Query 001662
Match_columns 1035
No_of_seqs 392 out of 2487
Neff 6.5
Searched_HMMs 29240
Date Tue Mar 26 17:38:57 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/001662.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_957-961//hhsearch_pdb/001662hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2wme_A BADH, betaine aldehyde 1.0 1 1 826.4 54.8 472 201-673 6-485 (490)
2 4e4g_A Methylmalonate-semialde 1.0 1 1 812.5 54.6 484 189-672 14-506 (521)
3 3ed6_A Betaine aldehyde dehydr 1.0 1 1 799.5 55.3 479 193-671 24-510 (520)
4 3k2w_A Betaine-aldehyde dehydr 1.0 1 1 798.7 53.3 476 196-671 7-488 (497)
5 3r31_A BADH, betaine aldehyde 1.0 1 1 795.7 51.8 469 198-671 11-488 (517)
6 3ek1_A Aldehyde dehydrogenase; 1.0 1 1 795.6 54.0 466 200-671 31-502 (504)
7 3rh9_A Succinate-semialdehyde 1.0 1 1 795.3 54.2 469 199-671 9-484 (506)
8 3ifg_A Succinate-semialdehyde 1.0 1 1 794.9 53.9 466 200-669 11-482 (484)
9 3iwj_A Putative aminoaldehyde 1.0 1 1 792.3 58.4 471 199-671 5-489 (503)
10 3u4j_A NAD-dependent aldehyde 1.0 1 1 791.4 56.7 469 200-671 21-498 (528)
No 1
>2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A*
Probab=1.00 E-value=1 Score=826.42 Aligned_cols=472 Identities=30% Similarity=0.464 Sum_probs=445.5
Q ss_pred CCCEEECCEEECCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 43507729773089997499455999973799638999999999999998307631899999999999999999985999
Q 001662 201 RVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDK 280 (1035)
Q Consensus 201 ~i~~~I~G~~~~~~~~~~~~v~nP~tGe~i~~v~~~s~~di~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e~ 280 (1035)
..++||||+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++||+.|+.++..+|.++|++++++|++++++
T Consensus 6 ~~kl~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~e 85 (490)
T 2wme_A 6 EQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRERNDE 85 (490)
T ss_dssp CBCEECSSSEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred CCCEEECCEEECCCCCCEEEEECCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 78678998530799999897347999888899838999999999999999879870099999999999999999976999
Q ss_pred HHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCEEEEEECCCCCCHHCHHHHHH
Q ss_conf 999999992999799999-9999888999999998751183114778997512652166069987788855020488999
Q 001662 281 LAMNITVEQGTTLKAAQR-DVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFS 359 (1035)
Q Consensus 281 La~~l~~etGk~~~ea~~-Ev~~a~~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~ePlGVV~vI~P~N~Pl~~~~~~l~ 359 (1035)
|+++++.|+||++.+++. |+..+++.+++++..+....+...+.. .+...+++++|+|||++|+|||||+.+.+++++
T Consensus 86 la~~~~~e~Gk~~~ea~~~~v~~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~a 164 (490)
T 2wme_A 86 LAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLR-ETSFVYTRREPLGVVAGIGAWNYPVQIALWKSA 164 (490)
T ss_dssp HHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEEEEEE-TTEEEEEEEEECSEEEEECCSSSHHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC-CCCCEEEEECCEEEEEEECCCCCCCHHHHHHHH
T ss_conf 9999998719988998887899999999998743334467533246-874026896031699985364685111145689
Q ss_pred HHHHCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEECC-HHHHHHHHCCCCCCEEEEECCCHHHHHHHH-HHHH
Q ss_conf 99861998999089999237999999999909999857896266-355763412998069999216147899999-9982
Q 001662 360 IAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGT-NDVINHICDDEDIKAISFVASSTASVQMYA-RAAA 437 (1035)
Q Consensus 360 ~ALaaGNaVIlKPSe~ap~ta~~L~ell~eAGlP~gvv~vV~g~-~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~-~Aa~ 437 (1035)
+||++||+||+|||+.+|.++.++++++.++|+|+|++|+|+|+ .++++.|+.||+|++|+||||+.+|+.|++ ++++
T Consensus 165 ~ALaaGNtVVlKPse~tp~ta~~l~~l~~eaGlP~gv~~vv~g~g~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~~a~~ 244 (490)
T 2wme_A 165 PALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSS 244 (490)
T ss_dssp HHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHH
T ss_pred HHHHCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHCC
T ss_conf 99970996999898677799999999999819797838999678399999998398978899979858977888764306
Q ss_pred CCCCEEECCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCH-HHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 3981521289965699968999999999999997413899845785089927507-879999999975201469999988
Q 001662 438 RGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDASAD 516 (1035)
Q Consensus 438 ~lkpv~lElGGksp~IV~~dADle~Aa~~Iv~s~f~naGQ~C~a~~~ViV~~~~~-~f~e~Lv~~~~~lkvG~p~d~~~~ 516 (1035)
++||+++|||||||+||++|||++.|++.+++++|+|+||.|++++++||+++++ +|+++|+++++++++|+|.+++++
T Consensus 245 ~lk~v~lELGGk~p~iV~~dAdl~~A~~~~~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vGdp~~~~~~ 324 (490)
T 2wme_A 245 SLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDENTN 324 (490)
T ss_dssp HCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCC
T ss_pred CCCEEEEECCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
T ss_conf 88659997598475999567659999999998875368976777616425455899999999999982767797555676
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCEEECEEEECCCCCCCCCCCCCCCCCEEEEECCCHHHH
Q ss_conf 57776989999999999999987981730775444678899942504288349998822111234861269963999999
Q 001662 517 VGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEA 596 (1035)
Q Consensus 517 ~Gpli~~~~~eri~~~I~~av~~GAkvl~gG~~~~~~~~~~g~fi~PTIl~~v~~d~~i~~eEiFGPVl~V~~~~d~eEA 596 (1035)
+||+++..+++++.++|++++++|+++++||.........+|+|++||||.+++++|++++||+||||++|++|+|+|||
T Consensus 325 ~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~G~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deA 404 (490)
T 2wme_A 325 FGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEA 404 (490)
T ss_dssp BCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHCCCCCCEEEEEEECCHHHH
T ss_conf 27767899999999999988756989997784267554557875698799807998754413524778999996999999
Q ss_pred HHHHHHCCCCCEEEEECCCHHHHHHHHHCCCEEEEEECCCCC----CCCCCCCCCCCCCCCCHHHHHHCCEEEEEEEECC
Q ss_conf 999981599857999838878899987414315999929867----8878988988978674999984020409999448
Q 001662 597 IKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPVP----SSFSSINESGEFNFCGKSGVQFYTQIKTVAQQWN 672 (1035)
Q Consensus 597 I~l~N~~~~gLsasIfT~d~~~~~~~a~~l~sG~V~VN~~~~----~PfGG~~~SG~G~~~G~~g~~~ft~~k~v~~~~~ 672 (1035)
|+++|+++|||++||||+|..+++++++++++|.|+||+... +||||+|.||+|+++|.+|+++||+.|+|++++.
T Consensus 405 i~~aN~~~yGL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~PFGG~k~SG~Gre~G~~gl~~ft~~K~v~i~~g 484 (490)
T 2wme_A 405 IRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLTTLAHYTRIKSVQVELG 484 (490)
T ss_dssp HHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCCCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEECS
T ss_pred HHHHHCCCCCCEEEEECCCHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCEEEEEEECC
T ss_conf 99996699997699994999999999987876179994899877898826503150372217999999624119999788
Q ss_pred C
Q ss_conf 8
Q 001662 673 D 673 (1035)
Q Consensus 673 ~ 673 (1035)
+
T Consensus 485 ~ 485 (490)
T 2wme_A 485 D 485 (490)
T ss_dssp C
T ss_pred C
T ss_conf 8
No 2
>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti}
Probab=1.00 E-value=1 Score=812.52 Aligned_cols=484 Identities=41% Similarity=0.712 Sum_probs=456.2
Q ss_pred CCCCCCCCCCCCCCCEEECCEEECCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
Q ss_conf 99999998888743507729773089997499455999973799638999999999999998307631899999999999
Q 001662 189 SPSGVSPNIDNNRVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMF 268 (1035)
Q Consensus 189 ~~~~~~~~~~~~~i~~~I~G~~~~~~~~~~~~v~nP~tGe~i~~v~~~s~~di~~av~~Ar~A~~~W~~~s~~~R~~iL~ 268 (1035)
.+.-+|.+.++..+++||||+|+.+.++.+++++||+||+++++++.++.+++++++++|++||+.|+.++..+|.++|+
T Consensus 14 ~~~~~~~~s~m~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~ 93 (521)
T 4e4g_A 14 GTENLYFQSMMYELGHFIDGKRVAGTSGRVSNIFNPATGEVQGTVALASDADLAAAVESAKAAQPKWAATNPQRRARVFM 93 (521)
T ss_dssp ----------CEEECEEETTEEECCSSSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHH
T ss_pred CCHHHHHHHHHHCCCEEECCEEECCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
T ss_conf 72245676542205704899985289998899788999888999818999999999999999999762099999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCEEEEEECCCC
Q ss_conf 99999998599999999999299979999999998889999999987511831147789975126521660699877888
Q 001662 269 KLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFN 348 (1035)
Q Consensus 269 ~la~~L~~~~e~La~~l~~etGk~~~ea~~Ev~~a~~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~ePlGVV~vI~P~N 348 (1035)
+++++|+++.++|+++++.|+||+..+++.|+..++..++++++...+..+...+....+...+++++|+|||++|+|||
T Consensus 94 ~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN 173 (521)
T 4e4g_A 94 KFVQLLNDNMNELAEMLSREHGKTIDDAKGDIVRGLEVCEFVIGIPHLQKSEFTEGAGPGIDMYSIRQPVGIGAGITPFN 173 (521)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHHHTHHHHTCEEEEEEEETTEEEEEEEEECCEEEEECCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCEEEEECCCC
T ss_conf 99999999899999999997299989999999999999999998898705864446788850258975875799989974
Q ss_pred CCHHCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHCCCCCCEEEEECCCHHH
Q ss_conf 55020488999998619989990899992379999999999099998578962663557634129980699992161478
Q 001662 349 FPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGTNDVINHICDDEDIKAISFVASSTAS 428 (1035)
Q Consensus 349 ~Pl~~~~~~l~~ALaaGNaVIlKPSe~ap~ta~~L~ell~eAGlP~gvv~vV~g~~e~~~~L~~h~~vd~V~fTGS~~vG 428 (1035)
||+.+.++++++||++||+||+|||+.+|.++.+|++++.++|+|+|+||+|+|+.+.+.+|+.|++||+|+||||+.+|
T Consensus 174 ~P~~~~~~~~a~ALaaGN~VVlKpse~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~~~L~~~p~vd~I~FTGS~~vG 253 (521)
T 4e4g_A 174 FPGMIPMWMFAPAIACGNAFILKPSERDPSVPIRLAELMIEAGLPAGILNVVNGDKGAVDAILTHPDIAAVSFVGSTPIA 253 (521)
T ss_dssp CTTHHHHHHHHHHHHTTCEEEEECCTTSTHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTCTTCCEEEEESCHHHH
T ss_pred CHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHCCCCCEEEEECCHHHH
T ss_conf 46899999999999729979998897443999999999998497917399994886899999829896889997977999
Q ss_pred HHHHHHHHHCCCCEEECCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECC-CH-HHHHHHHHHHHHCC
Q ss_conf 99999998239815212899656999689999999999999974138998457850899275-07-87999999997520
Q 001662 429 VQMYARAAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGS-SV-QWEDELVELAKALK 506 (1035)
Q Consensus 429 ~~I~~~Aa~~lkpv~lElGGksp~IV~~dADle~Aa~~Iv~s~f~naGQ~C~a~~~ViV~~~-~~-~f~e~Lv~~~~~lk 506 (1035)
+.|+++|+++++|+++|||||||+||++|||++.|++.+++++|+|+||.|++++++||+++ ++ +|+++|++++++++
T Consensus 254 ~~i~~~aa~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~ 333 (521)
T 4e4g_A 254 RYVYGTAAMNGKRAQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGERCMAISVAVPVGEETANRLIDKLVPMVESLR 333 (521)
T ss_dssp HHHHHHHHHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTSEEEEEEBSHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHCCCCEEECCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCC
T ss_conf 99999875217870203799780898699999999999999997079997563708999171279999999999998556
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCEEECEEEECCCCCCCCCCCCCCCCCEE
Q ss_conf 14699999885777698999999999999998798173077544467889994250428834999882211123486126
Q 001662 507 VNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLL 586 (1035)
Q Consensus 507 vG~p~d~~~~~Gpli~~~~~eri~~~I~~av~~GAkvl~gG~~~~~~~~~~g~fi~PTIl~~v~~d~~i~~eEiFGPVl~ 586 (1035)
+|+|.++++++||++++.+++++.++|++++++|+++++||.....+++..|+|++||||.+++++|++++||+||||++
T Consensus 334 vG~~~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~ 413 (521)
T 4e4g_A 334 IGPYTDEKADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGHFIGGCLFDDVTPDMDIYKTEIFGPVLS 413 (521)
T ss_dssp BCCTTCTTCSBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEE
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCEECCEEEECCCCCCHHHCCCCCCCEEE
T ss_conf 78987766861787799999999999999987798899568656777678986777889973899987655744474799
Q ss_pred EEECCCHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHCCCEEEEEECCCC----C-CCCCCCCCCCCC--CCCCHHHHH
Q ss_conf 996399999999998159985799983887889998741431599992986----7-887898898897--867499998
Q 001662 587 NMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPV----P-SSFSSINESGEF--NFCGKSGVQ 659 (1035)
Q Consensus 587 V~~~~d~eEAI~l~N~~~~gLsasIfT~d~~~~~~~a~~l~sG~V~VN~~~----~-~PfGG~~~SG~G--~~~G~~g~~ 659 (1035)
|++|++++|||+++|+++|||++||||+|..++++++.++++|.|+||++. . +||||+|.||+| +++|.+|++
T Consensus 414 v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~~PfGG~k~SG~G~~~~~G~~gl~ 493 (521)
T 4e4g_A 414 VVRARNYEEALSLPMKHEYGNGVAIYTRDGDAARDFASRINIGMVGVNVPIPVPLAYHSFGGWKSSSFGDLNQHGTDSIK 493 (521)
T ss_dssp ECCBSSHHHHHHHHHHSSEESEEEEECSBHHHHHHHHHHCCCSEEEESCSSCCCCTTSCBCCEETTEESSCCBSHHHHHH
T ss_pred EEEECCHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
T ss_conf 99918999999998669998079998999999999998687636998799877877888589365788998666499999
Q ss_pred HCCEEEEEEEECC
Q ss_conf 4020409999448
Q 001662 660 FYTQIKTVAQQWN 672 (1035)
Q Consensus 660 ~ft~~k~v~~~~~ 672 (1035)
+|++.|+|+..|.
T Consensus 494 ~ft~~K~v~~~~~ 506 (521)
T 4e4g_A 494 FWTRTKTITSRWP 506 (521)
T ss_dssp HTEEEEEEEECCC
T ss_pred HHHEEEEEEEECC
T ss_conf 8630799999157
No 3
>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A*
Probab=1.00 E-value=1 Score=799.51 Aligned_cols=479 Identities=26% Similarity=0.413 Sum_probs=449.0
Q ss_pred CCCCCCCCCCCEEECCEEECCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHH--HHHHCCCHHHHHHHHHHH
Q ss_conf 999888874350772977308999749945599997379963899999999999999830--763189999999999999
Q 001662 193 VSPNIDNNRVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAF--PAWKNTPVATRQRIMFKL 270 (1035)
Q Consensus 193 ~~~~~~~~~i~~~I~G~~~~~~~~~~~~v~nP~tGe~i~~v~~~s~~di~~av~~Ar~A~--~~W~~~s~~~R~~iL~~l 270 (1035)
+|.......+++||||+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++|| +.|+.++..+|.++|+++
T Consensus 24 ~m~~~~~~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~~~w~~~~~~~R~~~L~~~ 103 (520)
T 3ed6_A 24 AMELLKHLSQRQYIDGEWVESANKNTRDIINPYNQEVIFTVSEGTKEDAERAILAARRAFESGEWSQETAETRGKKVRAI 103 (520)
T ss_dssp HHHHGGGSCCSEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHTTTTTSCHHHHHHHHHHH
T ss_pred CCCCCCCCCCCEEECCEEECCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
T ss_conf 12024566776578999843899987986888999899998289999999999999985656632219999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCEEEEEECCCCCC
Q ss_conf 99999859999999999929997999999999888999999998751183114778997512652166069987788855
Q 001662 271 QELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFP 350 (1035)
Q Consensus 271 a~~L~~~~e~La~~l~~etGk~~~ea~~Ev~~a~~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~ePlGVV~vI~P~N~P 350 (1035)
+++|+++.++|+++++.|+||++.+++.|+..++..+++++..+....+...+....+...+++++|+|||++|+|||||
T Consensus 104 a~~l~~~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P 183 (520)
T 3ed6_A 104 ADKIKEHREALARLETLDTGKTLEESYADMDDIHNVFMYFAGLADKDGGEMIDSPIPDTESKIVKEPVGVVTQITPWNYP 183 (520)
T ss_dssp HHHHHHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHTTSCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCCCCCCCCCCCEEEEECCCCCH
T ss_conf 99999869999999998709987889999999999999999988870680334677777365111476279998988657
Q ss_pred HHCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEECC-HHHHHHHHCCCCCCEEEEECCCHHHH
Q ss_conf 02048899999861998999089999237999999999909999857896266-35576341299806999921614789
Q 001662 351 DMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGT-NDVINHICDDEDIKAISFVASSTASV 429 (1035)
Q Consensus 351 l~~~~~~l~~ALaaGNaVIlKPSe~ap~ta~~L~ell~eAGlP~gvv~vV~g~-~e~~~~L~~h~~vd~V~fTGS~~vG~ 429 (1035)
+.+.++++++||++||+||+|||+.+|.++.+|++++.++|+|+|+||+|+|+ .+.+..|+.|++||+|+||||+.+|+
T Consensus 184 ~~~~~~~~apALaaGNtVVlKPs~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~~p~vd~V~FTGS~~vG~ 263 (520)
T 3ed6_A 184 LLQASWKIAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGK 263 (520)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHCCCTTSEEECCSCCTTHHHHHHHCTTCSEEEEESCHHHHH
T ss_pred HHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHCCCCCEEEEECCHHHHH
T ss_conf 99999999999974997999768765699999999999848798829998379757899997398968799779779999
Q ss_pred HHHHHHHHCCCCEEECCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCH-HHHHHHHHHHHHCCCC
Q ss_conf 999999823981521289965699968999999999999997413899845785089927507-8799999999752014
Q 001662 430 QMYARAAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVN 508 (1035)
Q Consensus 430 ~I~~~Aa~~lkpv~lElGGksp~IV~~dADle~Aa~~Iv~s~f~naGQ~C~a~~~ViV~~~~~-~f~e~Lv~~~~~lkvG 508 (1035)
.|++.|+++++|+++|||||||+||++|||++.|++.+++++|+|+||.|++++++||+++++ +|+++|+++++++++|
T Consensus 264 ~i~~~aa~~l~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~l~vG 343 (520)
T 3ed6_A 264 HIMKNAANNVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDKFEQALIDRVKKIKLG 343 (520)
T ss_dssp HHHHHHHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGTSTTCCCEEEEEHHHHHHHHHHHHHHHTTCCBC
T ss_pred HHHHHHHHCCCCEEEECCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHCCCC
T ss_conf 99998660188779976888856988999999999999999986099986668567873789999999999999855578
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCEEECEEEECCCCCCCCCCCCCCCCCEEEE
Q ss_conf 69999988577769899999999999999879817307754446788999425042883499988221112348612699
Q 001662 509 VGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNM 588 (1035)
Q Consensus 509 ~p~d~~~~~Gpli~~~~~eri~~~I~~av~~GAkvl~gG~~~~~~~~~~g~fi~PTIl~~v~~d~~i~~eEiFGPVl~V~ 588 (1035)
+|.|+++++||++++.+++++.+++++++++|+++++||.....+....|+|++||||.+++++|++++||+||||++|+
T Consensus 344 ~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~v~ 423 (520)
T 3ed6_A 344 NGFDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVE 423 (520)
T ss_dssp CTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCCCGGGTTTTCCCCEEEESCCTTSHHHHSCCCSSEEEEE
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCEECCEEEECCCCCCCCCCCCEECCEEEEE
T ss_conf 97667773555679999999999999998689999857876766557898467884773589987010671267379999
Q ss_pred ECCCHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHCCCEEEEEECCCC----CCCCCCCCCCCCCCCCCHHHHHHCCEE
Q ss_conf 6399999999998159985799983887889998741431599992986----788789889889786749999840204
Q 001662 589 QADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPV----PSSFSSINESGEFNFCGKSGVQFYTQI 664 (1035)
Q Consensus 589 ~~~d~eEAI~l~N~~~~gLsasIfT~d~~~~~~~a~~l~sG~V~VN~~~----~~PfGG~~~SG~G~~~G~~g~~~ft~~ 664 (1035)
+|+|+||||+++|+++|||+++|||+|..+++++++++++|+|+||+.. .+||||+|.||+|+++|.+++++|++.
T Consensus 424 ~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gre~G~~gl~~~t~~ 503 (520)
T 3ed6_A 424 GFETEQEAIQLANDSIYGLAGAVFSKDIGKAQRVANKLKLGTVWINDFHPYFAQAPWGGYKQSGIGRELGKEGLEEYLVS 503 (520)
T ss_dssp EESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESCSCCCCTTSCBCCSGGGEESCBSHHHHHHTTEEE
T ss_pred EECCHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCE
T ss_conf 96999999999857999807999879999999999878746699889888889988288376727866549999985166
Q ss_pred EEEEEEC
Q ss_conf 0999944
Q 001662 665 KTVAQQW 671 (1035)
Q Consensus 665 k~v~~~~ 671 (1035)
|+|+..+
T Consensus 504 k~v~~~~ 510 (520)
T 3ed6_A 504 KHILTNT 510 (520)
T ss_dssp EEEEEES
T ss_pred EEEEECC
T ss_conf 9999927
No 4
>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C}
Probab=1.00 E-value=1 Score=798.66 Aligned_cols=476 Identities=29% Similarity=0.437 Sum_probs=447.6
Q ss_pred CCCCCCCCEEECCEEECCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Q ss_conf 88887435077297730899974994559999737996389999999999999983076318999999999999999999
Q 001662 196 NIDNNRVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIR 275 (1035)
Q Consensus 196 ~~~~~~i~~~I~G~~~~~~~~~~~~v~nP~tGe~i~~v~~~s~~di~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~ 275 (1035)
+.+...+++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+.|+.++.++|.++|++++++|+
T Consensus 7 ~~~~~~~~~~I~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~ 86 (497)
T 3k2w_A 7 DLHFKNKVNFIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKADAENALEVAQAAQKAWAKLTARTRQNMLRTFANKIR 86 (497)
T ss_dssp CCCCCTTCEEETTEEECCSSCCEEEEECSSSCSEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCEEECCEEECCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_conf 65554566458999853899987997888998889998389999999999999999987440999999999999999999
Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCEEEEEECCCCCCHHCHH
Q ss_conf 85999999999992999799999999988899999999875118311477899751265216606998778885502048
Q 001662 276 RDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPL 355 (1035)
Q Consensus 276 ~~~e~La~~l~~etGk~~~ea~~Ev~~a~~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~ePlGVV~vI~P~N~Pl~~~~ 355 (1035)
++.++|+++++.|+||+..+++.|+..++..+++++..+....+...+....+...+++++|+|||++|+|||||+.+.+
T Consensus 87 ~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~ 166 (497)
T 3k2w_A 87 ENKHILAPMLVAEQGKLLSVAEMEVDVTATFIDYGCDNALTIEGDILPSDNQDEKIYIHKVPRGVVVGITAWNFPLALAG 166 (497)
T ss_dssp TTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHTTTTCCEEEEECSSTTEEEEEEEEECSEEEEECCSSSHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCEEEEECCCCCHHHHHH
T ss_conf 87999999999972999999999999999999999998898458503567888620489747766999898754789999
Q ss_pred HHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEECC-HHHHHHHHCCCCCCEEEEECCCHHHHHHHHH
Q ss_conf 899999861998999089999237999999999909999857896266-3557634129980699992161478999999
Q 001662 356 WMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGT-NDVINHICDDEDIKAISFVASSTASVQMYAR 434 (1035)
Q Consensus 356 ~~l~~ALaaGNaVIlKPSe~ap~ta~~L~ell~eAGlP~gvv~vV~g~-~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~~ 434 (1035)
+++++||++||+||+|||+.+|.++.+|++++.++|+|+|+||+|+|+ .+.+.+|+.|++||+|+||||+.+|+.|++.
T Consensus 167 ~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~G~~i~~~ 246 (497)
T 3k2w_A 167 RKIGPALITGNTMVLKPTQETPLATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKT 246 (497)
T ss_dssp HHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCSCTTTHHHHHHHCSSEEEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHCCCCCEEEEECCHHHHHHHHHH
T ss_conf 99988997699899978988739999999999982959384999967965799999839895879987968999999997
Q ss_pred HHHCCCCEEECCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCH-HHHHHHHHHHHHCCCCCCCCC
Q ss_conf 9823981521289965699968999999999999997413899845785089927507-879999999975201469999
Q 001662 435 AAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDA 513 (1035)
Q Consensus 435 Aa~~lkpv~lElGGksp~IV~~dADle~Aa~~Iv~s~f~naGQ~C~a~~~ViV~~~~~-~f~e~Lv~~~~~lkvG~p~d~ 513 (1035)
++++++|+++|||||||+||++|||++.|++.+++++|+|+||.|++++++||+++++ +|+++|+++++++++|+|.++
T Consensus 247 aa~~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vg~p~~~ 326 (497)
T 3k2w_A 247 SAEYMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAKFLPLVKGLKVGDPMDA 326 (497)
T ss_dssp HTTTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTSEEEEEEETTTHHHHHHHHHHHHHTCCBSCTTST
T ss_pred HHHCCCCEEEECCCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 56038876987588771687489999999999999998179997757867997378999999999999982647898777
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCEEECEEEECCCCCCCCCCCCCCCCCEEEEECCCH
Q ss_conf 98857776989999999999999987981730775444678899942504288349998822111234861269963999
Q 001662 514 SADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSL 593 (1035)
Q Consensus 514 ~~~~Gpli~~~~~eri~~~I~~av~~GAkvl~gG~~~~~~~~~~g~fi~PTIl~~v~~d~~i~~eEiFGPVl~V~~~~d~ 593 (1035)
++++||++++.+++++.+++++++++|+++++||......+...|+|++|||+.+++++|++++||+||||++|++|+++
T Consensus 327 ~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 406 (497)
T 3k2w_A 327 DSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKVSSM 406 (497)
T ss_dssp TCSBCCCSCHHHHHHHHHHHHHHHHHHCEEEECCC---------CCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESCH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCEECCEEEECCCCCCHHHCCCCCCCEEEEEEECCH
T ss_conf 78625676999999999999999977999995686577665678745687788358997576637752757999996999
Q ss_pred HHHHHHHHHCCCCCEEEEECCCHHHHHHHHHCCCEEEEEECCCCC----CCCCCCCCCCCCCCCCHHHHHHCCEEEEEEE
Q ss_conf 999999981599857999838878899987414315999929867----8878988988978674999984020409999
Q 001662 594 EEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPVP----SSFSSINESGEFNFCGKSGVQFYTQIKTVAQ 669 (1035)
Q Consensus 594 eEAI~l~N~~~~gLsasIfT~d~~~~~~~a~~l~sG~V~VN~~~~----~PfGG~~~SG~G~~~G~~g~~~ft~~k~v~~ 669 (1035)
||||+++|+++|||++||||+|.+.++++++++++|+|+||+... +||||+|.||+|+++|.+++++|++.|+|..
T Consensus 407 deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~ft~~k~v~~ 486 (497)
T 3k2w_A 407 EQAIEFCNDSIYGLSAYVHTQSFANINQAISDLEVGEVYINRGMGEQHQGFHNGWKQSGFGGEDGKFGLEQYLEKKTVYI 486 (497)
T ss_dssp HHHHHHHTCSSEESEEEEECSBHHHHHHHHHHCCSSEEEESCCSCCCTTSCBCCEETSEESCBSHHHHHHTTEEEEEEEE
T ss_pred HHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEEE
T ss_conf 99999996699883799986999999999986876279984897888888838938786875562999998346689999
Q ss_pred EC
Q ss_conf 44
Q 001662 670 QW 671 (1035)
Q Consensus 670 ~~ 671 (1035)
++
T Consensus 487 ~~ 488 (497)
T 3k2w_A 487 NE 488 (497)
T ss_dssp EC
T ss_pred EC
T ss_conf 76
No 5
>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens}
Probab=1.00 E-value=1 Score=795.69 Aligned_cols=469 Identities=26% Similarity=0.417 Sum_probs=442.1
Q ss_pred CCCCCCEEECCEEECCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 88743507729773089997499455999973799638999999999999998307631899999999999999999985
Q 001662 198 DNNRVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRD 277 (1035)
Q Consensus 198 ~~~~i~~~I~G~~~~~~~~~~~~v~nP~tGe~i~~v~~~s~~di~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~ 277 (1035)
....+++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+.|+.++.++|.++|++++++|+++
T Consensus 11 ~~~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~ 90 (517)
T 3r31_A 11 AQPKASHFIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRAQKEWAAMSPMARGRILKRAADIMRER 90 (517)
T ss_dssp TCCSSSEEETTEEECCTTSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCCEEECCEEECCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_conf 15234744899986089998899889899988999879999999999999999998753199999999999999999989
Q ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH----HCCCCCCCCCCCCCCEEEECCCEEEEEECCCCCCHHC
Q ss_conf 999999999992999799999999988899999999875----1183114778997512652166069987788855020
Q 001662 278 IDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATL----QIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMT 353 (1035)
Q Consensus 278 ~e~La~~l~~etGk~~~ea~~Ev~~a~~~l~~~~~~~~~----~~~~~~~~~~~g~~~~~~~ePlGVV~vI~P~N~Pl~~ 353 (1035)
.++|+++++.|+||+..++ |+..++..+++++..+.. ..+...+. ..+. .+++++|+|||++|+|||||+.+
T Consensus 91 ~~ela~~~~~e~Gk~~~ea--ev~~~~~~~~~~a~~~~~~~~~~~g~~~~~-~~~~-~~~~~~P~GVV~~I~PwN~P~~~ 166 (517)
T 3r31_A 91 NDALSTLETLDTGKPIQET--IVADPTSGADAFEFFGGIAPSALNGDYIPL-GGDF-AYTKRVPLGVCVGIGAWNYPQQI 166 (517)
T ss_dssp HHHHHHHHHHHHCCCHHHH--HHHSHHHHHHHHHHHHHHHHHHTCCCEEEC-SSSE-EEEEEEECSEEEEECCSSSHHHH
T ss_pred HHHHHHHHHHHHCCCHHHH--HHHHHHHHHHHHHHHHHHCCCCCCCCCCCC-CCCC-CEEEECCCCEEEEECCCCCHHHH
T ss_conf 9999999999739999999--899999999999998663301146742236-7985-25997586079998887565899
Q ss_pred HHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHCCCCCCEEEEECCCHHHHHHHH
Q ss_conf 48899999861998999089999237999999999909999857896266355763412998069999216147899999
Q 001662 354 PLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYA 433 (1035)
Q Consensus 354 ~~~~l~~ALaaGNaVIlKPSe~ap~ta~~L~ell~eAGlP~gvv~vV~g~~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~ 433 (1035)
.++++++||++||+||+|||+.+|.++.+|++++.++|+|+|+||+|+|+.+.+.+|+.|++||+|+||||+.+|+.|++
T Consensus 167 ~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~ll~eaGlP~gvv~vv~g~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~ 246 (517)
T 3r31_A 167 ACWKAAPALVAGNAMVFKPSENTPLGALKIAEILIEAGLPKGLFNVIQGDRDTGPLLVNHPDVAKVSLTGSVPTGRKVAA 246 (517)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSCSHHHHHHHHHHHTTCCTTSEEECCCCTTHHHHHHTCTTEEEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHCCCCCEEECCCCHHHHHHHHH
T ss_conf 99999999975997999848650799999999999859393128999898888999984978587962597899999999
Q ss_pred HHHHCCCCEEECCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCH-HHHHHHHHHHHHCCCCCCCC
Q ss_conf 99823981521289965699968999999999999997413899845785089927507-87999999997520146999
Q 001662 434 RAAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTD 512 (1035)
Q Consensus 434 ~Aa~~lkpv~lElGGksp~IV~~dADle~Aa~~Iv~s~f~naGQ~C~a~~~ViV~~~~~-~f~e~Lv~~~~~lkvG~p~d 512 (1035)
+|+++++|+++|||||||+||++|||++.|++.+++++|+|+||.|++++++||+++++ +|+++|+++++++++|+|.+
T Consensus 247 ~aa~~lk~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~ 326 (517)
T 3r31_A 247 AAAGHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMILGDPLD 326 (517)
T ss_dssp HHHHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHTSCCHHHHTTCEEEEEEGGGHHHHHHHHHHHHHHCCBCCTTS
T ss_pred HHHCCCCCEEEECCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCEECCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 75257981899868867589916999999999999997258885130176599707899999999999998525789877
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCEEECEEEECCCCCCCCCCCCCCCCCEEEEECCC
Q ss_conf 99885777698999999999999998798173077544467889994250428834999882211123486126996399
Q 001662 513 ASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADS 592 (1035)
Q Consensus 513 ~~~~~Gpli~~~~~eri~~~I~~av~~GAkvl~gG~~~~~~~~~~g~fi~PTIl~~v~~d~~i~~eEiFGPVl~V~~~~d 592 (1035)
+++++||++++.+++++.++|++++++|+++++|| .........|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 327 ~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG-~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 405 (517)
T 3r31_A 327 YATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGG-GIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFDD 405 (517)
T ss_dssp TTCSBCCBSCHHHHHHHHHHHHHHHHHTCEEEECC-SCCSSCCSSSBCCCCEEEEEECTTSHHHHSCCSSSEEEEEEECC
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECC-CCCCCCCCCCCEECCEEEECCCCCCCCCCCEEECCEEEEEEECC
T ss_conf 67755677699999999999999986798999788-65766578886677889946999981305610062799999499
Q ss_pred HHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHCCCEEEEEECCCCC----CCCCCCCCCCCCCCCCHHHHHHCCEEEEEE
Q ss_conf 9999999981599857999838878899987414315999929867----887898898897867499998402040999
Q 001662 593 LEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPVP----SSFSSINESGEFNFCGKSGVQFYTQIKTVA 668 (1035)
Q Consensus 593 ~eEAI~l~N~~~~gLsasIfT~d~~~~~~~a~~l~sG~V~VN~~~~----~PfGG~~~SG~G~~~G~~g~~~ft~~k~v~ 668 (1035)
+||||+++|+++|||++||||+|...++++++++++|+|+||+... +||||+|.||+|+++|.+|+++|++.|+|+
T Consensus 406 ~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~ 485 (517)
T 3r31_A 406 EDEVLARANATEFGLAGGVFTADLARAHRVVDGLEAGTLWINTYNLCPVEIPFGGSKQSGFGRENSAAALEHYSELKTVY 485 (517)
T ss_dssp HHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHSCCSEEEESSCCCCCTTSCBCCEETTEECCBSTGGGGGGSEEEEEEE
T ss_pred HHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCEEEEE
T ss_conf 99999998579998069999089999999998788565998798887888872893767778676299999861548999
Q ss_pred EEC
Q ss_conf 944
Q 001662 669 QQW 671 (1035)
Q Consensus 669 ~~~ 671 (1035)
..+
T Consensus 486 ~~~ 488 (517)
T 3r31_A 486 VST 488 (517)
T ss_dssp ECC
T ss_pred ECC
T ss_conf 957
No 6
>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308}
Probab=1.00 E-value=1 Score=795.65 Aligned_cols=466 Identities=29% Similarity=0.464 Sum_probs=443.2
Q ss_pred CCCCEEECCEEECCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 74350772977308999749945599997379963899999999999999830763189999999999999999998599
Q 001662 200 NRVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDID 279 (1035)
Q Consensus 200 ~~i~~~I~G~~~~~~~~~~~~v~nP~tGe~i~~v~~~s~~di~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e 279 (1035)
...++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|++++++|+++.+
T Consensus 31 ~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 110 (504)
T 3ek1_A 31 LKSQCLVNGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALSGWAAKTAKERAGILRKWFDLIIANAD 110 (504)
T ss_dssp CCSSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred CCCCEEECCEEEECCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 55676789998607999879988889998889983899999999999999898865109999999999999999999999
Q ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCEEEEEECCCCCCHHCHHHHHH
Q ss_conf 99999999929997999999999888999999998751183114778997512652166069987788855020488999
Q 001662 280 KLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFS 359 (1035)
Q Consensus 280 ~La~~l~~etGk~~~ea~~Ev~~a~~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~ePlGVV~vI~P~N~Pl~~~~~~l~ 359 (1035)
+|+++++.|+||+..+++.|+..++..+++++..+....+...+...++...+++++|+|||++|+|||||+.+.+++++
T Consensus 111 ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a 190 (504)
T 3ek1_A 111 DIALIMTSEQGKPLAEARGEVLYAASFIEWFAEEAKRVYGDTIPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAA 190 (504)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCEEEEEECCCCCHHHHHHHHHH
T ss_conf 99999998729999999999999999999999988872584024666665220212573289998997446899999999
Q ss_pred HHHHCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEECC-HHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHC
Q ss_conf 99861998999089999237999999999909999857896266-35576341299806999921614789999999823
Q 001662 360 IAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGT-NDVINHICDDEDIKAISFVASSTASVQMYARAAAR 438 (1035)
Q Consensus 360 ~ALaaGNaVIlKPSe~ap~ta~~L~ell~eAGlP~gvv~vV~g~-~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~~Aa~~ 438 (1035)
+||++||+||+|||+.+|.++.+|++++.++|+|+|+||+|+|+ .+.+.+|+.||+|++|+||||+.+|+.|++.|+++
T Consensus 191 ~ALaaGN~VVlKPs~~tp~t~~~l~~l~~eaGlP~gv~~vv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~~ 270 (504)
T 3ek1_A 191 PALAAGCTMIVRPADLTPLTALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCAPT 270 (504)
T ss_dssp HHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTTEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHGGG
T ss_pred HHHHCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHH
T ss_conf 99973997999899767289999999999848894059999579778999998297768899989889999999962531
Q ss_pred CCCEEECCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCH-HHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 981521289965699968999999999999997413899845785089927507-8799999999752014699999885
Q 001662 439 GKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDASADV 517 (1035)
Q Consensus 439 lkpv~lElGGksp~IV~~dADle~Aa~~Iv~s~f~naGQ~C~a~~~ViV~~~~~-~f~e~Lv~~~~~lkvG~p~d~~~~~ 517 (1035)
++|+++|||||||+||++|||++.|++.+++++|+|+||.|++++++||+++++ +|+++|+++++++++|+|.++++++
T Consensus 271 lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~ 350 (504)
T 3ek1_A 271 IKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKVGNGTEPGVVI 350 (504)
T ss_dssp TCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCCB
T ss_pred CCCEEECCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 67757407987724874899999999999999996399988779889996268899999999998425348976666754
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCEEECEEEECCCCCCCCCCCCCCCCCEEEEECCCHHHHH
Q ss_conf 77769899999999999999879817307754446788999425042883499988221112348612699639999999
Q 001662 518 GPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAI 597 (1035)
Q Consensus 518 Gpli~~~~~eri~~~I~~av~~GAkvl~gG~~~~~~~~~~g~fi~PTIl~~v~~d~~i~~eEiFGPVl~V~~~~d~eEAI 597 (1035)
||++++.+++++.+++++++++|+++++||.. ..|+|++|||+.+++++|++++||+||||++|++|+|+||||
T Consensus 351 Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~------~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi 424 (504)
T 3ek1_A 351 GPMIEEKAITKVKAHIEDAVSKGAKLITGGKE------LGGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEVI 424 (504)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE------EETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHCCCEEEECCCC------CCCCEECCEEEECCCCCCHHHCCCCCCCEEEEEEECCHHHHH
T ss_conf 62459999999999999999779999967866------888467786874489867534264547279999969999999
Q ss_pred HHHHHCCCCCEEEEECCCHHHHHHHHHCCCEEEEEECCCC----CCCCCCCCCCCCCCCCCHHHHHHCCEEEEEEEEC
Q ss_conf 9998159985799983887889998741431599992986----7887898898897867499998402040999944
Q 001662 598 KMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPV----PSSFSSINESGEFNFCGKSGVQFYTQIKTVAQQW 671 (1035)
Q Consensus 598 ~l~N~~~~gLsasIfT~d~~~~~~~a~~l~sG~V~VN~~~----~~PfGG~~~SG~G~~~G~~g~~~ft~~k~v~~~~ 671 (1035)
+++|+++|||++||||+|..+++++++++++|+|+||+.. .+||||+|.||+|+++|.+++++|++.|+|+..+
T Consensus 425 ~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~~t~~K~v~~~~ 502 (504)
T 3ek1_A 425 AQANDTIFGLAAYFYTENFSRAIRVSEALEYGMVGHNTGLISNEVAPFGGVKQSGLGREGSKYGIEEYLETKYICSAY 502 (504)
T ss_dssp HHHHCSSCCSEEEEECCBHHHHHHHHHHSCCSEEEESCSCCCCSSSCBCCSGGGEESCBSTTTSGGGGEEEEEEEEEC
T ss_pred HHHHCCCCCEEEEEECCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCEEEEEEEC
T ss_conf 998579998179998699999999998677175998998777889982785747378777599999852338999955
No 7
>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei}
Probab=1.00 E-value=1 Score=795.30 Aligned_cols=469 Identities=25% Similarity=0.419 Sum_probs=444.2
Q ss_pred CCCCCEEECCEEECCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 87435077297730899974994559999737996389999999999999983076318999999999999999999859
Q 001662 199 NNRVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDI 278 (1035)
Q Consensus 199 ~~~i~~~I~G~~~~~~~~~~~~v~nP~tGe~i~~v~~~s~~di~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~ 278 (1035)
...+++||||+|+.+.++.+++++||+||+++++++.++.+++++++++|++||+.|+.++..+|.++|++++++|+++.
T Consensus 9 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 88 (506)
T 3rh9_A 9 LENLTGYIGGRWKDSAGGATFDVYNPATGSVIAKVPSMPEEDVVAAVEAGQSALRLTNPWPIETRRKWLEDIRDGLKENR 88 (506)
T ss_dssp GSCCSEEETTEEECCCTTCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHCCSSSCCCHHHHHHHHHHHHHHHHHTH
T ss_pred CCCCCEEECCEEEECCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 65567438999852799987997889999889998489999999999999999987631999999999999999999849
Q ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEE-CCCEEEEEECCCCCCHHCHHHH
Q ss_conf 999999999929997999999999888999999998751183114778997512652-1660699877888550204889
Q 001662 279 DKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFR-EPLGVCAGICPFNFPDMTPLWM 357 (1035)
Q Consensus 279 e~La~~l~~etGk~~~ea~~Ev~~a~~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~-ePlGVV~vI~P~N~Pl~~~~~~ 357 (1035)
++|+++++.|+||+..+++.|+..++..+++++..+....+...+.. .+...++++ +|+|||++|+|||||+.+.+++
T Consensus 89 ~ela~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 167 (506)
T 3rh9_A 89 EEIGRILCMEHGKPWKEAQGEVDYAAGFFDYCAKHISALDSHTIPEK-PKDCTWTVHYRPVGVTGLIVPWNFPIGMIAKK 167 (506)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGGCCEECSCC-GGGCEEEEEEEECCSEEEECCSSSTTHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC-CCCEEEEEECCCCEEEEEECCCCHHHHHHHHH
T ss_conf 99999999973999999999999999999999998887238611368-98514676164552899988883378999999
Q ss_pred HHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEECC-HHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHH
Q ss_conf 9999861998999089999237999999999909999857896266-355763412998069999216147899999998
Q 001662 358 FSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGT-NDVINHICDDEDIKAISFVASSTASVQMYARAA 436 (1035)
Q Consensus 358 l~~ALaaGNaVIlKPSe~ap~ta~~L~ell~eAGlP~gvv~vV~g~-~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~~Aa 436 (1035)
+++||++||+||+|||+.+|.++.+|++++.++|+|+|+||+|+|+ .+.+.+|+.|++||+|+||||+.+|+.|+++|+
T Consensus 168 ~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~vG~~i~~~aa 247 (506)
T 3rh9_A 168 LSAALAAGCPSVIKPASETPLTMIAFFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLIVDTA 247 (506)
T ss_dssp HHHHHHHTCCEEEECCTTSCHHHHHHHHHHTTTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTT
T ss_pred HHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHCCCHHHEEEEECCCHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHH
T ss_conf 99999749989998488557999999999998493942489996797689999981989787999797799999999866
Q ss_pred HCCCCEEECCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCH-HHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 23981521289965699968999999999999997413899845785089927507-87999999997520146999998
Q 001662 437 ARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDASA 515 (1035)
Q Consensus 437 ~~lkpv~lElGGksp~IV~~dADle~Aa~~Iv~s~f~naGQ~C~a~~~ViV~~~~~-~f~e~Lv~~~~~lkvG~p~d~~~ 515 (1035)
++++|+++|||||||+||++|||++.|++.+++++|+|+||.|++++++||+++++ +|+++|+++++++++|+|.++++
T Consensus 248 ~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 327 (506)
T 3rh9_A 248 EQVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQKLAERVNKMTVGDGMNDGI 327 (506)
T ss_dssp TTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSSSSCCEEEEETTTHHHHHHHHHHHHHHCCBSCTTSTTC
T ss_pred HCCCCEEEECCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 32786698548889669979999999999999999975899866686789727889999999999998546789766677
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCEEECEEEECCCCCCCCCCCCCCCCCEEEEECCCHHH
Q ss_conf 85777698999999999999998798173077544467889994250428834999882211123486126996399999
Q 001662 516 DVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEE 595 (1035)
Q Consensus 516 ~~Gpli~~~~~eri~~~I~~av~~GAkvl~gG~~~~~~~~~~g~fi~PTIl~~v~~d~~i~~eEiFGPVl~V~~~~d~eE 595 (1035)
++||++++.+++++.+++++++++|+++++||.... ...|+|++|||+.+++++|++++||+||||++|++|+|+||
T Consensus 328 ~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~---~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~de 404 (506)
T 3rh9_A 328 DIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAE---LGDGLFFPPTVVQGVDREMCCYQEETFGPLVPMALFRTEEE 404 (506)
T ss_dssp SBCCCSCHHHHHHHHHHHHHHHHTTCEEEESCCGGG---CCSSSCCCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCC---CCCCCEECCEEECCCCCCCHHHCCCCCCCEEEEEEECCHHH
T ss_conf 635557999999999999999977998996687677---78873777758716899874230534573799999599999
Q ss_pred HHHHHHHCCCCCEEEEECCCHHHHHHHHHCCCEEEEEECCCCC----CCCCCCCCCCCCCCCCHHHHHHCCEEEEEEEEC
Q ss_conf 9999981599857999838878899987414315999929867----887898898897867499998402040999944
Q 001662 596 AIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPVP----SSFSSINESGEFNFCGKSGVQFYTQIKTVAQQW 671 (1035)
Q Consensus 596 AI~l~N~~~~gLsasIfT~d~~~~~~~a~~l~sG~V~VN~~~~----~PfGG~~~SG~G~~~G~~g~~~ft~~k~v~~~~ 671 (1035)
||+++|+++|||++||||+|..++++++.++++|+|+||+... +||||+|.||+|+++|.+|+++|++.|+|+...
T Consensus 405 Ai~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~ft~~K~v~~~~ 484 (506)
T 3rh9_A 405 VIDAGNDTEFGLASYVFTADAERAQRVAAGLRFGHVGWNTGTGPTPEAPFGGMKASGIGREGGLEGLFEFVEAQTVPRGF 484 (506)
T ss_dssp HHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCCSEEEESCCCCCCTTSCBCCSGGGEESCBSHHHHHTTTEEEEEEEEC-
T ss_pred HHHHHHCCCCCCEEEEECCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCEEEEEECC
T ss_conf 99998579998459998489999999998688456998188887889874683767178676088999851548999957
No 8
>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q
Probab=1.00 E-value=1 Score=794.88 Aligned_cols=466 Identities=27% Similarity=0.446 Sum_probs=442.7
Q ss_pred CCCCEEECCEEECCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 74350772977308999749945599997379963899999999999999830763189999999999999999998599
Q 001662 200 NRVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDID 279 (1035)
Q Consensus 200 ~~i~~~I~G~~~~~~~~~~~~v~nP~tGe~i~~v~~~s~~di~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e 279 (1035)
...++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|++++++|+++.+
T Consensus 11 ~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 90 (484)
T 3ifg_A 11 LRHQAYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWAGWRMKTAKERAAILRRWFDLVIANSD 90 (484)
T ss_dssp SCCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred CCCCEEECCEEEECCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 45565689998517999879868889998889985899999999999999989976519989999999999999999999
Q ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCEEEEEECCCCCCHHCHHHHHH
Q ss_conf 99999999929997999999999888999999998751183114778997512652166069987788855020488999
Q 001662 280 KLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFS 359 (1035)
Q Consensus 280 ~La~~l~~etGk~~~ea~~Ev~~a~~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~ePlGVV~vI~P~N~Pl~~~~~~l~ 359 (1035)
+|+++++.|+||+..+++.|+..++..+++++..+....+...+....+...+++++|+|||++|+|||||+.+.+++++
T Consensus 91 ela~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a 170 (484)
T 3ifg_A 91 DLALILTTEQGKPLAEAKGEIAYAASFIEWFAEEGKRVAGDTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARKVG 170 (484)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECSSEEEECCSSSTTHHHHHHHH
T ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCHHHHHHHHHH
T ss_conf 99999998719999999999999999999999878860585246667884137996587579998887575999999999
Q ss_pred HHHHCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEECC-HHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHC
Q ss_conf 99861998999089999237999999999909999857896266-35576341299806999921614789999999823
Q 001662 360 IAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGT-NDVINHICDDEDIKAISFVASSTASVQMYARAAAR 438 (1035)
Q Consensus 360 ~ALaaGNaVIlKPSe~ap~ta~~L~ell~eAGlP~gvv~vV~g~-~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~~Aa~~ 438 (1035)
+||++||+||+|||+.+|.++..|++++.++|+|+|+||+|+|+ .+.+.+|+.|++|++|+||||+.+|+.|++.|+++
T Consensus 171 ~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~p~v~~v~FTGS~~~G~~i~~~aa~~ 250 (484)
T 3ifg_A 171 PALAAGCPIVVKPAESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSAPT 250 (484)
T ss_dssp HHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTGGG
T ss_pred HHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHCC
T ss_conf 99983997999889877089999999999839791309998179779999998297827799979789999999986514
Q ss_pred CCCEEECCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCH-HHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 981521289965699968999999999999997413899845785089927507-8799999999752014699999885
Q 001662 439 GKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDASADV 517 (1035)
Q Consensus 439 lkpv~lElGGksp~IV~~dADle~Aa~~Iv~s~f~naGQ~C~a~~~ViV~~~~~-~f~e~Lv~~~~~lkvG~p~d~~~~~ 517 (1035)
++|+++|||||||+||++|||++.|++.+++++|+|+||.|++++++||+++++ +|+++|+++++++++|+|.++++++
T Consensus 251 ~k~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~ 330 (484)
T 3ifg_A 251 VKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFADKLAAAVSKLKVGRGTESGATL 330 (484)
T ss_dssp TCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCB
T ss_pred CCCEEEECCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 77548864888758997999999999999999985189933079768974878999999999999846678988887877
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCEEECEEEECCCCCCCCCCCCCCCCCEEEEECCCHHHHH
Q ss_conf 77769899999999999999879817307754446788999425042883499988221112348612699639999999
Q 001662 518 GPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAI 597 (1035)
Q Consensus 518 Gpli~~~~~eri~~~I~~av~~GAkvl~gG~~~~~~~~~~g~fi~PTIl~~v~~d~~i~~eEiFGPVl~V~~~~d~eEAI 597 (1035)
||++++.+++++.+++++++++|+++++||... ...|+|++|||+.+++++|++++||+||||++|++|+|+||||
T Consensus 331 Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~----~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi 406 (484)
T 3ifg_A 331 GPLINEAAVKKVESHIADALAKGASLMTGGKRH----ALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELV 406 (484)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBC----TTCTTCBCCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCC----CCCCCEECCEEEECCCCCCHHHCCEEECCEEEEEEECCHHHHH
T ss_conf 788399999999999999997799999789746----8998567678872589877533775468679999969999999
Q ss_pred HHHHHCCCCCEEEEECCCHHHHHHHHHCCCEEEEEECCCC----CCCCCCCCCCCCCCCCCHHHHHHCCEEEEEEE
Q ss_conf 9998159985799983887889998741431599992986----78878988988978674999984020409999
Q 001662 598 KMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPV----PSSFSSINESGEFNFCGKSGVQFYTQIKTVAQ 669 (1035)
Q Consensus 598 ~l~N~~~~gLsasIfT~d~~~~~~~a~~l~sG~V~VN~~~----~~PfGG~~~SG~G~~~G~~g~~~ft~~k~v~~ 669 (1035)
+++|+++|||+++|||+|..++++++.++++|+|+||+.. .+||||+|.||+|+++|.+++++|++.|+|++
T Consensus 407 ~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~PfGG~k~SG~Gr~~g~~gl~~~~~~k~v~~ 482 (484)
T 3ifg_A 407 RLANDTEFGLAAYLYSRDIGRVWRVAEALEYGMVGINTGLISNEVAPFGGVKQSGLGREGSHYGIDDYVVIKYLCV 482 (484)
T ss_dssp HHHHCSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCSSSCBCCEETTEECCBSTTTTTGGGEEEEEEEE
T ss_pred HHHHCCCCCCEEEEECCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCEEEEEE
T ss_conf 9996799983699988899999999986886669986997778888728827675787762999998514479999
No 9
>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A*
Probab=1.00 E-value=1 Score=792.30 Aligned_cols=471 Identities=28% Similarity=0.410 Sum_probs=442.2
Q ss_pred CCCCCEEECCEEECCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH-----HHHCCCHHHHHHHHHHHHHH
Q ss_conf 8743507729773089997499455999973799638999999999999998307-----63189999999999999999
Q 001662 199 NNRVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFP-----AWKNTPVATRQRIMFKLQEL 273 (1035)
Q Consensus 199 ~~~i~~~I~G~~~~~~~~~~~~v~nP~tGe~i~~v~~~s~~di~~av~~Ar~A~~-----~W~~~s~~~R~~iL~~la~~ 273 (1035)
....++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||. .|+.++..+|.++|++++++
T Consensus 5 ~~~~~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~~~w~~~~~~~R~~~L~~~a~~ 84 (503)
T 3iwj_A 5 IPTRQLFINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNKGADWATASGAVRARYLRAIAAK 84 (503)
T ss_dssp CCCCCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHGGGGTTTTSSCHHHHHHHHHHHHHH
T ss_pred CCCCCEEECCEEECCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHH
T ss_conf 88876538999864899986885788998989998689999999999999997565577631129999999999999999
Q ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-C--CCCCCCCCEEEECCCEEEEEECCCCCC
Q ss_conf 9985999999999992999799999999988899999999875118311-4--778997512652166069987788855
Q 001662 274 IRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFV-P--NALCGLDTYCFREPLGVCAGICPFNFP 350 (1035)
Q Consensus 274 L~~~~e~La~~l~~etGk~~~ea~~Ev~~a~~~l~~~~~~~~~~~~~~~-~--~~~~g~~~~~~~ePlGVV~vI~P~N~P 350 (1035)
|+++.++|+++++.|+||+..+++.|+..++..+++++..+....+... + ....+...+++++|+|||++|+|||||
T Consensus 85 l~~~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P 164 (503)
T 3iwj_A 85 VTEKKPELAKLESIDCGKPLDEAAWDIDDVAGCFEYYADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNYP 164 (503)
T ss_dssp HHHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTEEECCSCTTEEEEEEEEECCEEEEECCSSSH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCEEEEECCCCHH
T ss_conf 99879999999998759999999999999999999999999873177335666667785422797577469998777669
Q ss_pred HHCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCH-HHHHHHHCCCCCCEEEEECCCHHHH
Q ss_conf 020488999998619989990899992379999999999099998578962663-5576341299806999921614789
Q 001662 351 DMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGTN-DVINHICDDEDIKAISFVASSTASV 429 (1035)
Q Consensus 351 l~~~~~~l~~ALaaGNaVIlKPSe~ap~ta~~L~ell~eAGlP~gvv~vV~g~~-e~~~~L~~h~~vd~V~fTGS~~vG~ 429 (1035)
+.+.++++++||++||+||+|||+.+|.++.++++++.++|+|+|+||+|+|+. +.+.+|+.|+++|+|+||||+.+|+
T Consensus 165 ~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~ 244 (503)
T 3iwj_A 165 MLMATWKVAPALAAGCAAILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATGS 244 (503)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCHHHHTHHHHTCTTCCEEEEESCHHHHH
T ss_pred HHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHCCCCCEEEEECCHHHHH
T ss_conf 99999999999865995999879854699999999999858593759999689578999986188826799879689999
Q ss_pred HHHHHHHHCCCCEEECCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCH-HHHHHHHHHHHHCCCC
Q ss_conf 999999823981521289965699968999999999999997413899845785089927507-8799999999752014
Q 001662 430 QMYARAAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVN 508 (1035)
Q Consensus 430 ~I~~~Aa~~lkpv~lElGGksp~IV~~dADle~Aa~~Iv~s~f~naGQ~C~a~~~ViV~~~~~-~f~e~Lv~~~~~lkvG 508 (1035)
.|+++|+++++|+++|||||||+||++|||++.|++.+++++|+|+||.|++++++||+++++ +|+++|+++++++++|
T Consensus 245 ~i~~~aa~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g 324 (503)
T 3iwj_A 245 KIMTAAAQLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESIATEFLNRIVKWIKNIKIS 324 (503)
T ss_dssp HHHHHHGGGTCCEEEECCCCEEEEECSSSCHHHHHHHHHHHHTGGGGCCTTCEEEEEEETTTHHHHHHHHHHHHHTCCBS
T ss_pred HHHHHHHCCCCCEEEECCCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHCCCC
T ss_conf 99999765798889977887866982899999999999999981699972069866884889999999999999963578
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCEEECEEEECCCCCCCCCCCCCCCCCEEEE
Q ss_conf 69999988577769899999999999999879817307754446788999425042883499988221112348612699
Q 001662 509 VGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNM 588 (1035)
Q Consensus 509 ~p~d~~~~~Gpli~~~~~eri~~~I~~av~~GAkvl~gG~~~~~~~~~~g~fi~PTIl~~v~~d~~i~~eEiFGPVl~V~ 588 (1035)
+|.++++++||++++.+++++.+++++++++|+++++||.... ....|+|++|||+.+++++|++++||+||||++|+
T Consensus 325 ~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~--~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~ 402 (503)
T 3iwj_A 325 DPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPE--HLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVK 402 (503)
T ss_dssp CTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCT--TCCSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEE
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCC--CCCCCCEECCEEEECCCCCCHHHCCEEECCEEEEE
T ss_conf 9877888656765999999999999999977999982687776--67887510875650699976421860058369999
Q ss_pred ECCCHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHCCCEEEEEECCCC----CCCCCCCCCCCCCCCCCHHHHHHCCEE
Q ss_conf 6399999999998159985799983887889998741431599992986----788789889889786749999840204
Q 001662 589 QADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPV----PSSFSSINESGEFNFCGKSGVQFYTQI 664 (1035)
Q Consensus 589 ~~~d~eEAI~l~N~~~~gLsasIfT~d~~~~~~~a~~l~sG~V~VN~~~----~~PfGG~~~SG~G~~~G~~g~~~ft~~ 664 (1035)
+|+++||||+++|+++|||++||||+|..++++++.++++|+|+||+.. .+||||+|.||+|+++|.+|+++|++.
T Consensus 403 ~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~g~~~f~~~ 482 (503)
T 3iwj_A 403 TFSTEEEAIDLANDTVYGLGAAVISNDLERCERVTKAFKAGIVWVNCSQPCFTQAPWGGVKRSGFGRELGEWGLDNYLSV 482 (503)
T ss_dssp EESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSSCCCCTTSCBCCSGGGEECCBSHHHHHHTTEEE
T ss_pred EECCHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCE
T ss_conf 81999999999867998857999899999999999868824699859988888998088675657875469999996076
Q ss_pred EEEEEEC
Q ss_conf 0999944
Q 001662 665 KTVAQQW 671 (1035)
Q Consensus 665 k~v~~~~ 671 (1035)
|+|+..+
T Consensus 483 k~v~~~~ 489 (503)
T 3iwj_A 483 KQVTQYI 489 (503)
T ss_dssp EEEEEEC
T ss_pred EEEEEEC
T ss_conf 8999947
No 10
>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti}
Probab=1.00 E-value=1 Score=791.40 Aligned_cols=469 Identities=29% Similarity=0.425 Sum_probs=444.3
Q ss_pred CCCCEEECCEEECCCCCCEEEEECCCC-CCEEEEECCCCHHHHHHHHHHHHHHH--HHHHCCCHHHHHHHHHHHHHHHHH
Q ss_conf 743507729773089997499455999-97379963899999999999999830--763189999999999999999998
Q 001662 200 NRVSNFIGGKFVDLRGSATIDVINPAT-QEVGSQVPLTTYEEFKDAVDAAKRAF--PAWKNTPVATRQRIMFKLQELIRR 276 (1035)
Q Consensus 200 ~~i~~~I~G~~~~~~~~~~~~v~nP~t-Ge~i~~v~~~s~~di~~av~~Ar~A~--~~W~~~s~~~R~~iL~~la~~L~~ 276 (1035)
..+++||||+|+.+.++.+++++||+| |+++++++.++.+++++++++|++|| ..|+.++.++|.++|++++++|++
T Consensus 21 ~~~~~~I~G~~~~~~~~~~~~v~nP~t~g~~i~~~~~~~~~dv~~av~aA~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~ 100 (528)
T 3u4j_A 21 SRYQMLVDGKSVDAASGSTIDRVSPGHAGEVVGTWPEASADDVRKAVAAARKAFDAGPWPRMSGAERSRLMFKVADLILA 100 (528)
T ss_dssp CBCCEEETTEEECCTTCCEEEEECTTSTTCEEEEEECCCHHHHHHHHHHHHHHHHTSSGGGSCHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEECCEEECCCCCCEEEEECCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 34565589998528999879974879989377998089999999999999986545641229999999999999999998
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCEEEEEECCCCCCHHCHHH
Q ss_conf 59999999999929997999999999888999999998751183114778997512652166069987788855020488
Q 001662 277 DIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLW 356 (1035)
Q Consensus 277 ~~e~La~~l~~etGk~~~ea~~Ev~~a~~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~ePlGVV~vI~P~N~Pl~~~~~ 356 (1035)
+.++|+++++.|+||+..+++.|+..++..++++++.+....+...+....+...+++++|+|||++|+|||||+.+.++
T Consensus 101 ~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~ 180 (528)
T 3u4j_A 101 RQEELALIESLEVGKPIAQARGEIGFCADLWSYAAGQARALEGQTHNNIGDDRLGLVLREPVGVVGIITPWNFPFIIASE 180 (528)
T ss_dssp THHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCSCTTEEEEEEEEECCEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCEEEEEECCCEEEEEECCCCCHHHHHHH
T ss_conf 79999999999859999999999999999999999978872683403578884258996364189998898657899999
Q ss_pred HHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEEC-CHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHH
Q ss_conf 9999986199899908999923799999999990999985789626-635576341299806999921614789999999
Q 001662 357 MFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHG-TNDVINHICDDEDIKAISFVASSTASVQMYARA 435 (1035)
Q Consensus 357 ~l~~ALaaGNaVIlKPSe~ap~ta~~L~ell~eAGlP~gvv~vV~g-~~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~~A 435 (1035)
++++||++||+||+|||+.+|.++.+|++++.++|+|+|+||+|+| +.+.+.+|+.|++||+|+||||+.+|+.|+++|
T Consensus 181 ~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~a 260 (528)
T 3u4j_A 181 RVPWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVGTKLGEIA 260 (528)
T ss_dssp HHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCSSTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHH
T ss_conf 99999985996999848863799999999999858997839999578478999998398968899869799999999998
Q ss_pred HHCCCCEEECCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCH-HHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 823981521289965699968999999999999997413899845785089927507-8799999999752014699999
Q 001662 436 AARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDAS 514 (1035)
Q Consensus 436 a~~lkpv~lElGGksp~IV~~dADle~Aa~~Iv~s~f~naGQ~C~a~~~ViV~~~~~-~f~e~Lv~~~~~lkvG~p~d~~ 514 (1035)
+++++|+++|||||||+||++|||++.|++.+++++|+|+||.|++++++||+++++ +|+++|+++++++++|+|.+++
T Consensus 261 a~~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 340 (528)
T 3u4j_A 261 ARTVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDALMERLLDISRKVAFGDPLNER 340 (528)
T ss_dssp HTTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHCCEECTTSTT
T ss_pred HHCCCCEEEECCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 70599558853898826989999999999999999962699988678789984168899999999999960578987767
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCEEECEEEECCCCCCCCCCCCCCCCCEEEEECCCHH
Q ss_conf 88577769899999999999999879817307754446788999425042883499988221112348612699639999
Q 001662 515 ADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLE 594 (1035)
Q Consensus 515 ~~~Gpli~~~~~eri~~~I~~av~~GAkvl~gG~~~~~~~~~~g~fi~PTIl~~v~~d~~i~~eEiFGPVl~V~~~~d~e 594 (1035)
+++||++++.+++++.+++++++++|+++++||.... ...|+|++|||+.+++++|++++||+||||++|++|+|+|
T Consensus 341 ~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~---~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~d 417 (528)
T 3u4j_A 341 TKIGAMISEAHAEKVHSYVTAGITSGAELLLGGERIG---REAGLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFKTAD 417 (528)
T ss_dssp CSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSEEC---TTTSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESSHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCC---CCCCCEECCEEEECCCCCCCCCCCEEECCEEEEEEECCHH
T ss_conf 8557760999999999999999977999994787677---7887575664773489998121660146279999969999
Q ss_pred HHHHHHHHCCCCCEEEEECCCHHHHHHHHHCCCEEEEEECCCCC----CCCCCCCCCCCCCCCCHHHHHHCCEEEEEEEE
Q ss_conf 99999981599857999838878899987414315999929867----88789889889786749999840204099994
Q 001662 595 EAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPVP----SSFSSINESGEFNFCGKSGVQFYTQIKTVAQQ 670 (1035)
Q Consensus 595 EAI~l~N~~~~gLsasIfT~d~~~~~~~a~~l~sG~V~VN~~~~----~PfGG~~~SG~G~~~G~~g~~~ft~~k~v~~~ 670 (1035)
|||+++|+++|||+++|||+|.+++++++.++++|+|+||+... +||||+|.||+|+++|.+|++.|++.|+|+..
T Consensus 418 eAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~ 497 (528)
T 3u4j_A 418 EAVALANATEFGLSASVWSTNLETALQTIRRIRAGRCWINSVIDGTPELPIGGYKKSGLGRELGRYGFDEYSQFKGVHVT 497 (528)
T ss_dssp HHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCCCTTSCBCCSGGGEESCBSTTHHHHHTEEEEEEEEE
T ss_pred HHHHHHHCCCCCCEEEEECCCHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCEEEEEEE
T ss_conf 99999856998847999868999999999868730799899888888887178276777857659999986054899990
Q ss_pred C
Q ss_conf 4
Q 001662 671 W 671 (1035)
Q Consensus 671 ~ 671 (1035)
+
T Consensus 498 ~ 498 (528)
T 3u4j_A 498 L 498 (528)
T ss_dssp S
T ss_pred C
T ss_conf 7
Done!