAVLKPSELASVTCLELADICKEVGLPS 225
Query: 395 GVLNIVHGTN-DVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAI 453
GVLNIV G D + D+ ++F S ++ A AA K V GGK+ +
Sbjct: 226 GVLNIVTGLGPDAGAPLSAHPDVDKVAFTGSFETGKKIMASAAPMVKPVTLELGGKSPIV 285
Query: 454 IMPDASIDATLNALVSAGFGAAGERCTALS-TAVFVGSSVQWEDELVELAKALKVNVGTD 512
+ D ID + + F G+ C+A S + + ++ + +V AK +KV+ +
Sbjct: 286 VFDDVDIDKAVEWTLFGCFWTNGQICSATSRLLIHTKIAKKFNERMVAWAKNIKVSDPLE 345
Query: 513 ASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGY-ENGNFVGPTILRDVTS 571
+GPVVS ++I + I NA GA++L G V P + E G F+ PTI+ D+T+
Sbjct: 346 EGCRLGPVVSEGQYEKIKKFISNAKSQGATILTGG---VRPAHLEKGFFIEPTIITDITT 402
Query: 572 NMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLV 631
+ME ++EE+FGPVL + + +EAI++ N ++ ++ + ++ EI+A +
Sbjct: 403 SMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGCI 462
Query: 632 GINVPVP----SSFSSINESGEFNFCGKSGVQFYTQIKTVAQQWNDLP 675
+N P + + SG G+ G+ Y +K V + +D P
Sbjct: 463 WVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYISDEP 510
>pdb|1QI1|A Chain A, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|B Chain B, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|C Chain C, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|D Chain D, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
Length = 475
Score = 162 bits (409), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 126/426 (29%), Positives = 210/426 (49%), Gaps = 23/426 (5%)
Query: 219 IDVINPAT-QEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRD 277
I + PA+ E+GS VP + EE +AK+A PAW+ R + K+ +++ RD
Sbjct: 20 IKIYEPASGAELGS-VPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADILMRD 78
Query: 278 IDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVPNALCGLDT-----Y 332
+K+ ++ E K+A +V+ E++ A GE + +
Sbjct: 79 KEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAV 138
Query: 333 CFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGL 392
REP+G+ I PFN+P + A+ GN KP + + ++LA EAGL
Sbjct: 139 VRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGL 198
Query: 393 PDGVLNIVHG-TNDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNY 451
P GV N + G +++ ++I + + + I+F S+ ++ A R + GGK+
Sbjct: 199 PAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAGMR--PIMLELGGKDS 256
Query: 452 AIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWEDELVE--LAKALKVNV 509
AI++ DA ++ T +++ FG +G+R TA+ V V SV DELVE K L + +
Sbjct: 257 AIVLEDADLELTAKNIIAGAFGYSGQRSTAVKR-VLVMESVA--DELVEKIREKVLALTI 313
Query: 510 GT-DASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRD 568
G + AD+ P++ + D + LI +A D GA+ L + + GN + P +
Sbjct: 314 GNPEDDADITPLIDTKSADYVEGLINDANDKGATALTEIKR-------EGNLICPILFDK 366
Query: 569 VTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEA 628
VT++M EE FGPVL ++ S+EEAI++ N++ + ASIFT+ A ++E
Sbjct: 367 VTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEV 426
Query: 629 RLVGIN 634
V IN
Sbjct: 427 GTVHIN 432
>pdb|3U4J|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|B Chain B, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|C Chain C, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|D Chain D, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
Length = 528
Score = 157 bits (397), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 139/478 (29%), Positives = 224/478 (46%), Gaps = 12/478 (2%)
Query: 199 NNRVSNFIGGKFVDLRGSATIDVINPA-TQEVGSQVPLTTYEEFKDAVDAAKRAFPA--W 255
+R + GK VD +TID ++P EV P + ++ + AV AA++AF A W
Sbjct: 20 KSRYQXLVDGKSVDAASGSTIDRVSPGHAGEVVGTWPEASADDVRKAVAAARKAFDAGPW 79
Query: 256 KNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVAT 315
A R R+ FK+ +LI ++LA+ ++E G + A+ ++ F ++ A A
Sbjct: 80 PRXSGAERSRLXFKVADLILARQEELALIESLEVGKPIAQARGEIGFCADLWSYAAGQAR 139
Query: 316 LQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEK 375
G+ N REP+GV I P+NFP + A+ G T +LKPSE
Sbjct: 140 ALEGQTHNNIGDDRLGLVLREPVGVVGIITPWNFPFIIASERVPWAIGSGCTVVLKPSEF 199
Query: 376 NPGTSMILAALAMEAGLPDGVLNIVHGTNDVINHI-CDDEDIKAISFVASSTASVQMYAR 434
GTS+ LA LA EAG+PDGV N+V G D + +D ++ ++F S ++
Sbjct: 200 TSGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDXVAFTGSVRVGTKLGEI 259
Query: 435 AAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALS-TAVFVGSSVQ 493
AA KRV GGK I+ DA +DA + + + AG+ C + S V G
Sbjct: 260 AARTVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDA 319
Query: 494 WEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVP 553
+ L+++++ + + +G +S +++ + + +GA LLL G I
Sbjct: 320 LXERLLDISRKVAFGDPLNERTKIGAXISEAHAEKVHSYVTAGITSGAELLLGGERI--- 376
Query: 554 GYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFT 613
G E G + PT+ VT + +EEIFGPVL + + +EA+ + N F AS+++
Sbjct: 377 GREAGLYYAPTVFAGVTPDXSIAREEIFGPVLSTLTFKTADEAVALANATEFGLSASVWS 436
Query: 614 SSGLAARKFQNEIEARLVGINVPVPSS----FSSINESGEFNFCGKSGVQFYTQIKTV 667
++ A + I A IN + + +SG G+ G Y+Q K V
Sbjct: 437 TNLETALQTIRRIRAGRCWINSVIDGTPELPIGGYKKSGLGRELGRYGFDEYSQFKGV 494
>pdb|3PRL|A Chain A, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|B Chain B, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|C Chain C, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|D Chain D, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3RHH|A Chain A, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|B Chain B, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|C Chain C, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|D Chain D, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
Length = 505
Score = 156 bits (394), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 131/437 (29%), Positives = 210/437 (48%), Gaps = 23/437 (5%)
Query: 208 GKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIM 267
G++V+ R I + PA+ +P + EE DA+ AK A WK P+ R ++
Sbjct: 18 GEWVESRTGERISISAPASGVALGSIPALSQEEVNDAIQGAKDAQKIWKIRPIHERVDLL 77
Query: 268 FKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVA------TLQIGEF 321
+ +L+ + + I E K+A +V +++ A TL+ +F
Sbjct: 78 YAWADLLEERKEIIGELIMHEVAKPKKSAIGEVSRTADIIRHTADEALRLNGETLKGDQF 137
Query: 322 VPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSM 381
+ + REPLGV I PFN+P + A+ GNT + KP+ + + +
Sbjct: 138 KGGSSKKI-ALVEREPLGVVLAISPFNYPVNLAAAKIAPALVTGNTVVFKPATQGSLSGI 196
Query: 382 ILAALAMEAGLPDGVLNIVHGTNDVI-NHICDDEDIKAISFVASSTASVQMYARAAARGK 440
+ +AG P+G++ +V G VI +H+ + I I+F +T ++ + A+
Sbjct: 197 KMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERISEK--AKMI 254
Query: 441 RVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWEDELVE 500
V GGK+ AI++ DA + T + +VS F +G+RCTA+ VFV SV D+LV
Sbjct: 255 PVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKR-VFVQDSVA--DQLVA 311
Query: 501 LAKAL--KVNVGT-DASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYEN 557
K L ++ VG+ + AD+ PV+ + I LI +A++NGA+LL +
Sbjct: 312 NIKELVEQLTVGSPEDDADITPVIDEKSAAFIQGLIDDALENGATLLSGNKR-------Q 364
Query: 558 GNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGL 617
GN + PT+L DVT M EE FGPVL ++ EAI + N++ + ASIFT
Sbjct: 365 GNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDANEAISLSNQSDYGLQASIFTKDTD 424
Query: 618 AARKFQNEIEARLVGIN 634
A +E V IN
Sbjct: 425 RAINIGKHLEVGTVHIN 441
>pdb|3RH9|A Chain A, The Crystal Structure Of Oxidoreductase From Marinobacter
Aquaeolei
pdb|3RH9|B Chain B, The Crystal Structure Of Oxidoreductase From Marinobacter
Aquaeolei
Length = 506
Score = 155 bits (391), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 128/481 (26%), Positives = 226/481 (46%), Gaps = 13/481 (2%)
Query: 194 SPNIDNNRVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFP 253
SP ++N ++ +IGG++ D G AT DV NPAT V ++VP E+ AV+A + A
Sbjct: 6 SPLLEN--LTGYIGGRWKDSAGGATFDVYNPATGSVIAKVPSXPEEDVVAAVEAGQSALR 63
Query: 254 AWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAV 313
P+ TR++ + +++ ++ + +++ + E G K AQ +V + +
Sbjct: 64 LTNPWPIETRRKWLEDIRDGLKENREEIGRILCXEHGKPWKEAQGEVDYAAGFFDYCAKH 123
Query: 314 ATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPS 373
+ +P P+GV I P+NFP S A+ G ++KP+
Sbjct: 124 ISALDSHTIPEKPKDCTWTVHYRPVGVTGLIVPWNFPIGXIAKKLSAALAAGCPSVIKPA 183
Query: 374 EKNPGTSMILAALAMEAGLPDGVLNIVHGTNDVINHI-CDDEDIKAISFVASSTASVQMY 432
+ P T + ++ + LPDG +N+V G VI + C+ +D+ +SF S+ ++
Sbjct: 184 SETPLTXIAFFSVXDKLDLPDGXVNLVXGKASVIGKVLCEHKDVPXLSFTGSTEVGRKLI 243
Query: 433 ARAAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV 492
A + K++ GG I+ DA ++A + L++ F G+ C + +FV V
Sbjct: 244 VDTAEQVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVC-ANRIFVHEKV 302
Query: 493 --QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNI 550
+ +L E V G + D+GP+++ + D++ R +Q+A+D GASL+ G+
Sbjct: 303 ADAFGQKLAERVNKXTVGDGXNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVA-GKQP 361
Query: 551 VVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGAS 610
G +G F PT+++ V CY+EE FGP++ + EE I N F +
Sbjct: 362 AELG--DGLFFPPTVVQGVDREXCCYQEETFGPLVPXALFRTEEEVIDAGNDTEFGLASY 419
Query: 611 IFTSSGLAARKFQNEIEARLVGINV---PVPSS-FSSINESGEFNFCGKSGVQFYTQIKT 666
+FT+ A++ + VG N P P + F SG G G+ + + +T
Sbjct: 420 VFTADAERAQRVAAGLRFGHVGWNTGTGPTPEAPFGGXKASGIGREGGLEGLFEFVEAQT 479
Query: 667 V 667
V
Sbjct: 480 V 480
>pdb|4DAL|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|C Chain C, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|D Chain D, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|E Chain E, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|F Chain F, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|G Chain G, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|H Chain H, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4F3X|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|C Chain C, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|D Chain D, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
Length = 498
Score = 155 bits (391), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 112/419 (26%), Positives = 204/419 (48%), Gaps = 22/419 (5%)
Query: 205 FIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQ 264
IG +F + A ++NP T + ++ + AVDAA+RAF W T A R
Sbjct: 29 LIGSRF-EAGTEAEEHILNPRTGAGIIDLAEASHAQIDAAVDAAERAFVGWSQTTPAERS 87
Query: 265 RIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQ--ACAVATLQI---G 319
+ K+ + I ++ D+ A + G + A + D L + + A AV L G
Sbjct: 88 NALLKIADAIEKEADEFAALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRNLHAPAAG 147
Query: 320 EFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGT 379
E++P G + R+P+G+ I P+N+P W + A+ GNT + KPSE+ P T
Sbjct: 148 EYLP----GHTSXIRRDPIGIVGSIAPWNYPLXXXAWKLAPAIGGGNTVVFKPSEQTPLT 203
Query: 380 SMILAALAMEAGLPDGVLNIVHGTNDVI-NHICDDEDIKAISFVASSTASVQMYARAAAR 438
++ LA L + LP+GV+N++ G + + N + + + +S ++ A AA
Sbjct: 204 ALKLARLIADI-LPEGVVNVITGRGETVGNALINHPKVGXVSITGDIATGKKVLAAAAKT 262
Query: 439 GKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWEDEL 498
KR GGK I+ DA ++A +N + + G+ AG+ CTA + ++ + + +E +
Sbjct: 263 VKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTA-ACRIYAEAGI-YEKLV 320
Query: 499 VELAKA---LKVNVGTDASADVGPVVSVEVKDQISRLIQNAVD-NGASLLLDGRNIVVPG 554
+L A ++ N+ D ++GP++S +D+++ ++ A D + GR G
Sbjct: 321 ADLTSAVSTIRYNLDDDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRT----G 376
Query: 555 YENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFT 613
+ G F PT++ T E + E+FGPV+ + ++A+ N + + +S++T
Sbjct: 377 SDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDDAVAWANDSDYGLASSVWT 435
>pdb|2W8N|A Chain A, The Crytal Structure Of The Oxidized Form Of Human Ssadh
pdb|2W8O|A Chain A, The Crystal Structure Of The Reduced Form Of Human Ssadh
Length = 487
Score = 152 bits (383), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 134/481 (27%), Positives = 223/481 (46%), Gaps = 24/481 (4%)
Query: 201 RVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPV 260
R +F+GG++ L +AT V +PA+ V E + AV AA AF W+
Sbjct: 12 RTDSFVGGRW--LPAAATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCRWREVSA 69
Query: 261 ATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGE 320
R ++ K L+ ++ D LA IT E G LK A ++L+ +E A G+
Sbjct: 70 KERSSLLRKWYNLMIQNKDDLARIITAESGKPLKEAHGEILYSAFFLEWFSEEARRVYGD 129
Query: 321 FVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTS 380
+ ++P+GV A I P+NFP A+ G T ++KP+E P ++
Sbjct: 130 IIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSA 189
Query: 381 MILAALAMEAGLPDGVLNIV----HGTNDVINHICDDEDIKAISFVASSTASVQMYARAA 436
+ LA LA +AG+P GV N++ +V IC D + ISF S+T + AA
Sbjct: 190 LALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAA 249
Query: 437 ARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWED 496
KRV GG I+ A++D + +++ F G+ C S V + D
Sbjct: 250 NSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVC-SNQFLVQRGIH--D 306
Query: 497 ELVE-----LAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIV 551
V+ + K L+V G + GP+++ + +++ + + +AV GA+++ G+
Sbjct: 307 AFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKR-- 364
Query: 552 VPGYENG-NFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGAS 610
++ G NF PT+L +VT +M C EE FGP+ ++ D+ EEAI + N
Sbjct: 365 ---HQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGY 421
Query: 611 IFTSSGLAARKFQNEIEARLVGINVPVPSS----FSSINESGEFNFCGKSGVQFYTQIKT 666
++ + ++E +VG+N + SS F + +SG K G+ Y ++K
Sbjct: 422 FYSQDPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLELKY 481
Query: 667 V 667
V
Sbjct: 482 V 482
>pdb|3B4W|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Aldehyde
Dehydrogenase Complexed With Nad+
Length = 495
Score = 150 bits (380), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 137/472 (29%), Positives = 212/472 (44%), Gaps = 14/472 (2%)
Query: 205 FIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAF--PAWKNTPVAT 262
FIGGK+ S I+V PAT E +VP+ + AV AA+ AF W +TP
Sbjct: 12 FIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPSTPPHE 71
Query: 263 RQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFV 322
R ++ +++ D + E G + G A A ++
Sbjct: 72 RAAVIAAAVKMLAERKDLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWTE 131
Query: 323 PNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMI 382
+ REP+GV I +N P + + A+ G T +LKP+ + P T+
Sbjct: 132 TRTGSYGQSIVSREPVGVVGAIVAWNVPLFLAVNKIAPALLAGCTIVLKPAAETPLTANA 191
Query: 383 LAALAMEAGLPDGVLNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRV 442
LA + E GLP+GVL++V G + + + DI +F SS ++ RAA K
Sbjct: 192 LAEVFAEVGLPEGVLSVVPGGIETGQALTSNPDIDMFTFTGSSAVGREVGRRAAEMLKPC 251
Query: 443 QSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWEDELV--- 499
GGK+ AII+ D + A + +V +G AG+ C T + S DE+V
Sbjct: 252 TLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVN-QTRILAPRSRY--DEIVAAV 308
Query: 500 -ELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENG 558
AL V +D +A +GP++S + + ++ I ++ GA L+ G G +NG
Sbjct: 309 TNFVTALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGR--PEGLDNG 366
Query: 559 NFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLA 618
F+ PT+ DV + M +EEIFGPVL + D+ E+AI + N + + S++T+
Sbjct: 367 FFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEEDAIAIANDSVYGLAGSVWTTDVPK 426
Query: 619 ARKFQNEIEARLVGINVPV---PSSFSSINESGEFNFCGKSGVQFYTQIKTV 667
K +I GIN S F SG G GV+ +TQ K+V
Sbjct: 427 GIKISQQIRTGTYGINWYAFDPGSPFGGYKNSGIGRENGPEGVEHFTQQKSV 478
>pdb|2W8P|A Chain A, The Crystal Structure Of Human C340a Ssadh
pdb|2W8Q|A Chain A, The Crystal Structure Of Human Ssadh In Complex With Ssa.
pdb|2W8R|A Chain A, The Crystal Structure Of Human Ssadh In Complex With Nad+
Length = 487
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 133/480 (27%), Positives = 226/480 (47%), Gaps = 22/480 (4%)
Query: 201 RVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPV 260
R +F+GG++ L +AT V +PA+ V E + AV AA AF W+
Sbjct: 12 RTDSFVGGRW--LPAAATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCRWREVSA 69
Query: 261 ATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGE 320
R ++ K L+ ++ D LA IT E G LK A ++L+ +E A G+
Sbjct: 70 KERSSLLRKWYNLMIQNKDDLARIITAESGKPLKEAHGEILYSAFFLEWFSEEARRVYGD 129
Query: 321 FVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTS 380
+ ++P+GV A I P+NFP A+ G T ++KP+E P ++
Sbjct: 130 IIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSA 189
Query: 381 MILAALAMEAGLPDGVLNIV----HGTNDVINHICDDEDIKAISFVASSTASVQMYARAA 436
+ LA LA +AG+P GV N++ +V IC D + ISF S+T + AA
Sbjct: 190 LALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAA 249
Query: 437 ARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWED 496
KRV GG I+ A++D + +++ F G+ TA+ + F+ +
Sbjct: 250 NSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQ--TAVCSNQFLVQRGIHDA 307
Query: 497 ELVELAKALKVNV----GTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVV 552
+ A+A+K N+ G + GP+++ + +++ + + +AV GA+++ G+
Sbjct: 308 FVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKR--- 364
Query: 553 PGYENG-NFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASI 611
++ G NF PT+L +VT +M C EE FGP+ ++ D+ EEAI + N
Sbjct: 365 --HQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYF 422
Query: 612 FTSSGLAARKFQNEIEARLVGINVPVPSS----FSSINESGEFNFCGKSGVQFYTQIKTV 667
++ + ++E +VG+N + SS F + +SG K G+ Y ++K V
Sbjct: 423 YSQDPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLELKYV 482
>pdb|4DNG|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Bacillus Subtilis Subsp. Subtilis Str. 168
pdb|4DNG|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Bacillus Subtilis Subsp. Subtilis Str. 168
Length = 485
Score = 146 bits (368), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 123/465 (26%), Positives = 218/465 (46%), Gaps = 27/465 (5%)
Query: 204 NFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATR 263
+FI GK+ T D++NP Q V + L T ++ +DA D A++A W + R
Sbjct: 9 SFINGKWTGGESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQKEWAKSTTEDR 68
Query: 264 QRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEF-- 321
+ ++ K + + + D + M I E G T+ + ++ + ++++A T ++G
Sbjct: 69 KAVLQKARGYLHENRDDIIMMIARETGGTIIKSTIELEQTIAILDEAMTY-TGELGGVKE 127
Query: 322 VPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSM 381
VP+ + G +R PLGV + I PFNFP + + A+ GN+ + KP + +
Sbjct: 128 VPSDIEGKTNKIYRLPLGVISSISPFNFPMNLSMRSIAPAIALGNSVVHKPDIQTAISGG 187
Query: 382 ILAALAME-AGLPDGVLNI-VHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAARG 439
+ A A E AGLP GVLN+ + ++ + + + + ISF S+ + A
Sbjct: 188 TIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGEIAGRAF 247
Query: 440 KRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWEDELV 499
KR+ GG N ++ DA +D ++A + F G+ C ++ + V V DE V
Sbjct: 248 KRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINR-IIVHQDVY--DEFV 304
Query: 500 E----LAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGY 555
E K L TD VGP+++ ++ +I+ A +G L ++G+ +
Sbjct: 305 EKFTARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGKRV----- 359
Query: 556 ENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSS 615
GN + P + +N + + E+F P+ ++A S +EAI M N + +++FTS
Sbjct: 360 --GNVLTPYVFVGADNNSKIAQTELFAPIATIIKAGSDQEAIDMANDTEYGLSSAVFTSD 417
Query: 616 GLAARKFQNEIEARLVGINVPVPSSFSSINESGEFNFCGK--SGV 658
KF +I++ + +N S+N+S F G SGV
Sbjct: 418 LEKGEKFALQIDSGMTHVND------QSVNDSPNIAFGGNKASGV 456
>pdb|3EFV|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|B Chain B, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|C Chain C, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|D Chain D, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3ETF|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|B Chain B, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|C Chain C, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|D Chain D, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
Length = 462
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 122/454 (26%), Positives = 205/454 (45%), Gaps = 16/454 (3%)
Query: 222 INPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKL 281
+NPAT + + P +E + A+ A F WK T VA R + + + + +R ++
Sbjct: 12 VNPATGQTLAAXPWANAQEIEHALSLAASGFKKWKXTSVAQRAQTLRDIGQALRAHAEEX 71
Query: 282 AMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIG---EFVPNALCGLDTYCFREPL 338
A IT E G +K A+ +V + + + V N ++ +R PL
Sbjct: 72 AQCITREXGKPIKQARAEVTKSAALCDWYAEHGPAXLNPEPTLVENQQAVIE---YR-PL 127
Query: 339 GVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLN 398
GV I P+NFP L + GN+++LK + G + +A + EAG P GV
Sbjct: 128 GVILAIXPWNFPLWQVLRGAVPILLAGNSYLLKHAPNVTGCAQXIARILAEAGTPAGVYG 187
Query: 399 IVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMPDA 458
V+ N+ ++ +D I A++ S A + A+A A K+ GG + I++ DA
Sbjct: 188 WVNANNEGVSQXINDPRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFIVLNDA 247
Query: 459 SIDATLNALVSAGFGAAGERCTALSTAVF-VGSSVQWEDELVELAKALKVNVGTDASADV 517
++ + A V+ + G+ C A + G + + D V A ALK D+
Sbjct: 248 DLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKXGDPLVEENDL 307
Query: 518 GPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYK 577
GP +++D++ + +Q +V GA LLL G I GN+ T+L DVT + ++
Sbjct: 308 GPXARFDLRDELHQQVQASVAEGARLLLGGEKIA----GEGNYYAATVLADVTPDXTAFR 363
Query: 578 EEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPV 637
+E+FGPV A A+ + N + F A+IFT+ A + +E V IN
Sbjct: 364 QELFGPVAAITVAKDAAHALALANDSEFGLSATIFTADDTLAAEXAARLECGGVFINGYS 423
Query: 638 PS----SFSSINESGEFNFCGKSGVQFYTQIKTV 667
S +F + +SG G+ + ++TV
Sbjct: 424 ASDARVAFGGVKKSGFGRELSHFGLHEFCNVQTV 457
>pdb|1UZB|A Chain A, 1-pyrroline-5-carboxylate Dehydrogenase
pdb|1UZB|B Chain B, 1-pyrroline-5-carboxylate Dehydrogenase
pdb|2EIW|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Proline
pdb|2EIW|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Proline
Length = 516
Score = 143 bits (360), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 134/488 (27%), Positives = 222/488 (45%), Gaps = 33/488 (6%)
Query: 205 FIGGKFVDLRGSATIDVINP-ATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATR 263
+IGG++VD + + +NP A EV E + A++AA +AF WK+ P R
Sbjct: 41 YIGGEWVDTK--ERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFKTWKDWPQEDR 98
Query: 264 QRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIG---- 319
R++ K L+RR +L + E G A DV ++ +E A A L+
Sbjct: 99 SRLLLKAAALMRRRKRELEATLVYEVGKNWVEASADVAEAIDFIEY-YARAALRYRYPAV 157
Query: 320 EFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGT 379
E VP G D F PLG I P+NFP M V GNT I KP+E
Sbjct: 158 EVVP--YPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVV 215
Query: 380 SMILAALAMEAGLPDGVLNIVHGTNDVIN-HICDDEDIKAISFVASSTASVQMYARAAAR 438
+ + EAG P GV+N + G + + ++ + I+ I+F S +++Y AA R
Sbjct: 216 GAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIY-EAAGR 274
Query: 439 -------GKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSS 491
KR GGKN I+ A D +V + +G G++C+A S + +
Sbjct: 275 LAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGA 334
Query: 492 VQWEDELVELAKALKVNVG-TDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNI 550
+ E V L +A +++VG + + D+GPVVS E + ++ I+ + G L+L G+ +
Sbjct: 335 YEPVLERV-LKRAERLSVGPAEENPDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGGKRL 392
Query: 551 VVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGAS 610
GY F+ PT+ +V +EEIFGPVL ++ EA+++ N +
Sbjct: 393 EGEGY----FIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGG 448
Query: 611 IFTSSGLAARKFQNEIEARLVGINVPVPSSFSSINESGEFNFCG---KSG----VQFYTQ 663
+++ + E + N + + + G F G K+G ++ + +
Sbjct: 449 VYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLE 508
Query: 664 IKTVAQQW 671
+K VA+++
Sbjct: 509 MKAVAERF 516
>pdb|2BHP|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad.
pdb|2BHP|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad.
pdb|2BJK|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Citrate.
pdb|2BJK|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Citrate.
pdb|2IY6|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With
Bound Citrate
pdb|2IY6|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With
Bound Citrate
pdb|2EHQ|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadp
pdb|2EHQ|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadp
pdb|2EJ6|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
D-Proline
pdb|2EJ6|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
D-Proline
pdb|2BHQ|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Product Glutamate.
pdb|2BHQ|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Product Glutamate.
pdb|2J5N|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophirus With Bound Inhibitor Glycine And Nad.
pdb|2J5N|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophirus With Bound Inhibitor Glycine And Nad.
pdb|2EIT|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine And Nad
pdb|2EIT|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine And Nad
pdb|2EHU|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Inhibitor
L-Serine
pdb|2EHU|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Inhibitor
L-Serine
pdb|2EII|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Valine And Nad.
pdb|2EII|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Valine And Nad
Length = 516
Score = 141 bits (356), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 133/488 (27%), Positives = 222/488 (45%), Gaps = 33/488 (6%)
Query: 205 FIGGKFVDLRGSATIDVINP-ATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATR 263
+IGG++VD + + +NP A EV E + A++AA +AF WK+ P R
Sbjct: 41 YIGGEWVDTK--ERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFKTWKDWPQEDR 98
Query: 264 QRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIG---- 319
R++ K L+RR +L + E G A DV ++ +E A A L+
Sbjct: 99 SRLLLKAAALMRRRKRELEATLVYEVGKNWVEASADVAEAIDFIEY-YARAALRYRYPAV 157
Query: 320 EFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGT 379
E VP G D F PLG I P+NFP M V GNT I KP+E
Sbjct: 158 EVVP--YPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVV 215
Query: 380 SMILAALAMEAGLPDGVLNIVHGTNDVIN-HICDDEDIKAISFVASSTASVQMYARAAAR 438
+ + EAG P GV+N + G + + ++ + I+ I+F S +++Y AA R
Sbjct: 216 GAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIY-EAAGR 274
Query: 439 -------GKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSS 491
KR GGK+ I+ A D +V + +G G++C+A S + +
Sbjct: 275 LAPGQTWFKRAYVETGGKDAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGA 334
Query: 492 VQWEDELVELAKALKVNVG-TDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNI 550
+ E V L +A +++VG + + D+GPVVS E + ++ I+ + G L+L G+ +
Sbjct: 335 YEPVLERV-LKRAERLSVGPAEENPDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGGKRL 392
Query: 551 VVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGAS 610
GY F+ PT+ +V +EEIFGPVL ++ EA+++ N +
Sbjct: 393 EGEGY----FIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGG 448
Query: 611 IFTSSGLAARKFQNEIEARLVGINVPVPSSFSSINESGEFNFCG---KSG----VQFYTQ 663
+++ + E + N + + + G F G K+G ++ + +
Sbjct: 449 VYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLE 508
Query: 664 IKTVAQQW 671
+K VA+++
Sbjct: 509 MKAVAERF 516
>pdb|4F9I|A Chain A, Crystal Structure Of Proline Utilization A (Puta) From
Geobacter Sulfurreducens Pca
pdb|4F9I|B Chain B, Crystal Structure Of Proline Utilization A (Puta) From
Geobacter Sulfurreducens Pca
Length = 1026
Score = 141 bits (356), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 136/422 (32%), Positives = 203/422 (48%), Gaps = 20/422 (4%)
Query: 205 FIGGKFVDLRGSATIDVINPAT-QEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATR 263
FI GK ++R + I +NP EV Q+ E DA+ AAK AFPAW++T TR
Sbjct: 535 FINGK--EVRTNDLIPTVNPNKPSEVLGQICQAGTTEVGDAIAAAKAAFPAWRDTDPRTR 592
Query: 264 QRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGE--F 321
+ K + R+ + +L+ +E G A DV ++ +E A +++G+
Sbjct: 593 AEYLLKAAQAARKRLFELSAWQVLEIGKQWDQAYADVTEAIDFLEY-YAREMIRLGQPQR 651
Query: 322 VPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSM 381
V +A L+ Y F EP GV A I P+NFP + M S A+ GN + KPS
Sbjct: 652 VGHAPGELNHY-FYEPKGVAAVIAPWNFPLAISMGMASAAIVTGNCVVFKPSGITSIIGW 710
Query: 382 ILAALAMEAGLPDGVLNIVHGTNDVI-NHICDDEDIKAISFVASSTASVQMYARAA---- 436
L L EAGLP+GV N G V+ +++ D DI I+F S +++ RAA
Sbjct: 711 HLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERAAKVHP 770
Query: 437 --ARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-Q 493
A K++ S GGKN II DA +D + ++ + FG G++C+A S + + + +
Sbjct: 771 GQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLDAVYDK 830
Query: 494 WEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVP 553
+ + LV +AKA KV D + +G V + I + G L VP
Sbjct: 831 FIERLVSMAKATKVGPSEDPANYMGAVADDKAMKSIKEYAEIGKREGHVLY----ESPVP 886
Query: 554 GYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFT 613
E G FV TI+ + +EEIFGPVL M+A ++AI+ N +F IF+
Sbjct: 887 AGE-GYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAKDFDQAIEWANSTQFALTGGIFS 945
Query: 614 SS 615
S
Sbjct: 946 RS 947
>pdb|3QAN|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
pdb|3QAN|B Chain B, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
pdb|3QAN|C Chain C, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
Length = 538
Score = 140 bits (353), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 125/468 (26%), Positives = 213/468 (45%), Gaps = 27/468 (5%)
Query: 223 NPATQE--VGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDK 280
NPA ++ VGS V + + A+ +A AF W+N R I+ K +IRR +
Sbjct: 57 NPARKDQLVGS-VSKANQDLAEKAIQSADEAFQTWRNVNPEERANILVKAAAIIRRRKHE 115
Query: 281 LAMNITVEQGTTLKAAQRDVLFGLEVVEQ-ACAVATLQIGEFVPNALCGLDTYCFREPLG 339
+ + E G K A D ++ +E A + L G+ + + + Y F P+G
Sbjct: 116 FSAWLVHEAGKPWKEADADTAEAIDFLEYYARQMIELNRGKEILSRPGEQNRY-FYTPMG 174
Query: 340 VCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNI 399
V I P+NF + + GNT +LKP+ P + + +AGLP GV+N
Sbjct: 175 VTVTISPWNFALAIMVGTAVAPIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGVINY 234
Query: 400 VHGTN-DVINHICDDEDIKAISFVASSTASVQMYARAAA------RGKRVQSNRGGKNYA 452
V G+ +V +++ D I+F S V++Y RAA KRV GGK+
Sbjct: 235 VPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERAAVVRPGQNHLKRVIVEMGGKDTV 294
Query: 453 IIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWE--DELVELAKALKVNVG 510
++ DA +D +++ + FG +G++C+A S AV + V E ++ V LAK L V
Sbjct: 295 VVDRDADLDLAAESILVSAFGFSGQKCSAGSRAV-IHKDVYDEVLEKTVALAKNLTVGDP 353
Query: 511 TDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVT 570
T+ +GPV+ + ++I I+ G L+ G G+ F+ PTI+ D+
Sbjct: 354 TNRDNYMGPVIDEKAFEKIMSYIEIGKKEG-RLMTGGEGDSSTGF----FIQPTIIADLD 408
Query: 571 SNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARL 630
+EEIFGPV+ +A+ + A+++ N + ++ T + + + E
Sbjct: 409 PEAVIMQEEIFGPVVAFSKANDFDHALEIANNTEYGLTGAVITRNRAHIEQAKREFHVGN 468
Query: 631 VGINVPVPSSFSSINESGEFNFCG---KSG----VQFYTQIKTVAQQW 671
+ N + + G F G K+G + + Q KTV++ +
Sbjct: 469 LYFNRNCTGAIVGYHPFGGFKMSGTDSKAGGPDYLALHMQAKTVSEMY 516
>pdb|2BJA|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadh
pdb|2BJA|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadh
pdb|2J40|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophilus With Bound Inhibitor L-Proline And Nad.
pdb|2J40|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophilus With Bound Inhibitor L-Proline And Nad.
pdb|2EJD|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine
pdb|2EJD|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine
pdb|2EJL|A Chain A, Crystal Analysis Of Delta1-pyrroline-5-carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-serine
pdb|2EJL|B Chain B, Crystal Analysis Of Delta1-pyrroline-5-carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-serine
Length = 516
Score = 137 bits (344), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 132/488 (27%), Positives = 221/488 (45%), Gaps = 33/488 (6%)
Query: 205 FIGGKFVDLRGSATIDVINP-ATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATR 263
+IGG++VD + + +NP A EV E + A++AA +AF WK+ P R
Sbjct: 41 YIGGEWVDTK--ERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFKTWKDWPQEDR 98
Query: 264 QRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIG---- 319
R++ K L+RR +L + E G A DV ++ +E A A L+
Sbjct: 99 SRLLLKAAALMRRRKRELEATLVYEVGKNWVEASADVAEAIDFIEY-YARAALRYRYPAV 157
Query: 320 EFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGT 379
E VP G D F PLG I P+NFP M V GNT I KP+E
Sbjct: 158 EVVP--YPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVV 215
Query: 380 SMILAALAMEAGLPDGVLNIVHGTNDVIN-HICDDEDIKAISFVASSTASVQMYARAAAR 438
+ + EAG P GV+N + G + + ++ + I+ I+F S +++Y AA R
Sbjct: 216 GAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIY-EAAGR 274
Query: 439 -------GKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSS 491
KR GGK+ I+ A D +V + +G G++ +A S + +
Sbjct: 275 LAPGQTWFKRAYVETGGKDAIIVDETADFDLAAEGVVVSAYGFQGQKXSAASRLILTQGA 334
Query: 492 VQWEDELVELAKALKVNVG-TDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNI 550
+ E V L +A +++VG + + D+GPVVS E + ++ I+ + G L+L G+ +
Sbjct: 335 YEPVLERV-LKRAERLSVGPAEENPDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGGKRL 392
Query: 551 VVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGAS 610
GY F+ PT+ +V +EEIFGPVL ++ EA+++ N +
Sbjct: 393 EGEGY----FIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGG 448
Query: 611 IFTSSGLAARKFQNEIEARLVGINVPVPSSFSSINESGEFNFCG---KSG----VQFYTQ 663
+++ + E + N + + + G F G K+G ++ + +
Sbjct: 449 VYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLE 508
Query: 664 IKTVAQQW 671
+K VA+++
Sbjct: 509 MKAVAERF 516
>pdb|2JG7|A Chain A, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|B Chain B, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|C Chain C, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|D Chain D, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|E Chain E, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|F Chain F, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|G Chain G, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|H Chain H, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
Length = 510
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 114/430 (26%), Positives = 196/430 (45%), Gaps = 15/430 (3%)
Query: 224 PATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAM 283
PA E ++V T E+++ V + A+ W + P R I+ ++ + +R+ I L
Sbjct: 42 PANNEPIARVTQATLAEYEETVQKTREAWKMWADIPAPKRGEIVRQIGDALRKKIKVLGS 101
Query: 284 NITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAG 343
+++E G +V ++V + A ++ + G +P+ G P+G+
Sbjct: 102 LVSLEMGKIYVEGVGEVQEYVDVCDYAVGLSRMIGGPVLPSERPGHALIEQWNPVGLVGI 161
Query: 344 ICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSM----ILAALAMEAGLPDGVLNI 399
I FNFP W +IA+TCGN + K + P TS+ I+A + + LP + ++
Sbjct: 162 ITAFNFPVAVYGWNNAIALTCGNVCLWKGAPTTPLTSVAVTKIVAEVLEQNNLPGAICSM 221
Query: 400 VHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMPDAS 459
G D+ + DE + +SF S+ + R R GG N I+ DA
Sbjct: 222 TCGGADIGTAMAKDERVDLLSFTGSTHVGKMVAMMVQERFGRKLLELGGNNAIIVFEDAD 281
Query: 460 IDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWEDELVE-LAKALK-VNVG--TDASA 515
++ + + V A G AG+RCT + + + SV D +VE +AKA K V +G D S
Sbjct: 282 LNLVVPSAVFASVGTAGQRCTT-TRRLMLHESVH--DAVVERIAKAYKQVRIGDPWDPST 338
Query: 516 DVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMEC 575
GP+ + + DQ I+ A G +L+ G+ + P GN+V PTI+ + +
Sbjct: 339 LYGPLHTKQAVDQYLAAIEQAKQQGGTLVCGGKVMDRP----GNYVEPTIITGLAHDAPI 394
Query: 576 YKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINV 635
E F P+L ++ + EEA N + +SIFT ++ + +NV
Sbjct: 395 VHTETFVPILYVLKFKTEEEAFAWNNEVQQGLSSSIFTKDLGRVFRWLGPKGSDCGIVNV 454
Query: 636 PVPSSFSSIN 645
+P+S + I
Sbjct: 455 NIPTSGAEIG 464
>pdb|3RJL|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|B Chain B, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|C Chain C, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|D Chain D, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|E Chain E, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|F Chain F, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|G Chain G, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|H Chain H, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
Length = 538
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 114/409 (27%), Positives = 191/409 (46%), Gaps = 33/409 (8%)
Query: 222 INPAT-QEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDK 280
INPA +EV V T + + A+ AA +AF W+ T R ++F+ +RR +
Sbjct: 56 INPANKEEVVGTVSKATQDHAEKAIQAAAKAFETWRYTDPEERAAVLFRAVAKVRRKKHE 115
Query: 281 LAMNITVEQGTTLKAAQRDVLFGLEVVEQ-ACAVATLQIGEFVPNALCGLDTYCFREPLG 339
+ + E G A D ++ +E A + L G+ V + + Y + P G
Sbjct: 116 FSALLVKEAGKPWNEADADTAEAIDFMEYYARQMIELAKGKPVNSREGERNQYVYT-PTG 174
Query: 340 VCAGICPFNFPDMTPLWMFSIA-------VTCGNTFILKPSEKNPGTSMILAALAMEAGL 392
V I P+NF +F+I + GNT +LKP+ P + + E+GL
Sbjct: 175 VTVVIPPWNF-------LFAIMAGTTVAPIVTGNTVVLKPASAAPVIAAKFVEVLEESGL 227
Query: 393 PDGVLNIVHGTN-DVINHICDDEDIKAISFVASSTASVQMYARAA------ARGKRVQSN 445
P GV+N V G+ +V +++ D I+F S +++ RAA K+V +
Sbjct: 228 PKGVVNFVPGSGAEVGDYLVDHPKTSIITFTGSREVGTRIFERAAKVQPGQTHLKQVIAE 287
Query: 446 RGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWE--DELVELAK 503
GGK+ ++ D I+ ++ ++ FG AG++C+A S AV V V E ++E+ +
Sbjct: 288 MGGKDTVVVDEDCDIELAAQSIFTSAFGFAGQKCSAGSRAV-VHEKVYDEVLKRVIEITE 346
Query: 504 ALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGP 563
+ KV A +GPV+ ++I I+ + G L+ G+ GY F+ P
Sbjct: 347 SKKVGEPDSADVYMGPVIDQASFNKIMDYIEIGKEEG-RLVSGGKGDDSKGY----FIEP 401
Query: 564 TILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRF-VNGASI 611
TI D+ +EEIFGPV+ + S +EA+++ N + + GA I
Sbjct: 402 TIFADLDPKARLMQEEIFGPVVAFSKVSSFDEALEVANNTEYGLTGAVI 450
>pdb|3R64|A Chain A, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|B Chain B, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|C Chain C, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|D Chain D, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
Length = 508
Score = 131 bits (330), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 122/440 (27%), Positives = 212/440 (48%), Gaps = 20/440 (4%)
Query: 204 NFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATR 263
+ IGG++V+ INP V ++ + + A +AAK+A W TP A R
Sbjct: 15 HLIGGQWVEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKKAQAEWAATPAAER 74
Query: 264 QRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVP 323
I+++ EL+ +++ + E G+T A ++ + +++ + G P
Sbjct: 75 SAIIYRAAELLEEHREEIVEWLIKESGSTRSKANLEITLAGNITKESASFPGRVHGRISP 134
Query: 324 NALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMIL 383
+ G + +R GV I P+NFP + + A+ GN ++KP+ P T ++
Sbjct: 135 SNTPGKENRVYRVAKGVVGVISPWNFPLNLSIRSVAPALAVGNAVVIKPASDTPVTGGVI 194
Query: 384 AA-LAMEAGLPDGVLNIVHGT-NDVINHICDDEDIKAISFVASSTASVQMYARAAARG-- 439
A + EAG+P GV++ V G +++ +H K ISF S+ ++ A G
Sbjct: 195 PARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRVGELAINGGPM 254
Query: 440 KRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWEDELV 499
K V GG +++ DA IDA A F G+ C +++ V V ++V DE +
Sbjct: 255 KTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINR-VIVDAAVH--DEFL 311
Query: 500 E-LAKALKVNVGT-DASAD---VGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPG 554
E +A+K N+ T D SA+ VGPV++ + I+ A GA++ ++G
Sbjct: 312 EKFVEAVK-NIPTGDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPI----- 365
Query: 555 YENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTS 614
G V P + DVTS+ME +EEIFGP++ ++AD A ++ N + F A++++
Sbjct: 366 --EGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKADDEAHAAELANASDFGLSAAVWSK 423
Query: 615 SGLAARKFQNEIEARLVGIN 634
A +F +I++ +V IN
Sbjct: 424 DIDRAAQFALQIDSGMVHIN 443
>pdb|1WNB|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|B Chain B, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|C Chain C, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|D Chain D, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WND|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|B Chain B, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|C Chain C, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|D Chain D, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
Length = 495
Score = 128 bits (322), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 117/419 (27%), Positives = 192/419 (45%), Gaps = 22/419 (5%)
Query: 205 FIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQ 264
I G+ V G V NPAT +V ++ + E+ AV AA AF W T R
Sbjct: 27 LINGELVSGEGEKQ-PVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPKVRA 85
Query: 265 RIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVAT-----LQIG 319
+ KL ++I + A + G L +A D + + V + A A L G
Sbjct: 86 ECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAG 145
Query: 320 EFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGT 379
E+ L G + R+PLGV A I P+N+P M W + A+ GN +LKPSE P T
Sbjct: 146 EY----LEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLT 201
Query: 380 SMILAALAMEAGLPDGVLNIVHGTNDVINH-ICDDEDIKAISFVASSTASVQMYARAAAR 438
++ LA LA + P GV+NI+ G + + ++ +S S + + A+
Sbjct: 202 ALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTASS 260
Query: 439 GKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWEDEL 498
KR GGK I+ DA I+A + + + G+ AG+ CTA + ++ + D L
Sbjct: 261 IKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTA-ACRIYAQKGIY--DTL 317
Query: 499 VELAKA----LKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPG 554
VE A LK D S ++GP+ S+ +++ + ++ A G ++ G
Sbjct: 318 VEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGE---KR 374
Query: 555 YENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFT 613
NG + PT+L + ++E+FGPV+ D+ E+ + N +++ +S++T
Sbjct: 375 KGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWT 433
>pdb|1UXV|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
Length = 501
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 118/474 (24%), Positives = 213/474 (44%), Gaps = 34/474 (7%)
Query: 219 IDVINPATQEVGSQVPLTTYEEFKDAVDAA-KRAFPAWKNTPVATRQRIMFKLQELIRRD 277
I+V +P ++V + EE + +D KR + ++ P R ++ K ++I R+
Sbjct: 34 IEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRWSARDMPGTERLAVLRKAADIIERN 93
Query: 278 IDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVPNALC--GLDTYCF- 334
+D A + + G AA +V ++ + A G+++P L+T
Sbjct: 94 LDVFAEVLVMNAGKPKSAAVGEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLV 153
Query: 335 -REPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLP 393
REPLGV A I PFN+P + + + GN ++KPS +P + + ++AG P
Sbjct: 154 RREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFP 213
Query: 394 DGVLNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAARG--KRVQSNRGGKNY 451
+ +++ I D+ + A+SF T S ++ R G K+ GG +
Sbjct: 214 PDAIALLNLPGKEAEKIVADDRVAAVSF----TGSTEVGERVVKVGGVKQYVMELGGGDP 269
Query: 452 AIIMPDASIDATLNALVSAGFGAAGERCTALSTAV----FVGSSVQWEDELVELAKALKV 507
AI++ DA +D + + + AG+RC A+ + G V+ E+ + +L+V
Sbjct: 270 AIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVE---EVAKRLSSLRV 326
Query: 508 NVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILR 567
D + DVGP++S D++ I++AV+ G +L GR + +V PT++
Sbjct: 327 GDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRL------GPTYVQPTLVE 380
Query: 568 ---DVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQN 624
D +M YK E+F PV L ++ L++AI++ N + A++F + R+
Sbjct: 381 APADRVKDMVLYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVR 440
Query: 625 EIEARLVGINVPVPSS------FSSINESGEFNFCGKSGVQFYTQIKTVAQQWN 672
+E + IN +P F +SG F V+ T KT+ +
Sbjct: 441 LLEVGAIYIN-DMPRHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIVFNYK 493
>pdb|1UXN|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXP|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXQ|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXR|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXT|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-phosphorylating
Glyceraldehyde-3-phosphate Dehydrogenase (gapn) From
Thermoproteus Tenax
pdb|1UXU|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
Length = 501
Score = 127 bits (320), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 118/474 (24%), Positives = 212/474 (44%), Gaps = 34/474 (7%)
Query: 219 IDVINPATQEVGSQVPLTTYEEFKDAVDAA-KRAFPAWKNTPVATRQRIMFKLQELIRRD 277
I+V +P ++V + EE + +D KR + ++ P R ++ K ++I R+
Sbjct: 34 IEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRWSARDMPGTERLAVLRKAADIIERN 93
Query: 278 IDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVPNALC--GLDTYCF- 334
+D A + + G AA +V ++ + A G+++P L+T
Sbjct: 94 LDVFAEVLVMNAGKPKSAAVGEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLV 153
Query: 335 -REPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLP 393
REPLGV A I PFN+P + + + GN ++KPS +P + + ++AG P
Sbjct: 154 RREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFP 213
Query: 394 DGVLNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAARG--KRVQSNRGGKNY 451
+ +++ I D+ + A+SF T S ++ R G K+ GG +
Sbjct: 214 PDAIALLNLPGKEAEKIVADDRVAAVSF----TGSTEVGERVVKVGGVKQYVMELGGGDP 269
Query: 452 AIIMPDASIDATLNALVSAGFGAAGERCTALSTAV----FVGSSVQWEDELVELAKALKV 507
AI++ DA +D + + + AG+RC A+ + G V+ E+ + +L+V
Sbjct: 270 AIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVE---EVAKRLSSLRV 326
Query: 508 NVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILR 567
D + DVGP++S D++ I++AV+ G +L GR + +V PT +
Sbjct: 327 GDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRL------GPTYVQPTFVE 380
Query: 568 ---DVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQN 624
D +M YK E+F PV L ++ L++AI++ N + A++F + R+
Sbjct: 381 APADRVKDMVLYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVR 440
Query: 625 EIEARLVGINVPVPSS------FSSINESGEFNFCGKSGVQFYTQIKTVAQQWN 672
+E + IN +P F +SG F V+ T KT+ +
Sbjct: 441 LLEVGAIYIN-DMPRHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIVFNYK 493
>pdb|1KY8|A Chain A, Crystal Structure Of The Non-Phosphorylating
Glyceraldehyde-3- Phosphate Dehydrogenase
Length = 501
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 117/474 (24%), Positives = 212/474 (44%), Gaps = 34/474 (7%)
Query: 219 IDVINPATQEVGSQVPLTTYEEFKDAVDAA-KRAFPAWKNTPVATRQRIMFKLQELIRRD 277
I+V +P ++V + EE + +D KR + ++ P R ++ K ++I R+
Sbjct: 34 IEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRWSARDMPGTERLAVLRKAADIIERN 93
Query: 278 IDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVPNALC--GLDTYCF- 334
+D A + + G AA +V ++ + A G+++P L+T
Sbjct: 94 LDVFAEVLVMNAGKPKSAAVGEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLV 153
Query: 335 -REPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLP 393
REPLGV A I PFN+P + + + GN ++KPS +P + + ++AG P
Sbjct: 154 RREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFP 213
Query: 394 DGVLNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAARG--KRVQSNRGGKNY 451
+ +++ I D+ + A+SF T S ++ R G K+ GG +
Sbjct: 214 PDAIALLNLPGKEAEKIVADDRVAAVSF----TGSTEVGERVVKVGGVKQYVMELGGGDP 269
Query: 452 AIIMPDASIDATLNALVSAGFGAAGERCTALSTAV----FVGSSVQWEDELVELAKALKV 507
AI++ DA +D + + + AG+RC A+ + G V+ E+ + +L+V
Sbjct: 270 AIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVE---EVAKRLSSLRV 326
Query: 508 NVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILR 567
D + DVGP++S D++ I++AV+ G +L GR + +V PT++
Sbjct: 327 GDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRL------GPTYVQPTLVE 380
Query: 568 ---DVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQN 624
D +M YK E+F PV ++ L++AI++ N + A++F + R+
Sbjct: 381 APADRVKDMVLYKREVFAPVASAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVR 440
Query: 625 EIEARLVGINVPVPSS------FSSINESGEFNFCGKSGVQFYTQIKTVAQQWN 672
+E + IN +P F +SG F V+ T KT+ +
Sbjct: 441 LLEVGAIYIN-DMPRHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIVFNYK 493
>pdb|3JU8|A Chain A, Crystal Structure Of Succinylglutamic Semialdehyde
Dehydrogenase From Pseudomonas Aeruginosa.
pdb|3JU8|B Chain B, Crystal Structure Of Succinylglutamic Semialdehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 124 bits (311), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 114/467 (24%), Positives = 200/467 (42%), Gaps = 31/467 (6%)
Query: 203 SNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVAT 262
+++I G+++ +G T++ ++P Q V + AV AA+ AFPAW P+
Sbjct: 7 THYIAGQWLAGQGE-TLESLDPVGQGVVWSGRGADATQVDAAVCAAREAFPAWARRPLEQ 65
Query: 263 RQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFV 322
R ++ + ++ D+LA I E G L + +V + V + + GE
Sbjct: 66 RIELLERFAATLKSRADELARVIGEETGKPLWESATEVTSXVNKVAISVQAFRERTGE-K 124
Query: 323 PNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMI 382
L +P GV A P+NFP P A+ GN + KPSE P + +
Sbjct: 125 SGPLADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPALLAGNCVVFKPSELTPKVAEL 184
Query: 383 LAALAMEAGLPDGVLNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRV 442
++AGLP GVLN+V G + + + + F SS ++++ + +++
Sbjct: 185 TLKAWIQAGLPAGVLNLVQGGRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGGQPQKI 244
Query: 443 QS-NRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWED----E 497
+ GG N ++ A +DA + ++ + F +AG+RCT + + W D
Sbjct: 245 LALEXGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGA--WGDALLAR 302
Query: 498 LVELAKALKVNVGTDASADV-GPVVSVEVKDQISRLIQNAVDNGASLLL------DGRNI 550
LV ++ L+V + A G V+S+ + + + ++ + GA LL DG +
Sbjct: 303 LVAVSATLRVGRFDEQPAPFXGAVISLSAAEHLLKAQEHLIGKGAQPLLAXTQPIDGAAL 362
Query: 551 VVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGAS 610
+ PG + DV++ E EE FGP+L ++ AI+ N ++ A
Sbjct: 363 LTPG-----------ILDVSAVAERPDEEFFGPLLQVIRYSDFAAAIREANATQYGLAAG 411
Query: 611 IFTSSGLAARKFQNEIEARLVGINVPVPSSFSSINESGEFNFCGKSG 657
+ + S +F E A +V N + S F G SG
Sbjct: 412 LLSDSRERFEQFLVESRAGIVNWN----KQLTGAASSAPFGGIGASG 454
>pdb|3ROS|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Lactobacillus Acidophilus
Length = 484
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 104/434 (23%), Positives = 188/434 (43%), Gaps = 14/434 (3%)
Query: 222 INPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKL 281
+NP T E + T ++ +A++ A + W++ A+R I+ + ++ D+L
Sbjct: 9 VNPYTNEAFASYDNPTSKQIDEAINLAHALYKKWRHEEPASRAEILHDIANALKEHEDEL 68
Query: 282 AMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVC 341
A T+E G L ++ +V + + + N+ G + Y ++ GV
Sbjct: 69 AKXXTLEXGKLLSESKEEVELCVSICNYYADHGPEXLKPTKLNSDLG-NAYYLKQSTGVI 127
Query: 342 AGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVH 401
P+NFP + +F+ GN +LK + PG++ + A + AG P+G L ++
Sbjct: 128 XACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHNVPGSAALTAKIIKRAGAPEGSLINLY 187
Query: 402 GTNDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMPDASID 461
+ D + I D I+ ++ S + A K+ GG + I++ DA
Sbjct: 188 PSYDQLADIIADPRIQGVALTGSERGGSAVAEAAGKNLKKSTXELGGNDAFIVLDDADPQ 247
Query: 462 ATLNALVSAGFGAAGERCTALSTAVFVGSSVQWEDELVELAKA---LKVNVGTDASADVG 518
N L A G+ CT+ S + V S ++++ L EL LK +A +
Sbjct: 248 VLRNVLNDARTYNDGQVCTS-SKRIIVEKS-RYDEVLHELKNVFSNLKAGDPLEADTTLP 305
Query: 519 PVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKE 578
P S + K+++ ++ A+D GA + I G F PTIL D+ + + +
Sbjct: 306 PXNSEKAKEKLEAQVKEAIDAGAKVFYQYPEID----SKGAFFRPTILTDIAKDNPVFDK 361
Query: 579 EIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPVP 638
E+FGP+ + AI++ N + + G+S+ S A+K +IE IN
Sbjct: 362 EVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGSDIDRAKKVSAQIETGXTVINGRWI 421
Query: 639 SS----FSSINESG 648
+S F I +SG
Sbjct: 422 TSGELPFGGIKKSG 435
>pdb|2J6L|A Chain A, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|B Chain B, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|C Chain C, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|D Chain D, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|E Chain E, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|F Chain F, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|G Chain G, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|H Chain H, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
Length = 500
Score = 117 bits (293), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 109/441 (24%), Positives = 193/441 (43%), Gaps = 37/441 (8%)
Query: 224 PATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAM 283
PA E ++V + ++++ V A+ A+ W + P R I+ ++ + +R I L
Sbjct: 44 PANNEPIARVRQASVADYEETVKKAREAWKIWADIPAPKRGEIVRQIGDALREKIQVLGS 103
Query: 284 NITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAG 343
+++E G L +V +++ + A ++ + G +P+ G P+G+
Sbjct: 104 LVSLEMGKILVEGVGEVQEYVDICDYAVGLSRMIGGPILPSERSGHALIEQWNPVGLVGI 163
Query: 344 ICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMI-------LAALAMEAGLPDGV 396
I FNFP W +IA+ CGN + K + P TS+I +A + + LP +
Sbjct: 164 ITAFNFPVAVYGWNNAIAMICGNVCLWKGA---PTTSLISVAVTKIIAKVLEDNKLPGAI 220
Query: 397 LNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMP 456
++ G D+ + DE + +SF S+ Q+ R R GG N I
Sbjct: 221 CSLTCGGADIGTAMAKDERVNLLSFTGSTQVGKQVGLMVQERFGRSLLELGGNNAIIAFE 280
Query: 457 DASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWEDELV-ELAKAL-KVNVGT--D 512
DA + + + + A G AG+RCT + +F+ S+ DE+V L KA ++ VG D
Sbjct: 281 DADLSLVVPSALFAAVGTAGQRCTT-ARRLFIHESIH--DEVVNRLKKAYAQIRVGNPWD 337
Query: 513 ASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSN 572
+ GP+ + + ++ A G +++ G+ + P GN+V PTI+ + +
Sbjct: 338 PNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDRP----GNYVEPTIVTGLGHD 393
Query: 573 MECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVG 632
E F P+L + + EE N + +SIFT R F R +G
Sbjct: 394 ASIAHTETFAPILYVFKFQNEEEVFAWNNEVKQGLSSSIFTKD--LGRIF------RWLG 445
Query: 633 --------INVPVPSSFSSIN 645
+NV +P+S + I
Sbjct: 446 PKGSDCGIVNVNIPTSGAEIG 466
>pdb|3LV1|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|B Chain B, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|C Chain C, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|D Chain D, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
Length = 457
Score = 97.1 bits (240), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 116/448 (25%), Positives = 203/448 (45%), Gaps = 48/448 (10%)
Query: 243 DAVDAAKRAFPAWKNTP-VATRQRIMFKLQELIRRDIDKLAMNITVEQG--------TTL 293
D++ +A++A+ A + T V R++ + +L+E + + + L + + G +
Sbjct: 31 DSLFSAQKAYFATRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKDVVDLAEI 90
Query: 294 KAAQRDVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFP--- 350
A ++ F L +++ A ++ + + + C Y +EP GV I PFN+P
Sbjct: 91 GAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSEC----YVVQEPYGVTYIIGPFNYPVNL 146
Query: 351 DMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGTNDVINHI 410
+TPL A+ GNT I+KPSE P TS ++ + EA P+ V ++ G D +H+
Sbjct: 147 TLTPLIG---AIIGGNTCIIKPSETTPETSAVIEKIIAEAFAPEYV-AVIQGGRDENSHL 202
Query: 411 CDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSA 470
I F S + AA V GGK I++PDA +D T+N L+
Sbjct: 203 L-SLPFDFIFFTGSPNVGKVVMQAAAKHLTPVVLELGGKCPLIVLPDADLDQTVNQLMFG 261
Query: 471 GFGAAGERCTALSTAVFVGSSVQWEDELVE-LAKALKVNVGTDASADVGPVVSVEVKDQI 529
F +G+ C A ++V SV+ D L+E L + +K + S G +V+ + Q+
Sbjct: 262 KFINSGQTCIA-PDYLYVHYSVK--DALLERLVERVKTELPEINST--GKLVT---ERQV 313
Query: 530 SRLIQNAVDNGASLLLDGRNIVVPGYE---NGNFVGPTILRDVTSNMECYKEEIFGPVLL 586
RL+ SLL + V+ G + + + T++ V N EE+FGP+L
Sbjct: 314 QRLV--------SLLEATQGQVLVGSQADVSKRALSATVVDGVEWNDPLMSEELFGPILP 365
Query: 587 NMQADSLEEAIKMVNRNR------FVNGASIFTSSGLAARKFQNEIEARLVGINVPVPS- 639
++ DS+ AI VN++ +V G + + G+ + + + V ++ P
Sbjct: 366 VLEFDSVRTAIDQVNKHHPKPLAVYVFGKDMDVAKGIINQIQSGDAQVNGVMLHAFSPYL 425
Query: 640 SFSSINESGEFNFCGKSGVQFYTQIKTV 667
F I SG + G +T K+V
Sbjct: 426 PFGGIGASGMGEYHGHFSYLTFTHKKSV 453
>pdb|3HAZ|A Chain A, Crystal Structure Of Bifunctional Proline Utilization A
(Puta) Protein
pdb|3HAZ|B Chain B, Crystal Structure Of Bifunctional Proline Utilization A
(Puta) Protein
Length = 1001
Score = 96.7 bits (239), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 130/276 (47%), Gaps = 21/276 (7%)
Query: 339 GVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLN 398
GV I P+NFP L + A+ GN+ + KP+E+ P + AL EAG+P L
Sbjct: 651 GVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLHEAGIPKSALY 710
Query: 399 IVHGTNDVINHICDDEDIKAISFVASSTASVQM-YARAAARGKRVQ--SNRGGKNYAIIM 455
+V G + + DI + F S+ + + A AA G V + GG N I
Sbjct: 711 LVTGDGRIGAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIAD 770
Query: 456 PDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWEDELVEL----AKALKVNVGT 511
A + + +V++ F +AG+RC+AL +FV V D ++E+ A+ LK+ +
Sbjct: 771 ATALPEQVADDVVTSAFRSAGQRCSALRL-LFVQEDVA--DRMIEMVAGAARELKIGDPS 827
Query: 512 DASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTS 571
D + VGPV+ VE K ++ I + A L G P E G FV P I +
Sbjct: 828 DVATHVGPVIDVEAKQRLDAHIAR-MKTEARLHFAG-----PAPE-GCFVAPHIFELTEA 880
Query: 572 NMECYKEEIFGPVL--LNMQADSLEEAIKMVNRNRF 605
EE+FGP+L + + ++LE ++ + R +
Sbjct: 881 GQ--LTEEVFGPILHVVRYRPENLERVLRAIERTGY 914
>pdb|3LNS|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|B Chain B, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|C Chain C, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|D Chain D, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
Length = 457
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 115/448 (25%), Positives = 202/448 (45%), Gaps = 48/448 (10%)
Query: 243 DAVDAAKRAFPAWKNTP-VATRQRIMFKLQELIRRDIDKLAMNITVEQG--------TTL 293
D++ +A++A+ A + T V R++ + +L+E + + + L + + G +
Sbjct: 31 DSLFSAQKAYFATRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKDVVDLAEI 90
Query: 294 KAAQRDVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFP--- 350
A ++ F L +++ A ++ + + + C Y +EP GV I PFN+P
Sbjct: 91 GAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSEC----YVVQEPYGVTYIIGPFNYPVNL 146
Query: 351 DMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGTNDVINHI 410
+TPL A+ GNT I+KPSE P TS ++ + EA P+ V ++ G D +H+
Sbjct: 147 TLTPLIG---AIIGGNTCIIKPSETTPETSAVIEKIIAEAFAPEYV-AVIQGGRDENSHL 202
Query: 411 CDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSA 470
I F S + AA V GGK I++PDA +D T+N L+
Sbjct: 203 L-SLPFDFIFFTGSPNVGKVVMQAAAKHLTPVVLELGGKCPLIVLPDADLDQTVNQLMFG 261
Query: 471 GFGAAGERCTALSTAVFVGSSVQWEDELVE-LAKALKVNVGTDASADVGPVVSVEVKDQI 529
F +G+ A ++V SV+ D L+E L + +K + S G +V+ + Q+
Sbjct: 262 KFINSGQTXIA-PDYLYVHYSVK--DALLERLVERVKTELPEINST--GKLVT---ERQV 313
Query: 530 SRLIQNAVDNGASLLLDGRNIVVPGYE---NGNFVGPTILRDVTSNMECYKEEIFGPVLL 586
RL+ SLL + V+ G + + + T++ V N EE+FGP+L
Sbjct: 314 QRLV--------SLLEATQGQVLVGSQADVSKRALSATVVDGVEWNDPLMSEELFGPILP 365
Query: 587 NMQADSLEEAIKMVNRNR------FVNGASIFTSSGLAARKFQNEIEARLVGINVPVPS- 639
++ DS+ AI VN++ +V G + + G+ + + + V ++ P
Sbjct: 366 VLEFDSVRTAIDQVNKHHPKPLAVYVFGKDMDVAKGIINQIQSGDAQVNGVMLHAFSPYL 425
Query: 640 SFSSINESGEFNFCGKSGVQFYTQIKTV 667
F I SG + G +T K+V
Sbjct: 426 PFGGIGASGMGEYHGHFSYLTFTHKKSV 453
>pdb|1AD3|A Chain A, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide-
Adenine-Dinucleotide
pdb|1AD3|B Chain B, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide-
Adenine-Dinucleotide
Length = 452
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 96/347 (27%), Positives = 151/347 (43%), Gaps = 32/347 (9%)
Query: 330 DTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALA-- 387
D Y EPLGV I +N+P + AV GN ILKPSE + + +LA L
Sbjct: 96 DLYIHSEPLGVVLVIGAWNYPFNLTIQPMVGAVAAGNAVILKPSEVSGHMADLLATLIPQ 155
Query: 388 -MEAGLPDGVLNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNR 446
M+ L V V T +++ E I + S+ + A AA V
Sbjct: 156 YMDQNLYLVVKGGVPETTELLK-----ERFDHIMYTGSTAVGKIVMAAAAKHLTPVTLEL 210
Query: 447 GGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWEDELVE-LAKAL 505
GGK+ + D +D + F +G+ C A + S+Q +++VE L K+L
Sbjct: 211 GGKSPCYVDKDCDLDVACRRIAWGKFMNSGQTCVA-PDYILCDPSIQ--NQIVEKLKKSL 267
Query: 506 KVNVGTDA--SADVGPVVSVEVKDQISRLIQN-AVDNGASLLLDGRNIVVPGYENGNFVG 562
K G DA S D G +++ ++ LI N V +G + R ++
Sbjct: 268 KDFYGEDAKQSRDYGRIINDRHFQRVKGLIDNQKVAHGGTWDQSSR-----------YIA 316
Query: 563 PTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKF 622
PTIL DV +EEIFGPV+ + SLEEAI+ +N+ +F+++ +K
Sbjct: 317 PTILVDVDPQSPVMQEEIFGPVMPIVCVRSLEEAIQFINQREKPLALYVFSNNEKVIKKM 376
Query: 623 QNE-----IEARLVGINVPVPS-SFSSINESGEFNFCGKSGVQFYTQ 663
E + A V +++ VP+ F + SG + GK + ++
Sbjct: 377 IAETSSGGVTANDVIVHITVPTLPFGGVGNSGMGAYHGKKSFETFSH 423
>pdb|3SZA|A Chain A, Crystal Structure Of Human Aldh3a1 - Apo Form
pdb|3SZA|B Chain B, Crystal Structure Of Human Aldh3a1 - Apo Form
pdb|3SZB|A Chain A, Crystal Structure Of Human Aldh3a1 Modified With The
Beta-Elimination Product Of Aldi-1; 1-Phenyl-
2-Propen-1-One
pdb|3SZB|B Chain B, Crystal Structure Of Human Aldh3a1 Modified With The
Beta-Elimination Product Of Aldi-1; 1-Phenyl-
2-Propen-1-One
Length = 469
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 109/444 (24%), Positives = 191/444 (43%), Gaps = 42/444 (9%)
Query: 240 EFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVE-QGTTLKAAQR 298
+ +AV A+ AF + + P+ R + + LQ LI+ +L + + A
Sbjct: 19 KISEAVKRARAAFSSGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYE 78
Query: 299 DVLFGLEVVEQAC----AVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTP 354
+V++ LE +E A + E P + Y EPLGV I +N+P
Sbjct: 79 EVVYVLEEIEYMIQKLPEWAADEPVEKTPQTQQD-ELYIHSEPLGVVLVIGTWNYPFNLT 137
Query: 355 LWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHG----TNDVINHI 410
+ A+ GN +LKPSE + + +LA + + L + +++G T +++
Sbjct: 138 IQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQY-LDKDLYPVINGGVPETTELLK-- 194
Query: 411 CDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSA 470
E I + S+ + AA V GGK+ + + +D +
Sbjct: 195 ---ERFDHILYTGSTGVGKIIMTAAAKHLTPVTLELGGKSPCYVDKNCDLDVACRRIAWG 251
Query: 471 GFGAAGERCTALSTAVFVGSSVQWEDELVE-LAKALKVNVGTDA--SADVGPVVSVEVKD 527
F +G+ C A + S+Q +++VE L K+LK G DA S D G ++S
Sbjct: 252 KFMNSGQTCVA-PDYILCDPSIQ--NQIVEKLKKSLKEFYGEDAKKSRDYGRIIS----- 303
Query: 528 QISRLIQNAVDNGASLLLDGRNIVVPGYENG--NFVGPTILRDVTSNMECYKEEIFGPVL 585
+R Q + L++G+ + G + ++ PTIL DV +EEIFGPVL
Sbjct: 304 --ARHFQRVMG-----LIEGQKVAYGGTGDAATRYIAPTILTDVDPQSPVMQEEIFGPVL 356
Query: 586 LNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNE-----IEARLVGINVPVPS- 639
+ SLEEAI+ +N+ +F+S+ +K E + A V +++ + S
Sbjct: 357 PIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETSSGGVAANDVIVHITLHSL 416
Query: 640 SFSSINESGEFNFCGKSGVQFYTQ 663
F + SG ++ GK + ++
Sbjct: 417 PFGGVGNSGMGSYHGKKSFETFSH 440
>pdb|3V9J|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Sulfate Ion
pdb|3V9J|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Sulfate Ion
pdb|3V9K|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With The Product Glutamate
pdb|3V9K|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With The Product Glutamate
pdb|3V9L|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Nad+
pdb|3V9L|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Nad+
pdb|4E3X|A Chain A, Crystal Structure Of Mus Musculus
1-Pyrroline-5-Carboxylate Dehydrogenase Cryoprotected In
Proline
pdb|4E3X|B Chain B, Crystal Structure Of Mus Musculus
1-Pyrroline-5-Carboxylate Dehydrogenase Cryoprotected In
Proline
Length = 563
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 95/377 (25%), Positives = 164/377 (43%), Gaps = 29/377 (7%)
Query: 244 AVDAAKRAFPAWKNTPVATRQRIMFKLQELIR--RDIDKLAMNITVEQGTTLKAAQRDVL 301
A+DAA A W P+A R ++ K +++ R + LA + V QG T+ A+ D
Sbjct: 105 AIDAALAARKEWDLKPMADRAQVFLKAADMLSGPRRAEVLAKTM-VGQGKTVIQAEIDAA 163
Query: 302 FGLEVVEQACAVATLQI-GEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSI 360
L + A +++ GE + + +R G A I PFNF + +
Sbjct: 164 AELIDFFRFNAKFAVELEGEQPISVPPSTNHTVYRGLEGFVAAISPFNFTAIGGNLAGAP 223
Query: 361 AVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGTNDVI-NHICDDEDIKAI 419
A+ GN + KPS+ S + + EAGLP ++ V + + E + I
Sbjct: 224 ALM-GNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGI 282
Query: 420 SFVASSTASVQMYARAAARGKRVQS------NRGGKNYAIIMPDASIDATLNALVSAGFG 473
+F S ++ + A R ++ GGKN+ + A +D+ ++ + + F
Sbjct: 283 NFTGSVPTFKHLWRQVAQNLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFE 342
Query: 474 AAGERCTALSTAVFVGSSV--QWEDELVELAKALKVNVGTDASADVG----PVVSVEVKD 527
G++C+A S ++V S+ Q + L+E +KV D + D G V+ +
Sbjct: 343 YGGQKCSACSR-LYVPKSLWPQIKGRLLEEHSRIKVG---DPAEDFGTFFSAVIDAKAFA 398
Query: 528 QISRLIQNAVDN-GASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVL- 585
+I + +++A + S+L G+ GY +V P I+ KEEIFGPVL
Sbjct: 399 RIKKWLEHARSSPSLSILAGGQCNESVGY----YVEPCIIESKDPQEPIMKEEIFGPVLT 454
Query: 586 -LNMQADSLEEAIKMVN 601
D E +K+V+
Sbjct: 455 VYVYPDDKYRETLKLVD 471
>pdb|4H7N|A Chain A, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|B Chain B, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|C Chain C, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|D Chain D, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis
Length = 474
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 142/330 (43%), Gaps = 22/330 (6%)
Query: 337 PLGVCAGICPFNFP------DMTPLWMFSIAVTCGNTFILKPSEKNPG-TSMILAALAME 389
P + I P+NFP D P A+ G ++KPSE P + +L AL
Sbjct: 126 PYPLVGVISPWNFPLTLSXIDTIP------ALLAGCAVVVKPSEIAPRFVAPLLXALNTV 179
Query: 390 AGLPDGVLNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGK 449
L D VL V G + ++ + D + F S ++ AA R GGK
Sbjct: 180 PELRD-VLIFVEGGGETGANLINYVDF--VCFTGSVATGREVAETAARRFIPAYLELGGK 236
Query: 450 NYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV--QWEDELVELAKALKV 507
+ AI++ A+++ +A++ G+ C ++ ++V S ++ +L+ A L++
Sbjct: 237 DPAIVLESANLELATSAILWGAVVNTGQSCLSIER-IYVAESKFEEFYHQLIAKAHRLQL 295
Query: 508 NVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILR 567
+GP+++ + I+ I +AV+ GA + G+ V G + PT+
Sbjct: 296 AYPLVEDGAIGPIIAEKQAGIINDHILDAVEKGAVIHCGGK---VEELGGGWWCRPTVXT 352
Query: 568 DVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIE 627
+V + + EE FGP+ +EEA+ + N + A++F S A K ++
Sbjct: 353 NVNHSXKVXTEETFGPIXPVXPFPDVEEAVYLANDTIYGLSAAVFAGSEDEALKVARQLN 412
Query: 628 ARLVGINVPVPSSFSSINESGEFNFCGKSG 657
A + IN ++ E FNF G G
Sbjct: 413 AGAISINDAALTAXXHEGEKNAFNFSGLGG 442
>pdb|3V9G|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
Length = 566
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 97/401 (24%), Positives = 169/401 (42%), Gaps = 38/401 (9%)
Query: 244 AVDAAKRAFPAWKNTPVATRQRIMFKLQELIR--RDIDKLAMNITVEQGTTLKAAQRDVL 301
A++AA A W P+A R +I K +++ R + LA + V QG T+ A+ D
Sbjct: 108 AIEAALAARKEWDLKPIADRAQIFLKAADMLSGPRRAEILAKTM-VGQGKTVIQAEIDAA 166
Query: 302 FGLEVVEQACAVATLQIGEFVPNALC-GLDTYCFREPLGVCAGICPFNFPDMTPLWMFSI 360
L + A +++ P ++ ++ +R G A I PFNF + +
Sbjct: 167 AELIDFFRFNAKYAVELEGQQPISVPPSTNSTVYRGLEGFVAAISPFNFTAIGGNLAGAP 226
Query: 361 AVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGTNDVI-NHICDDEDIKAI 419
A+ GN + KPS+ S + + EAGLP ++ V + + + E + I
Sbjct: 227 ALM-GNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPLFGDTVTSSEHLCGI 285
Query: 420 SFVASSTASVQMYARAAARGKRVQS------NRGGKNYAIIMPDASIDATLNALVSAGFG 473
+F S ++ + A R + GGKN+ + A +++ ++ + + F
Sbjct: 286 NFTGSVPTFKHLWKQVAQNLDRFHTFPRLAGECGGKNFHFVHRSADVESVVSGTLRSAFE 345
Query: 474 AAGERCTALSTAVFVGSSV--QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISR 531
G++C+A S ++V S+ Q + L+E +KV D + D G S + +
Sbjct: 346 YGGQKCSACSR-LYVPHSLWPQIKGRLLEEHSRIKVG---DPAEDFGTFFSAVIDAKSFA 401
Query: 532 LIQNAVDNGAS-----LLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVL- 585
I+ +++ S +L G+ GY FV P I+ KEEIFGPVL
Sbjct: 402 RIKKWLEHARSSPSLTILAGGKCDDSVGY----FVEPCIVESKDPQEPIMKEEIFGPVLS 457
Query: 586 -LNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNE 625
D +E +++V+ TS GL F +
Sbjct: 458 VYVYPDDKYKETLQLVDST---------TSYGLTGAVFSQD 489
>pdb|3V9H|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
Length = 566
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 96/401 (23%), Positives = 169/401 (42%), Gaps = 38/401 (9%)
Query: 244 AVDAAKRAFPAWKNTPVATRQRIMFKLQELIR--RDIDKLAMNITVEQGTTLKAAQRDVL 301
A++AA A W P+A R +I K +++ R + LA + V QG T+ A+ D
Sbjct: 108 AIEAALAARKEWDLKPIADRAQIFLKAADMLSGPRRAEILAKTM-VGQGKTVIQAEIDAA 166
Query: 302 FGLEVVEQACAVATLQIGEFVPNALC-GLDTYCFREPLGVCAGICPFNFPDMTPLWMFSI 360
L + A +++ P ++ ++ +R G A I PFNF + +
Sbjct: 167 AELIDFFRFNAKYAVELEGQQPISVPPSTNSTVYRGLEGFVAAISPFNFTAIGGNLAGAP 226
Query: 361 AVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGTNDVI-NHICDDEDIKAI 419
A+ GN + KPS+ S + + EAGLP ++ V + + + E + I
Sbjct: 227 ALM-GNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPLFGDTVTSSEHLCGI 285
Query: 420 SFVASSTASVQMYARAAARGKRVQS------NRGGKNYAIIMPDASIDATLNALVSAGFG 473
+F S ++ + A R + GGKN+ + A +++ ++ + + F
Sbjct: 286 NFTGSVPTFKHLWKQVAQNLDRFHTFPRLAGECGGKNFHFVHRSADVESVVSGTLRSAFE 345
Query: 474 AAGERCTALSTAVFVGSSV--QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISR 531
G++C+A + ++V S+ Q + L+E +KV D + D G S + +
Sbjct: 346 YGGQKCSACAR-LYVPHSLWPQIKGRLLEEHSRIKVG---DPAEDFGTFFSAVIDAKSFA 401
Query: 532 LIQNAVDNGAS-----LLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVL- 585
I+ +++ S +L G+ GY FV P I+ KEEIFGPVL
Sbjct: 402 RIKKWLEHARSSPSLTILAGGKCDDSVGY----FVEPCIVESKDPQEPIMKEEIFGPVLS 457
Query: 586 -LNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNE 625
D +E +++V+ TS GL F +
Sbjct: 458 VYVYPDDKYKETLQLVDST---------TSYGLTGAVFSQD 489
>pdb|3V9I|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
Length = 566
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 96/401 (23%), Positives = 168/401 (41%), Gaps = 38/401 (9%)
Query: 244 AVDAAKRAFPAWKNTPVATRQRIMFKLQELIR--RDIDKLAMNITVEQGTTLKAAQRDVL 301
A++AA A W P+A R +I K +++ R + LA + V QG T+ A+ D
Sbjct: 108 AIEAALAARKEWDLKPIADRAQIFLKAADMLSGPRRAEILAKTM-VGQGKTVIQAEIDAA 166
Query: 302 FGLEVVEQACAVATLQIGEFVPNALC-GLDTYCFREPLGVCAGICPFNFPDMTPLWMFSI 360
L + A +++ P ++ ++ +R G A I PFNF + +
Sbjct: 167 AELIDFFRFNAKYAVELEGQQPISVPPSTNSTVYRGLEGFVAAISPFNFTAIGGNLAGAP 226
Query: 361 AVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGTNDVI-NHICDDEDIKAI 419
A+ GN + KPS+ S + + EAGLP ++ V + + + E + I
Sbjct: 227 ALM-GNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPLFGDTVTSSEHLCGI 285
Query: 420 SFVASSTASVQMYARAAARGKRVQS------NRGGKNYAIIMPDASIDATLNALVSAGFG 473
+F S ++ + A R + GGKN+ + A +++ ++ + + F
Sbjct: 286 NFTGSVPTFKHLWKQVAQNLDRFHTFPRLAGECGGKNFHFVHRSADVESVVSGTLRSAFE 345
Query: 474 AAGERCTALSTAVFVGSSV--QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISR 531
G++C+A ++V S+ Q + L+E +KV D + D G S + +
Sbjct: 346 YGGQKCSA-CLRLYVPHSLWPQIKGRLLEEHSRIKVG---DPAEDFGTFFSAVIDAKSFA 401
Query: 532 LIQNAVDNGAS-----LLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVL- 585
I+ +++ S +L G+ GY FV P I+ KEEIFGPVL
Sbjct: 402 RIKKWLEHARSSPSLTILAGGKCDDSVGY----FVEPCIVESKDPQEPIMKEEIFGPVLS 457
Query: 586 -LNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNE 625
D +E +++V+ TS GL F +
Sbjct: 458 VYVYPDDKYKETLQLVDST---------TSYGLTGAVFSQD 489
>pdb|3V4C|A Chain A, Crystal Structure Of A Semialdehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|3V4C|B Chain B, Crystal Structure Of A Semialdehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
Length = 528
Score = 37.7 bits (86), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 112/285 (39%), Gaps = 39/285 (13%)
Query: 335 REPLGVCAGICPFNFPDM--TPLWMFSIAVTCGNTFILKPSEKNPGTSMILA----ALAM 388
+ P+G A NFP T + A+ G ++K +PGT I+A A
Sbjct: 167 QRPVGPVAVFGASNFPLAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIR 226
Query: 389 EAGLPDGVLNIVHG-TNDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQ--SN 445
+ G+ GV +++ G + DV + + IKA+ F S ++ AAR + +
Sbjct: 227 KTGVHPGVFSLIQGGSRDVGHALVQHPHIKAVGFTGSLAGGRALFDLCAARPEPIPFFGE 286
Query: 446 RGGKNYAIIMPDASIDATLNALVSAGFG----AAGERCTALSTAVFVGSSVQWEDELVEL 501
G N ++P+A + A L G AG+ CT AV ++E
Sbjct: 287 LGSVNPXFLLPEA-LKARAETLGQGWAGSLTXGAGQFCTNPGIAV-----------VIEG 334
Query: 502 AKALK-VNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVP---GYEN 557
A A + +A A V P + D I++ ++ A+ RN V P +
Sbjct: 335 ADADRFTTAAVEALAKVAP--QTXLTDGIAKAYRDGQARFAT-----RNAVKPLLATESS 387
Query: 558 GNFVGPTILRDVTSNM---ECYKEEIFGPVLLNMQADSLEEAIKM 599
G P + + EE+FGP+ L ++ S E ++
Sbjct: 388 GRDASPNLFETTGAQFLADHALGEEVFGPLGLVVRVGSPAEXEEL 432
>pdb|3K9D|A Chain A, Crystal Structure Of Probable Aldehyde Dehydrogenase From
Listeria Monocytogenes Egd-E
pdb|3K9D|B Chain B, Crystal Structure Of Probable Aldehyde Dehydrogenase From
Listeria Monocytogenes Egd-E
pdb|3K9D|C Chain C, Crystal Structure Of Probable Aldehyde Dehydrogenase From
Listeria Monocytogenes Egd-E
pdb|3K9D|D Chain D, Crystal Structure Of Probable Aldehyde Dehydrogenase From
Listeria Monocytogenes Egd-E
Length = 464
Score = 37.7 bits (86), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 9/82 (10%)
Query: 337 PLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPS----EKNPGTSMILAALAMEAGL 392
PLGV AG+ P P T ++ I++ GN+ + P + T I++ A +AG
Sbjct: 108 PLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISEAAEKAGC 167
Query: 393 PDGVLN-----IVHGTNDVINH 409
P G ++ + GT+ ++ H
Sbjct: 168 PKGAISCMTVPTIQGTDQLMKH 189
>pdb|1R4M|A Chain A, Appbp1-Uba3-Nedd8, An E1-Ubiquitin-Like Protein Complex
pdb|1R4M|C Chain C, Appbp1-Uba3-Nedd8, An E1-Ubiquitin-Like Protein Complex
pdb|1R4M|E Chain E, Appbp1-Uba3-Nedd8, An E1-Ubiquitin-Like Protein Complex
pdb|1R4M|G Chain G, Appbp1-Uba3-Nedd8, An E1-Ubiquitin-Like Protein Complex
pdb|1R4N|A Chain A, Appbp1-Uba3-Nedd8, An E1-Ubiquitin-Like Protein Complex
With Atp
pdb|1R4N|C Chain C, Appbp1-Uba3-Nedd8, An E1-Ubiquitin-Like Protein Complex
With Atp
pdb|1R4N|E Chain E, Appbp1-Uba3-Nedd8, An E1-Ubiquitin-Like Protein Complex
With Atp
pdb|1R4N|G Chain G, Appbp1-Uba3-Nedd8, An E1-Ubiquitin-Like Protein Complex
With Atp
Length = 529
Score = 32.7 bits (73), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 47/105 (44%), Gaps = 3/105 (2%)
Query: 103 EPFKDMSEHPYSRRFSEEEVKQIKLMTEAGIKPRQVLKALKQSNPELQSTPRHLYNLKAK 162
+PF ++ EH S E K I + + + ++N + T + + +
Sbjct: 187 KPFPELREHFQSYDLDHMEKKDHSHTPWIVIIAKYLAQWYSETNGRIPKTYKEKEDFRDL 246
Query: 163 IRQGNLS---EKSFKSWRPNRSTPVNTSASPSGVSPNIDNNRVSN 204
IRQG L E++F+ N +T +NT+ PS + +++R N
Sbjct: 247 IRQGILKPEDEENFEEAIKNVNTALNTTQIPSSIEDIFNDDRCIN 291
>pdb|1TT5|A Chain A, Structure Of Appbp1-Uba3-Ubc12n26: A Unique E1-E2
Interaction Required For Optimal Conjugation Of The
Ubiquitin-Like Protein Nedd8
pdb|1TT5|C Chain C, Structure Of Appbp1-Uba3-Ubc12n26: A Unique E1-E2
Interaction Required For Optimal Conjugation Of The
Ubiquitin-Like Protein Nedd8
pdb|3DBH|A Chain A, Structural Dissection Of A Gating Mechanism Preventing
Misactivation Of Ubiquitin By Nedd8's E1 (Appbp1-
Uba3arg190ala-Nedd8ala72arg)
pdb|3DBH|C Chain C, Structural Dissection Of A Gating Mechanism Preventing
Misactivation Of Ubiquitin By Nedd8's E1 (Appbp1-
Uba3arg190ala-Nedd8ala72arg)
pdb|3DBH|E Chain E, Structural Dissection Of A Gating Mechanism Preventing
Misactivation Of Ubiquitin By Nedd8's E1 (Appbp1-
Uba3arg190ala-Nedd8ala72arg)
pdb|3DBH|G Chain G, Structural Dissection Of A Gating Mechanism Preventing
Misactivation Of Ubiquitin By Nedd8's E1 (Appbp1-
Uba3arg190ala-Nedd8ala72arg)
pdb|3DBL|A Chain A, Structural Dissection Of A Gating Mechanism Preventing
Misactivation Of Ubiquitin By Nedd8's E1 (Appbp1-
Uba3arg190wt-Nedd8ala72gln)
pdb|3DBL|C Chain C, Structural Dissection Of A Gating Mechanism Preventing
Misactivation Of Ubiquitin By Nedd8's E1 (Appbp1-
Uba3arg190wt-Nedd8ala72gln)
pdb|3DBL|E Chain E, Structural Dissection Of A Gating Mechanism Preventing
Misactivation Of Ubiquitin By Nedd8's E1 (Appbp1-
Uba3arg190wt-Nedd8ala72gln)
pdb|3DBL|G Chain G, Structural Dissection Of A Gating Mechanism Preventing
Misactivation Of Ubiquitin By Nedd8's E1 (Appbp1-
Uba3arg190wt-Nedd8ala72gln)
pdb|3DBR|A Chain A, Structural Dissection Of A Gating Mechanism Preventing
Misactivation Of Ubiquitin By Nedd8's E1 (Appbp1-
Uba3arg190gln-Nedd8ala72arg)
pdb|3DBR|C Chain C, Structural Dissection Of A Gating Mechanism Preventing
Misactivation Of Ubiquitin By Nedd8's E1 (Appbp1-
Uba3arg190gln-Nedd8ala72arg)
pdb|3DBR|E Chain E, Structural Dissection Of A Gating Mechanism Preventing
Misactivation Of Ubiquitin By Nedd8's E1 (Appbp1-
Uba3arg190gln-Nedd8ala72arg)
pdb|3DBR|G Chain G, Structural Dissection Of A Gating Mechanism Preventing
Misactivation Of Ubiquitin By Nedd8's E1 (Appbp1-
Uba3arg190gln-Nedd8ala72arg)
Length = 531
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 47/105 (44%), Gaps = 3/105 (2%)
Query: 103 EPFKDMSEHPYSRRFSEEEVKQIKLMTEAGIKPRQVLKALKQSNPELQSTPRHLYNLKAK 162
+PF ++ EH S E K I + + + ++N + T + + +
Sbjct: 189 KPFPELREHFQSYDLDHMEKKDHSHTPWIVIIAKYLAQWYSETNGRIPKTYKEKEDFRDL 248
Query: 163 IRQGNLS---EKSFKSWRPNRSTPVNTSASPSGVSPNIDNNRVSN 204
IRQG L E++F+ N +T +NT+ PS + +++R N
Sbjct: 249 IRQGILKPEDEENFEEAIKNVNTALNTTQIPSSIEDIFNDDRCIN 293
>pdb|2HT1|A Chain A, The Closed Ring Structure Of The Rho Transcription
Termination Factor In Complex With Nucleic Acid In The
Motor Domains
pdb|2HT1|B Chain B, The Closed Ring Structure Of The Rho Transcription
Termination Factor In Complex With Nucleic Acid In The
Motor Domains
Length = 433
Score = 32.3 bits (72), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 43/107 (40%), Gaps = 11/107 (10%)
Query: 179 NRSTPVNTSASPSGVSPNIDNNRVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTY 238
N P + GV N + F + V+ GS TI I A + GS++ Y
Sbjct: 297 NTVVPASGKVLTGGVDANALHRPKRFFGAARNVEEGGSLTI--IATALIDTGSKMDEVIY 354
Query: 239 EEFKDAVD---------AAKRAFPAWKNTPVATRQRIMFKLQELIRR 276
EEFK + A KR FPA TR+ + QE +++
Sbjct: 355 EEFKGTGNMELHLSRKIAEKRVFPAIDYNRSGTRKEELLTTQEELQK 401
>pdb|1PVO|A Chain A, X-Ray Crystal Structure Of Rho Transcription Termination
Factor In Complex With Ssrna Substrate And Anppnp
pdb|1PVO|B Chain B, X-Ray Crystal Structure Of Rho Transcription Termination
Factor In Complex With Ssrna Substrate And Anppnp
pdb|1PVO|C Chain C, X-Ray Crystal Structure Of Rho Transcription Termination
Factor In Complex With Ssrna Substrate And Anppnp
pdb|1PVO|D Chain D, X-Ray Crystal Structure Of Rho Transcription Termination
Factor In Complex With Ssrna Substrate And Anppnp
pdb|1PVO|E Chain E, X-Ray Crystal Structure Of Rho Transcription Termination
Factor In Complex With Ssrna Substrate And Anppnp
pdb|1PVO|F Chain F, X-Ray Crystal Structure Of Rho Transcription Termination
Factor In Complex With Ssrna Substrate And Anppnp
pdb|1XPR|A Chain A, Structural Mechanism Of Inhibition Of The Rho
Transcription Termination Factor By The Antibiotic
5a-formylbicyclomycin (fb)
pdb|1XPR|B Chain B, Structural Mechanism Of Inhibition Of The Rho
Transcription Termination Factor By The Antibiotic
5a-formylbicyclomycin (fb)
pdb|1XPR|C Chain C, Structural Mechanism Of Inhibition Of The Rho
Transcription Termination Factor By The Antibiotic
5a-formylbicyclomycin (fb)
pdb|1XPR|D Chain D, Structural Mechanism Of Inhibition Of The Rho
Transcription Termination Factor By The Antibiotic
5a-formylbicyclomycin (fb)
pdb|1XPR|E Chain E, Structural Mechanism Of Inhibition Of The Rho
Transcription Termination Factor By The Antibiotic
5a-formylbicyclomycin (fb)
pdb|1XPR|F Chain F, Structural Mechanism Of Inhibition Of The Rho
Transcription Termination Factor By The Antibiotic
5a-formylbicyclomycin (fb)
pdb|1XPU|A Chain A, Structural Mechanism Of Inhibition Of The Rho
Transcription Termination Factor By The Antibiotic
5a-(3-Formylphenylsulfanyl)- Dihydrobicyclomycin (Fpdb)
pdb|1XPU|B Chain B, Structural Mechanism Of Inhibition Of The Rho
Transcription Termination Factor By The Antibiotic
5a-(3-Formylphenylsulfanyl)- Dihydrobicyclomycin (Fpdb)
pdb|1XPU|C Chain C, Structural Mechanism Of Inhibition Of The Rho
Transcription Termination Factor By The Antibiotic
5a-(3-Formylphenylsulfanyl)- Dihydrobicyclomycin (Fpdb)
pdb|1XPU|D Chain D, Structural Mechanism Of Inhibition Of The Rho
Transcription Termination Factor By The Antibiotic
5a-(3-Formylphenylsulfanyl)- Dihydrobicyclomycin (Fpdb)
pdb|1XPU|E Chain E, Structural Mechanism Of Inhibition Of The Rho
Transcription Termination Factor By The Antibiotic
5a-(3-Formylphenylsulfanyl)- Dihydrobicyclomycin (Fpdb)
pdb|1XPU|F Chain F, Structural Mechanism Of Inhibition Of The Rho
Transcription Termination Factor By The Antibiotic
5a-(3-Formylphenylsulfanyl)- Dihydrobicyclomycin (Fpdb)
pdb|1XPO|A Chain A, Structural Mechanism Of Inhibition Of The Rho
Transcription Termination Factor By The Antibiotic
Bicyclomycin
pdb|1XPO|B Chain B, Structural Mechanism Of Inhibition Of The Rho
Transcription Termination Factor By The Antibiotic
Bicyclomycin
pdb|1XPO|C Chain C, Structural Mechanism Of Inhibition Of The Rho
Transcription Termination Factor By The Antibiotic
Bicyclomycin
pdb|1XPO|D Chain D, Structural Mechanism Of Inhibition Of The Rho
Transcription Termination Factor By The Antibiotic
Bicyclomycin
pdb|1XPO|E Chain E, Structural Mechanism Of Inhibition Of The Rho
Transcription Termination Factor By The Antibiotic
Bicyclomycin
pdb|1XPO|F Chain F, Structural Mechanism Of Inhibition Of The Rho
Transcription Termination Factor By The Antibiotic
Bicyclomycin
Length = 419
Score = 32.0 bits (71), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 43/107 (40%), Gaps = 11/107 (10%)
Query: 179 NRSTPVNTSASPSGVSPNIDNNRVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTY 238
N P + GV N + F + V+ GS TI I A + GS++ Y
Sbjct: 275 NTVVPASGKVLTGGVDANALHRPKRFFGAARNVEEGGSLTI--IATALIDTGSKMDEVIY 332
Query: 239 EEFKDAVD---------AAKRAFPAWKNTPVATRQRIMFKLQELIRR 276
EEFK + A KR FPA TR+ + QE +++
Sbjct: 333 EEFKGTGNMELHLSRKIAEKRVFPAIDYNRSGTRKEELLTTQEELQK 379
>pdb|3ICE|A Chain A, Rho Transcription Termination Factor Bound To Rna And
Adp-Bef3
pdb|3ICE|B Chain B, Rho Transcription Termination Factor Bound To Rna And
Adp-Bef3
pdb|3ICE|C Chain C, Rho Transcription Termination Factor Bound To Rna And
Adp-Bef3
pdb|3ICE|D Chain D, Rho Transcription Termination Factor Bound To Rna And
Adp-Bef3
pdb|3ICE|E Chain E, Rho Transcription Termination Factor Bound To Rna And
Adp-Bef3
pdb|3ICE|F Chain F, Rho Transcription Termination Factor Bound To Rna And
Adp-Bef3
Length = 422
Score = 30.8 bits (68), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 42/107 (39%), Gaps = 11/107 (10%)
Query: 179 NRSTPVNTSASPSGVSPNIDNNRVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTY 238
N P + GV N + F + V+ GS TI I A + GS+ Y
Sbjct: 278 NTVVPASGKVLTGGVDANALHRPKRFFGAARNVEEGGSLTI--IATALIDTGSKXDEVIY 335
Query: 239 EEFKDAVD---------AAKRAFPAWKNTPVATRQRIMFKLQELIRR 276
EEFK + A KR FPA TR+ + QE +++
Sbjct: 336 EEFKGTGNXELHLSRKIAEKRVFPAIDYNRSGTRKEELLTTQEELQK 382
>pdb|1PV4|A Chain A, X-Ray Crystal Structure Of The Rho Transcription
Termination Factor In Complex With Single Stranded Dna
pdb|1PV4|B Chain B, X-Ray Crystal Structure Of The Rho Transcription
Termination Factor In Complex With Single Stranded Dna
pdb|1PV4|C Chain C, X-Ray Crystal Structure Of The Rho Transcription
Termination Factor In Complex With Single Stranded Dna
pdb|1PV4|D Chain D, X-Ray Crystal Structure Of The Rho Transcription
Termination Factor In Complex With Single Stranded Dna
pdb|1PV4|E Chain E, X-Ray Crystal Structure Of The Rho Transcription
Termination Factor In Complex With Single Stranded Dna
pdb|1PV4|F Chain F, X-Ray Crystal Structure Of The Rho Transcription
Termination Factor In Complex With Single Stranded Dna
Length = 419
Score = 30.8 bits (68), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 42/107 (39%), Gaps = 11/107 (10%)
Query: 179 NRSTPVNTSASPSGVSPNIDNNRVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTY 238
N P + GV N + F + V+ GS TI I A + GS+ Y
Sbjct: 275 NTVVPASGKVLTGGVDANALHRPKRFFGAARNVEEGGSLTI--IATALIDTGSKXDEVIY 332
Query: 239 EEFKDAVD---------AAKRAFPAWKNTPVATRQRIMFKLQELIRR 276
EEFK + A KR FPA TR+ + QE +++
Sbjct: 333 EEFKGTGNXELHLSRKIAEKRVFPAIDYNRSGTRKEELLTTQEELQK 379
>pdb|1YOV|A Chain A, Insights Into The Ubiquitin Transfer Cascade From The
Refined Structure Of The Activating Enzyme For Nedd8
pdb|1YOV|C Chain C, Insights Into The Ubiquitin Transfer Cascade From The
Refined Structure Of The Activating Enzyme For Nedd8
Length = 537
Score = 30.4 bits (67), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 47/110 (42%), Gaps = 8/110 (7%)
Query: 103 EPFKDMSEHPYSRRFSEEEVKQIKLMTEAGIKPRQVLKALKQSNPELQSTPRHLYNLKAK 162
+PF ++ EH S E K I + + + ++N + T + + +
Sbjct: 190 KPFPELREHFQSYDLDHMEKKDHSHTPWIVIIAKYLAQWYSETNGRIPKTYKEKEDFRDL 249
Query: 163 IRQGNLS--------EKSFKSWRPNRSTPVNTSASPSGVSPNIDNNRVSN 204
IRQG L E++F+ N +T +NT+ PS + +++R N
Sbjct: 250 IRQGILKNENGAPEDEENFEEAIKNVNTALNTTQIPSSIEDIFNDDRCIN 299
>pdb|3GZN|A Chain A, Structure Of Nedd8-Activating Enzyme In Complex With Nedd8
And Mln4924
pdb|3GZN|C Chain C, Structure Of Nedd8-Activating Enzyme In Complex With Nedd8
And Mln4924
Length = 534
Score = 30.4 bits (67), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 47/110 (42%), Gaps = 8/110 (7%)
Query: 103 EPFKDMSEHPYSRRFSEEEVKQIKLMTEAGIKPRQVLKALKQSNPELQSTPRHLYNLKAK 162
+PF ++ EH S E K I + + + ++N + T + + +
Sbjct: 187 KPFPELREHFQSYDLDHMEKKDHSHTPWIVIIAKYLAQWYSETNGRIPKTYKEKEDFRDL 246
Query: 163 IRQGNLS--------EKSFKSWRPNRSTPVNTSASPSGVSPNIDNNRVSN 204
IRQG L E++F+ N +T +NT+ PS + +++R N
Sbjct: 247 IRQGILKNENGAPEDEENFEEAIKNVNTALNTTQIPSSIEDIFNDDRCIN 296
>pdb|2NVU|A Chain A, Structure Of Appbp1-Uba3~nedd8-Nedd8-Mgatp-Ubc12(C111a), A
Trapped Ubiquitin-Like Protein Activation Complex
Length = 536
Score = 30.4 bits (67), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 47/110 (42%), Gaps = 8/110 (7%)
Query: 103 EPFKDMSEHPYSRRFSEEEVKQIKLMTEAGIKPRQVLKALKQSNPELQSTPRHLYNLKAK 162
+PF ++ EH S E K I + + + ++N + T + + +
Sbjct: 189 KPFPELREHFQSYDLDHMEKKDHSHTPWIVIIAKYLAQWYSETNGRIPKTYKEKEDFRDL 248
Query: 163 IRQGNLS--------EKSFKSWRPNRSTPVNTSASPSGVSPNIDNNRVSN 204
IRQG L E++F+ N +T +NT+ PS + +++R N
Sbjct: 249 IRQGILKNENGAPEDEENFEEAIKNVNTALNTTQIPSSIEDIFNDDRCIN 298
>pdb|2H5G|A Chain A, Crystal Structure Of Human Pyrroline-5-carboxylate
Synthetase
pdb|2H5G|B Chain B, Crystal Structure Of Human Pyrroline-5-carboxylate
Synthetase
Length = 463
Score = 29.6 bits (65), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 59/128 (46%), Gaps = 7/128 (5%)
Query: 337 PLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGV 396
P+GV I + PD P + ++A+ GN +LK ++ ++ IL L EA GV
Sbjct: 140 PIGVLLVIFE-SRPDCLP-QVAALAIASGNGLLLKGGKEAAHSNRILHLLTQEALSIHGV 197
Query: 397 LNIVH--GTNDVINHICD-DEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAI 453
V T + + +C D+ I I + ++ + + AA+G V + G +
Sbjct: 198 KEAVQLVNTREEVEDLCRLDKXIDLI--IPRGSSQLVRDIQKAAKGIPVXGHSEGICHXY 255
Query: 454 IMPDASID 461
+ +AS+D
Sbjct: 256 VDSEASVD 263
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.130 0.376
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,869,053
Number of Sequences: 62578
Number of extensions: 1168467
Number of successful extensions: 3063
Number of sequences better than 100.0: 102
Number of HSP's better than 100.0 without gapping: 85
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 2640
Number of HSP's gapped (non-prelim): 116
length of query: 1035
length of database: 14,973,337
effective HSP length: 109
effective length of query: 926
effective length of database: 8,152,335
effective search space: 7549062210
effective search space used: 7549062210
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 56 (26.2 bits)