Citrus Sinensis ID: 001665
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1035 | 2.2.26 [Sep-21-2011] | |||||||
| Q0WM29 | 607 | Methylmalonate-semialdehy | yes | no | 0.470 | 0.802 | 0.672 | 0.0 | |
| P52713 | 523 | Probable methylmalonate-s | yes | no | 0.456 | 0.902 | 0.540 | 1e-149 | |
| Q02252 | 535 | Methylmalonate-semialdehy | yes | no | 0.456 | 0.882 | 0.517 | 1e-148 | |
| Q02253 | 535 | Methylmalonate-semialdehy | yes | no | 0.476 | 0.921 | 0.504 | 1e-148 | |
| Q9EQ20 | 535 | Methylmalonate-semialdehy | yes | no | 0.476 | 0.921 | 0.5 | 1e-147 | |
| Q07536 | 537 | Methylmalonate-semialdehy | yes | no | 0.476 | 0.918 | 0.498 | 1e-147 | |
| Q17M80 | 521 | Probable methylmalonate-s | N/A | no | 0.453 | 0.900 | 0.539 | 1e-144 | |
| Q54I10 | 528 | Probable methylmalonate-s | yes | no | 0.453 | 0.888 | 0.528 | 1e-144 | |
| Q7KW39 | 520 | Probable methylmalonate-s | yes | no | 0.451 | 0.898 | 0.535 | 1e-140 | |
| Q7QC84 | 521 | Probable methylmalonate-s | yes | no | 0.453 | 0.900 | 0.512 | 1e-139 |
| >sp|Q0WM29|MMSA_ARATH Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Arabidopsis thaliana GN=ALDH6B2 PE=2 SV=2 | Back alignment and function desciption |
|---|
Score = 679 bits (1753), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/495 (67%), Positives = 403/495 (81%), Gaps = 8/495 (1%)
Query: 201 RVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPV 260
RV N IGG FV+ + S+ IDVINPATQEV S+VPLTT EEFK AV AAK+AFP W+NTP+
Sbjct: 113 RVPNLIGGSFVESQSSSFIDVINPATQEVVSKVPLTTNEEFKAAVSAAKQAFPLWRNTPI 172
Query: 261 ATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGE 320
TRQR+M K QELIR+++DKLAMNIT EQG TLK + D+ GLEVVE AC +ATLQ+GE
Sbjct: 173 TTRQRVMLKFQELIRKNMDKLAMNITTEQGKTLKDSHGDIFRGLEVVEHACGMATLQMGE 232
Query: 321 FVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTS 380
++PN G+DTY REPLGVCAGICPFNFP M PLWMF +AVTCGNTFILKPSEK+PG S
Sbjct: 233 YLPNVSNGVDTYSIREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFILKPSEKDPGAS 292
Query: 381 MILAALAMEAGLPDGVLNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAARGK 440
+ILA LAMEAGLPDGVLNIVHGTND +N ICDDEDI+A+SFV S+TA + +YARAAA+GK
Sbjct: 293 VILAELAMEAGLPDGVLNIVHGTNDTVNAICDDEDIRAVSFVGSNTAGMHIYARAAAKGK 352
Query: 441 RVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWEDELVE 500
R+QSN G KN+ +++PDA+IDATLNAL++AGFGAAG+RC ALST VFVG + WED+LVE
Sbjct: 353 RIQSNMGAKNHGLVLPDANIDATLNALLAAGFGAAGQRCMALSTVVFVGDAKSWEDKLVE 412
Query: 501 LAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNF 560
AKALKV G++ AD+GPV+S + K++I RLIQ+ VD+GA LLLDGR+IVVPGYE GNF
Sbjct: 413 RAKALKVTCGSEPDADLGPVISKQAKERICRLIQSGVDDGAKLLLDGRDIVVPGYEKGNF 472
Query: 561 VGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAAR 620
+GPTIL VT +MECYKEEIFGPVL+ MQA+S +EAI ++N+N++ NGA+IFTSSG AAR
Sbjct: 473 IGPTILSGVTPDMECYKEEIFGPVLVCMQANSFDEAISIINKNKYGNGAAIFTSSGAAAR 532
Query: 621 KFQNEIEARLVGINVPVPS-----SFSSINES--GEFNFCGKSGVQFYTQIKTVAQQWND 673
KFQ +IEA +GINVP+P SF+ S G+ NF GK+GV F+TQIKTV QQW D
Sbjct: 533 KFQMDIEAGQIGINVPIPVPLPFFSFTGNKASFAGDLNFYGKAGVDFFTQIKTVTQQWKD 592
Query: 674 LPKLGMPLTMPLSSE 688
+P + L MP S +
Sbjct: 593 IPT-SVSLAMPTSQK 606
|
Arabidopsis thaliana (taxid: 3702) EC: 1EC: .EC: 2EC: .EC: 1EC: .EC: 2EC: 7 |
| >sp|P52713|MMSA_CAEEL Probable methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Caenorhabditis elegans GN=alh-8 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 528 bits (1360), Expect = e-149, Method: Compositional matrix adjust.
Identities = 259/479 (54%), Positives = 337/479 (70%), Gaps = 7/479 (1%)
Query: 202 VSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVA 261
V +I G+ V+ + + +++ NPAT EV + VP T E + AVD+AK AF WKNT
Sbjct: 30 VKLWIDGQAVESKTTDFVELTNPATNEVIAMVPNATQAEMQAAVDSAKNAFNTWKNTSPL 89
Query: 262 TRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEF 321
TRQ+ MFKLQ LI+RD+ KLA +IT+EQG TL A+ DV GL+VVE AC+V +L +GE
Sbjct: 90 TRQQCMFKLQALIKRDMKKLAESITIEQGKTLPDAEGDVSRGLQVVEHACSVPSLMMGET 149
Query: 322 VPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSM 381
+PN +DT+ +R PLGV AGICPFNFP M PLWMF +A+ GNT ++KPSE++PG +
Sbjct: 150 LPNVSRDMDTHSYRIPLGVTAGICPFNFPAMIPLWMFPVALATGNTMVIKPSEQDPGAAQ 209
Query: 382 ILAALAMEAGLPDGVLNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAARGKR 441
+L LA EAG+PDG +NI+HG + +N ICD+ DIKAISFV A +Y R A GKR
Sbjct: 210 LLVELAKEAGVPDGCVNIIHGQHSAVNFICDNPDIKAISFVGGDAAGKHIYERGAKNGKR 269
Query: 442 VQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWEDELVEL 501
VQSN G KN+ +IM DA+ + TLN L +A FGAAG+RC AL+TAV VG + W ELVE
Sbjct: 270 VQSNMGAKNHGVIMADANKEQTLNQLTAAAFGAAGQRCMALTTAVLVGEARAWLPELVEK 329
Query: 502 AKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFV 561
AK LKVN G D+GP++S + K ++ RLI++A GA + LDG NI VPG+ENGNFV
Sbjct: 330 AKNLKVNAGWKPDTDIGPLISKQSKARVLRLIESAKKEGAQVPLDGSNITVPGFENGNFV 389
Query: 562 GPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARK 621
GPTIL V NM CY+EEIFGPVL+ M+A++L EAI+++N N + NG +IFTS+G ARK
Sbjct: 390 GPTILAGVKPNMTCYREEIFGPVLVVMEAENLNEAIEIINNNPYGNGTAIFTSNGATARK 449
Query: 622 FQNEIEARLVGINVPVPS-----SFSSINES--GEFNFCGKSGVQFYTQIKTVAQQWND 673
F NE++ +GINVP+P SF+ S G+ NF GK+G+QFYTQ KTV Q WN+
Sbjct: 450 FTNEVDVGQIGINVPIPVPLPMFSFTGSRGSFLGDLNFYGKAGIQFYTQWKTVTQYWNE 508
|
Plays a role in valine and pyrimidine metabolism. Binds fatty acyl-CoA. Caenorhabditis elegans (taxid: 6239) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 7 |
| >sp|Q02252|MMSA_HUMAN Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Homo sapiens GN=ALDH6A1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 526 bits (1355), Expect = e-148, Method: Compositional matrix adjust.
Identities = 248/479 (51%), Positives = 339/479 (70%), Gaps = 7/479 (1%)
Query: 202 VSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVA 261
V FIGGKFV+ + ID+ NPAT EV +VP T E A+ + KRAFPAW +T V
Sbjct: 40 VKLFIGGKFVESKSDKWIDIHNPATNEVIGRVPQATKAEMDAAIASCKRAFPAWADTSVL 99
Query: 262 TRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEF 321
+RQ+++ + Q+LI+ ++ ++A IT+EQG TL A+ DV GL+VVE AC+V +L +GE
Sbjct: 100 SRQQVLLRYQQLIKENLKEIAKLITLEQGKTLADAEGDVFRGLQVVEHACSVTSLMMGET 159
Query: 322 VPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSM 381
+P+ +D Y +R PLGVCAGI PFNFP M PLWMF +A+ CGNTF++KPSE+ PG +M
Sbjct: 160 MPSITKDMDLYSYRLPLGVCAGIAPFNFPAMIPLWMFPMAMVCGNTFLMKPSERVPGATM 219
Query: 382 ILAALAMEAGLPDGVLNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAARGKR 441
+LA L ++G PDG LNI+HG ++ +N ICD DIKAISFV S+ A ++ R + GKR
Sbjct: 220 LLAKLLQDSGAPDGTLNIIHGQHEAVNFICDHPDIKAISFVGSNKAGEYIFERGSRHGKR 279
Query: 442 VQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWEDELVEL 501
VQ+N G KN+ ++MPDA+ + TLN LV A FGAAG+RC ALSTAV VG + +W ELVE
Sbjct: 280 VQANMGAKNHGVVMPDANKENTLNQLVGAAFGAAGQRCMALSTAVLVGEAKKWLPELVEH 339
Query: 502 AKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFV 561
AK L+VN G AD+GP+++ + K+++ LI + GAS+LLDGR I V GYENGNFV
Sbjct: 340 AKNLRVNAGDQPGADLGPLITPQAKERVCNLIDSGTKEGASILLDGRKIKVKGYENGNFV 399
Query: 562 GPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARK 621
GPTI+ +V NM CYKEEIFGPVL+ ++ ++L+EAI++VN N + NG +IFT++G ARK
Sbjct: 400 GPTIISNVKPNMTCYKEEIFGPVLVVLETETLDEAIQIVNNNPYGNGTAIFTTNGATARK 459
Query: 622 FQNEIEARLVGINVPVPS-----SFSSINES--GEFNFCGKSGVQFYTQIKTVAQQWND 673
+ + ++ VG+NVP+P SF+ S G+ NF GK G+QFYTQ+KT+ QW +
Sbjct: 460 YAHLVDVGQVGVNVPIPVPLPMFSFTGSRSSFRGDTNFYGKQGIQFYTQLKTITSQWKE 518
|
Plays a role in valine and pyrimidine metabolism. Binds fatty acyl-CoA. Homo sapiens (taxid: 9606) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 7 |
| >sp|Q02253|MMSA_RAT Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus GN=Aldh6a1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 526 bits (1354), Expect = e-148, Method: Compositional matrix adjust.
Identities = 252/500 (50%), Positives = 349/500 (69%), Gaps = 7/500 (1%)
Query: 181 STPVNTSASPSGVSPNIDNNRVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEE 240
S+ VN++ P+ + V FI GKFV+ + ID+ NPAT EV +VP +T E
Sbjct: 19 SSKVNSTWYPASSFSSSSVPTVKLFIDGKFVESKSDKWIDIHNPATNEVVGRVPQSTKAE 78
Query: 241 FKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDV 300
+ AV A KRAFPAW +T + +RQ+++ + Q+LI+ ++ ++A IT+EQG TL A+ DV
Sbjct: 79 MEAAVAACKRAFPAWADTSILSRQQVLLRYQQLIKENLKEIARLITLEQGKTLADAEGDV 138
Query: 301 LFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSI 360
GL+VVE AC+V +L +GE +P+ +D Y +R PLGVCAGI PFNFP M PLWMF +
Sbjct: 139 FRGLQVVEHACSVTSLMLGETMPSITKDMDLYSYRLPLGVCAGIAPFNFPAMIPLWMFPM 198
Query: 361 AVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGTNDVINHICDDEDIKAIS 420
A+ CGNTF++KPSE+ PG +M+LA L ++G PDG LNI+HG ++ +N ICD DIKAIS
Sbjct: 199 AMVCGNTFLMKPSERVPGATMLLAKLLQDSGAPDGTLNIIHGQHEAVNFICDHPDIKAIS 258
Query: 421 FVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCT 480
FV S+ A ++ R + GKRVQ+N G KN+ ++MPDA+ + TLN LV A FGAAG+RC
Sbjct: 259 FVGSNQAGEYIFERGSRNGKRVQANMGAKNHGVVMPDANKENTLNQLVGAAFGAAGQRCM 318
Query: 481 ALSTAVFVGSSVQWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNG 540
ALSTAV VG + +W ELVE AK L+VN G AD+GP+++ + K+++ LI + G
Sbjct: 319 ALSTAVLVGEAKKWLPELVERAKNLRVNAGDQPGADLGPLITPQAKERVCNLIDSGAKEG 378
Query: 541 ASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMV 600
AS+LLDGR I V GYENGNFVGPTI+ +V +M CYKEEIFGPVL+ ++ ++L+EAIK+V
Sbjct: 379 ASILLDGRKIKVKGYENGNFVGPTIISNVKPSMTCYKEEIFGPVLVVLETETLDEAIKIV 438
Query: 601 NRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPVPS-----SFSSINES--GEFNFC 653
N N + NG +IFT++G ARK+ + ++ VG+NVP+P SF+ S G+ NF
Sbjct: 439 NDNPYGNGTAIFTTNGAIARKYAHMVDVGQVGVNVPIPVPLPMFSFTGSRSSFRGDTNFY 498
Query: 654 GKSGVQFYTQIKTVAQQWND 673
GK G+QFYTQ+KT+ QW +
Sbjct: 499 GKQGIQFYTQLKTITSQWKE 518
|
Plays a role in valine and pyrimidine metabolism. Binds fatty acyl-CoA. Rattus norvegicus (taxid: 10116) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 7 |
| >sp|Q9EQ20|MMSA_MOUSE Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Mus musculus GN=Aldh6a1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 525 bits (1351), Expect = e-147, Method: Compositional matrix adjust.
Identities = 250/500 (50%), Positives = 348/500 (69%), Gaps = 7/500 (1%)
Query: 181 STPVNTSASPSGVSPNIDNNRVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEE 240
S+ VN + P+ + V FI GKFV+ + ID+ NPAT EV +VP +T E
Sbjct: 19 SSKVNATWYPASSFSSSSVPTVKLFIDGKFVESKSDKWIDIHNPATNEVVGRVPQSTKAE 78
Query: 241 FKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDV 300
AV++ KRAFPAW +T + +RQ+++ + Q+LI+ ++ ++A IT+EQG TL A+ DV
Sbjct: 79 MDAAVESCKRAFPAWADTSILSRQQVLLRYQQLIKENLKEIARLITLEQGKTLADAEGDV 138
Query: 301 LFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSI 360
GL+VVE AC+V +L +GE +P+ +D Y +R PLGVCAGI PFNFP M PLWMF +
Sbjct: 139 FRGLQVVEHACSVTSLMLGETMPSITKDMDLYSYRLPLGVCAGIAPFNFPAMIPLWMFPM 198
Query: 361 AVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGTNDVINHICDDEDIKAIS 420
A+ CGNTF++KPSE+ PG +M+LA L ++G PDG LNI+HG +D +N ICD DIKAIS
Sbjct: 199 AMVCGNTFLMKPSERVPGATMLLAKLLQDSGAPDGTLNIIHGQHDAVNFICDHPDIKAIS 258
Query: 421 FVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCT 480
FV S+ A ++ R + GKRVQ+N G KN+ ++MPDA+ + TLN LV A FGAAG+RC
Sbjct: 259 FVGSNQAGEYIFERGSRNGKRVQANMGAKNHGVVMPDANKENTLNQLVGAAFGAAGQRCM 318
Query: 481 ALSTAVFVGSSVQWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNG 540
ALSTA+ VG + +W ELV+ AK L+VN G AD+GP+++ + K+++ LI + G
Sbjct: 319 ALSTAILVGEAKKWLPELVDRAKNLRVNAGDQPGADLGPLITPQAKERVCNLIDSGTKEG 378
Query: 541 ASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMV 600
AS+LLDGR I V GYENGNFVGPTI+ +V +M CYKEEIFGPVL+ ++ ++L+EAIK+V
Sbjct: 379 ASILLDGRRIKVKGYENGNFVGPTIISNVKPSMTCYKEEIFGPVLVVLETETLDEAIKIV 438
Query: 601 NRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPVPS-----SFSSINES--GEFNFC 653
N N + NG +IFT++G ARK+ + ++ VG+NVP+P SF+ S G+ NF
Sbjct: 439 NDNPYGNGTAIFTTNGATARKYAHMVDVGQVGVNVPIPVPLPMFSFTGSRSSFRGDTNFY 498
Query: 654 GKSGVQFYTQIKTVAQQWND 673
GK G+QFYTQ+KT+ QW +
Sbjct: 499 GKQGIQFYTQLKTITSQWKE 518
|
Plays a role in valine and pyrimidine metabolism. Binds fatty acyl-CoA. Mus musculus (taxid: 10090) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 7 |
| >sp|Q07536|MMSA_BOVIN Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Bos taurus GN=ALDH6A1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 524 bits (1349), Expect = e-147, Method: Compositional matrix adjust.
Identities = 249/500 (49%), Positives = 347/500 (69%), Gaps = 7/500 (1%)
Query: 181 STPVNTSASPSGVSPNIDNNRVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEE 240
S+ VN+S P+ + V FI GKF++ + ID+ NPAT EV +VP +T E
Sbjct: 21 SSKVNSSWQPASSFSSSSVPTVKLFIDGKFIESKSDKWIDIHNPATNEVIGRVPESTKAE 80
Query: 241 FKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDV 300
AV + KR FPAW +T + +RQ+++ + Q+LI+ ++ ++A I +EQG TL A+ DV
Sbjct: 81 MDAAVSSCKRTFPAWADTSILSRQQVLLRYQQLIKENLKEIARLIMLEQGKTLADAEGDV 140
Query: 301 LFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSI 360
GL+VVE AC+V +L +G+ +P+ +D Y +R PLGVCAGI PFNFP M PLWMF +
Sbjct: 141 FRGLQVVEHACSVTSLMLGDTMPSITKDMDLYSYRLPLGVCAGIAPFNFPAMIPLWMFPM 200
Query: 361 AVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGTNDVINHICDDEDIKAIS 420
A+ CGNTF++KPSE+ PG +M+LA L ++G PDG LNI+HG ++ +N ICD DIKAIS
Sbjct: 201 AMVCGNTFLMKPSERVPGATMLLAKLFQDSGAPDGTLNIIHGQHEAVNFICDHPDIKAIS 260
Query: 421 FVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCT 480
FV S+ A ++ R + GKRVQ+N G KN+ ++MPDA+ + TLN LV A FGAAG+RC
Sbjct: 261 FVGSNQAGEYIFERGSRHGKRVQANMGAKNHGVVMPDANKENTLNQLVGAAFGAAGQRCM 320
Query: 481 ALSTAVFVGSSVQWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNG 540
ALSTA+ VG + +W ELVE AK L+VN G AD+GP+++ + K+++ LI + G
Sbjct: 321 ALSTAILVGEAKKWLPELVERAKKLRVNAGDQPGADLGPLITPQAKERVCNLIDSGTKEG 380
Query: 541 ASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMV 600
AS+LLDGR+I V GYENGNFVGPTI+ +V NM CYKEEIFGPVL+ ++ D+L+EAIK+V
Sbjct: 381 ASILLDGRSIKVKGYENGNFVGPTIISNVKPNMTCYKEEIFGPVLVVLETDTLDEAIKIV 440
Query: 601 NRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPVPS-----SFSSINES--GEFNFC 653
N N + NG +IFT++G ARK+ + ++ VG+NVP+P SF+ S G+ NF
Sbjct: 441 NDNPYGNGTAIFTTNGATARKYSHLVDVGQVGVNVPIPVPLPMFSFTGSRASFRGDTNFY 500
Query: 654 GKSGVQFYTQIKTVAQQWND 673
GK G+QFYTQ+KT+ QW +
Sbjct: 501 GKQGIQFYTQLKTITSQWKE 520
|
Plays a role in valine and pyrimidine metabolism. Binds fatty acyl-CoA. Bos taurus (taxid: 9913) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 7 |
| >sp|Q17M80|MMSA_AEDAE Probable methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Aedes aegypti GN=AAEL001134 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 514 bits (1324), Expect = e-144, Method: Compositional matrix adjust.
Identities = 257/476 (53%), Positives = 337/476 (70%), Gaps = 7/476 (1%)
Query: 205 FIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQ 264
FI GKFVD + + ID+ +PAT +V ++VP T +E + AV+++K+AF W T + RQ
Sbjct: 30 FIDGKFVDSKTTEWIDLHDPATNKVVTRVPKCTQDEMESAVESSKKAFKTWSQTSILGRQ 89
Query: 265 RIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVPN 324
++MFKLQ LIR ++ +LA NIT EQG TL A+ DVL GL+VVE C++ +LQ+GE VPN
Sbjct: 90 QVMFKLQHLIRNNMSELAKNITKEQGKTLVDAEGDVLRGLQVVEHCCSITSLQMGETVPN 149
Query: 325 ALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILA 384
+DTY + PLGV AGICPFNFP M PLWMF +A+TCGNT I+KPSE+ PG +M+L
Sbjct: 150 IAKDMDTYSYTLPLGVTAGICPFNFPAMIPLWMFPVAITCGNTSIIKPSERVPGATMMLM 209
Query: 385 ALAMEAGLPDGVLNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQS 444
L EAG P GV+N++HG +D +N ICD+ IKA+SFV S A +Y RA GKRVQS
Sbjct: 210 ELLNEAGCPPGVVNVIHGAHDAVNFICDNPTIKAVSFVGSDQAGKYIYERAGRNGKRVQS 269
Query: 445 NRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWEDELVELAKA 504
N G KN+ +IM DA+ + TLN L A FGAAG+RC ALSTAVFVG + QW +LVE A+
Sbjct: 270 NMGAKNHGVIMADANKENTLNQLAGAAFGAAGQRCMALSTAVFVGEAKQWIPDLVERARK 329
Query: 505 LKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPT 564
LKVN G DVGPV+S + K +I+ L+++ V GA L+LDGR+I V +ENGNFVGPT
Sbjct: 330 LKVNAGHVPGTDVGPVISPQSKQRINELVESGVKEGAKLVLDGRSIKVENFENGNFVGPT 389
Query: 565 ILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQN 624
IL DV++NM+CY EEIFGPVL+ + D+++EA++M+N N + NG +IFT++G ARKF N
Sbjct: 390 ILTDVSTNMKCYTEEIFGPVLVCLTVDTVDEAVEMINNNPYGNGTAIFTTNGATARKFVN 449
Query: 625 EIEARLVGINVPVPS---SFSSINESGEF----NFCGKSGVQFYTQIKTVAQQWND 673
EI+ VG+NVP+P FS G F +F GK GV+FYTQ KTV Q W +
Sbjct: 450 EIDVGQVGVNVPIPVPLPMFSFTGSRGSFMGDCHFYGKQGVKFYTQTKTVTQLWRE 505
|
Plays a role in valine and pyrimidine metabolism. Binds fatty acyl-CoA. Aedes aegypti (taxid: 7159) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 7 |
| >sp|Q54I10|MMSA_DICDI Probable methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Dictyostelium discoideum GN=mmsdh PE=3 SV=1 | Back alignment and function description |
|---|
Score = 513 bits (1320), Expect = e-144, Method: Compositional matrix adjust.
Identities = 252/477 (52%), Positives = 329/477 (68%), Gaps = 8/477 (1%)
Query: 205 FIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQ 264
FI GKFV+ + ++V NPATQE+ ++VP++T EE + AV AA AFPAW++T V+ R
Sbjct: 33 FINGKFVESKTKEWLEVRNPATQELVTKVPVSTKEEMEAAVKAASDAFPAWRDTSVSNRS 92
Query: 265 RIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVPN 324
RI+ + LI +++DK+A IT EQG TL A+ DV GLEVVE + VA+L +GE V N
Sbjct: 93 RIISNYKNLINKNMDKIAAIITEEQGKTLPDAKGDVFRGLEVVEHSVNVASLMMGETVEN 152
Query: 325 ALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILA 384
+D Y + +PLGVCAGI PFNFP M PLWMF +A+ CGNTF+LKPSE+ P SM L
Sbjct: 153 VSKNVDIYSYVQPLGVCAGITPFNFPAMIPLWMFPLAIACGNTFVLKPSERVPSASMFLV 212
Query: 385 ALAMEAGLPDGVLNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQS 444
LA EAG+PDGV+N++HG + +N ICD +++AISFV + A ++AR A GKRVQS
Sbjct: 213 QLAQEAGVPDGVVNVIHGGKEAVNFICDAPEVRAISFVGADQAGRHIHARGTANGKRVQS 272
Query: 445 NRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWEDELVELAKA 504
N KN+A I+PDA + TL+AL A FGA+G+RC ALS AVFVG S W EL E AK
Sbjct: 273 NMAAKNHATIVPDAHKERTLDALTGAAFGASGQRCMALSAAVFVGESKNWIPELAERAKK 332
Query: 505 LKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVV-PGYENGNFVGP 563
LKV G AD+GPV+S K +I LIQ+ +D GA +LDGRN+VV P + GNFVGP
Sbjct: 333 LKVAGGAAPGADLGPVISAASKQRIHELIQSGIDEGAKCILDGRNVVVDPEFSKGNFVGP 392
Query: 564 TILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQ 623
TIL DV +M CYKEEIFGPVL+ + D++++AI+++N N + NG ++FTSSG ARK+Q
Sbjct: 393 TILTDVKPHMRCYKEEIFGPVLVCLNVDTVDQAIQLINANPYGNGTAVFTSSGAVARKYQ 452
Query: 624 NEIEARLVGINVPVPSS---FSSINESGEF----NFCGKSGVQFYTQIKTVAQQWND 673
EI+ VGIN+P+P FS G F +F GK+GVQF+TQIKT+ W D
Sbjct: 453 REIDVGQVGINLPIPVPLPFFSFTGSRGSFVGAGHFYGKTGVQFFTQIKTITSNWRD 509
|
Plays a role in valine and pyrimidine metabolism. Binds fatty acyl-CoA. Dictyostelium discoideum (taxid: 44689) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 7 |
| >sp|Q7KW39|MMSA_DROME Probable methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Drosophila melanogaster GN=CG17896 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 501 bits (1290), Expect = e-140, Method: Compositional matrix adjust.
Identities = 254/474 (53%), Positives = 334/474 (70%), Gaps = 7/474 (1%)
Query: 205 FIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQ 264
FI GKFV+ + + IDV +PAT +V ++VP T E + A+++ K+AF +W N + TRQ
Sbjct: 29 FIDGKFVESKTNEWIDVHDPATNQVVTRVPKATQAEMQAALESNKKAFRSWSNQSILTRQ 88
Query: 265 RIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVPN 324
++MFKLQ LI+ ++ +LA NIT EQG TL A+ DVL GL+VVE C++ +LQ+GE V N
Sbjct: 89 QVMFKLQALIKENMGELAKNITKEQGKTLADAEGDVLRGLQVVEHCCSIPSLQMGETVAN 148
Query: 325 ALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILA 384
+DTY PLGV AG+ PFNFP M PLWMF +A+T GNT +LKPSE+ PG +M+L
Sbjct: 149 VARDMDTYSLVLPLGVTAGVAPFNFPAMIPLWMFPVAITTGNTMLLKPSERVPGATMLLM 208
Query: 385 ALAMEAGLPDGVLNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQS 444
L EAG P GV+N++HG +D +N ICD +IKA+SFV S A +Y RA GKRVQS
Sbjct: 209 ELLNEAGCPPGVVNVIHGQHDAVNFICDAPEIKAVSFVGSDQAGKYIYERAGKNGKRVQS 268
Query: 445 NRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWEDELVELAKA 504
N G KN+ II+ DA+ + TLN L A FGAAG+RC ALSTAVFVG + W +LVE A+
Sbjct: 269 NMGAKNHGIILGDANKENTLNQLAGAAFGAAGQRCMALSTAVFVGDAQAWIPDLVERAQK 328
Query: 505 LKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPT 564
LKVN G DVGPV+S + +I+ LI++ V GA L+LDGR I VPGYE+G FVGPT
Sbjct: 329 LKVNAGHVPGTDVGPVISAASRQRINDLIESGVKEGAKLILDGRKITVPGYEDGYFVGPT 388
Query: 565 ILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQN 624
IL DVT +M+CY EEIFGPVL+ ++AD+L++AI +VN N + NG ++FT++G AARKF N
Sbjct: 389 ILSDVTPSMKCYTEEIFGPVLVILKADTLDDAIGIVNANPYGNGTAVFTTNGAAARKFVN 448
Query: 625 EIEARLVGINVPVPS-----SFSSINES--GEFNFCGKSGVQFYTQIKTVAQQW 671
EI+A VG+NVP+P SF+ S G+ +F GK G++FYTQ KTV Q W
Sbjct: 449 EIDAGQVGVNVPIPVPLPMFSFTGTRGSFRGDHHFYGKQGIKFYTQTKTVTQLW 502
|
Plays a role in valine and pyrimidine metabolism. Binds fatty acyl-CoA. Drosophila melanogaster (taxid: 7227) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 7 |
| >sp|Q7QC84|MMSA_ANOGA Probable methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Anopheles gambiae GN=AGAP002499 PE=3 SV=2 | Back alignment and function description |
|---|
Score = 498 bits (1281), Expect = e-139, Method: Compositional matrix adjust.
Identities = 244/476 (51%), Positives = 334/476 (70%), Gaps = 7/476 (1%)
Query: 205 FIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQ 264
FI GKFV+ + + ID+ +PAT EV ++VP T +E + AV+++K+A+ W+ + + +RQ
Sbjct: 30 FIDGKFVESKTNDWIDLHDPATNEVVTRVPKCTQDEMQTAVESSKKAYKTWRQSSILSRQ 89
Query: 265 RIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVPN 324
++M KLQ +IR ++ +LA NIT EQG TL A+ DVL GL+VVE C++ +LQ+GE VPN
Sbjct: 90 QVMLKLQHIIRNNMSELAKNITKEQGKTLIDAEGDVLRGLQVVEHCCSITSLQMGETVPN 149
Query: 325 ALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILA 384
+DTY + PLGV AGI PFNFP M PLWMF +A+TCGNT I+KPSE+ PG +M+L
Sbjct: 150 IAKDMDTYSYHLPLGVTAGIAPFNFPAMIPLWMFPVAITCGNTSIIKPSERVPGATMLLM 209
Query: 385 ALAMEAGLPDGVLNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQS 444
+ EAG P GV+N++HG +D +N +CD+ DI+A+SFV S A +Y RA GKRVQ
Sbjct: 210 EMLNEAGCPPGVVNVIHGAHDAVNFVCDNPDIRAVSFVGSDQAGKYIYERAGRNGKRVQC 269
Query: 445 NRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWEDELVELAKA 504
N G KN+ +IM DA+ + TLN L A FGAAG+RC ALSTAVFVG + W +LVE A+
Sbjct: 270 NMGAKNHGVIMADANKENTLNQLAGAAFGAAGQRCMALSTAVFVGEARNWIPDLVERARK 329
Query: 505 LKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPT 564
LKVN G D+GPV+S + K +I+ L+++ GA ++LDGRNI V G+E GNFVGPT
Sbjct: 330 LKVNAGHLPGTDLGPVISPQSKQRINELVESGAKEGAKIVLDGRNIKVEGFEKGNFVGPT 389
Query: 565 ILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQN 624
I+ DVT NM+CY EEIFGPVL+ + D+++EAI+++N N + NG +IFT++G ARKF N
Sbjct: 390 IISDVTPNMKCYTEEIFGPVLVCLSVDTIDEAIELINNNPYGNGTAIFTTNGATARKFVN 449
Query: 625 EIEARLVGINVPVPS---SFSSINESGEF----NFCGKSGVQFYTQIKTVAQQWND 673
+I+ VG+NVP+P FS G F +F GK G++FYTQ KTV Q W +
Sbjct: 450 DIDVGQVGVNVPIPVPLPMFSFTGSRGSFLGDCHFYGKQGIKFYTQTKTVTQLWRE 505
|
Plays a role in valine and pyrimidine metabolism. Binds fatty acyl-CoA. Anopheles gambiae (taxid: 7165) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 7 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1035 | ||||||
| 359495852 | 1040 | PREDICTED: uncharacterized protein LOC10 | 0.971 | 0.966 | 0.673 | 0.0 | |
| 255583235 | 1050 | methylmalonate-semialdehyde dehydrogenas | 0.975 | 0.961 | 0.656 | 0.0 | |
| 255554607 | 709 | methylmalonate-semialdehyde dehydrogenas | 0.658 | 0.961 | 0.671 | 0.0 | |
| 359475612 | 712 | PREDICTED: methylmalonate-semialdehyde d | 0.657 | 0.956 | 0.683 | 0.0 | |
| 296085607 | 592 | unnamed protein product [Vitis vinifera] | 0.528 | 0.923 | 0.685 | 0.0 | |
| 224084463 | 496 | predicted protein [Populus trichocarpa] | 0.471 | 0.983 | 0.751 | 0.0 | |
| 225429271 | 539 | PREDICTED: methylmalonate-semialdehyde d | 0.499 | 0.959 | 0.683 | 0.0 | |
| 255554609 | 541 | methylmalonate-semialdehyde dehydrogenas | 0.490 | 0.939 | 0.686 | 0.0 | |
| 118486321 | 542 | unknown [Populus trichocarpa] | 0.471 | 0.900 | 0.693 | 0.0 | |
| 224103847 | 496 | predicted protein [Populus trichocarpa] | 0.471 | 0.983 | 0.693 | 0.0 |
| >gi|359495852|ref|XP_002266379.2| PREDICTED: uncharacterized protein LOC100254417 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1417 bits (3669), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 715/1061 (67%), Positives = 828/1061 (78%), Gaps = 56/1061 (5%)
Query: 1 MEQKKMIPPPPGTFQDREDLIKHVRDFGTNQGYVVTIKKSRKDRRVILGCDRGGVYRNRR 60
M+Q M+PPPPGTFQDREDLIKHVRDFG NQGYVVTIKKSRKDRRVILGCDRGGVYRNRR
Sbjct: 10 MDQSNMLPPPPGTFQDREDLIKHVRDFGANQGYVVTIKKSRKDRRVILGCDRGGVYRNRR 69
Query: 61 KIDENKRKRKACSRLINCPFEAIGKKEDDVWVLTIKNGEHNHEPFKDMSEHPYSRRFSEE 120
KI+E+KRKRKACSRLINCPFEAIGKKEDD+WVLTIKNGEHNHEPFKDMS+HPYSRRFSE+
Sbjct: 70 KIEESKRKRKACSRLINCPFEAIGKKEDDLWVLTIKNGEHNHEPFKDMSQHPYSRRFSED 129
Query: 121 EVKQIKLMTEAGIKPRQVLKALKQSNPELQSTPRHLYNLKAKIRQGNLSEKSFKSWRPNR 180
EV+QIKLMT+AGIKPRQVLKALK++NPELQSTPRHLYNLKAKIRQGN+SEKSFKSWRPNR
Sbjct: 130 EVRQIKLMTDAGIKPRQVLKALKKNNPELQSTPRHLYNLKAKIRQGNISEKSFKSWRPNR 189
Query: 181 STPVNTSAS-PSGVSPNIDNNRVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYE 239
S PVNT+ S NI +V N IGGKFVD + A IDVINPATQEV S+VPLTTYE
Sbjct: 190 SVPVNTTNPLESSSKHNIHPLKVPNLIGGKFVDSQACAIIDVINPATQEVVSEVPLTTYE 249
Query: 240 EFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRD 299
EFK AV AAK+A+P+W+NTPV TRQRIMFKLQELIRRDIDKLAMNIT+EQG TLK AQ D
Sbjct: 250 EFKAAVSAAKQAYPSWRNTPVTTRQRIMFKLQELIRRDIDKLAMNITIEQGKTLKGAQGD 309
Query: 300 VLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFS 359
VL GLEVVE AC +ATLQ+GEFVPNA G+DTYC REPLGVCAGICPFNFP M LWMF
Sbjct: 310 VLRGLEVVEHACGMATLQMGEFVPNASNGIDTYCLREPLGVCAGICPFNFPAMISLWMFP 369
Query: 360 IAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGTNDVINHICDDEDIKAI 419
IAVTCGNTFILKPSEKNPG SMILAALAMEAGLP GVLNIVHGTND++N+ICDD+DIKA+
Sbjct: 370 IAVTCGNTFILKPSEKNPGASMILAALAMEAGLPHGVLNIVHGTNDIVNYICDDDDIKAV 429
Query: 420 SFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERC 479
SFV S+TA + +YARAAARGKRVQSN G KN+AIIMPDAS++ATLNALV+AGFGAAG+RC
Sbjct: 430 SFVGSNTAGMNIYARAAARGKRVQSNMGAKNHAIIMPDASMEATLNALVAAGFGAAGQRC 489
Query: 480 TALSTAVFVGSSVQWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDN 539
ALSTAVFVG S+ WE+ELV AKALKVN GT+ AD+GPV+S E KD+I RL+QN V +
Sbjct: 490 MALSTAVFVGGSIPWEEELVACAKALKVNAGTEPGADLGPVISKEAKDRICRLVQNDVGS 549
Query: 540 GASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKM 599
GA L+LDGRNIVVPGYE GNFVGPTIL DVT+NMECYKEEIFGPVLL M+ADSLEEAI +
Sbjct: 550 GARLVLDGRNIVVPGYEYGNFVGPTILCDVTTNMECYKEEIFGPVLLCMKADSLEEAITI 609
Query: 600 VNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPVP-----SSF--SSINESGEFNF 652
VNRN+ NGASIFT+SG+AARKFQNE+EA LVGINVPVP SSF S ++ +G+ NF
Sbjct: 610 VNRNKCSNGASIFTTSGVAARKFQNEVEAGLVGINVPVPVPLPFSSFTGSKLSFAGDLNF 669
Query: 653 CGKSGVQFYTQIKTVAQQWNDLPKLGMPLTMPLSSETDMRSQGVSSVFPQSSERESPSPR 712
CGK+GVQFYTQIKTVAQQW DLP G+ L P SETD+ S+GVS +SER+ S
Sbjct: 670 CGKAGVQFYTQIKTVAQQWKDLPSRGVLLANPPLSETDITSRGVSLGLLPTSERDLSSQG 729
Query: 713 VSPAMSSASERDSPSHEVLLSIPFTSERELSDPGVS-SLSPTANVDLPVQGVSLFTSPII 771
VSPA +P TSER+L G S + PT ++D+ QG SL SP
Sbjct: 730 VSPA-----------------VPPTSERDLHINGASLPVPPTTDLDMQSQGGSL-ASPAT 771
Query: 772 --MDLSNRETSLAMPSATVGDLSSQVLSLPMPQTSERLYMLQTSNWKSPPI-TSRRTDAI 828
MD+ ++E SL+MPS T DL +Q +SL PQ SER+Y+ Q S+W + TS+RT+ I
Sbjct: 772 SEMDVPDQEMSLSMPSETERDLRTQGMSLGTPQASERMYLPQKSHWNDTLLPTSQRTETI 831
Query: 829 HPPSERIYMPCTSQRNDNTARTSQRTDTAMSLPCDNAYVPMSCKTDSIGQLSHRNDGMAQ 888
P SERIY P TS RNDN +QRTD AM + Y+P + SHRND M
Sbjct: 832 APTSERIYAPTTSHRNDNMVTVTQRTDMAMVPSSEGVYMPTT---------SHRNDNMVP 882
Query: 889 ASHQADATLNQTSDRTYMFSTSLLNDTVSQTFHRTNTTLFPTSEKIYIPCASPGKDHIGS 948
+S + DAT++ T +R Y+ +TS ND + QT RT+ T+ SE++Y+P S D++GS
Sbjct: 883 SSQRTDATVHPT-ERVYVLATSHRNDNMVQTSQRTDITMHAASERVYMPATSHRNDNMGS 941
Query: 949 PALRTDIHLH--------------SNIASASQPADVLPPTSERMYMSPLVQRNAGMPPTS 994
+ R DI +H ++A SQ D++P SERMYM V RN GMPPTS
Sbjct: 942 TSQRPDIAVHPTEKIYMSATSHRNDSMAPTSQRTDIMPQASERMYMPSAVHRNGGMPPTS 1001
Query: 995 ERLYMPATSSSQRIYTQNPMLQLDDFSSQGSSITLPTSQRI 1035
ERLY+P T SQR+YTQNPM+ +D+FS QG+S+T PTSQRI
Sbjct: 1002 ERLYIPGT--SQRMYTQNPMISIDEFSGQGASLTFPTSQRI 1040
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255583235|ref|XP_002532382.1| methylmalonate-semialdehyde dehydrogenase, putative [Ricinus communis] gi|223527906|gb|EEF29994.1| methylmalonate-semialdehyde dehydrogenase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 1363 bits (3529), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 696/1060 (65%), Positives = 824/1060 (77%), Gaps = 50/1060 (4%)
Query: 1 MEQKKMIPPPPGTFQDREDLIKHVRDFGTNQGYVVTIKKSRKDRRVILGCDRGGVYRNRR 60
M Q +M+PP PGTFQDRE+LIK+VRDFG NQGYVVTIKKSRKDRRVILGCDRGGVYRNRR
Sbjct: 10 MGQCQMLPPEPGTFQDREELIKYVRDFGANQGYVVTIKKSRKDRRVILGCDRGGVYRNRR 69
Query: 61 KIDENKRKRKACSRLINCPFEAIGKKEDDVWVLTIKNGEHNHEPFKDMSEHPYSRRFSEE 120
KI+E++RKRKACSRLINCPFEAIGKKEDD+W+LT+KNG+HNHEP KDM EHPYSRRFSEE
Sbjct: 70 KIEESQRKRKACSRLINCPFEAIGKKEDDLWILTVKNGDHNHEPLKDMLEHPYSRRFSEE 129
Query: 121 EVKQIKLMTEAGIKPRQVLKALKQSNPELQSTPRHLYNLKAKIRQGNLSEKSFKSWRPNR 180
EV+QIK+MTEAG+KPRQVLKALKQSNPELQSTPRHLYNLKAKIRQGN+SE+SFKSWRPNR
Sbjct: 130 EVRQIKMMTEAGVKPRQVLKALKQSNPELQSTPRHLYNLKAKIRQGNISERSFKSWRPNR 189
Query: 181 STPVNTSASPSGVSPNIDNN--RVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTY 238
S PVNTS +P+G S +N +V NFIGGKFV+ +GS IDVINPA+QEV SQVPLTTY
Sbjct: 190 SIPVNTSTTPAGGSLMQNNQPLKVPNFIGGKFVESQGSTIIDVINPASQEVVSQVPLTTY 249
Query: 239 EEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQR 298
EEFKDAV AAK+AFP WKNTP+ATRQRIMFKLQELIRRD+DKL +NIT+EQG TLK A
Sbjct: 250 EEFKDAVIAAKKAFPLWKNTPIATRQRIMFKLQELIRRDMDKLVVNITLEQGKTLKGALG 309
Query: 299 DVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMF 358
D+L GLEVVE AC +ATLQ+GEFVPNA G+DTYC REPLGVCAGICPFNFP PLWMF
Sbjct: 310 DILRGLEVVEHACGMATLQMGEFVPNACNGIDTYCIREPLGVCAGICPFNFPATIPLWMF 369
Query: 359 SIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGTNDVINHICDDEDIKA 418
IAVTCGNTF+LKP EKNPG SMIL ALA EAGLPDGVLNIVHGTND++N+ICDD+DIKA
Sbjct: 370 PIAVTCGNTFVLKPCEKNPGASMILGALAKEAGLPDGVLNIVHGTNDIVNYICDDDDIKA 429
Query: 419 ISFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGER 478
IS ++S + + ARAAARGKRVQSN GGKN+AIIMPDAS+D TLNALV+AGFGAAG+R
Sbjct: 430 ISLISSDITRMHIQARAAARGKRVQSNIGGKNHAIIMPDASMDDTLNALVAAGFGAAGQR 489
Query: 479 CTALSTAVFVGSSVQWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVD 538
ALSTAVFVG S+ WEDEL+E AKALKVN GTD SAD+GPV+S EVKD+ISRL+QN VD
Sbjct: 490 GMALSTAVFVGGSMTWEDELLERAKALKVNAGTDPSADIGPVISKEVKDRISRLVQNGVD 549
Query: 539 NGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIK 598
+GA LLLDGRNI+VPGYE G+FVGPTIL DVT+NM+CYKEEIFGPVLL MQADS+EEAI
Sbjct: 550 SGARLLLDGRNILVPGYEKGSFVGPTILCDVTTNMDCYKEEIFGPVLLCMQADSIEEAIN 609
Query: 599 MVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPVPSSF-------SSINESGEFN 651
+VNRNR+ NGASIFT+SG+AARKFQN+I++ LVG+NVPVP + + +G+ N
Sbjct: 610 IVNRNRYGNGASIFTTSGVAARKFQNDIDSGLVGVNVPVPVPVPVSSSSEAKASFAGDLN 669
Query: 652 FCGKSGVQFYTQIKTVAQQWNDLPKLGMPLTMPLSSETDMRSQGVSSVFPQSSERESPSP 711
FCGK+ QFYTQIKTVAQQW LP LG+ L+M S +T+ +QG SSV P +R+SP+
Sbjct: 670 FCGKASAQFYTQIKTVAQQWRGLPSLGVSLSMLASFDTEA-TQGFSSVPP--PQRDSPNE 726
Query: 712 RVSPAMSSASERDSPSHEVLLSIPFTSERELSDPGVSSLSPTANVDLPVQGVSLFTSPII 771
R S AS+R+SP H EL + GVS + + D+P Q VSL P
Sbjct: 727 RALQDTSLASKRNSPKHG-----------ELPNSGVSFMPEIVDGDIPGQRVSLILPPRA 775
Query: 772 -MDLSNRETSLAMPSATVGDLSSQVLSLPMPQTSERLYMLQTSNWKS-PPITSRRTDAIH 829
DL +RE SLA+ AT SSQ +S QTSE +Y QTS W P +TS+RT+ I
Sbjct: 776 EQDLLDRENSLAILPATESGSSSQEMS----QTSESIYRPQTSEWNGRPSLTSQRTEGIP 831
Query: 830 PPSERIYMPCTSQRNDNTARTSQRTDTAMSLPCDNAYVPMSCKTDSIGQLSHRNDGMAQA 889
S+R+++P TSQRN N +S+ +D AM+L + YV ++D++G LSHRND M
Sbjct: 832 STSQRVFIP-TSQRNGNVGSSSKSSDAAMTLTSECGYVSTFHESDNMGSLSHRNDSMTPT 890
Query: 890 SHQADATLNQTSDRTY-MFSTSLLNDTVSQTFHRTNTTLFPTSEKIYIPCASPGKDHIGS 948
S + DAT++ S+R Y + + S LN+++ QTF R N T+FPTSE+ YIP + DHIGS
Sbjct: 891 SRRTDATIHPASERLYDILAASHLNNSMGQTFQR-NETMFPTSERRYIPATAHRNDHIGS 949
Query: 949 PALRTDIHLHSN---------------IASASQPADVLPPTSERMYMSPLVQRNAGMPPT 993
+ R DI ++ + ASQ AD LPP SE +YM +VQRN PT
Sbjct: 950 TSQRPDISSQASSDRIYVTGTSQRTDTVIPASQRADTLPP-SETIYMPTIVQRNNSAQPT 1008
Query: 994 SERLYMPATSSSQRIYTQNPMLQLDDFSSQGSSITLPTSQ 1033
ERLYMP T SQR+YT+NPM+ ++DFSSQG S+TLPTSQ
Sbjct: 1009 LERLYMPLT--SQRMYTENPMISMNDFSSQGVSMTLPTSQ 1046
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255554607|ref|XP_002518342.1| methylmalonate-semialdehyde dehydrogenase, putative [Ricinus communis] gi|223542562|gb|EEF44102.1| methylmalonate-semialdehyde dehydrogenase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 968 bits (2503), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/700 (67%), Positives = 561/700 (80%), Gaps = 18/700 (2%)
Query: 3 QKKMIPPPPGTFQDREDLIKHVRDFGTNQGYVVTIKKSRKDRRVILGCDRGGVYRNRRKI 62
++M+PPPPGTF DRE+LI+HV DF +QGYVVTIK+S++DR VILGCDRGGVYRNRRK
Sbjct: 12 HRQMLPPPPGTFIDREELIQHVGDFAVSQGYVVTIKQSKRDRVVILGCDRGGVYRNRRKA 71
Query: 63 DENK-----RKRKACSRLINCPFEAIGKKEDDVWVLTIKNGEHNHEPFKDMSEHPYSRRF 117
E RKRK+ SRL NCPFE +GKK+D +W+LTIKNG HNHEP KD+SEHP +RRF
Sbjct: 72 AEESSAERIRKRKSGSRLTNCPFECVGKKDDGLWILTIKNGTHNHEPLKDISEHPTARRF 131
Query: 118 SEEEVKQIKLMTEAGIKPRQVLKALKQSNPELQSTPRHLYNLKAKIRQGNLSEKSFKSWR 177
SEEE++ IK MTEAG+KPRQ+LK L+QSNP+L STP+H+YN+KAKIRQGNL+ + F+S R
Sbjct: 132 SEEEIRLIKEMTEAGLKPRQILKRLRQSNPDLLSTPKHVYNVKAKIRQGNLTVRHFRSLR 191
Query: 178 PNRSTPVNTSASPSGVSPNIDNN---RVSNFIGGKFVDLRGSATIDVINPATQEVGSQVP 234
++S N+S S + P+ + RV N IGGKF+D + ATIDVINPATQ V SQVP
Sbjct: 192 TDKSAAGNSSFSAT--EPSWRQHYPMRVPNLIGGKFIDSQSFATIDVINPATQYVVSQVP 249
Query: 235 LTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLK 294
LTT EEF+ AV AAKRAFPAW+NTP+ TRQRIMFK QELI+RDIDKLAM+IT E G LK
Sbjct: 250 LTTNEEFRAAVFAAKRAFPAWRNTPITTRQRIMFKFQELIQRDIDKLAMSITTEHGKALK 309
Query: 295 AAQRDVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTP 354
A DV GLEVVE AC +ATLQIGEFV N G DTY REPLG+CAGICPF+FP M P
Sbjct: 310 DAYGDVSRGLEVVEHACGLATLQIGEFVSNVSNGTDTYSIREPLGICAGICPFDFPAMIP 369
Query: 355 LWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGTNDVINHICDDE 414
LWMF IAVTCGNTFILKP EK+PG S+ILA LAMEAGLP+GVLNIVHGTND++N ICDD+
Sbjct: 370 LWMFPIAVTCGNTFILKPPEKDPGASVILAELAMEAGLPNGVLNIVHGTNDIVNAICDDD 429
Query: 415 DIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGA 474
DIKAISFV ++ +YA+A+A+GKRVQSN G KN+A++MPDAS+DATL ALV+AGFG
Sbjct: 430 DIKAISFVGPNSVGAYVYAKASAKGKRVQSNIGAKNHAVVMPDASVDATLKALVAAGFGG 489
Query: 475 AGERCTALSTAVFVGSSVQWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQ 534
AG++C ALST VFVG WE++LVE AKALKV GT+ A++GPV+S + K++I LIQ
Sbjct: 490 AGQKCMALSTVVFVGGISPWEEKLVEHAKALKVTAGTEPDAELGPVISKQAKERICTLIQ 549
Query: 535 NAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLE 594
+++NGA L+LDGRNI+VPGYE+GNF+GPTIL DV+ +MECYKEEIFGPVLL MQAD++E
Sbjct: 550 TSIENGAKLVLDGRNIMVPGYEHGNFMGPTILSDVSVDMECYKEEIFGPVLLCMQADTIE 609
Query: 595 EAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVP--VPSSFSSINES----- 647
EAI +VNRN+F NGASIFTSSG+AARKFQ EIEA VGINV VP FSS+ S
Sbjct: 610 EAINIVNRNKFSNGASIFTSSGVAARKFQTEIEAGQVGINVAISVPLPFSSVISSKPSFA 669
Query: 648 GEFNFCGKSGVQFYTQIKTVAQQWNDLPKLGMPLTMPLSS 687
G+ NF GK+G+QFYTQIKTV QQW DLP + MPL S
Sbjct: 670 GDVNFDGKAGIQFYTQIKTVTQQWRDLPSEELS-AMPLPS 708
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359475612|ref|XP_002266616.2| PREDICTED: methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 967 bits (2501), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 478/699 (68%), Positives = 563/699 (80%), Gaps = 18/699 (2%)
Query: 2 EQKKMIPPPPGTFQDREDLIKHVRDFGTNQGYVVTIKKSRKDRRVILGCDRGGVYRNRRK 61
E +M+PPPPG+F DRE+LI+HV DF +QGYVVTIK+S+KD+ V+LGCDRGGVYRNRRK
Sbjct: 11 EIPQMLPPPPGSFIDREELIQHVGDFALSQGYVVTIKQSKKDKVVVLGCDRGGVYRNRRK 70
Query: 62 -IDENK----RKRKACSRLINCPFEAIGKKEDDVWVLTIKNGEHNHEPFKDMSEHPYSRR 116
+DE+ RKRK SRL NCPFE +GKKED +WVL IKNGEHNH+P +D+SEHP SRR
Sbjct: 71 LVDESSAEQVRKRKTGSRLTNCPFEVVGKKEDGLWVLAIKNGEHNHDPIRDISEHPSSRR 130
Query: 117 FSEEEVKQIKLMTEAGIKPRQVLKALKQSNPELQSTPRHLYNLKAKIRQGNLSEKSFKSW 176
F+E EV IK MTEAG+KPRQ+LK L+Q+NPEL STP+H+YN+KAK+RQGNL+ ++FKS
Sbjct: 131 FTEREVLLIKDMTEAGLKPRQILKRLRQNNPELLSTPKHVYNVKAKLRQGNLTVRNFKSL 190
Query: 177 RPNRS---TPVNTSASPSGVSPNIDNNRVSNFIGGKFVDLRGSATIDVINPATQEVGSQV 233
R S + ++T+ PS N RV N IGG+FVD + A+IDV NPATQ+V SQV
Sbjct: 191 RVKSSVENSHISTANEPSWRQRN--PPRVPNLIGGRFVDSQSFASIDVTNPATQKVVSQV 248
Query: 234 PLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTL 293
PLTT EEF+ A+ AAKRAFP+W++TPV TRQRIMFK QELIRRDIDK+AMNIT E G TL
Sbjct: 249 PLTTNEEFRAAIFAAKRAFPSWRDTPVTTRQRIMFKFQELIRRDIDKIAMNITTEHGKTL 308
Query: 294 KAAQRDVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMT 353
K A DV GLEVVE AC +ATLQ+GEFV N G+DTY REPLGVCAGICPF+FP M
Sbjct: 309 KDAYTDVHRGLEVVEHACGMATLQMGEFVSNVSNGIDTYSIREPLGVCAGICPFDFPAMI 368
Query: 354 PLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGTNDVINHICDD 413
PLWMF IAVTCGNTFILKPSEK+PG ++ILA LAMEAGLP+GVLNIVHGT D+IN ICDD
Sbjct: 369 PLWMFPIAVTCGNTFILKPSEKDPGATIILAELAMEAGLPNGVLNIVHGTVDIINAICDD 428
Query: 414 EDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFG 473
+DIKAISFV S+T + +YARA+A+GKRVQSN G KN+AI+MPDAS DATLNALVSAGFG
Sbjct: 429 DDIKAISFVGSNTDGMYIYARASAKGKRVQSNIGAKNHAIVMPDASKDATLNALVSAGFG 488
Query: 474 AAGERCTALSTAVFVGSSVQWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLI 533
AAG+RC LST VFVG S WED+LVE AKALKVN G + AD+GPV+S +VK++I RLI
Sbjct: 489 AAGQRCMVLSTVVFVGGSKSWEDKLVECAKALKVNAGIEPDADLGPVISKQVKERICRLI 548
Query: 534 QNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSL 593
Q VD+GA L+LDGRNI VPGYE+GNF+GPTIL DVT+NM CYKEEIFGPVLL MQAD+L
Sbjct: 549 QAGVDSGARLVLDGRNIEVPGYEHGNFIGPTILSDVTANMLCYKEEIFGPVLLCMQADNL 608
Query: 594 EEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPVPS-----SFSSINES- 647
+EAI +VN+N++ GASIFT+SG+AARKFQ EIEA VGINVPVP SF+ S
Sbjct: 609 QEAISIVNKNKYGIGASIFTTSGVAARKFQTEIEAGEVGINVPVPDPLPFFSFTGSKASF 668
Query: 648 -GEFNFCGKSGVQFYTQIKTVAQQWNDLPK-LGMPLTMP 684
G+ NF GK+GV FYTQIKTV QQW DLP G+ L MP
Sbjct: 669 AGDLNFFGKAGVHFYTQIKTVTQQWKDLPSDSGVSLIMP 707
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: N/A Phylum: Streptophyta Superkingdom: |
| >gi|296085607|emb|CBI29382.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 785 bits (2028), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/557 (68%), Positives = 451/557 (80%), Gaps = 10/557 (1%)
Query: 2 EQKKMIPPPPGTFQDREDLIKHVRDFGTNQGYVVTIKKSRKDRRVILGCDRGGVYRNRRK 61
E +M+PPPPG+F DRE+LI+HV DF +QGYVVTIK+S+KD+ V+LGCDRGGVYRNRRK
Sbjct: 11 EIPQMLPPPPGSFIDREELIQHVGDFALSQGYVVTIKQSKKDKVVVLGCDRGGVYRNRRK 70
Query: 62 I-----DENKRKRKACSRLINCPFEAIGKKEDDVWVLTIKNGEHNHEPFKDMSEHPYSRR 116
+ E RKRK SRL NCPFE +GKKED +WVL IKNGEHNH+P +D+SEHP SRR
Sbjct: 71 LVDESSAEQVRKRKTGSRLTNCPFEVVGKKEDGLWVLAIKNGEHNHDPIRDISEHPSSRR 130
Query: 117 FSEEEVKQIKLMTEAGIKPRQVLKALKQSNPELQSTPRHLYNLKAKIRQGNLSEKSFKSW 176
F+E EV IK MTEAG+KPRQ+LK L+Q+NPEL STP+H+YN+KAK+RQGNL+ ++FKS
Sbjct: 131 FTEREVLLIKDMTEAGLKPRQILKRLRQNNPELLSTPKHVYNVKAKLRQGNLTVRNFKSL 190
Query: 177 RPNRS---TPVNTSASPSGVSPNIDNNRVSNFIGGKFVDLRGSATIDVINPATQEVGSQV 233
R S + ++T+ PS N RV N IGG+FVD + A+IDV NPATQ+V SQV
Sbjct: 191 RVKSSVENSHISTANEPSWRQRN--PPRVPNLIGGRFVDSQSFASIDVTNPATQKVVSQV 248
Query: 234 PLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTL 293
PLTT EEF+ A+ AAKRAFP+W++TPV TRQRIMFK QELIRRDIDK+AMNIT E G TL
Sbjct: 249 PLTTNEEFRAAIFAAKRAFPSWRDTPVTTRQRIMFKFQELIRRDIDKIAMNITTEHGKTL 308
Query: 294 KAAQRDVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMT 353
K A DV GLEVVE AC +ATLQ+GEFV N G+DTY REPLGVCAGICPF+FP M
Sbjct: 309 KDAYTDVHRGLEVVEHACGMATLQMGEFVSNVSNGIDTYSIREPLGVCAGICPFDFPAMI 368
Query: 354 PLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGTNDVINHICDD 413
PLWMF IAVTCGNTFILKPSEK+PG ++ILA LAMEAGLP+GVLNIVHGT D+IN ICDD
Sbjct: 369 PLWMFPIAVTCGNTFILKPSEKDPGATIILAELAMEAGLPNGVLNIVHGTVDIINAICDD 428
Query: 414 EDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFG 473
+DIKAISFV S+T + +YARA+A+GKRVQSN G KN+AI+MPDAS DATLNALVSAGFG
Sbjct: 429 DDIKAISFVGSNTDGMYIYARASAKGKRVQSNIGAKNHAIVMPDASKDATLNALVSAGFG 488
Query: 474 AAGERCTALSTAVFVGSSVQWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLI 533
AAG+RC LST VFVG S WED+LVE AKALKVN G + AD+GPV+S +VK++I RLI
Sbjct: 489 AAGQRCMVLSTVVFVGGSKSWEDKLVECAKALKVNAGIEPDADLGPVISKQVKERICRLI 548
Query: 534 QNAVDNGASLLLDGRNI 550
Q VD+GA L+LDGRNI
Sbjct: 549 QAGVDSGARLVLDGRNI 565
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224084463|ref|XP_002307307.1| predicted protein [Populus trichocarpa] gi|222856756|gb|EEE94303.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 773 bits (1995), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/495 (75%), Positives = 423/495 (85%), Gaps = 7/495 (1%)
Query: 201 RVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPV 260
+V NFIGGKFV +G IDV+NPATQEV S +PLTTYEEFKDAV AAKRAFP+WKNTP+
Sbjct: 2 KVPNFIGGKFVVSQGCTIIDVLNPATQEVVSHLPLTTYEEFKDAVIAAKRAFPSWKNTPI 61
Query: 261 ATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGE 320
ATRQR+MF+ QELIRRD+DKLA +IT EQG TLK A DVL GLE VE ACA+ATLQ+GE
Sbjct: 62 ATRQRVMFRFQELIRRDMDKLATSITSEQGKTLKGALGDVLCGLEAVEHACAMATLQMGE 121
Query: 321 FVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTS 380
FVPNA G+DTYC REPLGVCAGICPFNFP M PLWMF IAVTCGNTF+LKP EKNPG S
Sbjct: 122 FVPNASNGIDTYCIREPLGVCAGICPFNFPAMIPLWMFPIAVTCGNTFVLKPCEKNPGAS 181
Query: 381 MILAALAMEAGLPDGVLNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAARGK 440
MILAALA+EAG PDGVLN++HGTND++N+ICDD+D+KAISF+ S A + +YARAAARGK
Sbjct: 182 MILAALAVEAGFPDGVLNVIHGTNDIVNYICDDDDVKAISFIGSDLAGLHIYARAAARGK 241
Query: 441 RVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWEDELVE 500
RVQSN GGKN+AII+PDASID TLNALV+AGFGAAG+RC ALSTAVFVG S WE ELVE
Sbjct: 242 RVQSNIGGKNHAIILPDASIDDTLNALVAAGFGAAGQRCMALSTAVFVGGSSAWEHELVE 301
Query: 501 LAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNF 560
AKALKVN GTD SAD+GPV+S EVKD+I RL+Q+ VD+GA LLLDGRNIVVPGYENG+F
Sbjct: 302 HAKALKVNAGTDPSADLGPVISKEVKDRICRLVQSGVDSGARLLLDGRNIVVPGYENGSF 361
Query: 561 VGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAAR 620
VGPTIL DVT +MECYKEEI GPVLL MQADSLEEAI +VNRNR+ NGASIFT+SG+AAR
Sbjct: 362 VGPTILCDVTISMECYKEEILGPVLLCMQADSLEEAITIVNRNRYGNGASIFTTSGVAAR 421
Query: 621 KFQNEIEARLVGIN--VPVPSSFSSINE-----SGEFNFCGKSGVQFYTQIKTVAQQWND 673
KFQN+I+A LVGIN VPVP SS +E +G NFCGK+GVQFYTQIKTVAQQW +
Sbjct: 422 KFQNDIDAVLVGINVSVPVPLPCSSFHEAKVSFAGNLNFCGKTGVQFYTQIKTVAQQWRE 481
Query: 674 LPKLGMPLTMPLSSE 688
LP +G+ L+M S+E
Sbjct: 482 LPSIGVSLSMHTSNE 496
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225429271|ref|XP_002266390.1| PREDICTED: methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial [Vitis vinifera] gi|296085606|emb|CBI29381.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 734 bits (1896), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/531 (68%), Positives = 428/531 (80%), Gaps = 14/531 (2%)
Query: 171 KSFKSWRPNR----STPVNTSASPSGVSPNIDNNRVSNFIGGKFVDLRGSATIDVINPAT 226
++FKS RP ++ +T+ PS S + RV N IGG FVD + S IDVINPAT
Sbjct: 10 RNFKSLRPELFALGNSRFSTATEPS--SKQRNPPRVPNLIGGSFVDSQSSEFIDVINPAT 67
Query: 227 QEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNIT 286
Q+V SQ+PLT+ EEFK AV AAK+AFPAW+NTPV TRQRIMFKLQ+LIRRDIDKLAMNIT
Sbjct: 68 QQVVSQIPLTSNEEFKAAVSAAKQAFPAWRNTPVTTRQRIMFKLQQLIRRDIDKLAMNIT 127
Query: 287 VEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICP 346
EQG TLK A DV GLEVVE AC +ATLQ+GEFVPN G+DTY REPLGVCAGICP
Sbjct: 128 TEQGKTLKDAHGDVFRGLEVVEHACGMATLQMGEFVPNVSSGIDTYSIREPLGVCAGICP 187
Query: 347 FNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGTNDV 406
FNFP M PLWMF IAVTCGNTF+LKPSEK+PG S++LA LAMEAGLPDGVLNIVHGT ++
Sbjct: 188 FNFPAMIPLWMFPIAVTCGNTFVLKPSEKDPGASLMLAELAMEAGLPDGVLNIVHGTRNI 247
Query: 407 INHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMPDASIDATLNA 466
+N ICDDEDI+A+SFV S+TA + +Y+RA+A+GKRVQSN G KN+AI++PDAS+DATLNA
Sbjct: 248 VNAICDDEDIRAVSFVGSNTAGMHIYSRASAKGKRVQSNMGAKNHAIVLPDASLDATLNA 307
Query: 467 LVSAGFGAAGERCTALSTAVFVGSSVQWEDELVELAKALKVNVGTDASADVGPVVSVEVK 526
LV+AGFGAAG+RC ALST VFVG S WED+L+E AKALKVN GT+ AD+GPV+S E K
Sbjct: 308 LVAAGFGAAGQRCMALSTVVFVGDSKSWEDKLLERAKALKVNSGTEPDADLGPVISKEAK 367
Query: 527 DQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLL 586
++I +LIQN VD+GA L+LDGRNIVVPGYE+GNF+GPTIL DVT++MECYKEEIFGPVLL
Sbjct: 368 ERICKLIQNGVDSGARLVLDGRNIVVPGYEHGNFIGPTILSDVTADMECYKEEIFGPVLL 427
Query: 587 NMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPVPS-----SF 641
+QADSL+EAI +VNRN++ NGASIFTSSG+ ARKFQ EIEA VGINVP+P SF
Sbjct: 428 CIQADSLDEAINIVNRNKYGNGASIFTSSGVDARKFQTEIEAGQVGINVPIPVPLPFFSF 487
Query: 642 SSINES--GEFNFCGKSGVQFYTQIKTVAQQWNDLPK-LGMPLTMPLSSET 689
+ S G+ NF GK+GVQFYTQIKTV QQW L G+ L MP S ++
Sbjct: 488 TGSKASFAGDLNFYGKAGVQFYTQIKTVTQQWKGLASGSGVSLAMPTSQKS 538
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: N/A Phylum: Streptophyta Superkingdom: |
| >gi|255554609|ref|XP_002518343.1| methylmalonate-semialdehyde dehydrogenase, putative [Ricinus communis] gi|223542563|gb|EEF44103.1| methylmalonate-semialdehyde dehydrogenase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 729 bits (1883), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/517 (68%), Positives = 417/517 (80%), Gaps = 9/517 (1%)
Query: 180 RSTPVNTSASPSGVSPNIDNNRVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYE 239
RS+ +T+A PS S + RV N IGG FVD + S+ IDVINPATQE+ S VPLTT E
Sbjct: 25 RSSDFSTAAQPSSTSHR-KSLRVPNLIGGTFVDSKSSSAIDVINPATQEIVSHVPLTTNE 83
Query: 240 EFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRD 299
EFK AV AAK AFP+W+NTP+ TRQRIM KLQELIRRDIDKLA+NIT EQG TLK A D
Sbjct: 84 EFKAAVSAAKLAFPSWRNTPITTRQRIMLKLQELIRRDIDKLAVNITCEQGKTLKDAHGD 143
Query: 300 VLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFS 359
V GLEVVE AC +ATLQ+GE+VPN G+DTY REPLGVCAGICPFNFP M PLWMF
Sbjct: 144 VFRGLEVVEHACGMATLQMGEYVPNVSNGIDTYSIREPLGVCAGICPFNFPAMIPLWMFP 203
Query: 360 IAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGTNDVINHICDDEDIKAI 419
+AVTCGNTF+LKPSEK+PG S+ILA LAMEAGLPDGVLNIVHGTND++N ICDD+DI+AI
Sbjct: 204 VAVTCGNTFVLKPSEKDPGASIILAELAMEAGLPDGVLNIVHGTNDIVNAICDDDDIRAI 263
Query: 420 SFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERC 479
SFV S+TA + +Y RA+A+GKRVQSN G KN+ I++PDA++DATLNALV+AGFGAAG+RC
Sbjct: 264 SFVGSNTAGMHIYGRASAKGKRVQSNMGAKNHGIVLPDANMDATLNALVAAGFGAAGQRC 323
Query: 480 TALSTAVFVGSSVQWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDN 539
ALST VFVG S WE++LVE AKALKVN GT+ AD+GPV+S + K+++ RLIQ+ V++
Sbjct: 324 MALSTVVFVGDSQSWENKLVERAKALKVNAGTEPDADLGPVISKQAKERVHRLIQSGVES 383
Query: 540 GASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKM 599
GA LLLDGRNIVVPGYE GNF+GPTIL VT++MECYKEEIFGPVLL MQADS EEAI +
Sbjct: 384 GAKLLLDGRNIVVPGYELGNFIGPTILSGVTADMECYKEEIFGPVLLCMQADSFEEAINI 443
Query: 600 VNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPVPS-----SFSSINES--GEFNF 652
VNRN++ NGA+IFT+SG AARKFQ EIEA VGINVP+P SF+ S G+ NF
Sbjct: 444 VNRNKYGNGAAIFTTSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNF 503
Query: 653 CGKSGVQFYTQIKTVAQQWNDLPK-LGMPLTMPLSSE 688
GK+GV FYTQIKT+ QQW DLP G+ L MP S +
Sbjct: 504 YGKAGVNFYTQIKTITQQWKDLPSGSGVSLAMPTSQK 540
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|118486321|gb|ABK95002.1| unknown [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 720 bits (1858), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/496 (69%), Positives = 408/496 (82%), Gaps = 8/496 (1%)
Query: 201 RVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPV 260
RV N IGGKFVD + S+TIDVINPATQEV SQ+PLTT EEFK AV AAK AFPAW+NTP+
Sbjct: 46 RVPNLIGGKFVDSQSSSTIDVINPATQEVVSQIPLTTNEEFKAAVSAAKHAFPAWRNTPI 105
Query: 261 ATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGE 320
TRQR+M KLQELIRRD DKLAMNIT EQG TLK A DV GLEVVE AC +ATLQ+GE
Sbjct: 106 TTRQRVMLKLQELIRRDTDKLAMNITTEQGKTLKDAHGDVFRGLEVVEHACGMATLQMGE 165
Query: 321 FVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTS 380
+VPN G+DT+ REPLGVCAGICPFNFP M PLWMF +AVTCGNTF+LKPSEK+PG S
Sbjct: 166 YVPNVANGIDTFSIREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGAS 225
Query: 381 MILAALAMEAGLPDGVLNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAARGK 440
+ILA LAMEAGLP+GVLNIVHGTND++N ICDD+DI+AISFV S+TA + +Y+RA+A+GK
Sbjct: 226 IILAELAMEAGLPNGVLNIVHGTNDIVNAICDDDDIRAISFVGSNTAGMHIYSRASAKGK 285
Query: 441 RVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWEDELVE 500
RVQSN G KN+AI++PDA+ DATLNALV+AGFGAAG+RC ALST VFVG S WE++LVE
Sbjct: 286 RVQSNMGAKNHAIVLPDANTDATLNALVAAGFGAAGQRCMALSTVVFVGDSQSWENKLVE 345
Query: 501 LAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNF 560
AK+LKVN GT+ AD+GPV+S + K+++ +LI++ V++GA LLLDGRNIVVPGYE+GNF
Sbjct: 346 CAKSLKVNAGTEPDADLGPVISKQAKERVCKLIESGVESGARLLLDGRNIVVPGYEDGNF 405
Query: 561 VGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAAR 620
+GPTIL VT++M+CYKEEIFGPVLL +ADS EEAI VNRN++ NGA+IFT+SG AAR
Sbjct: 406 IGPTILSGVTADMDCYKEEIFGPVLLCKEADSFEEAIHFVNRNKYGNGAAIFTTSGAAAR 465
Query: 621 KFQNEIEARLVGINVPVPS-----SFSSINES--GEFNFCGKSGVQFYTQIKTVAQQWND 673
KFQ EIEA VGINVP+P SF+ S G+ NF GK+GV FYTQIKT+ QQW D
Sbjct: 466 KFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTITQQWKD 525
Query: 674 LP-KLGMPLTMPLSSE 688
LP G+ L MP S +
Sbjct: 526 LPGGSGVSLAMPTSQK 541
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224103847|ref|XP_002313217.1| predicted protein [Populus trichocarpa] gi|222849625|gb|EEE87172.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 719 bits (1855), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/496 (69%), Positives = 408/496 (82%), Gaps = 8/496 (1%)
Query: 201 RVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPV 260
RV N IGGKFVD + S+TIDVINPATQEV SQ+PLTT EEFK AV AAK AFPAW+NTP+
Sbjct: 1 RVPNLIGGKFVDSQSSSTIDVINPATQEVVSQIPLTTNEEFKAAVSAAKHAFPAWRNTPI 60
Query: 261 ATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGE 320
TRQR+M KLQELIRRD DKLAMNIT EQG TLK A DV GLEVVE AC +ATLQ+GE
Sbjct: 61 TTRQRVMLKLQELIRRDTDKLAMNITTEQGKTLKDAHGDVFRGLEVVEHACGMATLQMGE 120
Query: 321 FVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTS 380
+VPN G+DT+ REPLGVCAGICPFNFP M PLWMF +AVTCGNTF+LKPSEK+PG S
Sbjct: 121 YVPNVANGIDTFSIREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGAS 180
Query: 381 MILAALAMEAGLPDGVLNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAARGK 440
+ILA LAMEAGLP+GVLNIVHGTND++N ICDD+DI+AISFV S+TA + +Y+RA+A+GK
Sbjct: 181 IILAELAMEAGLPNGVLNIVHGTNDIVNAICDDDDIRAISFVGSNTAGMHIYSRASAKGK 240
Query: 441 RVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWEDELVE 500
RVQSN G KN+AI++PDA+ DATLNALV+AGFGAAG+RC ALST VFVG S WE++LVE
Sbjct: 241 RVQSNMGAKNHAIVLPDANTDATLNALVAAGFGAAGQRCMALSTVVFVGDSQSWENKLVE 300
Query: 501 LAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNF 560
AK+LKVN GT+ AD+GPV+S + K+++ +LI++ V++GA LLLDGRNIVVPGYE+GNF
Sbjct: 301 CAKSLKVNAGTEPDADLGPVISKQAKERVCKLIESGVESGARLLLDGRNIVVPGYEDGNF 360
Query: 561 VGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAAR 620
+GPTIL VT++M+CYKEEIFGPVLL +ADS EEAI VNRN++ NGA+IFT+SG AAR
Sbjct: 361 IGPTILSGVTADMDCYKEEIFGPVLLCKEADSFEEAIHFVNRNKYGNGAAIFTTSGAAAR 420
Query: 621 KFQNEIEARLVGINVPVPS-----SFSSINES--GEFNFCGKSGVQFYTQIKTVAQQWND 673
KFQ EIEA VGINVP+P SF+ S G+ NF GK+GV FYTQIKT+ QQW D
Sbjct: 421 KFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTITQQWKD 480
Query: 674 LP-KLGMPLTMPLSSE 688
LP G+ L MP S +
Sbjct: 481 LPGGSGVSLAMPTSQK 496
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1035 | ||||||
| TAIR|locus:2059456 | 607 | ALDH6B2 "AT2G14170" [Arabidops | 0.500 | 0.853 | 0.642 | 3.4e-180 | |
| ZFIN|ZDB-GENE-030131-9192 | 525 | aldh6a1 "aldehyde dehydrogenas | 0.463 | 0.914 | 0.535 | 1.3e-139 | |
| UNIPROTKB|F1S3H1 | 534 | ALDH6A1 "Uncharacterized prote | 0.476 | 0.923 | 0.506 | 5.8e-137 | |
| UNIPROTKB|Q17M80 | 521 | AAEL001134 "Probable methylmal | 0.453 | 0.900 | 0.539 | 4.1e-136 | |
| WB|WBGene00000114 | 523 | alh-8 [Caenorhabditis elegans | 0.466 | 0.923 | 0.533 | 1.1e-135 | |
| UNIPROTKB|P52713 | 523 | alh-8 "Probable methylmalonate | 0.466 | 0.923 | 0.533 | 1.1e-135 | |
| UNIPROTKB|F1N7K8 | 537 | ALDH6A1 "Methylmalonate-semial | 0.486 | 0.938 | 0.497 | 1.8e-135 | |
| UNIPROTKB|J9P2I9 | 533 | ALDH6A1 "Uncharacterized prote | 0.474 | 0.921 | 0.508 | 4.7e-135 | |
| RGD|621556 | 535 | Aldh6a1 "aldehyde dehydrogenas | 0.476 | 0.921 | 0.504 | 6e-135 | |
| MGI|MGI:1915077 | 535 | Aldh6a1 "aldehyde dehydrogenas | 0.476 | 0.921 | 0.5 | 7.7e-135 |
| TAIR|locus:2059456 ALDH6B2 "AT2G14170" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1749 (620.7 bits), Expect = 3.4e-180, P = 3.4e-180
Identities = 342/532 (64%), Positives = 419/532 (78%)
Query: 168 LSEKSFKSWRPN----RSTPVNTSASPSGVSPNIDNNRVSNFIGGKFVDLRGSATIDVIN 223
+S + + RP RS+ ++TS S P + RV N IGG FV+ + S+ IDVIN
Sbjct: 78 ISGNNLRPLRPQFLALRSSWLSTSPEQS-TQPQMPP-RVPNLIGGSFVESQSSSFIDVIN 135
Query: 224 PATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAM 283
PATQEV S+VPLTT EEFK AV AAK+AFP W+NTP+ TRQR+M K QELIR+++DKLAM
Sbjct: 136 PATQEVVSKVPLTTNEEFKAAVSAAKQAFPLWRNTPITTRQRVMLKFQELIRKNMDKLAM 195
Query: 284 NITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAG 343
NIT EQG TLK + D+ GLEVVE AC +ATLQ+GE++PN G+DTY REPLGVCAG
Sbjct: 196 NITTEQGKTLKDSHGDIFRGLEVVEHACGMATLQMGEYLPNVSNGVDTYSIREPLGVCAG 255
Query: 344 ICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGT 403
ICPFNFP M PLWMF +AVTCGNTFILKPSEK+PG S+ILA LAMEAGLPDGVLNIVHGT
Sbjct: 256 ICPFNFPAMIPLWMFPVAVTCGNTFILKPSEKDPGASVILAELAMEAGLPDGVLNIVHGT 315
Query: 404 NDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMPDASIDAT 463
ND +N ICDDEDI+A+SFV S+TA + +YARAAA+GKR+QSN G KN+ +++PDA+IDAT
Sbjct: 316 NDTVNAICDDEDIRAVSFVGSNTAGMHIYARAAAKGKRIQSNMGAKNHGLVLPDANIDAT 375
Query: 464 LNALVSAGFGAAGERCTALSTAVFVGSSVQWEDELVELAKALKVNVGTDASADVGPVVSV 523
LNAL++AGFGAAG+RC ALST VFVG + WED+LVE AKALKV G++ AD+GPV+S
Sbjct: 376 LNALLAAGFGAAGQRCMALSTVVFVGDAKSWEDKLVERAKALKVTCGSEPDADLGPVISK 435
Query: 524 EVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGP 583
+ K++I RLIQ+ VD+GA LLLDGR+IVVPGYE GNF+GPTIL VT +MECYKEEIFGP
Sbjct: 436 QAKERICRLIQSGVDDGAKLLLDGRDIVVPGYEKGNFIGPTILSGVTPDMECYKEEIFGP 495
Query: 584 VLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPVPS---- 639
VL+ MQA+S +EAI ++N+N++ NGA+IFTSSG AARKFQ +IEA +GINVP+P
Sbjct: 496 VLVCMQANSFDEAISIINKNKYGNGAAIFTSSGAAARKFQMDIEAGQIGINVPIPVPLPF 555
Query: 640 -SFSSINES--GEFNFCGKSGVQFYTQIKTVAQQWNDLPKLGMPLTMPLSSE 688
SF+ S G+ NF GK+GV F+TQIKTV QQW D+P + L MP S +
Sbjct: 556 FSFTGNKASFAGDLNFYGKAGVDFFTQIKTVTQQWKDIPT-SVSLAMPTSQK 606
|
|
| ZFIN|ZDB-GENE-030131-9192 aldh6a1 "aldehyde dehydrogenase 6 family, member A1" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 1366 (485.9 bits), Expect = 1.3e-139, P = 1.3e-139
Identities = 262/489 (53%), Positives = 343/489 (70%)
Query: 205 FIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQ 264
FI GKFV+ + S +D+ NPAT EV +VP T EE AVD+ RAF W T + RQ
Sbjct: 33 FIDGKFVESKSSQWLDIHNPATSEVIGRVPKATQEEMLAAVDSCSRAFQTWSETSILARQ 92
Query: 265 RIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVPN 324
+I F+ Q+LI+ +I +LA IT+EQG TL A+ DV GL+VVE C++ +L +GE +P+
Sbjct: 93 QIFFRYQQLIKDNIKELAKLITLEQGKTLADAEGDVFRGLQVVEHTCSITSLMLGETLPS 152
Query: 325 ALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILA 384
+DTY +R P+GVCAGI PFNFP M PLWMF + + CGNT++LKPSE+ PG +M+LA
Sbjct: 153 LTKDMDTYTYRLPIGVCAGIAPFNFPAMIPLWMFPMGMVCGNTYLLKPSERVPGCTMMLA 212
Query: 385 ALAMEAGLPDGVLNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQS 444
L +AG PDG LNI+HG +D +N ICD I+AISFV S+ A +Y R + GKRVQS
Sbjct: 213 KLLQDAGAPDGTLNIIHGQHDAVNFICDHPAIRAISFVGSNQAGEYIYERGSKNGKRVQS 272
Query: 445 NRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWEDELVELAKA 504
N G KN+ +IMPDA+ + TLN LV A FGAAG+RC ALSTA+ VG + W ELVE AK+
Sbjct: 273 NMGAKNHGVIMPDANKENTLNQLVGAAFGAAGQRCMALSTAILVGEARDWLPELVERAKS 332
Query: 505 LKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPT 564
L+VN G ADVGP++S + K++++ LIQ+ VD GA +LLDGRN+ V GYENGNFVGPT
Sbjct: 333 LRVNAGDQPGADVGPLISPQAKERVNSLIQSGVDEGAKVLLDGRNVKVKGYENGNFVGPT 392
Query: 565 ILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQN 624
I+ +VT M CYKEEIFGPVL+ ++ADSL+EAIK+VN+N + NG +IFT++G AARK+ +
Sbjct: 393 IISNVTPEMTCYKEEIFGPVLVVLEADSLDEAIKIVNKNPYGNGTAIFTTNGAAARKYSH 452
Query: 625 EIEARLVGINVPVP---SSFSSINESGEF----NFCGKSGVQFYTQIKTVAQQWN--DLP 675
E++ +G+NVP+P FS G F NF GK G+QFYTQIKT+ QW D
Sbjct: 453 EVDVGQIGVNVPIPVPLPMFSFTGSRGSFRGDTNFYGKQGIQFYTQIKTITSQWKAEDAT 512
Query: 676 KLGMPLTMP 684
+TMP
Sbjct: 513 LKSPAVTMP 521
|
|
| UNIPROTKB|F1S3H1 ALDH6A1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 1341 (477.1 bits), Expect = 5.8e-137, P = 5.8e-137
Identities = 253/500 (50%), Positives = 349/500 (69%)
Query: 181 STPVNTSASPSGVSPNIDNNRVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEE 240
S+ VN+S P+ + V FIGGKF++ + ID+ NPAT E+ +VP T E
Sbjct: 18 SSKVNSSWHPASSFSSSSVPTVKLFIGGKFIESKSDKWIDIHNPATNELIGRVPQATKAE 77
Query: 241 FKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDV 300
AV + KRAFPAW +T + +RQ+++ + Q+LI+ ++ ++A IT+EQG TL A+ DV
Sbjct: 78 MDAAVSSCKRAFPAWADTSILSRQQVLLRYQQLIKENLKEIAKLITLEQGKTLADAEGDV 137
Query: 301 LFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSI 360
GL+VVE AC+V +L +GE +P+ +D Y +R PLGVCAGI PFNFP M PLWMF +
Sbjct: 138 FRGLQVVEHACSVTSLMLGETMPSITKDMDLYSYRLPLGVCAGIAPFNFPAMIPLWMFPM 197
Query: 361 AVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGTNDVINHICDDEDIKAIS 420
A+ CGNTF++KPSE+ PG +M+LA L ++G PDG LN++HG ++ +N ICD DIKAIS
Sbjct: 198 AMVCGNTFLMKPSERVPGATMLLAKLLQDSGAPDGTLNVIHGQHEAVNFICDHPDIKAIS 257
Query: 421 FVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCT 480
FV S+ A ++ R + GKRVQ+N G KN+ ++MPDA+ + TLN LV A FGAAG+RC
Sbjct: 258 FVGSNQAGEYIFERGSRHGKRVQANMGAKNHGVVMPDANKENTLNQLVGAAFGAAGQRCM 317
Query: 481 ALSTAVFVGSSVQWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNG 540
ALSTA+ VG + +W ELVE AK L+VN G AD+GP++S + K+++ LI + G
Sbjct: 318 ALSTAILVGEAKKWLPELVERAKNLRVNAGDQPGADLGPLISPQAKERVCNLIDSGTKEG 377
Query: 541 ASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMV 600
AS+LLDGRNI V GYENGNFVGPTI+ +V NM CYKEEIFGPVL+ ++ D+L+EAIK+V
Sbjct: 378 ASILLDGRNIKVKGYENGNFVGPTIISNVKPNMTCYKEEIFGPVLVVLETDTLDEAIKIV 437
Query: 601 NRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPVPS-----SFSSINES--GEFNFC 653
N N + NG +IFT++G ARK+ + ++ VG+NVP+P SF+ S G+ NF
Sbjct: 438 NDNPYGNGTAIFTTNGATARKYSHLVDVGQVGVNVPIPVPLPMFSFTGSRSSFRGDTNFY 497
Query: 654 GKSGVQFYTQIKTVAQQWND 673
GK G+QFYTQ+KT+ QW +
Sbjct: 498 GKQGIQFYTQLKTITSQWKE 517
|
|
| UNIPROTKB|Q17M80 AAEL001134 "Probable methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial" [Aedes aegypti (taxid:7159)] | Back alignment and assigned GO terms |
|---|
Score = 1333 (474.3 bits), Expect = 4.1e-136, P = 4.1e-136
Identities = 257/476 (53%), Positives = 337/476 (70%)
Query: 205 FIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQ 264
FI GKFVD + + ID+ +PAT +V ++VP T +E + AV+++K+AF W T + RQ
Sbjct: 30 FIDGKFVDSKTTEWIDLHDPATNKVVTRVPKCTQDEMESAVESSKKAFKTWSQTSILGRQ 89
Query: 265 RIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVPN 324
++MFKLQ LIR ++ +LA NIT EQG TL A+ DVL GL+VVE C++ +LQ+GE VPN
Sbjct: 90 QVMFKLQHLIRNNMSELAKNITKEQGKTLVDAEGDVLRGLQVVEHCCSITSLQMGETVPN 149
Query: 325 ALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILA 384
+DTY + PLGV AGICPFNFP M PLWMF +A+TCGNT I+KPSE+ PG +M+L
Sbjct: 150 IAKDMDTYSYTLPLGVTAGICPFNFPAMIPLWMFPVAITCGNTSIIKPSERVPGATMMLM 209
Query: 385 ALAMEAGLPDGVLNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQS 444
L EAG P GV+N++HG +D +N ICD+ IKA+SFV S A +Y RA GKRVQS
Sbjct: 210 ELLNEAGCPPGVVNVIHGAHDAVNFICDNPTIKAVSFVGSDQAGKYIYERAGRNGKRVQS 269
Query: 445 NRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWEDELVELAKA 504
N G KN+ +IM DA+ + TLN L A FGAAG+RC ALSTAVFVG + QW +LVE A+
Sbjct: 270 NMGAKNHGVIMADANKENTLNQLAGAAFGAAGQRCMALSTAVFVGEAKQWIPDLVERARK 329
Query: 505 LKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPT 564
LKVN G DVGPV+S + K +I+ L+++ V GA L+LDGR+I V +ENGNFVGPT
Sbjct: 330 LKVNAGHVPGTDVGPVISPQSKQRINELVESGVKEGAKLVLDGRSIKVENFENGNFVGPT 389
Query: 565 ILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQN 624
IL DV++NM+CY EEIFGPVL+ + D+++EA++M+N N + NG +IFT++G ARKF N
Sbjct: 390 ILTDVSTNMKCYTEEIFGPVLVCLTVDTVDEAVEMINNNPYGNGTAIFTTNGATARKFVN 449
Query: 625 EIEARLVGINVPVP---SSFSSINESGEF----NFCGKSGVQFYTQIKTVAQQWND 673
EI+ VG+NVP+P FS G F +F GK GV+FYTQ KTV Q W +
Sbjct: 450 EIDVGQVGVNVPIPVPLPMFSFTGSRGSFMGDCHFYGKQGVKFYTQTKTVTQLWRE 505
|
|
| WB|WBGene00000114 alh-8 [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
|---|
Score = 1329 (472.9 bits), Expect = 1.1e-135, P = 1.1e-135
Identities = 262/491 (53%), Positives = 343/491 (69%)
Query: 202 VSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVA 261
V +I G+ V+ + + +++ NPAT EV + VP T E + AVD+AK AF WKNT
Sbjct: 30 VKLWIDGQAVESKTTDFVELTNPATNEVIAMVPNATQAEMQAAVDSAKNAFNTWKNTSPL 89
Query: 262 TRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEF 321
TRQ+ MFKLQ LI+RD+ KLA +IT+EQG TL A+ DV GL+VVE AC+V +L +GE
Sbjct: 90 TRQQCMFKLQALIKRDMKKLAESITIEQGKTLPDAEGDVSRGLQVVEHACSVPSLMMGET 149
Query: 322 VPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSM 381
+PN +DT+ +R PLGV AGICPFNFP M PLWMF +A+ GNT ++KPSE++PG +
Sbjct: 150 LPNVSRDMDTHSYRIPLGVTAGICPFNFPAMIPLWMFPVALATGNTMVIKPSEQDPGAAQ 209
Query: 382 ILAALAMEAGLPDGVLNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAARGKR 441
+L LA EAG+PDG +NI+HG + +N ICD+ DIKAISFV A +Y R A GKR
Sbjct: 210 LLVELAKEAGVPDGCVNIIHGQHSAVNFICDNPDIKAISFVGGDAAGKHIYERGAKNGKR 269
Query: 442 VQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWEDELVEL 501
VQSN G KN+ +IM DA+ + TLN L +A FGAAG+RC AL+TAV VG + W ELVE
Sbjct: 270 VQSNMGAKNHGVIMADANKEQTLNQLTAAAFGAAGQRCMALTTAVLVGEARAWLPELVEK 329
Query: 502 AKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFV 561
AK LKVN G D+GP++S + K ++ RLI++A GA + LDG NI VPG+ENGNFV
Sbjct: 330 AKNLKVNAGWKPDTDIGPLISKQSKARVLRLIESAKKEGAQVPLDGSNITVPGFENGNFV 389
Query: 562 GPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARK 621
GPTIL V NM CY+EEIFGPVL+ M+A++L EAI+++N N + NG +IFTS+G ARK
Sbjct: 390 GPTILAGVKPNMTCYREEIFGPVLVVMEAENLNEAIEIINNNPYGNGTAIFTSNGATARK 449
Query: 622 FQNEIEARLVGINVPVPS-----SFSSINES--GEFNFCGKSGVQFYTQIKTVAQQWND- 673
F NE++ +GINVP+P SF+ S G+ NF GK+G+QFYTQ KTV Q WN+
Sbjct: 450 FTNEVDVGQIGINVPIPVPLPMFSFTGSRGSFLGDLNFYGKAGIQFYTQWKTVTQYWNES 509
Query: 674 LPKLGMPLTMP 684
L +L ++ P
Sbjct: 510 LTELKPQMSFP 520
|
|
| UNIPROTKB|P52713 alh-8 "Probable methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial" [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
|---|
Score = 1329 (472.9 bits), Expect = 1.1e-135, P = 1.1e-135
Identities = 262/491 (53%), Positives = 343/491 (69%)
Query: 202 VSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVA 261
V +I G+ V+ + + +++ NPAT EV + VP T E + AVD+AK AF WKNT
Sbjct: 30 VKLWIDGQAVESKTTDFVELTNPATNEVIAMVPNATQAEMQAAVDSAKNAFNTWKNTSPL 89
Query: 262 TRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEF 321
TRQ+ MFKLQ LI+RD+ KLA +IT+EQG TL A+ DV GL+VVE AC+V +L +GE
Sbjct: 90 TRQQCMFKLQALIKRDMKKLAESITIEQGKTLPDAEGDVSRGLQVVEHACSVPSLMMGET 149
Query: 322 VPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSM 381
+PN +DT+ +R PLGV AGICPFNFP M PLWMF +A+ GNT ++KPSE++PG +
Sbjct: 150 LPNVSRDMDTHSYRIPLGVTAGICPFNFPAMIPLWMFPVALATGNTMVIKPSEQDPGAAQ 209
Query: 382 ILAALAMEAGLPDGVLNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAARGKR 441
+L LA EAG+PDG +NI+HG + +N ICD+ DIKAISFV A +Y R A GKR
Sbjct: 210 LLVELAKEAGVPDGCVNIIHGQHSAVNFICDNPDIKAISFVGGDAAGKHIYERGAKNGKR 269
Query: 442 VQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWEDELVEL 501
VQSN G KN+ +IM DA+ + TLN L +A FGAAG+RC AL+TAV VG + W ELVE
Sbjct: 270 VQSNMGAKNHGVIMADANKEQTLNQLTAAAFGAAGQRCMALTTAVLVGEARAWLPELVEK 329
Query: 502 AKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFV 561
AK LKVN G D+GP++S + K ++ RLI++A GA + LDG NI VPG+ENGNFV
Sbjct: 330 AKNLKVNAGWKPDTDIGPLISKQSKARVLRLIESAKKEGAQVPLDGSNITVPGFENGNFV 389
Query: 562 GPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARK 621
GPTIL V NM CY+EEIFGPVL+ M+A++L EAI+++N N + NG +IFTS+G ARK
Sbjct: 390 GPTILAGVKPNMTCYREEIFGPVLVVMEAENLNEAIEIINNNPYGNGTAIFTSNGATARK 449
Query: 622 FQNEIEARLVGINVPVPS-----SFSSINES--GEFNFCGKSGVQFYTQIKTVAQQWND- 673
F NE++ +GINVP+P SF+ S G+ NF GK+G+QFYTQ KTV Q WN+
Sbjct: 450 FTNEVDVGQIGINVPIPVPLPMFSFTGSRGSFLGDLNFYGKAGIQFYTQWKTVTQYWNES 509
Query: 674 LPKLGMPLTMP 684
L +L ++ P
Sbjct: 510 LTELKPQMSFP 520
|
|
| UNIPROTKB|F1N7K8 ALDH6A1 "Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 1327 (472.2 bits), Expect = 1.8e-135, P = 1.8e-135
Identities = 255/513 (49%), Positives = 353/513 (68%)
Query: 181 STPVNTSASPSGVSPNIDNNRVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEE 240
S+ VN+S P+ + V FI GKF++ + ID+ NPAT EV +VP +T E
Sbjct: 21 SSKVNSSWQPASSFSSSSVPTVKLFIDGKFIESKSDKWIDIHNPATNEVIGRVPESTKAE 80
Query: 241 FKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDV 300
AV + KR FPAW +T + +RQ+++ + Q+LI+ ++ ++A IT+EQG TL A+ DV
Sbjct: 81 MDAAVSSCKRTFPAWADTSILSRQQVLLRYQQLIKENLKEIARLITLEQGKTLADAEGDV 140
Query: 301 LFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSI 360
GL+VVE AC+V +L +GE +P+ +D Y +R PLGVCAGI PFNFP M PLWMF +
Sbjct: 141 FRGLQVVEHACSVTSLMLGETMPSITKDMDLYSYRLPLGVCAGIAPFNFPAMIPLWMFPM 200
Query: 361 AVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGTNDVINHICDDEDIKAIS 420
A+ CGNTF++KPSE+ PG +M+LA L ++G PDG LNI+HG ++ +N ICD DIKAIS
Sbjct: 201 AMVCGNTFLMKPSERVPGATMLLAKLFQDSGAPDGTLNIIHGQHEAVNFICDHPDIKAIS 260
Query: 421 FVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCT 480
FV S+ A ++ R + GKRVQ+N G KN+ ++MPDA+ + TLN LV A FGAAG+RC
Sbjct: 261 FVGSNQAGEYIFERGSRHGKRVQANMGAKNHGVVMPDANKENTLNQLVGAAFGAAGQRCM 320
Query: 481 ALSTAVFVGSSVQWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNG 540
ALSTA+ VG + +W ELVE AK L+VN G AD+GP+++ + K+++ LI + G
Sbjct: 321 ALSTAILVGEAKKWLPELVERAKKLRVNAGDQPGADLGPLITPQAKERVCNLIDSGTKEG 380
Query: 541 ASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMV 600
AS+LLDGR+I V GYENGNFVGPTI+ +V NM CYKEEIFGPVL+ ++ D+L+EAIK+V
Sbjct: 381 ASILLDGRSIKVKGYENGNFVGPTIISNVKPNMTCYKEEIFGPVLVVLETDTLDEAIKIV 440
Query: 601 NRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPVPS-----SFSSINES--GEFNFC 653
N N + NG +IFT++G ARK+ + ++ VG+NVP+P SF+ S G+ NF
Sbjct: 441 NDNPYGNGTAIFTTNGATARKYSHLVDVGQVGVNVPIPVPLPMFSFTGSRASFRGDTNFY 500
Query: 654 GKSGVQFYTQIKTVAQQWNDLP-KLGMP-LTMP 684
GK G+QFYTQ+KT+ QW + L P + MP
Sbjct: 501 GKQGIQFYTQLKTITSQWKEEDASLSSPAVVMP 533
|
|
| UNIPROTKB|J9P2I9 ALDH6A1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 1323 (470.8 bits), Expect = 4.7e-135, P = 4.7e-135
Identities = 255/501 (50%), Positives = 348/501 (69%)
Query: 181 STPVNTSASPS-GVSPNIDNNRVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYE 239
S+ VN++ P+ S ++ V FI GKFV+ + ID+ NPAT EV +VP T
Sbjct: 18 SSKVNSTWYPAYSFSSSVPT--VKLFIDGKFVESKSDKWIDIHNPATNEVIGRVPQATKA 75
Query: 240 EFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRD 299
E AV + KRAFPAW +T V +RQ+++ + Q+LI+ ++ ++A IT+EQG TL A+ D
Sbjct: 76 EMDAAVTSCKRAFPAWADTSVLSRQQVLLRYQQLIKENLKEIAKLITLEQGKTLADAEGD 135
Query: 300 VLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFS 359
V GL+VVE AC+V +L +GE +P+ +D Y +R PLGVCAGI PFNFP M PLWMF
Sbjct: 136 VFRGLQVVEHACSVTSLMLGETMPSITKDMDLYSYRLPLGVCAGIAPFNFPAMIPLWMFP 195
Query: 360 IAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGTNDVINHICDDEDIKAI 419
+A+ CGNTF++KPSE+ PG SM+LA L ++G PDG LNI+HG ++ +N ICD DIKAI
Sbjct: 196 MAMVCGNTFLMKPSERVPGASMLLAKLLQDSGAPDGTLNIIHGQHEAVNFICDHPDIKAI 255
Query: 420 SFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERC 479
SFV S+ A ++ R + GKRVQ+N G KN+ ++MPDA+ + TLN LV A FGAAG+RC
Sbjct: 256 SFVGSNQAGEYIFERGSRHGKRVQANMGAKNHGVVMPDANKENTLNQLVGAAFGAAGQRC 315
Query: 480 TALSTAVFVGSSVQWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDN 539
ALSTA+ VG + +W ELVE AK L+VN G AD+GP+++ + K+++ LI +
Sbjct: 316 MALSTAILVGEAKKWLPELVERAKNLRVNAGDQPGADLGPLITPQAKERVCNLIDSGTKE 375
Query: 540 GASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKM 599
GAS+LLDGR I V GYENGNFVGPTI+ +V M CYKEEIFGPVL+ ++ D+L+EAIK+
Sbjct: 376 GASILLDGRKIKVKGYENGNFVGPTIISNVKPTMTCYKEEIFGPVLVVLETDTLDEAIKI 435
Query: 600 VNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPVPS-----SFSSINES--GEFNF 652
VN N + NG +IFT++G ARK+ + ++ VG+NVP+P SF+ S G+ NF
Sbjct: 436 VNSNPYGNGTAIFTTNGATARKYSHLVDVGQVGVNVPIPVPLPMFSFTGSRSSFRGDTNF 495
Query: 653 CGKSGVQFYTQIKTVAQQWND 673
GK G+QFYTQIKT+ QW +
Sbjct: 496 YGKQGIQFYTQIKTITSQWKE 516
|
|
| RGD|621556 Aldh6a1 "aldehyde dehydrogenase 6 family, member A1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 1322 (470.4 bits), Expect = 6.0e-135, P = 6.0e-135
Identities = 252/500 (50%), Positives = 349/500 (69%)
Query: 181 STPVNTSASPSGVSPNIDNNRVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEE 240
S+ VN++ P+ + V FI GKFV+ + ID+ NPAT EV +VP +T E
Sbjct: 19 SSKVNSTWYPASSFSSSSVPTVKLFIDGKFVESKSDKWIDIHNPATNEVVGRVPQSTKAE 78
Query: 241 FKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDV 300
+ AV A KRAFPAW +T + +RQ+++ + Q+LI+ ++ ++A IT+EQG TL A+ DV
Sbjct: 79 MEAAVAACKRAFPAWADTSILSRQQVLLRYQQLIKENLKEIARLITLEQGKTLADAEGDV 138
Query: 301 LFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSI 360
GL+VVE AC+V +L +GE +P+ +D Y +R PLGVCAGI PFNFP M PLWMF +
Sbjct: 139 FRGLQVVEHACSVTSLMLGETMPSITKDMDLYSYRLPLGVCAGIAPFNFPAMIPLWMFPM 198
Query: 361 AVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGTNDVINHICDDEDIKAIS 420
A+ CGNTF++KPSE+ PG +M+LA L ++G PDG LNI+HG ++ +N ICD DIKAIS
Sbjct: 199 AMVCGNTFLMKPSERVPGATMLLAKLLQDSGAPDGTLNIIHGQHEAVNFICDHPDIKAIS 258
Query: 421 FVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCT 480
FV S+ A ++ R + GKRVQ+N G KN+ ++MPDA+ + TLN LV A FGAAG+RC
Sbjct: 259 FVGSNQAGEYIFERGSRNGKRVQANMGAKNHGVVMPDANKENTLNQLVGAAFGAAGQRCM 318
Query: 481 ALSTAVFVGSSVQWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNG 540
ALSTAV VG + +W ELVE AK L+VN G AD+GP+++ + K+++ LI + G
Sbjct: 319 ALSTAVLVGEAKKWLPELVERAKNLRVNAGDQPGADLGPLITPQAKERVCNLIDSGAKEG 378
Query: 541 ASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMV 600
AS+LLDGR I V GYENGNFVGPTI+ +V +M CYKEEIFGPVL+ ++ ++L+EAIK+V
Sbjct: 379 ASILLDGRKIKVKGYENGNFVGPTIISNVKPSMTCYKEEIFGPVLVVLETETLDEAIKIV 438
Query: 601 NRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPVPS-----SFSSINES--GEFNFC 653
N N + NG +IFT++G ARK+ + ++ VG+NVP+P SF+ S G+ NF
Sbjct: 439 NDNPYGNGTAIFTTNGAIARKYAHMVDVGQVGVNVPIPVPLPMFSFTGSRSSFRGDTNFY 498
Query: 654 GKSGVQFYTQIKTVAQQWND 673
GK G+QFYTQ+KT+ QW +
Sbjct: 499 GKQGIQFYTQLKTITSQWKE 518
|
|
| MGI|MGI:1915077 Aldh6a1 "aldehyde dehydrogenase family 6, subfamily A1" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 1321 (470.1 bits), Expect = 7.7e-135, P = 7.7e-135
Identities = 250/500 (50%), Positives = 348/500 (69%)
Query: 181 STPVNTSASPSGVSPNIDNNRVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEE 240
S+ VN + P+ + V FI GKFV+ + ID+ NPAT EV +VP +T E
Sbjct: 19 SSKVNATWYPASSFSSSSVPTVKLFIDGKFVESKSDKWIDIHNPATNEVVGRVPQSTKAE 78
Query: 241 FKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDV 300
AV++ KRAFPAW +T + +RQ+++ + Q+LI+ ++ ++A IT+EQG TL A+ DV
Sbjct: 79 MDAAVESCKRAFPAWADTSILSRQQVLLRYQQLIKENLKEIARLITLEQGKTLADAEGDV 138
Query: 301 LFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSI 360
GL+VVE AC+V +L +GE +P+ +D Y +R PLGVCAGI PFNFP M PLWMF +
Sbjct: 139 FRGLQVVEHACSVTSLMLGETMPSITKDMDLYSYRLPLGVCAGIAPFNFPAMIPLWMFPM 198
Query: 361 AVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGTNDVINHICDDEDIKAIS 420
A+ CGNTF++KPSE+ PG +M+LA L ++G PDG LNI+HG +D +N ICD DIKAIS
Sbjct: 199 AMVCGNTFLMKPSERVPGATMLLAKLLQDSGAPDGTLNIIHGQHDAVNFICDHPDIKAIS 258
Query: 421 FVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCT 480
FV S+ A ++ R + GKRVQ+N G KN+ ++MPDA+ + TLN LV A FGAAG+RC
Sbjct: 259 FVGSNQAGEYIFERGSRNGKRVQANMGAKNHGVVMPDANKENTLNQLVGAAFGAAGQRCM 318
Query: 481 ALSTAVFVGSSVQWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNG 540
ALSTA+ VG + +W ELV+ AK L+VN G AD+GP+++ + K+++ LI + G
Sbjct: 319 ALSTAILVGEAKKWLPELVDRAKNLRVNAGDQPGADLGPLITPQAKERVCNLIDSGTKEG 378
Query: 541 ASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMV 600
AS+LLDGR I V GYENGNFVGPTI+ +V +M CYKEEIFGPVL+ ++ ++L+EAIK+V
Sbjct: 379 ASILLDGRRIKVKGYENGNFVGPTIISNVKPSMTCYKEEIFGPVLVVLETETLDEAIKIV 438
Query: 601 NRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPVPS-----SFSSINES--GEFNFC 653
N N + NG +IFT++G ARK+ + ++ VG+NVP+P SF+ S G+ NF
Sbjct: 439 NDNPYGNGTAIFTTNGATARKYAHMVDVGQVGVNVPIPVPLPMFSFTGSRSSFRGDTNFY 498
Query: 654 GKSGVQFYTQIKTVAQQWND 673
GK G+QFYTQ+KT+ QW +
Sbjct: 499 GKQGIQFYTQLKTITSQWKE 518
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| GSVIVG00011632001 | SubName- Full=Chromosome undetermined scaffold_324, whole genome shotgun sequence; (1078 aa) | ||||||||||
(Vitis vinifera) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 1035 | |||
| cd07085 | 478 | cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyd | 0.0 | |
| PLN02419 | 604 | PLN02419, PLN02419, methylmalonate-semialdehyde de | 0.0 | |
| TIGR01722 | 477 | TIGR01722, MMSDH, methylmalonic acid semialdehyde | 0.0 | |
| pfam00171 | 459 | pfam00171, Aldedh, Aldehyde dehydrogenase family | 1e-143 | |
| COG1012 | 472 | COG1012, PutA, NAD-dependent aldehyde dehydrogenas | 1e-132 | |
| cd07078 | 432 | cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrog | 1e-110 | |
| cd07097 | 473 | cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+ | 1e-105 | |
| cd07103 | 451 | cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succina | 1e-102 | |
| cd07131 | 478 | cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candi | 1e-101 | |
| cd07088 | 468 | cd07088, ALDH_LactADH-AldA, Escherichia coli lacta | 4e-98 | |
| cd07093 | 455 | cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogen | 1e-90 | |
| cd07086 | 478 | cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha | 7e-90 | |
| cd07091 | 476 | cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH | 3e-85 | |
| cd07150 | 451 | cd07150, ALDH_VaniDH_like, Pseudomonas putida vani | 5e-85 | |
| cd07138 | 466 | cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-ox | 2e-83 | |
| cd07114 | 457 | cd07114, ALDH_DhaS, Uncharacterized Candidatus pel | 1e-82 | |
| cd07106 | 446 | cd07106, ALDH_AldA-AAD23400, Streptomyces aureofac | 4e-81 | |
| cd07104 | 431 | cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P) | 5e-80 | |
| cd07119 | 482 | cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-de | 5e-79 | |
| cd07090 | 457 | cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethy | 6e-79 | |
| cd07124 | 512 | cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline- | 2e-78 | |
| PRK13252 | 488 | PRK13252, PRK13252, betaine aldehyde dehydrogenase | 3e-78 | |
| TIGR01804 | 467 | TIGR01804, BADH, glycine betaine aldehyde dehydrog | 5e-78 | |
| cd07139 | 471 | cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculo | 7e-78 | |
| PLN02278 | 498 | PLN02278, PLN02278, succinic semialdehyde dehydrog | 2e-76 | |
| TIGR02299 | 488 | TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate | 6e-76 | |
| cd07145 | 456 | cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcu | 7e-76 | |
| cd07149 | 453 | cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) wi | 2e-74 | |
| cd07094 | 453 | cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NA | 5e-73 | |
| cd07118 | 454 | cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbos | 1e-72 | |
| cd07109 | 454 | cd07109, ALDH_AAS00426, Uncharacterized Saccharopo | 2e-72 | |
| cd07115 | 453 | cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens | 3e-72 | |
| cd07113 | 477 | cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dep | 4e-72 | |
| TIGR01780 | 448 | TIGR01780, SSADH, succinate-semialdehyde dehydroge | 3e-71 | |
| cd07092 | 450 | cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-d | 3e-71 | |
| cd07105 | 432 | cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogena | 6e-71 | |
| cd07144 | 484 | cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisi | 9e-71 | |
| cd07082 | 473 | cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-ph | 2e-70 | |
| cd07089 | 459 | cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6- | 2e-69 | |
| cd07100 | 429 | cd07100, ALDH_SSADH1_GabD1, Mycobacterium tubercul | 1e-68 | |
| cd07147 | 452 | cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase f | 2e-68 | |
| cd07112 | 462 | cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+ | 4e-68 | |
| cd07102 | 452 | cd07102, ALDH_EDX86601, Uncharacterized aldehyde d | 6e-68 | |
| cd07099 | 453 | cd07099, ALDH_DDALDH, Methylomonas sp | 1e-67 | |
| cd07110 | 456 | cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehy | 4e-67 | |
| cd07141 | 481 | cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retin | 2e-66 | |
| PRK13473 | 475 | PRK13473, PRK13473, gamma-aminobutyraldehyde dehyd | 2e-66 | |
| cd07143 | 481 | cd07143, ALDH_AldA_AN0554, Aspergillus nidulans al | 8e-66 | |
| cd06534 | 367 | cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehyd | 2e-65 | |
| cd07151 | 465 | cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxyb | 8e-65 | |
| cd07142 | 476 | cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogen | 3e-64 | |
| cd07107 | 456 | cd07107, ALDH_PhdK-like, Nocardioides 2-carboxyben | 4e-64 | |
| cd07108 | 457 | cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-d | 6e-62 | |
| cd07140 | 486 | cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate | 5e-61 | |
| cd07559 | 480 | cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophu | 6e-61 | |
| PRK03137 | 514 | PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehy | 4e-60 | |
| cd07152 | 443 | cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde | 1e-57 | |
| cd07146 | 451 | cd07146, ALDH_PhpJ, Streptomyces putative phosphon | 2e-57 | |
| PRK11241 | 482 | PRK11241, gabD, succinate-semialdehyde dehydrogena | 1e-56 | |
| cd07117 | 475 | cd07117, ALDH_StaphAldA1, Uncharacterized Staphylo | 2e-56 | |
| TIGR03216 | 481 | TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semia | 3e-56 | |
| PLN02766 | 501 | PLN02766, PLN02766, coniferyl-aldehyde dehydrogena | 3e-56 | |
| PRK10090 | 409 | PRK10090, PRK10090, aldehyde dehydrogenase A; Prov | 4e-55 | |
| TIGR01237 | 511 | TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carb | 3e-54 | |
| cd07095 | 431 | cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-sem | 9e-54 | |
| PRK09847 | 494 | PRK09847, PRK09847, gamma-glutamyl-gamma-aminobuty | 2e-53 | |
| cd07098 | 465 | cd07098, ALDH_F15-22, Aldehyde dehydrogenase famil | 1e-52 | |
| PRK09407 | 524 | PRK09407, gabD2, succinic semialdehyde dehydrogena | 6e-52 | |
| PLN02466 | 538 | PLN02466, PLN02466, aldehyde dehydrogenase family | 8e-52 | |
| PLN02467 | 503 | PLN02467, PLN02467, betaine aldehyde dehydrogenase | 1e-51 | |
| cd07130 | 474 | cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-amin | 2e-51 | |
| cd07111 | 480 | cd07111, ALDH_F16, Aldehyde dehydrogenase family 1 | 2e-51 | |
| cd07120 | 455 | cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida al | 3e-51 | |
| cd07101 | 454 | cd07101, ALDH_SSADH2_GabD2, Mycobacterium tubercul | 3e-49 | |
| cd07116 | 479 | cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD | 7e-48 | |
| PRK13968 | 462 | PRK13968, PRK13968, putative succinate semialdehyd | 8e-47 | |
| PRK09406 | 457 | PRK09406, gabD1, succinic semialdehyde dehydrogena | 7e-46 | |
| PRK09457 | 487 | PRK09457, astD, succinylglutamic semialdehyde dehy | 6e-44 | |
| TIGR03240 | 484 | TIGR03240, arg_catab_astD, succinylglutamic semial | 1e-42 | |
| TIGR03374 | 472 | TIGR03374, ABALDH, 1-pyrroline dehydrogenase | 2e-42 | |
| cd07083 | 500 | cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent | 4e-42 | |
| PLN00412 | 496 | PLN00412, PLN00412, NADP-dependent glyceraldehyde- | 1e-40 | |
| TIGR04284 | 480 | TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, | 2e-40 | |
| cd07125 | 518 | cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-car | 5e-40 | |
| TIGR03250 | 472 | TIGR03250, PhnAcAld_DH, putative phosphonoacetalde | 1e-39 | |
| cd07148 | 455 | cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL031 | 8e-36 | |
| PLN02315 | 508 | PLN02315, PLN02315, aldehyde dehydrogenase family | 8e-35 | |
| COG4230 | 769 | COG4230, COG4230, Delta 1-pyrroline-5-carboxylate | 5e-33 | |
| cd07123 | 522 | cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-ca | 5e-32 | |
| PRK11904 | 1038 | PRK11904, PRK11904, bifunctional proline dehydroge | 2e-31 | |
| cd07087 | 426 | cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily: | 2e-30 | |
| TIGR01238 | 500 | TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carb | 5e-30 | |
| cd07134 | 433 | cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehy | 2e-29 | |
| TIGR01236 | 532 | TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carb | 7e-29 | |
| PRK11905 | 1208 | PRK11905, PRK11905, bifunctional proline dehydroge | 8e-28 | |
| cd07135 | 436 | cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisia | 4e-26 | |
| PTZ00381 | 493 | PTZ00381, PTZ00381, aldehyde dehydrogenase family | 4e-24 | |
| cd07136 | 449 | cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldeh | 2e-23 | |
| PRK11809 | 1318 | PRK11809, putA, trifunctional transcriptional regu | 7e-22 | |
| cd07132 | 443 | cd07132, ALDH_F3AB, Aldehyde dehydrogenase family | 1e-19 | |
| cd07133 | 434 | cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehyd | 3e-19 | |
| TIGR02278 | 663 | TIGR02278, PaaN-DH, phenylacetic acid degradation | 1e-17 | |
| cd06534 | 367 | cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehyd | 4e-17 | |
| cd07128 | 513 | cd07128, ALDH_MaoC-N, N-terminal domain of the mon | 5e-17 | |
| cd07084 | 442 | cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+ | 4e-16 | |
| cd07137 | 432 | cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase | 1e-14 | |
| PLN02174 | 484 | PLN02174, PLN02174, aldehyde dehydrogenase family | 2e-14 | |
| PRK11903 | 521 | PRK11903, PRK11903, aldehyde dehydrogenase; Provis | 2e-13 | |
| PRK11563 | 675 | PRK11563, PRK11563, bifunctional aldehyde dehydrog | 5e-13 | |
| PLN02203 | 484 | PLN02203, PLN02203, aldehyde dehydrogenase | 4e-10 | |
| cd07129 | 454 | cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdeh | 2e-09 | |
| cd07126 | 489 | cd07126, ALDH_F12_P5CDH, Delta(1)-pyrroline-5-carb | 1e-08 | |
| cd07127 | 549 | cd07127, ALDH_PAD-PaaZ, Phenylacetic acid degradat | 7e-07 | |
| cd07077 | 397 | cd07077, ALDH-like, NAD(P)+-dependent aldehyde deh | 7e-06 | |
| pfam03101 | 90 | pfam03101, FAR1, FAR1 DNA-binding domain | 2e-04 | |
| TIGR02288 | 551 | TIGR02288, PaaN_2, phenylacetic acid degradation p | 9e-04 | |
| pfam08731 | 90 | pfam08731, AFT, Transcription factor AFT | 0.001 |
| >gnl|CDD|143404 cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2 | Back alignment and domain information |
|---|
Score = 727 bits (1878), Expect = 0.0
Identities = 267/478 (55%), Positives = 342/478 (71%), Gaps = 8/478 (1%)
Query: 202 VSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVA 261
+ FI G++V+ + + +DV NPAT EV ++VPL T EE AV AAK AFPAW TPV
Sbjct: 1 LKLFINGEWVESKTTEWLDVYNPATGEVIARVPLATAEEVDAAVAAAKAAFPAWSATPVL 60
Query: 262 TRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEF 321
RQ++MFK ++L+ ++D+LA IT+E G TL A+ DVL GLEVVE AC++ L GE+
Sbjct: 61 KRQQVMFKFRQLLEENLDELARLITLEHGKTLADARGDVLRGLEVVEFACSIPHLLKGEY 120
Query: 322 VPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSM 381
+ N G+DTY +R+PLGV AGI PFNFP M PLWMF +A+ CGNTF+LKPSE+ PG +M
Sbjct: 121 LENVARGIDTYSYRQPLGVVAGITPFNFPAMIPLWMFPMAIACGNTFVLKPSERVPGAAM 180
Query: 382 ILAALAMEAGLPDGVLNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAARGKR 441
LA L EAGLPDGVLN+VHG + +N + D DIKA+SFV S+ +Y RAAA GKR
Sbjct: 181 RLAELLQEAGLPDGVLNVVHGGKEAVNALLDHPDIKAVSFVGSTPVGEYIYERAAANGKR 240
Query: 442 VQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVE 500
VQ+ G KN+A++MPDA ++ T NALV A FGAAG+RC ALS AV VG +W +LVE
Sbjct: 241 VQALGGAKNHAVVMPDADLEQTANALVGAAFGAAGQRCMALSVAVAVGDEADEWIPKLVE 300
Query: 501 LAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNF 560
AK LKV G D AD+GPV+S K++I LI++ V+ GA L+LDGR + VPGYENGNF
Sbjct: 301 RAKKLKVGAGDDPGADMGPVISPAAKERIEGLIESGVEEGAKLVLDGRGVKVPGYENGNF 360
Query: 561 VGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAAR 620
VGPTIL +VT +M+ YKEEIFGPVL ++ D+L+EAI ++N N + NGA+IFT SG AAR
Sbjct: 361 VGPTILDNVTPDMKIYKEEIFGPVLSIVRVDTLDEAIAIINANPYGNGAAIFTRSGAAAR 420
Query: 621 KFQNEIEARLVGINVPVPS-----SFSSINES--GEFNFCGKSGVQFYTQIKTVAQQW 671
KFQ E++A +VGINVP+P SF S G+ +F GK GV+FYTQ KTV +W
Sbjct: 421 KFQREVDAGMVGINVPIPVPLAFFSFGGWKGSFFGDLHFYGKDGVRFYTQTKTVTSRW 478
|
Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. Length = 478 |
| >gnl|CDD|166060 PLN02419, PLN02419, methylmalonate-semialdehyde dehydrogenase [acylating] | Back alignment and domain information |
|---|
Score = 673 bits (1737), Expect = 0.0
Identities = 336/530 (63%), Positives = 414/530 (78%), Gaps = 14/530 (2%)
Query: 168 LSEKSFKSWRPN----RSTPVNTSASPSGVSPNIDNNRVSNFIGGKFVDLRGSATIDVIN 223
+S + + RP RS+ ++TS S P + RV N IGG FV+ + S+ IDVIN
Sbjct: 78 ISGNNLRPLRPQFLALRSSWLSTSPEQS-TQPQMPP-RVPNLIGGSFVESQSSSFIDVIN 135
Query: 224 PATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAM 283
PATQEV S+VPLTT EEFK AV AAK+AFP W+NTP+ TRQR+M K QELIR+++DKLAM
Sbjct: 136 PATQEVVSKVPLTTNEEFKAAVSAAKQAFPLWRNTPITTRQRVMLKFQELIRKNMDKLAM 195
Query: 284 NITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAG 343
NIT EQG TLK + D+ GLEVVE AC +ATLQ+GE++PN G+DTY REPLGVCAG
Sbjct: 196 NITTEQGKTLKDSHGDIFRGLEVVEHACGMATLQMGEYLPNVSNGVDTYSIREPLGVCAG 255
Query: 344 ICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGT 403
ICPFNFP M PLWMF +AVTCGNTFILKPSEK+PG S+ILA LAMEAGLPDGVLNIVHGT
Sbjct: 256 ICPFNFPAMIPLWMFPVAVTCGNTFILKPSEKDPGASVILAELAMEAGLPDGVLNIVHGT 315
Query: 404 NDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMPDASIDAT 463
ND +N ICDDEDI+A+SFV S+TA + +YARAAA+GKR+QSN G KN+ +++PDA+IDAT
Sbjct: 316 NDTVNAICDDEDIRAVSFVGSNTAGMHIYARAAAKGKRIQSNMGAKNHGLVLPDANIDAT 375
Query: 464 LNALVSAGFGAAGERCTALSTAVFVGSSVQWEDELVELAKALKVNVGTDASADVGPVVSV 523
LNAL++AGFGAAG+RC ALST VFVG + WED+LVE AKALKV G++ AD+GPV+S
Sbjct: 376 LNALLAAGFGAAGQRCMALSTVVFVGDAKSWEDKLVERAKALKVTCGSEPDADLGPVISK 435
Query: 524 EVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGP 583
+ K++I RLIQ+ VD+GA LLLDGR+IVVPGYE GNF+GPTIL VT +MECYKEEIFGP
Sbjct: 436 QAKERICRLIQSGVDDGAKLLLDGRDIVVPGYEKGNFIGPTILSGVTPDMECYKEEIFGP 495
Query: 584 VLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPVPS---- 639
VL+ MQA+S +EAI ++N+N++ NGA+IFTSSG AARKFQ +IEA +GINVP+P
Sbjct: 496 VLVCMQANSFDEAISIINKNKYGNGAAIFTSSGAAARKFQMDIEAGQIGINVPIPVPLPF 555
Query: 640 -SFSSINES--GEFNFCGKSGVQFYTQIKTVAQQWNDLPKLGMPLTMPLS 686
SF+ S G+ NF GK+GV F+TQIK V Q+ D+ L +P+
Sbjct: 556 FSFTGNKASFAGDLNFYGKAGVDFFTQIKLVTQKQKDIHS-PFSLAIPIL 604
|
Length = 604 |
| >gnl|CDD|130783 TIGR01722, MMSDH, methylmalonic acid semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 566 bits (1461), Expect = 0.0
Identities = 221/477 (46%), Positives = 306/477 (64%), Gaps = 7/477 (1%)
Query: 202 VSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVA 261
V+++IGGKF + I V NPAT EV ++V + +E AV +A+ F W T +A
Sbjct: 1 VNHWIGGKFAEGASGTYIPVTNPATNEVTTKVAFASVDEVDAAVASARETFLTWGQTSLA 60
Query: 262 TRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEF 321
R ++ + Q L++ D++A IT E G T A DV GLEVVE AC V +L GE
Sbjct: 61 QRTSVLLRYQALLKEHRDEIAELITAEHGKTHSDALGDVARGLEVVEHACGVNSLLKGET 120
Query: 322 VPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSM 381
+D Y R+PLGVCAGI PFNFP M PLWMF IA+ CGNTF+LKPSEK P ++
Sbjct: 121 STQVATRVDVYSIRQPLGVCAGITPFNFPAMIPLWMFPIAIACGNTFVLKPSEKVPSAAV 180
Query: 382 ILAALAMEAGLPDGVLNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAARGKR 441
LA L EAG PDGVLN+VHG + ++ + + D+KA+SFV S+ ++ +A GKR
Sbjct: 181 KLAELFSEAGAPDGVLNVVHGDKEAVDRLLEHPDVKAVSFVGSTPIGRYIHTTGSAHGKR 240
Query: 442 VQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWEDELVEL 501
VQ+ G KN+ ++MPDA DA +ALV A +GAAG+RC A+S AV VG++ +W E+ E
Sbjct: 241 VQALGGAKNHMVVMPDADKDAAADALVGAAYGAAGQRCMAISAAVLVGAADEWVPEIRER 300
Query: 502 AKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFV 561
A+ +++ G D A++GP+++ + KD+++ LI GA +LLDGR V GYE GN+V
Sbjct: 301 AEKIRIGPGDDPGAEMGPLITPQAKDRVASLIAGGAAEGAEVLLDGRGYKVDGYEEGNWV 360
Query: 562 GPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARK 621
GPT+L V M+ Y+EEIFGPVL ++AD+LEEAI ++N + + NG +IFT G AAR+
Sbjct: 361 GPTLLERVPPTMKAYQEEIFGPVLCVLEADTLEEAIALINASPYGNGTAIFTRDGAAARR 420
Query: 622 FQNEIEARLVGINVPVPS-----SFSSINES--GEFNFCGKSGVQFYTQIKTVAQQW 671
FQ+EIE VG+NVP+P SF+ +S G+ + GK G FYT+ KTV +W
Sbjct: 421 FQHEIEVGQVGVNVPIPVPLPYFSFTGWKDSFFGDHHIYGKQGTHFYTRGKTVTTRW 477
|
Involved in valine catabolism, methylmalonate-semialdehyde dehydrogenase catalyzes the irreversible NAD+- and CoA-dependent oxidative decarboxylation of methylmalonate semialdehyde to propionyl-CoA. Methylmalonate-semialdehyde dehydrogenase has been characterized in both prokaryotes and eukaryotes, functioning as a mammalian tetramer and a bacterial homodimer. Although similar in monomeric molecular mass and enzymatic activity, the N-terminal sequence in P.aeruginosa does not correspond with the N-terminal sequence predicted for rat liver. Sequence homology to a variety of prokaryotic and eukaryotic aldehyde dehydrogenases places MMSDH in the aldehyde dehydrogenase (NAD+) superfamily (pfam00171), making MMSDH's CoA requirement unique among known ALDHs. Methylmalonate semialdehyde dehydrogenase is closely related to betaine aldehyde dehydrogenase, 2-hydroxymuconic semialdehyde dehydrogenase, and class 1 and 2 aldehyde dehydrogenase. In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus [Energy metabolism, Amino acids and amines]. Length = 477 |
| >gnl|CDD|215767 pfam00171, Aldedh, Aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Score = 436 bits (1124), Expect = e-143
Identities = 175/460 (38%), Positives = 251/460 (54%), Gaps = 14/460 (3%)
Query: 216 SATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIR 275
S TI+VINPAT EV + VP T E+ AV AA+ AF AW TP + R I+ K +L+
Sbjct: 6 SETIEVINPATGEVIATVPAATAEDVDAAVAAARAAFKAWAKTPPSERAAILLKAADLLE 65
Query: 276 RDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFR 335
D+LA T+E G L A+ +V ++ + +A GE +P+ G+ Y R
Sbjct: 66 ERRDELAELETLETGKPLAEARGEVPRAIDTLRYYAGLARKLEGETLPSDP-GVLAYTRR 124
Query: 336 EPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDG 395
EPLGV I P+NFP + W + A+ GNT +LKPSE P T+++LA L EAGLP G
Sbjct: 125 EPLGVVGAITPWNFPLLLAAWKIAPALAAGNTVVLKPSELTPLTALLLAELFEEAGLPPG 184
Query: 396 VLNIVHGTNDVI-NHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAII 454
VLN+V G+ + + + + D+ +SF S+ ++ AA KRV GGKN I+
Sbjct: 185 VLNVVTGSGSEVGDALVEHPDVDKVSFTGSTEVGRRIAKAAAKNLKRVTLELGGKNPLIV 244
Query: 455 MPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV--QWEDELVELAKALKVNVGTD 512
DA +DA + V FG AG+ CTA S + V S+ ++ + LVE AK+LKV D
Sbjct: 245 FDDADLDAAVEGAVFGAFGNAGQVCTAGSR-LLVHESIYDEFVERLVEAAKSLKVGDPLD 303
Query: 513 ASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSN 572
D+GP++S + ++++ I++A + GA LL G G E G FV PT+L DVT +
Sbjct: 304 PDTDIGPLISKKQRERVLSYIEDAKEEGAKLLCGGE----AGLEKGYFVEPTVLADVTPD 359
Query: 573 MECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVG 632
M +EEIFGPVL + +EAI++ N + A +FT+ A + +EA +V
Sbjct: 360 MRIAQEEIFGPVLSVIPFKDEDEAIELANDTEYGLAAGVFTNDLERALRVARRLEAGMVW 419
Query: 633 INV-----PVPSSFSSINESGEFNFCGKSGVQFYTQIKTV 667
IN P F +SG GK G++ YT+ KTV
Sbjct: 420 INDYTTGDPEALPFGGFKQSGFGREGGKEGLEEYTETKTV 459
|
This family of dehydrogenases act on aldehyde substrates. Members use NADP as a cofactor. The family includes the following members: The prototypical members are the aldehyde dehydrogenases EC:1.2.1.3. Succinate-semialdehyde dehydrogenase EC:1.2.1.16. Lactaldehyde dehydrogenase EC:1.2.1.22. Benzaldehyde dehydrogenase EC:1.2.1.28. Methylmalonate-semialdehyde dehydrogenase EC:1.2.1.27. Glyceraldehyde-3-phosphate dehydrogenase EC:1.2.1.9. Delta-1-pyrroline-5-carboxylate dehydrogenase EC: 1.5.1.12. Acetaldehyde dehydrogenase EC:1.2.1.10. Glutamate-5-semialdehyde dehydrogenase EC:1.2.1.41. This family also includes omega crystallin, an eye lens protein from squid and octopus that has little aldehyde dehydrogenase activity. Length = 459 |
| >gnl|CDD|223944 COG1012, PutA, NAD-dependent aldehyde dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 408 bits (1052), Expect = e-132
Identities = 179/482 (37%), Positives = 257/482 (53%), Gaps = 19/482 (3%)
Query: 202 VSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVA 261
I G++VD G++TI+VINPAT EV + VP T E+ AV AA+ AF AW
Sbjct: 1 YKLLIDGEWVD--GASTIEVINPATGEVIATVPAATAEDVDAAVAAARAAFEAWSRLSAE 58
Query: 262 TRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEF 321
R I+ ++ +L+ ++LA IT+E G + A+ ++ + + A GE
Sbjct: 59 ERAAILRRIADLLEARAEELAALITLETGKPISEARGEIARAADFIRYYAEEARRLEGET 118
Query: 322 VPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSM 381
+P G REPLGV I P+NFP W + A+ GNT +LKPSE+ P +++
Sbjct: 119 IPTDK-GSKALVRREPLGVVGAITPWNFPLALAAWKLAPALAAGNTVVLKPSEQTPLSAL 177
Query: 382 ILAALAMEAGLPDGVLNIVHGTNDVI-NHICDDEDIKAISFVASSTASVQMYARAAARGK 440
LA LA EAGLP GVLN+V G + + + D+ AISF S+ + A AAA K
Sbjct: 178 ALAELAAEAGLPAGVLNVVTGGGAEVGDALVAHPDVDAISFTGSTAVGRAIAAAAAANLK 237
Query: 441 RVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV--QWEDEL 498
V GGK+ AI++ DA +DA ++A V F AG+RCTA S + V SV ++ + L
Sbjct: 238 PVTLELGGKSPAIVLEDADLDAAVDAAVFGAFFNAGQRCTAAS-RLIVHESVYDEFVERL 296
Query: 499 VELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENG 558
V A +LKV D S D+GP++S E D++ I++AV GA LL G+ G
Sbjct: 297 VARAASLKVGDPLDPSTDLGPLISEEQLDRVEGYIEDAVAEGARLLAGGKR------PGG 350
Query: 559 NFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLA 618
FV PTIL VT +M +EEIFGPVL ++ EEAI++ N + A+IFT
Sbjct: 351 YFVEPTILEGVTPDMRIAREEIFGPVLPVIRFKDEEEAIELANDTEYGLAAAIFTRDLAR 410
Query: 619 ARKFQNEIEARLVGINVPVPSS------FSSINESGEFNFCGKSGVQFYTQIKTVAQQWN 672
A + +EA +VGIN + F + +SG GK G++ +T++KTV +
Sbjct: 411 AFRVARRLEAGMVGINDYTGGADIAYLPFGGVKQSGLGREGGKYGLEEFTEVKTVTIKLG 470
Query: 673 DL 674
Sbjct: 471 PA 472
|
Length = 472 |
| >gnl|CDD|143397 cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Score = 347 bits (893), Expect = e-110
Identities = 155/432 (35%), Positives = 217/432 (50%), Gaps = 12/432 (2%)
Query: 244 AVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFG 303
AV AA+ AF AW P A R I+ KL +L+ ++LA T+E G ++ A +V
Sbjct: 3 AVAAARAAFKAWAALPPAERAAILRKLADLLEERREELAALETLETGKPIEEALGEVARA 62
Query: 304 LEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVT 363
+ +A GE +P+ G REPLGV I P+NFP + W + A+
Sbjct: 63 ADTFRYYAGLARRLHGEVIPSPDPGELAIVRREPLGVVGAITPWNFPLLLAAWKLAPALA 122
Query: 364 CGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGTNDVI-NHICDDEDIKAISFV 422
GNT +LKPSE P T+++LA L EAGLP GVLN+V G D + + + ISF
Sbjct: 123 AGNTVVLKPSELTPLTALLLAELLAEAGLPPGVLNVVTGDGDEVGAALASHPRVDKISFT 182
Query: 423 ASSTASVQMYARAAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTAL 482
S+ + AA KRV GGK+ I+ DA +DA + V FG AG+ CTA
Sbjct: 183 GSTAVGKAIMRAAAENLKRVTLELGGKSPLIVFDDADLDAAVKGAVFGAFGNAGQVCTAA 242
Query: 483 STAVFVGSSV--QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNG 540
S + V S+ ++ + LVE KALKV D D+GP++S D++ I++A G
Sbjct: 243 S-RLLVHESIYDEFVERLVERVKALKVGNPLDPDTDMGPLISAAQLDRVLAYIEDAKAEG 301
Query: 541 ASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMV 600
A LL G+ G FV PT+L DV +M +EEIFGPVL + EEAI++
Sbjct: 302 AKLLCGGK---RLEGGKGYFVPPTVLTDVDPDMPIAQEEIFGPVLPVIPFKDEEEAIELA 358
Query: 601 NRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPVPSSFSS-----INESGEFNFCGK 655
N + A +FT A + +EA V IN + S + +SG G
Sbjct: 359 NDTEYGLAAGVFTRDLERALRVAERLEAGTVWINDYSVGAEPSAPFGGVKQSGIGREGGP 418
Query: 656 SGVQFYTQIKTV 667
G++ YT+ KTV
Sbjct: 419 YGLEEYTEPKTV 430
|
The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-like) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. Length = 432 |
| >gnl|CDD|143415 cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like | Back alignment and domain information |
|---|
Score = 337 bits (866), Expect = e-105
Identities = 161/481 (33%), Positives = 244/481 (50%), Gaps = 29/481 (6%)
Query: 204 NFIGGKFVDLRGSATIDVINPA-TQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVAT 262
N+I G++V G + NP+ T +V + + E+ A+ AA AFPAW+ T
Sbjct: 3 NYIDGEWVA--GGDGEENRNPSDTSDVVGKYARASAEDADAAIAAAAAAFPAWRRTSPEA 60
Query: 263 RQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFV 322
R I+ K + + ++LA +T E+G TL A+ +V ++ A GE +
Sbjct: 61 RADILDKAGDELEARKEELARLLTREEGKTLPEARGEVTRAGQIFRYYAGEALRLSGETL 120
Query: 323 PNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMI 382
P+ G++ REPLGV I P+NFP P W + A+ GNT + KP+E P ++
Sbjct: 121 PSTRPGVEVETTREPLGVVGLITPWNFPIAIPAWKIAPALAYGNTVVFKPAELTPASAWA 180
Query: 383 LAALAMEAGLPDGVLNIVHGTNDVINH-ICDDEDIKAISFVASSTASVQMYARAAARGKR 441
L + EAGLP GV N+V G+ + + + D+ A+SF S+ ++ A AAARG R
Sbjct: 181 LVEILEEAGLPAGVFNLVMGSGSEVGQALVEHPDVDAVSFTGSTAVGRRIAAAAAARGAR 240
Query: 442 VQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV--QWEDELV 499
VQ GGKN +++ DA +D + V F + G+RCTA S + V + ++ + LV
Sbjct: 241 VQLEMGGKNPLVVLDDADLDLAVECAVQGAFFSTGQRCTASSRLI-VTEGIHDRFVEALV 299
Query: 500 ELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGN 559
E KALKV D D+GPVVS ++ R I+ A GA L+ G + + G
Sbjct: 300 ERTKALKVGDALDEGVDIGPVVSERQLEKDLRYIEIARSEGAKLVYGGERL--KRPDEGY 357
Query: 560 FVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAA 619
++ P + VT++M +EEIFGPV ++ +EA+ + N F A I T+S A
Sbjct: 358 YLAPALFAGVTNDMRIAREEIFGPVAAVIRVRDYDEALAIANDTEFGLSAGIVTTSLKHA 417
Query: 620 RKFQNEIEARLVGINVP-------VP------SSFSSINESGEFNFCGKSGVQFYTQIKT 666
F+ +EA +V +N+P VP SS+ E GE ++FYT IKT
Sbjct: 418 THFKRRVEAGVVMVNLPTAGVDYHVPFGGRKGSSYGP-REQGEA------ALEFYTTIKT 470
Query: 667 V 667
V
Sbjct: 471 V 471
|
Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. Length = 473 |
| >gnl|CDD|143421 cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like | Back alignment and domain information |
|---|
Score = 329 bits (846), Expect = e-102
Identities = 155/463 (33%), Positives = 237/463 (51%), Gaps = 26/463 (5%)
Query: 221 VINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDK 280
VINPAT EV +VP + A+DAA AF W+ T R I+ + +LIR +
Sbjct: 1 VINPATGEVIGEVPDAGAADADAAIDAAAAAFKTWRKTTARERAAILRRWADLIRERAED 60
Query: 281 LAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGV 340
LA +T+EQG L A+ +V + +E A G +P+ G ++P+GV
Sbjct: 61 LARLLTLEQGKPLAEARGEVDYAASFLEWFAEEARRIYGRTIPSPAPGKRILVIKQPVGV 120
Query: 341 CAGICPFNFPDMTPLWMF----SIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGV 396
A I P+NF P M + A+ G T +LKP+E+ P +++ LA LA EAGLP GV
Sbjct: 121 VAAITPWNF----PAAMITRKIAPALAAGCTVVLKPAEETPLSALALAELAEEAGLPAGV 176
Query: 397 LNIVHGTNDVI-NHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIM 455
LN+V G+ I +C ++ ISF S+ + A+AA KRV GG I+
Sbjct: 177 LNVVTGSPAEIGEALCASPRVRKISFTGSTAVGKLLMAQAADTVKRVSLELGGNAPFIVF 236
Query: 456 PDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV--QWEDELVELAKALKVNVGTDA 513
DA +D ++ +++ F AG+ C + ++V S+ ++ ++LVE K LKV G D
Sbjct: 237 DDADLDKAVDGAIASKFRNAGQTCVC-ANRIYVHESIYDEFVEKLVERVKKLKVGNGLDE 295
Query: 514 SADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNM 573
D+GP+++ +++ L+++AV GA +L G+ + + GY F PT+L DVT +M
Sbjct: 296 GTDMGPLINERAVEKVEALVEDAVAKGAKVLTGGKRLGLGGY----FYEPTVLTDVTDDM 351
Query: 574 ECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGI 633
EE FGPV + D+ +E I N + A +FT A + +EA +VGI
Sbjct: 352 LIMNEETFGPVAPIIPFDTEDEVIARANDTPYGLAAYVFTRDLARAWRVAEALEAGMVGI 411
Query: 634 NVPVPSS----FSSINESG---EFNFCGKSGVQFYTQIKTVAQ 669
N + S F + ESG E GK G++ Y + K V+
Sbjct: 412 NTGLISDAEAPFGGVKESGLGRE---GGKEGLEEYLETKYVSL 451
|
Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. Length = 451 |
| >gnl|CDD|143449 cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like | Back alignment and domain information |
|---|
Score = 325 bits (836), Expect = e-101
Identities = 166/474 (35%), Positives = 251/474 (52%), Gaps = 11/474 (2%)
Query: 204 NFIGGKFVDLRGSATIDVINPA-TQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVAT 262
N+IGG++VD T D NPA +EV PL+T + AV+AA+ AFP W+ P
Sbjct: 1 NYIGGEWVDSASGETFDSRNPADLEEVVGTFPLSTASDVDAAVEAAREAFPEWRKVPAPR 60
Query: 263 RQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFV 322
R +F+ EL+++ ++LA +T E G L + DV +++ + A GE V
Sbjct: 61 RAEYLFRAAELLKKRKEELARLVTREMGKPLAEGRGDVQEAIDMAQYAAGEGRRLFGETV 120
Query: 323 PNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMI 382
P+ L D R+P+GV A I P+NFP P W A+ CGNT + KP+E P ++
Sbjct: 121 PSELPNKDAMTRRQPIGVVALITPWNFPVAIPSWKIFPALVCGNTVVFKPAEDTPACALK 180
Query: 383 LAALAMEAGLPDGVLNIVHGTND-VINHICDDEDIKAISFVASSTASVQMYARAAARGKR 441
L L EAGLP GV+N+VHG + V + + D+ +SF S+ ++ A KR
Sbjct: 181 LVELFAEAGLPPGVVNVVHGRGEEVGEALVEHPDVDVVSFTGSTEVGERIGETCARPNKR 240
Query: 442 VQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV--QWEDELV 499
V GGKN I+M DA +D L + + FG G+RCTA S + V SV ++ V
Sbjct: 241 VALEMGGKNPIIVMDDADLDLALEGALWSAFGTTGQRCTATSRLI-VHESVYDEFLKRFV 299
Query: 500 ELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGN 559
E AK L+V G D D+GP+++ +++ + + GA+LLL G + GYE G
Sbjct: 300 ERAKRLRVGDGLDEETDMGPLINEAQLEKVLNYNEIGKEEGATLLLGGERLTGGGYEKGY 359
Query: 560 FVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAA 619
FV PT+ DVT +M +EEIFGPV+ ++ SLEEAI++ N + ++I+T A
Sbjct: 360 FVEPTVFTDVTPDMRIAQEEIFGPVVALIEVSSLEEAIEIANDTEYGLSSAIYTEDVNKA 419
Query: 620 RKFQNEIEARLVGINVP-----VPSSFSSINESGE-FNFCGKSGVQFYTQIKTV 667
+ + ++EA + +N P V F + +SG G + + +T+ K V
Sbjct: 420 FRARRDLEAGITYVNAPTIGAEVHLPFGGVKKSGNGHREAGTTALDAFTEWKAV 473
|
Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. Length = 478 |
| >gnl|CDD|143407 cd07088, ALDH_LactADH-AldA, Escherichia coli lactaldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Score = 317 bits (815), Expect = 4e-98
Identities = 170/473 (35%), Positives = 256/473 (54%), Gaps = 17/473 (3%)
Query: 205 FIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQ 264
+I G+FV TIDV+NPAT EV + VP T E+ AVDAA+ A AW+ P R
Sbjct: 1 YINGEFVPSSSGETIDVLNPATGEVVATVPAATAEDADRAVDAAEAAQKAWERLPAIERA 60
Query: 265 RIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVPN 324
+ KL +LIR + D+LA I EQG TL A+ +V F + ++ A GE +P+
Sbjct: 61 AYLRKLADLIRENADELAKLIVEEQGKTLSLARVEVEFTADYIDYMAEWARRIEGEIIPS 120
Query: 325 ALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILA 384
+ + F+ P+GV AGI P+NFP + A+ GNT ++KPSE+ P ++ A
Sbjct: 121 DRPNENIFIFKVPIGVVAGILPWNFPFFLIARKLAPALVTGNTIVIKPSEETPLNALEFA 180
Query: 385 ALAMEAGLPDGVLNIVHGTNDVI-NHICDDEDIKAISFVASSTASVQMYARAAARGKRVQ 443
L EAGLP GVLNIV G V+ + + + IS S+ A ++ AA +V
Sbjct: 181 ELVDEAGLPAGVLNIVTGRGSVVGDALVAHPKVGMISLTGSTEAGQKIMEAAAENITKVS 240
Query: 444 SNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV--QWEDELVEL 501
GGK AI+M DA +D + A+V + G+ CT + V+V + ++ ++LVE
Sbjct: 241 LELGGKAPAIVMKDADLDLAVKAIVDSRIINCGQVCTC-AERVYVHEDIYDEFMEKLVEK 299
Query: 502 AKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFV 561
KA+KV DA+ D+GP+V+ D++ +++ AV+ GA+LL G+ P E G F
Sbjct: 300 MKAVKVGDPFDAATDMGPLVNEAALDKVEEMVERAVEAGATLLTGGK---RPEGEKGYFY 356
Query: 562 GPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARK 621
PT+L +V +ME +EEIFGPVL ++ SL+EAI++ N + + + I+T + A +
Sbjct: 357 EPTVLTNVRQDMEIVQEEIFGPVLPVVKFSSLDEAIELANDSEYGLTSYIYTENLNTAMR 416
Query: 622 FQNEIEARLVGINVPVPSSFSSIN-------ESGEFNFCGKSGVQFYTQIKTV 667
NE+E IN +F ++ +SG GK G++ Y Q K V
Sbjct: 417 ATNELEFGETYINRE---NFEAMQGFHAGWKKSGLGGADGKHGLEEYLQTKVV 466
|
Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. Length = 468 |
| >gnl|CDD|143412 cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogenase family 8 member A1-like | Back alignment and domain information |
|---|
Score = 297 bits (762), Expect = 1e-90
Identities = 154/456 (33%), Positives = 224/456 (49%), Gaps = 10/456 (2%)
Query: 221 VINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDK 280
NPAT EV ++VP E AV AAK AFP W A R RI+ K+ +LI D+
Sbjct: 1 NFNPATGEVLAKVPEGGAAEVDAAVAAAKEAFPGWSRMSPAERARILHKVADLIEARADE 60
Query: 281 LAMNITVEQGTTLKAAQ-RDVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLG 339
LA+ +++ G + A+ RD+ GE P G Y R+P+G
Sbjct: 61 LALLESLDTGKPITLARTRDIPRAAANFRFFADYILQLDGESYPQD-GGALNYVLRQPVG 119
Query: 340 VCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNI 399
V I P+N P M W + A+ GNT +LKPSE P T+ +LA LA EAGLP GV+N+
Sbjct: 120 VAGLITPWNLPLMLLTWKIAPALAFGNTVVLKPSEWTPLTAWLLAELANEAGLPPGVVNV 179
Query: 400 VHGTNDVI-NHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMPDA 458
VHG + D+ ISF + + AA K V GGKN I+ DA
Sbjct: 180 VHGFGPEAGAALVAHPDVDLISFTGETATGRTIMRAAAPNLKPVSLELGGKNPNIVFADA 239
Query: 459 SIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWE--DELVELAKALKVNVGTDASAD 516
+D ++A V + F GE C A + + V S+ E + VE AKALKV D +
Sbjct: 240 DLDRAVDAAVRSSFSNNGEVCLA-GSRILVQRSIYDEFLERFVERAKALKVGDPLDPDTE 298
Query: 517 VGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECY 576
VGP++S E +++ ++ A GA++L G +P E G FV PT++ + ++
Sbjct: 299 VGPLISKEHLEKVLGYVELARAEGATILTGGGRPELPDLEGGYFVEPTVITGLDNDSRVA 358
Query: 577 KEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVP 636
+EEIFGPV+ + D EEAI++ N + A ++T A + +EA V +N
Sbjct: 359 QEEIFGPVVTVIPFDDEEEAIELANDTPYGLAAYVWTRDLGRAHRVARRLEAGTVWVNCW 418
Query: 637 ----VPSSFSSINESGEFNFCGKSGVQFYTQIKTVA 668
+ + F + SG G ++FYT++K V
Sbjct: 419 LVRDLRTPFGGVKASGIGREGGDYSLEFYTELKNVC 454
|
In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. Length = 455 |
| >gnl|CDD|143405 cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Score = 296 bits (759), Expect = 7e-90
Identities = 136/441 (30%), Positives = 218/441 (49%), Gaps = 12/441 (2%)
Query: 204 NFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATR 263
IGG++V G T NPA E ++V + E+ + AV AA+ AF W+ P R
Sbjct: 1 GVIGGEWVG-SGGETFTSRNPANGEPIARVFPASPEDVEAAVAAAREAFKEWRKVPAPRR 59
Query: 264 QRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVP 323
I+ ++ E +R+ + L +++E G L +V +++ + A ++ + G +P
Sbjct: 60 GEIVRQIGEALRKKKEALGRLVSLEMGKILPEGLGEVQEMIDICDYAVGLSRMLYGLTIP 119
Query: 324 NALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMIL 383
+ G PLGV I FNFP P W +IA+ CGNT + KPSE P T++ +
Sbjct: 120 SERPGHRLMEQWNPLGVVGVITAFNFPVAVPGWNAAIALVCGNTVVWKPSETTPLTAIAV 179
Query: 384 AALAMEA----GLPDGVLNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAARG 439
+ E GLP GV+N+V G D + D + +SF S+ ++ A R
Sbjct: 180 TKILAEVLEKNGLPPGVVNLVTGGGDGGELLVHDPRVPLVSFTGSTEVGRRVGETVARRF 239
Query: 440 KRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV--QWEDE 497
RV GG N I+M DA +D + A++ A G AG+RCT + V SV ++ +
Sbjct: 240 GRVLLELGGNNAIIVMDDADLDLAVRAVLFAAVGTAGQRCTTTRR-LIVHESVYDEFLER 298
Query: 498 LVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYEN 557
LV+ K +++ D VGP+++ ++ I+ A G ++L G+ + G E
Sbjct: 299 LVKAYKQVRIGDPLDEGTLVGPLINQAAVEKYLNAIEIAKSQGGTVLTGGK--RIDGGEP 356
Query: 558 GNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGL 617
GN+V PTI+ VT + +EE F P+L ++ DSLEEAI + N +SIFT
Sbjct: 357 GNYVEPTIVTGVTDDARIVQEETFAPILYVIKFDSLEEAIAINNDVPQGLSSSIFTEDLR 416
Query: 618 AARKFQ--NEIEARLVGINVP 636
A ++ + +V +N+P
Sbjct: 417 EAFRWLGPKGSDCGIVNVNIP 437
|
ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). Length = 478 |
| >gnl|CDD|143410 cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins | Back alignment and domain information |
|---|
Score = 282 bits (725), Expect = 3e-85
Identities = 165/488 (33%), Positives = 234/488 (47%), Gaps = 45/488 (9%)
Query: 205 FIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPA--WKNTPVAT 262
FI +FVD T INPAT+EV QV E+ AV AA+ AF W+
Sbjct: 7 FINNEFVDSVSGKTFPTINPATEEVICQVAEADEEDVDAAVKAARAAFETGWWRKMDPRE 66
Query: 263 RQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQR-DVLFGLEVVEQACAVATLQI--- 318
R R++ KL +LI RD D+LA +++ G L+ + + DV A ++ L+
Sbjct: 67 RGRLLNKLADLIERDRDELAALESLDNGKPLEESAKGDV---------ALSIKCLRYYAG 117
Query: 319 ------GEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKP 372
G+ +P L Y REP+GVC I P+NFP + W + A+ GNT +LKP
Sbjct: 118 WADKIQGKTIPIDGNFL-AYTRREPIGVCGQIIPWNFPLLMLAWKLAPALAAGNTVVLKP 176
Query: 373 SEKNPGTSMILAALAMEAGLPDGVLNIVHGTNDVI-NHICDDEDIKAISFVASSTASVQM 431
+E+ P +++ LA L EAG P GV+NIV G I D+ I+F STA +
Sbjct: 177 AEQTPLSALYLAELIKEAGFPPGVVNIVPGFGPTAGAAISSHMDVDKIAFTG-STAVGRT 235
Query: 432 YARAAARG--KRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVG 489
AAA+ K+V GGK+ I+ DA +D + F G+ C A S +FV
Sbjct: 236 IMEAAAKSNLKKVTLELGGKSPNIVFDDADLDKAVEWAAFGIFFNQGQCCCAGSR-IFVQ 294
Query: 490 SSVQWEDELVELAKAL--KVNVGT--DASADVGPVVSVEVKDQISRLIQNAVDNGASLLL 545
S+ DE VE KA K VG D GP VS D+I I++ GA+LL
Sbjct: 295 ESIY--DEFVEKFKARAEKRVVGDPFDPDTFQGPQVSKAQFDKILSYIESGKKEGATLLT 352
Query: 546 DGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRF 605
G GY F+ PT+ DV +M+ KEEIFGPV+ ++ + +E I+ N +
Sbjct: 353 GGERHGSKGY----FIQPTVFTDVKDDMKIAKEEIFGPVVTILKFKTEDEVIERANDTEY 408
Query: 606 VNGASIFTSSGLAARKFQNEIEARLVGIN------VPVPSSFSSINESGEFNFCGKSGVQ 659
A +FT A + ++A V +N VP F +SG G+ G++
Sbjct: 409 GLAAGVFTKDINKALRVSRALKAGTVWVNTYNVFDAAVP--FGGFKQSGFGRELGEEGLE 466
Query: 660 FYTQIKTV 667
YTQ+K V
Sbjct: 467 EYTQVKAV 474
|
ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. Also included in this subfamily is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial, homotetramers that oxidize acetaldehyde and glycolaldehyde, as well as, the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Also included is the AldA aldehyde dehydrogenase of Aspergillus nidulans (locus AN0554), the aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) of Saccharomyces cerevisiae, and other similar sequences. Length = 476 |
| >gnl|CDD|143468 cd07150, ALDH_VaniDH_like, Pseudomonas putida vanillin dehydrogenase-like | Back alignment and domain information |
|---|
Score = 281 bits (721), Expect = 5e-85
Identities = 144/442 (32%), Positives = 225/442 (50%), Gaps = 26/442 (5%)
Query: 220 DVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDID 279
D +NPA V ++V + + ++ + A+ AA AFPAW T + R+RI+ K E++ R D
Sbjct: 2 DDLNPADGSVYARVAVGSRQDAERAIAAAYDAFPAWAATTPSERERILLKAAEIMERRAD 61
Query: 280 KLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLG 339
L + E G+T A + F E++ A GE +P+ G + R PLG
Sbjct: 62 DLIDLLIDEGGSTYGKAWFETTFTPELLRAAAGECRRVRGETLPSDSPGTVSMSVRRPLG 121
Query: 340 VCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNI 399
V AGI PFN+P + + A+ GNT +LKPSE+ P + +A + EAGLP GV N+
Sbjct: 122 VVAGITPFNYPLILATKKVAFALAAGNTVVLKPSEETPVIGLKIAEIMEEAGLPKGVFNV 181
Query: 400 VHGTNDVI-NHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMPDA 458
V G + + + DD ++ ++F S+ ++ +A K++ GGKN I++ DA
Sbjct: 182 VTGGGAEVGDELVDDPRVRMVTFTGSTAVGREIAEKAGRHLKKITLELGGKNPLIVLADA 241
Query: 459 SIDATLNALVSAGFGA---AGERCTALSTAVFVGSSV--QWEDELVELAKALKVNVGTDA 513
+D + A A FGA G+ C + ++ + V V ++ + V A LKV D
Sbjct: 242 DLDYAVRA---AAFGAFMHQGQICMS-ASRIIVEEPVYDEFVKKFVARASKLKVGDPRDP 297
Query: 514 SADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNM 573
+GP++S ++I R +++AV GA LL G +GNF PT+L DVT +M
Sbjct: 298 DTVIGPLISPRQVERIKRQVEDAVAKGAKLL-------TGGKYDGNFYQPTVLTDVTPDM 350
Query: 574 ECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGI 633
++EE FGPV + A EEA+++ N + A+I T+ A K +E+ +V I
Sbjct: 351 RIFREETFGPVTSVIPAKDAEEALELANDTEYGLSAAILTNDLQRAFKLAERLESGMVHI 410
Query: 634 NVP-------VPSSFSSINESG 648
N P VP F + SG
Sbjct: 411 NDPTILDEAHVP--FGGVKASG 430
|
Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. Length = 451 |
| >gnl|CDD|143456 cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like | Back alignment and domain information |
|---|
Score = 277 bits (712), Expect = 2e-83
Identities = 161/484 (33%), Positives = 239/484 (49%), Gaps = 38/484 (7%)
Query: 204 NFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATR 263
+I G +V G+ TIDVINPAT+EV VPL T + AV AA+RAFPAW T V R
Sbjct: 1 FYIDGAWVAPAGTETIDVINPATEEVIGTVPLGTAADVDRAVAAARRAFPAWSATSVEER 60
Query: 264 QRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRD-VLFGLEVVEQACAVA-TLQIGEF 321
++ ++ E D+LA IT+E G + A+ V G+ + A + E
Sbjct: 61 AALLERIAEAYEARADELAQAITLEMGAPITLARAAQVGLGIGHLRAAADALKDFEFEER 120
Query: 322 VPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSI------AVTCGNTFILKPSEK 375
N+L REP+GVC I P+N+P + I A+ G T +LKPSE
Sbjct: 121 RGNSL------VVREPIGVCGLITPWNWP------LNQIVLKVAPALAAGCTVVLKPSEV 168
Query: 376 NPGTSMILAALAMEAGLPDGVLNIVHGTNDVI-NHICDDEDIKAISFVASSTASVQMYAR 434
P +++ILA + EAGLP GV N+V+G V+ + D+ +SF S+ A ++
Sbjct: 169 APLSAIILAEILDEAGLPAGVFNLVNGDGPVVGEALSAHPDVDMVSFTGSTRAGKRVAEA 228
Query: 435 AAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQW 494
AA KRV GGK+ II+ DA ++ + V+A F +G+ C A T + V S
Sbjct: 229 AADTVKRVALELGGKSANIILDDADLEKAVPRGVAACFANSGQSCNAP-TRMLVPRSRY- 286
Query: 495 EDELVELAKAL--KVNVG--TDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNI 550
E E+A A VG D + +GP+ S D++ IQ ++ GA L+ G
Sbjct: 287 -AEAEEIAAAAAEAYVVGDPRDPATTLGPLASAAQFDRVQGYIQKGIEEGARLVAGGPGR 345
Query: 551 VVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGAS 610
G E G FV PT+ DVT +M +EEIFGPVL + D +EAI + N +
Sbjct: 346 PE-GLERGYFVKPTVFADVTPDMTIAREEIFGPVLSIIPYDDEDEAIAIANDTPYGLAGY 404
Query: 611 IFTSSGLAARKFQNEIEARLVGINVPVPSS---FSSINESG---EFNFCGKSGVQFYTQI 664
++++ AR + A V IN + F +SG E+ G+ G++ + ++
Sbjct: 405 VWSADPERARAVARRLRAGQVHINGAAFNPGAPFGGYKQSGNGREW---GRYGLEEFLEV 461
Query: 665 KTVA 668
K++
Sbjct: 462 KSIQ 465
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. Length = 466 |
| >gnl|CDD|143432 cd07114, ALDH_DhaS, Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like | Back alignment and domain information |
|---|
Score = 275 bits (706), Expect = 1e-82
Identities = 144/467 (30%), Positives = 221/467 (47%), Gaps = 32/467 (6%)
Query: 221 VINPATQEVGSQVPLTTYEEFKDAVDAAKRAF--PAWKNTPVATRQRIMFKLQELIRRDI 278
INPAT E ++VP + + AV AA+ AF AW+ R +++ +L +LI +
Sbjct: 1 SINPATGEPWARVPEASAADVDRAVAAARAAFEGGAWRKLTPTERGKLLRRLADLIEANA 60
Query: 279 DKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVA-----------TLQIGEFVPNALC 327
++LA T + G ++ E Q +A ++ G +P
Sbjct: 61 EELAELETRDNGKLIR----------ETRAQVRYLAEWYRYYAGLADKIE-GAVIPVDKG 109
Query: 328 GLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALA 387
+ REPLGV A I P+N P + + A+ GNT +LKPSE P +++ LA LA
Sbjct: 110 DYLNFTRREPLGVVAAITPWNSPLLLLAKKLAPALAAGNTVVLKPSEHTPASTLELAKLA 169
Query: 388 MEAGLPDGVLNIVHGT-NDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNR 446
EAG P GV+N+V G + + + + I+F + + AA V
Sbjct: 170 EEAGFPPGVVNVVTGFGPETGEALVEHPLVAKIAFTGGTETGRHIARAAAENLAPVTLEL 229
Query: 447 GGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWE--DELVELAKA 504
GGK+ I+ DA +DA +N +V+ F AAG+ C A S + V S+ E + LV A+A
Sbjct: 230 GGKSPNIVFDDADLDAAVNGVVAGIFAAAGQTCVAGSR-LLVQRSIYDEFVERLVARARA 288
Query: 505 LKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPT 564
++V D +GP+ + +++ R + A + GA +L G G F PT
Sbjct: 289 IRVGDPLDPETQMGPLATERQLEKVERYVARAREEGARVLTGGERPSGADLGAGYFFEPT 348
Query: 565 ILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQN 624
IL DVT++M +EE+FGPVL + D EEAI + N + + A I+T A +
Sbjct: 349 ILADVTNDMRIAQEEVFGPVLSVIPFDDEEEAIALANDSEYGLAAGIWTRDLARAHRVAR 408
Query: 625 EIEARLVGIN----VPVPSSFSSINESGEFNFCGKSGVQFYTQIKTV 667
IEA V +N + S F +SG G ++ YTQ K+V
Sbjct: 409 AIEAGTVWVNTYRALSPSSPFGGFKDSGIGRENGIEAIREYTQTKSV 455
|
Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. Length = 457 |
| >gnl|CDD|143424 cd07106, ALDH_AldA-AAD23400, Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like | Back alignment and domain information |
|---|
Score = 270 bits (694), Expect = 4e-81
Identities = 156/461 (33%), Positives = 229/461 (49%), Gaps = 31/461 (6%)
Query: 221 VINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDK 280
VINPAT EV + P+ + + AV AAK AFP W TP+ R+ + + + I + ++
Sbjct: 1 VINPATGEVFASAPVASEAQLDQAVAAAKAAFPGWSATPLEERRAALLAIADAIEANAEE 60
Query: 281 LAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGV 340
LA +T+EQG L AQ +V + + A+L + + V R+PLGV
Sbjct: 61 LARLLTLEQGKPLAEAQFEVGGAVAWLR---YTASLDLPDEVIEDDDTRRVELRRKPLGV 117
Query: 341 CAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIV 400
A I P+NFP + W + A+ GNT +LKPS P ++ L LA E LP GVLN+V
Sbjct: 118 VAAIVPWNFPLLLAAWKIAPALLAGNTVVLKPSPFTPLCTLKLGELAQEV-LPPGVLNVV 176
Query: 401 HGTNDVINHICDDEDIKAISFVASSTASVQMYARAAARG-KRVQSNRGGKNYAIIMPDAS 459
G +++ + DI+ ISF STA+ + +AA+ KRV GG + AI++PD
Sbjct: 177 SGGDELGPALTSHPDIRKISFTG-STATGKKVMASAAKTLKRVTLELGGNDAAIVLPDVD 235
Query: 460 IDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWE--DELVELAKALKVNVGTDASADV 517
IDA L F +G+ C A+ ++V S+ E + LV LAKA V G D +
Sbjct: 236 IDAVAPKLFWGAFINSGQVCAAIKR-LYVHESIYDEFCEALVALAKAAVVGDGLDPGTTL 294
Query: 518 GPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYK 577
GPV + D++ L+++A GA +L G + PGY F+ PTI+ D
Sbjct: 295 GPVQNKMQYDKVKELVEDAKAKGAKVLAGGEPLDGPGY----FIPPTIVDDPPEGSRIVD 350
Query: 578 EEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGIN--- 634
EE FGPVL ++ +E I N + + GAS+++S A +EA V IN
Sbjct: 351 EEQFGPVLPVLKYSDEDEVIARANDSEYGLGASVWSSDLERAEAVARRLEAGTVWINTHG 410
Query: 635 -----VPVPSSFSSINESG---EFNFCGKSGVQFYTQIKTV 667
P F +SG EF G G++ YTQ + +
Sbjct: 411 ALDPDAP----FGGHKQSGIGVEF---GIEGLKEYTQTQVI 444
|
Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. Length = 446 |
| >gnl|CDD|143422 cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Score = 267 bits (685), Expect = 5e-80
Identities = 145/447 (32%), Positives = 219/447 (48%), Gaps = 38/447 (8%)
Query: 242 KDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVL 301
A AA A AW TP R I+ K E++ D++A + E G+T A +V
Sbjct: 3 DRAYAAAAAAQKAWAATPPQERAAILRKAAEILEERRDEIADWLIRESGSTRPKAAFEVG 62
Query: 302 FGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSI- 360
+ ++ +A + GE +P+ + G ++ R PLGV I PFNFP L M S+
Sbjct: 63 AAIAILREAAGLPRRPEGEILPSDVPGKESMVRRVPLGVVGVISPFNFP--LILAMRSVA 120
Query: 361 -AVTCGNTFILKPSEKNPGTS-MILAALAMEAGLPDGVLNIVHGTNDVI-NHICDDEDIK 417
A+ GN +LKP + P T +++A + EAGLP GVLN+V G I + + + ++
Sbjct: 121 PALALGNAVVLKPDSRTPVTGGLLIAEIFEEAGLPKGVLNVVPGGGSEIGDALVEHPRVR 180
Query: 418 AISFVASSTASVQMYARAAARG-KRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGA-- 474
ISF STA + A R K+V GG N I++ DA +D ++A A FGA
Sbjct: 181 MISFTG-STAVGRHIGELAGRHLKKVALELGGNNPLIVLDDADLDLAVSA---AAFGAFL 236
Query: 475 -AGERCTALSTAVFVGSSV--QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISR 531
G+ C A + V SV ++ ++LV AKAL V D +GP+++ D++
Sbjct: 237 HQGQICMAAGR-ILVHESVYDEFVEKLVAKAKALPVGDPRDPDTVIGPLINERQVDRVHA 295
Query: 532 LIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQAD 591
++++AV GA LL G G F PT+L DVT +M ++EEIFGPV + D
Sbjct: 296 IVEDAVAAGARLLTGGT-------YEGLFYQPTVLSDVTPDMPIFREEIFGPVAPVIPFD 348
Query: 592 SLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVP-------VPSSFSSI 644
EEA+++ N + A++FT A F +E +V IN VP F +
Sbjct: 349 DDEEAVELANDTEYGLSAAVFTRDLERAMAFAERLETGMVHINDQTVNDEPHVP--FGGV 406
Query: 645 NESGEFNFCGKSGVQFYTQIKTVAQQW 671
SG F G + ++ +T+ QW
Sbjct: 407 KASGGGRFGGPASLEEFTE-----WQW 428
|
ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. Length = 431 |
| >gnl|CDD|143437 cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 266 bits (682), Expect = 5e-79
Identities = 155/476 (32%), Positives = 246/476 (51%), Gaps = 19/476 (3%)
Query: 205 FIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAF--PAWKNTPVAT 262
+I G++V+ T D+INPA EV + VP T E+ K A+ AA+RAF W + P
Sbjct: 1 YIDGEWVEAASGKTRDIINPANGEVIATVPEGTAEDAKRAIAAARRAFDSGEWPHLPAQE 60
Query: 263 RQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFV 322
R ++F++ + IR D ++LA T+ G TL+ ++ D+ +AT + GE
Sbjct: 61 RAALLFRIADKIREDAEELARLETLNTGKTLRESEIDIDDVANCFRYYAGLATKETGEVY 120
Query: 323 ---PNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGT 379
P+ + + REP+GVC I P+N+P + W + A+ GNT ++KPSE P T
Sbjct: 121 DVPPHVI----SRTVREPVGVCGLITPWNYPLLQAAWKLAPALAAGNTVVIKPSEVTPLT 176
Query: 380 SMILAALAMEAGLPDGVLNIVHGTNDVI-NHICDDEDIKAISFVASSTASVQMYARAAAR 438
++ L L EAGLP GV+N+V G+ + + + D+ +SF TA+ + RAAA
Sbjct: 177 TIALFELIEEAGLPAGVVNLVTGSGATVGAELAESPDVDLVSFTGG-TATGRSIMRAAAG 235
Query: 439 G-KRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV--QWE 495
K+V GGKN I+ DA + ++ ++ F AG+ C+A S + V S+ ++
Sbjct: 236 NVKKVALELGGKNPNIVFADADFETAVDQALNGVFFNAGQVCSAGSR-LLVEESIHDKFV 294
Query: 496 DELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGY 555
L E AK +K+ G DA ++GP+VS E ++++ IQ + GA L+ G+
Sbjct: 295 AALAERAKKIKLGNGLDADTEMGPLVSAEHREKVLSYIQLGKEEGARLVCGGKRPTGDEL 354
Query: 556 ENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSS 615
G FV PTI DV M +EEIFGPVL + D+ EEAI++ N + +++T
Sbjct: 355 AKGYFVEPTIFDDVDRTMRIVQEEIFGPVLTVERFDTEEEAIRLANDTPYGLAGAVWTKD 414
Query: 616 GLAARKFQNEIEARLVGINVPVP----SSFSSINESGEFNFCGKSGVQFYTQIKTV 667
A + + A V IN P + + +SG G +G++ Y + K +
Sbjct: 415 IARANRVARRLRAGTVWINDYHPYFAEAPWGGYKQSGIGRELGPTGLEEYQETKHI 470
|
Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. Length = 482 |
| >gnl|CDD|143409 cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1 | Back alignment and domain information |
|---|
Score = 265 bits (679), Expect = 6e-79
Identities = 153/454 (33%), Positives = 232/454 (51%), Gaps = 9/454 (1%)
Query: 221 VINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDK 280
VI PAT EV + V E+ AV +AK A W T R RI+ K +L+R D+
Sbjct: 1 VIEPATGEVLATVHCAGAEDVDLAVKSAKAAQKEWSATSGMERGRILRKAADLLRERNDE 60
Query: 281 LAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGV 340
+A T++ G ++ A+ D+ + +E +A GE VP G Y REPLGV
Sbjct: 61 IARLETIDNGKPIEEARVDIDSSADCLEYYAGLAPTLSGEHVPLP-GGSFAYTRREPLGV 119
Query: 341 CAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIV 400
CAGI +N+P W + A+ CGN + KPS P T+++LA + EAGLPDGV N+V
Sbjct: 120 CAGIGAWNYPIQIASWKSAPALACGNAMVYKPSPFTPLTALLLAEILTEAGLPDGVFNVV 179
Query: 401 HGTNDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMPDASI 460
G + +C+ D+ +SF S ++ + AA K V GGK+ II DA +
Sbjct: 180 QGGGETGQLLCEHPDVAKVSFTGSVPTGKKVMSAAAKGIKHVTLELGGKSPLIIFDDADL 239
Query: 461 DATLNALVSAGFGAAGERCTALSTAVFVGSSV--QWEDELVELAKALKVNVGTDASADVG 518
+ +N + A F + G+ C+ T VFV S+ ++ + LVE K +++ D +G
Sbjct: 240 ENAVNGAMMANFLSQGQVCSN-GTRVFVQRSIKDEFTERLVERTKKIRIGDPLDEDTQMG 298
Query: 519 PVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVV-PGYENGNFVGPTILRDVTSNMECYK 577
++S E +++ I++A GA +L G +V G ENG +V P +L D T +M +
Sbjct: 299 ALISEEHLEKVLGYIESAKQEGAKVLCGGERVVPEDGLENGFYVSPCVLTDCTDDMTIVR 358
Query: 578 EEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGIN--- 634
EEIFGPV+ + D+ EE I+ N + A +FT A + +++A IN
Sbjct: 359 EEIFGPVMSILPFDTEEEVIRRANDTTYGLAAGVFTRDLQRAHRVIAQLQAGTCWINTYN 418
Query: 635 -VPVPSSFSSINESGEFNFCGKSGVQFYTQIKTV 667
PV F +SG G + ++ YTQ+KTV
Sbjct: 419 ISPVEVPFGGYKQSGFGRENGTAALEHYTQLKTV 452
|
NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. Length = 457 |
| >gnl|CDD|143442 cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA | Back alignment and domain information |
|---|
Score = 265 bits (680), Expect = 2e-78
Identities = 151/440 (34%), Positives = 220/440 (50%), Gaps = 17/440 (3%)
Query: 205 FIGGKFVDLRGSATIDVINPA-TQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATR 263
IGGK ++R I+ NPA EV V T EE + AV AA+ AFP W+ TP R
Sbjct: 36 VIGGK--EVRTEEKIESRNPADPSEVLGTVQKATKEEAEAAVQAARAAFPTWRRTPPEER 93
Query: 264 QRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVP 323
R++ + L+RR +LA + +E G A DV ++ +E A L++ F
Sbjct: 94 ARLLLRAAALLRRRRFELAAWMVLEVGKNWAEADADVAEAIDFLEYY-AREMLRLRGFPV 152
Query: 324 NALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMIL 383
+ G D PLGV A I P+NFP M + A+ GNT +LKP+E P + L
Sbjct: 153 EMVPGEDNRYVYRPLGVGAVISPWNFPLAILAGMTTAALVTGNTVVLKPAEDTPVIAAKL 212
Query: 384 AALAMEAGLPDGVLNIVHGTNDVI-NHICDDEDIKAISFVASSTASVQMYARAAARG--- 439
+ EAGLP GV+N + G + + +++ + D++ I+F S +++Y RAA
Sbjct: 213 VEILEEAGLPPGVVNFLPGPGEEVGDYLVEHPDVRFIAFTGSREVGLRIYERAAKVQPGQ 272
Query: 440 ---KRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWE- 495
KRV + GGKN I+ DA +D +V + FG G++C+A S V V SV E
Sbjct: 273 KWLKRVIAEMGGKNAIIVDEDADLDEAAEGIVRSAFGFQGQKCSACSR-VIVHESVYDEF 331
Query: 496 -DELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPG 554
+ LVE KALKV D +GPV+ +D+I R I+ G LLL G V+
Sbjct: 332 LERLVERTKALKVGDPEDPEVYMGPVIDKGARDRIRRYIEIGKSEG-RLLLGGE--VLEL 388
Query: 555 YENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTS 614
G FV PTI DV + +EEIFGPVL ++A +EA+++ N + +F+
Sbjct: 389 AAEGYFVQPTIFADVPPDHRLAQEEIFGPVLAVIKAKDFDEALEIANDTEYGLTGGVFSR 448
Query: 615 SGLAARKFQNEIEARLVGIN 634
S + + E E + N
Sbjct: 449 SPEHLERARREFEVGNLYAN 468
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. Length = 512 |
| >gnl|CDD|183918 PRK13252, PRK13252, betaine aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 264 bits (677), Expect = 3e-78
Identities = 160/478 (33%), Positives = 239/478 (50%), Gaps = 17/478 (3%)
Query: 201 RVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPV 260
S +I G +V+ T +VINPAT EV + V T + + AV +AK+ W
Sbjct: 6 LQSLYIDGAYVEATSGETFEVINPATGEVLATVQAATPADVEAAVASAKQGQKIWAAMTA 65
Query: 261 ATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQR----DVLFGLEVVEQACAVATL 316
R RI+ + +++R D+LA +E T K Q D++ G +V+E +A
Sbjct: 66 MERSRILRRAVDILRERNDELA---ALETLDTGKPIQETSVVDIVTGADVLEYYAGLAPA 122
Query: 317 QIGEFVPNALCGLD-TYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEK 375
GE +P L G Y REPLGVCAGI +N+P W + A+ GN I KPSE
Sbjct: 123 LEGEQIP--LRGGSFVYTRREPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFKPSEV 180
Query: 376 NPGTSMILAALAMEAGLPDGVLNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYARA 435
P T++ LA + EAGLPDGV N+V G V + + DI +SF ++ A A
Sbjct: 181 TPLTALKLAEIYTEAGLPDGVFNVVQGDGRVGAWLTEHPDIAKVSFTGGVPTGKKVMAAA 240
Query: 436 AARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQ-- 493
AA K V GGK+ I+ DA +D + + A F ++G+ CT T VFV S++
Sbjct: 241 AASLKEVTMELGGKSPLIVFDDADLDRAADIAMLANFYSSGQVCTN-GTRVFVQKSIKAA 299
Query: 494 WEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVP 553
+E L+E + +++ D + + GP+VS +D++ I+ GA LL G +
Sbjct: 300 FEARLLERVERIRIGDPMDPATNFGPLVSFAHRDKVLGYIEKGKAEGARLLCGGERLTEG 359
Query: 554 GYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFT 613
G+ NG FV PT+ D T +M +EEIFGPV+ + D +E I N + A +FT
Sbjct: 360 GFANGAFVAPTVFTDCTDDMTIVREEIFGPVMSVLTFDDEDEVIARANDTEYGLAAGVFT 419
Query: 614 SSGLAARKFQNEIEARLVGINV----PVPSSFSSINESGEFNFCGKSGVQFYTQIKTV 667
+ A + +++EA + IN P +SG G + ++ YTQIK+V
Sbjct: 420 ADLSRAHRVIHQLEAGICWINTWGESPAEMPVGGYKQSGIGRENGIATLEHYTQIKSV 477
|
Length = 488 |
| >gnl|CDD|200131 TIGR01804, BADH, glycine betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 263 bits (673), Expect = 5e-78
Identities = 149/470 (31%), Positives = 235/470 (50%), Gaps = 12/470 (2%)
Query: 205 FIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQ 264
FI G++V+ T ++INPA EV + V T E+ + A+ AA+RA W R
Sbjct: 1 FIDGEYVEDSAGTTREIINPANGEVIATVHAATPEDVERAIAAARRAQGEWAAMSPMERG 60
Query: 265 RIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQR-DVLFGLEVVEQACAVATLQIGEFVP 323
RI+ + +LIR ++LA T++ G TL+ D+ G +V E +A GE +P
Sbjct: 61 RILRRAADLIRERNEELAKLETLDTGKTLQETIVADMDSGADVFEFFAGLAPALNGEIIP 120
Query: 324 NALCGLD-TYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMI 382
L G Y REPLGVC GI +N+P W + A+ GN + KPSE P T++
Sbjct: 121 --LGGPSFAYTIREPLGVCVGIGAWNYPLQIASWKIAPALAAGNAMVFKPSENTPLTALK 178
Query: 383 LAALAMEAGLPDGVLNIVHGTN-DVINHICDDEDIKAISFVASSTASVQMYARAAARGKR 441
+A + EAGLP GV N+V G +V + + D+ +SF ++ A AA K
Sbjct: 179 VAEIMEEAGLPKGVFNVVQGDGAEVGPLLVNHPDVAKVSFTGGVPTGKKIMAAAAGHLKH 238
Query: 442 VQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV--QWEDELV 499
V GGK+ I+ DA +++ ++ + F +AG+ C+ T VFV + ++ LV
Sbjct: 239 VTMELGGKSPLIVFDDADLESAVDGAMLGNFFSAGQVCSN-GTRVFVHKKIKERFLARLV 297
Query: 500 ELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGN 559
E + +K+ D + ++GP++S +D++ I+ GA+L G G +NG
Sbjct: 298 ERTERIKLGDPFDEATEMGPLISAAHRDKVLSYIEKGKAEGATLATGGGRPENVGLQNGF 357
Query: 560 FVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAA 619
FV PT+ D T +M +EEIFGPV+ + +E I N + +FT+ A
Sbjct: 358 FVEPTVFADCTDDMTIVREEIFGPVMTVLTFSDEDEVIARANDTEYGLAGGVFTADLGRA 417
Query: 620 RKFQNEIEARLVGINV----PVPSSFSSINESGEFNFCGKSGVQFYTQIK 665
+ +++EA V IN P + F +SG GK+ + YT++K
Sbjct: 418 HRVADQLEAGTVWINTYNLYPAEAPFGGYKQSGIGRENGKAALAHYTEVK 467
|
Under osmotic stress, betaine aldehyde dehydrogenase oxidizes glycine betaine aldehyde into the osmoprotectant glycine betaine, via the second of two oxidation steps from exogenously supplied choline or betaine aldehyde. This choline-glycine betaine synthesis pathway can be found in gram-positive and gram-negative bacteria. In Escherichia coli, betaine aldehyde dehydrogenase (betB) is osmotically co-induced with choline dehydrogenase (betA) in the presence of choline. These dehydrogenases are located in a betaine gene cluster with the upstream choline transporter (betT) and transcriptional regulator (betI). Similar to E.coli, betaine synthesis in Staphylococcus xylosus is also influenced by osmotic stress and the presence of choline with genes localized in a functionally equivalent gene cluster. Organization of the betaine gene cluster in Sinorhizobium meliloti and Bacillus subtilis differs from that of E.coli by the absence of upstream choline transporter and transcriptional regulator homologues. Additionally, B.subtilis co-expresses a type II alcohol dehydrogenase with betaine aldehyde dehydrogenase instead of choline dehydrogenase as in E.coli, St.xylosus, and Si.meliloti. Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171) [Cellular processes, Adaptations to atypical conditions]. Length = 467 |
| >gnl|CDD|143457 cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Score = 262 bits (673), Expect = 7e-78
Identities = 154/479 (32%), Positives = 233/479 (48%), Gaps = 27/479 (5%)
Query: 205 FIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAF--PAWKNTPVAT 262
FIGG++V GS TIDV++PAT+EV +VP T + AV AA+RAF W A
Sbjct: 2 FIGGRWVAPSGSETIDVVSPATEEVVGRVPEATPADVDAAVAAARRAFDNGPWPRLSPAE 61
Query: 263 RQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQR-DVLFGLEVVEQACAVA-TLQIGE 320
R ++ +L + + D+LA T E G + ++R ++ A+A E
Sbjct: 62 RAAVLRRLADALEARADELARLWTAENGMPISWSRRAQGPGPAALLRYYAALARDFPFEE 121
Query: 321 FVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTS 380
P + G REP+GV A I P+N P + A+ G T +LKPS + P +
Sbjct: 122 RRPGSGGG-HVLVRREPVGVVAAIVPWNAPLFLAALKIAPALAAGCTVVLKPSPETPLDA 180
Query: 381 MILAALAMEAGLPDGVLNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAARGK 440
+LA A EAGLP GV+N+V +V ++ + +SF S+ A ++ A R
Sbjct: 181 YLLAEAAEEAGLPPGVVNVVPADREVGEYLVRHPGVDKVSFTGSTAAGRRIAAVCGERLA 240
Query: 441 RVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWE--DEL 498
RV GGK+ AI++ DA +DA + LV A G+ C AL T + V S E + L
Sbjct: 241 RVTLELGGKSAAIVLDDADLDAAVPGLVPASLMNNGQVCVAL-TRILVPRSRYDEVVEAL 299
Query: 499 VELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENG 558
ALKV D + +GP+ S ++++ I GA L+ G G + G
Sbjct: 300 AAAVAALKVGDPLDPATQIGPLASARQRERVEGYIAKGRAEGARLVTGGG--RPAGLDRG 357
Query: 559 NFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSS--- 615
FV PT+ DV ++M +EEIFGPVL + D ++A+++ N + + S++T+
Sbjct: 358 WFVEPTLFADVDNDMRIAQEEIFGPVLSVIPYDDEDDAVRIANDSDYGLSGSVWTADVER 417
Query: 616 GLA-ARKFQNEIEARLVGINVPVP---SSFSSINESG---EFNFCGKSGVQFYTQIKTV 667
GLA AR+ I VG+N + F +SG E G G+ Y + K++
Sbjct: 418 GLAVARR----IRTGTVGVNGFRLDFGAPFGGFKQSGIGREG---GPEGLDAYLETKSI 469
|
The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. Length = 471 |
| >gnl|CDD|215157 PLN02278, PLN02278, succinic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 259 bits (664), Expect = 2e-76
Identities = 151/480 (31%), Positives = 232/480 (48%), Gaps = 24/480 (5%)
Query: 201 RVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPV 260
R IGGK+ D T V NPAT EV + VP E DA+ +A AFP+W
Sbjct: 24 RTQGLIGGKWTDAYDGKTFPVYNPATGEVIANVPCMGRAETNDAIASAHDAFPSWSKLTA 83
Query: 261 ATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGE 320
+ R +I+ + +LI + + LA +T+EQG LK A +V +G +E A G+
Sbjct: 84 SERSKILRRWYDLIIANKEDLAQLMTLEQGKPLKEAIGEVAYGASFLEYFAEEAKRVYGD 143
Query: 321 FVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMF----SIAVTCGNTFILKPSEKN 376
+P+ ++P+GV I P+NF PL M A+ G T ++KPSE
Sbjct: 144 IIPSPFPDRRLLVLKQPVGVVGAITPWNF----PLAMITRKVGPALAAGCTVVVKPSELT 199
Query: 377 PGTSMILAALAMEAGLPDGVLNIVHGTNDVINH-ICDDEDIKAISFVASSTASVQMYARA 435
P T++ A LA++AG+P GVLN+V G I + ++ I+F S+ ++ A A
Sbjct: 200 PLTALAAAELALQAGIPPGVLNVVMGDAPEIGDALLASPKVRKITFTGSTAVGKKLMAGA 259
Query: 436 AARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWE 495
AA KRV GG I+ DA +D + +++ F +G+ C + + V +
Sbjct: 260 AATVKRVSLELGGNAPFIVFDDADLDVAVKGALASKFRNSGQTCVC-ANRILVQEGI--Y 316
Query: 496 DELVE-LAKA---LKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIV 551
D+ E +KA L V G + GP+++ ++ +Q+AV GA +LL G+
Sbjct: 317 DKFAEAFSKAVQKLVVGDGFEEGVTQGPLINEAAVQKVESHVQDAVSKGAKVLLGGK--- 373
Query: 552 VPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASI 611
G F PT+L DVT +M ++EE+FGPV + + EEAI + N A I
Sbjct: 374 -RHSLGGTFYEPTVLGDVTEDMLIFREEVFGPVAPLTRFKTEEEAIAIANDTEAGLAAYI 432
Query: 612 FTSSGLAARKFQNEIEARLVGINVPVPSS----FSSINESGEFNFCGKSGVQFYTQIKTV 667
FT A + +E +VG+N + S+ F + +SG K G+ Y +IK V
Sbjct: 433 FTRDLQRAWRVSEALEYGIVGVNEGLISTEVAPFGGVKQSGLGREGSKYGIDEYLEIKYV 492
|
Length = 498 |
| >gnl|CDD|131352 TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 258 bits (660), Expect = 6e-76
Identities = 150/493 (30%), Positives = 233/493 (47%), Gaps = 28/493 (5%)
Query: 205 FIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQ 264
FI G+FV T + ++PAT EV V + A AAK AF W A R+
Sbjct: 4 FIDGEFVPSESGETFETLSPATNEVLGSVARGGAADVDRAAKAAKEAFKRWAELKAAERK 63
Query: 265 RIMFKLQELIRRDIDKLAMNITVEQGTTL----KAAQR---DVLFGLEVVEQACAVATLQ 317
R + K+ +LI + D++A+ ++ G L + R + F + E+A T
Sbjct: 64 RYLHKIADLIEQHADEIAVLECLDCGQPLRQTRQQVIRAAENFRFFADKCEEAMDGRTYP 123
Query: 318 IGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNP 377
+ + Y R P+G I P+N P M W + A+ GNT +LKP+E +P
Sbjct: 124 VDTHL--------NYTVRVPVGPVGLITPWNAPFMLSTWKIAPALAFGNTVVLKPAEWSP 175
Query: 378 GTSMILAALAMEAGLPDGVLNIVHGTNDVINH-ICDDEDIKAISFVASSTASVQMYARAA 436
T+ LA +A EAGLPDGV N+VHG + + D+KA+SF + + A
Sbjct: 176 LTAARLAEIAKEAGLPDGVFNLVHGFGEEAGKALVAHPDVKAVSFTGETATGSIIMRNGA 235
Query: 437 ARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV--QW 494
KR GGK+ I+ DA ++ L+A+V F GERCTA S+ + V S+ +
Sbjct: 236 DTLKRFSMELGGKSPVIVFDDADLERALDAVVFMIFSFNGERCTA-SSRLLVQESIAEDF 294
Query: 495 EDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNI--VV 552
++LVE +A++V D +VGP++ E ++ ++ A GA++L+ G
Sbjct: 295 VEKLVERVRAIRVGHPLDPETEVGPLIHPEHLAKVLGYVEAAEKEGATILVGGERAPTFR 354
Query: 553 PGYEN-GNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASI 611
GN+V PT+ ++M +EEIFGPVL + EEAI+ N R+ +
Sbjct: 355 GEDLGRGNYVLPTVFTGADNHMRIAQEEIFGPVLTVIPFKDEEEAIEKANDTRYGLAGYV 414
Query: 612 FTSSGLAARKFQNEIEARLVGINVP----VPSSFSSINESGEFNFCGKSGVQFYTQIKTV 667
+T+ A + +EA ++ +N +P+ F + SG G FYT+ K V
Sbjct: 415 WTNDVGRAHRVALALEAGMIWVNSQNVRHLPTPFGGVKASGIGREGGTYSFDFYTETKNV 474
Query: 668 AQQWND--LPKLG 678
A +PK G
Sbjct: 475 ALALGPHHIPKFG 487
|
This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. Length = 488 |
| >gnl|CDD|143463 cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 256 bits (657), Expect = 7e-76
Identities = 141/428 (32%), Positives = 224/428 (52%), Gaps = 24/428 (5%)
Query: 219 IDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDI 278
I+V NPA EV VP + EE ++A++ A++A N P R +I+ K+ ELI R
Sbjct: 1 IEVRNPANGEVIDTVPSLSREEVREAIEVAEKAKDVMSNLPAYKRYKILMKVAELIERRK 60
Query: 279 DKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCF---- 334
++LA +T+E G +K ++ +V + + + A A + GE +P +D Y +
Sbjct: 61 EELAKLLTIEVGKPIKQSRVEVERTIRLFKLAAEEAKVLRGETIP-----VDAYEYNERR 115
Query: 335 -----REPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAME 389
REP+GV I PFNFP + A+ GN+ ++KPS P T++ LA + E
Sbjct: 116 IAFTVREPIGVVGAITPFNFPANLFAHKIAPAIAVGNSVVVKPSSNTPLTAIELAKILEE 175
Query: 390 AGLPDGVLNIVHGTNDVI-NHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGG 448
AGLP GV+N+V G + + I + + ISF S+ + + ++A GK+V GG
Sbjct: 176 AGLPPGVINVVTGYGSEVGDEIVTNPKVNMISFTGSTAVGLLIASKAGGTGKKVALELGG 235
Query: 449 KNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV--QWEDELVELAKALK 506
+ I++ DA ++ ++ V F AG+ C A+ + V V ++ LVE K LK
Sbjct: 236 SDPMIVLKDADLERAVSIAVRGRFENAGQVCNAVKR-ILVEEEVYDKFLKLLVEKVKKLK 294
Query: 507 VNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTIL 566
V D S D+GP++S E +++ L+ +AV+ G +L G+ G+F PT+L
Sbjct: 295 VGDPLDESTDLGPLISPEAVERMENLVNDAVEKGGKILYGGKRD------EGSFFPPTVL 348
Query: 567 RDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEI 626
+ T +M KEE+FGPVL + EEA+++ N + AS+FT+ A K E+
Sbjct: 349 ENDTPDMIVMKEEVFGPVLPIAKVKDDEEAVEIANSTEYGLQASVFTNDINRALKVAREL 408
Query: 627 EARLVGIN 634
EA V IN
Sbjct: 409 EAGGVVIN 416
|
NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. Length = 456 |
| >gnl|CDD|143467 cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Score = 252 bits (646), Expect = 2e-74
Identities = 143/466 (30%), Positives = 227/466 (48%), Gaps = 32/466 (6%)
Query: 219 IDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDI 278
I+VI+P EV +VP+ + E+ + A+ AAK K+ P R I+ + +L+
Sbjct: 1 IEVISPYDGEVIGRVPVASEEDVEKAIAAAKEGAKEMKSLPAYERAEILERAAQLLEERR 60
Query: 279 DKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVP-NALCGLD---TYCF 334
++ A I +E G +K A+++V +E + + A GE +P +A G + +
Sbjct: 61 EEFARTIALEAGKPIKDARKEVDRAIETLRLSAEEAKRLAGETIPFDASPGGEGRIGFTI 120
Query: 335 REPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPD 394
REP+GV A I PFNFP A+ GN +LKP+ + P +++ LA L +EAGLP
Sbjct: 121 REPIGVVAAITPFNFPLNLVAHKVGPAIAAGNAVVLKPASQTPLSALKLAELLLEAGLPK 180
Query: 395 GVLNIVHGTNDVI-NHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAI 453
G LN+V G+ + + + + D ++ ISF S + AR A K+V G I
Sbjct: 181 GALNVVTGSGETVGDALVTDPRVRMISFTGSPAVGEAI-ARKAGL-KKVTLELGSNAAVI 238
Query: 454 IMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWE--DELVELAKALKVNVGT 511
+ DA ++ + VS F AG+ C ++ +FV + E + V K L V
Sbjct: 239 VDADADLEKAVERCVSGAFANAGQVCISVQR-IFVHEDIYDEFLERFVAATKKLVVGDPL 297
Query: 512 DASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTS 571
D DVGP++S ++I ++ AV+ GA LL G +G + PT+L DV
Sbjct: 298 DEDTDVGPMISEAEAERIEEWVEEAVEGGARLLT-------GGKRDGAILEPTVLTDVPP 350
Query: 572 NMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLV 631
+M+ EE+F PV+ D+L+EAI M N + + A +FT+ A K E+E V
Sbjct: 351 DMKVVCEEVFAPVVSLNPFDTLDEAIAMANDSPYGLQAGVFTNDLQKALKAARELEVGGV 410
Query: 632 GINVPVPS------SFSSINESGEFNFCGKSGVQF----YTQIKTV 667
IN + + + ESG G+ G ++ T+IK V
Sbjct: 411 MIN-DSSTFRVDHMPYGGVKESG----TGREGPRYAIEEMTEIKLV 451
|
Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 453 |
| >gnl|CDD|143413 cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins | Back alignment and domain information |
|---|
Score = 248 bits (636), Expect = 5e-73
Identities = 147/468 (31%), Positives = 226/468 (48%), Gaps = 36/468 (7%)
Query: 219 IDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDI 278
+DV NP EV +VP + ++A+ A+ + P R I+ + +L+++
Sbjct: 1 LDVHNPYDGEVIGKVPADDRADAEEALATARAGAENRRALPPHERMAILERAADLLKKRA 60
Query: 279 DKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVP-NALCGLDT---YCF 334
++ A I E G +K A+ +V ++ + A A GE +P +A G D +
Sbjct: 61 EEFAKIIACEGGKPIKDARVEVDRAIDTLRLAAEEAERIRGEEIPLDATQGSDNRLAWTI 120
Query: 335 REPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPD 394
REP+GV I PFNFP + A+ G +LKP+ K P +++ LA + +EAG+P+
Sbjct: 121 REPVGVVLAITPFNFPLNLVAHKLAPAIATGCPVVLKPASKTPLSALELAKILVEAGVPE 180
Query: 395 GVLNIVHGTN-DVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAI 453
GVL +V G + + DE + +SF S A+V RA A GKR+ GG I
Sbjct: 181 GVLQVVTGEREVLGDAFAADERVAMLSFTGS--AAVGEALRANAGGKRIALELGGNAPVI 238
Query: 454 IMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWE--DELVELAKALKVNVGT 511
+ DA +DA + AL GF AG+ C ++ ++V + E + V K LKV
Sbjct: 239 VDRDADLDAAIEALAKGGFYHAGQVCISVQR-IYVHEELYDEFIEAFVAAVKKLKVGDPL 297
Query: 512 DASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTS 571
D DVGP++S E +++ R ++ AV+ GA LL G +G PT+L DV
Sbjct: 298 DEDTDVGPLISEEAAERVERWVEEAVEAGARLLCG-------GERDGALFKPTVLEDVPR 350
Query: 572 NMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLV 631
+ + EE FGPV+ ++ D EEAI++ N + A IFT A K ++E V
Sbjct: 351 DTKLSTEETFGPVVPIIRYDDFEEAIRIANSTDYGLQAGIFTRDLNVAFKAAEKLEVGGV 410
Query: 632 GINVPVPSS--------FSSINESGEFNFCGKSGVQF----YTQIKTV 667
+N SS F + ESG G+ GV + T+ KTV
Sbjct: 411 MVN---DSSAFRTDWMPFGGVKESG----VGREGVPYAMEEMTEEKTV 451
|
ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. Length = 453 |
| >gnl|CDD|143436 cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbosone dehydrogenase-like | Back alignment and domain information |
|---|
Score = 247 bits (633), Expect = 1e-72
Identities = 145/459 (31%), Positives = 222/459 (48%), Gaps = 21/459 (4%)
Query: 222 INPATQEVGSQVPLTTYEEFKDAVDAAKRAFPA--WKNTPVATRQRIMFKLQELIRRDID 279
+PA V ++ T E+ AV AA++AF W A R ++ K+ +LIR +
Sbjct: 2 RSPAHGVVVARYAEGTVEDVDAAVAAARKAFDKGPWPRMSGAERAAVLLKVADLIRARRE 61
Query: 280 KLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLG 339
+LA+ T+E G + A+ ++ ++ A ++A G+ N + REP+G
Sbjct: 62 RLALIETLESGKPISQARGEIEGAADLWRYAASLARTLHGDSYNNLGDDMLGLVLREPIG 121
Query: 340 VCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNI 399
V I P+NFP + A+ G T ++KPSE GT+++LA L +EAGLP GV+NI
Sbjct: 122 VVGIITPWNFPFLILSQKLPFALAAGCTVVVKPSEFTSGTTLMLAELLIEAGLPAGVVNI 181
Query: 400 VHGTNDVI-NHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMPDA 458
V G + + + D+ +SF S+ + A AA K+V GGKN I+ DA
Sbjct: 182 VTGYGATVGQAMTEHPDVDMVSFTGSTRVGKAIAAAAARNLKKVSLELGGKNPQIVFADA 241
Query: 459 SIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWEDELVELAKAL--KVNVGT--DAS 514
+DA +A+V + AGE C + S + V S+ D V A KV VG D
Sbjct: 242 DLDAAADAVVFGVYFNAGECCNSGSR-LLVHESI--ADAFVAAVVARSRKVRVGDPLDPE 298
Query: 515 ADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNME 574
VG +++ +I+ + GA+LLL G + G F PTI DVT +M
Sbjct: 299 TKVGAIINEAQLAKITDYVDAGRAEGATLLLGGERL---ASAAGLFYQPTIFTDVTPDMA 355
Query: 575 CYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGIN 634
+EEIFGPVL + D+++EAI + N + A +++ A I A V +N
Sbjct: 356 IAREEIFGPVLSVLTFDTVDEAIALANDTVYGLSAGVWSKDIDTALTVARRIRAGTVWVN 415
Query: 635 ------VPVPSSFSSINESGEFNFCGKSGVQFYTQIKTV 667
+P F +SG G+ GV+ YT++KTV
Sbjct: 416 TFLDGSPELP--FGGFKQSGIGRELGRYGVEEYTELKTV 452
|
Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. Length = 454 |
| >gnl|CDD|143427 cd07109, ALDH_AAS00426, Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like | Back alignment and domain information |
|---|
Score = 247 bits (632), Expect = 2e-72
Identities = 152/464 (32%), Positives = 224/464 (48%), Gaps = 27/464 (5%)
Query: 221 VINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPA-WKNTPVATRQRIMFKLQELIRRDID 279
V +P+T EV +++ + AV AA+RAF + W A R R++ ++ LIR D
Sbjct: 1 VFDPSTGEVFARIARGGAADVDRAVQAARRAFESGWLRLSPAERGRLLLRIARLIREHAD 60
Query: 280 KLAMNITVEQGTTLKAAQRDVLFGLEVVE-QACAVATLQIGEFVPNALCGLDTYCFREPL 338
+LA +++ G L A+ DV E A L GE +P G Y REP
Sbjct: 61 ELARLESLDTGKPLTQARADVEAAARYFEYYGGAADKLH-GETIP-LGPGYFVYTVREPH 118
Query: 339 GVCAGICPFNFPDMTPLWMF--SI--AVTCGNTFILKPSEKNPGTSMILAALAMEAGLPD 394
GV I P+N+P L + S+ A+ GN ++KP+E P T++ LA LA EAGLP
Sbjct: 119 GVTGHIIPWNYP----LQITGRSVAPALAAGNAVVVKPAEDAPLTALRLAELAEEAGLPA 174
Query: 395 GVLNIVHGT-NDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAI 453
G LN+V G + + + ISF S + + AA V GGK+ I
Sbjct: 175 GALNVVTGLGAEAGAALVAHPGVDHISFTGSVETGIAVMRAAAENVVPVTLELGGKSPQI 234
Query: 454 IMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWE--DELVELAKALKVNVGT 511
+ DA ++A L +V+A AG+ C+A S + V S+ E + LVE +AL+V G
Sbjct: 235 VFADADLEAALPVVVNAIIQNAGQTCSAGSR-LLVHRSIYDEVLERLVERFRALRVGPGL 293
Query: 512 DASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTS 571
+ D+GP++S + D++ + A GA ++ GR I G FV PT+L DV
Sbjct: 294 E-DPDLGPLISAKQLDRVEGFVARARARGARIVAGGR-IAEGAPAGGYFVAPTLLDDVPP 351
Query: 572 NMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLV 631
+ +EEIFGPVL M D EAI + N + A ++T G A + + A V
Sbjct: 352 DSRLAQEEIFGPVLAVMPFDDEAEAIALANGTDYGLVAGVWTRDGDRALRVARRLRAGQV 411
Query: 632 GIN-------VPVPSSFSSINESGEFNFCGKSGVQFYTQIKTVA 668
+N + +P F + +SG G + YTQ KTVA
Sbjct: 412 FVNNYGAGGGIELP--FGGVKKSGHGREKGLEALYNYTQTKTVA 453
|
Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. Length = 454 |
| >gnl|CDD|143433 cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 246 bits (631), Expect = 3e-72
Identities = 151/460 (32%), Positives = 228/460 (49%), Gaps = 24/460 (5%)
Query: 221 VINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDK 280
+NPAT E+ ++V + E+ AV AA+ AF AW A R RI+++L ELI + D+
Sbjct: 1 TLNPATGELIARVAQASAEDVDAAVAAARAAFEAWSAMDPAERGRILWRLAELILANADE 60
Query: 281 LAMNITVEQGTTLKAAQR-DVLFGLEVVEQACAVATLQIGEFVP---NALCGLDTYCFRE 336
LA +++ G ++AA+R DV + A GE +P L Y RE
Sbjct: 61 LARLESLDTGKPIRAARRLDVPRAADTFRYYAGWADKIEGEVIPVRGPFL----NYTVRE 116
Query: 337 PLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGV 396
P+GV I P+NFP M W + A+ GNT +LKP+E P +++ +A L EAG P GV
Sbjct: 117 PVGVVGAIVPWNFPLMFAAWKVAPALAAGNTVVLKPAELTPLSALRIAELMAEAGFPAGV 176
Query: 397 LNIVHGTNDVI-NHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIM 455
LN+V G +V + + D+ I+F S+ ++ AA KRV GGK+ I+
Sbjct: 177 LNVVTGFGEVAGAALVEHPDVDKITFTGSTAVGRKIMQGAAGNLKRVSLELGGKSANIVF 236
Query: 456 PDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWEDELVE----LAKALKVNVGT 511
DA +DA + A + F G+ CTA S + V S+ DE +E LA++L+
Sbjct: 237 ADADLDAAVRAAATGIFYNQGQMCTAGSR-LLVHESIY--DEFLERFTSLARSLRPGDPL 293
Query: 512 DASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTS 571
D +GP+VS D++ + + GA LL G+ G+ FV PTI V
Sbjct: 294 DPKTQMGPLVSQAQFDRVLDYVDVGREEGARLLTGGKRPGARGF----FVEPTIFAAVPP 349
Query: 572 NMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLV 631
M +EEIFGPV+ M+ EEA+++ N + A ++T A + ++A V
Sbjct: 350 EMRIAQEEIFGPVVSVMRFRDEEEALRIANGTEYGLAAGVWTRDLGRAHRVAAALKAGTV 409
Query: 632 GIN----VPVPSSFSSINESGEFNFCGKSGVQFYTQIKTV 667
IN S F +SG G+ + YT++K+V
Sbjct: 410 WINTYNRFDPGSPFGGYKQSGFGREMGREALDEYTEVKSV 449
|
4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. Length = 453 |
| >gnl|CDD|143431 cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like | Back alignment and domain information |
|---|
Score = 247 bits (632), Expect = 4e-72
Identities = 154/488 (31%), Positives = 242/488 (49%), Gaps = 42/488 (8%)
Query: 205 FIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAF-PAWKNTPVATR 263
FI G+ V + +D+ NPAT++V + V T + AV +A RAF AW T A R
Sbjct: 3 FIDGRPVAGQSEKRLDITNPATEQVIASVASATEADVDAAVASAWRAFVSAWAKTTPAER 62
Query: 264 QRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQA------CAVATLQ 317
RI+ +L +LI + ++LA T+ G ++ ++ EV + A AT
Sbjct: 63 GRILLRLADLIEQHGEELAQLETLCSGKSIHLSR-----AFEVGQSANFLRYFAGWATKI 117
Query: 318 IGEFVPNALCGLD-----TYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKP 372
GE + ++ + + REP+GV AGI P+NF M +W A+ G T ++KP
Sbjct: 118 NGETLAPSIPSMQGERYTAFTRREPVGVVAGIVPWNFSVMIAVWKIGAALATGCTIVIKP 177
Query: 373 SEKNPGTSMILAALAMEAGLPDGVLNIVHGTNDVINHICDDEDIKAISFVASSTASVQMY 432
SE P T + +A LA EAG+PDGVLN+V+G V + D+ +SF S ++
Sbjct: 178 SEFTPLTLLRVAELAKEAGIPDGVLNVVNGKGAVGAQLISHPDVAKVSFTGSVATGKKIG 237
Query: 433 ARAAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV 492
+AA+ RV GGKN A + DA ID + L++AGF G+ C A +V S
Sbjct: 238 RQAASDLTRVTLELGGKNAAAFLKDADIDWVVEGLLTAGFLHQGQVCAA-PERFYVHRSK 296
Query: 493 QWEDELVELAK----ALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGR 548
DELV K + +V D S GP+ + D++ + +A G ++ G
Sbjct: 297 F--DELVTKLKQALSSFQVGSPMDESVMFGPLANQPHFDKVCSYLDDARAEGDEIVRGGE 354
Query: 549 NIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNG 608
+ GY FV PT++ +++ +EE FGPV+ + + EE I+++N F
Sbjct: 355 ALAGEGY----FVQPTLVLARSADSRLMREETFGPVVSFVPYEDEEELIQLINDTPFGLT 410
Query: 609 ASIFTSSGLAARKFQNEIEARLVGINV------PVPSSFSSINESG---EFNFCGKSGVQ 659
AS++T++ A ++ IEA V +N+ VP F + +SG EF G + +
Sbjct: 411 ASVWTNNLSKALRYIPRIEAGTVWVNMHTFLDPAVP--FGGMKQSGIGREF---GSAFID 465
Query: 660 FYTQIKTV 667
YT++K+V
Sbjct: 466 DYTELKSV 473
|
NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. Length = 477 |
| >gnl|CDD|188167 TIGR01780, SSADH, succinate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 243 bits (623), Expect = 3e-71
Identities = 137/463 (29%), Positives = 224/463 (48%), Gaps = 33/463 (7%)
Query: 221 VINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDK 280
V NPAT E+ VP +E + A+ AA AF W+ T R ++ K L+ + D
Sbjct: 1 VYNPATGEIIGSVPDQGVDETEAAIRAAYEAFKTWRATTAKERSSLLRKWYNLMMENKDD 60
Query: 281 LAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGV 340
LA IT+E G LK A+ ++L+ +E A G+ +P+ ++P+GV
Sbjct: 61 LARLITLENGKPLKEAKGEILYAASFLEWFAEEAKRVYGDTIPSPQSDKRLIVIKQPVGV 120
Query: 341 CAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIV 400
CA I P+NFP A+ G T ++KP+E+ P +++ LA LA +AG+P GVLN++
Sbjct: 121 CAAITPWNFPAAMITRKAGAALAAGCTVVVKPAEQTPLSALALARLAEQAGIPKGVLNVI 180
Query: 401 --HGTNDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMPDA 458
+V N + ++ ISF S+ + ++A+ K+V GG I+ DA
Sbjct: 181 TGSRAKEVGNVLTTSPLVRKISFTGSTNVGKILMKQSASTVKKVSMELGGNAPFIVFDDA 240
Query: 459 SIDATLNALVSAGFGAAGERCTALSTAVFVGSSV--QWEDELVELAKALKVNVGTDASAD 516
+D + +++ F AG+ C + ++V + ++ +L E K LKV G D
Sbjct: 241 DLDQAVEGAMASKFRNAGQTCVC-ANRLYVHDGIYDEFAKKLAEAVKKLKVGNGLDEGVT 299
Query: 517 VGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECY 576
GP+++ + +++ + I +AV+ GA ++ G+ GNF PT+L +VT++M
Sbjct: 300 QGPLINEKAVEKVEKHIADAVEKGAKVVTGGKR----HELGGNFFEPTVLSNVTADMLVS 355
Query: 577 KEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQN----------EI 626
KEE FGP+ + D EE I + N T GLAA F +
Sbjct: 356 KEETFGPLAPVFKFDDEEEVIAIAND----------TEVGLAAYFFSRDLSRIWRVAEAL 405
Query: 627 EARLVGINVPVPSS----FSSINESGEFNFCGKSGVQFYTQIK 665
E +VGIN + S+ F + +SG K G++ Y + K
Sbjct: 406 EYGMVGINTGLISNVVAPFGGVKQSGLGREGSKYGIEEYLETK 448
|
Succinic semialdehyde dehydrogenase is one of three enzymes constituting 4-aminobutyrate (GABA) degradation in both prokaryotes and eukaryotes, catalyzing the (NAD(P)+)-dependent catabolism reaction of succinic semialdehyde to succinate for metabolism by the citric acid cycle. The EC number depends on the cofactor: 1.2.1.24 for NAD only, 1.2.1.79 for NADP only, and 1.2.1.16 if both can be used. In Escherichia coli, succinic semialdehyde dehydrogenase is located in an unidirectionally transcribed gene cluster encoding enzymes for GABA degradation and is suggested to be cotranscribed with succinic semialdehyde transaminase from a common promoter upstream of SSADH. Similar gene arrangements can be found in characterized Ralstonia eutropha and the genome analysis of Bacillus subtilis. Prokaryotic succinic semialdehyde dehydrogenases (1.2.1.16) share high sequence homology to characterized succinic semialdehyde dehydrogenases from rat and human (1.2.1.24), exhibiting conservation of proposed cofactor binding residues, and putative active sites (G-237 & G-242, C-293 & G-259 respectively of rat SSADH). Eukaryotic SSADH enzymes exclusively utilize NAD+ as a cofactor, exhibiting little to no NADP+ activity. While a NADP+ preference has been detected in prokaryotes in addition to both NADP+- and NAD+-dependencies as in E.coli, Pseudomonas, and Klebsiella pneumoniae. The function of this alternative SSADH currently is unknown, but has been suggested to play a possible role in 4-hydroxyphenylacetic degradation. Just outside the scope of this model, are several sequences belonging to clades scoring between trusted and noise. These sequences may be actual SSADH enzymes, but lack sufficiently close characterized homologs to make a definitive assignment at this time. SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070) [Central intermediary metabolism, Other]. Length = 448 |
| >gnl|CDD|143411 cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like | Back alignment and domain information |
|---|
Score = 244 bits (624), Expect = 3e-71
Identities = 151/466 (32%), Positives = 234/466 (50%), Gaps = 37/466 (7%)
Query: 221 VINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDK 280
V++PAT E + VP + + AV AA AFP+W+ T A R + + KL + I + ++
Sbjct: 1 VVDPATGEEIATVPDASAADVDAAVAAAHAAFPSWRRTTPAERSKALLKLADAIEENAEE 60
Query: 281 LAMNITVEQGTTLKAAQRDVLFGLEVVEQ----ACAVATLQ---IGEFVPNALCGLDTYC 333
LA + G L + D L G V+ A A TL+ GE++P G +
Sbjct: 61 LAALESRNTGKPLHLVRDDELPG--AVDNFRFFAGAARTLEGPAAGEYLP----GHTSMI 114
Query: 334 FREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLP 393
REP+GV A I P+N+P M W + A+ GNT +LKPSE P T+++LA LA E LP
Sbjct: 115 RREPIGVVAQIAPWNYPLMMAAWKIAPALAAGNTVVLKPSETTPLTTLLLAELAAE-VLP 173
Query: 394 DGVLNIVHGTNDVI-NHICDDEDIKAISFVASSTASVQMYARAAARG-KRVQSNRGGKNY 451
GV+N+V G + + ++ +S S + + ARAAA KRV GGK
Sbjct: 174 PGVVNVVCGGGASAGDALVAHPRVRMVSLTG-SVRTGKKVARAAADTLKRVHLELGGKAP 232
Query: 452 AIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWE--DELVELAKALKVNV 509
I+ DA +DA + + +AG+ AG+ CTA + V+V SV E LVE A++V
Sbjct: 233 VIVFDDADLDAAVAGIATAGYYNAGQDCTA-ACRVYVHESVYDEFVAALVEAVSAIRVGD 291
Query: 510 GTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDV 569
D ++GP+ S +++++ ++ A A +L GR PGY F PT++ V
Sbjct: 292 PDDEDTEMGPLNSAAQRERVAGFVERA-PAHARVLTGGRRAEGPGY----FYEPTVVAGV 346
Query: 570 TSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEAR 629
+ E +EEIFGPV+ D +EAI++ N + +S++T A + ++
Sbjct: 347 AQDDEIVQEEIFGPVVTVQPFDDEDEAIELANDVEYGLASSVWTRDVGRAMRLSARLDFG 406
Query: 630 LVGIN--VPVPSS--FSSINESGEFNFCGKS----GVQFYTQIKTV 667
V +N +P+ + +SG GK ++ YT+IK V
Sbjct: 407 TVWVNTHIPLAAEMPHGGFKQSGY----GKDLSIYALEDYTRIKHV 448
|
NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. Length = 450 |
| >gnl|CDD|143423 cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogenase, DoxF-like | Back alignment and domain information |
|---|
Score = 242 bits (620), Expect = 6e-71
Identities = 136/442 (30%), Positives = 218/442 (49%), Gaps = 32/442 (7%)
Query: 243 DAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLF 302
AV+AA AFPAW TP + R+ I+ K +L+ D+ + E G T A +V
Sbjct: 4 QAVEAAAAAFPAWSKTPPSERRDILLKAADLLESRRDEFIEAMMEETGATAAWAGFNVDL 63
Query: 303 GLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIA- 361
++ +A ++ T IG +P+ G +EP+GV GI P+N P + L +IA
Sbjct: 64 AAGMLREAASLITQIIGGSIPSDKPGTLAMVVKEPVGVVLGIAPWNAPVI--LGTRAIAY 121
Query: 362 -VTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVH----GTNDVINHICDDEDI 416
+ GNT +LK SE +P T ++ + EAGLP GVLN+V +V+ + +
Sbjct: 122 PLAAGNTVVLKASELSPRTHWLIGRVFHEAGLPKGVLNVVTHSPEDAPEVVEALIAHPAV 181
Query: 417 KAISFVASSTASVQMYARAAARG-KRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAA 475
+ ++F S T ++ A AA+ K V GGK AI++ DA +DA NA + F +
Sbjct: 182 RKVNFTGS-TRVGRIIAETAAKHLKPVLLELGGKAPAIVLEDADLDAAANAALFGAFLNS 240
Query: 476 GERCTALSTA-VFVGSSV--QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRL 532
G+ C +ST + V S+ ++ ++L A+ L +G +VS D++ L
Sbjct: 241 GQIC--MSTERIIVHESIADEFVEKLKAAAEKL-----FAGPVVLGSLVSAAAADRVKEL 293
Query: 533 IQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADS 592
+ +A+ GA L++ G P G + PTIL +VT +M+ Y EE FGPV+ ++
Sbjct: 294 VDDALSKGAKLVVGGLADESPS---GTSMPPTILDNVTPDMDIYSEESFGPVVSIIRVKD 350
Query: 593 LEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVP-------VPSSFSSIN 645
EEA+++ N + + A++FT A IE+ V IN +P +
Sbjct: 351 EEEAVRIANDSEYGLSAAVFTRDLARALAVAKRIESGAVHINGMTVHDEPTLP--HGGVK 408
Query: 646 ESGEFNFCGKSGVQFYTQIKTV 667
SG F GK G+ +T+ K +
Sbjct: 409 SSGYGRFNGKWGIDEFTETKWI 430
|
Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. Length = 432 |
| >gnl|CDD|143462 cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like | Back alignment and domain information |
|---|
Score = 243 bits (622), Expect = 9e-71
Identities = 151/477 (31%), Positives = 224/477 (46%), Gaps = 21/477 (4%)
Query: 205 FIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWK-NTPVATR 263
FI +FV TI +NP+T EV + V E+ AV AA++AF +W R
Sbjct: 11 FINNEFVKSSDGETIKTVNPSTGEVIASVYAAGEEDVDKAVKAARKAFESWWSKVTGEER 70
Query: 264 QRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQI-GEFV 322
++ KL +L+ ++ D LA ++ G + L + V + A +I G+ +
Sbjct: 71 GELLDKLADLVEKNRDLLAAIEALDSGKPYHSNALGDLDEIIAVIRYYAGWADKIQGKTI 130
Query: 323 PNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMI 382
P + L Y EP GVC I P+N+P W + A+ GNT ++KP+E P + +
Sbjct: 131 PTSPNKL-AYTLHEPYGVCGQIIPWNYPLAMAAWKLAPALAAGNTVVIKPAENTPLSLLY 189
Query: 383 LAALAMEAGLPDGVLNIVHGTNDVI-NHICDDEDIKAISFVASSTASVQMYARAAARGKR 441
A L EAG P GV+NI+ G V + + + D+ I+F S+ + AA K
Sbjct: 190 FANLVKEAGFPPGVVNIIPGYGAVAGSALAEHPDVDKIAFTGSTATGRLVMKAAAQNLKA 249
Query: 442 VQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWEDELVEL 501
V GGK+ A++ DA +D + + +G+ CTA S ++V S+ D+ VE
Sbjct: 250 VTLECGGKSPALVFEDADLDQAVKWAAAGIMYNSGQNCTATSR-IYVQESIY--DKFVEK 306
Query: 502 -----AKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYE 556
+ KV D VGP VS D++ I+ GA L+ G G
Sbjct: 307 FVEHVKQNYKVGSPFDDDTVVGPQVSKTQYDRVLSYIEKGKKEGAKLVYGG-EKAPEGLG 365
Query: 557 NGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSG 616
G F+ PTI DV +M KEEIFGPV++ + + EEAIK N + A++FT
Sbjct: 366 KGYFIPPTIFTDVPQDMRIVKEEIFGPVVVISKFKTYEEAIKKANDTTYGLAAAVFTKDI 425
Query: 617 LAARKFQNEIEARLVGIN------VPVPSSFSSINESGEFNFCGKSGVQFYTQIKTV 667
A + E+EA +V IN V VP F SG G+ G++ YTQ K V
Sbjct: 426 RRAHRVARELEAGMVWINSSNDSDVGVP--FGGFKMSGIGRELGEYGLETYTQTKAV 480
|
NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. Length = 484 |
| >gnl|CDD|143401 cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11 | Back alignment and domain information |
|---|
Score = 242 bits (619), Expect = 2e-70
Identities = 139/441 (31%), Positives = 215/441 (48%), Gaps = 22/441 (4%)
Query: 204 NFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNT-PVAT 262
I G++ + G TI+V +P EV VP + E +A + A A W T P+
Sbjct: 4 YLINGEWKESSGK-TIEVYSPIDGEVIGSVPALSALEILEAAETAYDAGRGWWPTMPLEE 62
Query: 263 RQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFV 322
R + K +L++ + +++A + E G TLK A ++V ++ + G+ +
Sbjct: 63 RIDCLHKFADLLKENKEEVANLLMWEIGKTLKDALKEVDRTIDYIRDTIEELKRLDGDSL 122
Query: 323 P--NALCGLDTYCF--REPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPG 378
P REPLGV I PFN+P + A+ GNT + KP+ +
Sbjct: 123 PGDWFPGTKGKIAQVRREPLGVVLAIGPFNYPLNLTVSKLIPALIMGNTVVFKPATQGVL 182
Query: 379 TSMILAALAMEAGLPDGVLNIVHGT-NDVINHICDDEDIKAISFVASSTASVQMYARAAA 437
+ LA +AG P GV+N+V G ++ + + I ISF S+ ++ +
Sbjct: 183 LGIPLAEAFHDAGFPKGVVNVVTGRGREIGDPLVTHGRIDVISFTGSTEVGNRL-KKQHP 241
Query: 438 RGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWEDE 497
KR+ GGK+ AI++PDA ++ +V +G+RCTA+ V V SV DE
Sbjct: 242 M-KRLVLELGGKDPAIVLPDADLELAAKEIVKGALSYSGQRCTAIKR-VLVHESVA--DE 297
Query: 498 LVELAKA----LKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVP 553
LVEL K LKV + D D+ P++ + D + LI +AV GA++L G
Sbjct: 298 LVELLKEEVAKLKVGMPWDNGVDITPLIDPKSADFVEGLIDDAVAKGATVLNGG------ 351
Query: 554 GYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFT 613
G E GN + PT+L VT +M EE FGPVL ++ + +EEAI++ N++ + ASIFT
Sbjct: 352 GREGGNLIYPTLLDPVTPDMRLAWEEPFGPVLPIIRVNDIEEAIELANKSNYGLQASIFT 411
Query: 614 SSGLAARKFQNEIEARLVGIN 634
ARK + +E V IN
Sbjct: 412 KDINKARKLADALEVGTVNIN 432
|
NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. Length = 473 |
| >gnl|CDD|143408 cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins | Back alignment and domain information |
|---|
Score = 239 bits (612), Expect = 2e-69
Identities = 141/463 (30%), Positives = 220/463 (47%), Gaps = 20/463 (4%)
Query: 221 VINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWK-NTPVATRQRIMFKLQELIRRDID 279
VINPAT+EV P + A+ AA+RAF +T R R + +L E + +
Sbjct: 1 VINPATEEVIGTAPDAGAADVDAAIAAARRAFDTGDWSTDAEERARCLRQLHEALEARKE 60
Query: 280 KLAMNITVEQGTTLKAAQR-DVLFGLEVVEQACAVATLQIGEF--VPNALCGLDTYCF-- 334
+L + E G + A+ V + + +A EF AL G
Sbjct: 61 ELRALLVAEVGAPVMTARAMQVDGPIGHLRYFADLADSFPWEFDLPVPALRGGPGRRVVR 120
Query: 335 REPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPD 394
REP+GV A I P+NFP L + A+ GNT +LKP+ P ++++L + E LP
Sbjct: 121 REPVGVVAAITPWNFPFFLNLAKLAPALAAGNTVVLKPAPDTPLSALLLGEIIAETDLPA 180
Query: 395 GVLNIVHGT-NDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAI 453
GV+N+V G+ N V + D + +SF S+ ++ A+AAA KRV GGK+ I
Sbjct: 181 GVVNVVTGSDNAVGEALTTDPRVDMVSFTGSTAVGRRIMAQAAATLKRVLLELGGKSANI 240
Query: 454 IMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWEDELVELAKAL--KVNVG- 510
++ DA + A A V AG+ C AL+T + V S DE+VE A + VG
Sbjct: 241 VLDDADLAAAAPAAVGVCMHNAGQGC-ALTTRLLVPRSRY--DEVVEALAAAFEALPVGD 297
Query: 511 -TDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDV 569
D +GP++S +D++ I D GA L+ G G + G +V PT+ DV
Sbjct: 298 PADPGTVMGPLISAAQRDRVEGYIARGRDEGARLVTGGGR--PAGLDKGFYVEPTLFADV 355
Query: 570 TSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEAR 629
++M +EEIFGPVL+ + D +EA+++ N + + ++++ A + I
Sbjct: 356 DNDMRIAQEEIFGPVLVVIPYDDDDEAVRIANDSDYGLSGGVWSADVDRAYRVARRIRTG 415
Query: 630 LVGINVPVPSS----FSSINESGEFNFCGKSGVQFYTQIKTVA 668
VGIN F +SG G G++ + + K++A
Sbjct: 416 SVGINGGGGYGPDAPFGGYKQSGLGRENGIEGLEEFLETKSIA 458
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. Length = 459 |
| >gnl|CDD|143418 cd07100, ALDH_SSADH1_GabD1, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like | Back alignment and domain information |
|---|
Score = 236 bits (604), Expect = 1e-68
Identities = 143/444 (32%), Positives = 210/444 (47%), Gaps = 38/444 (8%)
Query: 243 DAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLF 302
A+D A AF AW+ T A R ++ KL +L+R D+LA IT+E G + A+ +V
Sbjct: 3 AALDRAHAAFLAWRKTSFAERAALLRKLADLLRERKDELARLITLEMGKPIAEARAEV-- 60
Query: 303 GLEVVEQAC------AVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLW 356
E C A A L E + Y EPLGV GI P+NFP W
Sbjct: 61 --EKCAWICRYYAENAEAFLA-DEPIETD--AGKAYVRYEPLGVVLGIMPWNFP----FW 111
Query: 357 -MFSIAV---TCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGTNDVINHICD 412
+F A GNT +LK + PG ++ + L EAG P+GV + +D + I
Sbjct: 112 QVFRFAAPNLMAGNTVLLKHASNVPGCALAIEELFREAGFPEGVFQNLLIDSDQVEAIIA 171
Query: 413 DEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGF 472
D ++ ++ S A + A A K+ GG + I++ DA +D + V
Sbjct: 172 DPRVRGVTLTGSERAGRAVAAEAGKNLKKSVLELGGSDPFIVLDDADLDKAVKTAVKGRL 231
Query: 473 GAAGERCTALSTAVFVGSSV--QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQIS 530
AG+ C A + V V ++ ++ VE ALKV D D+GP+ +++D++
Sbjct: 232 QNAGQSCIA-AKRFIVHEDVYDEFLEKFVEAMAALKVGDPMDEDTDLGPLARKDLRDELH 290
Query: 531 RLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQA 590
++ AV GA+LLL G+ G G F PT+L DVT M Y EE+FGPV ++
Sbjct: 291 EQVEEAVAAGATLLLGGK--RPDG--PGAFYPPTVLTDVTPGMPAYDEELFGPVAAVIKV 346
Query: 591 DSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPVPSS----FSSINE 646
EEAI + N + F G S+FT+ A + +EA +V IN V S F +
Sbjct: 347 KDEEEAIALANDSPFGLGGSVFTTDLERAERVARRLEAGMVFINGMVKSDPRLPFGGVKR 406
Query: 647 SG---EFNFCGKSGVQFYTQIKTV 667
SG E G+ G++ + IKTV
Sbjct: 407 SGYGRE---LGRFGIREFVNIKTV 427
|
Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. Length = 429 |
| >gnl|CDD|143465 cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase family 21A1-like | Back alignment and domain information |
|---|
Score = 236 bits (604), Expect = 2e-68
Identities = 143/475 (30%), Positives = 224/475 (47%), Gaps = 55/475 (11%)
Query: 219 IDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDI 278
++V NP T EV ++V L ++ ++A+ AA +AF + P R I+ +
Sbjct: 1 LEVTNPYTGEVVARVALAGPDDIEEAIAAAVKAFRPMRALPAHRRAAILLHCVARLEERF 60
Query: 279 DKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVPNALCGLDTY------ 332
++LA I +E G +K A+ +V ++ A AT GE +P LD
Sbjct: 61 EELAETIVLEAGKPIKDARGEVARAIDTFRIAAEEATRIYGEVLP-----LDISARGEGR 115
Query: 333 -CF--REPLGVCAGICPFNFP------DMTPLWMFSIAVTCGNTFILKPSEKNPGTSMIL 383
R P+G + I PFNFP + P +IA G F+LKP+ + P +++IL
Sbjct: 116 QGLVRRFPIGPVSAITPFNFPLNLVAHKVAP----AIAA--GCPFVLKPASRTPLSALIL 169
Query: 384 AALAMEAGLPDGVLNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQ 443
+ E GLP G +++ + D + + DE IK +SF S + ARA K+V
Sbjct: 170 GEVLAETGLPKGAFSVLPCSRDDADLLVTDERIKLLSFTGSPAVGWDLKARAGK--KKVV 227
Query: 444 SNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV--QWEDELVEL 501
GG I+ DA +D ++ F AG+ C ++ V V SV +++ LV
Sbjct: 228 LELGGNAAVIVDSDADLDFAAQRIIFGAFYQAGQSCISVQR-VLVHRSVYDEFKSRLVAR 286
Query: 502 AKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFV 561
KALK D + DVGP++S +++ + AVD GA LL G +G +
Sbjct: 287 VKALKTGDPKDDATDVGPMISESEAERVEGWVNEAVDAGAKLL-------TGGKRDGALL 339
Query: 562 GPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSS-GLAAR 620
PTIL DV +ME EE+FGPV+ D +EA+ VN ++F A +FT A R
Sbjct: 340 EPTILEDVPPDMEVNCEEVFGPVVTVEPYDDFDEALAAVNDSKFGLQAGVFTRDLEKALR 399
Query: 621 KFQNEIEARLVGINVPVPS------SFSSINESGEFNFCGKSGVQF----YTQIK 665
+ +E+E V IN VP+ + + +SG G+ GV++ T+ +
Sbjct: 400 AW-DELEVGGVVIN-DVPTFRVDHMPYGGVKDSG----IGREGVRYAIEEMTEPR 448
|
Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. Length = 452 |
| >gnl|CDD|143430 cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like | Back alignment and domain information |
|---|
Score = 235 bits (602), Expect = 4e-68
Identities = 153/483 (31%), Positives = 234/483 (48%), Gaps = 56/483 (11%)
Query: 217 ATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPA--WKNTPVATRQRIMFKLQELI 274
T INPAT V ++V + AV AA+RAF + W A R+ ++ +L +LI
Sbjct: 2 ETFATINPATGRVLAEVAACDAADVDRAVAAARRAFESGVWSRLSPAERKAVLLRLADLI 61
Query: 275 RRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQ---------IGEFVP-- 323
D+LA+ T++ G + A +V A T + GE P
Sbjct: 62 EAHRDELALLETLDMGKPISDALAV-----DVPS---AANTFRWYAEAIDKVYGEVAPTG 113
Query: 324 -NALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMI 382
+AL L T REPLGV + P+NFP + W + A+ GN+ +LKP+E++P T++
Sbjct: 114 PDAL-ALIT---REPLGVVGAVVPWNFPLLMAAWKIAPALAAGNSVVLKPAEQSPLTALR 169
Query: 383 LAALAMEAGLPDGVLNIVHGTNDVIN-----HICDDEDIKAISFVASSTASVQMYARAAA 437
LA LA+EAGLP GVLN+V G H+ D+ A++F ST + + +
Sbjct: 170 LAELALEAGLPAGVLNVVPGFGHTAGEALGLHM----DVDALAFTG-STEVGRRFLEYSG 224
Query: 438 R--GKRVQSNRGGKNYAIIMPDAS-IDATLNALVSAGFGAAGERCTALSTAVFVGSSVQW 494
+ KRV GGK+ I+ DA +DA A + F GE C+A S + V S++
Sbjct: 225 QSNLKRVWLECGGKSPNIVFADAPDLDAAAEAAAAGIFWNQGEVCSAGSR-LLVHESIKD 283
Query: 495 E--DELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVV 552
E +++V A+ K D + +G +VS D++ I++ GA L+ G+ ++
Sbjct: 284 EFLEKVVAAAREWKPGDPLDPATRMGALVSEAHFDKVLGYIESGKAEGARLVAGGKRVLT 343
Query: 553 PGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIF 612
G FV PT+ VT +M +EEIFGPVL + DS EEA+ + N + + AS++
Sbjct: 344 ET--GGFFVEPTVFDGVTPDMRIAREEIFGPVLSVITFDSEEEAVALANDSVYGLAASVW 401
Query: 613 TSSGLAARKFQNEIEARLVGIN------VPVPSSFSSINESGEFNFCGKS--GVQFYTQI 664
TS A + + A V +N + P F +SG N KS + YT++
Sbjct: 402 TSDLSRAHRVARRLRAGTVWVNCFDEGDITTP--FGGFKQSG--NGRDKSLHALDKYTEL 457
Query: 665 KTV 667
KT
Sbjct: 458 KTT 460
|
NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. Length = 462 |
| >gnl|CDD|143420 cd07102, ALDH_EDX86601, Uncharacterized aldehyde dehydrogenase of Synechococcus sp | Back alignment and domain information |
|---|
Score = 234 bits (600), Expect = 6e-68
Identities = 125/419 (29%), Positives = 205/419 (48%), Gaps = 12/419 (2%)
Query: 222 INPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKL 281
I+P V ++ PL + E + A++ A+ A W+ P+ R+ I+ + EL+ + D++
Sbjct: 1 ISPIDGSVIAERPLASLEAVRAALERARAAQKGWRAVPLEERKAIVTRAVELLAANTDEI 60
Query: 282 AMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVC 341
A +T + G + A ++ LE ++A + + G + Y REPLGV
Sbjct: 61 AEELTWQMGRPIAQAGGEIRGMLERARYMISIAEEALADIRVPEKDGFERYIRREPLGVV 120
Query: 342 AGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVH 401
I P+N+P +T + A+ GN ILK S + P AA EAGLP+GV ++H
Sbjct: 121 LIIAPWNYPYLTAVNAVIPALLAGNAVILKHSPQTPLCGERFAAAFAEAGLPEGVFQVLH 180
Query: 402 GTNDVINHICDDEDIKAISFVASSTASV---QMYARAAARG-KRVQSNRGGKNYAIIMPD 457
+++ + D I +SF T SV + RAAA +V GGK+ A + PD
Sbjct: 181 LSHETSAALIADPRIDHVSF----TGSVAGGRAIQRAAAGRFIKVGLELGGKDPAYVRPD 236
Query: 458 ASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV--QWEDELVELAKALKVNVGTDASA 515
A +DA +LV F +G+ C ++ ++V S+ + + V + K K+ D S
Sbjct: 237 ADLDAAAESLVDGAFFNSGQSCCSIER-IYVHESIYDAFVEAFVAVVKGYKLGDPLDPST 295
Query: 516 DVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMEC 575
+GPVVS D + I +A+ GA L+DG G ++ PT+L +V +M
Sbjct: 296 TLGPVVSARAADFVRAQIADAIAKGARALIDGALFPEDK-AGGAYLAPTVLTNVDHSMRV 354
Query: 576 YKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGIN 634
+EE FGPV+ M+ S EAI ++N + + AS++T A ++E V +N
Sbjct: 355 MREETFGPVVGIMKVKSDAEAIALMNDSEYGLTASVWTKDIARAEALGEQLETGTVFMN 413
|
PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. Length = 452 |
| >gnl|CDD|143417 cd07099, ALDH_DDALDH, Methylomonas sp | Back alignment and domain information |
|---|
Score = 233 bits (597), Expect = 1e-67
Identities = 140/464 (30%), Positives = 210/464 (45%), Gaps = 29/464 (6%)
Query: 222 INPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKL 281
NPAT EV +VP+T E AV A+ A AW V R + + + + + D+L
Sbjct: 1 RNPATGEVLGEVPVTDPAEVAAAVARARAAQRAWAALGVEGRAQRLLRWKRALADHADEL 60
Query: 282 AMNITVEQGTTLKAAQRDVLFGLEVVEQACAVA-------TLQIGEFVPNALCGLDTYCF 334
A + E G A +VL LE ++ A A + G +PN ++
Sbjct: 61 AELLHAETGKPRADAGLEVLLALEAIDWAARNAPRVLAPRKVPTGLLMPNKKATVE---- 116
Query: 335 REPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPD 394
P GV I P+N+P +TP+ A+ GN +LKPSE P +LA AG P
Sbjct: 117 YRPYGVVGVISPWNYPLLTPMGDIIPALAAGNAVVLKPSEVTPLVGELLAEAWAAAGPPQ 176
Query: 395 GVLNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAII 454
GVL +V G + D + ++F S ++ A AA R V GGK+ I+
Sbjct: 177 GVLQVVTGDGATGAALID-AGVDKVAFTGSVATGRKVMAAAAERLIPVVLELGGKDPMIV 235
Query: 455 MPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV--QWEDELVELAKALKVNVGTD 512
+ DA ++ A V AG+ C ++ V+V SV ++ LV A+AL+
Sbjct: 236 LADADLERAAAAAVWGAMVNAGQTCISVER-VYVHESVYDEFVARLVAKARALRPGADDI 294
Query: 513 ASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSN 572
AD+GP+ + D + R + +AV GA L G G F PT+L DV +
Sbjct: 295 GDADIGPMTTARQLDIVRRHVDDAVAKGAKALTGGARSNGGG----PFYEPTVLTDVPHD 350
Query: 573 MECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVG 632
M+ +EE FGPVL M +EAI + N +R+ AS+F+ A +EA V
Sbjct: 351 MDVMREETFGPVLPVMPVADEDEAIALANDSRYGLSASVFSRDLARAEAIARRLEAGAVS 410
Query: 633 IN-------VP-VPSSFSSINESGEFNFCGKSGVQFYTQIKTVA 668
IN +P +P F + +SG G G++ + + K +A
Sbjct: 411 INDVLLTAGIPALP--FGGVKDSGGGRRHGAEGLREFCRPKAIA 452
|
4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. Length = 453 |
| >gnl|CDD|143428 cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like | Back alignment and domain information |
|---|
Score = 232 bits (594), Expect = 4e-67
Identities = 136/427 (31%), Positives = 200/427 (46%), Gaps = 15/427 (3%)
Query: 221 VINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDK 280
VINPAT+ ++P T E+ AV AA+RAFP WK T A R + + + E +R ++
Sbjct: 1 VINPATEATIGEIPAATAEDVDAAVRAARRAFPRWKKTTGAERAKYLRAIAEGVRERREE 60
Query: 281 LAMNITVEQGTTLKAAQRDV-----LFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFR 335
LA + G L A DV F + A + VP R
Sbjct: 61 LAELEARDNGKPLDEAAWDVDDVAGCFEY-YADLAEQLDAKA-ERAVPLPSEDFKARVRR 118
Query: 336 EPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDG 395
EP+GV I P+NFP + W + A+ G T +LKPSE T + LA +A EAGLP G
Sbjct: 119 EPVGVVGLITPWNFPLLMAAWKVAPALAAGCTVVLKPSELTSLTELELAEIAAEAGLPPG 178
Query: 396 VLNIVHGTNDVINH-ICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAII 454
VLN+V GT D + I ISF S+ Q+ AA K V GGK+ I+
Sbjct: 179 VLNVVTGTGDEAGAPLAAHPGIDKISFTGSTATGSQVMQAAAQDIKPVSLELGGKSPIIV 238
Query: 455 MPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWE--DELVELAKALKVNVGTD 512
DA ++ + + F G+ C+A S + V S+ + L A+A++V +
Sbjct: 239 FDDADLEKAVEWAMFGCFWNNGQICSATSR-LLVHESIADAFLERLATAAEAIRVGDPLE 297
Query: 513 ASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVP-GYENGNFVGPTILRDVTS 571
+GP+VS +++ I + GA LL GR P E G F+ PT+ DV +
Sbjct: 298 EGVRLGPLVSQAQYEKVLSFIARGKEEGARLLCGGR---RPAHLEKGYFIAPTVFADVPT 354
Query: 572 NMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLV 631
+ ++EEIFGPVL + +EAI + N + + A++ + + +EA +V
Sbjct: 355 DSRIWREEIFGPVLCVRSFATEDEAIALANDSEYGLAAAVISRDAERCDRVAEALEAGIV 414
Query: 632 GINVPVP 638
IN P
Sbjct: 415 WINCSQP 421
|
Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. Length = 456 |
| >gnl|CDD|143459 cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like | Back alignment and domain information |
|---|
Score = 231 bits (591), Expect = 2e-66
Identities = 156/481 (32%), Positives = 229/481 (47%), Gaps = 30/481 (6%)
Query: 205 FIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAF---PAWKNTPVA 261
FI ++ D T INPAT E +V + AV AA+ AF W+ +
Sbjct: 10 FINNEWHDSVSGKTFPTINPATGEKICEVQEGDKADVDKAVKAARAAFKLGSPWRTMDAS 69
Query: 262 TRQRIMFKLQELIRRDIDKLAMNITVEQGTT-LKAAQRDVLFGLEVVEQACAVATLQIGE 320
R R++ KL +LI RD LA T++ G K+ D+ ++V+ A G+
Sbjct: 70 ERGRLLNKLADLIERDRAYLASLETLDNGKPFSKSYLVDLPGAIKVLRYYAGWADKIHGK 129
Query: 321 FVP---NALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNP 377
+P + Y EP+GVC I P+NFP + W + A+ CGNT +LKP+E+ P
Sbjct: 130 TIPMDGDFFT----YTRHEPVGVCGQIIPWNFPLLMAAWKLAPALACGNTVVLKPAEQTP 185
Query: 378 GTSMILAALAMEAGLPDGVLNIVHGTNDVIN-HICDDEDIKAISFVASSTASVQMYARAA 436
T++ LA+L EAG P GV+N+V G I DI ++F ST ++ +AA
Sbjct: 186 LTALYLASLIKEAGFPPGVVNVVPGYGPTAGAAISSHPDIDKVAFTG-STEVGKLIQQAA 244
Query: 437 ARG--KRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQW 494
+ KRV GGK+ I+ DA +D + A F G+ C A + FV S+
Sbjct: 245 GKSNLKRVTLELGGKSPNIVFADADLDYAVEQAHEALFFNMGQCCCA-GSRTFVQESIY- 302
Query: 495 EDELVE--LAKALKVNVGT--DASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNI 550
DE V+ + +A K VG D + GP + E +I LI++ GA L G+
Sbjct: 303 -DEFVKRSVERAKKRVVGNPFDPKTEQGPQIDEEQFKKILELIESGKKEGAKLECGGKRH 361
Query: 551 VVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGAS 610
GY F+ PT+ DVT +M KEEIFGPV + +++E I+ N + A+
Sbjct: 362 GDKGY----FIQPTVFSDVTDDMRIAKEEIFGPVQQIFKFKTIDEVIERANNTTYGLAAA 417
Query: 611 IFTSSGLAARKFQNEIEARLVGIN----VPVPSSFSSINESGEFNFCGKSGVQFYTQIKT 666
+FT A F N + A V +N V + F SG G+ G+Q YT++KT
Sbjct: 418 VFTKDIDKAITFSNALRAGTVWVNCYNVVSPQAPFGGYKMSGNGRELGEYGLQEYTEVKT 477
Query: 667 V 667
V
Sbjct: 478 V 478
|
NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. Length = 481 |
| >gnl|CDD|237391 PRK13473, PRK13473, gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 230 bits (590), Expect = 2e-66
Identities = 128/447 (28%), Positives = 207/447 (46%), Gaps = 32/447 (7%)
Query: 203 SNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVAT 262
I G+ V G V NPAT EV +++ + + AV AA AFP W T
Sbjct: 4 KLLINGELVAGEG-EKQPVYNPATGEVLAEIAEASAAQVDAAVAAADAAFPEWSQTTPKE 62
Query: 263 RQRIMFKLQELIRRDIDKLAMNITVEQ---GTTLKAAQRDVLFGLEVVEQ----ACAVAT 315
R + KL + I + D+ A +E G L A D + +V+ A A
Sbjct: 63 RAEALLKLADAIEENADEFA---RLESLNCGKPLHLALNDEIPA--IVDVFRFFAGAARC 117
Query: 316 LQ---IGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKP 372
L+ GE++ G + R+P+GV A I P+N+P M W + A+ GNT +LKP
Sbjct: 118 LEGKAAGEYLE----GHTSMIRRDPVGVVASIAPWNYPLMMAAWKLAPALAAGNTVVLKP 173
Query: 373 SEKNPGTSMILAALAMEAGLPDGVLNIVHGT-NDVINHICDDEDIKAISFVASSTASVQM 431
SE P T++ LA LA + LP GVLN+V G V + + ++ +S S +
Sbjct: 174 SEITPLTALKLAELAADI-LPPGVLNVVTGRGATVGDALVGHPKVRMVSLTGSIATGKHV 232
Query: 432 YARAAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSS 491
+ AA KR GGK I+ DA +DA + + + G+ AG+ CTA + ++
Sbjct: 233 LSAAADSVKRTHLELGGKAPVIVFDDADLDAVVEGIRTFGYYNAGQDCTA-ACRIYAQRG 291
Query: 492 VQWEDELVE-LAKA---LKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDG 547
+ D+LV LA A LKV D ++GP++S +D+++ ++ A G ++ G
Sbjct: 292 IY--DDLVAKLAAAVATLKVGDPDDEDTELGPLISAAHRDRVAGFVERAKALGHIRVVTG 349
Query: 548 RNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVN 607
G G + PT+L + E + E+FGPV+ D ++A++ N + +
Sbjct: 350 GEA-PDG--KGYYYEPTLLAGARQDDEIVQREVFGPVVSVTPFDDEDQAVRWANDSDYGL 406
Query: 608 GASIFTSSGLAARKFQNEIEARLVGIN 634
+S++T A + ++ +N
Sbjct: 407 ASSVWTRDVGRAHRVSARLQYGCTWVN 433
|
Length = 475 |
| >gnl|CDD|143461 cd07143, ALDH_AldA_AN0554, Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like | Back alignment and domain information |
|---|
Score = 229 bits (586), Expect = 8e-66
Identities = 150/477 (31%), Positives = 231/477 (48%), Gaps = 23/477 (4%)
Query: 205 FIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAF--PAWKNTPVAT 262
FI G+FVD T+ V NP+T ++ +++ T + AV+ A AF +
Sbjct: 10 FINGEFVDSVHGGTVKVYNPSTGKLITKIAEATEADVDIAVEVAHAAFETDWGLKVSGSK 69
Query: 263 RQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQR-DVLFGLEVVEQACAVATLQIGEF 321
R R + KL +L+ R++D LA ++ G T A+R DV + A G+
Sbjct: 70 RGRCLSKLADLMERNLDYLASIEALDNGKTFGTAKRVDVQASADTFRYYGGWADKIHGQV 129
Query: 322 VPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSM 381
+ + L TY EP+GVC I P+NFP + W + A+ GNT +LKPSE P +++
Sbjct: 130 IETDIKKL-TYTRHEPIGVCGQIIPWNFPLLMCAWKIAPALAAGNTIVLKPSELTPLSAL 188
Query: 382 ILAALAMEAGLPDGVLNIVHGTNDVI-NHICDDEDIKAISFVASSTASVQMYARAAARG- 439
+ L EAG P GV+N+V G N I DI ++F ST + AAA+
Sbjct: 189 YMTKLIPEAGFPPGVINVVSGYGRTCGNAISSHMDIDKVAFTG-STLVGRKVMEAAAKSN 247
Query: 440 -KRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV--QWED 496
K+V GGK+ I+ DA +++ + F G+ C A + ++V + ++
Sbjct: 248 LKKVTLELGGKSPNIVFDDADLESAVVWTAYGIFFNHGQVCCA-GSRIYVQEGIYDKFVK 306
Query: 497 ELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYE 556
E AK LKV GP VS ++I I++ GA++ G+ GY
Sbjct: 307 RFKEKAKKLKVGDPFAEDTFQGPQVSQIQYERIMSYIESGKAEGATVETGGKRHGNEGY- 365
Query: 557 NGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSG 616
F+ PTI DVT +M+ KEEIFGPV+ ++ + EEAIK N + + A++FT++
Sbjct: 366 ---FIEPTIFTDVTEDMKIVKEEIFGPVVAVIKFKTEEEAIKRANDSTYGLAAAVFTNNI 422
Query: 617 LAARKFQNEIEARLVGINV------PVPSSFSSINESGEFNFCGKSGVQFYTQIKTV 667
A + N ++A V +N VP F +SG G+ ++ YTQIK V
Sbjct: 423 NNAIRVANALKAGTVWVNCYNLLHHQVP--FGGYKQSGIGRELGEYALENYTQIKAV 477
|
NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. Length = 481 |
| >gnl|CDD|143395 cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehydrogenase superfamily | Back alignment and domain information |
|---|
Score = 224 bits (574), Expect = 2e-65
Identities = 104/303 (34%), Positives = 145/303 (47%), Gaps = 8/303 (2%)
Query: 246 DAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLE 305
AA+ AF AW P A R I+ K+ +L+ ++LA T+E G ++ A +V ++
Sbjct: 1 AAARAAFKAWAALPPAERAAILRKIADLLEERREELAALETLETGKPIEEALGEVARAID 60
Query: 306 VVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCG 365
A +A G +P+ G + Y REPLGV I P+NFP + W + A+ G
Sbjct: 61 TFRYAAGLADKLGGPELPSPDPGGEAYVRREPLGVVGVITPWNFPLLLAAWKLAPALAAG 120
Query: 366 NTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGTNDVI-NHICDDEDIKAISFVAS 424
NT +LKPSE P T++ LA L EAGLP GV+N+V G D + + + ISF S
Sbjct: 121 NTVVLKPSELTPLTALALAELLQEAGLPPGVVNVVPGGGDEVGAALLSHPRVDKISFTGS 180
Query: 425 STASVQMYARAAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALST 484
+ + AA K V GGK+ I+ DA +DA + V F AG+ CTA S
Sbjct: 181 TAVGKAIMKAAAENLKPVTLELGGKSPVIVDEDADLDAAVEGAVFGAFFNAGQICTAASR 240
Query: 485 AVFVGSSVQWEDELVELAKALKVNVGTDAS-ADV---GPVVSVEVKDQISRLIQNAVDNG 540
+ V S+ DE VE + V+V D A GPV+ V I A D
Sbjct: 241 -LLVHESIY--DEFVEKLVTVLVDVDPDMPIAQEEIFGPVLPVIRFKDEEEAIALANDTE 297
Query: 541 ASL 543
L
Sbjct: 298 YGL 300
|
The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-L) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. The ALDH-like group is represented by such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 367 |
| >gnl|CDD|143469 cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 226 bits (578), Expect = 8e-65
Identities = 142/436 (32%), Positives = 218/436 (50%), Gaps = 22/436 (5%)
Query: 208 GKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIM 267
G++ D TIDV+NP T E +++P + E+ +A AA A W T R I+
Sbjct: 1 GEWRDGTSERTIDVLNPYTGETLAEIPAASKEDVDEAYRAAAAAQKEWAATLPQERAEIL 60
Query: 268 FKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVPNALC 327
K +++ D++ + E G+T A + + + +A G +P+ +
Sbjct: 61 EKAAQILEERRDEIVEWLIRESGSTRIKANIEWGAAMAITREAATFPLRMEGRILPSDVP 120
Query: 328 GLDTYCFREPLGVCAGICPFNFPDMTPLWMFSI--AVTCGNTFILKPSEKNPGTS-MILA 384
G + +REPLGV I P+NFP L M S+ A+ GN +LKP+ P T ++LA
Sbjct: 121 GKENRVYREPLGVVGVISPWNFP--LHLSMRSVAPALALGNAVVLKPASDTPITGGLLLA 178
Query: 385 ALAMEAGLPDGVLNIVHGT-NDVINHICDDEDIKAISFVASSTASVQMYARAAARG-KRV 442
+ EAGLP GVLN+V G +++ + + + ISF ST + A R K+V
Sbjct: 179 KIFEEAGLPKGVLNVVVGAGSEIGDAFVEHPVPRLISFTG-STPVGRHIGELAGRHLKKV 237
Query: 443 QSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWEDELVEL- 501
GG N +++ DA IDA +NA V F G+ C A++ + V V DE VE
Sbjct: 238 ALELGGNNPFVVLEDADIDAAVNAAVFGKFLHQGQICMAINR-IIVHEDVY--DEFVEKF 294
Query: 502 ---AKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENG 558
KAL +D VGP+++ D + I+ AV+ GA+LL+ G G
Sbjct: 295 VERVKALPYGDPSDPDTVVGPLINESQVDGLLDKIEQAVEEGATLLVGGE-------AEG 347
Query: 559 NFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLA 618
N + PT+L DVT++ME +EEIFGPV ++AD EEA+++ N + ++FTS
Sbjct: 348 NVLEPTVLSDVTNDMEIAREEIFGPVAPIIKADDEEEALELANDTEYGLSGAVFTSDLER 407
Query: 619 ARKFQNEIEARLVGIN 634
+F I+A + IN
Sbjct: 408 GVQFARRIDAGMTHIN 423
|
NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. Length = 465 |
| >gnl|CDD|143460 cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like | Back alignment and domain information |
|---|
Score = 225 bits (574), Expect = 3e-64
Identities = 150/478 (31%), Positives = 222/478 (46%), Gaps = 25/478 (5%)
Query: 205 FIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFP--AWKNTPVAT 262
FI G+FVD T I+P EV + V E+ AV AA++AF W
Sbjct: 7 FINGQFVDAASGKTFPTIDPRNGEVIAHVAEGDAEDVDRAVKAARKAFDEGPWPRMTGYE 66
Query: 263 RQRIMFKLQELIRRDIDKLAMNITVEQGTTLK-AAQRDVLFGLEVVEQACAVATLQIGEF 321
R RI+ + +L+ + D+LA T + G + A +V + A G
Sbjct: 67 RSRILLRFADLLEKHADELAALETWDNGKPYEQARYAEVPLAARLFRYYAGWADKIHGMT 126
Query: 322 VPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSM 381
+P A Y EP+GV I P+NFP + W A+ CGNT +LKP+E+ P +++
Sbjct: 127 LP-ADGPHHVYTLHEPIGVVGQIIPWNFPLLMFAWKVGPALACGNTIVLKPAEQTPLSAL 185
Query: 382 ILAALAMEAGLPDGVLNIVHGTNDVIN-HICDDEDIKAISFVASS-TASVQMYARAAARG 439
+ A LA EAGLPDGVLNIV G I D+ ++F S+ + M A +
Sbjct: 186 LAAKLAAEAGLPDGVLNIVTGFGPTAGAAIASHMDVDKVAFTGSTEVGKIIMQLAAKSNL 245
Query: 440 KRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWEDELV 499
K V GGK+ I+ DA +D + A F G+ C A + FV S+ DE V
Sbjct: 246 KPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCA-GSRTFVHESIY--DEFV 302
Query: 500 ELAK--ALKVNVGT--DASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGY 555
E AK ALK VG + GP V E ++I I++ + GA+L+ G I GY
Sbjct: 303 EKAKARALKRVVGDPFRKGVEQGPQVDKEQFEKILSYIEHGKEEGATLITGGDRIGSKGY 362
Query: 556 ENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSS 615
++ PTI DV +M+ ++EIFGPV ++ +++E IK N +++ A +F+ +
Sbjct: 363 ----YIQPTIFSDVKDDMKIARDEIFGPVQSILKFKTVDEVIKRANNSKYGLAAGVFSKN 418
Query: 616 GLAARKFQNEIEARLVGIN------VPVPSSFSSINESGEFNFCGKSGVQFYTQIKTV 667
A ++A V +N +P F SG G + Y Q+K V
Sbjct: 419 IDTANTLSRALKAGTVWVNCYDVFDASIP--FGGYKMSGIGREKGIYALNNYLQVKAV 474
|
Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Length = 476 |
| >gnl|CDD|143425 cd07107, ALDH_PhdK-like, Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like | Back alignment and domain information |
|---|
Score = 224 bits (572), Expect = 4e-64
Identities = 143/424 (33%), Positives = 209/424 (49%), Gaps = 19/424 (4%)
Query: 221 VINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDK 280
VINPAT +V ++VP + + AV AA+ AFP W+ T R R++ +L +R ++
Sbjct: 1 VINPATGQVLARVPAASAADVDRAVAAARAAFPEWRATTPLERARMLRELATRLREHAEE 60
Query: 281 LAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGV 340
LA+ ++ G + A DV+ +++ + T GE +P L Y REP GV
Sbjct: 61 LALIDALDCGNPVSAMLGDVMVAAALLDYFAGLVTELKGETIPVGGRNLH-YTLREPYGV 119
Query: 341 CAGICPFNFPDMTPLWMFSIAVT-----CGNTFILKPSEKNPGTSMILAALAMEAGLPDG 395
A I FN P MF+ A GNT ++KP E+ P +++ LA LA E LP G
Sbjct: 120 VARIVAFNHP-----LMFAAAKIAAPLAAGNTVVVKPPEQAPLSALRLAELAREV-LPPG 173
Query: 396 VLNIVHGTNDVINH-ICDDEDIKAISFVASSTASVQMYARAAARG-KRVQSNRGGKNYAI 453
V NI+ G + D+K I+ + S + + RAAA G K V GGKN I
Sbjct: 174 VFNILPGDGATAGAALVRHPDVKRIALIGS-VPTGRAIMRAAAEGIKHVTLELGGKNALI 232
Query: 454 IMPDASIDATLNALVSA-GFGAAGERCTALSTAVFVGSSVQWE--DELVELAKALKVNVG 510
+ PDA +A +A V+ F G+ C + S FV S+ E +VE A+KV
Sbjct: 233 VFPDADPEAAADAAVAGMNFTWCGQSCGSTSRL-FVHESIYDEVLARVVERVAAIKVGDP 291
Query: 511 TDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVT 570
TD + +GP+VS + D++ I +A GA L+ G P E G +V PT+ DVT
Sbjct: 292 TDPATTMGPLVSRQQYDRVMHYIDSAKREGARLVTGGGRPEGPALEGGFYVEPTVFADVT 351
Query: 571 SNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARL 630
M +EEIFGPVL ++ E + N + A+I+T+ A + +EA
Sbjct: 352 PGMRIAREEIFGPVLSVLRWRDEAEMVAQANGVEYGLTAAIWTNDISQAHRTARRVEAGY 411
Query: 631 VGIN 634
V IN
Sbjct: 412 VWIN 415
|
Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. Length = 456 |
| >gnl|CDD|143426 cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like | Back alignment and domain information |
|---|
Score = 217 bits (556), Expect = 6e-62
Identities = 137/462 (29%), Positives = 221/462 (47%), Gaps = 22/462 (4%)
Query: 221 VINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDK 280
VINPAT +V +VP + + AV AAK AFP W TP R +++ ++ + + ++
Sbjct: 1 VINPATGQVIGEVPRSRAADVDRAVAAAKAAFPEWAATPARERGKLLARIADALEARSEE 60
Query: 281 LAMNITVEQGTTLKAAQR-DVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLG 339
LA + +E G L+ R + ++ +A GE +P + TY REPLG
Sbjct: 61 LARLLALETGNALRTQARPEAAVLADLFRYFGGLAGELKGETLPFG-PDVLTYTVREPLG 119
Query: 340 VCAGICPFNFPDMTPLWMFSI--AVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVL 397
V I P+N P M L I A+ GNT +LK +E P ++LA + + LP GVL
Sbjct: 120 VVGAILPWNAPLM--LAALKIAPALVAGNTVVLKAAEDAPLAVLLLAEILAQV-LPAGVL 176
Query: 398 NIVHGTNDVINH-ICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMP 456
N++ G + + D D+ ++F S+ +Y AA R V GGK+ I+ P
Sbjct: 177 NVITGYGEECGAALVDHPDVDKVTFTGSTEVGKIIYRAAADRLIPVSLELGGKSPMIVFP 236
Query: 457 DASIDATLN-ALVSAGFGAAGERCTALSTAVFVGSSV--QWEDELVELAKALKVNVGTDA 513
DA +D ++ A+ F G+ CTA + +FV + + ++LV LK+ D
Sbjct: 237 DADLDDAVDGAIAGMRFTRQGQSCTA-GSRLFVHEDIYDAFLEKLVAKLSKLKIGDPLDE 295
Query: 514 SADVGPVVSVEVKDQISRLIQNAVD-NGASLLLDGRNIVVPGYENGNFVGPTILRDVTSN 572
+ D+G ++S + ++ I + +GA++L G +G FV PTI V +
Sbjct: 296 ATDIGAIISEKQFAKVCGYIDLGLSTSGATVLRGGPLPGEGPLADGFFVQPTIFSGVDNE 355
Query: 573 MECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVG 632
+EEIFGPVL + +E I M N + + A ++T A + + +EA V
Sbjct: 356 WRLAREEIFGPVLCAIPWKDEDEVIAMANDSHYGLAAYVWTRDLGRALRAAHALEAGWVQ 415
Query: 633 IN---VPVPS-SFSSINESG---EFNFCGKSGVQFYTQIKTV 667
+N P S+ +SG E + + ++ +TQ KTV
Sbjct: 416 VNQGGGQQPGQSYGGFKQSGLGREASL--EGMLEHFTQKKTV 455
|
NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. Length = 457 |
| >gnl|CDD|143458 cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L | Back alignment and domain information |
|---|
Score = 216 bits (551), Expect = 5e-61
Identities = 141/483 (29%), Positives = 226/483 (46%), Gaps = 29/483 (6%)
Query: 205 FIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPA--WKNTPVAT 262
FI G+FVD G T + INP V +V L T E+ AV AAK AF W
Sbjct: 9 FINGEFVDAEGGKTYNTINPTDGSVICKVSLATVEDVDRAVAAAKEAFENGEWGKMNARD 68
Query: 263 RQRIMFKLQELIRRDIDKLAMNITVEQGT--TLKAAQRDVLFGLEVVE------QACAVA 314
R R+M++L +L+ ++LA +++ G TL A + V ++
Sbjct: 69 RGRLMYRLADLMEEHQEELATIESLDSGAVYTL-ALKTHVGMSIQTFRYFAGWCDKIQGK 127
Query: 315 TLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSE 374
T+ I + PN T REP+GVC + P+N+P M W + + GNT +LKP++
Sbjct: 128 TIPINQARPNRNL---TLTKREPIGVCGIVIPWNYPLMMLAWKMAACLAAGNTVVLKPAQ 184
Query: 375 KNPGTSMILAALAMEAGLPDGVLNIVHGTNDVI-NHICDDEDIKAISFVASSTASVQ-MY 432
P T++ A L ++AG P GV+NI+ G+ ++ + D D++ + F S+ M
Sbjct: 185 VTPLTALKFAELTVKAGFPKGVINILPGSGSLVGQRLSDHPDVRKLGFTGSTPIGKHIMK 244
Query: 433 ARAAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV 492
+ A + K+V GGK+ II D +D + +S+ F GE C A + +FV S+
Sbjct: 245 SCAVSNLKKVSLELGGKSPLIIFADCDMDKAVRMGMSSVFFNKGENCIA-AGRLFVEESI 303
Query: 493 QWE--DELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNI 550
E +VE K +K+ D S D GP D++ + V GA+L+ G+ +
Sbjct: 304 HDEFVRRVVEEVKKMKIGDPLDRSTDHGPQNHKAHLDKLVEYCERGVKEGATLVYGGKQV 363
Query: 551 VVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLL--NMQADSLEEAIKMVNRNRFVNG 608
PG+ F PT+ DV +M KEE FGP+++ ++ ++ N +
Sbjct: 364 DRPGF----FFEPTVFTDVEDHMFIAKEESFGPIMIISKFDDGDVDGVLQRANDTEYGLA 419
Query: 609 ASIFTSSGLAARKFQNEIEARLVGINV----PVPSSFSSINESGEFNFCGKSGVQFYTQI 664
+ +FT A +++EA V +N V + F +SG G+ + Y +
Sbjct: 420 SGVFTKDINKALYVSDKLEAGTVFVNTYNKTDVAAPFGGFKQSGFGKDLGEEALNEYLKT 479
Query: 665 KTV 667
KTV
Sbjct: 480 KTV 482
|
10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids. Length = 486 |
| >gnl|CDD|143471 cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like | Back alignment and domain information |
|---|
Score = 215 bits (550), Expect = 6e-61
Identities = 138/479 (28%), Positives = 216/479 (45%), Gaps = 24/479 (5%)
Query: 204 NFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATR 263
NFI G++V D NP +V ++P +T E+ AVDAA AF W T VA R
Sbjct: 3 NFINGEWVAPSKGEYFDNYNPVNGKVLCEIPRSTAEDVDLAVDAAHEAFKTWGKTSVAER 62
Query: 264 QRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQR-DVLFGLEVVEQACAVATLQIGEFV 322
I+ K+ + I +++ LA+ T++ G ++ D+ ++ V Q G
Sbjct: 63 ANILNKIADRIEENLELLAVAETLDNGKPIRETLAADIPLAIDHFRYFAGVIRAQEGS-- 120
Query: 323 PNALCGLD----TYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPG 378
L +D +Y F EPLGV I P+NFP + W + A+ GNT +LKP+ + P
Sbjct: 121 ---LSEIDEDTLSYHFHEPLGVVGQIIPWNFPLLMAAWKLAPALAAGNTVVLKPASQTPL 177
Query: 379 TSMILAALAMEAGLPDGVLNIVHGTNDVI-NHICDDEDIKAISFVASSTASVQMYARAAA 437
+ ++L L + LP GV+N+V G + I ++F S+T + AA
Sbjct: 178 SILVLMELIGDL-LPKGVVNVVTGFGSEAGKPLASHPRIAKLAFTGSTTVGRLIMQYAAE 236
Query: 438 RGKRVQSNRGGKNYAIIMPDA--SIDATLNALVSAGFGAA---GERCTALSTAVFVGSSV 492
V GGK+ I DA + D + G A GE CT S A V S+
Sbjct: 237 NLIPVTLELGGKSPNIFFDDAMDADDDFDDKAEEGQLGFAFNQGEVCTCPSRA-LVQESI 295
Query: 493 --QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNI 550
++ + VE +A+KV D +G VS + ++I + + GA +L G +
Sbjct: 296 YDEFIERAVERFEAIKVGNPLDPETMMGAQVSKDQLEKILSYVDIGKEEGAEVLTGGERL 355
Query: 551 VVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGAS 610
+ G + G F PT+++ ++M ++EEIFGPVL + EEAI + N + G
Sbjct: 356 TLGGLDKGYFYEPTLIKGGNNDMRIFQEEIFGPVLAVITFKDEEEAIAIANDTEYGLGGG 415
Query: 611 IFTSSGLAARKFQNEIEARLVGIN----VPVPSSFSSINESGEFNFCGKSGVQFYTQIK 665
++T A + I+ V +N P + F +SG K + Y Q K
Sbjct: 416 VWTRDINRALRVARGIQTGRVWVNCYHQYPAHAPFGGYKKSGIGRETHKMMLDHYQQTK 474
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. Length = 480 |
| >gnl|CDD|179543 PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 214 bits (547), Expect = 4e-60
Identities = 147/491 (29%), Positives = 229/491 (46%), Gaps = 42/491 (8%)
Query: 206 IGGKFVDLRGSATIDVINPA-TQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQ 264
IGG+ + I INPA EV +V T E + A+ AA AF WK R
Sbjct: 41 IGGERIT--TEDKIVSINPANKSEVVGRVSKATKELAEKAMQAALEAFETWKKWSPEDRA 98
Query: 265 RIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVP- 323
RI+ + +IRR + + + E G A D ++ +E A L++ + P
Sbjct: 99 RILLRAAAIIRRRKHEFSAWLVKEAGKPWAEADADTAEAIDFLEYY-ARQMLKLADGKPV 157
Query: 324 NALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMIL 383
+ G F PLGV I P+NFP M A+ GNT +LKP+ P +
Sbjct: 158 ESRPGEHNRYFYIPLGVGVVISPWNFPFAIMAGMTLAAIVAGNTVLLKPASDTPVIAAKF 217
Query: 384 AALAMEAGLPDGVLNIVHGTNDVI-NHICDDEDIKAISFVASSTASVQMYARAA--ARG- 439
+ EAGLP GV+N V G+ + +++ D + I+F S +++Y RAA G
Sbjct: 218 VEVLEEAGLPAGVVNFVPGSGSEVGDYLVDHPKTRFITFTGSREVGLRIYERAAKVQPGQ 277
Query: 440 ---KRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWE- 495
KRV + GGK+ ++ DA +D ++V++ FG +G++C+A S A+ V V E
Sbjct: 278 IWLKRVIAEMGGKDAIVVDEDADLDLAAESIVASAFGFSGQKCSACSRAI-VHEDVYDEV 336
Query: 496 -DELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPG 554
+++VEL K L V D A +GPV++ D+I I+ + G L+L G G
Sbjct: 337 LEKVVELTKELTVGNPEDN-AYMGPVINQASFDKIMSYIEIGKEEG-RLVLGGEGDDSKG 394
Query: 555 YENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRF-VNGASIFT 613
Y F+ PTI DV +EEIFGPV+ ++A + A+++ N + + GA I
Sbjct: 395 Y----FIQPTIFADVDPKARIMQEEIFGPVVAFIKAKDFDHALEIANNTEYGLTGAVI-- 448
Query: 614 SSGLAARKFQNEIEAR---LVG---INVPVPSSFSSINESGEFNFCG---KSG----VQF 660
+ ++ +AR VG N + + G FN G K+G +
Sbjct: 449 -----SNNREHLEKARREFHVGNLYFNRGCTGAIVGYHPFGGFNMSGTDSKAGGPDYLLL 503
Query: 661 YTQIKTVAQQW 671
+ Q KTV++ +
Sbjct: 504 FLQAKTVSEMF 514
|
Length = 514 |
| >gnl|CDD|143470 cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Score = 205 bits (524), Expect = 1e-57
Identities = 135/460 (29%), Positives = 206/460 (44%), Gaps = 37/460 (8%)
Query: 228 EVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITV 287
V +V + + A A A AW TP R ++ + +L+ D++A I
Sbjct: 2 AVLGEVGVADAADVDRAAARAAAAQRAWAATPPRERAAVLRRAADLLEEHADEIADWIVR 61
Query: 288 EQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPF 347
E G+ A +V + + +A + T GE +P+A G + R PLGV I PF
Sbjct: 62 ESGSIRPKAGFEVGAAIGELHEAAGLPTQPQGEILPSA-PGRLSLARRVPLGVVGVISPF 120
Query: 348 NFPDMTPLWMFSI--AVTCGNTFILKPSEKNPGTS-MILAALAMEAGLPDGVLNIVHGTN 404
NFP + L M S+ A+ GN +LKP + P + +++A L EAGLP GVL+++ G
Sbjct: 121 NFPLI--LAMRSVAPALALGNAVVLKPDPRTPVSGGVVIARLFEEAGLPAGVLHVLPGGA 178
Query: 405 DVINHICDDEDIKAISFVASSTASVQMYARAAARG-KRVQSNRGGKNYAIIMPDASIDAT 463
D + +D ++ ISF S+ ++ AA R K+V GGKN I++ DA +D
Sbjct: 179 DAGEALVEDPNVAMISFTGSTAVGRKV-GEAAGRHLKKVSLELGGKNALIVLDDADLDLA 237
Query: 464 LNALVSAGFGAAGERCTALSTAVFVGSSVQWEDELVEL--AKALKVNVGTDASADV--GP 519
+ F G+ C A + V SV D AKA + VG A+ V GP
Sbjct: 238 ASNGAWGAFLHQGQICMA-AGRHLVHESVA--DAYTAKLAAKAKHLPVGDPATGQVALGP 294
Query: 520 VVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEE 579
+++ D++ ++ ++V GA L G Y+ G F PT+L V M + EE
Sbjct: 295 LINARQLDRVHAIVDDSVAAGARLEAGGT------YD-GLFYRPTVLSGVKPGMPAFDEE 347
Query: 580 IFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGIN----- 634
IFGPV DS EEA+ + N + A I + A + + ++ IN
Sbjct: 348 IFGPVAPVTVFDSDEEAVALANDTEYGLSAGIISRDVGRAMALADRLRTGMLHINDQTVN 407
Query: 635 --VPVPSSFSSINESGE-FNFCGKSGVQFYTQIKTVAQQW 671
P F + SG F G + + +TQ QW
Sbjct: 408 DEPHNP--FGGMGASGNGSRFGGPANWEEFTQ-----WQW 440
|
NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. Length = 443 |
| >gnl|CDD|143464 cd07146, ALDH_PhpJ, Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like | Back alignment and domain information |
|---|
Score = 204 bits (522), Expect = 2e-57
Identities = 137/471 (29%), Positives = 213/471 (45%), Gaps = 44/471 (9%)
Query: 219 IDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVA-TRQRIMFKLQELIRRD 277
++V NP T EV VP T ++A+ A ++++T R I+ K L+
Sbjct: 1 LEVRNPYTGEVVGTVPAGT----EEALREALALAASYRSTLTRYQRSAILNKAAALLEAR 56
Query: 278 IDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQI-GEFVPNALCGLDT----- 331
++ A IT+E G LK + +V +V+ + A L+ GE C L
Sbjct: 57 REEFARLITLESGLCLKDTRYEVGRAADVL-RFAAAEALRDDGESFS---CDLTANGKAR 112
Query: 332 --YCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAME 389
+ REPLGV I PFN P + A+ N +LKPSEK P +++ LA L E
Sbjct: 113 KIFTLREPLGVVLAITPFNHPLNQVAHKIAPAIAANNRIVLKPSEKTPLSAIYLADLLYE 172
Query: 390 AGLPDGVLNIVHGT-NDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGG 448
AGLP +L++V G ++ + + D+ ++F +V A A KR GG
Sbjct: 173 AGLPPDMLSVVTGEPGEIGDELITHPDVDLVTFTGG--VAVGKAIAATAGYKRQLLELGG 230
Query: 449 KNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWE--DELVELAKALK 506
+ I+M DA ++ V+ + +G+RCTA+ + V SV E D LVE + AL
Sbjct: 231 NDPLIVMDDADLERAATLAVAGSYANSGQRCTAVKR-ILVHESVADEFVDLLVEKSAALV 289
Query: 507 VNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTIL 566
V D + D+G V+ E QI ++ A+ GA +LL + G PT+L
Sbjct: 290 VGDPMDPATDMGTVIDEEAAIQIENRVEEAIAQGARVLLGNQ-------RQGALYAPTVL 342
Query: 567 RDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEI 626
V + E EE FGPV ++ L+EAI + N + + + T+ ++ +
Sbjct: 343 DHVPPDAELVTEETFGPVAPVIRVKDLDEAIAISNSTAYGLSSGVCTNDLDTIKRLVERL 402
Query: 627 EARLVGINVPVP------SSFSSINESGEFNFCGKSGVQ----FYTQIKTV 667
+ V +N VP S F + +SG GK GV+ T +KT
Sbjct: 403 DVGTVNVN-EVPGFRSELSPFGGVKDSG---LGGKEGVREAMKEMTNVKTY 449
|
Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. Length = 451 |
| >gnl|CDD|183050 PRK11241, gabD, succinate-semialdehyde dehydrogenase I; Provisional | Back alignment and domain information |
|---|
Score = 203 bits (519), Expect = 1e-56
Identities = 134/474 (28%), Positives = 223/474 (47%), Gaps = 16/474 (3%)
Query: 201 RVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPV 260
R I G+++D IDV NPA + VP +E + A+DAA RA PAW+
Sbjct: 10 RQQALINGEWLDANNGEVIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRALTA 69
Query: 261 ATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGE 320
R I+ + L+ D LA +T+EQG L A+ ++ + +E G+
Sbjct: 70 KERANILRRWFNLMMEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYGD 129
Query: 321 FVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTS 380
+P ++P+GV A I P+NFP A+ G T +LKP+ + P ++
Sbjct: 130 TIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSA 189
Query: 381 MILAALAMEAGLPDGVLNIVHGT-NDVINHICDDEDIKAISFVASSTASVQMYARAAARG 439
+ LA LA+ AG+P GV N+V G+ V + + ++ +SF S+ Q+ + A
Sbjct: 190 LALAELAIRAGIPAGVFNVVTGSAGAVGGELTSNPLVRKLSFTGSTEIGRQLMEQCAKDI 249
Query: 440 KRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV--QWEDE 497
K+V GG I+ DA +D + +++ F AG+ C + ++V V ++ ++
Sbjct: 250 KKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVC-ANRLYVQDGVYDRFAEK 308
Query: 498 LVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYEN 557
L + L + G + +GP++ + ++ I +A++ GA ++ G+
Sbjct: 309 LQQAVSKLHIGDGLEKGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGK----AHELG 364
Query: 558 GNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGL 617
GNF PTIL DV +N + KEE FGP+ + + I N F A+ F + L
Sbjct: 365 GNFFQPTILVDVPANAKVAKEETFGPLAPLFRFKDEADVIAQANDTEF-GLAAYFYARDL 423
Query: 618 AARKFQ--NEIEARLVGINVPVPSS----FSSINESGEFNFCGKSGVQFYTQIK 665
+R F+ +E +VGIN + S+ F I SG K G++ Y +IK
Sbjct: 424 -SRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIK 476
|
Length = 482 |
| >gnl|CDD|143435 cd07117, ALDH_StaphAldA1, Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 202 bits (516), Expect = 2e-56
Identities = 133/475 (28%), Positives = 220/475 (46%), Gaps = 19/475 (4%)
Query: 205 FIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQ 264
FI G++V TID NPA E S++ T + AV AA+ AF W+ T VA R
Sbjct: 4 FINGEWVKGSSGETIDSYNPANGETLSEITDATDADVDRAVKAAQEAFKTWRKTTVAERA 63
Query: 265 RIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQR-DVLFGLEVVEQACAVATLQIGEFVP 323
I+ K+ ++I + + LAM T++ G ++ + D+ + V + G
Sbjct: 64 NILNKIADIIDENKELLAMVETLDNGKPIRETRAVDIPLAADHFRYFAGVIRAEEGSANM 123
Query: 324 NALCGLD----TYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGT 379
+D + REP+GV I P+NFP + W + A+ GNT ++KPS +
Sbjct: 124 -----IDEDTLSIVLREPIGVVGQIIPWNFPFLMAAWKLAPALAAGNTVVIKPSSTTSLS 178
Query: 380 SMILAALAMEAGLPDGVLNIVHGT-NDVINHICDDEDIKAISFVASSTASVQMYARAAAR 438
+ LA + + LP GV+NIV G + ++ + + ++F S+ + AA +
Sbjct: 179 LLELAKIIQDV-LPKGVVNIVTGKGSKSGEYLLNHPGLDKLAFTGSTEVGRDVAIAAAKK 237
Query: 439 GKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV--QWED 496
GGK+ II DA+ D L G+ C A S +FV + ++
Sbjct: 238 LIPATLELGGKSANIIFDDANWDKALEGAQLGILFNQGQVCCAGSR-IFVQEGIYDEFVA 296
Query: 497 ELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYE 556
+L E + +KV D +G V+ + D+I + A + GA +L G + G +
Sbjct: 297 KLKEKFENVKVGNPLDPDTQMGAQVNKDQLDKILSYVDIAKEEGAKILTGGHRLTENGLD 356
Query: 557 NGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSG 616
G F+ PT++ +VT++M +EEIFGPV ++ + +E I M N + + G +FT
Sbjct: 357 KGFFIEPTLIVNVTNDMRVAQEEIFGPVATVIKFKTEDEVIDMANDSEYGLGGGVFTKDI 416
Query: 617 LAARKFQNEIEARLVGIN----VPVPSSFSSINESGEFNFCGKSGVQFYTQIKTV 667
A + +E V +N +P + F +SG KS + YTQ+K +
Sbjct: 417 NRALRVARAVETGRVWVNTYNQIPAGAPFGGYKKSGIGRETHKSMLDAYTQMKNI 471
|
Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. Length = 475 |
| >gnl|CDD|132260 TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 202 bits (515), Expect = 3e-56
Identities = 145/493 (29%), Positives = 222/493 (45%), Gaps = 47/493 (9%)
Query: 204 NFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPA-WKNTPVAT 262
NFI G FV+ T INP V ++V E AV AA+ A W VA
Sbjct: 3 NFINGAFVE--SGKTFANINPVDGRVIARVHEAGAAEVDAAVAAARAALKGPWGKMTVAE 60
Query: 263 RQRIMFKLQELIRRDIDKLAMNITVEQGTTLK----AAQRDVLFGL-------EVVEQA- 310
R +++ + + I R D + E T K A+ D+ G +VV+ A
Sbjct: 61 RADLLYAVADEIERRFDDF---LAAEVADTGKPRSLASHLDIPRGAANFRVFADVVKNAP 117
Query: 311 --CAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTF 368
C G+ N Y R+PLGV I P+N P + W A+ CGNT
Sbjct: 118 TECFEMATPDGKGALN-------YAVRKPLGVVGVISPWNLPLLLMTWKVGPALACGNTV 170
Query: 369 ILKPSEKNPGTSMILAALAMEAGLPDGVLNIVH--GTNDVINHICDDEDIKAISFVASS- 425
++KPSE+ PGT+ +L + G+P GV N+VH G + + + AI+F +
Sbjct: 171 VVKPSEETPGTATLLGEVMNAVGVPKGVYNVVHGFGPDSAGEFLTRHPGVDAITFTGETR 230
Query: 426 TASVQMYARAAARG-KRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALST 484
T S M +AAA G K V GGKN AI+ D DA + ++ + F G+ C +
Sbjct: 231 TGSAIM--KAAADGVKPVSFELGGKNAAIVFADCDFDAAVAGILRSAFLNTGQVCLG-TE 287
Query: 485 AVFVGSSV--QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGAS 542
V+V + ++ L A++LK+ V D + ++GP++S E +D++ AV+ GA+
Sbjct: 288 RVYVERPIFDRFVAALKARAESLKIGVPDDPATNMGPLISAEHRDKVLSYYALAVEEGAT 347
Query: 543 LLLDGRNIVVP----GYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIK 598
++ G VP G +V PTI + + EEIFGP DS EE I
Sbjct: 348 VVTGGG---VPDFGDALAGGAWVQPTIWTGLPDSARVVTEEIFGPCCHIAPFDSEEEVIA 404
Query: 599 MVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINV----PVPSSFSSINESGEFNFCG 654
+ N + AS++T A + ++E +V +N + + F SG G
Sbjct: 405 LANDTPYGLAASVWTEDLSRAHRVARQMEVGIVWVNSWFLRDLRTPFGGSKLSGIGREGG 464
Query: 655 KSGVQFYTQIKTV 667
++FYT++ V
Sbjct: 465 VHSLEFYTELTNV 477
|
Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation [Energy metabolism, Other]. Length = 481 |
| >gnl|CDD|215410 PLN02766, PLN02766, coniferyl-aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 202 bits (516), Expect = 3e-56
Identities = 139/439 (31%), Positives = 211/439 (48%), Gaps = 17/439 (3%)
Query: 205 FIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFP--AWKNTPVAT 262
FI G+FVD T + +P T EV +++ E+ AV AA+ AF W
Sbjct: 24 FINGEFVDAASGKTFETRDPRTGEVIARIAEGDKEDVDLAVKAAREAFDHGPWPRMSGFE 83
Query: 263 RQRIMFKLQELIRRDIDKLAMNITVEQGTTL---KAAQRDVLFGLEVVEQACAVATLQIG 319
R RIM K +LI I++LA T++ G KA D+ ++ A G
Sbjct: 84 RGRIMMKFADLIEEHIEELAALDTIDAGKLFALGKAV--DIPAAAGLLRYYAGAADKIHG 141
Query: 320 EFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGT 379
E + + L Y +EP+GV I P+NFP + A+ G T ++KP+E+ P +
Sbjct: 142 ETLKMSR-QLQGYTLKEPIGVVGHIIPWNFPSTMFFMKVAPALAAGCTMVVKPAEQTPLS 200
Query: 380 SMILAALAMEAGLPDGVLNIVHGTNDVIN-HICDDEDIKAISFVASS-TASVQMYARAAA 437
++ A LA AG+PDGV+N+V G I D+ +SF S+ M A A +
Sbjct: 201 ALFYAHLAKLAGVPDGVINVVTGFGPTAGAAIASHMDVDKVSFTGSTEVGRKIMQAAATS 260
Query: 438 RGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV--QWE 495
K+V GGK+ +I DA +D ++ + F GE C A S+ V+V + ++
Sbjct: 261 NLKQVSLELGGKSPLLIFDDADVDMAVDLALLGIFYNKGEICVA-SSRVYVQEGIYDEFV 319
Query: 496 DELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGY 555
+LVE AK V D A GP V + ++I I++ GA+LL G+ P
Sbjct: 320 KKLVEKAKDWVVGDPFDPRARQGPQVDKQQFEKILSYIEHGKREGATLLTGGK----PCG 375
Query: 556 ENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSS 615
+ G ++ PTI DVT +M+ ++EIFGPV+ M+ ++EEAIK N ++ A I T
Sbjct: 376 DKGYYIEPTIFTDVTEDMKIAQDEIFGPVMSLMKFKTVEEAIKKANNTKYGLAAGIVTKD 435
Query: 616 GLAARKFQNEIEARLVGIN 634
A I A + +N
Sbjct: 436 LDVANTVSRSIRAGTIWVN 454
|
Length = 501 |
| >gnl|CDD|182233 PRK10090, PRK10090, aldehyde dehydrogenase A; Provisional | Back alignment and domain information |
|---|
Score = 196 bits (501), Expect = 4e-55
Identities = 121/425 (28%), Positives = 199/425 (46%), Gaps = 35/425 (8%)
Query: 267 MFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVPNAL 326
+ K+ IR +++ I E G + A+ +V F + ++ A GE + +
Sbjct: 1 LRKIAAGIRERASEISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRYEGEIIQSDR 60
Query: 327 CGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIA------VTCGNTFILKPSEKNPGTS 380
G + F+ LGV GI P+NFP F IA + GNT ++KPSE P +
Sbjct: 61 PGENILLFKRALGVTTGILPWNFP------FFLIARKMAPALLTGNTIVIKPSEFTPNNA 114
Query: 381 MILAALAMEAGLPDGVLNIVHGTNDVI-NHICDDEDIKAISFVASSTASVQMYARAAARG 439
+ A + E GLP GV N+V G + + + + + +S S +A ++ A AA
Sbjct: 115 IAFAKIVDEIGLPKGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMAAAAKNI 174
Query: 440 KRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWEDELV 499
+V GGK AI+M DA +D + A+V + +G+ C + V+V + D+ V
Sbjct: 175 TKVCLELGGKAPAIVMDDADLDLAVKAIVDSRVINSGQVCNC-AERVYVQKGIY--DQFV 231
Query: 500 E-LAKALK-VNVGTDASA---DVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPG 554
L +A++ V G A +GP+++ +++ + + AV+ GA + L G+ + G
Sbjct: 232 NRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEGKG 291
Query: 555 YENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTS 614
Y + PT+L DV M EE FGPVL + D+LEEAI M N + + +SI+T
Sbjct: 292 Y----YYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEEAIAMANDSDYGLTSSIYTQ 347
Query: 615 SGLAARKFQNEIEARLVGINVPVPSSFSSIN-------ESGEFNFCGKSGVQFYTQIKTV 667
+ A K ++ IN +F ++ +SG GK G+ Y Q + V
Sbjct: 348 NLNVAMKAIKGLKFGETYIN---RENFEAMQGFHAGWRKSGIGGADGKHGLHEYLQTQVV 404
Query: 668 AQQWN 672
Q +
Sbjct: 405 YLQSD 409
|
Length = 409 |
| >gnl|CDD|200087 TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative | Back alignment and domain information |
|---|
Score = 197 bits (502), Expect = 3e-54
Identities = 133/484 (27%), Positives = 212/484 (43%), Gaps = 25/484 (5%)
Query: 205 FIGGKFVDLRGSATIDVINPA-TQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATR 263
I G+ V+ I INP EV V + E + A+ AA +AF AWK T R
Sbjct: 36 VINGERVETENK--IVSINPCDKSEVVGTVSKASQEHAEHALQAAAKAFEAWKKTDPEER 93
Query: 264 QRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVP 323
I+FK ++RR + + + E G A +V ++ +E
Sbjct: 94 AAILFKAAAIVRRRRHEFSALLVKEVGKPWNEADAEVAEAIDFMEYYARQMIELAKGKPV 153
Query: 324 NALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMIL 383
N+ G P GV I P+NFP + M + GN +LKP+E P +
Sbjct: 154 NSREGETNQYVYTPTGVTVVISPWNFPFAIMVGMTVAPIVTGNCVVLKPAEAAPVIAAKF 213
Query: 384 AALAMEAGLPDGVLNIVHGTNDVI-NHICDDEDIKAISFVASSTASVQMYARAA------ 436
+ EAGLP GV+ V G+ + +++ D I+F S +++ RAA
Sbjct: 214 VEILEEAGLPKGVVQFVPGSGSEVGDYLVDHPKTSLITFTGSREVGTRIFERAAKVQPGQ 273
Query: 437 ARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV--QW 494
KRV + GGK+ I+ DA I+ + ++ FG AG++C+A S AV V V +
Sbjct: 274 KHLKRVIAEMGGKDTVIVDEDADIELAAQSAFTSAFGFAGQKCSAGSRAV-VHEKVYDEV 332
Query: 495 EDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPG 554
+ VE+ ++LKV A VGPV+ + ++I I+ G L+ G G
Sbjct: 333 VERFVEITESLKVGPPDSADVYVGPVIDQKSFNKIMEYIEIGKAEG-RLVSGGCGDDSKG 391
Query: 555 YENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTS 614
Y F+GPTI DV +EEIFGPV+ ++A +EA+++ N + + ++
Sbjct: 392 Y----FIGPTIFADVDRKARLAQEEIFGPVVAFIRASDFDEALEIANNTEYGLTGGVISN 447
Query: 615 SGLAARKFQNEIEARLVGINVPVPSSFSSINESGEFNFCG---KSG----VQFYTQIKTV 667
+ + + E E + N + + G F G K+G + + Q KTV
Sbjct: 448 NRDHINRAKAEFEVGNLYFNRNITGAIVGYQPFGGFKMSGTDSKAGGPDYLALFMQAKTV 507
Query: 668 AQQW 671
+ +
Sbjct: 508 TEMF 511
|
This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs [Energy metabolism, Amino acids and amines]. Length = 511 |
| >gnl|CDD|143414 cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like | Back alignment and domain information |
|---|
Score = 193 bits (493), Expect = 9e-54
Identities = 122/418 (29%), Positives = 186/418 (44%), Gaps = 20/418 (4%)
Query: 242 KDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDV- 300
AV AA+ AFP W + R I+ + EL++ + ++LA I+ E G L AQ +V
Sbjct: 3 DAAVAAARAAFPGWAALSLEERAAILRRFAELLKANKEELARLISRETGKPLWEAQTEVA 62
Query: 301 -LFG-LEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMF 358
+ G +++ +A T + + L + P GV A PFNFP P
Sbjct: 63 AMAGKIDISIKAYHERTGERATPMAQGRAVL-RHR---PHGVMAVFGPFNFPGHLPNGHI 118
Query: 359 SIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGTNDVINHICDDEDIKA 418
A+ GNT + KPSE P + ++ L EAGLP GVLN+V G + + E I
Sbjct: 119 VPALLAGNTVVFKPSELTPAVAELMVELWEEAGLPPGVLNLVQGGRETGEALAAHEGIDG 178
Query: 419 ISFVASSTASVQMYARAAAR-GKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGE 477
+ F S+ + ++ + A R GK + GG N ++ A IDA +V + F AG+
Sbjct: 179 LLFTGSAATGLLLHRQFAGRPGKILALEMGGNNPLVVWDVADIDAAAYLIVQSAFLTAGQ 238
Query: 478 RCTALSTAVFVGSSVQWE--DELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQN 535
RCT + +V + LVE AK L++ +GP++ + Q+
Sbjct: 239 RCTCARRLIVPDGAVGDAFLERLVEAAKRLRIGAPDAEPPFMGPLIIAAAAARYLLAQQD 298
Query: 536 AVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEE 595
+ G LL +V F+ P I+ DVT + EEIFGP+L + D +E
Sbjct: 299 LLALGGEPLLAMERLV----AGTAFLSPGII-DVTDAADVPDEEIFGPLLQVYRYDDFDE 353
Query: 596 AIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPVPSS-----FSSINESG 648
AI + N RF A + + +F I A +V N P + F + SG
Sbjct: 354 AIALANATRFGLSAGLLSDDEALFERFLARIRAGIVNWNRPTTGASSTAPFGGVGLSG 411
|
N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. Length = 431 |
| >gnl|CDD|182108 PRK09847, PRK09847, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 194 bits (495), Expect = 2e-53
Identities = 146/481 (30%), Positives = 236/481 (49%), Gaps = 32/481 (6%)
Query: 205 FIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPA--WKNTPVAT 262
FI G++ + T + ++P TQ +++ + AV AA+ F W + A
Sbjct: 23 FINGEYTAAAENETFETVDPVTQAPLAKIARGKSVDIDRAVSAARGVFERGDWSLSSPAK 82
Query: 263 RQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQI-GEF 321
R+ ++ KL +L+ ++LA+ T++ G ++ + RD + G + A A ++ GE
Sbjct: 83 RKAVLNKLADLMEAHAEELALLETLDTGKPIRHSLRDDIPGAARAIRWYAEAIDKVYGEV 142
Query: 322 VPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSM 381
+ L REP+GV A I P+NFP + W A+ GN+ ILKPSEK+P +++
Sbjct: 143 ATTSSHEL-AMIVREPVGVIAAIVPWNFPLLLTCWKLGPALAAGNSVILKPSEKSPLSAI 201
Query: 382 ILAALAMEAGLPDGVLNIVHG-TNDVINHICDDEDIKAISFVASSTASVQMYARAA-ARG 439
LA LA EAGLPDGVLN+V G ++ + DI AI+F S+ Q+ A +
Sbjct: 202 RLAGLAKEAGLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQLLKDAGDSNM 261
Query: 440 KRVQSNRGGKNYAIIMPDA-SIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWEDEL 498
KRV GGK+ I+ D + +A + F G+ C A T + + S+ DE
Sbjct: 262 KRVWLEAGGKSANIVFADCPDLQQAASATAAGIFYNQGQVCIA-GTRLLLEESIA--DEF 318
Query: 499 VELAKALKVNVGT----DASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPG 554
+ L K N D + +G ++ D + I+ G LLLDGRN +
Sbjct: 319 LALLKQQAQNWQPGHPLDPATTMGTLIDCAHADSVHSFIREGESKG-QLLLDGRNAGLAA 377
Query: 555 YENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTS 614
+GPTI DV N +EEIFGPVL+ + S E+A+++ N +++ GA+++T
Sbjct: 378 A-----IGPTIFVDVDPNASLSREEIFGPVLVVTRFTSEEQALQLANDSQYGLGAAVWTR 432
Query: 615 SGLAARKFQNEIEARLVGIN------VPVPSSFSSINESGEFNFCGKS--GVQFYTQIKT 666
A + ++A V +N + VP F +SG N KS ++ +T++KT
Sbjct: 433 DLSRAHRMSRRLKAGSVFVNNYNDGDMTVP--FGGYKQSG--NGRDKSLHALEKFTELKT 488
Query: 667 V 667
+
Sbjct: 489 I 489
|
Length = 494 |
| >gnl|CDD|143416 cd07098, ALDH_F15-22, Aldehyde dehydrogenase family 15A1 and 22A1-like | Back alignment and domain information |
|---|
Score = 191 bits (487), Expect = 1e-52
Identities = 133/476 (27%), Positives = 220/476 (46%), Gaps = 45/476 (9%)
Query: 223 NPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLA 282
+PAT + VP T E+ +A+ AA+ A W T A R++++ L + I + +++
Sbjct: 2 DPATGQHLGSVPADTPEDVDEAIAAARAAQREWAKTSFAERRKVLRSLLKYILENQEEIC 61
Query: 283 MNITVEQGTTL-KAAQRDVLFGLEVVEQACAVATLQIGEFVPNAL------CGLDTYCFR 335
+ G T+ A+ ++L E + TL+ GE AL GL + R
Sbjct: 62 RVACRDTGKTMVDASLGEILVTCEKIRW-----TLKHGE---KALRPESRPGGLLMFYKR 113
Query: 336 -----EPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSE-----KNPGTSMILAA 385
EPLGV I +N+P L A+ GN ++K SE S+I
Sbjct: 114 ARVEYEPLGVVGAIVSWNYPFHNLLGPIIAALFAGNAIVVKVSEQVAWSSGFFLSIIREC 173
Query: 386 LAMEAGLPDGVLNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAARG-KRVQS 444
LA G ++ +V + + I I+F+ S + AAA V
Sbjct: 174 LA-ACGHDPDLVQLVTCLPETAEALTSHPVIDHITFIGSPPVG-KKVMAAAAESLTPVVL 231
Query: 445 NRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWEDELVE---- 500
GGK+ AI++ DA +D + ++ F ++G+ C + V V + D+L+E
Sbjct: 232 ELGGKDPAIVLDDADLDQIASIIMRGTFQSSGQNCIGIER-VIVHEKIY--DKLLEILTD 288
Query: 501 LAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNF 560
+AL+ D DVG ++S D++ L+ +AV+ GA LL G+ P Y G++
Sbjct: 289 RVQALRQGPPLDGDVDVGAMISPARFDRLEELVADAVEKGARLLAGGKRYPHPEYPQGHY 348
Query: 561 VGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAAR 620
PT+L DVT +M+ +EE+FGPV++ M+A EEA+++ N + GAS+F AR
Sbjct: 349 FPPTLLVDVTPDMKIAQEEVFGPVMVVMKASDDEEAVEIANSTEYGLGASVFGKDIKRAR 408
Query: 621 KFQNEIEARLVGIN--------VPVPSSFSSINESGEFNFCGKSGVQFYTQIKTVA 668
+ +++E +V IN +P F + SG F G+ G++ K+V
Sbjct: 409 RIASQLETGMVAINDFGVNYYVQQLP--FGGVKGSGFGRFAGEEGLRGLCNPKSVT 462
|
Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. Length = 465 |
| >gnl|CDD|236501 PRK09407, gabD2, succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 191 bits (487), Expect = 6e-52
Identities = 146/540 (27%), Positives = 233/540 (43%), Gaps = 84/540 (15%)
Query: 186 TSASPSGVSPNIDNNRVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAV 245
T+A P + R+ VD T +V P T E + VP++T + + A
Sbjct: 3 TTALPMPAPSALTFERLRRLTAR--VDGAAGPTREVTAPFTGEPLATVPVSTAADVEAAF 60
Query: 246 DAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLE 305
A+ A AW TPV R ++ + +L+ + ++L + +E G + A +VL
Sbjct: 61 ARARAAQRAWAATPVRERAAVLLRFHDLVLENREELLDLVQLETGKARRHAFEEVL---- 116
Query: 306 VVEQACAVATLQIG---------EFVPNALCGL-DTYCFREPLGVCAGICPFNFP----- 350
A+ AL L T R+P GV I P+N+P
Sbjct: 117 ----DVALTARYYARRAPKLLAPRRRAGALPVLTKTTELRQPKGVVGVISPWNYPLTLAV 172
Query: 351 -DMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGTNDVI-N 408
D P A+ GN +LKP + P T++ L EAGLP + +V G V+
Sbjct: 173 SDAIP------ALLAGNAVVLKPDSQTPLTALAAVELLYEAGLPRDLWQVVTGPGPVVGT 226
Query: 409 HICDDEDIKAISFVA--SSTASVQMYARAAARGKRVQSNR--------GGKNYAIIMPDA 458
+ D+ D ++ STA+ ++ A A R R GGKN I++ DA
Sbjct: 227 ALVDNAD-----YLMFTGSTATGRVLAEQAGR-------RLIGFSLELGGKNPMIVLDDA 274
Query: 459 SIDATLNALVSAGFGAAGERCTALSTA-VFVGSSVQWE--DELVELAKALKVNVGTDASA 515
+D V A F AG+ C +S ++V S+ E V +A+++ G D SA
Sbjct: 275 DLDKAAAGAVRACFSNAGQLC--ISIERIYVHESIYDEFVRAFVAAVRAMRLGAGYDYSA 332
Query: 516 DVGPVVSVEVKDQISRLIQNAVDNGASLLLDGR---NIVVPG---YENGNFVGPTILRDV 569
D+G ++S + +S + +AV GA++L G+ ++ G YE PT+L V
Sbjct: 333 DMGSLISEAQLETVSAHVDDAVAKGATVLAGGKARPDL---GPLFYE------PTVLTGV 383
Query: 570 TSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEAR 629
T +ME +EE FGPV+ ++EA++ N + AS++T R I A
Sbjct: 384 TPDMELAREETFGPVVSVYPVADVDEAVERANDTPYGLNASVWTGDTARGRAIAARIRAG 443
Query: 630 LVGINVPVPSSFSSIN-------ESGEFNFCGKSGVQFYTQIKTVAQQ--WNDLPKLGMP 680
V +N +++ S++ +SG G G+ YT+ +T+A Q P GMP
Sbjct: 444 TVNVNEGYAAAWGSVDAPMGGMKDSGLGRRHGAEGLLKYTESQTIATQRVLPLAPPPGMP 503
|
Length = 524 |
| >gnl|CDD|215259 PLN02466, PLN02466, aldehyde dehydrogenase family 2 member | Back alignment and domain information |
|---|
Score = 191 bits (486), Expect = 8e-52
Identities = 146/507 (28%), Positives = 220/507 (43%), Gaps = 59/507 (11%)
Query: 193 VSPNIDNNRVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAF 252
++P + + I G+FVD T ++P T EV + V E+ AV AA++AF
Sbjct: 49 ITPPVQVSYTQLLINGQFVDAASGKTFPTLDPRTGEVIAHVAEGDAEDVNRAVAAARKAF 108
Query: 253 P--AWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQR------------ 298
W R RI+ + +L+ + D+LA T + G + + +
Sbjct: 109 DEGPWPKMTAYERSRILLRFADLLEKHNDELAALETWDNGKPYEQSAKAELPMFARLFRY 168
Query: 299 -----DVLFGLEV-VEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDM 352
D + GL V + V TL EP+GV I P+NFP +
Sbjct: 169 YAGWADKIHGLTVPADGPHHVQTLH------------------EPIGVAGQIIPWNFPLL 210
Query: 353 TPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGTNDVIN-HIC 411
W A+ CGNT +LK +E+ P +++ A L EAGLP GVLN+V G +
Sbjct: 211 MFAWKVGPALACGNTIVLKTAEQTPLSALYAAKLLHEAGLPPGVLNVVSGFGPTAGAALA 270
Query: 412 DDEDIKAISFVASS-TASVQMYARAAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSA 470
D+ ++F S+ T + + A + K V GGK+ I+ DA +D + A
Sbjct: 271 SHMDVDKLAFTGSTDTGKIVLELAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFA 330
Query: 471 GFGAAGERCTALSTAVFVGSSVQWEDELVELAK--ALKVNVGTDASADV--GPVVSVEVK 526
F G+ C A S FV V DE VE AK ALK VG V GP + E
Sbjct: 331 LFFNQGQCCCAGSRT-FVHERVY--DEFVEKAKARALKRVVGDPFKKGVEQGPQIDSEQF 387
Query: 527 DQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLL 586
++I R I++ V++GA+L G GY ++ PT+ +V +M ++EIFGPV
Sbjct: 388 EKILRYIKSGVESGATLECGGDRFGSKGY----YIQPTVFSNVQDDMLIAQDEIFGPVQS 443
Query: 587 NMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGIN------VPVPSS 640
++ L+E I+ N R+ A +FT + A + V +N +P
Sbjct: 444 ILKFKDLDEVIRRANNTRYGLAAGVFTQNLDTANTLSRALRVGTVWVNCFDVFDAAIP-- 501
Query: 641 FSSINESGEFNFCGKSGVQFYTQIKTV 667
F SG G + Y Q+K V
Sbjct: 502 FGGYKMSGIGREKGIYSLNNYLQVKAV 528
|
Length = 538 |
| >gnl|CDD|215260 PLN02467, PLN02467, betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 189 bits (482), Expect = 1e-51
Identities = 144/490 (29%), Positives = 233/490 (47%), Gaps = 26/490 (5%)
Query: 205 FIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPA-----WKNTP 259
FIGG++ + I V+NPAT+E +P T E+ AV+AA++AF W T
Sbjct: 11 FIGGEWREPVLGKRIPVVNPATEETIGDIPAATAEDVDAAVEAARKAFKRNKGKDWARTT 70
Query: 260 VATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQ---RDVLFGLE-VVEQACAVAT 315
A R + + + I +LA T++ G L A DV E + A A+
Sbjct: 71 GAVRAKYLRAIAAKITERKSELAKLETLDCGKPLDEAAWDMDDVAGCFEYYADLAEALDA 130
Query: 316 LQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEK 375
Q V + Y +EPLGV I P+N+P + W + A+ G T +LKPSE
Sbjct: 131 KQ-KAPVSLPMETFKGYVLKEPLGVVGLITPWNYPLLMATWKVAPALAAGCTAVLKPSEL 189
Query: 376 NPGTSMILAALAMEAGLPDGVLNIVHGT-NDVINHICDDEDIKAISFVASSTASVQMYAR 434
T + LA + E GLP GVLN+V G + + + I+F S+ ++
Sbjct: 190 ASVTCLELADICREVGLPPGVLNVVTGLGTEAGAPLASHPGVDKIAFTGSTATGRKIMTA 249
Query: 435 AAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGA---AGERCTALSTAVFVGSS 491
AA K V GGK+ I+ D +D A+ A FG G+ C+A S + V
Sbjct: 250 AAQMVKPVSLELGGKSPIIVFDDVDLD---KAVEWAMFGCFWTNGQICSATSR-LLVHER 305
Query: 492 VQWE--DELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRN 549
+ E ++LV+ AK +K++ + +GPVVS +++ + I A GA++L G+
Sbjct: 306 IASEFLEKLVKWAKNIKISDPLEEGCRLGPVVSEGQYEKVLKFISTAKSEGATILCGGKR 365
Query: 550 IVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGA 609
+ G F+ PTI+ DVT++M+ ++EE+FGPVL + +EAI++ N + +
Sbjct: 366 --PEHLKKGFFIEPTIITDVTTSMQIWREEVFGPVLCVKTFSTEDEAIELANDSHYGLAG 423
Query: 610 SIFTSSGLAARKFQNEIEARLVGINVPVP----SSFSSINESGEFNFCGKSGVQFYTQIK 665
++ ++ + +A +V IN P + + I SG G+ G++ Y +K
Sbjct: 424 AVISNDLERCERVSEAFQAGIVWINCSQPCFCQAPWGGIKRSGFGRELGEWGLENYLSVK 483
Query: 666 TVAQQWNDLP 675
V + +D P
Sbjct: 484 QVTKYISDEP 493
|
Length = 503 |
| >gnl|CDD|143448 cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B | Back alignment and domain information |
|---|
Score = 188 bits (480), Expect = 2e-51
Identities = 127/412 (30%), Positives = 202/412 (49%), Gaps = 22/412 (5%)
Query: 215 GSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELI 274
G + I+PA E ++V T E+++ + AA+ AF W++ P R I+ ++ + +
Sbjct: 10 GGGVVTSISPANGEPIARVRQATPEDYESTIKAAQEAFKEWRDVPAPKRGEIVRQIGDAL 69
Query: 275 RRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVPNALCG---LDT 331
R+ + L +++E G L +V +++ + A ++ G +P+ G ++
Sbjct: 70 RKKKEALGKLVSLEMGKILPEGLGEVQEMIDICDFAVGLSRQLYGLTIPSERPGHRMMEQ 129
Query: 332 YCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSM----ILAALA 387
+ PLGV I FNFP W +IA+ CGN + KPS P T++ I+A +
Sbjct: 130 W---NPLGVVGVITAFNFPVAVWGWNAAIALVCGNVVVWKPSPTTPLTAIAVTKIVARVL 186
Query: 388 MEAGLPDGVLNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRG 447
+ GLP + ++V G DV + D + +SF S+ Q+ AAR R G
Sbjct: 187 EKNGLPGAIASLVCGGADVGEALVKDPRVPLVSFTGSTAVGRQVGQAVAARFGRSLLELG 246
Query: 448 GKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWEDELVE-LAKALK 506
G N I+M DA +D + A++ A G AG+RCT + V S+ DE++E L KA K
Sbjct: 247 GNNAIIVMEDADLDLAVRAVLFAAVGTAGQRCTTTRR-LIVHESIY--DEVLERLKKAYK 303
Query: 507 -VNVG--TDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGP 563
V +G D VGP+ + D I+ A G ++L G+ I P GN+V P
Sbjct: 304 QVRIGDPLDDGTLVGPLHTKAAVDNYLAAIEEAKSQGGTVLFGGKVIDGP----GNYVEP 359
Query: 564 TILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSS 615
TI+ S+ KEE F P+L ++ D+LEEAI N +SIFT+
Sbjct: 360 TIVE-GLSDAPIVKEETFAPILYVLKFDTLEEAIAWNNEVPQGLSSSIFTTD 410
|
Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. Length = 474 |
| >gnl|CDD|143429 cd07111, ALDH_F16, Aldehyde dehydrogenase family 16A1-like | Back alignment and domain information |
|---|
Score = 188 bits (480), Expect = 2e-51
Identities = 125/438 (28%), Positives = 205/438 (46%), Gaps = 29/438 (6%)
Query: 205 FIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQ 264
FI GK+V + INPAT EV + V E+ AV AA+ AF +W P R
Sbjct: 25 FINGKWVKPENRKSFPTINPATGEVLASVLQAEEEDVDAAVAAARTAFESWSALPGHVRA 84
Query: 265 RIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQI----GE 320
R ++++ I++ A+ +++ G ++ + RD L +
Sbjct: 85 RHLYRIARHIQKHQRLFAVLESLDNGKPIRES-RDCDIPL-------VARHFYHHAGWAQ 136
Query: 321 FVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTS 380
+ L G +P+GV I P+NFP + W A+ GNT +LKP+E P T+
Sbjct: 137 LLDTELAG------WKPVGVVGQIVPWNFPLLMLAWKICPALAMGNTVVLKPAEYTPLTA 190
Query: 381 MILAALAMEAGLPDGVLNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYARA-AARG 439
++ A + EAGLP GVLNIV G + + + + ++F ST + RA A G
Sbjct: 191 LLFAEICAEAGLPPGVLNIVTGNGSFGSALANHPGVDKVAFTG-STEVGRALRRATAGTG 249
Query: 440 KRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWED--- 496
K++ GGK+ I+ DA +D+ + +V A + G+ C A S + V SV E+
Sbjct: 250 KKLSLELGGKSPFIVFDDADLDSAVEGIVDAIWFNQGQVCCAGSR-LLVQESV-AEELIR 307
Query: 497 ELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYE 556
+L E L+V D + D+G +V +I L++ GA + G ++ G
Sbjct: 308 KLKERMSHLRVGDPLDKAIDMGAIVDPAQLKRIRELVEEGRAEGADVFQPGADLPSKGP- 366
Query: 557 NGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSG 616
F PT+ +V +EEIFGPVL+ + + +EA+ + N + AS+++ +
Sbjct: 367 ---FYPPTLFTNVPPASRIAQEEIFGPVLVVLTFRTAKEAVALANNTPYGLAASVWSENL 423
Query: 617 LAARKFQNEIEARLVGIN 634
A + ++A +V IN
Sbjct: 424 SLALEVALSLKAGVVWIN 441
|
Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. Length = 480 |
| >gnl|CDD|143438 cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like | Back alignment and domain information |
|---|
Score = 187 bits (476), Expect = 3e-51
Identities = 125/423 (29%), Positives = 201/423 (47%), Gaps = 18/423 (4%)
Query: 222 INPATQEVGSQVPLTTYEEFKDAVDAAKRAF--PAWKNTPVATRQRIMFKLQELIRRDID 279
I+PAT EV E + A+ AA+RAF W + P R R++ +L + + +
Sbjct: 2 IDPATGEVIGTYADGGVAEAEAAIAAARRAFDETDWAHDP-RLRARVLLELADAFEANAE 60
Query: 280 KLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIG---EFVPNALCGLDTYCFRE 336
+LA + +E G L A+ ++ + + +A + G E P + + RE
Sbjct: 61 RLARLLALENGKILGEARFEISGAISELRYYAGLARTEAGRMIEPEPGSFSLV----LRE 116
Query: 337 PLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGT-SMILAALAMEAGLPDG 395
P+GV I P+N P + + + A+ G T ++KP+ + + I+ LA LP G
Sbjct: 117 PMGVAGIIVPWNSPVVLLVRSLAPALAAGCTVVVKPAGQTAQINAAIIRILAEIPSLPAG 176
Query: 396 VLNIVHG-TNDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAII 454
V+N+ ++ H+ D+ ISF S+ + A AA KR+ GGK I+
Sbjct: 177 VVNLFTESGSEGAAHLVASPDVDVISFTGSTATGRAIMAAAAPTLKRLGLELGGKTPCIV 236
Query: 455 MPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV--QWEDELVELAKALKVNVGTD 512
DA +DA L L A AG+ C A S V V S+ + D L A+KV G D
Sbjct: 237 FDDADLDAALPKLERALTIFAGQFCMAGSR-VLVQRSIADEVRDRLAARLAAVKVGPGLD 295
Query: 513 ASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSN 572
++D+GP++ D++ R+++ A+ GA ++L G V G G F+ PT+L +
Sbjct: 296 PASDMGPLIDRANVDRVDRMVERAIAAGAEVVLRGGP-VTEGLAKGAFLRPTLLEVDDPD 354
Query: 573 MECYKEEIFGPVLLNMQADSLE-EAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLV 631
+ +EEIFGPV L ++ E EA+ + N + AS++T A + I A V
Sbjct: 355 ADIVQEEIFGPV-LTLETFDDEAEAVALANDTDYGLAASVWTRDLARAMRVARAIRAGTV 413
Query: 632 GIN 634
IN
Sbjct: 414 WIN 416
|
Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. Length = 455 |
| >gnl|CDD|143419 cd07101, ALDH_SSADH2_GabD2, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like | Back alignment and domain information |
|---|
Score = 181 bits (461), Expect = 3e-49
Identities = 130/480 (27%), Positives = 207/480 (43%), Gaps = 58/480 (12%)
Query: 222 INPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKL 281
P T E ++P +T + + A A+ A AW P A R + + +L+ D+L
Sbjct: 1 EAPFTGEPLGELPQSTPADVEAAFARARAAQRAWAARPFAERAAVFLRFHDLVLERRDEL 60
Query: 282 AMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIG---------EFVPNALCGL-DT 331
I +E G + A +VL A+ A+ L T
Sbjct: 61 LDLIQLETGKARRHAFEEVL--------DVAIVARYYARRAERLLKPRRRRGAIPVLTRT 112
Query: 332 YCFREPLGVCAGICPFNFPDMTPLWMFSIAVT-------CGNTFILKPSEKNPGTSMILA 384
R P GV I P+N+P ++AV+ GN +LKP + T++
Sbjct: 113 TVNRRPKGVVGVISPWNYP-------LTLAVSDAIPALLAGNAVVLKPDSQTALTALWAV 165
Query: 385 ALAMEAGLPDGVLNIVHGTNDVI-NHICDDEDIKAISFVASSTASVQMYARAAARGKRVQ 443
L +EAGLP + +V G + I D+ D + F S+ + RA R
Sbjct: 166 ELLIEAGLPRDLWQVVTGPGSEVGGAIVDNADY--VMFTGSTATGRVVAERAGRRLIGCS 223
Query: 444 SNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWE--DELVEL 501
GGKN I++ DA +D V A F AG+ C ++ ++V SV E V
Sbjct: 224 LELGGKNPMIVLEDADLDKAAAGAVRACFSNAGQLCVSIER-IYVHESVYDEFVRRFVAR 282
Query: 502 AKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPG-----YE 556
+AL++ D D+G ++S D+++ + +AV GA++L GR P YE
Sbjct: 283 TRALRLGAALDYGPDMGSLISQAQLDRVTAHVDDAVAKGATVLAGGR--ARPDLGPYFYE 340
Query: 557 NGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSG 616
PT+L VT +ME + EE FGPV+ + +EAI++ N + AS++T G
Sbjct: 341 ------PTVLTGVTEDMELFAEETFGPVVSIYRVADDDEAIELANDTDYGLNASVWTRDG 394
Query: 617 LAARKFQNEIEARLVGINVPVPSSFSSIN-------ESGEFNFCGKSGVQFYTQIKTVAQ 669
R+ + A V +N ++++SI+ +SG G G+ YT+ +TVA
Sbjct: 395 ARGRRIAARLRAGTVNVNEGYAAAWASIDAPMGGMKDSGLGRRHGAEGLLKYTETQTVAV 454
|
Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). Length = 454 |
| >gnl|CDD|143434 cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Score = 178 bits (452), Expect = 7e-48
Identities = 136/468 (29%), Positives = 209/468 (44%), Gaps = 37/468 (7%)
Query: 204 NFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATR 263
NFIGG++V D I P T +V +VP +T E+ + A+DAA A AW T VA R
Sbjct: 3 NFIGGEWVAPVKGEYFDNITPVTGKVFCEVPRSTAEDIELALDAAHAAKEAWGKTSVAER 62
Query: 264 QRIMFKLQELIRRDIDKLAMNITVEQGT----TLKAAQRDVLFGLEVVEQACAVATLQIG 319
I+ K+ + + +++ LA+ T + G TL A D+ ++ Q G
Sbjct: 63 ANILNKIADRMEANLEMLAVAETWDNGKPVRETLAA---DIPLAIDHFRYFAGCIRAQEG 119
Query: 320 EFVPNALCGLD----TYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEK 375
++ +D Y F EPLGV I P+NFP + W + A+ GN +LKP+E+
Sbjct: 120 -----SISEIDENTVAYHFHEPLGVVGQIIPWNFPLLMATWKLAPALAAGNCVVLKPAEQ 174
Query: 376 NPGTSMILAALAMEAGLPDGVLNIVHGTNDVI-NHICDDEDIKAISFVASSTASVQMYAR 434
P + ++L L + LP GV+N+V+G + + I ++F +T +
Sbjct: 175 TPASILVLMELIGDL-LPPGVVNVVNGFGLEAGKPLASSKRIAKVAFTGETTTGRLIMQY 233
Query: 435 AAARGKRVQSNRGGKNYAIIMP------DASIDATLNALVSAGFGAAGERCTALSTAVFV 488
A+ V GGK+ I DA D L V GE CT S A+ +
Sbjct: 234 ASENIIPVTLELGGKSPNIFFADVMDADDAFFDKALEGFVMFALN-QGEVCTCPSRAL-I 291
Query: 489 GSSVQWEDELVELA----KALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLL 544
S+ D +E A KA+K D +G S+E ++I I + GA +L
Sbjct: 292 QESIY--DRFMERALERVKAIKQGNPLDTETMIGAQASLEQLEKILSYIDIGKEEGAEVL 349
Query: 545 LDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNR 604
G + G G + PT + + M ++EEIFGPVL EEA+++ N
Sbjct: 350 TGGERNELGGLLGGGYYVPTTFKG-GNKMRIFQEEIFGPVLAVTTFKDEEEALEIANDTL 408
Query: 605 FVNGASIFTSSGLAARKFQNEIEARLVGINV----PVPSSFSSINESG 648
+ GA ++T G A + I+A V N P ++F +SG
Sbjct: 409 YGLGAGVWTRDGNTAYRMGRGIQAGRVWTNCYHLYPAHAAFGGYKQSG 456
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression. Length = 479 |
| >gnl|CDD|184426 PRK13968, PRK13968, putative succinate semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 174 bits (443), Expect = 8e-47
Identities = 127/469 (27%), Positives = 214/469 (45%), Gaps = 37/469 (7%)
Query: 222 INPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKL 281
+NPAT E S +P ++ ++A+ A F W+ T + R + + + + +R +++
Sbjct: 12 VNPATGEQLSVLPWAGADDIENALQLAAAGFRDWRETNIDYRAQKLRDIGKALRARSEEM 71
Query: 282 AMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYC-------- 333
A IT E G + A+ +V A E P L T
Sbjct: 72 AQMITREMGKPINQARAEV--------AKSANLCDWYAEHGPAMLKAEPTLVENQQAVIE 123
Query: 334 FREPLGVCAGICPFNFPDMTPLW-MFSIAVT---CGNTFILKPSEKNPGTSMILAALAME 389
+R PLG I P+NFP LW + AV GN ++LK + G + ++A + +
Sbjct: 124 YR-PLGTILAIMPWNFP----LWQVMRGAVPILLAGNGYLLKHAPNVMGCAQLIAQVFKD 178
Query: 390 AGLPDGVLNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGK 449
AG+P GV ++ ND ++ + +D I A++ S A + A+A A K+ GG
Sbjct: 179 AGIPQGVYGWLNADNDGVSQMINDSRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGS 238
Query: 450 NYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVF-VGSSVQWEDELVELAKALKVN 508
+ I++ DA ++ + A V+ + G+ C A + G + + + V A ALK+
Sbjct: 239 DPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIIEEGIASAFTERFVAAAAALKMG 298
Query: 509 VGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRD 568
D +GP+ +++D++ ++ + GA LLL G I GN+ PT+L +
Sbjct: 299 DPRDEENALGPMARFDLRDELHHQVEATLAEGARLLLGGEKIA----GAGNYYAPTVLAN 354
Query: 569 VTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEA 628
VT M ++EE+FGPV A E A+++ N + F A+IFT+ AR+ +E
Sbjct: 355 VTPEMTAFREELFGPVAAITVAKDAEHALELANDSEFGLSATIFTTDETQARQMAARLEC 414
Query: 629 RLVGINVPVPS----SFSSINESGEFNFCGKSGVQFYTQIKTVAQQWND 673
V IN S +F + +SG G+ + I+TV W D
Sbjct: 415 GGVFINGYCASDARVAFGGVKKSGFGRELSHFGLHEFCNIQTV---WKD 460
|
Length = 462 |
| >gnl|CDD|181826 PRK09406, gabD1, succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 171 bits (435), Expect = 7e-46
Identities = 133/469 (28%), Positives = 208/469 (44%), Gaps = 37/469 (7%)
Query: 219 IDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDI 278
I INPAT E T +E A+ A F ++ T A R R +L+ +
Sbjct: 3 IATINPATGETVKTFTALTDDEVDAAIARAHARFRDYRTTTFAQRARWANAAADLLEAEA 62
Query: 279 DKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVPNALCGLDT------- 331
D++A +T+E G TL +A+ + L CA E L
Sbjct: 63 DQVAALMTLEMGKTLASAKAEAL--------KCAKGFRYYAEHAEALLADEPADAAAVGA 114
Query: 332 ---YCFREPLGVCAGICPFNFPDMTPLWM---FSI-AVTCGNTFILKPSEKNPGTSMILA 384
Y +PLGV + P+NFP LW F+ A+ GN +LK + P T++ LA
Sbjct: 115 SRAYVRYQPLGVVLAVMPWNFP----LWQVVRFAAPALMAGNVGLLKHASNVPQTALYLA 170
Query: 385 ALAMEAGLPDGVLNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQS 444
L AG PDG + + + I D + A + S A + A A K+
Sbjct: 171 DLFRRAGFPDGCFQTLLVGSGAVEAILRDPRVAAATLTGSEPAGRAVAAIAGDEIKKTVL 230
Query: 445 NRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV--QWEDELVELA 502
GG + I+MP A +D V+A G+ C A + V + V + ++ V
Sbjct: 231 ELGGSDPFIVMPSADLDRAAETAVTARVQNNGQSCIA-AKRFIVHADVYDAFAEKFVARM 289
Query: 503 KALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVG 562
AL+V TD DVGP+ + + +D++ + + +AV GA++L G+ PG+ F
Sbjct: 290 AALRVGDPTDPDTDVGPLATEQGRDEVEKQVDDAVAAGATILCGGKRPDGPGW----FYP 345
Query: 563 PTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKF 622
PT++ D+T +M Y EE+FGPV + ++EAI++ N F G++ +T +F
Sbjct: 346 PTVITDITPDMRLYTEEVFGPVASLYRVADIDEAIEIANATTFGLGSNAWTRDEAEQERF 405
Query: 623 QNEIEARLVGINVPVPS----SFSSINESGEFNFCGKSGVQFYTQIKTV 667
+++EA V IN S F + SG G++ + IKTV
Sbjct: 406 IDDLEAGQVFINGMTVSYPELPFGGVKRSGYGRELSAHGIREFCNIKTV 454
|
Length = 457 |
| >gnl|CDD|181873 PRK09457, astD, succinylglutamic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 166 bits (423), Expect = 6e-44
Identities = 124/443 (27%), Positives = 191/443 (43%), Gaps = 25/443 (5%)
Query: 205 FIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQ 264
+I G ++ +G + NP + EV Q T + AV AA+ AFPAW RQ
Sbjct: 4 WINGDWIAGQG-EAFESRNPVSGEVLWQGNDATAAQVDAAVRAARAAFPAWARLSFEERQ 62
Query: 265 RIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVL-----FGLEVVEQACAVATLQIG 319
I+ + L+ + ++LA I E G L A +V + + QA T +
Sbjct: 63 AIVERFAALLEENKEELAEVIARETGKPLWEAATEVTAMINKIAISI--QAYHERTGEKR 120
Query: 320 EFVPNALCGLDTYCFR-EPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPG 378
+ + R P GV A P+NFP P A+ GNT + KPSE P
Sbjct: 121 SEMADG-----AAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPW 175
Query: 379 TSMILAALAMEAGLPDGVLNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAAR 438
+ + L +AGLP GVLN+V G + + DI + F S+ ++ + A +
Sbjct: 176 VAELTVKLWQQAGLPAGVLNLVQGGRETGKALAAHPDIDGLLFTGSANTGYLLHRQFAGQ 235
Query: 439 -GKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWE-- 495
K + GG N +I A IDA ++ ++ + F +AG+RCT + + V Q +
Sbjct: 236 PEKILALEMGGNNPLVIDEVADIDAAVHLIIQSAFISAGQRCTC-ARRLLVPQGAQGDAF 294
Query: 496 -DELVELAKALKVNVGTDASAD-VGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVP 553
LV +AK L V +G V+S + + + G LL+ +
Sbjct: 295 LARLVAVAKRLTVGRWDAEPQPFMGAVISEQAAQGLVAAQAQLLALGGKSLLEMTQLQ-- 352
Query: 554 GYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFT 613
+ P I+ DVT E EE FGP+L ++ D +EAI++ N RF A + +
Sbjct: 353 --AGTGLLTPGII-DVTGVAELPDEEYFGPLLQVVRYDDFDEAIRLANNTRFGLSAGLLS 409
Query: 614 SSGLAARKFQNEIEARLVGINVP 636
+F EI A +V N P
Sbjct: 410 DDREDYDQFLLEIRAGIVNWNKP 432
|
Length = 487 |
| >gnl|CDD|132284 TIGR03240, arg_catab_astD, succinylglutamic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 162 bits (413), Expect = 1e-42
Identities = 136/457 (29%), Positives = 203/457 (44%), Gaps = 24/457 (5%)
Query: 205 FIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQ 264
FI GK+ +G + NPATQEV Q + + + AV AA+ AFPAW + R
Sbjct: 2 FIDGKWRAGQG-ESFSSTNPATQEVLWQGAAASAAQVEAAVAAARAAFPAWARLSLEERI 60
Query: 265 RIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDV--LFG-LEVVEQACAVATLQIGEF 321
++ + L+ + LA I E G L + +V + G + + +A T GE
Sbjct: 61 AVVQRFAALLEERKEALARVIARETGKPLWETRTEVASMIGKVAISIKAYHERT---GE- 116
Query: 322 VPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSM 381
N + P GV A P+NFP P A+ GNT + KPSE P +
Sbjct: 117 SENPMPDGRAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPWVAE 176
Query: 382 ILAALAMEAGLPDGVLNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAAR-GK 440
L +AGLP GVLN+V G + + DI + F SS ++ + A R K
Sbjct: 177 ETVKLWEKAGLPAGVLNLVQGARETGVALAAHPDIDGLLFTGSSNTGHLLHRQFAGRPEK 236
Query: 441 RVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWE---DE 497
+ GG N I+ A IDA ++ ++ + F +AG+RCT + + V Q +
Sbjct: 237 ILALEMGGNNPLIVDEVADIDAAVHLIIQSAFISAGQRCTC-ARRLLVPDGAQGDAFLAR 295
Query: 498 LVELAKALKVNV-GTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYE 556
LVE+A+ L V + +G V+S++ ++ + G LL R +
Sbjct: 296 LVEVAERLTVGAWDAEPQPFMGAVISLQAAQRLLAAQAKLLALGGKSLLAMRQL----DP 351
Query: 557 NGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSG 616
+ P I+ DVT E EE FGP+L ++ D +EAI + N RF A + +
Sbjct: 352 GAALLTPGII-DVTGVAELPDEEHFGPLLQVIRYDDFDEAIAIANNTRFGLSAGLLSDDR 410
Query: 617 LAARKFQNEIEARLVGINVPV--PSS---FSSINESG 648
+F EI A +V N P+ SS F I SG
Sbjct: 411 ELYDRFLLEIRAGIVNWNKPLTGASSAAPFGGIGASG 447
|
Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism [Energy metabolism, Amino acids and amines]. Length = 484 |
| >gnl|CDD|132417 TIGR03374, ABALDH, 1-pyrroline dehydrogenase | Back alignment and domain information |
|---|
Score = 162 bits (410), Expect = 2e-42
Identities = 127/423 (30%), Positives = 194/423 (45%), Gaps = 30/423 (7%)
Query: 205 FIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQ 264
I G+ V G V NPAT EV ++ + E+ AV AA AF W T R
Sbjct: 5 LINGELVSGEGEK-QPVYNPATGEVILEIAEASAEQVDAAVRAADAAFAEWGQTTPKARA 63
Query: 265 RIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVAT-----LQIG 319
+ KL ++I + A + G L + D + + V + A A L G
Sbjct: 64 ECLLKLADVIEENAQVFAELESRNCGKPLHSVFNDEIPAIVDVFRFFAGAARCLSGLAAG 123
Query: 320 EFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGT 379
E+ L G + R+PLGV A I P+N+P M W + A+ GN +LKPSE P T
Sbjct: 124 EY----LEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLT 179
Query: 380 SMILAALAMEAGLPDGVLNIVHGTN-DVINHICDDEDIKAISFVASSTASVQMYARAAAR 438
++ LA LA + P GV+NI+ G V + + E ++ +S S + + A
Sbjct: 180 ALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHEKVRMVSLTGSIATGEHILSHTAPS 238
Query: 439 GKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWEDEL 498
KR GGK I+ DA IDA + + + GF AG+ CTA + ++ + D L
Sbjct: 239 IKRTHMELGGKAPVIVFDDADIDAVVEGVRTFGFYNAGQDCTA-ACRIYAQRGIY--DTL 295
Query: 499 VE-LAKA---LKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPG 554
VE L A LK D S ++GP+ S+ + R + AV+ +L G V+ G
Sbjct: 296 VEKLGAAVATLKSGAPDDESTELGPLSSLA---HLER-VMKAVEEAKAL---GHIKVITG 348
Query: 555 YE----NGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGAS 610
E NG + PT+L + ++E+FGPV+ D E+ + N +++ +S
Sbjct: 349 GEKRKGNGYYFAPTLLAGAKQDDAIVQKEVFGPVVSITSFDDEEQVVNWANDSQYGLASS 408
Query: 611 IFT 613
++T
Sbjct: 409 VWT 411
|
Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. Length = 472 |
| >gnl|CDD|143402 cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like | Back alignment and domain information |
|---|
Score = 161 bits (409), Expect = 4e-42
Identities = 117/415 (28%), Positives = 191/415 (46%), Gaps = 31/415 (7%)
Query: 205 FIGGKFVDLRGSATIDVINP-ATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATR 263
IGG++VD + ++P A EV E + A++AA AF WK+ P R
Sbjct: 22 VIGGEWVDTKERMVS--VSPFAPSEVVGTTAKADKAEAEAALEAAWAAFKTWKDWPQEDR 79
Query: 264 QRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVE-QACAVATLQIGEFV 322
R++ K +L+RR +L +T E G A DV ++ + A A L+
Sbjct: 80 ARLLLKAADLLRRRRRELIATLTYEVGKNWVEAIDDVAEAIDFIRYYARAALRLRYPAVE 139
Query: 323 PNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMI 382
G D F LG I P+NFP M V GNT I KP+E +++
Sbjct: 140 VVPYPGEDNESFYVGLGAGVVISPWNFPVAIFTGMIVAPVAVGNTVIAKPAE----DAVV 195
Query: 383 LAA----LAMEAGLPDGVLNIVHGTNDVI-NHICDDEDIKAISFVASSTASVQMYARAAA 437
+ + EAG P GV+ + G + + ++ + E I+ I+F S ++Y AA
Sbjct: 196 VGYKVFEIFHEAGFPPGVVQFLPGVGEEVGAYLTEHERIRGINFTGSLETGKKIYEAAAR 255
Query: 438 RG------KRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSS 491
KR+ GGKN I+ A + + +V + FG G++C+A S + +
Sbjct: 256 LAPGQTWFKRLYVETGGKNAIIVDETADFELVVEGVVVSAFGFQGQKCSAASR-LILTQG 314
Query: 492 VQWE---DELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGR 548
+E + L++ A+ L V + D+GPV+ E + ++ I++ + G L+L G+
Sbjct: 315 A-YEPVLERLLKRAERLSVGPPEENGTDLGPVIDAEQEAKVLSYIEHGKNEG-QLVLGGK 372
Query: 549 NIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVL--LNMQADSLEEAIKMVN 601
+ GY FV PT++ +V +EEIFGPVL + + D EA+++ N
Sbjct: 373 RLEGEGY----FVAPTVVEEVPPKARIAQEEIFGPVLSVIRYKDDDFAEALEVAN 423
|
ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. Length = 500 |
| >gnl|CDD|215110 PLN00412, PLN00412, NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 157 bits (398), Expect = 1e-40
Identities = 128/460 (27%), Positives = 208/460 (45%), Gaps = 36/460 (7%)
Query: 194 SPNIDNNRVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFP 253
+ +D + + G++ ++ + NP+T++ +V T EE A+++AK A
Sbjct: 8 AEILDGDVYKYYADGEWRTSSSGKSVAITNPSTRKTQYKVQACTQEEVNKAMESAKAAQK 67
Query: 254 AWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQAC-- 311
AW TP+ R ++ K +++ +A + E K A +V+ +++
Sbjct: 68 AWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVVRSGDLISYTAEE 127
Query: 312 AVATLQIGEF-VPNALCGLD--TYCF--REPLGVCAGICPFNFPDMTPLWMFSIAVTCGN 366
V L G+F V ++ G + YC + PLGV I PFN+P + + A+ GN
Sbjct: 128 GVRILGEGKFLVSDSFPGNERNKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGN 187
Query: 367 TFILKPSEKNPGTSMILAALAM-----EAGLPDGVLNIVHGTNDVI-NHICDDEDIKAIS 420
+LKP T +AAL M AG P G+++ V G I + + + IS
Sbjct: 188 AVVLKPP-----TQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPGVNCIS 242
Query: 421 FVASSTA-SVQMYARAAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERC 479
F T ++ A +Q GGK+ I++ DA +D ++ GF +G+RC
Sbjct: 243 FTGGDTGIAISKKAGMVP----LQMELGGKDACIVLEDADLDLAAANIIKGGFSYSGQRC 298
Query: 480 TALSTAVFVGSSVQWEDELVE--LAKALKVNVGT-DASADVGPVVSVEVKDQISRLIQNA 536
TA+ V V SV D LVE AK K+ VG + D+ PVVS + I L+ +A
Sbjct: 299 TAVK-VVLVMESVA--DALVEKVNAKVAKLTVGPPEDDCDITPVVSESSANFIEGLVMDA 355
Query: 537 VDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEA 596
+ GA+ + + GN + P +L +V +M EE FGPVL ++ +S+EE
Sbjct: 356 KEKGATFCQEWK-------REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEG 408
Query: 597 IKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVP 636
I N + F +FT A + +E V IN
Sbjct: 409 IHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSA 448
|
Length = 496 |
| >gnl|CDD|212007 TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, Rv0768 family | Back alignment and domain information |
|---|
Score = 156 bits (396), Expect = 2e-40
Identities = 137/489 (28%), Positives = 213/489 (43%), Gaps = 40/489 (8%)
Query: 205 FIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAF--PAWKNTPVAT 262
I GK V T +NPAT+EV T + A+ AA+RAF W + A
Sbjct: 4 LIDGKLVAGSAG-TFPTVNPATEEVLGVAADATAADMDAAIAAARRAFDETDW-SRDTAL 61
Query: 263 RQRIMFKLQELIRRDIDKLAMNITVEQGT--TLKAAQR------DVLFGLEVVEQACAVA 314
R R + +L++ +R +++L E G L A + D+ F ++ E
Sbjct: 62 RVRCLRQLRDALRAHVEELRELTIAEVGAPRMLTAGAQLEGPVDDLGFAADLAESY--AW 119
Query: 315 TLQIGEFVPNALCGLDTY--CFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKP 372
T +G P G+ T RE +GV I P+NFP L A+ GNT +LKP
Sbjct: 120 TTDLGVASP---MGIPTRRTLRREAVGVVGAITPWNFPHQINLAKLGPALAAGNTVVLKP 176
Query: 373 SEKNPGTSMILAALAME-AGLPDGVLNIVHGT-NDVINHICDDEDIKAISFVASSTASVQ 430
+ P + +L L E P GV+NIV + + + + D + +SF S+
Sbjct: 177 APDTPWCAAVLGELIAEHTDFPPGVVNIVTSSDHRLGALLAKDPRVDMVSFTGSTATGRA 236
Query: 431 MYARAAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGA---AGERCTALSTAVF 487
+ A AAA K+V GGK+ I++ DA + A A A F AG+ C A++T +
Sbjct: 237 VMADAAATLKKVFLELGGKSAFIVLDDADLAA---ACSMAAFTVCMHAGQGC-AITTRLV 292
Query: 488 VGSSVQWEDELVELAKA----LKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASL 543
V + DE V A A +K D GPV+S +D++ + AV G
Sbjct: 293 VPRARY--DEAVAAAAATMGSIKPGDPADPGTVCGPVISARQRDRVQSYLDLAVAEGGRF 350
Query: 544 LLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRN 603
G + G FV PT++ + +N +EEIFGPVL + D ++A+++ N +
Sbjct: 351 ACGGG--RPADRDRGFFVEPTVIAGLDNNARVAREEIFGPVLTVIAHDGDDDAVRIANDS 408
Query: 604 RFVNGASIFTSSGLAARKFQNEIEARLVGINVPVPSS----FSSINESGEFNFCGKSGVQ 659
+ ++F + A + V +N V S F +SG G +G +
Sbjct: 409 PYGLSGTVFGADPERAAAVAARVRTGTVNVNGGVWYSADAPFGGYKQSGIGREMGVAGFE 468
Query: 660 FYTQIKTVA 668
Y + K +A
Sbjct: 469 EYLETKLIA 477
|
This family describes a branch of the aldehyde dehydrogenase (NAD) family (see pfam00171) that includes Rv0768 from Mycobacterium tuberculosis. All members of this family belong to species predicted to synthesize mycofactocin, suggesting that this enzyme or another upstream or downstream in the same pathway might be mycofactocin-dependent. However, the taxonomic range of this family is not nearly broad enough to make that relationship conclusive [Unknown function, Enzymes of unknown specificity]. Length = 480 |
| >gnl|CDD|143443 cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA | Back alignment and domain information |
|---|
Score = 155 bits (394), Expect = 5e-40
Identities = 118/420 (28%), Positives = 172/420 (40%), Gaps = 47/420 (11%)
Query: 205 FIGGKFVDLRGSATIDVINPATQE--VGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVAT 262
I G+ + VI+PA E +G V L E+ A+ A AF W TPV
Sbjct: 36 IINGE--ETETGEGAPVIDPADHERTIGE-VSLADAEDVDAALAIAAAAFAGWSATPVEE 92
Query: 263 RQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAV------ATL 316
R I+ K +L+ + +L E G TL A D EV E A+ A
Sbjct: 93 RAEILEKAADLLEANRGELIALAAAEAGKTLADA--DA----EVRE---AIDFCRYYAAQ 143
Query: 317 QIGEFVPNALCG----LDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKP 372
F L G L+ GV I P+NFP + A+ GNT I KP
Sbjct: 144 ARELFSDPELPGPTGELNGLEL-HGRGVFVCISPWNFPLAIFTGQIAAALAAGNTVIAKP 202
Query: 373 SEKNPGTSMILAALAMEAGLPDGVLNIVHGTNDVI-NHICDDEDIKAISFVASS-TASVQ 430
+E+ P + L EAG+P VL +V G + I + I + F S+ TA +
Sbjct: 203 AEQTPLIAARAVELLHEAGVPRDVLQLVPGDGEEIGEALVAHPRIDGVIFTGSTETAKLI 262
Query: 431 MYARAAARGKRVQSN--RGGKNYAIIMPDASID-ATLNALVSAGFGAAGERCTALSTAVF 487
A A G + GGKN I+ A + A + + SA FG+AG+RC+AL
Sbjct: 263 NRALAERDGPILPLIAETGGKNAMIVDSTALPEQAVKDVVQSA-FGSAGQRCSALRLLYL 321
Query: 488 VGS-SVQWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLD 546
+ ++ + L +LKV D S DVGP++ + +
Sbjct: 322 QEEIAERFIEMLKGAMASLKVGDPWDLSTDVGPLIDKPAGKLLRAHTELMRGEA------ 375
Query: 547 GRNIVVPGY---ENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADS--LEEAIKMVN 601
++ P NG FV P I+ V E+FGP+L ++ + L+EAI+ +N
Sbjct: 376 --WLIAPAPLDDGNGYFVAPGIIEIVGIF--DLTTEVFGPILHVIRFKAEDLDEAIEDIN 431
|
The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Length = 518 |
| >gnl|CDD|132294 TIGR03250, PhnAcAld_DH, putative phosphonoacetaldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 153 bits (388), Expect = 1e-39
Identities = 129/481 (26%), Positives = 213/481 (44%), Gaps = 51/481 (10%)
Query: 217 ATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRR 276
I+V P V VP + ++ + A A P R I+ + L+
Sbjct: 17 RVIEVRYPYNGTVVGTVPKASVDDVRRAFAIAAAYRPTLTRY---ERSAILDRAAALLAA 73
Query: 277 DIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVPNALCGLDT----- 331
++++ IT+E G + K + +V +V+ A A A G+ C L
Sbjct: 74 RKEEISDLITLESGLSKKDSLYEVGRVADVLTFAAAEALRDDGQIFS---CDLTPHGKAR 130
Query: 332 --YCFREPL-GVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAM 388
+ REPL GV + I PFN P + A+ N ++KPSEK P +++ LA +
Sbjct: 131 KVFTQREPLLGVISAITPFNHPMNQVAHKIAPAIATNNRMVVKPSEKTPLSALYLADILY 190
Query: 389 EAGLPDGVLNIVHG-TNDVINHICDDEDIKAISFVASSTASVQMYARAAARG--KRVQSN 445
EAGLP +L +V G ++ + + + + ++F T V + AAR +R
Sbjct: 191 EAGLPPQMLQVVTGDPREIADELITNPHVDLVTF----TGGVAIGKYIAARAGYRRQVLE 246
Query: 446 RGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV--QWEDELVELAK 503
GG + I+M DA +D + V + +G+RCTA+ + V SV ++ + LVE +
Sbjct: 247 LGGNDPLIVMEDADLDRAADLAVKGSYKNSGQRCTAVKR-MLVQESVADRFTELLVEKTR 305
Query: 504 ALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLL-DGRNIVVPGYENGNFVG 562
A + D S D+G V+ + A+ GA LLL + R+ G
Sbjct: 306 AWRYGDPMDPSVDMGTVIDEAAAILFEARVNEAIAQGARLLLGNVRD--------GALYA 357
Query: 563 PTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKF 622
PT+L V +M +EE FGPV ++ +++AI++ N + + + T+ +F
Sbjct: 358 PTVLDRVDPSMTLVREETFGPVSPVIRFCDIDDAIRISNSTAYGLSSGVCTNRLDYITRF 417
Query: 623 QNEIEARLVG-INV-PVP------SSFSSINESGEFNFCGKSGVQ----FYTQIKTVAQQ 670
E++ VG +NV VP + F I +SG K GVQ +T +KT +
Sbjct: 418 IAELQ---VGTVNVWEVPGYRLELTPFGGIKDSG---LGYKEGVQEAMKSFTNLKTYSLP 471
Query: 671 W 671
W
Sbjct: 472 W 472
|
This family of genes are members of the pfam00171 NAD-dependent aldehyde dehydrogenase family. These genes are observed in Ralstonia eutropha JMP134, Sinorhizobium meliloti 1021, Burkholderia mallei ATCC 23344, Burkholderia thailandensis E264, Burkholderia cenocepacia AU 1054, Burkholderia pseudomallei K96243 and 1710b, Burkholderia xenovorans LB400, Burkholderia sp. 383 and Polaromonas sp. JS666 in close proximity to the PhnW gene (TIGR02326) encoding 2-aminoethyl phosphonate aminotransferase (which generates phosphonoacetaldehyde) and PhnA (TIGR02335) encoding phosphonoacetate hydrolase (not to be confused with the alkylphosphonate utilization operon protein PhnA modeled by TIGR00686). Additionally, transporters believed to be specific for 2-aminoethyl phosphonate are often present. PhnW is, in other organisms, coupled with PhnX (TIGR01422) for the degradation of phosphonoacetaldehyde (GenProp0238), but PhnX is apparently absent in each of the organisms containing this aldehyde reductase. PhnA, characterized in a strain of Pseudomonas fluorescens that has not het been genome sequenced, is only rarely found outside of the PhnW and aldehyde dehydrogenase context. For instance in Rhodopseudomonas and Bordetella bronchiseptica, where it is adjacent to transporters presumably specific for the import of phosphonoacetate. It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. Length = 472 |
| >gnl|CDD|143466 cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Score = 141 bits (358), Expect = 8e-36
Identities = 124/424 (29%), Positives = 185/424 (43%), Gaps = 17/424 (4%)
Query: 219 IDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKN-TPVATRQRIMFKLQELIRRD 277
++V+NP + +VP + A+D A F N P R I+ +L +L+
Sbjct: 1 LEVVNPFDLKPIGEVPTVDWAAIDKALDTAHALFLDRNNWLPAHERIAILERLADLMEER 60
Query: 278 IDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVPNALC----GLDTYC 333
D+LA+ I E G L A+ +V ++ VE A G +P L G +
Sbjct: 61 ADELALLIAREGGKPLVDAKVEVTRAIDGVELAADELGQLGGREIPMGLTPASAGRIAFT 120
Query: 334 FREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLP 393
REP+GV I FN P + + A+ G I+KP+ P + + L EAGLP
Sbjct: 121 TREPIGVVVAISAFNHPLNLIVHQVAPAIAAGCPVIVKPALATPLSCLAFVDLLHEAGLP 180
Query: 394 DGVLNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYARA-AARGKRVQSNRGGKNYA 452
+G V N V + D + SF+ S A V R+ A G R GG
Sbjct: 181 EGWCQAVPCENAVAEKLVTDPRVAFFSFIGS--ARVGWMLRSKLAPGTRCALEHGGAAPV 238
Query: 453 IIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWE--DELVELAKALKVNVG 510
I+ A +DA + LV GF AG+ C ++ VFV + + + L A+ L V
Sbjct: 239 IVDRSADLDAMIPPLVKGGFYHAGQVCVSVQR-VFVPAEIADDFAQRLAAAAEKLVVGDP 297
Query: 511 TDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVT 570
TD +VGP++ D++ + AV GA LL G+ + Y PT+L D
Sbjct: 298 TDPDTEVGPLIRPREVDRVEEWVNEAVAAGARLLCGGKRLSDTTYA------PTVLLDPP 351
Query: 571 SNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARL 630
+ + +EIFGPV+ D L+EAI N A++FT A K ++A
Sbjct: 352 RDAKVSTQEIFGPVVCVYSYDDLDEAIAQANSLPVAFQAAVFTKDLDVALKAVRRLDATA 411
Query: 631 VGIN 634
V +N
Sbjct: 412 VMVN 415
|
Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 455 |
| >gnl|CDD|177949 PLN02315, PLN02315, aldehyde dehydrogenase family 7 member | Back alignment and domain information |
|---|
Score = 139 bits (353), Expect = 8e-35
Identities = 106/418 (25%), Positives = 192/418 (45%), Gaps = 16/418 (3%)
Query: 205 FIGGKFVDLRGSA-TIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATR 263
++GG++ R + + +NPA + ++V + E++++ + A + A W P R
Sbjct: 24 YVGGEW---RANGPLVSSVNPANNQPIAEVVEASLEDYEEGLRACEEAAKIWMQVPAPKR 80
Query: 264 QRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVP 323
I+ ++ + +R +D L +++E G L +V +++ + A ++ G +P
Sbjct: 81 GEIVRQIGDALRAKLDYLGRLVSLEMGKILAEGIGEVQEIIDMCDFAVGLSRQLNGSIIP 140
Query: 324 NALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNP----GT 379
+ PLG+ I FNFP W IA+ CGN + K + P
Sbjct: 141 SERPNHMMMEVWNPLGIVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAM 200
Query: 380 SMILAALAMEAGLPDGVLNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAARG 439
+ ++A + + LP + G ++ I D I +SF SS + + AR
Sbjct: 201 TKLVAEVLEKNNLPGAIFTSFCGGAEIGEAIAKDTRIPLVSFTGSSKVGLMVQQTVNARF 260
Query: 440 KRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV--QWEDE 497
+ G N I+M DA I + +++ A G AG+RCT + + S+ ++
Sbjct: 261 GKCLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRR-LLLHESIYDDVLEQ 319
Query: 498 LVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYEN 557
L+ + K +K+ + +GP+ + E K + I+ G +L G I
Sbjct: 320 LLTVYKQVKIGDPLEKGTLLGPLHTPESKKNFEKGIEIIKSQGGKILTGGSAI----ESE 375
Query: 558 GNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSS 615
GNFV PTI+ +++ + + KEE+FGPVL M+ +LEEAI++ N +SIFT +
Sbjct: 376 GNFVQPTIV-EISPDADVVKEELFGPVLYVMKFKTLEEAIEINNSVPQGLSSSIFTRN 432
|
Length = 508 |
| >gnl|CDD|226683 COG4230, COG4230, Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 137 bits (346), Expect = 5e-33
Identities = 122/426 (28%), Positives = 193/426 (45%), Gaps = 63/426 (14%)
Query: 206 IGGKFVDLRGSATIDVINPATQE--VGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATR 263
+ G V G VINPA + VG+ V T + + A++AA A P W TP A R
Sbjct: 118 VNGAPVA--GGEPRPVINPADPDDIVGT-VTEATEADVEQALEAAVAAAPIWSATPPAER 174
Query: 264 QRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVP 323
I+ + +L+ + +L + E G TL A +V E V+ A F
Sbjct: 175 AAILERAADLMEAQMPQLMGLLVREAGKTLSNAIAEVR---EAVDFLRYYAGQARDTF-- 229
Query: 324 NALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMF----SIAVTCGNTFILKPSEKNPGT 379
G T+ PLG I P+NFP L +F + A+ GN+ + KP+E+ T
Sbjct: 230 ----GNLTH---RPLGPVVCISPWNFP----LAIFTGQIAAALAAGNSVLAKPAEQ---T 275
Query: 380 SMILA---ALAMEAGLPDGVLNIVHGTNDVIN-HICDDEDIKAISFVASS-TASVQMYAR 434
+I A L EAG+P GVL ++ G + + + D + + F S+ A +
Sbjct: 276 PLIAAQAVRLLHEAGVPPGVLQLLPGRGETVGAALTADARVAGVMFTGSTEVARLIQRQL 335
Query: 435 AAARGKRVQ--SNRGGKNYAIIMPDASIDA---TLNALVSAGFGAAGERCTALSTAVFVG 489
A +G+ + + GG+N I+ D+S A + L SA F +AG+RC+AL + +
Sbjct: 336 AKRQGRPIPLIAETGGQNAMIV--DSSALAEQVVADVLASA-FDSAGQRCSALRV-LCLQ 391
Query: 490 SSVQWEDELVELAK----ALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLL 545
V D ++ + K L+V + DVGPV+ E K I + IQ ++
Sbjct: 392 EDV--ADRILTMLKGAMAELRVGNPDRLTTDVGPVIDAEAKANIEKHIQ-------TMRS 442
Query: 546 DGRNI----VVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVL--LNMQADSLEEAIKM 599
GR + + G FV PT++ N++ + E+FGPVL + + D L+E I
Sbjct: 443 KGRLVHQAAAPNSLQKGTFVAPTLIE--LENLDELQREVFGPVLHVVRYKRDELDEVIDQ 500
Query: 600 VNRNRF 605
+N +
Sbjct: 501 INATGY 506
|
Length = 769 |
| >gnl|CDD|143441 cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17 | Back alignment and domain information |
|---|
Score = 131 bits (332), Expect = 5e-32
Identities = 109/414 (26%), Positives = 173/414 (41%), Gaps = 62/414 (14%)
Query: 206 IGGKFVDLRGSATIDVINPATQEVGSQVPLTTY-----EEFKDAVDAAKRAFPAWKNTPV 260
IGGK V R T + P L TY + A++AA A W P
Sbjct: 37 IGGKEV--RTGNTGKQVMPHD----HAHVLATYHYADAALVEKAIEAALEARKEWARMPF 90
Query: 261 ATRQRIMFKLQELI----RRDIDKLAMNITVEQGTTLKAAQRDVL--------FGLEVVE 308
R I K +L+ R +++ M + QG + A+ D F ++ E
Sbjct: 91 EDRAAIFLKAADLLSGKYRYELNAATM---LGQGKNVWQAEIDAACELIDFLRFNVKYAE 147
Query: 309 QACAVATLQIGEFVPNALCGLDTYCFREPL-GVCAGICPFNFPDM------TPLWMFSIA 361
+ A L V N L Y PL G + PFNF + P M
Sbjct: 148 ELYAQQPLSSPAGVWNRL----EY---RPLEGFVYAVSPFNFTAIGGNLAGAPALM---- 196
Query: 362 VTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGTNDVI-NHICDDEDIKAIS 420
GN + KPS+ ++ ++ + EAGLP GV+N V G V+ + + + +
Sbjct: 197 ---GNVVLWKPSDTAVLSNYLVYKILEEAGLPPGVINFVPGDGPVVGDTVLASPHLAGLH 253
Query: 421 FVASSTASVQMYARAAAR-GK-----RVQSNRGGKNYAIIMPDASIDATLNALVSAGFGA 474
F S+ ++ + + R+ GGKN+ ++ P A +D+ + A V F
Sbjct: 254 FTGSTPTFKSLWKQIGENLDRYRTYPRIVGETGGKNFHLVHPSADVDSLVTATVRGAFEY 313
Query: 475 AGERCTALSTAVFVGSSV--QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRL 532
G++C+A S A +V S+ + ++ L+E K +K+ D S +G V+ + D+I
Sbjct: 314 QGQKCSAASRA-YVPESLWPEVKERLLEELKEIKMGDPDDFSNFMGAVIDEKAFDRIKGY 372
Query: 533 IQNA-VDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVL 585
I +A D A ++ G+ GY FV PT++ + EEIFGPVL
Sbjct: 373 IDHAKSDPEAEIIAGGKCDDSVGY----FVEPTVIETTDPKHKLMTEEIFGPVL 422
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences. Length = 522 |
| >gnl|CDD|237017 PRK11904, PRK11904, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 133 bits (336), Expect = 2e-31
Identities = 124/408 (30%), Positives = 182/408 (44%), Gaps = 72/408 (17%)
Query: 215 GSATIDVINPA--TQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQE 272
V++PA + VG +V E+ + A+ AA+ AFPAW TPV R I+ + +
Sbjct: 560 EGEARPVVSPADRRRVVG-EVAFADAEQVEQALAAARAAFPAWSRTPVEERAAILERAAD 618
Query: 273 LIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQA------CAVATLQIGEFVPNAL 326
L+ + +L E G TL+ D + EV E A A G P L
Sbjct: 619 LLEANRAELIALCVREAGKTLQ----DAI--AEVREAVDFCRYYAAQARRLFGA--PEKL 670
Query: 327 ---CGLDTYCFREPLGVCAGICPFNFPDMTPLWMF----SIAVTCGNTFILKPSEKNPGT 379
G GV I P+NFP L +F + A+ GNT I KP+E+ T
Sbjct: 671 PGPTGESNELRLHGRGVFVCISPWNFP----LAIFLGQVAAALAAGNTVIAKPAEQ---T 723
Query: 380 SMILAA---LAMEAGLPDGVLNIVHGTNDVI-NHICDDEDIKAISFVASSTASVQMYARA 435
+I A L EAG+P VL ++ G + + D I ++F ST + ++ R
Sbjct: 724 PLIAAEAVKLLHEAGIPKDVLQLLPGDGATVGAALTADPRIAGVAFTG-STETARIINRT 782
Query: 436 -AAR-GKRVQ--SNRGGKNYAIIMPDASIDATLNAL--------VSAGFGAAGERCTALS 483
AAR G V + GG+N A+I+ D+T AL V++ F +AG+RC+AL
Sbjct: 783 LAARDGPIVPLIAETGGQN-AMIV-----DST--ALPEQVVDDVVTSAFRSAGQRCSALR 834
Query: 484 TAVFVGSSVQWE--DELVEL----AKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAV 537
VQ + D ++E+ LKV S DVGPV+ E K + I+ +
Sbjct: 835 VLF-----VQEDIADRVIEMLKGAMAELKVGDPRLLSTDVGPVIDAEAKANLDAHIE-RM 888
Query: 538 DNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVL 585
A LL + G ENG+FV PT ++ + E+FGP+L
Sbjct: 889 KREARLLAQLP--LPAGTENGHFVAPTAFE--IDSISQLEREVFGPIL 932
|
Length = 1038 |
| >gnl|CDD|143406 cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins | Back alignment and domain information |
|---|
Score = 125 bits (316), Expect = 2e-30
Identities = 104/360 (28%), Positives = 159/360 (44%), Gaps = 52/360 (14%)
Query: 331 TYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEA 390
Y EPLGV I P+N+P L A+ GNT +LKPSE P TS +LA L +
Sbjct: 94 AYVIPEPLGVVLIIGPWNYPLQLALAPLIGAIAAGNTVVLKPSELAPATSALLAKL-IPK 152
Query: 391 GLPDGVLNIVHGTNDVINHICDDEDIKAISFVASS-TASVQMYARAAARGKRVQSNR--- 446
+ +V G +V + E I F S + M AAA+ +
Sbjct: 153 YFDPEAVAVVEGGVEVATALLA-EPFDHIFFTGSPAVGKIVM--EAAAK------HLTPV 203
Query: 447 ----GGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWEDELVE-L 501
GGK+ I+ DA+++ + F AG+ C A V V S+ +DEL+E L
Sbjct: 204 TLELGGKSPCIVDKDANLEVAARRIAWGKFLNAGQTCIAPDY-VLVHESI--KDELIEEL 260
Query: 502 AKALKVNVGTD--ASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGY--EN 557
KA+K G D S D G +++ + RL LLD +V+ G +
Sbjct: 261 KKAIKEFYGEDPKESPDYGRIIN---ERHFDRLAS---------LLDDGKVVIGGQVDKE 308
Query: 558 GNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGL 617
++ PTIL DV+ + +EEIFGP+L + D L+EAI+ +N +F+
Sbjct: 309 ERYIAPTILDDVSPDSPLMQEEIFGPILPILTYDDLDEAIEFINSRPKPLALYLFSED-- 366
Query: 618 AARKFQNEIEARL----VGIN-----VPVPSS-FSSINESGEFNFCGKSGVQFYTQIKTV 667
+ Q + A V +N +P+ F + SG + GK+G ++ +K+V
Sbjct: 367 --KAVQERVLAETSSGGVCVNDVLLHAAIPNLPFGGVGNSGMGAYHGKAGFDTFSHLKSV 424
|
ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. Length = 426 |
| >gnl|CDD|233325 TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) | Back alignment and domain information |
|---|
Score = 125 bits (315), Expect = 5e-30
Identities = 108/412 (26%), Positives = 180/412 (43%), Gaps = 33/412 (8%)
Query: 206 IGGKFVDLRGSATIDVINPATQE--VGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATR 263
IG + G A V NPA + VG QV + A+D+A++AFP W TP R
Sbjct: 42 IGHSYKA-DGEAQ-PVTNPADRRDIVG-QVFHANLAHVQAAIDSAQQAFPTWNATPAKER 98
Query: 264 QRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVP 323
+ +L +L+ + +L E G T+ A +V E V+ C Q+ + +
Sbjct: 99 AAKLDRLADLLELHMPELMALCVREAGKTIHNAIAEVR---EAVD-FCRYYAKQVRDVLG 154
Query: 324 NALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMIL 383
+ E GV I P+NFP S A+ GNT I KP+E+ +
Sbjct: 155 E-----FSV---ESRGVFVCISPWNFPLAIFTGQISAALAAGNTVIAKPAEQTSLIAYRA 206
Query: 384 AALAMEAGLPDGVLNIVHGT-NDVINHICDDEDIKAISFVASSTASVQMYARAAARGK-- 440
L EAG P G + ++ G DV + D I ++F S+ + + A R
Sbjct: 207 VELMQEAGFPAGTIQLLPGRGADVGAALTSDPRIAGVAFTGSTEVAQLINQTLAQREDAP 266
Query: 441 -RVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWEDELV 499
+ + GG+N I+ A + + ++ + F +AG+RC+AL + V V D ++
Sbjct: 267 VPLIAETGGQNAMIVDSTALPEQVVRDVLRSAFDSAGQRCSALRV-LCVQEDVA--DRVL 323
Query: 500 ELAKA----LKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGY 555
+ + LKV V + DVGPV+ E K + I++ + +
Sbjct: 324 TMIQGAMQELKVGVPHLLTTDVGPVIDAEAKQNLLAHIEHMSQTQKKIAQLTLDDSR-AC 382
Query: 556 ENGNFVGPTILRDVTSNMECYKEEIFGPVL--LNMQADSLEEAIKMVNRNRF 605
++G FV PT+ ++ EE+FGPVL + +A L++ + +N+ +
Sbjct: 383 QHGTFVAPTLFE--LDDIAELSEEVFGPVLHVVRYKARELDQIVDQINQTGY 432
|
This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase [Energy metabolism, Amino acids and amines]. Length = 500 |
| >gnl|CDD|143452 cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehyde dehydrogenase AlkH-like | Back alignment and domain information |
|---|
Score = 122 bits (308), Expect = 2e-29
Identities = 102/340 (30%), Positives = 151/340 (44%), Gaps = 53/340 (15%)
Query: 336 EPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDG 395
EP GVC I P+N+P A+ GNT ILKPSE P TS ++A + EA D
Sbjct: 99 EPKGVCLIISPWNYPFNLAFGPLVSAIAAGNTAILKPSELTPHTSAVIAKIIREAFDEDE 158
Query: 396 VLNIVHGTNDV--------INHICDDEDIKAISFVASSTASVQMYARAAARG-KRVQSNR 446
V + G +V +HI F S A ++ AAA+ V
Sbjct: 159 V-AVFEGDAEVAQALLELPFDHI----------FFTGSPAVGKIVMAAAAKHLASVTLEL 207
Query: 447 GGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWEDELVELAKA-L 505
GGK+ I+ A + + F AG+ C A VFV SV +D VE KA +
Sbjct: 208 GGKSPTIVDETADLKKAAKKIAWGKFLNAGQTCIAPDY-VFVHESV--KDAFVEHLKAEI 264
Query: 506 KVNVGTD----ASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFV 561
+ G D AS D+ +V+ D++ L+ +AV GA + G+ ++
Sbjct: 265 EKFYGKDAARKASPDLARIVNDRHFDRLKGLLDDAVAKGAKVEFGGQFD-----AAQRYI 319
Query: 562 GPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVN------------RNR-FVNG 608
PT+L +VT +M+ +EEIFGPVL + + L+E I+ +N +++ VN
Sbjct: 320 APTVLTNVTPDMKIMQEEIFGPVLPIITYEDLDEVIEYINAKPKPLALYVFSKDKANVNK 379
Query: 609 ASIFTSSGLAARKFQNEIEARLVGINVPVPSSFSSINESG 648
TSSG N++ + N+P F +N SG
Sbjct: 380 VLARTSSGGVV---VNDVVLHFLNPNLP----FGGVNNSG 412
|
Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD. Length = 433 |
| >gnl|CDD|233324 TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 | Back alignment and domain information |
|---|
Score = 122 bits (307), Expect = 7e-29
Identities = 107/406 (26%), Positives = 175/406 (43%), Gaps = 45/406 (11%)
Query: 206 IGGKFVDLRGSATIDVINPAT-QEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQ 264
IGG+ V G I ++P Q V ++ T E AV+AA A W P R
Sbjct: 36 IGGEEVWTSGE-RIYQVSPHNHQAVLAKATNATEELANKAVEAALDAKKEWSLLPFYDRA 94
Query: 265 RIMFKLQELI----RRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGE 320
I K +L+ R +I M + Q T+ A+ D + L + A ++ E
Sbjct: 95 AIFLKAADLLSGPYRAEILAATM---LGQSKTVYQAEIDAVAELIDFFRFNAKYARELYE 151
Query: 321 FVPNALCG-LDTYCFREPLGVCAGICPFNFPDMTPLWMFSIA-------VTCGNTFILKP 372
P + G + +R G I PFNF +IA GNT I KP
Sbjct: 152 QQPISAPGEWNRTEYRPLEGFVYAISPFNF--------TAIAGNLAGAPALMGNTVIWKP 203
Query: 373 SEKNPGTSMILAALAMEAGLPDGVLNIVHGTNDVINHIC-DDEDIKAISFVASSTASVQM 431
S+ ++ ++ + EAGLP GV+N V G +++ D D+ I F S+ +
Sbjct: 204 SDTAMLSNYLVMRILEEAGLPPGVINFVPGDGPLVSDTVLADPDLAGIHFTGSTPTFKHL 263
Query: 432 YARAAAR-GK-----RVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTA 485
+ + A + R+ GGK++ ++ P A ++ ++ + F G++C+A S
Sbjct: 264 WKQVAQNLDRYHNFPRIVGETGGKDFHVVHPSADVEHVVSGTIRGAFEYQGQKCSACSRL 323
Query: 486 VFVGSSVQWE---DELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGAS 542
+V S+ W L+ +KV D +G V+ + +I + I++A + ++
Sbjct: 324 -YVPHSL-WPRFKGRLLAELSRVKVGDPDDFGTFMGAVIDEKSFAKIVKYIEHAKSDPSA 381
Query: 543 LLLDGRNIVVPG-YEN--GNFVGPTILRDVTSNMECYKEEIFGPVL 585
L I+ G Y++ G FV PT++ KEEIFGPVL
Sbjct: 382 L-----TILAGGKYDDSVGYFVEPTVVESKDPQEPLMKEEIFGPVL 422
|
This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate [Energy metabolism, Amino acids and amines]. Length = 532 |
| >gnl|CDD|237018 PRK11905, PRK11905, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 121 bits (306), Expect = 8e-28
Identities = 117/416 (28%), Positives = 186/416 (44%), Gaps = 67/416 (16%)
Query: 215 GSATIDVINPATQE--VGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQE 272
T V+NPA + VG+ + E+ + A+ AA+ AFP W TP A R I+ + +
Sbjct: 565 DGGTRPVLNPADHDDVVGTVTEASA-EDVERALAAAQAAFPEWSATPAAERAAILERAAD 623
Query: 273 LIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATL-----QIGEFVPNALC 327
L+ + +L E G TL A EV E AV L Q +
Sbjct: 624 LMEAHMPELFALAVREAGKTLANAI------AEVRE---AVDFLRYYAAQARRLLNGPG- 673
Query: 328 GLDTYCFREPLGVCAGICPFNFPDMTPLWMF----SIAVTCGNTFILKPSEKNPGTSMIL 383
+PLG I P+NFP L +F + A+ GNT + KP+E+ P ++
Sbjct: 674 -------HKPLGPVVCISPWNFP----LAIFTGQIAAALVAGNTVLAKPAEQTP----LI 718
Query: 384 AALAM----EAGLPDGVLNIVHGTNDVI-NHICDDEDIKAISFVASSTASVQMYARA-AA 437
AA A+ EAG+P L ++ G + + D I + F S T ++ R A
Sbjct: 719 AARAVRLLHEAGVPKDALQLLPGDGRTVGAALVADPRIAGVMFTGS-TEVARLIQRTLAK 777
Query: 438 RGKR---VQSNRGGKNYAIIMPDASI---DATLNALVSAGFGAAGERCTALSTAVFVGSS 491
R + + GG+N A+I+ D+S + + SA F +AG+RC+AL + +
Sbjct: 778 RSGPPVPLIAETGGQN-AMIV-DSSALPEQVVADVIASA-FDSAGQRCSALR-VLCLQED 833
Query: 492 VQWEDELVELAK-ALK-VNVG--TDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDG 547
V D ++ + K A+ + +G S DVGPV+ E + I I+ G +
Sbjct: 834 V--ADRVLTMLKGAMDELRIGDPWRLSTDVGPVIDAEAQANIEAHIEAMRAAGRLVH--- 888
Query: 548 RNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVL--LNMQADSLEEAIKMVN 601
+ + E G FV PT++ ++ + E+FGPVL + +AD L+ I +N
Sbjct: 889 QLPLPAETEKGTFVAPTLIE--IDSISDLEREVFGPVLHVVRFKADELDRVIDDIN 942
|
Length = 1208 |
| >gnl|CDD|143453 cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins | Back alignment and domain information |
|---|
Score = 112 bits (282), Expect = 4e-26
Identities = 103/358 (28%), Positives = 153/358 (42%), Gaps = 52/358 (14%)
Query: 335 REPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPD 394
+EPLGV I P+N+P + L A+ G T +LKPSE P T+ +LA L + L
Sbjct: 106 KEPLGVVLIIGPWNYPVLLALSPLVGAIAAGCTVVLKPSELTPHTAALLAEL-VPKYLDP 164
Query: 395 GVLNIVHG----TNDVIN----HICDDEDIKAISFVASSTASVQMYARAAARG-KRVQSN 445
+V G T ++ I F S ++ A AAA+ V
Sbjct: 165 DAFQVVQGGVPETTALLEQKFDKI----------FYTGSGRVGRIIAEAAAKHLTPVTLE 214
Query: 446 RGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWEDELVE-LAKA 504
GGK+ I+ +A ++ ++ FG AG+ C A V V SV DE VE L K
Sbjct: 215 LGGKSPVIVTKNADLELAAKRILWGKFGNAGQICVAPDY-VLVDPSVY--DEFVEELKKV 271
Query: 505 LKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLD--GRNIVVPGYENG--NF 560
L A+A +R++ N LLD +V+ G + F
Sbjct: 272 LDEFYPGGANAS----------PDYTRIVNPRHFNRLKSLLDTTKGKVVIGGEMDEATRF 321
Query: 561 VGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAAR 620
+ PTI+ DV+ + EE+FGPVL ++ D L+EAIK++N IFT +
Sbjct: 322 IPPTIVSDVSWDDSLMSEELFGPVLPIIKVDDLDEAIKVINSRDTPLALYIFTDD----K 377
Query: 621 KFQNEIEARL---------VGINVPVPSS-FSSINESGEFNFCGKSGVQFYTQIKTVA 668
+ I R I+V V ++ F + +SG + GK G +T +TV
Sbjct: 378 SEIDHILTRTRSGGVVINDTLIHVGVDNAPFGGVGDSGYGAYHGKYGFDTFTHERTVV 435
|
Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD. Length = 436 |
| >gnl|CDD|240392 PTZ00381, PTZ00381, aldehyde dehydrogenase family protein; Provisional | Back alignment and domain information |
|---|
Score = 107 bits (268), Expect = 4e-24
Identities = 88/338 (26%), Positives = 138/338 (40%), Gaps = 25/338 (7%)
Query: 330 DTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAME 389
+Y EPLGV I +N+P L + A+ GNT +LKPSE +P TS ++A L +
Sbjct: 102 KSYIIPEPLGVVLVIGAWNYPLNLTLIPLAGAIAAGNTVVLKPSELSPHTSKLMAKL-LT 160
Query: 390 AGLPDGVLNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGK 449
L + ++ G +V + E I F S + AA GGK
Sbjct: 161 KYLDPSYVRVIEGGVEVTTELL-KEPFDHIFFTGSPRVGKLVMQAAAENLTPCTLELGGK 219
Query: 450 NYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWEDELV-ELAKALKVN 508
+ I+ ++ + F AG+ C A V V S++ D+ + L +A+K
Sbjct: 220 SPVIVDKSCNLKVAARRIAWGKFLNAGQTCVAPDY-VLVHRSIK--DKFIEALKEAIKEF 276
Query: 509 VGTDA--SADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYE---NGNFVGP 563
G D S D +V+ + RL A L+ D VV G E +V P
Sbjct: 277 FGEDPKKSEDYSRIVN---EFHTKRL--------AELIKDHGGKVVYGGEVDIENKYVAP 325
Query: 564 TILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQ 623
TI+ + + +EEIFGP+L + ++++E ++ +N F
Sbjct: 326 TIIVNPDLDSPLMQEEIFGPILPILTYENIDEVLEFINSRPKPLALYYFGEDKRHKELVL 385
Query: 624 NEIEARLVGINVPVPSSFSSINESGEFNFCGKSGVQFY 661
+ V IN V F +N + F G SG+ Y
Sbjct: 386 ENTSSGAVVINDCV---FHLLNPNLPFGGVGNSGMGAY 420
|
Length = 493 |
| >gnl|CDD|143454 cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldehyde dehydrogenase ywdH-like | Back alignment and domain information |
|---|
Score = 104 bits (261), Expect = 2e-23
Identities = 102/374 (27%), Positives = 162/374 (43%), Gaps = 54/374 (14%)
Query: 332 YCFREPLGVCAGICPFNFP---DMTPLWMFSI-AVTCGNTFILKPSEKNPGTSMILAALA 387
Y + EP GV I P+N+P + PL I A+ GNT +LKPSE P TS ++A +
Sbjct: 95 YIYYEPYGVVLIIAPWNYPFQLALAPL----IGAIAAGNTAVLKPSELTPNTSKVIAKI- 149
Query: 388 MEAGLPDGVLNIVHGTNDVINHICDDEDIKAISFVASSTASVQ----MYARAAARGKRVQ 443
+E + + +V G + + D + I F T SV+ + AA V
Sbjct: 150 IEETFDEEYVAVVEGGVEENQELLD-QKFDYIFF----TGSVRVGKIVMEAAAKHLTPVT 204
Query: 444 SNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWEDELV-ELA 502
GGK+ I+ DA++ +V F AG+ C A V V SV+ ++ + EL
Sbjct: 205 LELGGKSPCIVDEDANLKLAAKRIVWGKFLNAGQTCVA-PDYVLVHESVK--EKFIKELK 261
Query: 503 KALKVNVGTDA--SADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGY--ENG 558
+ +K G D S D G +++ + RL LLD IV G
Sbjct: 262 EEIKKFYGEDPLESPDYGRIIN---EKHFDRLAG---------LLDNGKIVFGGNTDRET 309
Query: 559 NFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLA 618
++ PTIL +VT + +EEIFGP+L + D+L+EAI+++ +F+
Sbjct: 310 LYIEPTILDNVTWDDPVMQEEIFGPILPVLTYDTLDEAIEIIKSRPKPLALYLFSEDKKV 369
Query: 619 ARKFQNEIE----------ARLVGINVPVPSSFSSINESGEFNFCGKSGVQFYTQIKTVA 668
+K + L +P F + SG ++ GK ++ K++
Sbjct: 370 EKKVLENLSFGGGCINDTIMHLANPYLP----FGGVGNSGMGSYHGKYSFDTFSHKKSIL 425
Query: 669 QQ--WNDLPKLGMP 680
++ W DLP P
Sbjct: 426 KKSTWFDLPLRYPP 439
|
Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD. Length = 449 |
| >gnl|CDD|236989 PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 102 bits (256), Expect = 7e-22
Identities = 120/437 (27%), Positives = 186/437 (42%), Gaps = 89/437 (20%)
Query: 206 IGGKFVDLRGSATIDVINPATQE--VGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATR 263
+ VINPA VG V T E + A+++A A P W TP A R
Sbjct: 651 LEDPVAA---GEMSPVINPADPRDIVG-YVREATPAEVEQALESAVNAAPIWFATPPAER 706
Query: 264 QRIMFKLQELIRRDIDKLAMNITV-EQGTTLKAAQRDVLFGLEVVEQACAVATL-----Q 317
I+ + +L+ + L M + V E G T A EV E AV L Q
Sbjct: 707 AAILERAADLMEAQMQTL-MGLLVREAGKTFSNAIA------EVRE---AVDFLRYYAGQ 756
Query: 318 IGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMF----SIAVTCGNTFILKPS 373
+ + N DT+ PLG I P+NFP L +F + A+ GN+ + KP+
Sbjct: 757 VRDDFDN-----DTH---RPLGPVVCISPWNFP----LAIFTGQVAAALAAGNSVLAKPA 804
Query: 374 EKNPGTSMILAALAM----EAGLPDGVLNIVHGTNDVI-NHICDDEDIKAISFVASSTAS 428
E+ P ++AA A+ EAG+P GV+ ++ G + + + D ++ + F ST
Sbjct: 805 EQTP----LIAAQAVRILLEAGVPAGVVQLLPGRGETVGAALVADARVRGVMFTG-STEV 859
Query: 429 VQMYARAAARGKRVQSN---------RGGKNYAIIMPDASIDATLNALVSAGFGAAGERC 479
++ R A R+ GG+N I+ A + + ++++ F +AG+RC
Sbjct: 860 ARLLQRNLA--GRLDPQGRPIPLIAETGGQNAMIVDSSALTEQVVADVLASAFDSAGQRC 917
Query: 480 TALSTAVFVGSSVQWEDELVELAKALK-----VNVGTDA--SADVGPVVSVEVKDQISRL 532
+AL +Q +D K L+ +G S D+GPV+ E K I R
Sbjct: 918 SALRVLC-----LQ-DDVADRTLKMLRGAMAECRMGNPDRLSTDIGPVIDAEAKANIERH 971
Query: 533 IQNAVDNGASLLLDGRNIVVPGYEN------GNFVGPTILRDVTSNMECYKEEIFGPVL- 585
IQ GR + EN G FV PT++ + + K E+FGPVL
Sbjct: 972 IQAMRA-------KGRPVFQAARENSEDWQSGTFVPPTLIE--LDSFDELKREVFGPVLH 1022
Query: 586 -LNMQADSLEEAIKMVN 601
+ + L+E I+ +N
Sbjct: 1023 VVRYNRNQLDELIEQIN 1039
|
Length = 1318 |
| >gnl|CDD|143450 cd07132, ALDH_F3AB, Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins | Back alignment and domain information |
|---|
Score = 92.7 bits (231), Expect = 1e-19
Identities = 88/321 (27%), Positives = 133/321 (41%), Gaps = 67/321 (20%)
Query: 330 DTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAME 389
D Y ++EPLGV I +N+P L A+ GN ++KPSE +P T+ +LA L
Sbjct: 93 DVYIYKEPLGVVLIIGAWNYPLQLTLVPLVGAIAAGNCVVIKPSEVSPATAKLLAEL--- 149
Query: 390 AGLP---DG-----VLNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAARGKR 441
+P D VL V T +++ D I + S++ + AA
Sbjct: 150 --IPKYLDKECYPVVLGGVEETTELLKQRFD-----YIFYTGSTSVGKIVMQAAAKHLTP 202
Query: 442 VQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTA----LSTAVFVGSSVQWEDE 497
V GGK+ + ID + F AG+ C A L T VQ ++
Sbjct: 203 VTLELGGKSPCYVDKSCDIDVAARRIAWGKFINAGQTCIAPDYVLCTP-----EVQ--EK 255
Query: 498 LVELAK-ALKVNVGTDA--SADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPG 554
VE K LK G D S D G +++ RL + LL G + + G
Sbjct: 256 FVEALKKTLKEFYGEDPKESPDYGRIINDR---HFQRLKK---------LLSGGKVAIGG 303
Query: 555 Y--ENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNR---------- 602
E ++ PT+L DV + +EEIFGP+L + ++L+EAI+ +N
Sbjct: 304 QTDEKERYIAPTVLTDVKPSDPVMQEEIFGPILPIVTVNNLDEAIEFINSREKPLALYVF 363
Query: 603 -------NRFVNGASIFTSSG 616
N+ ++ TSSG
Sbjct: 364 SNNKKVINKILSN----TSSG 380
|
NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes. Length = 443 |
| >gnl|CDD|143451 cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 91.4 bits (228), Expect = 3e-19
Identities = 85/294 (28%), Positives = 124/294 (42%), Gaps = 57/294 (19%)
Query: 336 EPLGVCAGICPFNFPDMT---PLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGL 392
+PLGV I P+N+P PL A+ GN ++KPSE P TS +LA L E
Sbjct: 100 QPLGVVGIIVPWNYPLYLALGPL---IAALAAGNRVMIKPSEFTPRTSALLAELLAEYFD 156
Query: 393 PDGVLNIVHGTNDVINHICDDEDIKAISFVA---------SSTASVQMYARAAARGKRVQ 443
D + +V G DV A +F + STA + RAAA
Sbjct: 157 ED-EVAVVTGGADV-----------AAAFSSLPFDHLLFTGSTAVGRHVMRAAAE----- 199
Query: 444 SN-------RGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWED 496
N GGK+ AII PDA + + AG+ C A V V +
Sbjct: 200 -NLTPVTLELGGKSPAIIAPDADLAKAAERIAFGKLLNAGQTCVA-PDYVLVPED--KLE 255
Query: 497 ELVELAKA--LKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPG 554
E V AKA K+ + D +++ ++ L+++A GA ++
Sbjct: 256 EFVAAAKAAVAKMYPTLADNPDYTSIINERHYARLQGLLEDARAKGA-------RVIELN 308
Query: 555 YENGNFVG-----PTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRN 603
+F PT++ +VT +M +EEIFGP+L + DSL+EAI +N
Sbjct: 309 PAGEDFAATRKLPPTLVLNVTDDMRVMQEEIFGPILPILTYDSLDEAIDYINAR 362
|
Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD. Length = 434 |
| >gnl|CDD|131331 TIGR02278, PaaN-DH, phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Score = 87.6 bits (217), Expect = 1e-17
Identities = 82/295 (27%), Positives = 128/295 (43%), Gaps = 19/295 (6%)
Query: 339 GVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGL-PDGVL 397
GV I FNFP L F+ A G + KP+ + L +E+GL P+G L
Sbjct: 146 GVAVQINAFNFPVWGLLEKFAPAFLAGVPTLAKPATPTAYVAEALVRTMVESGLLPEGSL 205
Query: 398 NIVHGT-NDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMP 456
++ G+ D+++H+ D D+ A + A++ ++ + RG R + N AI+
Sbjct: 206 QLICGSAGDLLDHL-DHRDVVAFTGSAATADRLRAHPNVLERGIRFNAEADSLNAAILGE 264
Query: 457 DAS-----IDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWEDELVELAKAL-KVNVG 510
DA+ D +V AG++CTA+ V V + E L L L KV +G
Sbjct: 265 DATPDEPEFDLFAQEIVRELTIKAGQKCTAIRR-VIVPKA-LLEAVLKALQARLAKVVLG 322
Query: 511 TDASADV--GPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILR- 567
V GP+VS+E + + + + GA + L G PG +G F PT+L
Sbjct: 323 DPREEGVDMGPLVSLEQRADVEAAVAALLAAGAEVRLGG-----PGRLDGAFFPPTLLLA 377
Query: 568 DVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKF 622
+ + E FGPV EA ++ R A++ TS AR+F
Sbjct: 378 EDPWAGAVHATEAFGPVATFFPYGDRAEAARLAARGGGSLVATLATSDPEEARQF 432
|
This enzyme is proposed to act in the ring-opening step of phenylacetic acid degradation which follows ligation of the acid with coenzyme A (by PaaF) and hydroxylation by a multicomponent non-heme iron hydroxylase complex (PaaGHIJK). Gene symbols have been standardized in. This enzyme is related to aldehyde dehydrogenases and has domains which are members of the pfam00171 and pfam01575 families. This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species. Length = 663 |
| >gnl|CDD|143395 cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehydrogenase superfamily | Back alignment and domain information |
|---|
Score = 84.2 bits (209), Expect = 4e-17
Identities = 37/109 (33%), Positives = 52/109 (47%), Gaps = 5/109 (4%)
Query: 564 TILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQ 623
T+L DV +M +EEIFGPVL ++ EEAI + N + A +FT A +
Sbjct: 257 TVLVDVDPDMPIAQEEIFGPVLPVIRFKDEEEAIALANDTEYGLTAGVFTRDLNRALRVA 316
Query: 624 NEIEARLVGIN-----VPVPSSFSSINESGEFNFCGKSGVQFYTQIKTV 667
+ A V IN V + F + SG G G++ YT+ KTV
Sbjct: 317 ERLRAGTVYINDSSIGVGPEAPFGGVKNSGIGREGGPYGLEEYTRTKTV 365
|
The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-L) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. The ALDH-like group is represented by such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 367 |
| >gnl|CDD|143446 cd07128, ALDH_MaoC-N, N-terminal domain of the monoamine oxidase C dehydratase | Back alignment and domain information |
|---|
Score = 85.0 bits (211), Expect = 5e-17
Identities = 94/310 (30%), Positives = 140/310 (45%), Gaps = 41/310 (13%)
Query: 339 GVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAM-----EAG-L 392
GV I FNFP L F+ A+ G I+KP+ T+ A+ E+G L
Sbjct: 146 GVAVHINAFNFPVWGMLEKFAPALLAGVPVIVKPA-----TATAYLTEAVVKDIVESGLL 200
Query: 393 PDGVLNIVHG-TNDVINHICDDEDIKAISFVASSTASVQMYARAA--ARGKRVQSNRGGK 449
P+G L ++ G D+++H+ ++D+ ++F S+ + ++ A AR R +
Sbjct: 201 PEGALQLICGSVGDLLDHL-GEQDV--VAFTGSAATAAKLRAHPNIVARSIRFNAEADSL 257
Query: 450 NYAIIMPDASIDATLNALVSAGFGA-----AGERCTALSTAVFVGSSVQWEDELVELAKA 504
N AI+ PDA+ L AG++CTA+ A FV + D ++E KA
Sbjct: 258 NAAILGPDATPGTPEFDLFVKEVAREMTVKAGQKCTAIRRA-FVPEAR--VDAVIEALKA 314
Query: 505 L--KVNVGTDASADV--GPVVSVE----VKDQISRLIQNA--VDNGASLLLDGRNIVVPG 554
KV VG V GP+VS E V+ ++ L+ A V G D +V
Sbjct: 315 RLAKVVVGDPRLEGVRMGPLVSREQREDVRAAVATLLAEAEVVFGGP----DRFEVVGAD 370
Query: 555 YENGNFVGPTILR--DVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIF 612
E G F PT+L D + + E FGPV M DSL EAI++ R R AS+
Sbjct: 371 AEKGAFFPPTLLLCDDPDAATAVHDVEAFGPVATLMPYDSLAEAIELAARGRGSLVASVV 430
Query: 613 TSSGLAARKF 622
T+ AR+
Sbjct: 431 TNDPAFAREL 440
|
The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH. Length = 513 |
| >gnl|CDD|143403 cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like | Back alignment and domain information |
|---|
Score = 81.9 bits (202), Expect = 4e-16
Identities = 77/364 (21%), Positives = 135/364 (37%), Gaps = 44/364 (12%)
Query: 244 AVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFG 303
A+ AA + A + + R + ++ + + +A + G A
Sbjct: 4 ALLAADISTKAARRLALPKRADFLARIIQRLAAKSYDIAAGAVLVTGKGWMFA------- 56
Query: 304 LEVVEQACA-VATLQIGEFVPNALC-------------GLDTYCFREPLGVCAGICPFNF 349
E C L+ FV + ++ +R P G I FNF
Sbjct: 57 ----ENICGDQVQLRARAFVIYSYRIPHEPGNHLGQGLKQQSHGYRWPYGPVLVIGAFNF 112
Query: 350 PDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAG-LPDGVLNIVHGTNDVIN 408
P PL + A+ GN I+KP I+ L AG LP + +++G +
Sbjct: 113 PLWIPLLQLAGALAMGNPVIVKPHTAVSIVMQIMVRLLHYAGLLPPEDVTLINGDGKTMQ 172
Query: 409 HICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMPDA-SIDATLNAL 467
+ + K + F SS + ++ A+ R+ G N+ ++ PDA ++D
Sbjct: 173 ALLLHPNPKMVLFTGSSRVAEKL--ALDAKQARIYLELAGFNWKVLGPDAQAVDYVAWQC 230
Query: 468 VSAGFGAAGERCTALSTAVFVGSSVQWEDELVELAKALKVNVGTDASADVGPVVSVEVKD 527
V +G++CTA S +FV + LVE KAL + +GPV +
Sbjct: 231 VQDMTACSGQKCTAQS-MLFVPENWSKT-PLVEKLKAL-LARRKLEDLLLGPVQT---FT 284
Query: 528 QISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTI-------LRDVTSNMECYKEEI 580
++ + G+ LL G+ + + + G + + ++ E EEI
Sbjct: 285 TLAMIAHMENLLGSVLLFSGK--ELKNHSIPSIYGACVASALFVPIDEILKTYELVTEEI 342
Query: 581 FGPV 584
FGP
Sbjct: 343 FGPF 346
|
ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway. Length = 442 |
| >gnl|CDD|143455 cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins | Back alignment and domain information |
|---|
Score = 77.5 bits (191), Expect = 1e-14
Identities = 91/352 (25%), Positives = 141/352 (40%), Gaps = 37/352 (10%)
Query: 334 FREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLP 393
EPLGV I +NFP + L A+ GN +LKPSE P TS +LA L + L
Sbjct: 98 VSEPLGVVLVISAWNFPFLLSLEPVIGAIAAGNAVVLKPSELAPATSALLAKL-IPEYLD 156
Query: 394 DGVLNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAI 453
+ ++ G + + + K I F S + A AA V GGK I
Sbjct: 157 TKAIKVIEGGVPETTALLEQKWDK-IFFTGSPRVGRIIMAAAAKHLTPVTLELGGKCPVI 215
Query: 454 IMPDASIDATLNALVSAGFGA-AGERCTA----LSTAVFVGSSVQWEDELVE-LAKALKV 507
+ + + + +G G+ C A L F L++ L L+
Sbjct: 216 VDSTVDLKVAVRRIAGGKWGCNNGQACIAPDYVLVEESFA-------PTLIDALKNTLEK 268
Query: 508 NVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNI---VVPG---YENGNFV 561
G + E KD +SR++ + S LLD ++ +V G E ++
Sbjct: 269 FFGENP---------KESKD-LSRIVNSHHFQRLSRLLDDPSVADKIVHGGERDEKNLYI 318
Query: 562 GPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARK 621
PTIL D + EEIFGP+L + +EE+I+++N A +FT + R+
Sbjct: 319 EPTILLDPPLDSSIMTEEIFGPLLPIITVKKIEESIEIINSRPKPLAAYVFTKNKELKRR 378
Query: 622 FQNEIEARLVGIN-----VPVPS-SFSSINESGEFNFCGKSGVQFYTQIKTV 667
E + V N + + F + ESG + GK ++ K V
Sbjct: 379 IVAETSSGGVTFNDTVVQYAIDTLPFGGVGESGFGAYHGKFSFDAFSHKKAV 430
|
Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress. Length = 432 |
| >gnl|CDD|177831 PLN02174, PLN02174, aldehyde dehydrogenase family 3 member H1 | Back alignment and domain information |
|---|
Score = 76.6 bits (188), Expect = 2e-14
Identities = 87/346 (25%), Positives = 158/346 (45%), Gaps = 29/346 (8%)
Query: 336 EPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDG 395
EPLGV I +N+P + + A++ GN +LKPSE P +S +LA L +E L
Sbjct: 111 EPLGVVLVISAWNYPFLLSIDPVIGAISAGNAVVLKPSELAPASSALLAKL-LEQYLDSS 169
Query: 396 VLNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIM 455
+ +V G + + + K I + SS + A AA V GGK+ ++
Sbjct: 170 AVRVVEGAVTETTALLEQKWDK-IFYTGSSKIGRVIMAAAAKHLTPVVLELGGKSPVVVD 228
Query: 456 PDASIDATLNALVSAGFGAA-GERCTALSTAVFVGSSVQWEDELVE-LAKALKVNVGTDA 513
D + T+ +++ +G G+ C + ++ ++ ++ ++++ + K L+ G +
Sbjct: 229 SDTDLKVTVRRIIAGKWGCNNGQACISPD---YILTTKEYAPKVIDAMKKELETFYGKN- 284
Query: 514 SADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNI---VVPGYENGN---FVGPTILR 567
+E KD +SR++ + + S LLD + + +V G E + PTIL
Sbjct: 285 --------PMESKD-MSRIVNSTHFDRLSKLLDEKEVSDKIVYGGEKDRENLKIAPTILL 335
Query: 568 DVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIE 627
DV + EEIFGP+L + ++LEE+ ++ A +FT + +F +
Sbjct: 336 DVPLDSLIMSEEIFGPLLPILTLNNLEESFDVIRSRPKPLAAYLFTHNKKLKERFAATVS 395
Query: 628 ARLVGIN-VPVPSS-----FSSINESGEFNFCGKSGVQFYTQIKTV 667
A + +N + V + F + ESG + GK ++ K V
Sbjct: 396 AGGIVVNDIAVHLALHTLPFGGVGESGMGAYHGKFSFDAFSHKKAV 441
|
Length = 484 |
| >gnl|CDD|237016 PRK11903, PRK11903, aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 73.6 bits (181), Expect = 2e-13
Identities = 79/311 (25%), Positives = 133/311 (42%), Gaps = 36/311 (11%)
Query: 339 GVCAGICPFNFPDMTPLW-MFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAG-LPDGV 396
GV I FNFP LW + A+ G I+KP+ + + + AG LP G
Sbjct: 150 GVALFINAFNFPAWG-LWEKAAPALLAGVPVIVKPATATAWLTQRMVKDVVAAGILPAGA 208
Query: 397 LNIVHGTN-DVINHI--CDDEDIKAISFVASS-TASV-QMYARAAARGKRVQSNRGGKNY 451
L++V G++ +++H+ D +SF S+ TA+V + + R RV N
Sbjct: 209 LSVVCGSSAGLLDHLQPFD-----VVSFTGSAETAAVLRSHPAVVQRSVRVNVEADSLNS 263
Query: 452 AIIMPDA-----SIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWEDELVELAKAL- 505
A++ PDA + D + +V +G++CTA+ +FV ++ ++ LA L
Sbjct: 264 ALLGPDAAPGSEAFDLFVKEVVREMTVKSGQKCTAIRR-IFVPEAL-YDAVAEALAARLA 321
Query: 506 KVNVGTDASADV--GPVVSVE----VKDQISRLIQNAVDNGASLLLDGRNIVVPGYEN-- 557
K VG + V GP+VS V+ ++ L A +L DG + +
Sbjct: 322 KTTVGNPRNDGVRMGPLVSRAQLAAVRAGLAALRA-----QAEVLFDGGGFALVDADPAV 376
Query: 558 GNFVGPTIL--RDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSS 615
VGPT+L D + + E+FGPV + A+ + R + AS+++
Sbjct: 377 AACVGPTLLGASDPDAATAVHDVEVFGPVATLLPYRDAAHALALARRGQGSLVASVYSDD 436
Query: 616 GLAARKFQNEI 626
E+
Sbjct: 437 AAFLAAAALEL 447
|
Length = 521 |
| >gnl|CDD|236931 PRK11563, PRK11563, bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 73.0 bits (180), Expect = 5e-13
Identities = 88/308 (28%), Positives = 140/308 (45%), Gaps = 37/308 (12%)
Query: 339 GVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAAL--AM-EAG-LPD 394
GV I FNFP L + A G I+KP+ T+ + A+ + E+G LP+
Sbjct: 150 GVAVHINAFNFPVWGMLEKLAPAFLAGVPAIVKPA---TATAYLTEAVVRLIVESGLLPE 206
Query: 395 GVLNIVHG-TNDVINHICDDEDIKAISFVAS-STA-SVQMYARAAARGKRVQSNRGGKNY 451
G L ++ G D+++H+ D +D ++F S +TA ++ + A + N
Sbjct: 207 GALQLICGSAGDLLDHL-DGQD--VVTFTGSAATAQKLRAHPNVVANSVPFTAEADSLNA 263
Query: 452 AIIMPDAS-----IDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWEDELVE-LAKAL 505
AI+ PDA+ D + +V AG++CTA+ A V + D ++E L L
Sbjct: 264 AILGPDATPGTPEFDLFVKEVVREMTVKAGQKCTAIRRA-IVPRA--LVDAVIEALRARL 320
Query: 506 -KVNVGTDASADV--GPVVSV----EVKDQISRLIQNA--VDNGASLLLDGRNIVVPGYE 556
KV VG V G + S+ +V+++++ L+ A V G D +V E
Sbjct: 321 AKVVVGDPRLEGVRMGALASLEQREDVREKVAALLAAAEIVFGG----PDSFEVVGADAE 376
Query: 557 NGNFVGPTILR--DVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTS 614
G F PT+L D + E FGPV M D L+EAI++ R + AS+ T+
Sbjct: 377 KGAFFPPTLLYCDDPLEAPAVHDVEAFGPVSTLMPYDDLDEAIELAARGKGSLVASLVTA 436
Query: 615 SGLAARKF 622
AR+
Sbjct: 437 DPEVAREL 444
|
Length = 675 |
| >gnl|CDD|165847 PLN02203, PLN02203, aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 63.2 bits (154), Expect = 4e-10
Identities = 76/275 (27%), Positives = 116/275 (42%), Gaps = 22/275 (8%)
Query: 336 EPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDG 395
EPLGV +NFP L A+ GN +LKPSE P TS LAA + L
Sbjct: 107 EPLGVVLIFSSWNFPIGLSLEPLIGAIAAGNAVVLKPSELAPATSAFLAA-NIPKYLDSK 165
Query: 396 VLNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIM 455
+ ++ G V + + K I F S + AA V GGK I+
Sbjct: 166 AVKVIEGGPAVGEQLLQHKWDK-IFFTGSPRVGRIIMTAAAKHLTPVALELGGKCPCIVD 224
Query: 456 PDAS---IDATLNALVSAGFGA-AGERCTALSTAVFVGSSVQWEDELVELAKALKVNVGT 511
+S +N +V +G+ AG+ C A+ +V ++ L+EL K+
Sbjct: 225 SLSSSRDTKVAVNRIVGGKWGSCAGQACIAID---YVLVEERFAPILIELLKSTIKKFFG 281
Query: 512 DASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGR---NIVVPGY--ENGNFVGPTIL 566
+ + + + K RL ++LL D R +IV G E F+ PTIL
Sbjct: 282 ENPRESKSMARILNKKHFQRL--------SNLLKDPRVAASIVHGGSIDEKKLFIEPTIL 333
Query: 567 RDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVN 601
+ + + EEIFGP+L + +E++I +N
Sbjct: 334 LNPPLDSDIMTEEIFGPLLPIITVKKIEDSIAFIN 368
|
Length = 484 |
| >gnl|CDD|143447 cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdehyde Dehydrogenase | Back alignment and domain information |
|---|
Score = 60.6 bits (148), Expect = 2e-09
Identities = 90/398 (22%), Positives = 139/398 (34%), Gaps = 67/398 (16%)
Query: 244 AVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDV--- 300
A AA AF +++ A R + + + I D+L T L A+
Sbjct: 4 AAAAAAAAFESYRALSPARRAAFLEAIADEIEALGDELVA--RAHAETGLPEARLQGELG 61
Query: 301 -------LFGLEVVEQACAVATL--QIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPD 351
LF V E + A + + P L D PLG A NFP
Sbjct: 62 RTTGQLRLFADLVREGSWLDARIDPADPDRQP--LPRPDLRRMLVPLGPVAVFGASNFP- 118
Query: 352 MTPLWMFSI-------AVTCGNTFILKPSEKNPGTSMILAALAMEA----GLPDGVLNIV 400
FS+ A+ G ++K +PGTS ++A A GLP GV +++
Sbjct: 119 ----LAFSVAGGDTASALAAGCPVVVKAHPAHPGTSELVARAIRAALRATGLPAGVFSLL 174
Query: 401 HGTNDVINH-ICDDEDIKAISFVASSTASVQMYARAAAR--GKRVQSNRGGKNYAIIMPD 457
G + + IKA+ F S ++ AAAR + G N I+P
Sbjct: 175 QGGGREVGVALVKHPAIKAVGFTGSRRGGRALFDAAAARPEPIPFYAELGSVNPVFILPG 234
Query: 458 A------SIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWEDELVE-LAKALKVNVG 510
A +I ++ G AG+ CT + D + LA+AL
Sbjct: 235 ALAERGEAIAQGFVGSLTLG---AGQFCTNPGLVLVPAGPAG--DAFIAALAEALA---- 285
Query: 511 TDASADV--GPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTIL-- 566
A A P ++ + + L G +L G E GN PT+
Sbjct: 286 -AAPAQTMLTPGIAEAYRQGVEALAAAP---GVRVLAGG-----AAAEGGNQAAPTLFKV 336
Query: 567 --RDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNR 602
++ +EE+FGP L ++ D E + +
Sbjct: 337 DAAAFLAD-PALQEEVFGPASLVVRYDDAAELLAVAEA 373
|
Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids. Length = 454 |
| >gnl|CDD|143444 cd07126, ALDH_F12_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12 | Back alignment and domain information |
|---|
Score = 58.7 bits (142), Expect = 1e-08
Identities = 86/411 (20%), Positives = 157/411 (38%), Gaps = 52/411 (12%)
Query: 204 NFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATR 263
N + GK+ T+ ++P + VP T +E + VD+ ++ + + P+
Sbjct: 1 NLVAGKWKGASNYTTL--LDPLNGDKFISVPDTDEDEINEFVDSLRQCPKSGLHNPLKNP 58
Query: 264 QR------IMFKLQELIR---------RDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVE 308
+R + ++ +R R I ++A + + ++ +E
Sbjct: 59 ERYLLYGDVSHRVAHELRKPEVEDFFARLIQRVAPKSDAQALGEVVVTRK-------FLE 111
Query: 309 QACA--VATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGN 366
V L VP G + +R P G A I PFNFP P A+ GN
Sbjct: 112 NFAGDQVRFLARSFNVPGDHQGQQSSGYRWPYGPVAIITPFNFPLEIPALQLMGALFMGN 171
Query: 367 TFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGTNDVINHICDDEDIKAISFVASST 426
+LK K L G+P ++++H +N I + + + F SS
Sbjct: 172 KPLLKVDSKVSVVMEQFLRLLHLCGMPATDVDLIHSDGPTMNKILLEANPRMTLFTGSSK 231
Query: 427 ASVQMYARAAARGKRVQSNRGGKNYAIIMPDAS-IDATLNALVSAGFGAAGERCTALSTA 485
+ ++ A +V+ G ++ I+ PD S +D + +G++C+A S
Sbjct: 232 VAERL---ALELHGKVKLEDAGFDWKILGPDVSDVDYVAWQCDQDAYACSGQKCSAQSI- 287
Query: 486 VFVGSS---VQWEDELVELAKALKVNVGTDASADVGPVVSVE---VKDQISRLIQNAVDN 539
+F + D+L LA+ K+ T +GPV++ + D + +L+
Sbjct: 288 LFAHENWVQAGILDKLKALAEQRKLEDLT-----IGPVLTWTTERILDHVDKLLAIP--- 339
Query: 540 GASLLLDGRNI-------VVPGYENGNFVGPTILRDVTSNMECYKEEIFGP 583
GA +L G+ + + YE P + N E E+FGP
Sbjct: 340 GAKVLFGGKPLTNHSIPSIYGAYEPTAVFVPLEEIAIEENFELVTTEVFGP 390
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences. Length = 489 |
| >gnl|CDD|143445 cd07127, ALDH_PAD-PaaZ, Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like | Back alignment and domain information |
|---|
Score = 52.9 bits (127), Expect = 7e-07
Identities = 92/434 (21%), Positives = 157/434 (36%), Gaps = 76/434 (17%)
Query: 222 INPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKL 281
++P E+G P + + AA+ A P W++ R R L+ L R +
Sbjct: 70 VSPYGVELGVTYPQCDPDAL---LAAARAAMPGWRD--AGARARAGVCLEILQRLNARSF 124
Query: 282 AMNITVE-----------QGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVPNALCGLD 330
M V Q A R GLE V A + +P
Sbjct: 125 EMAHAVMHTTGQAFMMAFQAGGPHAQDR----GLEAVAYAWREMS-----RIPPTAEWEK 175
Query: 331 TYCFREPL-----------GVCAGICPFNFPDMTPLW-----MFSIAVTCGNTFILKPSE 374
+PL GV I FP W +F+ T GN I+KP
Sbjct: 176 PQGKHDPLAMEKTFTVVPRGVALVIGCSTFPT----WNGYPGLFASLAT-GNPVIVKP-- 228
Query: 375 KNPGTSMILA-------ALAMEAGL-PDGVLNIVHGTND-VINHICDDEDIKAISFVASS 425
+P + LA + EAG P+ V + + + +++ I F S+
Sbjct: 229 -HPAAILPLAITVQVAREVLAEAGFDPNLVTLAADTPEEPIAQTLATRPEVRIIDFTGSN 287
Query: 426 TASVQMYARAAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTA 485
+ + A AR +V + + G N ++ + A L L + +G+ CT
Sbjct: 288 --AFGDWLEANARQAQVYTEKAGVNTVVVDSTDDLKAMLRNLAFSLSLYSGQMCTT-PQN 344
Query: 486 VFV-GSSVQWEDELV-------ELAKALKVNVGTDASAD--VGPVVSVEVKDQISRLIQN 535
++V +Q +D +LA A+ + A A +G + S + +I+ Q
Sbjct: 345 IYVPRDGIQTDDGRKSFDEVAADLAAAIDGLLADPARAAALLGAIQSPDTLARIAEARQ- 403
Query: 536 AVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEE 595
+LL + P + + P +L+ S+ Y EE FGP+ + DS +
Sbjct: 404 ----LGEVLLASEAVAHPEFPDARVRTPLLLKLDASDEAAYAEERFGPIAFVVATDSTDH 459
Query: 596 AIKMVNRNRFVNGA 609
+I++ + +GA
Sbjct: 460 SIELARESVREHGA 473
|
Phenylacetic acid degradation (PAD) proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system. This CD is limited to bacterial monofunctional enzymes. Length = 549 |
| >gnl|CDD|143396 cd07077, ALDH-like, NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family | Back alignment and domain information |
|---|
Score = 49.1 bits (117), Expect = 7e-06
Identities = 48/280 (17%), Positives = 82/280 (29%), Gaps = 36/280 (12%)
Query: 220 DVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATR----QRIMFKLQELIR 275
+ A + + +A + V+ R + ++ ++
Sbjct: 1 ESAKNAQRTLAVNHDEQRDLIINAIANALYDTRQRLASEAVSERGAYIRSLIANWIAMMG 60
Query: 276 RDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFR 335
KL NI E+G T V V GE TY
Sbjct: 61 CSESKLYKNIDTERGIT------------ASVGHIQDVLLPDNGE----------TYVRA 98
Query: 336 EPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEA----G 391
P+GV I P ++ + + N I +P P T+ LA L A G
Sbjct: 99 FPIGVTMHILPST-NPLSGITSALRGIATRNQCIFRPHPSAPFTNRALALLFQAADAAHG 157
Query: 392 LPDGVLNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNY 451
VL + H ++++ + I I VA+ A + V G +
Sbjct: 158 PKILVLYVPHPSDELAEELLSHPKIDLI--VATGGRDAVDAAVKHSPHIPVIGFGAGNSP 215
Query: 452 AIIMPDASID-ATLNALVSAGFGAAGERCTALSTAVFVGS 490
++ A + A+ + S F C + V
Sbjct: 216 VVVDETADEERASGSVHDSKFFDQNA--CASEQNLYVVDD 253
|
The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 397 |
| >gnl|CDD|217369 pfam03101, FAR1, FAR1 DNA-binding domain | Back alignment and domain information |
|---|
Score = 40.8 bits (96), Expect = 2e-04
Identities = 26/81 (32%), Positives = 36/81 (44%), Gaps = 13/81 (16%)
Query: 32 GYVVTIKKSRKDR------RVILGCDRGGVYRNRRKIDENKRKRKACSRLINCPFEA--- 82
G+ V KSR+ R R C + G +R RK KR+ +A +R C A
Sbjct: 11 GFSVRKSKSRRSRRDGEIIRRRFVCSKEG-FRKERKKSVRKRRPRASTR-TGCK--AMMV 66
Query: 83 IGKKEDDVWVLTIKNGEHNHE 103
+ + D WV+T EHNH
Sbjct: 67 VKLRSDGKWVVTKFVLEHNHP 87
|
This domain contains a WRKY like fold and is therefore most likely a zinc binding DNA-binding domain. Length = 90 |
| >gnl|CDD|131341 TIGR02288, PaaN_2, phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Score = 42.9 bits (101), Expect = 9e-04
Identities = 55/267 (20%), Positives = 102/267 (38%), Gaps = 28/267 (10%)
Query: 361 AVTCGNTFILKPSEKNPGTSMILA-------ALAMEAGL-PDGVLNIVH-GTNDVINHIC 411
++ GN ++KP +PG + LA + EAG P+ V ++ +
Sbjct: 217 SLATGNPVLVKP---HPGAILPLALTVQVAREVLGEAGFDPNLVTLAAFDPGHEAAQRLA 273
Query: 412 DDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAG 471
D ++ I F S+ + + AR +V + + G N II A L L +
Sbjct: 274 TDPAVRIIDFTGSN--AFGQWLEQNARQAQVYTEKAGVNTVIIESTDDYKAMLRNLAFSL 331
Query: 472 FGAAGERCTALSTAVFVGSSVQWEDELV-------ELAKALKVNVGTDASAD--VGPVVS 522
+G+ CT + ++ + +LA A+ +G A A +G + S
Sbjct: 332 SLYSGQMCTTTQAILVPRDGIRTDQGRKSYDEVAADLATAIDGLLGDPARATAVLGAIQS 391
Query: 523 VEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFG 582
+ +I+ +LL I P + P +L+ ++ Y +E FG
Sbjct: 392 PDTLARIAEARALG-----EVLLASTKIEHPEFPGARVRTPLLLKCDAADEAAYMQERFG 446
Query: 583 PVLLNMQADSLEEAIKMVNRNRFVNGA 609
P+ + D A+++ R+ GA
Sbjct: 447 PIAFVVAVDDGAHAVELARRSVREKGA 473
|
This enzyme is proposed to act in the ring-opening step of phenylacetic acid degradation which follows ligation of the acid with coenzyme A (by PaaF) and hydroxylation by a multicomponent non-heme iron hydroxylase complex (PaaGHIJK). Gene symbols have been standardized in. This enzyme is related to aldehyde dehydrogenases and has a domain which is a member of the pfam00171 family. This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278. Length = 551 |
| >gnl|CDD|149707 pfam08731, AFT, Transcription factor AFT | Back alignment and domain information |
|---|
Score = 39.0 bits (91), Expect = 0.001
Identities = 24/93 (25%), Positives = 44/93 (47%), Gaps = 7/93 (7%)
Query: 14 FQDREDLIKHVRDFGTNQGYVVTIKKSRKDRRVILGCDRGGVYRNRRKIDENKRKRKAC- 72
F+D++D+ ++ QG + I++S + ++ C + +RK E+ RK+K
Sbjct: 1 FKDKDDIKPWLQKIFYPQGIEIVIERSDSSK-IVFKCKAS---KRKRKESEDLRKKKRAS 56
Query: 73 SRLINCPFE--AIGKKEDDVWVLTIKNGEHNHE 103
SR +CPF A W + + N H+H
Sbjct: 57 SRYNSCPFRVRATYSLRRKKWTIVVMNNNHSHP 89
|
AFT (activator of iron transcription) is an iron regulated transcriptional activator that regulates the expression of genes involved in iron homeostasis. This family includes the paralogous pair of transcription factors AFT1 and AFT2. Length = 90 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1035 | |||
| PLN02419 | 604 | methylmalonate-semialdehyde dehydrogenase [acylati | 100.0 | |
| KOG2451 | 503 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| KOG2450 | 501 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| PRK11241 | 482 | gabD succinate-semialdehyde dehydrogenase I; Provi | 100.0 | |
| COG1012 | 472 | PutA NAD-dependent aldehyde dehydrogenases [Energy | 100.0 | |
| PLN02766 | 501 | coniferyl-aldehyde dehydrogenase | 100.0 | |
| PLN02278 | 498 | succinic semialdehyde dehydrogenase | 100.0 | |
| PRK13252 | 488 | betaine aldehyde dehydrogenase; Provisional | 100.0 | |
| cd07085 | 478 | ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrog | 100.0 | |
| TIGR03374 | 472 | ABALDH 1-pyrroline dehydrogenase. Members of this | 100.0 | |
| cd07113 | 477 | ALDH_PADH_NahF Escherichia coli NAD+-dependent phe | 100.0 | |
| PLN02466 | 538 | aldehyde dehydrogenase family 2 member | 100.0 | |
| cd07140 | 486 | ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydroge | 100.0 | |
| PLN02315 | 508 | aldehyde dehydrogenase family 7 member | 100.0 | |
| cd07117 | 475 | ALDH_StaphAldA1 Uncharacterized Staphylococcus aur | 100.0 | |
| cd07559 | 480 | ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dep | 100.0 | |
| PLN02467 | 503 | betaine aldehyde dehydrogenase | 100.0 | |
| cd07142 | 476 | ALDH_F2BC Arabidosis aldehyde dehydrogenase family | 100.0 | |
| TIGR02299 | 488 | HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyd | 100.0 | |
| TIGR03216 | 481 | OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehy | 100.0 | |
| cd07086 | 478 | ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadip | 100.0 | |
| PRK13473 | 475 | gamma-aminobutyraldehyde dehydrogenase; Provisiona | 100.0 | |
| cd07097 | 473 | ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent | 100.0 | |
| cd07111 | 480 | ALDH_F16 Aldehyde dehydrogenase family 16A1-like. | 100.0 | |
| cd07116 | 479 | ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependen | 100.0 | |
| cd07130 | 474 | ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic se | 100.0 | |
| cd07141 | 481 | ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydro | 100.0 | |
| cd07119 | 482 | ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent be | 100.0 | |
| cd07144 | 484 | ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyd | 100.0 | |
| TIGR01722 | 477 | MMSDH methylmalonic acid semialdehyde dehydrogenas | 100.0 | |
| cd07131 | 478 | ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuen | 100.0 | |
| PRK13968 | 462 | putative succinate semialdehyde dehydrogenase; Pro | 100.0 | |
| cd07143 | 481 | ALDH_AldA_AN0554 Aspergillus nidulans aldehyde deh | 100.0 | |
| TIGR01804 | 467 | BADH glycine betaine aldehyde dehydrogenase. Betai | 100.0 | |
| cd07091 | 476 | ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families | 100.0 | |
| cd07124 | 512 | ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxyl | 100.0 | |
| PRK09406 | 457 | gabD1 succinic semialdehyde dehydrogenase; Reviewe | 100.0 | |
| TIGR01237 | 511 | D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| cd07088 | 468 | ALDH_LactADH-AldA Escherichia coli lactaldehyde de | 100.0 | |
| cd07151 | 465 | ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyd | 100.0 | |
| TIGR01236 | 533 | D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| cd07139 | 471 | ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehy | 100.0 | |
| PRK09847 | 494 | gamma-glutamyl-gamma-aminobutyraldehyde dehydrogen | 100.0 | |
| cd07138 | 466 | ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric ac | 100.0 | |
| PRK09457 | 487 | astD succinylglutamic semialdehyde dehydrogenase; | 100.0 | |
| PRK03137 | 514 | 1-pyrroline-5-carboxylate dehydrogenase; Provision | 100.0 | |
| TIGR01780 | 448 | SSADH succinate-semialdehyde dehydrogenase. SSADH | 100.0 | |
| cd07123 | 522 | ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate | 100.0 | |
| PLN02174 | 484 | aldehyde dehydrogenase family 3 member H1 | 100.0 | |
| cd07107 | 456 | ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde | 100.0 | |
| PLN00412 | 496 | NADP-dependent glyceraldehyde-3-phosphate dehydrog | 100.0 | |
| cd07083 | 500 | ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)- | 100.0 | |
| TIGR03250 | 472 | PhnAcAld_DH putative phosphonoacetaldehyde dehydro | 100.0 | |
| cd07145 | 456 | ALDH_LactADH_F420-Bios Methanocaldococcus jannasch | 100.0 | |
| cd07090 | 457 | ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobuty | 100.0 | |
| cd07110 | 456 | ALDH_F10_BADH Arabidopsis betaine aldehyde dehydro | 100.0 | |
| TIGR03240 | 484 | arg_catab_astD succinylglutamic semialdehyde dehyd | 100.0 | |
| cd07120 | 455 | ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde deh | 100.0 | |
| cd07148 | 455 | ALDH_RL0313 Uncharacterized ALDH ( RL0313) with si | 100.0 | |
| cd07109 | 454 | ALDH_AAS00426 Uncharacterized Saccharopolyspora sp | 100.0 | |
| cd07150 | 451 | ALDH_VaniDH_like Pseudomonas putida vanillin dehyd | 100.0 | |
| cd07128 | 513 | ALDH_MaoC-N N-terminal domain of the monoamine oxi | 100.0 | |
| cd07118 | 454 | ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydr | 100.0 | |
| cd07115 | 453 | ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxy | 100.0 | |
| cd07106 | 446 | ALDH_AldA-AAD23400 Streptomyces aureofaciens putat | 100.0 | |
| PRK09407 | 524 | gabD2 succinic semialdehyde dehydrogenase; Reviewe | 100.0 | |
| PF00171 | 462 | Aldedh: Aldehyde dehydrogenase family; InterPro: I | 100.0 | |
| cd07102 | 452 | ALDH_EDX86601 Uncharacterized aldehyde dehydrogena | 100.0 | |
| cd07112 | 462 | ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent | 100.0 | |
| cd07125 | 518 | ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate d | 100.0 | |
| cd07089 | 459 | ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric | 100.0 | |
| cd07094 | 453 | ALDH_F21_LactADH-like ALDH subfamily: NAD+-depende | 100.0 | |
| cd07101 | 454 | ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succi | 100.0 | |
| cd07147 | 452 | ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1 | 100.0 | |
| cd07082 | 473 | ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylat | 100.0 | |
| cd07108 | 457 | ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent a | 100.0 | |
| cd07114 | 457 | ALDH_DhaS Uncharacterized Candidatus pelagibacter | 100.0 | |
| cd07099 | 453 | ALDH_DDALDH Methylomonas sp. 4,4'-diapolycopene-di | 100.0 | |
| TIGR02278 | 663 | PaaN-DH phenylacetic acid degradation protein paaN | 100.0 | |
| TIGR01238 | 500 | D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| cd07092 | 450 | ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent g | 100.0 | |
| cd07152 | 443 | ALDH_BenzADH NAD-dependent benzaldehyde dehydrogen | 100.0 | |
| PRK11903 | 521 | aldehyde dehydrogenase; Provisional | 100.0 | |
| cd07103 | 451 | ALDH_F5_SSADH_GabD Mitochondrial succinate-semiald | 100.0 | |
| cd07098 | 465 | ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and | 100.0 | |
| PRK11563 | 675 | bifunctional aldehyde dehydrogenase/enoyl-CoA hydr | 100.0 | |
| KOG2456 | 477 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| cd07093 | 455 | ALDH_F8_HMSADH Human aldehyde dehydrogenase family | 100.0 | |
| PTZ00381 | 493 | aldehyde dehydrogenase family protein; Provisional | 100.0 | |
| cd07100 | 429 | ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succi | 100.0 | |
| cd07149 | 453 | ALDH_y4uC Uncharacterized ALDH (y4uC) with similar | 100.0 | |
| cd07146 | 451 | ALDH_PhpJ Streptomyces putative phosphonoformaldeh | 100.0 | |
| PLN02203 | 484 | aldehyde dehydrogenase | 100.0 | |
| cd07095 | 431 | ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde | 100.0 | |
| cd07105 | 432 | ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-l | 100.0 | |
| cd07104 | 431 | ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependen | 100.0 | |
| cd07126 | 489 | ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate de | 100.0 | |
| PRK11904 | 1038 | bifunctional proline dehydrogenase/pyrroline-5-car | 100.0 | |
| cd07135 | 436 | ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde | 100.0 | |
| PRK10090 | 409 | aldehyde dehydrogenase A; Provisional | 100.0 | |
| cd07136 | 449 | ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydr | 100.0 | |
| cd07137 | 432 | ALDH_F3FHI Plant aldehyde dehydrogenase family 3 m | 100.0 | |
| cd07133 | 434 | ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-l | 100.0 | |
| KOG2454 | 583 | consensus Betaine aldehyde dehydrogenase [Energy p | 100.0 | |
| PRK11809 | 1318 | putA trifunctional transcriptional regulator/proli | 100.0 | |
| cd07134 | 433 | ALDH_AlkH-like Pseudomonas putida Aldehyde dehydro | 100.0 | |
| cd07132 | 443 | ALDH_F3AB Aldehyde dehydrogenase family 3 members | 100.0 | |
| PRK11905 | 1208 | bifunctional proline dehydrogenase/pyrroline-5-car | 100.0 | |
| cd07087 | 426 | ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl | 100.0 | |
| cd07078 | 432 | ALDH NAD(P)+ dependent aldehyde dehydrogenase fami | 100.0 | |
| TIGR02288 | 551 | PaaN_2 phenylacetic acid degradation protein paaN. | 100.0 | |
| cd07129 | 454 | ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydr | 100.0 | |
| cd07127 | 549 | ALDH_PAD-PaaZ Phenylacetic acid degradation protei | 100.0 | |
| cd07084 | 442 | ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent | 100.0 | |
| cd07081 | 439 | ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldeh | 100.0 | |
| cd07121 | 429 | ALDH_EutE Ethanolamine utilization protein EutE-li | 100.0 | |
| PRK15398 | 465 | aldehyde dehydrogenase EutE; Provisional | 100.0 | |
| TIGR02518 | 488 | EutH_ACDH acetaldehyde dehydrogenase (acetylating) | 100.0 | |
| cd07122 | 436 | ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydr | 100.0 | |
| cd07079 | 406 | ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate redu | 100.0 | |
| PRK13805 | 862 | bifunctional acetaldehyde-CoA/alcohol dehydrogenas | 100.0 | |
| PRK00197 | 417 | proA gamma-glutamyl phosphate reductase; Provision | 100.0 | |
| KOG2452 | 881 | consensus Formyltetrahydrofolate dehydrogenase [Nu | 100.0 | |
| PLN02418 | 718 | delta-1-pyrroline-5-carboxylate synthase | 100.0 | |
| COG4230 | 769 | Delta 1-pyrroline-5-carboxylate dehydrogenase [Ene | 100.0 | |
| cd07077 | 397 | ALDH-like NAD(P)+-dependent aldehyde dehydrogenase | 100.0 | |
| cd06534 | 367 | ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase s | 100.0 | |
| TIGR01092 | 715 | P5CS delta l-pyrroline-5-carboxylate synthetase. T | 100.0 | |
| TIGR00407 | 398 | proA gamma-glutamyl phosphate reductase. The prosi | 100.0 | |
| KOG2455 | 561 | consensus Delta-1-pyrroline-5-carboxylate dehydrog | 100.0 | |
| KOG2453 | 507 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| cd07080 | 422 | ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC. Ac | 99.98 | |
| COG0014 | 417 | ProA Gamma-glutamyl phosphate reductase [Amino aci | 99.96 | |
| KOG4165 | 433 | consensus Gamma-glutamyl phosphate reductase [Amin | 99.89 | |
| PF05893 | 399 | LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR0086 | 99.63 | |
| PF03101 | 91 | FAR1: FAR1 DNA-binding domain; InterPro: IPR004330 | 99.62 | |
| PLN03097 | 846 | FHY3 Protein FAR-RED ELONGATED HYPOCOTYL 3; Provis | 99.59 | |
| KOG2449 | 157 | consensus Methylmalonate semialdehyde dehydrogenas | 99.56 | |
| PF08731 | 111 | AFT: Transcription factor AFT; InterPro: IPR014842 | 99.5 | |
| PF07368 | 215 | DUF1487: Protein of unknown function (DUF1487); In | 98.36 | |
| PRK11905 | 1208 | bifunctional proline dehydrogenase/pyrroline-5-car | 98.17 | |
| PF03108 | 67 | DBD_Tnp_Mut: MuDR family transposase; InterPro: IP | 97.76 | |
| PF00815 | 412 | Histidinol_dh: Histidinol dehydrogenase; InterPro: | 97.36 | |
| PLN02926 | 431 | histidinol dehydrogenase | 96.84 | |
| PRK12447 | 426 | histidinol dehydrogenase; Reviewed | 96.83 | |
| TIGR00069 | 393 | hisD histidinol dehydrogenase. This model describe | 96.81 | |
| PRK00877 | 425 | hisD bifunctional histidinal dehydrogenase/ histid | 96.81 | |
| COG0141 | 425 | HisD Histidinol dehydrogenase [Amino acid transpor | 96.72 | |
| PRK13770 | 416 | histidinol dehydrogenase; Provisional | 96.22 | |
| cd06572 | 390 | Histidinol_dh Histidinol dehydrogenase, HisD, E.C | 96.17 | |
| PRK11809 | 1318 | putA trifunctional transcriptional regulator/proli | 95.39 | |
| PRK13769 | 368 | histidinol dehydrogenase; Provisional | 94.75 | |
| PF15299 | 225 | ALS2CR8: Amyotrophic lateral sclerosis 2 chromosom | 92.51 | |
| PF04500 | 62 | FLYWCH: FLYWCH zinc finger domain; InterPro: IPR00 | 89.62 | |
| PF04684 | 496 | BAF1_ABF1: BAF1 / ABF1 chromatin reorganising fact | 88.2 |
| >PLN02419 methylmalonate-semialdehyde dehydrogenase [acylating] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-93 Score=853.52 Aligned_cols=473 Identities=68% Similarity=1.092 Sum_probs=444.1
Q ss_pred CCCccceEEcCEEecCCCCCeEEeecCCCCCeEEEecCCCHHHHHHHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHHh
Q 001665 198 DNNRVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRD 277 (1035)
Q Consensus 198 ~~~~~~~~I~G~~~~~~~~~~~~v~nP~tGevi~~v~~~s~~dv~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~ 277 (1035)
.+..+++||||+|+.+.++..++++||+||+++++++.++.+|+++||++|++||+.|+.++.++|.++|++++++|+++
T Consensus 110 ~~~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~eR~~iL~k~a~~L~~~ 189 (604)
T PLN02419 110 MPPRVPNLIGGSFVESQSSSFIDVINPATQEVVSKVPLTTNEEFKAAVSAAKQAFPLWRNTPITTRQRVMLKFQELIRKN 189 (604)
T ss_pred cccccceeECCEEecCCCCceEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHh
Confidence 45677899999999876667899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCccccCCCCCCcceeeeccceeEEEECCCCcchhchHHH
Q 001665 278 IDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWM 357 (1035)
Q Consensus 278 ~e~La~~i~~etGk~~~eA~~EV~~a~~~l~~~~~~a~~~~g~~~~~~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~ 357 (1035)
+++|+.++++|+||++.+++.||..+++.++++++.+....+...+....+...+++++|+|||++|+|||||+.+++++
T Consensus 190 ~~ela~~~~~E~GKp~~ea~~EV~~~i~~~~~~a~~a~~~~g~~~~~~~~~~~~~~~reP~GVV~~I~PwNfPl~l~~~~ 269 (604)
T PLN02419 190 MDKLAMNITTEQGKTLKDSHGDIFRGLEVVEHACGMATLQMGEYLPNVSNGVDTYSIREPLGVCAGICPFNFPAMIPLWM 269 (604)
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccCCCccceEEecCccEEEEECCCccHHHHHHHH
Confidence 99999999999999999999999999999999998877665554332223445678899999999999999999999999
Q ss_pred HHHHHhcCCEEEEeCCCCChhHHHHHHHHHHHhCCCCCcEEEeecchhhHhhhhcCCCccEEEEeccchHHHHHHHHHHh
Q 001665 358 FSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAA 437 (1035)
Q Consensus 358 l~~ALaaGNaVVlKPS~~ap~ta~~L~ell~eAGlP~gvv~vV~g~~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~ 437 (1035)
+++||++||+||+|||+.+|+++.+|++++.++|+|+|+||+|+|+.+.+.+|+.|++|++|+||||+.+|+.|+++|++
T Consensus 270 iapALaAGNtVVlKPSe~tp~ta~~l~~l~~eAGlP~GvvnvV~G~~~~~~~L~~~~~Vd~V~FTGSt~vG~~I~~~Aa~ 349 (604)
T PLN02419 270 FPVAVTCGNTFILKPSEKDPGASVILAELAMEAGLPDGVLNIVHGTNDTVNAICDDEDIRAVSFVGSNTAGMHIYARAAA 349 (604)
T ss_pred HHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHhCcCcceEEEEeCChHHHHHHHhCCCCCEEEEeCChHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999977888999999999999999999999999999999
Q ss_pred cCCceeecCCCcceEEEcCCCCHHHHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHhcccccCCCCCCC
Q 001665 438 RGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDASAD 516 (1035)
Q Consensus 438 ~l~Pv~lElGGknp~IV~~dADld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d~~~~ 516 (1035)
+++|+++|||||||+||++|||++.||+.|++++|+|+||.|+++++|||+++ + +|+++|+++++++++|+|.+++++
T Consensus 350 ~lk~v~LELGGknp~IV~~DADld~Aa~~iv~g~f~naGQ~C~A~~Rv~V~~~-~d~f~e~l~~~~~~l~vG~p~d~~t~ 428 (604)
T PLN02419 350 KGKRIQSNMGAKNHGLVLPDANIDATLNALLAAGFGAAGQRCMALSTVVFVGD-AKSWEDKLVERAKALKVTCGSEPDAD 428 (604)
T ss_pred cCCcEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhhCCCCcCCCCEEEEeCc-HHHHHHHHHHHHHHhccCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999988 6 899999999999999999999999
Q ss_pred cCCCcCHHHHHHHHHHHHHHHHCCCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecCCHHHH
Q 001665 517 VGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEA 596 (1035)
Q Consensus 517 ~Gpli~~~~~~rl~~~i~~av~~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeA 596 (1035)
+|||+++.+++++.++|++|+++||++++||.....++...|+|++||||.+++++|.+++||+||||++|++|+|+|||
T Consensus 429 ~GPlis~~~~~~v~~~i~~A~~~GAkvl~GG~~~~~~~~~~G~f~~PTVL~~v~~d~~i~~eEiFGPVl~V~~~~~~dEA 508 (604)
T PLN02419 429 LGPVISKQAKERICRLIQSGVDDGAKLLLDGRDIVVPGYEKGNFIGPTILSGVTPDMECYKEEIFGPVLVCMQANSFDEA 508 (604)
T ss_pred ccCCCCHHHHHHHHHHHHHHHhcCCEEEeCCccccCCCCCCCeEEeeEEEeCCCCCCHHHcCCCcCCEEEEEecCCHHHH
Confidence 99999999999999999999999999999997432222346999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCcEEEEEcCCHHHHHHHHhccceeEEEEcCCc-----CCCCCCCCCCCCC--CcCcHHHHHhcceeeEEEE
Q 001665 597 IKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPV-----PSSFSSINESGEF--NFCGKSGVQFYTQIKTVAQ 669 (1035)
Q Consensus 597 I~laN~~~~GLsasVfS~d~~~a~~~a~~l~sG~V~IN~~~-----~~PfGG~g~SG~G--~~~G~~g~~~ft~~k~v~~ 669 (1035)
|+++|+++|||++||||+|.+.+.++++++++|.|+||+.. .+||||+|.||+| +++|.+|+++|++.|+|+.
T Consensus 509 I~laN~s~yGLaasVfT~d~~~a~~~a~~l~aG~V~IN~~~~~~~~~~PFGG~k~SG~G~~~~~G~~gl~~ft~~K~v~~ 588 (604)
T PLN02419 509 ISIINKNKYGNGAAIFTSSGAAARKFQMDIEAGQIGINVPIPVPLPFFSFTGNKASFAGDLNFYGKAGVDFFTQIKLVTQ 588 (604)
T ss_pred HHHHhCCCCCcEEEEECCCHHHHHHHHHhCCeeeEEEcCCCCCCCCCCCcCCcCcCCCCCCcccHHHHHHHhhCeEEEEE
Confidence 99999999999999999999999999999999999999752 1899999999999 8999999999999999987
Q ss_pred ec
Q 001665 670 QW 671 (1035)
Q Consensus 670 ~~ 671 (1035)
.+
T Consensus 589 ~~ 590 (604)
T PLN02419 589 KQ 590 (604)
T ss_pred cc
Confidence 65
|
|
| >KOG2451 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-94 Score=772.76 Aligned_cols=467 Identities=30% Similarity=0.466 Sum_probs=449.1
Q ss_pred ccceEEcCEEecCCCCCeEEeecCCCCCeEEEecCCCHHHHHHHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHHhHHH
Q 001665 201 RVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDK 280 (1035)
Q Consensus 201 ~~~~~I~G~~~~~~~~~~~~v~nP~tGevi~~v~~~s~~dv~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e~ 280 (1035)
+-+.||+|+|+++..+++|+|.||++||+|+.|+..+.++.++|++.|.+||+.|++++..+|.++|+++.++|.+|.++
T Consensus 23 ~~~~~igGkWv~s~~~~tF~V~nPa~geii~~V~~~~V~e~~kAI~aA~EaF~s~~~~takeRs~lLrkwy~Li~en~dd 102 (503)
T KOG2451|consen 23 RAQSYIGGKWVDSPDNKTFEVDNPANGEIIGKVADMTVEEAEKAIDAAYEAFKSYRNLTAKERSALLRKWYELIMENKDD 102 (503)
T ss_pred chhccccceeeccCCCCeeeccCCCccchhhcccCCcHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhchHH
Confidence 45679999999998889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCccccCCCCCCcceeeeccceeEEEECCCCcchhchHHHHHH
Q 001665 281 LAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSI 360 (1035)
Q Consensus 281 La~~i~~etGk~~~eA~~EV~~a~~~l~~~~~~a~~~~g~~~~~~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~ 360 (1035)
|++++++|.|||+.||++||..+..+++||++.+++..|..++...+.....+.++|+||+++|+|||||......++.+
T Consensus 103 La~iiTlE~GKpL~eA~gEv~y~a~f~eWyAeEA~RvyGdii~s~~~~rr~i~ikQPvGV~alItPWNFP~AMItRK~gA 182 (503)
T KOG2451|consen 103 LATIITLENGKPLGEAKGEVAYSAAFFEWYAEEARRVYGDIIPSLNPNRRLIVIKQPVGVVALITPWNFPAAMITRKAGA 182 (503)
T ss_pred HHHHHhhhcCCchhhccceeehhHHHHHHHHHHhhhhhccccCCCCCCceEEEEeccceeEEEecCcCChHHHHHhHHHH
Confidence 99999999999999999999999999999999999999988877667777888999999999999999999999999999
Q ss_pred HHhcCCEEEEeCCCCChhHHHHHHHHHHHhCCCCCcEEEeecc----hhhHhhhhcCCCccEEEEeccchHHHHHHHHHH
Q 001665 361 AVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGT----NDVINHICDDEDIKAISFVASSTASVQMYARAA 436 (1035)
Q Consensus 361 ALaaGNaVVlKPS~~ap~ta~~L~ell~eAGlP~gvv~vV~g~----~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa 436 (1035)
||++||+||+||++.+|++++.|+++..+||+|+|++|||+++ .+.+.+|+.+|+|.+|.||||+.+|+.++++++
T Consensus 183 ALAaGCTvVvkPs~~TPlsaLala~lA~~AGiP~Gv~NVit~~~~~a~eig~~lctsp~VrkisFTGST~VGKiL~~qsa 262 (503)
T KOG2451|consen 183 ALAAGCTVVVKPSEDTPLSALALAKLAEEAGIPAGVLNVITADASNAAEIGKELCTSPDVRKISFTGSTNVGKILMAQSA 262 (503)
T ss_pred HHhcCceEEEccCCCCchHHHHHHHHHHHcCCCCcceEEEecCCCChHHHHHHhhcCCceeeEEeeccchHHHHHHHhhh
Confidence 9999999999999999999999999999999999999999963 378999999999999999999999999999999
Q ss_pred hcCCceeecCCCcceEEEcCCCCHHHHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHhcccccCCCCCC
Q 001665 437 ARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDASA 515 (1035)
Q Consensus 437 ~~l~Pv~lElGGknp~IV~~dADld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d~~~ 515 (1035)
...|+|.+|||||.|+||++|||||.|++..+..+|.++||.|.+.+|++||++++ +|++.|.++++++++|+++++++
T Consensus 263 stvKkvslELGGNAPfIVFddadld~Av~g~mA~KFr~~GQtCVcaNR~yVh~~iyD~Fv~~l~e~vkkl~vGdG~~~~t 342 (503)
T KOG2451|consen 263 STVKKVSLELGGNAPFIVFDDADLDQAVEGAMACKFRNSGQTCVCANRVYVHDSIYDKFVSKLAEAVKKLKVGDGLDPGT 342 (503)
T ss_pred hhhhheehhhcCCCceEEecCcCHHHHHHHHHHhhhccCCceeEecceeEEehhhHHHHHHHHHHHHHheeccCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999 99999999999999999999999
Q ss_pred CcCCCcCHHHHHHHHHHHHHHHHCCCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecCCHHH
Q 001665 516 DVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEE 595 (1035)
Q Consensus 516 ~~Gpli~~~~~~rl~~~i~~av~~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~ee 595 (1035)
..||||+..+++++..++++|+.+||++++||.... +....|++||||.+|+.+|-+..||+||||.+|++|+|.||
T Consensus 343 t~GpLIne~av~Kve~~v~DAvsKga~ii~GGk~~~---~lg~~fyePTvl~~V~~~m~~s~eEtFGPla~v~kFdteeE 419 (503)
T KOG2451|consen 343 TQGPLINEKAVEKVEKHVEDAVSKGAKIILGGKERS---ELGPTFYEPTVLSNVTQNMLVSSEETFGPLASVFKFDTEEE 419 (503)
T ss_pred ccCCccCHHHHHHHHHHHHHHHhcCCeEEeCCeEcc---ccCCccccceEeecCCccceeeccccccccceeeeeCCHHH
Confidence 999999999999999999999999999999998531 23469999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCcEEEEEcCCHHHHHHHHhccceeEEEEcCCcC----CCCCCCCCCCCCCcCcHHHHHhcceeeEEEEe
Q 001665 596 AIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPVP----SSFSSINESGEFNFCGKSGVQFYTQIKTVAQQ 670 (1035)
Q Consensus 596 AI~laN~~~~GLsasVfS~d~~~a~~~a~~l~sG~V~IN~~~~----~PfGG~g~SG~G~~~G~~g~~~ft~~k~v~~~ 670 (1035)
+|+++|++..||++|+||+|.+...+++++|++|+|.+|.... .||||+++||+|++++++|+++|+..|.+++.
T Consensus 420 vi~~ANdt~vGLAgYvfs~~~s~~~rVae~LEvGmVGvNeglis~~~~pFGGVKeSG~GREgskyGidey~~ik~icig 498 (503)
T KOG2451|consen 420 VIEWANDTRVGLAGYVFSNNLSRLFRVAEALEVGMVGVNEGLISDAEAPFGGVKESGFGREGSKYGIDEYLVIKYICIG 498 (503)
T ss_pred HHHHhccCccceeeEEeccCHHHHHHHHHHHhcceeecccceecccccCcCCccccccCccccccchhhhhhhheeeec
Confidence 9999999999999999999999999999999999999997632 89999999999999999999999999999874
|
|
| >KOG2450 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-93 Score=804.56 Aligned_cols=464 Identities=33% Similarity=0.484 Sum_probs=442.1
Q ss_pred cceEEcCEEecCCCCCeEEeecCCCCCeEEEecCCCHHHHHHHHHHHHHhhH--hhhCCCHHHHHHHHHHHHHHHHHhHH
Q 001665 202 VSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFP--AWKNTPVATRQRIMFKLQELIRRDID 279 (1035)
Q Consensus 202 ~~~~I~G~~~~~~~~~~~~v~nP~tGevi~~v~~~s~~dv~~av~~Ar~A~~--~W~~~s~~~R~~iL~~la~~L~~~~e 279 (1035)
..+||||+|+++.++++++++||+||+++++|+.++.+||+++|++||+||+ .|+.++..+|.++|+++|++++++++
T Consensus 21 ~~lfin~e~~~~~s~kt~~~~nP~tg~~i~~v~~~~~~dVd~aV~aAr~Af~~~~W~~~~~~~R~~~L~~~Adlie~~~~ 100 (501)
T KOG2450|consen 21 LGLFINGEFVDSVSGKTFPVVNPATGEVIAKVAEATEEDVDEAVKAARSAFKLVDWAKRDAAERGRLLRKLADLIEQDAD 100 (501)
T ss_pred hheeecCeeecccCCceeeeecCCCCCeEEEeccccHHHHHHHHHHHHHhcCcCccccCCHHHHHHHHHHHHHHHHhhhH
Confidence 5799999999998999999999999999999999999999999999999999 79999999999999999999999999
Q ss_pred HHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHhhcCccccCCCCCCcceeeeccceeEEEECCCCcchhchHHHH
Q 001665 280 KLAMNITVEQGTTLKAAQ-RDVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMF 358 (1035)
Q Consensus 280 ~La~~i~~etGk~~~eA~-~EV~~a~~~l~~~~~~a~~~~g~~~~~~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l 358 (1035)
.||...+.+.||++.+++ .|+..+++.++|+++++....+...+. ......++.++|+|||+.|.|||||+....|++
T Consensus 101 ~lA~~E~~d~GKp~~~a~~~Dl~~~~~~~ry~ag~ad~~~~~~~~~-~~~~~~yt~~eP~GV~G~I~pWN~Pllm~awKl 179 (501)
T KOG2450|consen 101 VLAALEVLDNGKPYPEALVSDLPPAIDCFRYYAGWADKIHGSTIPT-DGEFFAYTRREPIGVCGQIIPWNFPLLMQAWKL 179 (501)
T ss_pred HHhhhcccccCCcchhhhhcCchhhhhHHHhhccchhhcccccCCC-CCceEEEecCCcceeeeEeccCchHHHHHHHhh
Confidence 999999999999999998 899999999999999887665543332 233467889999999999999999999999999
Q ss_pred HHHHhcCCEEEEeCCCCChhHHHHHHHHHHHhCCCCCcEEEeec-chhhHhhhhcCCCccEEEEeccchHHHHHHHHHHh
Q 001665 359 SIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHG-TNDVINHICDDEDIKAISFVASSTASVQMYARAAA 437 (1035)
Q Consensus 359 ~~ALaaGNaVVlKPS~~ap~ta~~L~ell~eAGlP~gvv~vV~g-~~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~ 437 (1035)
++||++||+||+||++++|+++..+++++.++|+|+|++|+|+| +.+.+.+|+.|++|++|.||||+.+|+.|++++|+
T Consensus 180 aPALa~GNtvV~Kpae~tplsal~~~~l~~eaG~P~GVvNii~G~G~~aG~al~sH~dv~kiaFTGSt~~G~~I~~aaa~ 259 (501)
T KOG2450|consen 180 APALAAGNTVVLKPAEQTPLTALYLASLCKEAGFPPGVVNIVPGSGTTAGAALASHPDVDKVAFTGSTPVGKEIMEAAAE 259 (501)
T ss_pred hhHHhhCcEEEecCCCCCCchHHHHHHHhHHhcCCcceEEEccCCCchHHHHHhhCCCCceEEecCCCcchhHHhhhhhh
Confidence 99999999999999999999999999999999999999999999 56899999999999999999999999999999885
Q ss_pred c-CCceeecCCCcceEEEcCCCCHHHHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHh-cccccCCCCC
Q 001665 438 R-GKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKA-LKVNVGTDAS 514 (1035)
Q Consensus 438 ~-l~Pv~lElGGknp~IV~~dADld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~-lkvG~p~d~~ 514 (1035)
. +|||+||||||+|.||++|||++.|++.++.+.|+|+||.|++.+|++|+++++ +|+++++++.++ +++|+|.++.
T Consensus 260 ~n~K~vtLElGGKsp~Ivf~Dadld~av~~~~~~iF~nqGq~C~a~sR~~Vqe~iydefv~~~v~~a~~~~kvGdP~~~~ 339 (501)
T KOG2450|consen 260 SNLKPVTLELGGKSPIIVFDDADLDLAVENAAFGIFFNQGQCCTAGSRVFVQESIYDEFVEKFVAAAKKKLKVGDPFDEG 339 (501)
T ss_pred cCCceeccccCCCCcceEecccchHHHHHHHHHHhhcccccccccCceeEEechHHHHHHHHHHHHHhcccccCCCCCcc
Confidence 4 899999999999999999999999999999999999999999999999999999 999999999865 9999999999
Q ss_pred CCcCCCcCHHHHHHHHHHHHHHHHCCCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecCCHH
Q 001665 515 ADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLE 594 (1035)
Q Consensus 515 ~~~Gpli~~~~~~rl~~~i~~av~~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~e 594 (1035)
+..||.+++.|++||..||+.++++||++++||... ...|+||.|||+.+|..+|.|++||+||||++|++|++.|
T Consensus 340 ~~qG~~i~~~q~ekI~~yi~~~k~eGa~l~~gG~~~----g~~Gyfi~Ptv~~~v~~~m~i~~EEIFGPVv~v~~F~t~e 415 (501)
T KOG2450|consen 340 TEQGPQISKTQYEKILGYIESGKKEGATLLCGGVRL----GDKGYFIKPTVFTNVTDDMRIAKEEIFGPVVVVLKFKTEE 415 (501)
T ss_pred cccccccCHHHHHHHHHHHHHHHhcCCEEEecCccc----CCCceEECCeeccCCChhhhhhHhhccCceEEEEecCcHH
Confidence 999999999999999999999999999999999762 2689999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCcEEEEEcCCHHHHHHHHhccceeEEEEcCCcC----CCCCCCCCCCCCCcCcHHHHHhcceeeEEEEe
Q 001665 595 EAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPVP----SSFSSINESGEFNFCGKSGVQFYTQIKTVAQQ 670 (1035)
Q Consensus 595 eAI~laN~~~~GLsasVfS~d~~~a~~~a~~l~sG~V~IN~~~~----~PfGG~g~SG~G~~~G~~g~~~ft~~k~v~~~ 670 (1035)
|+|+++|++.|||+++|||+|.+.+++++.++++|+||||+... .||||+|.||+||+.|.+++++|++.|+|++.
T Consensus 416 E~i~~AN~t~yGLAa~V~t~dl~~a~~va~~l~aGtVwiN~y~~~~~~~PfgG~K~SG~GRE~g~~~l~~ytevKtv~v~ 495 (501)
T KOG2450|consen 416 EVIERANNTTYGLAAGVFTKDLDKAHRVANALQAGTVWINCYNVFDAQVPFGGFKMSGIGRELGEYGLEAYTEVKTVTVK 495 (501)
T ss_pred HHHHHhcCCcccceeeEeccChHHHHHHHHHhcCceEEEeccccccccCCccccccccCCccccHHHHhhcceeeEEEEe
Confidence 99999999999999999999999999999999999999998742 99999999999999999999999999999886
|
|
| >PRK11241 gabD succinate-semialdehyde dehydrogenase I; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-92 Score=831.08 Aligned_cols=464 Identities=27% Similarity=0.449 Sum_probs=437.2
Q ss_pred cceEEcCEEecCCCCCeEEeecCCCCCeEEEecCCCHHHHHHHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHHhHHHH
Q 001665 202 VSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKL 281 (1035)
Q Consensus 202 ~~~~I~G~~~~~~~~~~~~v~nP~tGevi~~v~~~s~~dv~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e~L 281 (1035)
.++||||+|+.+.++..++++||+||+++++++.++.+|+++|+++|++||+.|+.++.++|.++|++++++|++++++|
T Consensus 11 ~~~~i~G~~~~~~~~~~~~v~nP~tg~~v~~~~~~~~~~v~~av~~A~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~el 90 (482)
T PRK11241 11 QQALINGEWLDANNGEVIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKERANILRRWFNLMMEHQDDL 90 (482)
T ss_pred ccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 35899999997656788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCccccCCCCCCcceeeeccceeEEEECCCCcchhchHHHHHHH
Q 001665 282 AMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIA 361 (1035)
Q Consensus 282 a~~i~~etGk~~~eA~~EV~~a~~~l~~~~~~a~~~~g~~~~~~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~A 361 (1035)
++++++|+||++.+++.|+..+++.+++++..+....+...+....+...+++++|+|||++|+|||||+.++++++++|
T Consensus 91 a~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~A 170 (482)
T PRK11241 91 ARLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPA 170 (482)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEeeceEEEEECCCcChHHHHHHHHHHH
Confidence 99999999999999999999999999999887766555433322234446788999999999999999999999999999
Q ss_pred HhcCCEEEEeCCCCChhHHHHHHHHHHHhCCCCCcEEEeecc-hhhHhhhhcCCCccEEEEeccchHHHHHHHHHHhcCC
Q 001665 362 VTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGT-NDVINHICDDEDIKAISFVASSTASVQMYARAAARGK 440 (1035)
Q Consensus 362 LaaGNaVVlKPS~~ap~ta~~L~ell~eAGlP~gvv~vV~g~-~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~l~ 440 (1035)
|++||+||+|||+.+|+++.+|++++.++|+|+|+||+|+|+ .+.+..|+.|++|++|+||||+.+|+.|++.|+++++
T Consensus 171 LaaGN~VVlKPs~~tp~~~~~l~~~~~~aglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~FTGS~~~G~~i~~~aa~~l~ 250 (482)
T PRK11241 171 LAAGCTMVLKPASQTPFSALALAELAIRAGIPAGVFNVVTGSAGAVGGELTSNPLVRKLSFTGSTEIGRQLMEQCAKDIK 250 (482)
T ss_pred HHhCCEEEEECCCCChHHHHHHHHHHHHcCCCcccEEEEecCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCC
Confidence 999999999999999999999999999999999999999985 5778999999999999999999999999999999999
Q ss_pred ceeecCCCcceEEEcCCCCHHHHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHhcccccCCCCCCCcCC
Q 001665 441 RVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDASADVGP 519 (1035)
Q Consensus 441 Pv~lElGGknp~IV~~dADld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d~~~~~Gp 519 (1035)
|+++|||||||+||++|||++.|++.+++++|+|+||.|+++++||||++++ +|+++|+++++++++|+|.++++++||
T Consensus 251 ~~~lElGGknp~IV~~dADld~aa~~i~~~~f~~aGQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~Gp 330 (482)
T PRK11241 251 KVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAVSKLHIGDGLEKGVTIGP 330 (482)
T ss_pred cEEEECCCCCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCeEEEEeHHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCC
Confidence 9999999999999999999999999999999999999999999999999998 899999999999999999999999999
Q ss_pred CcCHHHHHHHHHHHHHHHHCCCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecCCHHHHHHH
Q 001665 520 VVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKM 599 (1035)
Q Consensus 520 li~~~~~~rl~~~i~~av~~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI~l 599 (1035)
|+++.+++++.++|++++++||++++||... ..+|+|++||||.+++++|.+++||+||||++|++|+|+||||++
T Consensus 331 li~~~~~~~v~~~i~~a~~~Ga~vl~GG~~~----~~~g~f~~Ptvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eai~~ 406 (482)
T PRK11241 331 LIDEKAVAKVEEHIADALEKGARVVCGGKAH----ELGGNFFQPTILVDVPANAKVAKEETFGPLAPLFRFKDEADVIAQ 406 (482)
T ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEecCCCC----CCCCeEEeeEEEECCCCCChhhhCcCcCCEEEEEEeCCHHHHHHH
Confidence 9999999999999999999999999998641 136899999999999999999999999999999999999999999
Q ss_pred HHhcCCCcEEEEEcCCHHHHHHHHhccceeEEEEcCCc----CCCCCCCCCCCCCCcCcHHHHHhcceeeEEEE
Q 001665 600 VNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPV----PSSFSSINESGEFNFCGKSGVQFYTQIKTVAQ 669 (1035)
Q Consensus 600 aN~~~~GLsasVfS~d~~~a~~~a~~l~sG~V~IN~~~----~~PfGG~g~SG~G~~~G~~g~~~ft~~k~v~~ 669 (1035)
+|+++|||++||||+|.+.++++++++++|.|+||+.. .+||||+|.||+|+++|.+|+++||+.|++++
T Consensus 407 aN~s~~GL~a~Vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~g~~~ft~~k~v~~ 480 (482)
T PRK11241 407 ANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCI 480 (482)
T ss_pred hhCCCCCceEEEEcCCHHHHHHHHHHcCccEEEECCCCCCCCCCCcCCccccccCcccHHHHHHHhhcceEEEE
Confidence 99999999999999999999999999999999999763 28999999999999999999999999999864
|
|
| >COG1012 PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-90 Score=815.42 Aligned_cols=459 Identities=39% Similarity=0.565 Sum_probs=434.8
Q ss_pred ceEEcCEEecCCCCCeEEeecCCCCCeEEEecCCCHHHHHHHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHHhHHHHH
Q 001665 203 SNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLA 282 (1035)
Q Consensus 203 ~~~I~G~~~~~~~~~~~~v~nP~tGevi~~v~~~s~~dv~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e~La 282 (1035)
.+||||+|+.... +++++||+||++++.++.++.+|+++|+++|+.||+.|+.+++.+|.++|++++++|+++.++|+
T Consensus 2 ~~~i~g~~~~~~~--~~~~~nP~tg~~i~~~~~a~~~dv~~Av~aA~~a~~~W~~~~~~eR~~iL~~~a~~l~~~~~ela 79 (472)
T COG1012 2 KLLIDGEWVDGAS--TIEVINPATGEVIATVPAATAEDVDAAVAAARAAFEAWSRLSAEERAAILRRIADLLEARAEELA 79 (472)
T ss_pred CccCCCeecCCCC--ceeeeCCCCCCEEeeecCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 5799999998754 89999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCccccCCCCCCcceeeeccceeEEEECCCCcchhchHHHHHHHH
Q 001665 283 MNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAV 362 (1035)
Q Consensus 283 ~~i~~etGk~~~eA~~EV~~a~~~l~~~~~~a~~~~g~~~~~~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~AL 362 (1035)
.++++|+||++.+++.|+..+++.++++++.+....+...+... +...+++++|+|||++|+|||||+++.++++++||
T Consensus 80 ~~~~~e~Gk~i~ea~~ei~~~~~~~~~~a~~~~~~~~~~~~~~~-~~~~~~~~~P~GVv~~I~PwNfP~~~~~~k~apAL 158 (472)
T COG1012 80 ALITLETGKPISEARGEIARAADFIRYYAEEARRLEGETIPTDK-GSKALVRREPLGVVGAITPWNFPLALAAWKLAPAL 158 (472)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCCCC-CcceEEEeecceEEEEECCCCCHHHHHHhhHHHHH
Confidence 99999999999999999999999999999988766665433222 56778999999999999999999999999999999
Q ss_pred hcCCEEEEeCCCCChhHHHHHHHHHHHhCCCCCcEEEeecc-hhhHhhhhcCCCccEEEEeccchHHHHHHHHHHhcCCc
Q 001665 363 TCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGT-NDVINHICDDEDIKAISFVASSTASVQMYARAAARGKR 441 (1035)
Q Consensus 363 aaGNaVVlKPS~~ap~ta~~L~ell~eAGlP~gvv~vV~g~-~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~l~P 441 (1035)
++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|+ .+.+++|+.||+|++|.||||+.+|+.|++.|++++||
T Consensus 159 aaGntVV~KPse~tp~sa~~l~~~~~~aglP~Gv~nvv~g~~~~~g~~l~~~p~v~~i~FTGSt~~G~~i~~~Aa~~~k~ 238 (472)
T COG1012 159 AAGNTVVLKPSEQTPLSALALAELAAEAGLPAGVLNVVTGGGAEVGDALVAHPDVDAISFTGSTAVGRAIAAAAAANLKP 238 (472)
T ss_pred HcCCEEEEECcccCcHHHHHHHHHHHHhCCCCCeEEEEeCCCchHHHHHhcCCCCCEEEEECChHHHHHHHHHHhhcCCc
Confidence 99999999999999999999999999999999999999994 46889999999999999999999999999999999999
Q ss_pred eeecCCCcceEEEcCCCCHHHHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHh-cccccCCCCCCCcCC
Q 001665 442 VQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKA-LKVNVGTDASADVGP 519 (1035)
Q Consensus 442 v~lElGGknp~IV~~dADld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~-lkvG~p~d~~~~~Gp 519 (1035)
+++|||||||+||++|||++.|++.+++++|+|+||.|++.+|+||+++++ +|+++|+++ ++ +++|++.|+.+++||
T Consensus 239 ~~lELGGk~p~IV~~dAdl~~Av~~~~~g~f~n~GQ~C~a~~R~~V~~~v~d~f~~~l~~~-~~~l~~Gd~~d~~t~~Gp 317 (472)
T COG1012 239 VTLELGGKSPAIVLEDADLDAAVDAAVFGAFFNAGQRCTAASRLIVHESVYDEFVERLVAR-AASLKVGDPLDPSTDLGP 317 (472)
T ss_pred EEEECCCCCCeEECCCCCHHHHHHHHHHHHHhCCCCCccCCeEEEEehhhHHHHHHHHHHH-HhcCCCCCCCCCCCccCC
Confidence 999999999999999999999999999999999999999999999999999 999999999 55 999998899999999
Q ss_pred CcCHHHHHHHHHHHHHHHHCCCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecCCHHHHHHH
Q 001665 520 VVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKM 599 (1035)
Q Consensus 520 li~~~~~~rl~~~i~~av~~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI~l 599 (1035)
++++.+++++.++|++++++|++++.||.. + . |+|++|||+.+++++|.+++||+||||++|++|+|+||||++
T Consensus 318 li~~~~~~~v~~~i~~a~~~G~~~~~Gg~~---~--~-g~~~~PTv~~~v~~~~~i~~eEiFGPVl~v~~~~~~dEAi~l 391 (472)
T COG1012 318 LISEEQLDRVEGYIEDAVAEGARLLAGGKR---P--G-GYFVEPTILEGVTPDMRIAREEIFGPVLPVIRFKDEEEAIEL 391 (472)
T ss_pred CCCHHHHHHHHHHHHHHHHcCCEEEeCCcC---C--C-CeEECCEEEecCCCCChhhhccccCCceEEEEeCCHHHHHHH
Confidence 999999999999999999999999998872 2 2 999999999999999999999999999999999999999999
Q ss_pred HHhcCCCcEEEEEcCCHHHHHHHHhccceeEEEEcCCc-----C-CCCCCCCCCCCCCcCcHHHHHhcceeeEEEEec
Q 001665 600 VNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPV-----P-SSFSSINESGEFNFCGKSGVQFYTQIKTVAQQW 671 (1035)
Q Consensus 600 aN~~~~GLsasVfS~d~~~a~~~a~~l~sG~V~IN~~~-----~-~PfGG~g~SG~G~~~G~~g~~~ft~~k~v~~~~ 671 (1035)
+|+++|||+++|||+|..++.+++.++++|+|+||+.. . +||||+|.||+|+++|.+++++|++.|++...+
T Consensus 392 AN~t~yGL~a~v~t~d~~~~~~~~~~l~aG~v~iN~~~~~~~~~~~PFGG~k~SG~G~~~g~~~~~~~~~~k~v~~~~ 469 (472)
T COG1012 392 ANDTEYGLAAAIFTRDLARAFRVARRLEAGMVGINDYTGGADIAYLPFGGVKQSGLGREGGKYGLEEFTEVKTVTIKL 469 (472)
T ss_pred HhCCCCCceEEEEcCCHHHHHHHHhcCCeeEEEECCCCCCCCCCCCCCCCcccccCCccchHHHHHHHhcceEEEEec
Confidence 99999999999999999999999999999999999763 1 899999999999999999999999999998764
|
|
| >PLN02766 coniferyl-aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-90 Score=818.91 Aligned_cols=470 Identities=30% Similarity=0.429 Sum_probs=439.5
Q ss_pred ccceEEcCEEecCCCCCeEEeecCCCCCeEEEecCCCHHHHHHHHHHHHHhhH--hhhCCCHHHHHHHHHHHHHHHHHhH
Q 001665 201 RVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFP--AWKNTPVATRQRIMFKLQELIRRDI 278 (1035)
Q Consensus 201 ~~~~~I~G~~~~~~~~~~~~v~nP~tGevi~~v~~~s~~dv~~av~~Ar~A~~--~W~~~s~~~R~~iL~~la~~L~~~~ 278 (1035)
.+++||||+|+.+.++..++++||+||+++++++.++.+|++++|++|++||+ .|+.++.++|+++|++++++|+++.
T Consensus 20 ~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~ 99 (501)
T PLN02766 20 FTKLFINGEFVDAASGKTFETRDPRTGEVIARIAEGDKEDVDLAVKAAREAFDHGPWPRMSGFERGRIMMKFADLIEEHI 99 (501)
T ss_pred cccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhH
Confidence 44589999999876678899999999999999999999999999999999998 5999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHhhcCccccCCCCCCcceeeeccceeEEEECCCCcchhchHHH
Q 001665 279 DKLAMNITVEQGTTLKAAQ-RDVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWM 357 (1035)
Q Consensus 279 e~La~~i~~etGk~~~eA~-~EV~~a~~~l~~~~~~a~~~~g~~~~~~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~ 357 (1035)
++|++++++|+||++.+++ .|+..++..+++++..+....++..... .+...+++++|+|||++|+|||||+.+++++
T Consensus 100 ~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~-~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 178 (501)
T PLN02766 100 EELAALDTIDAGKLFALGKAVDIPAAAGLLRYYAGAADKIHGETLKMS-RQLQGYTLKEPIGVVGHIIPWNFPSTMFFMK 178 (501)
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccC-CCceEEEEeccceEEEEECCCCChHHHHHHH
Confidence 9999999999999999997 5999999999999987766555433221 2334678899999999999999999999999
Q ss_pred HHHHHhcCCEEEEeCCCCChhHHHHHHHHHHHhCCCCCcEEEeecc-hhhHhhhhcCCCccEEEEeccchHHHHHHHHHH
Q 001665 358 FSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGT-NDVINHICDDEDIKAISFVASSTASVQMYARAA 436 (1035)
Q Consensus 358 l~~ALaaGNaVVlKPS~~ap~ta~~L~ell~eAGlP~gvv~vV~g~-~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa 436 (1035)
+++||++||+||+|||+.+|.++.+|++++.++|+|+|+||+|+|+ .+.+..|+.|++|++|+||||+.+|+.|++.|+
T Consensus 179 ~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~p~v~~V~FTGS~~~G~~i~~~aa 258 (501)
T PLN02766 179 VAPALAAGCTMVVKPAEQTPLSALFYAHLAKLAGVPDGVINVVTGFGPTAGAAIASHMDVDKVSFTGSTEVGRKIMQAAA 258 (501)
T ss_pred HHHHHHcCCEEEEeCCCCchHHHHHHHHHHHhcCCCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999999995 577899999999999999999999999999998
Q ss_pred -hcCCceeecCCCcceEEEcCCCCHHHHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHhcccccCCCCC
Q 001665 437 -ARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDAS 514 (1035)
Q Consensus 437 -~~l~Pv~lElGGknp~IV~~dADld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d~~ 514 (1035)
++++|+++|||||||+||++|||++.|++.+++++|+|+||.|+++++|||+++++ +|+++|+++++++++|+|.+++
T Consensus 259 ~~~l~~~~lElGGknp~iV~~dADl~~Aa~~i~~g~f~n~GQ~C~a~~ri~V~~si~d~f~~~l~~~~~~l~~G~p~~~~ 338 (501)
T PLN02766 259 TSNLKQVSLELGGKSPLLIFDDADVDMAVDLALLGIFYNKGEICVASSRVYVQEGIYDEFVKKLVEKAKDWVVGDPFDPR 338 (501)
T ss_pred hcCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhccCCCCCCCC
Confidence 58999999999999999999999999999999999999999999999999999998 9999999999999999999999
Q ss_pred CCcCCCcCHHHHHHHHHHHHHHHHCCCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecCCHH
Q 001665 515 ADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLE 594 (1035)
Q Consensus 515 ~~~Gpli~~~~~~rl~~~i~~av~~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~e 594 (1035)
+++|||+++.+++++.++|++++.+||++++||... ...|+|++||||.+++++|++++||+||||++|++|+|+|
T Consensus 339 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~----~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~d 414 (501)
T PLN02766 339 ARQGPQVDKQQFEKILSYIEHGKREGATLLTGGKPC----GDKGYYIEPTIFTDVTEDMKIAQDEIFGPVMSLMKFKTVE 414 (501)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCCcC----CCCCeEEeeEEEecCCCCChhhhCCccCceEEEEEeCCHH
Confidence 999999999999999999999999999999998642 2468999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCcEEEEEcCCHHHHHHHHhccceeEEEEcCCcC----CCCCCCCCCCCCCcCcHHHHHhcceeeEEEEe
Q 001665 595 EAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPVP----SSFSSINESGEFNFCGKSGVQFYTQIKTVAQQ 670 (1035)
Q Consensus 595 eAI~laN~~~~GLsasVfS~d~~~a~~~a~~l~sG~V~IN~~~~----~PfGG~g~SG~G~~~G~~g~~~ft~~k~v~~~ 670 (1035)
|||+++|+++|||++||||+|.+.+.++++++++|.|+||+... +||||+|.||+|+++|++|+++||+.|+++..
T Consensus 415 eai~~aN~~~~GL~a~Vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~v~~~ 494 (501)
T PLN02766 415 EAIKKANNTKYGLAAGIVTKDLDVANTVSRSIRAGTIWVNCYFAFDPDCPFGGYKMSGFGRDQGMDALDKYLQVKSVVTP 494 (501)
T ss_pred HHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCcCCccchHHHHHHHhceEEEEEe
Confidence 99999999999999999999999999999999999999997532 89999999999999999999999999999887
Q ss_pred cCCCC
Q 001665 671 WNDLP 675 (1035)
Q Consensus 671 ~~~~~ 675 (1035)
+...|
T Consensus 495 ~~~~~ 499 (501)
T PLN02766 495 LYNSP 499 (501)
T ss_pred ccccc
Confidence 65544
|
|
| >PLN02278 succinic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-89 Score=813.68 Aligned_cols=473 Identities=30% Similarity=0.472 Sum_probs=443.0
Q ss_pred CCCCCCCccceEEcCEEecCCCCCeEEeecCCCCCeEEEecCCCHHHHHHHHHHHHHhhHhhhCCCHHHHHHHHHHHHHH
Q 001665 194 SPNIDNNRVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQEL 273 (1035)
Q Consensus 194 ~~~~~~~~~~~~I~G~~~~~~~~~~~~v~nP~tGevi~~v~~~s~~dv~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~ 273 (1035)
+.+..+...++||||+|+.+.++..++++||+||+++++++.++.+|++++|++|++||+.|+.++.++|.++|++++++
T Consensus 17 ~~~~~~~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~ 96 (498)
T PLN02278 17 LRNAGLLRTQGLIGGKWTDAYDGKTFPVYNPATGEVIANVPCMGRAETNDAIASAHDAFPSWSKLTASERSKILRRWYDL 96 (498)
T ss_pred hhcCCCCcccceECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 44556777889999999986567889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCccccCCCCCCcceeeeccceeEEEECCCCcchhc
Q 001665 274 IRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMT 353 (1035)
Q Consensus 274 L~~~~e~La~~i~~etGk~~~eA~~EV~~a~~~l~~~~~~a~~~~g~~~~~~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~ 353 (1035)
|+++.++|++++++|+||+..+++.|+..+++.+++++..+....+...+....+...+++++|+|||++|+|||||+.+
T Consensus 97 l~~~~~~la~~~~~e~Gk~~~~a~~Ev~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~GvV~~I~PwN~P~~~ 176 (498)
T PLN02278 97 IIANKEDLAQLMTLEQGKPLKEAIGEVAYGASFLEYFAEEAKRVYGDIIPSPFPDRRLLVLKQPVGVVGAITPWNFPLAM 176 (498)
T ss_pred HHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEeecccEEEEECCCccHHHH
Confidence 99999999999999999999999999999999999999877665554333222344557789999999999999999999
Q ss_pred hHHHHHHHHhcCCEEEEeCCCCChhHHHHHHHHHHHhCCCCCcEEEeecch-hhHhhhhcCCCccEEEEeccchHHHHHH
Q 001665 354 PLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGTN-DVINHICDDEDIKAISFVASSTASVQMY 432 (1035)
Q Consensus 354 ~~~~l~~ALaaGNaVVlKPS~~ap~ta~~L~ell~eAGlP~gvv~vV~g~~-e~~~~L~~h~~vd~V~fTGS~~vG~~I~ 432 (1035)
+++++++||++||+||+|||+.+|.++..|+++|.++|+|+|+||+|+|+. +.+..|+.|++|++|+||||+.+|+.|+
T Consensus 177 ~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~l~eaglP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~ 256 (498)
T PLN02278 177 ITRKVGPALAAGCTVVVKPSELTPLTALAAAELALQAGIPPGVLNVVMGDAPEIGDALLASPKVRKITFTGSTAVGKKLM 256 (498)
T ss_pred HHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCCCcccEEEEecCChhhHHHHhcCCCcCEEEEECcHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999855 6788999999999999999999999999
Q ss_pred HHHHhcCCceeecCCCcceEEEcCCCCHHHHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHhcccccCC
Q 001665 433 ARAAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGT 511 (1035)
Q Consensus 433 ~aAa~~l~Pv~lElGGknp~IV~~dADld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~ 511 (1035)
+.|+++++|+++|+|||||+||++|||++.|++.|++++|+|+||.|+++++|||+++++ +|+++|+++++++++|+|.
T Consensus 257 ~~aa~~~~~~~lElGGk~~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~L~~~~~~l~~G~p~ 336 (498)
T PLN02278 257 AGAAATVKRVSLELGGNAPFIVFDDADLDVAVKGALASKFRNSGQTCVCANRILVQEGIYDKFAEAFSKAVQKLVVGDGF 336 (498)
T ss_pred HHHhhcCCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHhccCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999998 9999999999999999999
Q ss_pred CCCCCcCCCcCHHHHHHHHHHHHHHHHCCCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecC
Q 001665 512 DASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQAD 591 (1035)
Q Consensus 512 d~~~~~Gpli~~~~~~rl~~~i~~av~~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~ 591 (1035)
++++++||++++.+++++.++|++++++||++++||... ..+|.|++||||.+++++|++++||+|||||+|++|+
T Consensus 337 ~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~----~~~g~~~~Ptvl~~v~~~~~~~~~E~FGPVl~v~~~~ 412 (498)
T PLN02278 337 EEGVTQGPLINEAAVQKVESHVQDAVSKGAKVLLGGKRH----SLGGTFYEPTVLGDVTEDMLIFREEVFGPVAPLTRFK 412 (498)
T ss_pred CCCCcCCCccCHHHHHHHHHHHHHHHhCCCEEEeCCccC----CCCCceEeeEEEecCCCCChhhhCCCcCCEEEEEeeC
Confidence 999999999999999999999999999999999998642 1358999999999999999999999999999999999
Q ss_pred CHHHHHHHHHhcCCCcEEEEEcCCHHHHHHHHhccceeEEEEcCCcC----CCCCCCCCCCCCCcCcHHHHHhcceeeEE
Q 001665 592 SLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPVP----SSFSSINESGEFNFCGKSGVQFYTQIKTV 667 (1035)
Q Consensus 592 d~eeAI~laN~~~~GLsasVfS~d~~~a~~~a~~l~sG~V~IN~~~~----~PfGG~g~SG~G~~~G~~g~~~ft~~k~v 667 (1035)
|+||||+++|+++|||+++|||+|.+.++++++++++|.|+||+... +||||+|.||+|+++|.+|+++|++.|+|
T Consensus 413 ~~deai~~~N~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~i 492 (498)
T PLN02278 413 TEEEAIAIANDTEAGLAAYIFTRDLQRAWRVSEALEYGIVGVNEGLISTEVAPFGGVKQSGLGREGSKYGIDEYLEIKYV 492 (498)
T ss_pred CHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCcCCcccCcCCccchHHHHHHhheeEEE
Confidence 99999999999999999999999999999999999999999998532 79999999999999999999999999998
Q ss_pred EEe
Q 001665 668 AQQ 670 (1035)
Q Consensus 668 ~~~ 670 (1035)
...
T Consensus 493 ~~~ 495 (498)
T PLN02278 493 CLG 495 (498)
T ss_pred EEe
Confidence 753
|
|
| >PRK13252 betaine aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-89 Score=811.51 Aligned_cols=471 Identities=32% Similarity=0.488 Sum_probs=441.0
Q ss_pred CccceEEcCEEecCCCCCeEEeecCCCCCeEEEecCCCHHHHHHHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHHhHH
Q 001665 200 NRVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDID 279 (1035)
Q Consensus 200 ~~~~~~I~G~~~~~~~~~~~~v~nP~tGevi~~v~~~s~~dv~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e 279 (1035)
..+++||||+|+.+.++..++++||+||+++++++.++.+|+++++++|++||+.|+.++.++|.++|++++++|+++++
T Consensus 5 ~~~~~~I~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 84 (488)
T PRK13252 5 PLQSLYIDGAYVEATSGETFEVINPATGEVLATVQAATPADVEAAVASAKQGQKIWAAMTAMERSRILRRAVDILRERND 84 (488)
T ss_pred ccccccCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHH
Confidence 45678999999977667899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHhhcCccccCCCCCCcceeeeccceeEEEECCCCcchhchHHHH
Q 001665 280 KLAMNITVEQGTTLKAAQ-RDVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMF 358 (1035)
Q Consensus 280 ~La~~i~~etGk~~~eA~-~EV~~a~~~l~~~~~~a~~~~g~~~~~~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l 358 (1035)
+|++++++|+||++.+++ .|+..+++.++++++.+....+...... .+...+++++|+|||++|+|||||+.++++++
T Consensus 85 ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~g~~~~~~-~~~~~~~~~~PlGVv~~I~p~N~P~~~~~~~~ 163 (488)
T PRK13252 85 ELAALETLDTGKPIQETSVVDIVTGADVLEYYAGLAPALEGEQIPLR-GGSFVYTRREPLGVCAGIGAWNYPIQIACWKS 163 (488)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccC-CCceEEEEEeeeeEEEEECCCchHHHHHHHHH
Confidence 999999999999999997 4999999999999987766555433221 24456788999999999999999999999999
Q ss_pred HHHHhcCCEEEEeCCCCChhHHHHHHHHHHHhCCCCCcEEEeecchhhHhhhhcCCCccEEEEeccchHHHHHHHHHHhc
Q 001665 359 SIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAAR 438 (1035)
Q Consensus 359 ~~ALaaGNaVVlKPS~~ap~ta~~L~ell~eAGlP~gvv~vV~g~~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~ 438 (1035)
++||++||+||+|||+.+|.++.+|+++|.++|+|+|+||+|+|+.+.+..|+.|+++|+|+||||+.+|+.|+++++++
T Consensus 164 ~~ALaaGN~Vv~Kps~~~p~t~~~l~~~~~~aglP~g~v~~v~g~~~~~~~L~~~~~vd~V~fTGS~~~g~~i~~~aa~~ 243 (488)
T PRK13252 164 APALAAGNAMIFKPSEVTPLTALKLAEIYTEAGLPDGVFNVVQGDGRVGAWLTEHPDIAKVSFTGGVPTGKKVMAAAAAS 243 (488)
T ss_pred HHHHhcCCeEEEeCCccCcHHHHHHHHHHHHcCcCcccEEEEecCcHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999999998767888999999999999999999999999999999
Q ss_pred CCceeecCCCcceEEEcCCCCHHHHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHhcccccCCCCCCCc
Q 001665 439 GKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDASADV 517 (1035)
Q Consensus 439 l~Pv~lElGGknp~IV~~dADld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d~~~~~ 517 (1035)
++|+++|+|||||+||++|||++.|++.+++++|+|+||.|+++++||||++++ +|+++|+++++++++|+|.++++++
T Consensus 244 l~~~~lElgG~~p~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~ 323 (488)
T PRK13252 244 LKEVTMELGGKSPLIVFDDADLDRAADIAMLANFYSSGQVCTNGTRVFVQKSIKAAFEARLLERVERIRIGDPMDPATNF 323 (488)
T ss_pred CCcEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCcc
Confidence 999999999999999999999999999999999999999999999999999998 9999999999999999999999999
Q ss_pred CCCcCHHHHHHHHHHHHHHHHCCCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecCCHHHHH
Q 001665 518 GPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAI 597 (1035)
Q Consensus 518 Gpli~~~~~~rl~~~i~~av~~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI 597 (1035)
|||+++.++++++++|++++++|+++++||..........|+|++|||+.++++++++++||+||||++|++|+|++|||
T Consensus 324 gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~~eai 403 (488)
T PRK13252 324 GPLVSFAHRDKVLGYIEKGKAEGARLLCGGERLTEGGFANGAFVAPTVFTDCTDDMTIVREEIFGPVMSVLTFDDEDEVI 403 (488)
T ss_pred cccCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCeEEccEEeccCCCCChHhhCCCCCceEEEEeeCCHHHHH
Confidence 99999999999999999999999999999964322222468999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCcEEEEEcCCHHHHHHHHhccceeEEEEcCCc----CCCCCCCCCCCCCCcCcHHHHHhcceeeEEEEec
Q 001665 598 KMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPV----PSSFSSINESGEFNFCGKSGVQFYTQIKTVAQQW 671 (1035)
Q Consensus 598 ~laN~~~~GLsasVfS~d~~~a~~~a~~l~sG~V~IN~~~----~~PfGG~g~SG~G~~~G~~g~~~ft~~k~v~~~~ 671 (1035)
+++|+++|||++||||+|.+++.+++.++++|.|+||+.. .+||||+|.||+|+++|++|+++||+.|+|+..+
T Consensus 404 ~~~n~~~~gL~a~I~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~i~~~~ 481 (488)
T PRK13252 404 ARANDTEYGLAAGVFTADLSRAHRVIHQLEAGICWINTWGESPAEMPVGGYKQSGIGRENGIATLEHYTQIKSVQVEM 481 (488)
T ss_pred HHHhCCCCCCeEEEEeCCHHHHHHHHHhcCccEEEECCCCCCCCCCCCCCCccCcCCcCChHHHHHHhcceEEEEEeC
Confidence 9999999999999999999999999999999999999852 2899999999999999999999999999998764
|
|
| >cd07085 ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-89 Score=808.76 Aligned_cols=470 Identities=56% Similarity=0.918 Sum_probs=440.8
Q ss_pred cceEEcCEEecCCCCCeEEeecCCCCCeEEEecCCCHHHHHHHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHHhHHHH
Q 001665 202 VSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKL 281 (1035)
Q Consensus 202 ~~~~I~G~~~~~~~~~~~~v~nP~tGevi~~v~~~s~~dv~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e~L 281 (1035)
+++||||+|+.+.++..++++||+||+++++++.++.+|+++++++|++||+.|+.++.++|.++|++++++|+++.++|
T Consensus 1 ~~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 80 (478)
T cd07085 1 LKLFINGEWVESKTTEWLDVYNPATGEVIARVPLATAEEVDAAVAAAKAAFPAWSATPVLKRQQVMFKFRQLLEENLDEL 80 (478)
T ss_pred CCceECCEEecCCCCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 35799999998766678999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCccccCCCCCCcceeeeccceeEEEECCCCcchhchHHHHHHH
Q 001665 282 AMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIA 361 (1035)
Q Consensus 282 a~~i~~etGk~~~eA~~EV~~a~~~l~~~~~~a~~~~g~~~~~~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~A 361 (1035)
+++++.|+||++.+++.|+..+++.+++++.......++.......+...+.+++|+|||++|+|||||+.++++++++|
T Consensus 81 ~~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~A 160 (478)
T cd07085 81 ARLITLEHGKTLADARGDVLRGLEVVEFACSIPHLLKGEYLENVARGIDTYSYRQPLGVVAGITPFNFPAMIPLWMFPMA 160 (478)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeecccCCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHH
Confidence 99999999999999999999999999999887766666544322234456889999999999999999999999999999
Q ss_pred HhcCCEEEEeCCCCChhHHHHHHHHHHHhCCCCCcEEEeecchhhHhhhhcCCCccEEEEeccchHHHHHHHHHHhcCCc
Q 001665 362 VTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAARGKR 441 (1035)
Q Consensus 362 LaaGNaVVlKPS~~ap~ta~~L~ell~eAGlP~gvv~vV~g~~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~l~P 441 (1035)
|++||+||+|||+.+|+++..|+++|.++|+|+|+||+|+|+.+.+..|+.|++|++|+||||+.+|+.|+++|+++++|
T Consensus 161 LaaGN~VvlKps~~tp~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~ 240 (478)
T cd07085 161 IACGNTFVLKPSERVPGAAMRLAELLQEAGLPDGVLNVVHGGKEAVNALLDHPDIKAVSFVGSTPVGEYIYERAAANGKR 240 (478)
T ss_pred HhcCCEEEEECCCcCcHHHHHHHHHHHHhCCCCCcEEEEecCHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhhcCCc
Confidence 99999999999999999999999999999999999999999778889999999999999999999999999999999999
Q ss_pred eeecCCCcceEEEcCCCCHHHHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHhcccccCCCCCCCcCCC
Q 001665 442 VQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDASADVGPV 520 (1035)
Q Consensus 442 v~lElGGknp~IV~~dADld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d~~~~~Gpl 520 (1035)
+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++|||+++++ +|+++|+++++++++|+|.++++++||+
T Consensus 241 ~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~L~~~~~~l~~G~p~~~~~~~gpl 320 (478)
T cd07085 241 VQALGGAKNHAVVMPDADLEQTANALVGAAFGAAGQRCMALSVAVAVGDEADEWIPKLVERAKKLKVGAGDDPGADMGPV 320 (478)
T ss_pred EEecCCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCC
Confidence 999999999999999999999999999999999999999999999999988 9999999999999999999999999999
Q ss_pred cCHHHHHHHHHHHHHHHHCCCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecCCHHHHHHHH
Q 001665 521 VSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMV 600 (1035)
Q Consensus 521 i~~~~~~rl~~~i~~av~~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI~la 600 (1035)
+++.+++++.++|++++++||++++||.....++..+|+|++||||.++++++.+++||+||||++|++|+|+||||+++
T Consensus 321 i~~~~~~~v~~~i~~a~~~Ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~ 400 (478)
T cd07085 321 ISPAAKERIEGLIESGVEEGAKLVLDGRGVKVPGYENGNFVGPTILDNVTPDMKIYKEEIFGPVLSIVRVDTLDEAIAII 400 (478)
T ss_pred cCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCcCCCCeEEcCEEEecCCCCChhhhCcCcCCeEEEEEeCCHHHHHHHH
Confidence 99999999999999999999999999975433333468999999999999999999999999999999999999999999
Q ss_pred HhcCCCcEEEEEcCCHHHHHHHHhccceeEEEEcCCc----C-CCCCCCCCCCCCC--cCcHHHHHhcceeeEEEEec
Q 001665 601 NRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPV----P-SSFSSINESGEFN--FCGKSGVQFYTQIKTVAQQW 671 (1035)
Q Consensus 601 N~~~~GLsasVfS~d~~~a~~~a~~l~sG~V~IN~~~----~-~PfGG~g~SG~G~--~~G~~g~~~ft~~k~v~~~~ 671 (1035)
|+++|||++||||+|.++++++++++++|.|+||+.. . +||||+|.||+|+ ++|++|+++|++.|+++..|
T Consensus 401 N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfgG~k~SG~G~~~~~g~~~~~~~~~~k~v~~~~ 478 (478)
T cd07085 401 NANPYGNGAAIFTRSGAAARKFQREVDAGMVGINVPIPVPLAFFSFGGWKGSFFGDLHFYGKDGVRFYTQTKTVTSRW 478 (478)
T ss_pred hCCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCCCcccccCCCCcCChHHHHHHhcceEEEEEeC
Confidence 9999999999999999999999999999999999862 1 7999999999994 68999999999999997653
|
Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. |
| >TIGR03374 ABALDH 1-pyrroline dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-89 Score=805.21 Aligned_cols=462 Identities=26% Similarity=0.375 Sum_probs=432.5
Q ss_pred cceEEcCEEecCCCCCeEEeecCCCCCeEEEecCCCHHHHHHHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHHhHHHH
Q 001665 202 VSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKL 281 (1035)
Q Consensus 202 ~~~~I~G~~~~~~~~~~~~v~nP~tGevi~~v~~~s~~dv~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e~L 281 (1035)
+++||||+|+.+ ++..++++||+||+++++++.++.+|++++++.|++||+.|+.++.++|.++|++++++|++++++|
T Consensus 2 ~~~~i~g~~~~~-~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 80 (472)
T TIGR03374 2 HKLLINGELVSG-EGEKQPVYNPATGEVILEIAEASAEQVDAAVRAADAAFAEWGQTTPKARAECLLKLADVIEENAQVF 80 (472)
T ss_pred CCceECCEEecC-CCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 468999999975 4678999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHhhcCccccCCCCCCcceeeeccceeEEEECCCCcchhchHHHHHH
Q 001665 282 AMNITVEQGTTLKAAQ-RDVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSI 360 (1035)
Q Consensus 282 a~~i~~etGk~~~eA~-~EV~~a~~~l~~~~~~a~~~~g~~~~~~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~ 360 (1035)
++++++|+||++.+++ .|+..+++.+++++..+....+...+....+...++.++|+|||++|+|||||+.++++++++
T Consensus 81 a~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ 160 (472)
T TIGR03374 81 AELESRNCGKPLHSVFNDEIPAIVDVFRFFAGAARCLSGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAP 160 (472)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCccCCCceEEEEEecceEEEEECCCCchHHHHHHHHHH
Confidence 9999999999999986 499999999999988776655432222123445678999999999999999999999999999
Q ss_pred HHhcCCEEEEeCCCCChhHHHHHHHHHHHhCCCCCcEEEeec-chhhHhhhhcCCCccEEEEeccchHHHHHHHHHHhcC
Q 001665 361 AVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHG-TNDVINHICDDEDIKAISFVASSTASVQMYARAAARG 439 (1035)
Q Consensus 361 ALaaGNaVVlKPS~~ap~ta~~L~ell~eAGlP~gvv~vV~g-~~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~l 439 (1035)
||++||+||+|||+.+|.++..+++++.++ ||+|++|+|+| +.+.+..|+.|++||+|+||||+.+|+.|++++++++
T Consensus 161 ALaaGN~VV~KPs~~tp~~~~~l~~l~~~~-lP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~ 239 (472)
T TIGR03374 161 ALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHEKVRMVSLTGSIATGEHILSHTAPSI 239 (472)
T ss_pred HHhcCCEEEecCCCCCCHHHHHHHHHHHHh-CCcCeEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhhcc
Confidence 999999999999999999999999999885 99999999999 4578899999999999999999999999999999999
Q ss_pred CceeecCCCcceEEEcCCCCHHHHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHhcccccCCCCCCCcC
Q 001665 440 KRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDASADVG 518 (1035)
Q Consensus 440 ~Pv~lElGGknp~IV~~dADld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d~~~~~G 518 (1035)
+|+++|||||||+||++|||++.||+.+++++|+|+||.|+++++|||+++++ +|+++|+++++++++|+|.++++++|
T Consensus 240 ~~~~lElGGk~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~l~~G~p~~~~~~~G 319 (472)
T TIGR03374 240 KRTHMELGGKAPVIVFDDADIDAVVEGVRTFGFYNAGQDCTAACRIYAQRGIYDTLVEKLGAAVATLKSGAPDDESTELG 319 (472)
T ss_pred cceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCccccCCEEEEcHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCC
Confidence 99999999999999999999999999999999999999999999999999998 99999999999999999999999999
Q ss_pred CCcCHHHHHHHHHHHHHHHHCC-CcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecCCHHHHH
Q 001665 519 PVVSVEVKDQISRLIQNAVDNG-ASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAI 597 (1035)
Q Consensus 519 pli~~~~~~rl~~~i~~av~~G-Akvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI 597 (1035)
||+++.+++++.++|++++++| +++++||... ...|+|++|||+.+++++|.+++||+||||++|++|+|+||||
T Consensus 320 pli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~~----~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai 395 (472)
T TIGR03374 320 PLSSLAHLERVMKAVEEAKALGHIKVITGGEKR----KGNGYYFAPTLLAGAKQDDAIVQKEVFGPVVSITSFDDEEQVV 395 (472)
T ss_pred CCCCHHHHHHHHHHHHHHHHcCCeEEEeCCccC----CCCCeEEeeEEEeCCCCCChhhhCCccCceEEEEEECCHHHHH
Confidence 9999999999999999999999 7999998642 2358999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCcEEEEEcCCHHHHHHHHhccceeEEEEcCCcC----CCCCCCCCCCCCCcCcHHHHHhcceeeEEEE
Q 001665 598 KMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPVP----SSFSSINESGEFNFCGKSGVQFYTQIKTVAQ 669 (1035)
Q Consensus 598 ~laN~~~~GLsasVfS~d~~~a~~~a~~l~sG~V~IN~~~~----~PfGG~g~SG~G~~~G~~g~~~ft~~k~v~~ 669 (1035)
+++|+++|||++||||+|..++.++++++++|.|+||+... +||||+|.||+|+++|++|+++||+.|+++.
T Consensus 396 ~~an~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~i~~ 471 (472)
T TIGR03374 396 NWANDSQYGLASSVWTKDVGRAHRLSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHIMV 471 (472)
T ss_pred HHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccCccCccchHHHHHHhhceEEEEE
Confidence 99999999999999999999999999999999999998632 8999999999999999999999999999864
|
Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. |
| >cd07113 ALDH_PADH_NahF Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-88 Score=804.78 Aligned_cols=464 Identities=30% Similarity=0.445 Sum_probs=434.2
Q ss_pred ceEEcCEEecCCCCCeEEeecCCCCCeEEEecCCCHHHHHHHHHHHHHhhHh-hhCCCHHHHHHHHHHHHHHHHHhHHHH
Q 001665 203 SNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPA-WKNTPVATRQRIMFKLQELIRRDIDKL 281 (1035)
Q Consensus 203 ~~~I~G~~~~~~~~~~~~v~nP~tGevi~~v~~~s~~dv~~av~~Ar~A~~~-W~~~s~~~R~~iL~~la~~L~~~~e~L 281 (1035)
++||||+|+.+.++..++++||+||+++++++.++.+|+++++++|++||+. |+.++.++|.++|++++++|++++++|
T Consensus 1 ~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 80 (477)
T cd07113 1 GHFIDGRPVAGQSEKRLDITNPATEQVIASVASATEADVDAAVASAWRAFVSAWAKTTPAERGRILLRLADLIEQHGEEL 80 (477)
T ss_pred CCeECCEEecCCCCCeEeeeCCCCCCEEEEEcCCCHHHHHHHHHHHHHHhHhhhccCCHHHHHHHHHHHHHHHHHCHHHH
Confidence 3699999998766678999999999999999999999999999999999985 999999999999999999999999999
Q ss_pred HHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHhhcCccccCCC-----CCCcceeeeccceeEEEECCCCcchhchH
Q 001665 282 AMNITVEQGTTLKAAQR-DVLFGLEVVEQACAVATLQIGEFVPNAL-----CGLDTYCFREPLGVCAGICPFNFPDMTPL 355 (1035)
Q Consensus 282 a~~i~~etGk~~~eA~~-EV~~a~~~l~~~~~~a~~~~g~~~~~~~-----~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~ 355 (1035)
++++++|+||+..+++. |+..+++.++++++++....+....... .+...+++++|+|||++|+|||||+.+.+
T Consensus 81 a~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~ 160 (477)
T cd07113 81 AQLETLCSGKSIHLSRAFEVGQSANFLRYFAGWATKINGETLAPSIPSMQGERYTAFTRREPVGVVAGIVPWNFSVMIAV 160 (477)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccccCCCceEEEEEeecceEEEEcCCChHHHHHH
Confidence 99999999999999985 9999999999998877655444322111 12345788999999999999999999999
Q ss_pred HHHHHHHhcCCEEEEeCCCCChhHHHHHHHHHHHhCCCCCcEEEeecchhhHhhhhcCCCccEEEEeccchHHHHHHHHH
Q 001665 356 WMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYARA 435 (1035)
Q Consensus 356 ~~l~~ALaaGNaVVlKPS~~ap~ta~~L~ell~eAGlP~gvv~vV~g~~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aA 435 (1035)
+++++||++||+||+|||+.+|.++.+|++++.++|+|+|+||+|+|+.+.+..|+.|++||+|+||||+.+|+.|++.+
T Consensus 161 ~~i~~ALaaGN~VvlKPs~~tp~~~~~l~~~~~~aglP~gvv~~v~g~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~a 240 (477)
T cd07113 161 WKIGAALATGCTIVIKPSEFTPLTLLRVAELAKEAGIPDGVLNVVNGKGAVGAQLISHPDVAKVSFTGSVATGKKIGRQA 240 (477)
T ss_pred HHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHcCcCCCcEEEEecCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998666888999999999999999999999999999
Q ss_pred HhcCCceeecCCCcceEEEcCCCCHHHHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHhcccccCCCCC
Q 001665 436 AARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDAS 514 (1035)
Q Consensus 436 a~~l~Pv~lElGGknp~IV~~dADld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d~~ 514 (1035)
+++++|+++|+|||||+||++|||++.|++.|++++|+|+||.|+++++||||++++ +|+++|+++++++++|+|.+++
T Consensus 241 a~~~~~~~lElGGkn~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 320 (477)
T cd07113 241 ASDLTRVTLELGGKNAAAFLKDADIDWVVEGLLTAGFLHQGQVCAAPERFYVHRSKFDELVTKLKQALSSFQVGSPMDES 320 (477)
T ss_pred HhhcCceEeecCCCCeeEECCCCCHHHHHHHHHHHHHhhCCCCCcCCcEEEECHHHHHHHHHHHHHHHHhCCCCCCCCCC
Confidence 999999999999999999999999999999999999999999999999999999998 9999999999999999999999
Q ss_pred CCcCCCcCHHHHHHHHHHHHHHHHCCCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecCCHH
Q 001665 515 ADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLE 594 (1035)
Q Consensus 515 ~~~Gpli~~~~~~rl~~~i~~av~~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~e 594 (1035)
+++|||+++.+++++.++|++++++|+++++||... ...|+|++|||+.+++++|.+++||+||||++|++|+|+|
T Consensus 321 ~~~gpli~~~~~~~~~~~i~~a~~~Ga~~l~gg~~~----~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~d 396 (477)
T cd07113 321 VMFGPLANQPHFDKVCSYLDDARAEGDEIVRGGEAL----AGEGYFVQPTLVLARSADSRLMREETFGPVVSFVPYEDEE 396 (477)
T ss_pred CCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCC----CCCCeeEeCEEEecCCCCChHHhCCCCCCeEEEEEeCCHH
Confidence 999999999999999999999999999999998642 1358999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCcEEEEEcCCHHHHHHHHhccceeEEEEcCCcC----CCCCCCCCCCCCCcCcHHHHHhcceeeEEEEe
Q 001665 595 EAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPVP----SSFSSINESGEFNFCGKSGVQFYTQIKTVAQQ 670 (1035)
Q Consensus 595 eAI~laN~~~~GLsasVfS~d~~~a~~~a~~l~sG~V~IN~~~~----~PfGG~g~SG~G~~~G~~g~~~ft~~k~v~~~ 670 (1035)
|||+++|+++|||++||||+|.+.+.+++.++++|+|+||.... +||||+|.||+|+++|.+++++||+.|+|...
T Consensus 397 eai~~~n~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~ 476 (477)
T cd07113 397 ELIQLINDTPFGLTASVWTNNLSKALRYIPRIEAGTVWVNMHTFLDPAVPFGGMKQSGIGREFGSAFIDDYTELKSVMIR 476 (477)
T ss_pred HHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccCCccchHHHHHHhhceEEEEEe
Confidence 99999999999999999999999999999999999999997632 89999999999999999999999999998764
|
NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. |
| >PLN02466 aldehyde dehydrogenase family 2 member | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-88 Score=809.85 Aligned_cols=469 Identities=27% Similarity=0.386 Sum_probs=437.8
Q ss_pred CccceEEcCEEecCCCCCeEEeecCCCCCeEEEecCCCHHHHHHHHHHHHHhhH--hhhCCCHHHHHHHHHHHHHHHHHh
Q 001665 200 NRVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFP--AWKNTPVATRQRIMFKLQELIRRD 277 (1035)
Q Consensus 200 ~~~~~~I~G~~~~~~~~~~~~v~nP~tGevi~~v~~~s~~dv~~av~~Ar~A~~--~W~~~s~~~R~~iL~~la~~L~~~ 277 (1035)
..+++||||+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++||+ .|+.++.++|.++|++++++|+++
T Consensus 56 ~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~Av~aA~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 135 (538)
T PLN02466 56 SYTQLLINGQFVDAASGKTFPTLDPRTGEVIAHVAEGDAEDVNRAVAAARKAFDEGPWPKMTAYERSRILLRFADLLEKH 135 (538)
T ss_pred ccccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCcCccccCCHHHHHHHHHHHHHHHHHh
Confidence 344689999999876778999999999999999999999999999999999998 499999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHhhcCccccCCCCCCcceeeeccceeEEEECCCCcchhchHH
Q 001665 278 IDKLAMNITVEQGTTLKAAQ-RDVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLW 356 (1035)
Q Consensus 278 ~e~La~~i~~etGk~~~eA~-~EV~~a~~~l~~~~~~a~~~~g~~~~~~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~ 356 (1035)
.++|++++++|+||++.+++ .|+..+++.+++++.++....+...+.. .+...+++++|+|||++|+|||||+.++++
T Consensus 136 ~~ela~~~~~e~GK~~~~a~~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~-~~~~~~~~~~P~GVV~~I~PwN~P~~l~~~ 214 (538)
T PLN02466 136 NDELAALETWDNGKPYEQSAKAELPMFARLFRYYAGWADKIHGLTVPAD-GPHHVQTLHEPIGVAGQIIPWNFPLLMFAW 214 (538)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccC-CCceEEEEEecceEEEEECCCchHHHHHHH
Confidence 99999999999999999996 5999999999999887766655443321 233457889999999999999999999999
Q ss_pred HHHHHHhcCCEEEEeCCCCChhHHHHHHHHHHHhCCCCCcEEEeecc-hhhHhhhhcCCCccEEEEeccchHHHHHHHHH
Q 001665 357 MFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGT-NDVINHICDDEDIKAISFVASSTASVQMYARA 435 (1035)
Q Consensus 357 ~l~~ALaaGNaVVlKPS~~ap~ta~~L~ell~eAGlP~gvv~vV~g~-~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aA 435 (1035)
++++||++||+||+|||+.+|.++.+|+++|.++|+|+|+||+|+|+ .+.+..|+.|++||+|+||||+.+|+.|++.|
T Consensus 215 ~i~pALaaGN~VVlKPs~~tp~~~~~l~~ll~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~FTGS~~~G~~v~~~a 294 (538)
T PLN02466 215 KVGPALACGNTIVLKTAEQTPLSALYAAKLLHEAGLPPGVLNVVSGFGPTAGAALASHMDVDKLAFTGSTDTGKIVLELA 294 (538)
T ss_pred HHhHHHHcCCEEEeECCCCCcHHHHHHHHHHHhcCCCcccEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999995 46788999999999999999999999999999
Q ss_pred Hh-cCCceeecCCCcceEEEcCCCCHHHHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHhcccccCCCC
Q 001665 436 AA-RGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDA 513 (1035)
Q Consensus 436 a~-~l~Pv~lElGGknp~IV~~dADld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d~ 513 (1035)
+. +++|+++|||||||+||++|||++.|++.+++++|+|+||.|+++++|||+++++ +|+++|++++.++++|+|.++
T Consensus 295 a~~~l~pv~lElGGknp~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vG~p~~~ 374 (538)
T PLN02466 295 AKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHERVYDEFVEKAKARALKRVVGDPFKK 374 (538)
T ss_pred HhcCCCcEEEEcCCCCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCcCcEEEEcHHHHHHHHHHHHHHHHhccCCCCccC
Confidence 84 8999999999999999999999999999999999999999999999999999998 899999999999999999999
Q ss_pred CCCcCCCcCHHHHHHHHHHHHHHHHCCCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecCCH
Q 001665 514 SADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSL 593 (1035)
Q Consensus 514 ~~~~Gpli~~~~~~rl~~~i~~av~~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~ 593 (1035)
++++||++++.+++++.++|++++++||++++||... ...|+|++|||+.+++++|.+++||+||||++|++|+|+
T Consensus 375 ~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~----~~~g~~i~Ptvl~~v~~d~~i~~eE~FGPVl~v~~~~d~ 450 (538)
T PLN02466 375 GVEQGPQIDSEQFEKILRYIKSGVESGATLECGGDRF----GSKGYYIQPTVFSNVQDDMLIAQDEIFGPVQSILKFKDL 450 (538)
T ss_pred CCCCccCCCHHHHHHHHHHHHHHHHCCCEEEecCCcC----CCCceEEEEEEEecCCCCCchhcCCccCcEEEEEEeCCH
Confidence 9999999999999999999999999999999998742 236899999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCcEEEEEcCCHHHHHHHHhccceeEEEEcCCcC----CCCCCCCCCCCCCcCcHHHHHhcceeeEEEE
Q 001665 594 EEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPVP----SSFSSINESGEFNFCGKSGVQFYTQIKTVAQ 669 (1035)
Q Consensus 594 eeAI~laN~~~~GLsasVfS~d~~~a~~~a~~l~sG~V~IN~~~~----~PfGG~g~SG~G~~~G~~g~~~ft~~k~v~~ 669 (1035)
||||+++|+++|||+++|||+|.+.+.++++++++|.|+||.... +||||+|.||+|+++|.+|+++|++.|+++.
T Consensus 451 deAi~~aN~~~~GL~a~VfT~d~~~a~~~~~~l~aG~v~IN~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~ft~~k~v~~ 530 (538)
T PLN02466 451 DEVIRRANNTRYGLAAGVFTQNLDTANTLSRALRVGTVWVNCFDVFDAAIPFGGYKMSGIGREKGIYSLNNYLQVKAVVT 530 (538)
T ss_pred HHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCcCCCCcCccCcccHHHHHHHhcceEEEEE
Confidence 999999999999999999999999999999999999999997532 8999999999999999999999999999988
Q ss_pred ecCC
Q 001665 670 QWND 673 (1035)
Q Consensus 670 ~~~~ 673 (1035)
.+..
T Consensus 531 ~~~~ 534 (538)
T PLN02466 531 PLKN 534 (538)
T ss_pred eCCC
Confidence 6544
|
|
| >cd07140 ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-88 Score=803.57 Aligned_cols=464 Identities=29% Similarity=0.446 Sum_probs=434.1
Q ss_pred cceEEcCEEecCCCCCeEEeecCCCCCeEEEecCCCHHHHHHHHHHHHHhhH--hhhCCCHHHHHHHHHHHHHHHHHhHH
Q 001665 202 VSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFP--AWKNTPVATRQRIMFKLQELIRRDID 279 (1035)
Q Consensus 202 ~~~~I~G~~~~~~~~~~~~v~nP~tGevi~~v~~~s~~dv~~av~~Ar~A~~--~W~~~s~~~R~~iL~~la~~L~~~~e 279 (1035)
+++||||+|+.+.++..++++||+||+++++++.++.+|+++|+++|++||+ .|+.++.++|.++|++++++|+++.+
T Consensus 6 ~~~~I~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ 85 (486)
T cd07140 6 HQLFINGEFVDAEGGKTYNTINPTDGSVICKVSLATVEDVDRAVAAAKEAFENGEWGKMNARDRGRLMYRLADLMEEHQE 85 (486)
T ss_pred cCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCchhcCCHHHHHHHHHHHHHHHHHhHH
Confidence 4689999999876678899999999999999999999999999999999998 59999999999999999999999999
Q ss_pred HHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHhhcCccccCCC--CC-CcceeeeccceeEEEECCCCcchhchH
Q 001665 280 KLAMNITVEQGTTLKAAQ-RDVLFGLEVVEQACAVATLQIGEFVPNAL--CG-LDTYCFREPLGVCAGICPFNFPDMTPL 355 (1035)
Q Consensus 280 ~La~~i~~etGk~~~eA~-~EV~~a~~~l~~~~~~a~~~~g~~~~~~~--~g-~~~~~~~ePlGVV~iI~P~N~Pl~~~~ 355 (1035)
+|++++++|+||++.++. .|+..+++.+++++.++....+...+... .+ ...+++++|+|||++|+|||||+.+++
T Consensus 86 ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~r~P~GVv~~I~PwN~P~~~~~ 165 (486)
T cd07140 86 ELATIESLDSGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGKTIPINQARPNRNLTLTKREPIGVCGIVIPWNYPLMMLA 165 (486)
T ss_pred HHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEEEeeccceEEEEcCCchHHHHHH
Confidence 999999999999999996 69999999999999877666554332211 12 235678999999999999999999999
Q ss_pred HHHHHHHhcCCEEEEeCCCCChhHHHHHHHHHHHhCCCCCcEEEeecc-hhhHhhhhcCCCccEEEEeccchHHHHHHHH
Q 001665 356 WMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGT-NDVINHICDDEDIKAISFVASSTASVQMYAR 434 (1035)
Q Consensus 356 ~~l~~ALaaGNaVVlKPS~~ap~ta~~L~ell~eAGlP~gvv~vV~g~-~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~a 434 (1035)
+++++||++||+||+|||+.+|.++..|++++.++|+|+|+||+|+|+ .+.+..|+.|++|++|+||||+.+|+.|+++
T Consensus 166 ~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~ 245 (486)
T cd07140 166 WKMAACLAAGNTVVLKPAQVTPLTALKFAELTVKAGFPKGVINILPGSGSLVGQRLSDHPDVRKLGFTGSTPIGKHIMKS 245 (486)
T ss_pred HHHHHHHHhCCEEEEECCccCcHHHHHHHHHHHHcCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999985 4678999999999999999999999999999
Q ss_pred HHh-cCCceeecCCCcceEEEcCCCCHHHHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHhcccccCCC
Q 001665 435 AAA-RGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTD 512 (1035)
Q Consensus 435 Aa~-~l~Pv~lElGGknp~IV~~dADld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d 512 (1035)
|+. +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++|||+++++ +|+++|+++++++++|+|.+
T Consensus 246 aa~~~l~~v~lElGGk~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rl~V~~~i~~~f~~~l~~~~~~l~~g~p~~ 325 (486)
T cd07140 246 CAVSNLKKVSLELGGKSPLIIFADCDMDKAVRMGMSSVFFNKGENCIAAGRLFVEESIHDEFVRRVVEEVKKMKIGDPLD 325 (486)
T ss_pred HHhcCCCeEEEEcCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhCCccCCCC
Confidence 996 8999999999999999999999999999999999999999999999999999998 99999999999999999999
Q ss_pred CCCCcCCCcCHHHHHHHHHHHHHHHHCCCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecC-
Q 001665 513 ASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQAD- 591 (1035)
Q Consensus 513 ~~~~~Gpli~~~~~~rl~~~i~~av~~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~- 591 (1035)
+++++||++++.+++++.++|++++++||++++||... +..|+|++||||.+++++|.+++||+||||++|++|+
T Consensus 326 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~~----~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~ 401 (486)
T cd07140 326 RSTDHGPQNHKAHLDKLVEYCERGVKEGATLVYGGKQV----DRPGFFFEPTVFTDVEDHMFIAKEESFGPIMIISKFDD 401 (486)
T ss_pred CCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCC----CCCCeeECCEEEeCCCCCChhhhCCCCCCeEEEEEcCC
Confidence 99999999999999999999999999999999999642 2368999999999999999999999999999999998
Q ss_pred -CHHHHHHHHHhcCCCcEEEEEcCCHHHHHHHHhccceeEEEEcCCcC----CCCCCCCCCCCCCcCcHHHHHhcceeeE
Q 001665 592 -SLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPVP----SSFSSINESGEFNFCGKSGVQFYTQIKT 666 (1035)
Q Consensus 592 -d~eeAI~laN~~~~GLsasVfS~d~~~a~~~a~~l~sG~V~IN~~~~----~PfGG~g~SG~G~~~G~~g~~~ft~~k~ 666 (1035)
|++|||+++|+++|||++||||+|.+++++++.++++|.|+||+... +||||+|.||+|+++|++|+++||+.|+
T Consensus 402 ~~~~eai~~aN~~~~gL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~ 481 (486)
T cd07140 402 GDVDGVLQRANDTEYGLASGVFTKDINKALYVSDKLEAGTVFVNTYNKTDVAAPFGGFKQSGFGKDLGEEALNEYLKTKT 481 (486)
T ss_pred CCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCcCCCcchHHHHHHhhcEEE
Confidence 69999999999999999999999999999999999999999998532 8999999999999999999999999999
Q ss_pred EEE
Q 001665 667 VAQ 669 (1035)
Q Consensus 667 v~~ 669 (1035)
+++
T Consensus 482 v~~ 484 (486)
T cd07140 482 VTI 484 (486)
T ss_pred EEE
Confidence 875
|
10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids. |
| >PLN02315 aldehyde dehydrogenase family 7 member | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-88 Score=804.86 Aligned_cols=466 Identities=24% Similarity=0.404 Sum_probs=434.5
Q ss_pred CCccceEEcCEEecCCCCCeEEeecCCCCCeEEEecCCCHHHHHHHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHHhH
Q 001665 199 NNRVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDI 278 (1035)
Q Consensus 199 ~~~~~~~I~G~~~~~~~~~~~~v~nP~tGevi~~v~~~s~~dv~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~ 278 (1035)
+..+++||||+|+.+ +..++++||+||+++++++.++.+|+++||++|++||+.|++++.++|.++|++++++|+++.
T Consensus 18 ~~~~~~~I~G~~~~~--~~~~~~~nP~t~~~i~~~~~a~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~ 95 (508)
T PLN02315 18 SRNLGCYVGGEWRAN--GPLVSSVNPANNQPIAEVVEASLEDYEEGLRACEEAAKIWMQVPAPKRGEIVRQIGDALRAKL 95 (508)
T ss_pred ccccCceECCEEecC--CCeeeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHH
Confidence 456779999999864 568999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCccccCCCCCCcceeeeccceeEEEECCCCcchhchHHHH
Q 001665 279 DKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMF 358 (1035)
Q Consensus 279 e~La~~i~~etGk~~~eA~~EV~~a~~~l~~~~~~a~~~~g~~~~~~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l 358 (1035)
++|++++++|+||++.+++.|+..+++.++++++.+....+...+....+...+..++|+|||++|+|||||+.++++++
T Consensus 96 ~~la~~~~~e~GK~~~~a~~ev~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~ 175 (508)
T PLN02315 96 DYLGRLVSLEMGKILAEGIGEVQEIIDMCDFAVGLSRQLNGSIIPSERPNHMMMEVWNPLGIVGVITAFNFPCAVLGWNA 175 (508)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecceEEEEECCCcchHHHHHHHH
Confidence 99999999999999999999999999999999887766655433322223345678999999999999999999999999
Q ss_pred HHHHhcCCEEEEeCCCCChhHHHH----HHHHHHHhCCCCCcEEEeecchhhHhhhhcCCCccEEEEeccchHHHHHHHH
Q 001665 359 SIAVTCGNTFILKPSEKNPGTSMI----LAALAMEAGLPDGVLNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYAR 434 (1035)
Q Consensus 359 ~~ALaaGNaVVlKPS~~ap~ta~~----L~ell~eAGlP~gvv~vV~g~~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~a 434 (1035)
++||++||+||+|||+.+|+++.. +.++|.++|+|+|+||+|+|+.+.+..|+.|+++++|+||||+.+|+.|+++
T Consensus 176 ~~ALaaGN~VVlKPs~~tp~~~~~~~~l~~~~~~~aGlP~gvv~~v~g~~~~~~~l~~~~~v~~v~fTGS~~~G~~v~~~ 255 (508)
T PLN02315 176 CIALVCGNCVVWKGAPTTPLITIAMTKLVAEVLEKNNLPGAIFTSFCGGAEIGEAIAKDTRIPLVSFTGSSKVGLMVQQT 255 (508)
T ss_pred hHHHHcCCEEEeeCCCcChHHHHHHHHHHHHHHHHcCCCcccEEEecCChHHHHHHhcCCCCCEEEEECCHHHHHHHHHH
Confidence 999999999999999999999877 6777899999999999999976788999999999999999999999999999
Q ss_pred HHhcCCceeecCCCcceEEEcCCCCHHHHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHhcccccCCCC
Q 001665 435 AAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDA 513 (1035)
Q Consensus 435 Aa~~l~Pv~lElGGknp~IV~~dADld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d~ 513 (1035)
++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++|||+++++ +|+++|+++++++++|+|.++
T Consensus 256 aa~~~~~~~lElgGknp~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vG~p~~~ 335 (508)
T PLN02315 256 VNARFGKCLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLLLHESIYDDVLEQLLTVYKQVKIGDPLEK 335 (508)
T ss_pred HHhcCCCEEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhcCCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999998 999999999999999999999
Q ss_pred CCCcCCCcCHHHHHHHHHHHHHHHHCCCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecCCH
Q 001665 514 SADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSL 593 (1035)
Q Consensus 514 ~~~~Gpli~~~~~~rl~~~i~~av~~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~ 593 (1035)
++++|||++..+++++.+++++++++||++++||... +..|+|++|||+ +++++|.+++||+||||++|++|+|+
T Consensus 336 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~----~~~g~~~~Ptvl-~v~~~~~i~~eE~FGPVl~V~~~~~~ 410 (508)
T PLN02315 336 GTLLGPLHTPESKKNFEKGIEIIKSQGGKILTGGSAI----ESEGNFVQPTIV-EISPDADVVKEELFGPVLYVMKFKTL 410 (508)
T ss_pred CCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcC----CCCCeEEecEEE-ecCCCChHHhCCCcCCEEEEEEeCCH
Confidence 9999999999999999999999999999999999742 236899999999 59999999999999999999999999
Q ss_pred HHHHHHHHhcCCCcEEEEEcCCHHHHHHHHh--ccceeEEEEcCCc-----CCCCCCCCCCCCCCcCcHHHHHhcceeeE
Q 001665 594 EEAIKMVNRNRFVNGASIFTSSGLAARKFQN--EIEARLVGINVPV-----PSSFSSINESGEFNFCGKSGVQFYTQIKT 666 (1035)
Q Consensus 594 eeAI~laN~~~~GLsasVfS~d~~~a~~~a~--~l~sG~V~IN~~~-----~~PfGG~g~SG~G~~~G~~g~~~ft~~k~ 666 (1035)
||||+++|+++|||+++|||+|.+.++++++ ++++|.|+||... .+||||+|.||+|+++|.+++++||+.|+
T Consensus 411 deai~~aN~~~~gL~a~Vft~d~~~a~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~ 490 (508)
T PLN02315 411 EEAIEINNSVPQGLSSSIFTRNPETIFKWIGPLGSDCGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRST 490 (508)
T ss_pred HHHHHHHhCCCCCCeEEEEcCCHHHHHHHhhhcccceeEEEEcCCCCCCCCCCCCCccccccCCccchHHHHHHHhhEEE
Confidence 9999999999999999999999999999984 7999999999742 28999999999999999999999999999
Q ss_pred EEEec
Q 001665 667 VAQQW 671 (1035)
Q Consensus 667 v~~~~ 671 (1035)
|+..+
T Consensus 491 v~~~~ 495 (508)
T PLN02315 491 CTINY 495 (508)
T ss_pred EEEec
Confidence 98764
|
|
| >cd07117 ALDH_StaphAldA1 Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-88 Score=799.73 Aligned_cols=465 Identities=28% Similarity=0.404 Sum_probs=434.4
Q ss_pred ceEEcCEEecCCCCCeEEeecCCCCCeEEEecCCCHHHHHHHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHHhHHHHH
Q 001665 203 SNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLA 282 (1035)
Q Consensus 203 ~~~I~G~~~~~~~~~~~~v~nP~tGevi~~v~~~s~~dv~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e~La 282 (1035)
.+||||+|+.+.++..++++||+||+++++++.++.+|++++++.|++||+.|+.++.++|.++|++++++|+++.++|+
T Consensus 2 ~~~i~g~~~~~~~~~~~~~~nP~t~~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la 81 (475)
T cd07117 2 GLFINGEWVKGSSGETIDSYNPANGETLSEITDATDADVDRAVKAAQEAFKTWRKTTVAERANILNKIADIIDENKELLA 81 (475)
T ss_pred CceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHH
Confidence 57999999987667889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHhhcCccccCCCCCCcceeeeccceeEEEECCCCcchhchHHHHHHH
Q 001665 283 MNITVEQGTTLKAAQR-DVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIA 361 (1035)
Q Consensus 283 ~~i~~etGk~~~eA~~-EV~~a~~~l~~~~~~a~~~~g~~~~~~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~A 361 (1035)
++++.|+||++.+++. |+..+++.+++++..+....+...... .+...+++++|+|||++|+|||||+.++++++++|
T Consensus 82 ~~~~~e~Gk~~~~a~~~ev~~~i~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVV~~I~PwN~Pl~~~~~~i~~A 160 (475)
T cd07117 82 MVETLDNGKPIRETRAVDIPLAADHFRYFAGVIRAEEGSANMID-EDTLSIVLREPIGVVGQIIPWNFPFLMAAWKLAPA 160 (475)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccC-CCceeEEEEeecceEEEECCCccHHHHHHHHHHHH
Confidence 9999999999999975 999999999998877665544332211 23346788999999999999999999999999999
Q ss_pred HhcCCEEEEeCCCCChhHHHHHHHHHHHhCCCCCcEEEeecc-hhhHhhhhcCCCccEEEEeccchHHHHHHHHHHhcCC
Q 001665 362 VTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGT-NDVINHICDDEDIKAISFVASSTASVQMYARAAARGK 440 (1035)
Q Consensus 362 LaaGNaVVlKPS~~ap~ta~~L~ell~eAGlP~gvv~vV~g~-~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~l~ 440 (1035)
|++||+||+|||+.+|.++..+++++.++ +|+|++|+|+|+ .+.+..|+.|+++|+|+||||+.+|+.|+++++++++
T Consensus 161 L~aGN~VvlKPs~~~p~~~~~l~~~~~~~-lP~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~ 239 (475)
T cd07117 161 LAAGNTVVIKPSSTTSLSLLELAKIIQDV-LPKGVVNIVTGKGSKSGEYLLNHPGLDKLAFTGSTEVGRDVAIAAAKKLI 239 (475)
T ss_pred HHcCCEEEEECCccCcHHHHHHHHHHHHh-CCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCC
Confidence 99999999999999999999999999885 999999999984 5788999999999999999999999999999999999
Q ss_pred ceeecCCCcceEEEcCCCCHHHHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHhcccccCCCCCCCcCC
Q 001665 441 RVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDASADVGP 519 (1035)
Q Consensus 441 Pv~lElGGknp~IV~~dADld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d~~~~~Gp 519 (1035)
|+++|+|||||+||++|||++.|++.+++++|+|+||.|+++++|||+++++ +|+++|++.++++++|+|.++++++||
T Consensus 240 ~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~gp 319 (475)
T cd07117 240 PATLELGGKSANIIFDDANWDKALEGAQLGILFNQGQVCCAGSRIFVQEGIYDEFVAKLKEKFENVKVGNPLDPDTQMGA 319 (475)
T ss_pred cEEEeCCCCCeEEECCCCChHHHHHHHHHHHhhccCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCcccC
Confidence 9999999999999999999999999999999999999999999999999998 899999999999999999999999999
Q ss_pred CcCHHHHHHHHHHHHHHHHCCCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecCCHHHHHHH
Q 001665 520 VVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKM 599 (1035)
Q Consensus 520 li~~~~~~rl~~~i~~av~~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI~l 599 (1035)
++++.+++++.++|++++++|+++++||.....++...|+|++||||.++++++.+++||+||||++|++|+|++|||++
T Consensus 320 li~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~ 399 (475)
T cd07117 320 QVNKDQLDKILSYVDIAKEEGAKILTGGHRLTENGLDKGFFIEPTLIVNVTNDMRVAQEEIFGPVATVIKFKTEDEVIDM 399 (475)
T ss_pred cCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCccccCCCCeEEeeEEeecCCCCChhhhCCCcCCeEEEEEECCHHHHHHH
Confidence 99999999999999999999999999987532222246899999999999999999999999999999999999999999
Q ss_pred HHhcCCCcEEEEEcCCHHHHHHHHhccceeEEEEcCCcC----CCCCCCCCCCCCCcCcHHHHHhcceeeEEEE
Q 001665 600 VNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPVP----SSFSSINESGEFNFCGKSGVQFYTQIKTVAQ 669 (1035)
Q Consensus 600 aN~~~~GLsasVfS~d~~~a~~~a~~l~sG~V~IN~~~~----~PfGG~g~SG~G~~~G~~g~~~ft~~k~v~~ 669 (1035)
+|+++|||++||||+|.+++.++++++++|.|+||+... +||||+|.||+|+++|++|+++||+.|+++.
T Consensus 400 ~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~~ 473 (475)
T cd07117 400 ANDSEYGLGGGVFTKDINRALRVARAVETGRVWVNTYNQIPAGAPFGGYKKSGIGRETHKSMLDAYTQMKNIYI 473 (475)
T ss_pred HhCCCcCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccCcCCCCchHHHHHHHhCeEEEEE
Confidence 999999999999999999999999999999999998532 8999999999999999999999999999875
|
Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. |
| >cd07559 ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-88 Score=801.80 Aligned_cols=467 Identities=28% Similarity=0.416 Sum_probs=436.7
Q ss_pred cceEEcCEEecCCCCCeEEeecCCCCCeEEEecCCCHHHHHHHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHHhHHHH
Q 001665 202 VSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKL 281 (1035)
Q Consensus 202 ~~~~I~G~~~~~~~~~~~~v~nP~tGevi~~v~~~s~~dv~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e~L 281 (1035)
+++||||+|+.+.++..++++||+||+++++++.++.+|++++|++|++||+.|+.++.++|.++|++++++|+++.++|
T Consensus 1 ~~~~I~g~~~~~~~~~~~~v~~P~t~~~~~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 80 (480)
T cd07559 1 YDNFINGEWVAPSKGEYFDNYNPVNGKVLCEIPRSTAEDVDLAVDAAHEAFKTWGKTSVAERANILNKIADRIEENLELL 80 (480)
T ss_pred CCccCCCEEecCCCCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 35799999998766789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHhhcCccccCCCCCCcceeeeccceeEEEECCCCcchhchHHHHHH
Q 001665 282 AMNITVEQGTTLKAAQ-RDVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSI 360 (1035)
Q Consensus 282 a~~i~~etGk~~~eA~-~EV~~a~~~l~~~~~~a~~~~g~~~~~~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~ 360 (1035)
++++++|+||++.+++ .|+..+++.++++++......+..... ..+...+++++|+|||++|+|||||+.++++++++
T Consensus 81 a~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~i~~ 159 (480)
T cd07559 81 AVAETLDNGKPIRETLAADIPLAIDHFRYFAGVIRAQEGSLSEI-DEDTLSYHFHEPLGVVGQIIPWNFPLLMAAWKLAP 159 (480)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccC-CCCceeEEEEeccceEEEECCCchHHHHHHHHHHH
Confidence 9999999999999997 499999999999988776655443221 13445678899999999999999999999999999
Q ss_pred HHhcCCEEEEeCCCCChhHHHHHHHHHHHhCCCCCcEEEeecc-hhhHhhhhcCCCccEEEEeccchHHHHHHHHHHhcC
Q 001665 361 AVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGT-NDVINHICDDEDIKAISFVASSTASVQMYARAAARG 439 (1035)
Q Consensus 361 ALaaGNaVVlKPS~~ap~ta~~L~ell~eAGlP~gvv~vV~g~-~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~l 439 (1035)
||++||+||+|||+.+|.++..+++++.++ +|+|+||+|+|+ .+.+..|+.|++|++|+||||+.+|+.|+++|++++
T Consensus 160 ALaaGN~VV~KPs~~tp~~~~~l~~l~~~~-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa~~~ 238 (480)
T cd07559 160 ALAAGNTVVLKPASQTPLSILVLMELIGDL-LPKGVVNVVTGFGSEAGKPLASHPRIAKLAFTGSTTVGRLIMQYAAENL 238 (480)
T ss_pred HHHcCCEEEEECchhhhHHHHHHHHHHHHh-CCcCeEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccC
Confidence 999999999999999999999999999996 999999999995 578899999999999999999999999999999999
Q ss_pred CceeecCCCcceEEEcCCC-----CHHHHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHhcccccCCCC
Q 001665 440 KRVQSNRGGKNYAIIMPDA-----SIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDA 513 (1035)
Q Consensus 440 ~Pv~lElGGknp~IV~~dA-----Dld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d~ 513 (1035)
+|+++|||||||+||++|| |++.|++.+++++|+|+||.|+++++|||+++++ +|+++|+++++++++|+|.++
T Consensus 239 ~p~~lElGGk~p~iV~~dA~~~~~Dl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~ 318 (480)
T cd07559 239 IPVTLELGGKSPNIFFDDAMDADDDFDDKAEEGQLGFAFNQGEVCTCPSRALVQESIYDEFIERAVERFEAIKVGNPLDP 318 (480)
T ss_pred CcEEeccCCCCeEEEcCCccccccCHHHHHHHHHHHHHhhCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 9999999999999999999 9999999999999999999999999999999998 999999999999999999999
Q ss_pred CCCcCCCcCHHHHHHHHHHHHHHHHCCCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecCCH
Q 001665 514 SADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSL 593 (1035)
Q Consensus 514 ~~~~Gpli~~~~~~rl~~~i~~av~~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~ 593 (1035)
++++|||+++.+++++.++|++++++||++++||.....+....|+|++|||+.+++++|.+++||+||||++|++|+|+
T Consensus 319 ~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~ 398 (480)
T cd07559 319 ETMMGAQVSKDQLEKILSYVDIGKEEGAEVLTGGERLTLGGLDKGYFYEPTLIKGGNNDMRIFQEEIFGPVLAVITFKDE 398 (480)
T ss_pred CCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCccccCCCCcEECeEEEeCCCCCCcHHhcCCcCceEEEEeeCCH
Confidence 99999999999999999999999999999999997532222246899999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCcEEEEEcCCHHHHHHHHhccceeEEEEcCCc----CCCCCCCCCCCCCCcCcHHHHHhcceeeEEEE
Q 001665 594 EEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPV----PSSFSSINESGEFNFCGKSGVQFYTQIKTVAQ 669 (1035)
Q Consensus 594 eeAI~laN~~~~GLsasVfS~d~~~a~~~a~~l~sG~V~IN~~~----~~PfGG~g~SG~G~~~G~~g~~~ft~~k~v~~ 669 (1035)
+|||+++|+++|||+++|||+|.+++.++++++++|+|+||... .+||||+|.||+|+++|++|+++||+.|+++.
T Consensus 399 ~eai~~~n~~~~gL~~~v~t~d~~~a~~~a~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~~~~~k~v~~ 478 (480)
T cd07559 399 EEAIAIANDTEYGLGGGVWTRDINRALRVARGIQTGRVWVNCYHQYPAHAPFGGYKKSGIGRETHKMMLDHYQQTKNILV 478 (480)
T ss_pred HHHHHHHhCCCCCCeEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCCccCcCCccChHHHHHHhhceEEEEE
Confidence 99999999999999999999999999999999999999999753 28999999999999999999999999999876
Q ss_pred e
Q 001665 670 Q 670 (1035)
Q Consensus 670 ~ 670 (1035)
.
T Consensus 479 ~ 479 (480)
T cd07559 479 S 479 (480)
T ss_pred e
Confidence 4
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. |
| >PLN02467 betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-87 Score=797.32 Aligned_cols=467 Identities=28% Similarity=0.428 Sum_probs=437.6
Q ss_pred cceEEcCEEecCCCCCeEEeecCCCCCeEEEecCCCHHHHHHHHHHHHHhh-----HhhhCCCHHHHHHHHHHHHHHHHH
Q 001665 202 VSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAF-----PAWKNTPVATRQRIMFKLQELIRR 276 (1035)
Q Consensus 202 ~~~~I~G~~~~~~~~~~~~v~nP~tGevi~~v~~~s~~dv~~av~~Ar~A~-----~~W~~~s~~~R~~iL~~la~~L~~ 276 (1035)
.++||||+|+.+.++..++++||+||+++++++.++.+|+++|+++|++|| +.|+.++.++|.++|++++++|++
T Consensus 8 ~~~~I~g~~~~~~~~~~~~v~~P~t~~~i~~~~~~~~~dv~~av~~A~~a~~~~~~~~W~~~~~~~R~~~L~~~a~~l~~ 87 (503)
T PLN02467 8 RQLFIGGEWREPVLGKRIPVVNPATEETIGDIPAATAEDVDAAVEAARKAFKRNKGKDWARTTGAVRAKYLRAIAAKITE 87 (503)
T ss_pred cCceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHhhhcccchhhcCCHHHHHHHHHHHHHHHHH
Confidence 368999999987667889999999999999999999999999999999999 899999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCccc---cCCCCCCcceeeeccceeEEEECCCCcchhc
Q 001665 277 DIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFV---PNALCGLDTYCFREPLGVCAGICPFNFPDMT 353 (1035)
Q Consensus 277 ~~e~La~~i~~etGk~~~eA~~EV~~a~~~l~~~~~~a~~~~g~~~---~~~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~ 353 (1035)
++++|++++++|+||++.+++.|+..++..+++++..+....+... .....+...+++++|+|||++|+|||||+.+
T Consensus 88 ~~~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~ 167 (503)
T PLN02467 88 RKSELAKLETLDCGKPLDEAAWDMDDVAGCFEYYADLAEALDAKQKAPVSLPMETFKGYVLKEPLGVVGLITPWNYPLLM 167 (503)
T ss_pred hHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccCCCCCCceeEEEEecCceEEEECCCChHHHH
Confidence 9999999999999999999999999999999999987776654321 1111133467889999999999999999999
Q ss_pred hHHHHHHHHhcCCEEEEeCCCCChhHHHHHHHHHHHhCCCCCcEEEeecc-hhhHhhhhcCCCccEEEEeccchHHHHHH
Q 001665 354 PLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGT-NDVINHICDDEDIKAISFVASSTASVQMY 432 (1035)
Q Consensus 354 ~~~~l~~ALaaGNaVVlKPS~~ap~ta~~L~ell~eAGlP~gvv~vV~g~-~e~~~~L~~h~~vd~V~fTGS~~vG~~I~ 432 (1035)
+++++++||++||+||+|||+.+|.++..++++|.++|+|+|+||+|+|+ .+.+..|+.|++|++|+||||+.+|+.|+
T Consensus 168 ~~~~i~~ALaaGN~Vv~Kps~~tp~~~~~l~~~~~eag~P~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~ 247 (503)
T PLN02467 168 ATWKVAPALAAGCTAVLKPSELASVTCLELADICREVGLPPGVLNVVTGLGTEAGAPLASHPGVDKIAFTGSTATGRKIM 247 (503)
T ss_pred HHHHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHHHcCcCcCeEEEEeCCchhHHHHHhcCCCCCEEEEECCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999994 57789999999999999999999999999
Q ss_pred HHHHhcCCceeecCCCcceEEEcCCCCHHHHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHhcccccCC
Q 001665 433 ARAAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGT 511 (1035)
Q Consensus 433 ~aAa~~l~Pv~lElGGknp~IV~~dADld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~ 511 (1035)
+.++.+++|+++|+|||||+||++|||++.|++.|++++|.|+||.|+++++|||+++++ +|+++|+++++++++|+|.
T Consensus 248 ~~aa~~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~ 327 (503)
T PLN02467 248 TAAAQMVKPVSLELGGKSPIIVFDDVDLDKAVEWAMFGCFWTNGQICSATSRLLVHERIASEFLEKLVKWAKNIKISDPL 327 (503)
T ss_pred HHHhccCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHHhhcCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999998 9999999999999999999
Q ss_pred CCCCCcCCCcCHHHHHHHHHHHHHHHHCCCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecC
Q 001665 512 DASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQAD 591 (1035)
Q Consensus 512 d~~~~~Gpli~~~~~~rl~~~i~~av~~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~ 591 (1035)
++++++|||+++.+++++.++|++++.+|+++++||.... ....|+|++||||.++++++.+++||+||||++|++|+
T Consensus 328 ~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~vl~gG~~~~--~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~ 405 (503)
T PLN02467 328 EEGCRLGPVVSEGQYEKVLKFISTAKSEGATILCGGKRPE--HLKKGFFIEPTIITDVTTSMQIWREEVFGPVLCVKTFS 405 (503)
T ss_pred CCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCC--CCCCCeEEeeEEEeCCCCCChHhhCCCCCceEEEEeeC
Confidence 9999999999999999999999999999999999986421 11368999999999999999999999999999999999
Q ss_pred CHHHHHHHHHhcCCCcEEEEEcCCHHHHHHHHhccceeEEEEcCCc----CCCCCCCCCCCCCCcCcHHHHHhcceeeEE
Q 001665 592 SLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPV----PSSFSSINESGEFNFCGKSGVQFYTQIKTV 667 (1035)
Q Consensus 592 d~eeAI~laN~~~~GLsasVfS~d~~~a~~~a~~l~sG~V~IN~~~----~~PfGG~g~SG~G~~~G~~g~~~ft~~k~v 667 (1035)
|+||||+++|+++|||+++|||+|.+.+.++++++++|.|+||+.. .+||||+|.||+|+++|.+|+++|++.|++
T Consensus 406 ~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~i 485 (503)
T PLN02467 406 TEDEAIELANDSHYGLAGAVISNDLERCERVSEAFQAGIVWINCSQPCFCQAPWGGIKRSGFGRELGEWGLENYLSVKQV 485 (503)
T ss_pred CHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCcCCCcchHHHHHHhhCeEEE
Confidence 9999999999999999999999999999999999999999999763 289999999999999999999999999999
Q ss_pred EEe
Q 001665 668 AQQ 670 (1035)
Q Consensus 668 ~~~ 670 (1035)
...
T Consensus 486 ~~~ 488 (503)
T PLN02467 486 TKY 488 (503)
T ss_pred EEe
Confidence 875
|
|
| >cd07142 ALDH_F2BC Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-87 Score=796.84 Aligned_cols=462 Identities=30% Similarity=0.430 Sum_probs=433.5
Q ss_pred cceEEcCEEecCCCCCeEEeecCCCCCeEEEecCCCHHHHHHHHHHHHHhhHh--hhCCCHHHHHHHHHHHHHHHHHhHH
Q 001665 202 VSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPA--WKNTPVATRQRIMFKLQELIRRDID 279 (1035)
Q Consensus 202 ~~~~I~G~~~~~~~~~~~~v~nP~tGevi~~v~~~s~~dv~~av~~Ar~A~~~--W~~~s~~~R~~iL~~la~~L~~~~e 279 (1035)
+++||||+|+.+.++..++++||+||+++++++.++.+|+++++++|++||+. |+.++.++|.++|++++++|+++.+
T Consensus 4 ~~~~i~g~~~~~~~~~~~~v~~P~t~~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 83 (476)
T cd07142 4 TKLFINGQFVDAASGKTFPTIDPRNGEVIAHVAEGDAEDVDRAVKAARKAFDEGPWPRMTGYERSRILLRFADLLEKHAD 83 (476)
T ss_pred ccceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHhcCCCchhhCCHHHHHHHHHHHHHHHHHhHH
Confidence 45799999997666778999999999999999999999999999999999975 9999999999999999999999999
Q ss_pred HHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHhhcCccccCCCCCCcceeeeccceeEEEECCCCcchhchHHHH
Q 001665 280 KLAMNITVEQGTTLKAAQ-RDVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMF 358 (1035)
Q Consensus 280 ~La~~i~~etGk~~~eA~-~EV~~a~~~l~~~~~~a~~~~g~~~~~~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l 358 (1035)
+|++++++|+||++.+++ .|+..+++.+++++.++....+...+.. .+...+++++|+|||++|+|||||+.++++++
T Consensus 84 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~-~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~i 162 (476)
T cd07142 84 ELAALETWDNGKPYEQARYAEVPLAARLFRYYAGWADKIHGMTLPAD-GPHHVYTLHEPIGVVGQIIPWNFPLLMFAWKV 162 (476)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccC-CCceEEEEEeceeeEEEECCCccHHHHHHHHH
Confidence 999999999999999986 4999999999999887766655443321 22345788999999999999999999999999
Q ss_pred HHHHhcCCEEEEeCCCCChhHHHHHHHHHHHhCCCCCcEEEeecch-hhHhhhhcCCCccEEEEeccchHHHHHHHHHHh
Q 001665 359 SIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGTN-DVINHICDDEDIKAISFVASSTASVQMYARAAA 437 (1035)
Q Consensus 359 ~~ALaaGNaVVlKPS~~ap~ta~~L~ell~eAGlP~gvv~vV~g~~-e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~ 437 (1035)
++||++||+||+|||+.+|.++.+|+++|.++|+|+|+||+|+|+. +.+..|+.|+++++|+||||+.+|+.|++.+++
T Consensus 163 ~~ALaaGN~VV~KPs~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~~~G~~v~~~aa~ 242 (476)
T cd07142 163 GPALACGNTIVLKPAEQTPLSALLAAKLAAEAGLPDGVLNIVTGFGPTAGAAIASHMDVDKVAFTGSTEVGKIIMQLAAK 242 (476)
T ss_pred HHHHHcCCEEEEECCCcccHHHHHHHHHHHHcCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999854 578899999999999999999999999999997
Q ss_pred -cCCceeecCCCcceEEEcCCCCHHHHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHhcccccCCCCCC
Q 001665 438 -RGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDASA 515 (1035)
Q Consensus 438 -~l~Pv~lElGGknp~IV~~dADld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d~~~ 515 (1035)
+++|+++|||||||+||++|||++.|++.+++++|+|+||.|+++++|||+++++ +|+++|+++++++++|+|.++++
T Consensus 243 ~~~~~v~lElgGk~p~iV~~dADl~~Aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 322 (476)
T cd07142 243 SNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHESIYDEFVEKAKARALKRVVGDPFRKGV 322 (476)
T ss_pred cCCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHhcCCCCCCCCCeeEEEeHHHHHHHHHHHHHHHHhcCCCCCCCCCC
Confidence 8999999999999999999999999999999999999999999999999999998 99999999999999999999999
Q ss_pred CcCCCcCHHHHHHHHHHHHHHHHCCCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecCCHHH
Q 001665 516 DVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEE 595 (1035)
Q Consensus 516 ~~Gpli~~~~~~rl~~~i~~av~~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~ee 595 (1035)
++||++++.+++++.++|++++++||++++||... ...|+|++||||.++++++.+++||+||||++|++|+|++|
T Consensus 323 ~~Gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~----~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~e 398 (476)
T cd07142 323 EQGPQVDKEQFEKILSYIEHGKEEGATLITGGDRI----GSKGYYIQPTIFSDVKDDMKIARDEIFGPVQSILKFKTVDE 398 (476)
T ss_pred cCCcCcCHHHHHHHHHHHHHHHhCCCEEEecCCcC----CCCCeeEccEEeecCCCCChhhhCCccCceEEEEeeCCHHH
Confidence 99999999999999999999999999999998742 23689999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCcEEEEEcCCHHHHHHHHhccceeEEEEcCCcC----CCCCCCCCCCCCCcCcHHHHHhcceeeEEE
Q 001665 596 AIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPVP----SSFSSINESGEFNFCGKSGVQFYTQIKTVA 668 (1035)
Q Consensus 596 AI~laN~~~~GLsasVfS~d~~~a~~~a~~l~sG~V~IN~~~~----~PfGG~g~SG~G~~~G~~g~~~ft~~k~v~ 668 (1035)
||+++|+++|||+++|||+|.+.+.++++++++|.|+||+... +||||+|.||+|+++|.+|+++||+.|+++
T Consensus 399 ai~~~n~~~~gL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~ 475 (476)
T cd07142 399 VIKRANNSKYGLAAGVFSKNIDTANTLSRALKAGTVWVNCYDVFDASIPFGGYKMSGIGREKGIYALNNYLQVKAVV 475 (476)
T ss_pred HHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccCcCCccchHHHHHHhhheeEEe
Confidence 9999999999999999999999999999999999999997532 899999999999999999999999999875
|
Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. |
| >TIGR02299 HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-87 Score=796.77 Aligned_cols=468 Identities=31% Similarity=0.463 Sum_probs=435.7
Q ss_pred cceEEcCEEecCCCCCeEEeecCCCCCeEEEecCCCHHHHHHHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHHhHHHH
Q 001665 202 VSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKL 281 (1035)
Q Consensus 202 ~~~~I~G~~~~~~~~~~~~v~nP~tGevi~~v~~~s~~dv~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e~L 281 (1035)
+++||||+|+.+.++..++++||+||+++++++.++.+++++++++|++||+.|+.++.++|.++|++++++|++++++|
T Consensus 1 ~~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l 80 (488)
T TIGR02299 1 IGHFIDGEFVPSESGETFETLSPATNEVLGSVARGGAADVDRAAKAAKEAFKRWAELKAAERKRYLHKIADLIEQHADEI 80 (488)
T ss_pred CCccCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 35799999998766778999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHH-hhcCccccCCCCCCcceeeeccceeEEEECCCCcchhchHHHHHH
Q 001665 282 AMNITVEQGTTLKAAQRDVLFGLEVVEQACAVAT-LQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSI 360 (1035)
Q Consensus 282 a~~i~~etGk~~~eA~~EV~~a~~~l~~~~~~a~-~~~g~~~~~~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~ 360 (1035)
++++++|+||++.+++.|+..+++.+++++..+. ...+...+. .+...+++++|+|||++|+|||||+.++++++++
T Consensus 81 ~~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ 158 (488)
T TIGR02299 81 AVLECLDCGQPLRQTRQQVIRAAENFRFFADKCEEAMDGRTYPV--DTHLNYTVRVPVGPVGLITPWNAPFMLSTWKIAP 158 (488)
T ss_pred HHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHhHHHhcCCccccC--CCceEEEEEEecceEEEECCCccHHHHHHHHHHH
Confidence 9999999999999999999999999999887765 333332222 1334578899999999999999999999999999
Q ss_pred HHhcCCEEEEeCCCCChhHHHHHHHHHHHhCCCCCcEEEeecc-hhhHhhhhcCCCccEEEEeccchHHHHHHHHHHhcC
Q 001665 361 AVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGT-NDVINHICDDEDIKAISFVASSTASVQMYARAAARG 439 (1035)
Q Consensus 361 ALaaGNaVVlKPS~~ap~ta~~L~ell~eAGlP~gvv~vV~g~-~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~l 439 (1035)
||++||+||+|||+.+|.++.+|+++|.++|+|+|+||+|+|+ .+.+..|+.|++||+|+||||+.+|+.|++.|++++
T Consensus 159 ALaaGN~VIlKps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~aa~~l 238 (488)
T TIGR02299 159 ALAFGNTVVLKPAEWSPLTAARLAEIAKEAGLPDGVFNLVHGFGEEAGKALVAHPDVKAVSFTGETATGSIIMRNGADTL 238 (488)
T ss_pred HHHcCCEEEEECchhchHHHHHHHHHHHHcCcChhheeEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999999984 567889999999999999999999999999999999
Q ss_pred CceeecCCCcceEEEcCCCCHHHHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHhcccccCCCCCCCcC
Q 001665 440 KRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDASADVG 518 (1035)
Q Consensus 440 ~Pv~lElGGknp~IV~~dADld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d~~~~~G 518 (1035)
+|+++|+|||||+||++|||++.|++.|++++|+|+||.|+++++||||++++ +|+++|+++++++++|+|.++++++|
T Consensus 239 ~~~~lElGGknp~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~l~~g~p~~~~~~~G 318 (488)
T TIGR02299 239 KRFSMELGGKSPVIVFDDADLERALDAVVFMIFSFNGERCTASSRLLVQESIAEDFVEKLVERVRAIRVGHPLDPETEVG 318 (488)
T ss_pred CeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEcHHHHHHHHHHHHHHHhhCCcCCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999998 89999999999999999999999999
Q ss_pred CCcCHHHHHHHHHHHHHHHHCCCcEeeCCccccc---CCCCCCceeeceEEecCCCCCccccccccCcceeEEecCCHHH
Q 001665 519 PVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVV---PGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEE 595 (1035)
Q Consensus 519 pli~~~~~~rl~~~i~~av~~GAkvl~gG~~~~~---p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~ee 595 (1035)
|++++.+++++.++|++++++|+++++||..... ....+|+|++|||+.++++++.+++||+||||++|++|+|++|
T Consensus 319 pli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~e 398 (488)
T TIGR02299 319 PLIHPEHLAKVLGYVEAAEKEGATILVGGERAPTFRGEDLGRGNYVLPTVFTGADNHMRIAQEEIFGPVLTVIPFKDEEE 398 (488)
T ss_pred CCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCcccccccCCCCeEEccEEEecCCCCCchhhCCCcCCeEEEEeeCCHHH
Confidence 9999999999999999999999999999864211 0013589999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCcEEEEEcCCHHHHHHHHhccceeEEEEcCCcC----CCCCCCCCCCCCCcCcHHHHHhcceeeEEEEec
Q 001665 596 AIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPVP----SSFSSINESGEFNFCGKSGVQFYTQIKTVAQQW 671 (1035)
Q Consensus 596 AI~laN~~~~GLsasVfS~d~~~a~~~a~~l~sG~V~IN~~~~----~PfGG~g~SG~G~~~G~~g~~~ft~~k~v~~~~ 671 (1035)
||+++|+.+|||++||||+|.+.++++++++++|.|+||+... +||||+|.||+|+++|.+|+++|++.|+++..+
T Consensus 399 ai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~~~~~k~i~~~~ 478 (488)
T TIGR02299 399 AIEKANDTRYGLAGYVWTNDVGRAHRVALALEAGMIWVNSQNVRHLPTPFGGVKASGIGREGGTYSFDFYTETKNVALAL 478 (488)
T ss_pred HHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCccCcCCccchHHHHHHHhceEEEEEec
Confidence 9999999999999999999999999999999999999997532 899999999999999999999999999998753
|
This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. |
| >TIGR03216 OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-87 Score=794.91 Aligned_cols=466 Identities=28% Similarity=0.437 Sum_probs=432.0
Q ss_pred cceEEcCEEecCCCCCeEEeecCCCCCeEEEecCCCHHHHHHHHHHHHHhhHh-hhCCCHHHHHHHHHHHHHHHHHhHHH
Q 001665 202 VSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPA-WKNTPVATRQRIMFKLQELIRRDIDK 280 (1035)
Q Consensus 202 ~~~~I~G~~~~~~~~~~~~v~nP~tGevi~~v~~~s~~dv~~av~~Ar~A~~~-W~~~s~~~R~~iL~~la~~L~~~~e~ 280 (1035)
+++||||+|+. ++..++++||+||+++++++.++.+++++++++|++||+. |+.++.++|.++|++++++|+++.++
T Consensus 1 ~~~~i~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 78 (481)
T TIGR03216 1 IRNFINGAFVE--SGKTFANINPVDGRVIARVHEAGAAEVDAAVAAARAALKGPWGKMTVAERADLLYAVADEIERRFDD 78 (481)
T ss_pred CCceECCEEec--CCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhHhhHhhCCHHHHHHHHHHHHHHHHHhHHH
Confidence 35799999996 3578999999999999999999999999999999999997 99999999999999999999999999
Q ss_pred HHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHhhcCccccCCC-C--CCcceeeeccceeEEEECCCCcchhchHH
Q 001665 281 LAMNITVEQGTTLKAAQR-DVLFGLEVVEQACAVATLQIGEFVPNAL-C--GLDTYCFREPLGVCAGICPFNFPDMTPLW 356 (1035)
Q Consensus 281 La~~i~~etGk~~~eA~~-EV~~a~~~l~~~~~~a~~~~g~~~~~~~-~--g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~ 356 (1035)
|++++++|+||+..+++. |+..+++.++++++.+....+....... . +...+.+++|+|||++|+|||||+.++++
T Consensus 79 la~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~Pl~~~~~ 158 (481)
T TIGR03216 79 FLAAEVADTGKPRSLASHLDIPRGAANFRVFADVVKNAPTECFEMATPDGKGALNYAVRKPLGVVGVISPWNLPLLLMTW 158 (481)
T ss_pred HHHHHHHHcCCcHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccccCCCCCCceeEEEEeccceEEEECCCCcHHHHHHH
Confidence 999999999999999964 9999999999988877654443222111 1 23456789999999999999999999999
Q ss_pred HHHHHHhcCCEEEEeCCCCChhHHHHHHHHHHHhCCCCCcEEEeecc-h-hhHhhhhcCCCccEEEEeccchHHHHHHHH
Q 001665 357 MFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGT-N-DVINHICDDEDIKAISFVASSTASVQMYAR 434 (1035)
Q Consensus 357 ~l~~ALaaGNaVVlKPS~~ap~ta~~L~ell~eAGlP~gvv~vV~g~-~-e~~~~L~~h~~vd~V~fTGS~~vG~~I~~a 434 (1035)
++++||++||+||+|||+.+|.++.+|+++|.++|+|+|++|+|+|. . +.+..|+.|++||+|+||||+.+|+.|+++
T Consensus 159 ~~~~ALaaGN~vvlKPs~~tp~t~~~l~~l~~~aglP~g~~~~v~g~~~~~~~~~l~~~~~vd~v~fTGS~~~G~~i~~~ 238 (481)
T TIGR03216 159 KVGPALACGNTVVVKPSEETPGTATLLGEVMNAVGVPKGVYNVVHGFGPDSAGEFLTRHPGVDAITFTGETRTGSAIMKA 238 (481)
T ss_pred HHHHHHHcCCEEEEECCccchHHHHHHHHHHHHcCCCcCceEEEecCChhHHHHHHhcCCCCCEEEEECCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999984 3 477889999999999999999999999999
Q ss_pred HHhcCCceeecCCCcceEEEcCCCCHHHHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHhcccccCCCC
Q 001665 435 AAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDA 513 (1035)
Q Consensus 435 Aa~~l~Pv~lElGGknp~IV~~dADld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d~ 513 (1035)
++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++ +|+++|+++++++++|+|.++
T Consensus 239 aa~~~~~~~lElgG~n~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~ 318 (481)
T TIGR03216 239 AADGVKPVSFELGGKNAAIVFADCDFDAAVAGILRSAFLNTGQVCLGTERVYVERPIFDRFVAALKARAESLKIGVPDDP 318 (481)
T ss_pred HhcCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999998 999999999999999999999
Q ss_pred CCCcCCCcCHHHHHHHHHHHHHHHHCCCcEeeCCcccccC-CCCCCceeeceEEecCCCCCccccccccCcceeEEecCC
Q 001665 514 SADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVP-GYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADS 592 (1035)
Q Consensus 514 ~~~~Gpli~~~~~~rl~~~i~~av~~GAkvl~gG~~~~~p-~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d 592 (1035)
++++||++++.+++++.++|++++++|+++++||.....+ +..+|+|++||||.+++++|.+++||+||||++|++|+|
T Consensus 319 ~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FgPvl~V~~~~~ 398 (481)
T TIGR03216 319 ATNMGPLISAEHRDKVLSYYALAVEEGATVVTGGGVPDFGDALAGGAWVQPTIWTGLPDSARVVTEEIFGPCCHIAPFDS 398 (481)
T ss_pred CCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcccccccCCCCceEccEEEeCCCCCCHHHhCCCCCceEEEEEeCC
Confidence 9999999999999999999999999999999999643221 124699999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCcEEEEEcCCHHHHHHHHhccceeEEEEcCCcC----CCCCCCCCCCCCCcCcHHHHHhcceeeEEE
Q 001665 593 LEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPVP----SSFSSINESGEFNFCGKSGVQFYTQIKTVA 668 (1035)
Q Consensus 593 ~eeAI~laN~~~~GLsasVfS~d~~~a~~~a~~l~sG~V~IN~~~~----~PfGG~g~SG~G~~~G~~g~~~ft~~k~v~ 668 (1035)
++|||+++|+++|||++||||+|.+++.++++++++|.|+||+... +||||+|.||+|+++|.+|+++||+.|++.
T Consensus 399 ~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~f~~~k~v~ 478 (481)
T TIGR03216 399 EEEVIALANDTPYGLAASVWTEDLSRAHRVARQMEVGIVWVNSWFLRDLRTPFGGSKLSGIGREGGVHSLEFYTELTNVC 478 (481)
T ss_pred HHHHHHHHhCCCccceEEEECCCHHHHHHHHHhcCccEEEECCCCCCCCCCCcCCcccCcCCcCchHHHHHHhhceEEEE
Confidence 9999999999999999999999999999999999999999997632 899999999999999999999999999986
Q ss_pred E
Q 001665 669 Q 669 (1035)
Q Consensus 669 ~ 669 (1035)
+
T Consensus 479 ~ 479 (481)
T TIGR03216 479 I 479 (481)
T ss_pred E
Confidence 5
|
Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation. |
| >cd07086 ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-87 Score=794.62 Aligned_cols=464 Identities=30% Similarity=0.459 Sum_probs=436.1
Q ss_pred eEEcCEEecCCCCCeEEeecCCCCCeEEEecCCCHHHHHHHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHHhHHHHHH
Q 001665 204 NFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAM 283 (1035)
Q Consensus 204 ~~I~G~~~~~~~~~~~~v~nP~tGevi~~v~~~s~~dv~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e~La~ 283 (1035)
+||||+|+.+. +..++++||+||+++++++.++.+++++++++|++||+.|++++.++|.++|++++++|+++.++|++
T Consensus 1 ~~i~g~~~~~~-~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~ 79 (478)
T cd07086 1 GVIGGEWVGSG-GETFTSRNPANGEPIARVFPASPEDVEAAVAAAREAFKEWRKVPAPRRGEIVRQIGEALRKKKEALGR 79 (478)
T ss_pred CcCCCEEecCC-CCEEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 58999999765 67899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCccccCCCCCCcceeeeccceeEEEECCCCcchhchHHHHHHHHh
Q 001665 284 NITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVT 363 (1035)
Q Consensus 284 ~i~~etGk~~~eA~~EV~~a~~~l~~~~~~a~~~~g~~~~~~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~ALa 363 (1035)
++++|+||++.+++.|+..+++.+++++.......+...+....+...+++++|+|||++|+|||||+.++++++++||+
T Consensus 80 ~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALa 159 (478)
T cd07086 80 LVSLEMGKILPEGLGEVQEMIDICDYAVGLSRMLYGLTIPSERPGHRLMEQWNPLGVVGVITAFNFPVAVPGWNAAIALV 159 (478)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEecceeEEEECCCCcHHHHHHHHHHHHHH
Confidence 99999999999999999999999999888776665544333223445678899999999999999999999999999999
Q ss_pred cCCEEEEeCCCCChhHHHHHHHHHHHh----CCCCCcEEEeecchhhHhhhhcCCCccEEEEeccchHHHHHHHHHHhcC
Q 001665 364 CGNTFILKPSEKNPGTSMILAALAMEA----GLPDGVLNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAARG 439 (1035)
Q Consensus 364 aGNaVVlKPS~~ap~ta~~L~ell~eA----GlP~gvv~vV~g~~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~l 439 (1035)
+||+||+|||+.+|.++..|++++.++ |+|+|+||+|+|+.+.+..|..|+++|+|+||||+.+|+.|++.+++++
T Consensus 160 aGN~VIlKps~~~p~~~~~l~~~~~~al~~~glP~gvv~~v~g~~~~~~~L~~~~~vd~v~fTGs~~~g~~i~~~aa~~~ 239 (478)
T cd07086 160 CGNTVVWKPSETTPLTAIAVTKILAEVLEKNGLPPGVVNLVTGGGDGGELLVHDPRVPLVSFTGSTEVGRRVGETVARRF 239 (478)
T ss_pred cCCeEEEECCCcchHHHHHHHHHHHHhhhccCCCccceEEEecCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccC
Confidence 999999999999999999999999999 9999999999987678888999999999999999999999999999999
Q ss_pred CceeecCCCcceEEEcCCCCHHHHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHhcccccCCCCCCCcC
Q 001665 440 KRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDASADVG 518 (1035)
Q Consensus 440 ~Pv~lElGGknp~IV~~dADld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d~~~~~G 518 (1035)
+|+++|+|||||+||++|||++.|++.|++++|+|+||.|+++++|||+++++ +|+++|+++++++++|+|.+.++++|
T Consensus 240 ~~~~lElGG~~p~iV~~dAdl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~g 319 (478)
T cd07086 240 GRVLLELGGNNAIIVMDDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESVYDEFLERLVKAYKQVRIGDPLDEGTLVG 319 (478)
T ss_pred CcEEeecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCCCcCCeEEEEcHHHHHHHHHHHHHHHHhCCcCCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999998 99999999999999999999999999
Q ss_pred CCcCHHHHHHHHHHHHHHHHCCCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecCCHHHHHH
Q 001665 519 PVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIK 598 (1035)
Q Consensus 519 pli~~~~~~rl~~~i~~av~~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI~ 598 (1035)
|++++.+++++.++|++|+++|+++++||.... ....|+|++|||+.++++++.+++||+||||++|++|+|+||||+
T Consensus 320 pli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~--~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPVl~v~~~~~~deai~ 397 (478)
T cd07086 320 PLINQAAVEKYLNAIEIAKSQGGTVLTGGKRID--GGEPGNYVEPTIVTGVTDDARIVQEETFAPILYVIKFDSLEEAIA 397 (478)
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCC--CCCCCeEEccEEecCCCCCChhhcCCCcCCEEEEEEeCCHHHHHH
Confidence 999999999999999999999999999997531 112589999999999999999999999999999999999999999
Q ss_pred HHHhcCCCcEEEEEcCCHHHHHHHHhc--cceeEEEEcCCc-----CCCCCCCCCCCCCCcCcHHHHHhcceeeEEEEe
Q 001665 599 MVNRNRFVNGASIFTSSGLAARKFQNE--IEARLVGINVPV-----PSSFSSINESGEFNFCGKSGVQFYTQIKTVAQQ 670 (1035)
Q Consensus 599 laN~~~~GLsasVfS~d~~~a~~~a~~--l~sG~V~IN~~~-----~~PfGG~g~SG~G~~~G~~g~~~ft~~k~v~~~ 670 (1035)
++|+++|||+++|||+|.+++++++++ +++|.|+||+.. .+||||+|.||+|+++|.+++++|++.|+|++.
T Consensus 398 ~~n~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~v~iN~~~~~~~~~~PfgG~~~SG~G~~~g~~~~~~f~~~k~i~~~ 476 (478)
T cd07086 398 INNDVPQGLSSSIFTEDLREAFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKETGGGRESGSDAWKQYMRRSTCTIN 476 (478)
T ss_pred HHhCCCCcceEEEEcCCHHHHHHHHhcCcccceeEEECCCCCCCCCCCCCCCcccccCCccchHHHHHHhhceEEEEEe
Confidence 999999999999999999999999999 999999999862 289999999999999999999999999999865
|
ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). |
| >PRK13473 gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-87 Score=793.45 Aligned_cols=465 Identities=26% Similarity=0.395 Sum_probs=436.4
Q ss_pred ccceEEcCEEecCCCCCeEEeecCCCCCeEEEecCCCHHHHHHHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHHhHHH
Q 001665 201 RVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDK 280 (1035)
Q Consensus 201 ~~~~~I~G~~~~~~~~~~~~v~nP~tGevi~~v~~~s~~dv~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e~ 280 (1035)
.+++||||+|+.+ ++..++++||+||+++++++.++.+++++++++|++||+.|+.++.++|.++|++++++|++++++
T Consensus 2 ~~~~~i~g~~~~~-~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 80 (475)
T PRK13473 2 QTKLLINGELVAG-EGEKQPVYNPATGEVLAEIAEASAAQVDAAVAAADAAFPEWSQTTPKERAEALLKLADAIEENADE 80 (475)
T ss_pred CccceECCEEecC-CCCEEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 4568999999875 567899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHhhcCccccCCCCCCcceeeeccceeEEEECCCCcchhchHHHHH
Q 001665 281 LAMNITVEQGTTLKAAQ-RDVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFS 359 (1035)
Q Consensus 281 La~~i~~etGk~~~eA~-~EV~~a~~~l~~~~~~a~~~~g~~~~~~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~ 359 (1035)
|++++++|+||+..++. .|+..+++.++++++.+....+........+...+++++|+|||++|+|||||+.+++++++
T Consensus 81 la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~i~ 160 (475)
T PRK13473 81 FARLESLNCGKPLHLALNDEIPAIVDVFRFFAGAARCLEGKAAGEYLEGHTSMIRRDPVGVVASIAPWNYPLMMAAWKLA 160 (475)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecceeEEEEccCChHHHHHHHHHH
Confidence 99999999999999986 48999999999998877665543222222344567889999999999999999999999999
Q ss_pred HHHhcCCEEEEeCCCCChhHHHHHHHHHHHhCCCCCcEEEeec-chhhHhhhhcCCCccEEEEeccchHHHHHHHHHHhc
Q 001665 360 IAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHG-TNDVINHICDDEDIKAISFVASSTASVQMYARAAAR 438 (1035)
Q Consensus 360 ~ALaaGNaVVlKPS~~ap~ta~~L~ell~eAGlP~gvv~vV~g-~~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~ 438 (1035)
+||++||+||+|||+.+|.++..|++++.++ +|+|++|+|+| +.+.+..|+.|++||+|+||||+.+|+.|+++++++
T Consensus 161 ~ALaaGN~VIlKps~~~p~~~~~l~~~~~~a-lP~gv~~~v~g~~~~~~~~l~~~~~vd~V~fTGs~~~g~~i~~~aa~~ 239 (475)
T PRK13473 161 PALAAGNTVVLKPSEITPLTALKLAELAADI-LPPGVLNVVTGRGATVGDALVGHPKVRMVSLTGSIATGKHVLSAAADS 239 (475)
T ss_pred HHHhcCCEEEEECCCCChHHHHHHHHHHHHh-CCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhc
Confidence 9999999999999999999999999999999 99999999999 568889999999999999999999999999999999
Q ss_pred CCceeecCCCcceEEEcCCCCHHHHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHhcccccCCCCCCCc
Q 001665 439 GKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDASADV 517 (1035)
Q Consensus 439 l~Pv~lElGGknp~IV~~dADld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d~~~~~ 517 (1035)
++|+++|+|||||+||++|||++.||+.+++++|+|+||.|+++++||||++++ +|+++|+++++++++|+|.++++++
T Consensus 240 ~~~~~lElgG~~p~iV~~dADld~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~ 319 (475)
T PRK13473 240 VKRTHLELGGKAPVIVFDDADLDAVVEGIRTFGYYNAGQDCTAACRIYAQRGIYDDLVAKLAAAVATLKVGDPDDEDTEL 319 (475)
T ss_pred CCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCC
Confidence 999999999999999999999999999999999999999999999999999998 9999999999999999999999999
Q ss_pred CCCcCHHHHHHHHHHHHHHHHCC-CcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecCCHHHH
Q 001665 518 GPVVSVEVKDQISRLIQNAVDNG-ASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEA 596 (1035)
Q Consensus 518 Gpli~~~~~~rl~~~i~~av~~G-Akvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeA 596 (1035)
|||+++.+++++.++|++++++| +++++||... ...|+|++|||+.++++++.+++||+||||++|++|+|+|||
T Consensus 320 gpli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~~----~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~dea 395 (475)
T PRK13473 320 GPLISAAHRDRVAGFVERAKALGHIRVVTGGEAP----DGKGYYYEPTLLAGARQDDEIVQREVFGPVVSVTPFDDEDQA 395 (475)
T ss_pred CCCCCHHHHHHHHHHHHHHHHcCCeEEEECCCcC----CCCceeEcCEEEecCCCCChhhhCCccCCeEEEeccCCHHHH
Confidence 99999999999999999999999 9999999742 236899999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCcEEEEEcCCHHHHHHHHhccceeEEEEcCCcC----CCCCCCCCCCCCCcCcHHHHHhcceeeEEEEec
Q 001665 597 IKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPVP----SSFSSINESGEFNFCGKSGVQFYTQIKTVAQQW 671 (1035)
Q Consensus 597 I~laN~~~~GLsasVfS~d~~~a~~~a~~l~sG~V~IN~~~~----~PfGG~g~SG~G~~~G~~g~~~ft~~k~v~~~~ 671 (1035)
|+++|+++|||+++|||+|..++.++++++++|.|+||+... +||||+|.||+|+++|.+|+++||+.|++++.|
T Consensus 396 i~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~~t~~k~i~~~~ 474 (475)
T PRK13473 396 VRWANDSDYGLASSVWTRDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKQSGYGKDMSLYGLEDYTVVRHVMVKH 474 (475)
T ss_pred HHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCccccccCccchHHHHHHHhceEEEEEec
Confidence 999999999999999999999999999999999999998632 899999999999999999999999999998876
|
|
| >cd07097 ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-87 Score=793.00 Aligned_cols=463 Identities=34% Similarity=0.510 Sum_probs=434.1
Q ss_pred cceEEcCEEecCCCCCeEEeecCC-CCCeEEEecCCCHHHHHHHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHHhHHH
Q 001665 202 VSNFIGGKFVDLRGSATIDVINPA-TQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDK 280 (1035)
Q Consensus 202 ~~~~I~G~~~~~~~~~~~~v~nP~-tGevi~~v~~~s~~dv~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e~ 280 (1035)
|++||||+|+.+.+ .++++||+ ||+++++++.++.+|++++|+.|++||+.|+.++.++|.++|++++++|+++.++
T Consensus 1 ~~~~i~g~~~~~~~--~~~v~~P~~~~~~i~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~e 78 (473)
T cd07097 1 YRNYIDGEWVAGGD--GEENRNPSDTSDVVGKYARASAEDADAAIAAAAAAFPAWRRTSPEARADILDKAGDELEARKEE 78 (473)
T ss_pred CCceECCEEecCCC--CceeECCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHH
Confidence 46899999997633 47999999 5999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCccccCCCCCCcceeeeccceeEEEECCCCcchhchHHHHHH
Q 001665 281 LAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSI 360 (1035)
Q Consensus 281 La~~i~~etGk~~~eA~~EV~~a~~~l~~~~~~a~~~~g~~~~~~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~ 360 (1035)
|++++++|+||++.+++.|+..+++.+++++.......+........+...+++++|+|||++|+|||||+.++++++++
T Consensus 79 la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~Pl~~~~~~i~~ 158 (473)
T cd07097 79 LARLLTREEGKTLPEARGEVTRAGQIFRYYAGEALRLSGETLPSTRPGVEVETTREPLGVVGLITPWNFPIAIPAWKIAP 158 (473)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEEeeeeEEEEcccChHHHHHHHHHHH
Confidence 99999999999999999999999999999988776665543332223556788999999999999999999999999999
Q ss_pred HHhcCCEEEEeCCCCChhHHHHHHHHHHHhCCCCCcEEEeecc-hhhHhhhhcCCCccEEEEeccchHHHHHHHHHHhcC
Q 001665 361 AVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGT-NDVINHICDDEDIKAISFVASSTASVQMYARAAARG 439 (1035)
Q Consensus 361 ALaaGNaVVlKPS~~ap~ta~~L~ell~eAGlP~gvv~vV~g~-~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~l 439 (1035)
||++||+||+|||+.+|.++.++++++.++|+|+|++|+|+|+ .+.+..|+.|++|++|+||||+.+|+.|++++++++
T Consensus 159 ALaaGN~VIlKps~~~p~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~ 238 (473)
T cd07097 159 ALAYGNTVVFKPAELTPASAWALVEILEEAGLPAGVFNLVMGSGSEVGQALVEHPDVDAVSFTGSTAVGRRIAAAAAARG 238 (473)
T ss_pred HHHcCCEEEEeCCCCCcHHHHHHHHHHHHcCCCCcceEEeccCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccC
Confidence 9999999999999999999999999999999999999999995 468899999999999999999999999999999999
Q ss_pred CceeecCCCcceEEEcCCCCHHHHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHhcccccCCCCCCCcC
Q 001665 440 KRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDASADVG 518 (1035)
Q Consensus 440 ~Pv~lElGGknp~IV~~dADld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d~~~~~G 518 (1035)
+|+++|+|||||+||++|||++.|++.|++++|+|+||.|+++++|||+++++ +|+++|+++++++++|+|.++++++|
T Consensus 239 ~~~~lElGGk~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~G 318 (473)
T cd07097 239 ARVQLEMGGKNPLVVLDDADLDLAVECAVQGAFFSTGQRCTASSRLIVTEGIHDRFVEALVERTKALKVGDALDEGVDIG 318 (473)
T ss_pred CcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCCeeEEEehhHHHHHHHHHHHHHHhCCCCCCCCCCCcCC
Confidence 99999999999999999999999999999999999999999999999999998 99999999999999999999999999
Q ss_pred CCcCHHHHHHHHHHHHHHHHCCCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecCCHHHHHH
Q 001665 519 PVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIK 598 (1035)
Q Consensus 519 pli~~~~~~rl~~~i~~av~~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI~ 598 (1035)
||+++.+++++.++|++++++|+++++||.... ....|+|++|||+.++++++.+++||+||||++|++|+|++|||+
T Consensus 319 pli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~--~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~ 396 (473)
T cd07097 319 PVVSERQLEKDLRYIEIARSEGAKLVYGGERLK--RPDEGYYLAPALFAGVTNDMRIAREEIFGPVAAVIRVRDYDEALA 396 (473)
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCC--CCCCCeEEeeEEeccCCCCChhhhCCCcCceEEEeccCCHHHHHH
Confidence 999999999999999999999999999996432 113589999999999999999999999999999999999999999
Q ss_pred HHHhcCCCcEEEEEcCCHHHHHHHHhccceeEEEEcCCc-----CCCCCCCCCCCCC-CcCcHHHHHhcceeeEEE
Q 001665 599 MVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPV-----PSSFSSINESGEF-NFCGKSGVQFYTQIKTVA 668 (1035)
Q Consensus 599 laN~~~~GLsasVfS~d~~~a~~~a~~l~sG~V~IN~~~-----~~PfGG~g~SG~G-~~~G~~g~~~ft~~k~v~ 668 (1035)
++|+++|||+++|||+|.+++.++++++++|.|+||++. .+||||+|.||+| +++|.+|+++|++.|+|.
T Consensus 397 ~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~g~v~iN~~~~~~~~~~PfGG~~~SG~G~~~~g~~~l~~f~~~k~v~ 472 (473)
T cd07097 397 IANDTEFGLSAGIVTTSLKHATHFKRRVEAGVVMVNLPTAGVDYHVPFGGRKGSSYGPREQGEAALEFYTTIKTVY 472 (473)
T ss_pred HHhCCCCCceEEEECCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCcccccCcccCCcHHHHHHhhceeEEe
Confidence 999999999999999999999999999999999999753 2899999999999 899999999999999985
|
Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. |
| >cd07111 ALDH_F16 Aldehyde dehydrogenase family 16A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-87 Score=794.59 Aligned_cols=471 Identities=27% Similarity=0.407 Sum_probs=445.6
Q ss_pred CCCCCCCCCCCCCCCCCCCCccceEEcCEEecCCCCCeEEeecCCCCCeEEEecCCCHHHHHHHHHHHHHhhHhhhCCCH
Q 001665 181 STPVNTSASPSGVSPNIDNNRVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPV 260 (1035)
Q Consensus 181 ~~p~~~~~~~~~~~~~~~~~~~~~~I~G~~~~~~~~~~~~v~nP~tGevi~~v~~~s~~dv~~av~~Ar~A~~~W~~~s~ 260 (1035)
|+|.+++..+.+.|++.....+++||||+|+.+..+..++++||+||+++++++.++.+++++++++|++||+.|+.++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~nP~t~~~i~~~~~a~~~~v~~ai~~A~~a~~~w~~~~~ 80 (480)
T cd07111 1 YGPAPESAACALAWLDAHDRSFGHFINGKWVKPENRKSFPTINPATGEVLASVLQAEEEDVDAAVAAARTAFESWSALPG 80 (480)
T ss_pred CCCCcchHHHHHHHhhhccccccceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCH
Confidence 68999999999999999999999999999998655678999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHhhcCccccCCCCCCcceeeeccce
Q 001665 261 ATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQR-DVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLG 339 (1035)
Q Consensus 261 ~~R~~iL~~la~~L~~~~e~La~~i~~etGk~~~eA~~-EV~~a~~~l~~~~~~a~~~~g~~~~~~~~g~~~~~~~ePlG 339 (1035)
++|.++|++++++|+++.++|++++++|+||++.+++. |+..+++.+.+++.......+ ....++|+|
T Consensus 81 ~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~-----------~~~~~~P~G 149 (480)
T cd07111 81 HVRARHLYRIARHIQKHQRLFAVLESLDNGKPIRESRDCDIPLVARHFYHHAGWAQLLDT-----------ELAGWKPVG 149 (480)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----------Ccccceecc
Confidence 99999999999999999999999999999999999974 898888888887665543321 134589999
Q ss_pred eEEEECCCCcchhchHHHHHHHHhcCCEEEEeCCCCChhHHHHHHHHHHHhCCCCCcEEEeecchhhHhhhhcCCCccEE
Q 001665 340 VCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGTNDVINHICDDEDIKAI 419 (1035)
Q Consensus 340 VV~iI~P~N~Pl~~~~~~l~~ALaaGNaVVlKPS~~ap~ta~~L~ell~eAGlP~gvv~vV~g~~e~~~~L~~h~~vd~V 419 (1035)
||++|+|||||+.++++++++||++||+||+|||+.+|.++..|++++.++|+|+|+||+|+|+.+.+..|+.|+++|.|
T Consensus 150 VV~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~l~~~~~v~~v 229 (480)
T cd07111 150 VVGQIVPWNFPLLMLAWKICPALAMGNTVVLKPAEYTPLTALLFAEICAEAGLPPGVLNIVTGNGSFGSALANHPGVDKV 229 (480)
T ss_pred eEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHhcCCCcccEEEEeCCchHHHHHhcCCCcCEE
Confidence 99999999999999999999999999999999999999999999999999999999999999977888899999999999
Q ss_pred EEeccchHHHHHHHHHHhcCCceeecCCCcceEEEcCCCCHHHHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHH
Q 001665 420 SFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDEL 498 (1035)
Q Consensus 420 ~fTGS~~vG~~I~~aAa~~l~Pv~lElGGknp~IV~~dADld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~L 498 (1035)
+||||+.+|+.|++.++++++|+++|+|||||+||++|||++.|++.|++++|+|+||.|+++++|||+++++ +|+++|
T Consensus 230 ~ftGs~~~g~~v~~~aa~~~~~~~lElGGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~a~~ri~V~~~i~d~f~~~l 309 (480)
T cd07111 230 AFTGSTEVGRALRRATAGTGKKLSLELGGKSPFIVFDDADLDSAVEGIVDAIWFNQGQVCCAGSRLLVQESVAEELIRKL 309 (480)
T ss_pred EEECCHHHHHHHHHHHhccCCcEEEEcCCCceEEECCCCCHHHHHHHHHHHHHhcCCCcCcCCceEEEcHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999998 999999
Q ss_pred HHHHHhcccccCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccc
Q 001665 499 VELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKE 578 (1035)
Q Consensus 499 v~~~~~lkvG~p~d~~~~~Gpli~~~~~~rl~~~i~~av~~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~e 578 (1035)
+++++.+++|+|.++++++||++++.+++++.++|++++++|+++++||... ...|+|++|||+.++++++.+++|
T Consensus 310 ~~~~~~~~vg~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~~~~gg~~~----~~~g~~~~Ptvl~~~~~~~~i~~e 385 (480)
T cd07111 310 KERMSHLRVGDPLDKAIDMGAIVDPAQLKRIRELVEEGRAEGADVFQPGADL----PSKGPFYPPTLFTNVPPASRIAQE 385 (480)
T ss_pred HHHHHhcCCCCCCCCCCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcC----CCCCeEEeeEEEecCCCCChhhcC
Confidence 9999999999999999999999999999999999999999999999988642 236899999999999999999999
Q ss_pred cccCcceeEEecCCHHHHHHHHHhcCCCcEEEEEcCCHHHHHHHHhccceeEEEEcCCcC----CCCCCCCCCCCCCcCc
Q 001665 579 EIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPVP----SSFSSINESGEFNFCG 654 (1035)
Q Consensus 579 EiFGPVL~V~~~~d~eeAI~laN~~~~GLsasVfS~d~~~a~~~a~~l~sG~V~IN~~~~----~PfGG~g~SG~G~~~G 654 (1035)
|+||||++|++|+|++|||+++|+++|||+++|||+|.+.+.++++++++|+|+||+... +||||+|.||+|+++|
T Consensus 386 E~FgPvl~v~~~~~~deai~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~aG~v~iN~~~~~~~~~PfGG~k~SG~G~~~g 465 (480)
T cd07111 386 EIFGPVLVVLTFRTAKEAVALANNTPYGLAASVWSENLSLALEVALSLKAGVVWINGHNLFDAAAGFGGYRESGFGREGG 465 (480)
T ss_pred CCCCCeeEeecCCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCEeeEEECCCCCCCCCCCcCCcccccCCccch
Confidence 999999999999999999999999999999999999999999999999999999998632 8999999999999999
Q ss_pred HHHHHhcceeeE
Q 001665 655 KSGVQFYTQIKT 666 (1035)
Q Consensus 655 ~~g~~~ft~~k~ 666 (1035)
++|+++||+.|+
T Consensus 466 ~~~~~~~~~~k~ 477 (480)
T cd07111 466 KEGLYEYLRPSW 477 (480)
T ss_pred HHHHHHHhhccC
Confidence 999999999875
|
Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. |
| >cd07116 ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-87 Score=790.60 Aligned_cols=465 Identities=29% Similarity=0.415 Sum_probs=430.9
Q ss_pred cceEEcCEEecCCCCCeEEeecCCCCCeEEEecCCCHHHHHHHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHHhHHHH
Q 001665 202 VSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKL 281 (1035)
Q Consensus 202 ~~~~I~G~~~~~~~~~~~~v~nP~tGevi~~v~~~s~~dv~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e~L 281 (1035)
|++||||+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++||+.|+.++.++|.++|++++++|+++.++|
T Consensus 1 ~~~~i~g~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 80 (479)
T cd07116 1 YDNFIGGEWVAPVKGEYFDNITPVTGKVFCEVPRSTAEDIELALDAAHAAKEAWGKTSVAERANILNKIADRMEANLEML 80 (479)
T ss_pred CCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 46899999998766788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHhhcCccccCCCCCCcceeeeccceeEEEECCCCcchhchHHHHHH
Q 001665 282 AMNITVEQGTTLKAAQR-DVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSI 360 (1035)
Q Consensus 282 a~~i~~etGk~~~eA~~-EV~~a~~~l~~~~~~a~~~~g~~~~~~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~ 360 (1035)
+.+++.|+||++.++.. |+..+++.++++++......+..... ..+...+++++|+|||++|+|||||+.++++++++
T Consensus 81 a~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 159 (479)
T cd07116 81 AVAETWDNGKPVRETLAADIPLAIDHFRYFAGCIRAQEGSISEI-DENTVAYHFHEPLGVVGQIIPWNFPLLMATWKLAP 159 (479)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhHHHcCCeeecC-CCCceEEEEEeccceEEEECCCchHHHHHHHHHHH
Confidence 99999999999999974 99999999999988776554433221 13334678899999999999999999999999999
Q ss_pred HHhcCCEEEEeCCCCChhHHHHHHHHHHHhCCCCCcEEEeec-chhhHhhhhcCCCccEEEEeccchHHHHHHHHHHhcC
Q 001665 361 AVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHG-TNDVINHICDDEDIKAISFVASSTASVQMYARAAARG 439 (1035)
Q Consensus 361 ALaaGNaVVlKPS~~ap~ta~~L~ell~eAGlP~gvv~vV~g-~~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~l 439 (1035)
||++||+||+|||+.+|.++..+++++.++ +|+|+||+|+| +.+.+..|+.|++|++|+||||+.+|+.|++.+++++
T Consensus 160 ALaaGN~VV~KPs~~tp~~~~~l~~l~~~a-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~ 238 (479)
T cd07116 160 ALAAGNCVVLKPAEQTPASILVLMELIGDL-LPPGVVNVVNGFGLEAGKPLASSKRIAKVAFTGETTTGRLIMQYASENI 238 (479)
T ss_pred HHHcCCEEEEECCCCChHHHHHHHHHHHHH-CCcCcEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHcCC
Confidence 999999999999999999999999999998 99999999998 4578899999999999999999999999999999999
Q ss_pred CceeecCCCcceEEEcCC------CCHHHHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHhcccccCCC
Q 001665 440 KRVQSNRGGKNYAIIMPD------ASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTD 512 (1035)
Q Consensus 440 ~Pv~lElGGknp~IV~~d------ADld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d 512 (1035)
+|+++|||||||+||++| ||++.|++.++++. +|+||.|+++++||||++++ +|+++|+++++++++|+|.+
T Consensus 239 ~p~~lElGGk~p~iV~~da~~~~~adl~~A~~~i~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~ 317 (479)
T cd07116 239 IPVTLELGGKSPNIFFADVMDADDAFFDKALEGFVMFA-LNQGEVCTCPSRALIQESIYDRFMERALERVKAIKQGNPLD 317 (479)
T ss_pred CeEEEECCCCCeEEEecCcccccccCHHHHHHHHHHHH-hcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 999999999999999988 79999999999864 69999999999999999998 89999999999999999999
Q ss_pred CCCCcCCCcCHHHHHHHHHHHHHHHHCCCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecCC
Q 001665 513 ASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADS 592 (1035)
Q Consensus 513 ~~~~~Gpli~~~~~~rl~~~i~~av~~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d 592 (1035)
+++.+||++++.+++++.++|++++++||++++||.....++...|+|++||||.++. +|.+++||+||||++|++|+|
T Consensus 318 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~-~~~~~~eE~FGPVl~v~~~~~ 396 (479)
T cd07116 318 TETMIGAQASLEQLEKILSYIDIGKEEGAEVLTGGERNELGGLLGGGYYVPTTFKGGN-KMRIFQEEIFGPVLAVTTFKD 396 (479)
T ss_pred CCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCCCeeecCeEEccCC-CChhhhcCCcCceEEEEEeCC
Confidence 9999999999999999999999999999999999975322222468999999999875 999999999999999999999
Q ss_pred HHHHHHHHHhcCCCcEEEEEcCCHHHHHHHHhccceeEEEEcCCcC----CCCCCCCCCCCCCcCcHHHHHhcceeeEEE
Q 001665 593 LEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPVP----SSFSSINESGEFNFCGKSGVQFYTQIKTVA 668 (1035)
Q Consensus 593 ~eeAI~laN~~~~GLsasVfS~d~~~a~~~a~~l~sG~V~IN~~~~----~PfGG~g~SG~G~~~G~~g~~~ft~~k~v~ 668 (1035)
+||||+++|+++|||+++|||+|.++++++++++++|.|+||+... +||||+|.||+|+++|++++++|++.|++.
T Consensus 397 ~~eai~~aN~~~~gLsa~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~~~ 476 (479)
T cd07116 397 EEEALEIANDTLYGLGAGVWTRDGNTAYRMGRGIQAGRVWTNCYHLYPAHAAFGGYKQSGIGRENHKMMLDHYQQTKNLL 476 (479)
T ss_pred HHHHHHHHhCCcccceEEEEcCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCcCCCccCcCCccChHHHHHHhhceEEEE
Confidence 9999999999999999999999999999999999999999997532 899999999999999999999999999987
Q ss_pred Ee
Q 001665 669 QQ 670 (1035)
Q Consensus 669 ~~ 670 (1035)
++
T Consensus 477 ~~ 478 (479)
T cd07116 477 VS 478 (479)
T ss_pred Ee
Confidence 53
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression. |
| >cd07130 ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-86 Score=787.61 Aligned_cols=459 Identities=27% Similarity=0.411 Sum_probs=427.9
Q ss_pred EEcCEEecCCCCCeEEeecCCCCCeEEEecCCCHHHHHHHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHHhHHHHHHH
Q 001665 205 FIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMN 284 (1035)
Q Consensus 205 ~I~G~~~~~~~~~~~~v~nP~tGevi~~v~~~s~~dv~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e~La~~ 284 (1035)
+|||+|+.+ +..++++||+||+++++++.++.+++++++++|++||+.|+.++.++|.++|++++++|+++.++|+++
T Consensus 2 ~i~g~~~~~--~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~ 79 (474)
T cd07130 2 VYDGEWGGG--GGVVTSISPANGEPIARVRQATPEDYESTIKAAQEAFKEWRDVPAPKRGEIVRQIGDALRKKKEALGKL 79 (474)
T ss_pred eECCEEecC--CCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 799999975 467999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCccccCCCCCCcceeeeccceeEEEECCCCcchhchHHHHHHHHhc
Q 001665 285 ITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTC 364 (1035)
Q Consensus 285 i~~etGk~~~eA~~EV~~a~~~l~~~~~~a~~~~g~~~~~~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~ALaa 364 (1035)
+++|+||++.+++.|+..+++.++++++......+...+....+...+.+++|+|||++|+|||||+.++++++++||++
T Consensus 80 ~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaa 159 (474)
T cd07130 80 VSLEMGKILPEGLGEVQEMIDICDFAVGLSRQLYGLTIPSERPGHRMMEQWNPLGVVGVITAFNFPVAVWGWNAAIALVC 159 (474)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHhcCccccCCCCCceEEEEEecceeEEEEccCCCHHHHHHHHhhHHHHc
Confidence 99999999999999999999999998877665544433322234455778999999999999999999999999999999
Q ss_pred CCEEEEeCCCCChhHHHHHHHH----HHHhCCCCCcEEEeecchhhHhhhhcCCCccEEEEeccchHHHHHHHHHHhcCC
Q 001665 365 GNTFILKPSEKNPGTSMILAAL----AMEAGLPDGVLNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAARGK 440 (1035)
Q Consensus 365 GNaVVlKPS~~ap~ta~~L~el----l~eAGlP~gvv~vV~g~~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~l~ 440 (1035)
||+||+|||+.+|.++.+|+++ |.++|+|+|++|+|+|+.+.+..|+.|++||+|+||||+.+|+.|++.++++++
T Consensus 160 GN~VvlKps~~~p~~~~~l~~l~~~~~~~aglP~gv~~~v~g~~~~~~~L~~~~~vd~V~fTGs~~~g~~i~~~aa~~~~ 239 (474)
T cd07130 160 GNVVVWKPSPTTPLTAIAVTKIVARVLEKNGLPGAIASLVCGGADVGEALVKDPRVPLVSFTGSTAVGRQVGQAVAARFG 239 (474)
T ss_pred CCeEEeeCCccCHHHHHHHHHHHHHHHHhcCCCCCcEEEEeCChhHHHHHhcCCCCCEEEEECchHHHHHHHHHHHhcCC
Confidence 9999999999999999887776 468999999999999987888999999999999999999999999999999999
Q ss_pred ceeecCCCcceEEEcCCCCHHHHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHhcccccCCCCCCCcCC
Q 001665 441 RVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDASADVGP 519 (1035)
Q Consensus 441 Pv~lElGGknp~IV~~dADld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d~~~~~Gp 519 (1035)
|+++|+|||||+||++|||++.|++.|++++|.|+||.|+++++|||+++++ +|+++|+++++++++|+|.++++++||
T Consensus 240 ~~~lElGGk~p~iV~~dadl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gp 319 (474)
T cd07130 240 RSLLELGGNNAIIVMEDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESIYDEVLERLKKAYKQVRIGDPLDDGTLVGP 319 (474)
T ss_pred CEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEcHhHHHHHHHHHHHHHhcCCcCCCCCCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999998 999999999999999999999999999
Q ss_pred CcCHHHHHHHHHHHHHHHHCCCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecCCHHHHHHH
Q 001665 520 VVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKM 599 (1035)
Q Consensus 520 li~~~~~~rl~~~i~~av~~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI~l 599 (1035)
++++.+++++.++|++|+++||++++||... ...|+|++||||.++.+ |.+++||+||||++|++|+|++|||++
T Consensus 320 li~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~----~~~g~~~~PTvl~~~~~-~~i~~eE~FGPvl~v~~~~~~~eai~~ 394 (474)
T cd07130 320 LHTKAAVDNYLAAIEEAKSQGGTVLFGGKVI----DGPGNYVEPTIVEGLSD-APIVKEETFAPILYVLKFDTLEEAIAW 394 (474)
T ss_pred CcCHHHHHHHHHHHHHHHHCCCEEEECCCcC----CCCCeEEccEEEecCCC-CHHHhCCCcCCeEEEEEeCCHHHHHHH
Confidence 9999999999999999999999999999752 23589999999998766 999999999999999999999999999
Q ss_pred HHhcCCCcEEEEEcCCHHHHHHHHhc--cceeEEEEcCCc-----CCCCCCCCCCCCCCcCcHHHHHhcceeeEEEEe
Q 001665 600 VNRNRFVNGASIFTSSGLAARKFQNE--IEARLVGINVPV-----PSSFSSINESGEFNFCGKSGVQFYTQIKTVAQQ 670 (1035)
Q Consensus 600 aN~~~~GLsasVfS~d~~~a~~~a~~--l~sG~V~IN~~~-----~~PfGG~g~SG~G~~~G~~g~~~ft~~k~v~~~ 670 (1035)
+|+++|||+++|||+|.+++++++++ +++|.|+||... .+||||+|.||+|+++|++++++|++.|++.+.
T Consensus 395 aN~~~~gL~a~v~t~d~~~a~~~~~~~~~~~g~v~iN~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~f~~~k~~~~~ 472 (474)
T cd07130 395 NNEVPQGLSSSIFTTDLRNAFRWLGPKGSDCGIVNVNIGTSGAEIGGAFGGEKETGGGRESGSDAWKQYMRRSTCTIN 472 (474)
T ss_pred HhCCCCCceEEEEcCCHHHHHHHHhhcCcceEEEEEcCCCCCCCCCCCcCccccccCCccchHHHHHHHhheEEEEEe
Confidence 99999999999999999999999986 999999999742 289999999999999999999999999998764
|
Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. |
| >cd07141 ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-87 Score=789.89 Aligned_cols=465 Identities=32% Similarity=0.450 Sum_probs=435.3
Q ss_pred CccceEEcCEEecCCCCCeEEeecCCCCCeEEEecCCCHHHHHHHHHHHHHhhH---hhhCCCHHHHHHHHHHHHHHHHH
Q 001665 200 NRVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFP---AWKNTPVATRQRIMFKLQELIRR 276 (1035)
Q Consensus 200 ~~~~~~I~G~~~~~~~~~~~~v~nP~tGevi~~v~~~s~~dv~~av~~Ar~A~~---~W~~~s~~~R~~iL~~la~~L~~ 276 (1035)
..+++||||+|+.+.++..++++||+||+++++++.++.++++++++.|++||+ .|+.++.++|.++|++++++|++
T Consensus 5 ~~~~~~I~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~W~~~~~~~R~~~L~~~a~~l~~ 84 (481)
T cd07141 5 KYTKIFINNEWHDSVSGKTFPTINPATGEKICEVQEGDKADVDKAVKAARAAFKLGSPWRTMDASERGRLLNKLADLIER 84 (481)
T ss_pred ccccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhccCccccCCHHHHHHHHHHHHHHHHH
Confidence 345689999999876678899999999999999999999999999999999998 69999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHhhcCccccCCCCCCcceeeeccceeEEEECCCCcchhchH
Q 001665 277 DIDKLAMNITVEQGTTLKAA-QRDVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPL 355 (1035)
Q Consensus 277 ~~e~La~~i~~etGk~~~eA-~~EV~~a~~~l~~~~~~a~~~~g~~~~~~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~ 355 (1035)
+.++|++++++|+||++.++ ..|+..+++.++++++.+....+...+.. .+...+.+++|+|||++|+|||||+.+++
T Consensus 85 ~~~~la~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~-~~~~~~~~~~P~GVv~~I~p~N~P~~~~~ 163 (481)
T cd07141 85 DRAYLASLETLDNGKPFSKSYLVDLPGAIKVLRYYAGWADKIHGKTIPMD-GDFFTYTRHEPVGVCGQIIPWNFPLLMAA 163 (481)
T ss_pred hHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhcCceecCC-CCceEEEEEeceeEEEEEccChhHHHHHH
Confidence 99999999999999999766 46999999999999887776655433321 22346788999999999999999999999
Q ss_pred HHHHHHHhcCCEEEEeCCCCChhHHHHHHHHHHHhCCCCCcEEEeecc-hhhHhhhhcCCCccEEEEeccchHHHHHHHH
Q 001665 356 WMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGT-NDVINHICDDEDIKAISFVASSTASVQMYAR 434 (1035)
Q Consensus 356 ~~l~~ALaaGNaVVlKPS~~ap~ta~~L~ell~eAGlP~gvv~vV~g~-~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~a 434 (1035)
+++++||++||+||+|||+.+|.++..|+++|.++|+|+|+||+|+|+ .+.+..|+.|++||+|+||||+.+|+.|++.
T Consensus 164 ~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~ 243 (481)
T cd07141 164 WKLAPALACGNTVVLKPAEQTPLTALYLASLIKEAGFPPGVVNVVPGYGPTAGAAISSHPDIDKVAFTGSTEVGKLIQQA 243 (481)
T ss_pred HHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999995 4678899999999999999999999999999
Q ss_pred HHh-cCCceeecCCCcceEEEcCCCCHHHHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHhcccccCCC
Q 001665 435 AAA-RGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTD 512 (1035)
Q Consensus 435 Aa~-~l~Pv~lElGGknp~IV~~dADld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d 512 (1035)
++. +++|+++|+|||||+||++|||++.|++.|++++|+++||.|+++++|||+++++ +|+++|++.++++++|+|.+
T Consensus 244 aa~~~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~ 323 (481)
T cd07141 244 AGKSNLKRVTLELGGKSPNIVFADADLDYAVEQAHEALFFNMGQCCCAGSRTFVQESIYDEFVKRSVERAKKRVVGNPFD 323 (481)
T ss_pred hhhhcCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 887 8999999999999999999999999999999999999999999999999999998 89999999999999999999
Q ss_pred CCCCcCCCcCHHHHHHHHHHHHHHHHCCCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecCC
Q 001665 513 ASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADS 592 (1035)
Q Consensus 513 ~~~~~Gpli~~~~~~rl~~~i~~av~~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d 592 (1035)
+++++|||+++.+++++.++|++++++||++++||... ...|+|++|||+.++++++++++||+||||++|++|+|
T Consensus 324 ~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~----~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~ 399 (481)
T cd07141 324 PKTEQGPQIDEEQFKKILELIESGKKEGAKLECGGKRH----GDKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIFKFKT 399 (481)
T ss_pred CCCCCcCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcC----CCCCeEEeeEEEecCCCCChhhhccccCCeEEEEeeCC
Confidence 99999999999999999999999999999999999742 23689999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCcEEEEEcCCHHHHHHHHhccceeEEEEcCCcC----CCCCCCCCCCCCCcCcHHHHHhcceeeEEE
Q 001665 593 LEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPVP----SSFSSINESGEFNFCGKSGVQFYTQIKTVA 668 (1035)
Q Consensus 593 ~eeAI~laN~~~~GLsasVfS~d~~~a~~~a~~l~sG~V~IN~~~~----~PfGG~g~SG~G~~~G~~g~~~ft~~k~v~ 668 (1035)
++|||+++|+.+|||++||||+|.+++.++++++++|+|+||++.. +||||+|.||+|+++|.+++++||+.|+++
T Consensus 400 ~~eai~~~n~~~~gLs~~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~ 479 (481)
T cd07141 400 IDEVIERANNTTYGLAAAVFTKDIDKAITFSNALRAGTVWVNCYNVVSPQAPFGGYKMSGNGRELGEYGLQEYTEVKTVT 479 (481)
T ss_pred HHHHHHHHhCCCccceEEEECCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCCCCcccCcCCccchHHHHHHHhheEEEE
Confidence 9999999999999999999999999999999999999999998632 899999999999999999999999999986
Q ss_pred E
Q 001665 669 Q 669 (1035)
Q Consensus 669 ~ 669 (1035)
+
T Consensus 480 ~ 480 (481)
T cd07141 480 I 480 (481)
T ss_pred E
Confidence 5
|
NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. |
| >cd07119 ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-86 Score=790.35 Aligned_cols=466 Identities=32% Similarity=0.497 Sum_probs=436.4
Q ss_pred EEcCEEecCCCCCeEEeecCCCCCeEEEecCCCHHHHHHHHHHHHHhhH--hhhCCCHHHHHHHHHHHHHHHHHhHHHHH
Q 001665 205 FIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFP--AWKNTPVATRQRIMFKLQELIRRDIDKLA 282 (1035)
Q Consensus 205 ~I~G~~~~~~~~~~~~v~nP~tGevi~~v~~~s~~dv~~av~~Ar~A~~--~W~~~s~~~R~~iL~~la~~L~~~~e~La 282 (1035)
||||+|+.+.++..++++||+||+++++++.++.++++++++.|++||+ .|+.++.++|.++|++++++|++++++|+
T Consensus 1 ~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la 80 (482)
T cd07119 1 YIDGEWVEAASGKTRDIINPANGEVIATVPEGTAEDAKRAIAAARRAFDSGEWPHLPAQERAALLFRIADKIREDAEELA 80 (482)
T ss_pred CCCCEEecCCCCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 6899998765667899999999999999999999999999999999997 59999999999999999999999999999
Q ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCccccCCCCCCcceeeeccceeEEEECCCCcchhchHHHHHHHH
Q 001665 283 MNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAV 362 (1035)
Q Consensus 283 ~~i~~etGk~~~eA~~EV~~a~~~l~~~~~~a~~~~g~~~~~~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~AL 362 (1035)
+++++|+||++.+++.|+..+++.+++++.......+..... ..+...+++++|+|||++|+|||||+.+.++++++||
T Consensus 81 ~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~AL 159 (482)
T cd07119 81 RLETLNTGKTLRESEIDIDDVANCFRYYAGLATKETGEVYDV-PPHVISRTVREPVGVCGLITPWNYPLLQAAWKLAPAL 159 (482)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccC-CCCceEEEEEeeeeeEEEEcCCchHHHHHHHHHHHHH
Confidence 999999999999999999999999999988776654443322 2344567899999999999999999999999999999
Q ss_pred hcCCEEEEeCCCCChhHHHHHHHHHHHhCCCCCcEEEeecch-hhHhhhhcCCCccEEEEeccchHHHHHHHHHHhcCCc
Q 001665 363 TCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGTN-DVINHICDDEDIKAISFVASSTASVQMYARAAARGKR 441 (1035)
Q Consensus 363 aaGNaVVlKPS~~ap~ta~~L~ell~eAGlP~gvv~vV~g~~-e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~l~P 441 (1035)
++||+||+|||+.+|.++.+|+++|.++|+|+|++|+|+|+. +.+..|+.|+++++|+||||+.+|+.|+++++++++|
T Consensus 160 aaGN~VilKps~~~p~~~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~ 239 (482)
T cd07119 160 AAGNTVVIKPSEVTPLTTIALFELIEEAGLPAGVVNLVTGSGATVGAELAESPDVDLVSFTGGTATGRSIMRAAAGNVKK 239 (482)
T ss_pred hcCCEEEEECCccccHHHHHHHHHHHHcCCCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCc
Confidence 999999999999999999999999999999999999999865 5789999999999999999999999999999999999
Q ss_pred eeecCCCcceEEEcCCCCHHHHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHhcccccCCCCCCCcCCC
Q 001665 442 VQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDASADVGPV 520 (1035)
Q Consensus 442 v~lElGGknp~IV~~dADld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d~~~~~Gpl 520 (1035)
+++|+|||||+||++|||++.|++.|++++|+++||.|+++++|||+++++ +|+++|+++++++++|+|.++++++||+
T Consensus 240 ~~lElGGkn~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~~~~~~~~~gpl 319 (482)
T cd07119 240 VALELGGKNPNIVFADADFETAVDQALNGVFFNAGQVCSAGSRLLVEESIHDKFVAALAERAKKIKLGNGLDADTEMGPL 319 (482)
T ss_pred EEEECCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCCC
Confidence 999999999999999999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred cCHHHHHHHHHHHHHHHHCCCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecCCHHHHHHHH
Q 001665 521 VSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMV 600 (1035)
Q Consensus 521 i~~~~~~rl~~~i~~av~~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI~la 600 (1035)
+++.+++++.++|++++++||++++||..........|+|++|||+.++++++.+++||+||||++|++|+|+||||+++
T Consensus 320 i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~deai~~~ 399 (482)
T cd07119 320 VSAEHREKVLSYIQLGKEEGARLVCGGKRPTGDELAKGYFVEPTIFDDVDRTMRIVQEEIFGPVLTVERFDTEEEAIRLA 399 (482)
T ss_pred CCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCceECCEEEecCCCCChHhhCCCCCceEEEeccCCHHHHHHHH
Confidence 99999999999999999999999999974321112368999999999999999999999999999999999999999999
Q ss_pred HhcCCCcEEEEEcCCHHHHHHHHhccceeEEEEcCCcC----CCCCCCCCCCCCCcCcHHHHHhcceeeEEEEec
Q 001665 601 NRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPVP----SSFSSINESGEFNFCGKSGVQFYTQIKTVAQQW 671 (1035)
Q Consensus 601 N~~~~GLsasVfS~d~~~a~~~a~~l~sG~V~IN~~~~----~PfGG~g~SG~G~~~G~~g~~~ft~~k~v~~~~ 671 (1035)
|+++|||++||||+|.+.+.++++++++|.|+||+... +||||+|.||+|+++|++|+++||+.|+++..+
T Consensus 400 n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~v~~~~ 474 (482)
T cd07119 400 NDTPYGLAGAVWTKDIARANRVARRLRAGTVWINDYHPYFAEAPWGGYKQSGIGRELGPTGLEEYQETKHININL 474 (482)
T ss_pred hCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCcccCcCCccchHHHHHHHhceEEEEEec
Confidence 99999999999999999999999999999999998632 899999999999999999999999999998764
|
Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. |
| >cd07144 ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-86 Score=786.22 Aligned_cols=468 Identities=31% Similarity=0.453 Sum_probs=435.2
Q ss_pred ccceEEcCEEecCCCCCeEEeecCCCCCeEEEecCCCHHHHHHHHHHHHHhhHh-hhCCCHHHHHHHHHHHHHHHHHhHH
Q 001665 201 RVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPA-WKNTPVATRQRIMFKLQELIRRDID 279 (1035)
Q Consensus 201 ~~~~~I~G~~~~~~~~~~~~v~nP~tGevi~~v~~~s~~dv~~av~~Ar~A~~~-W~~~s~~~R~~iL~~la~~L~~~~e 279 (1035)
.+++||||+|+.+.++..++++||+||+++++++.++.+++++++++|++||+. |+.++.++|.++|++++++|+++.+
T Consensus 7 ~~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~ai~~A~~A~~~~w~~~~~~~R~~iL~~~a~~l~~~~~ 86 (484)
T cd07144 7 PTGLFINNEFVKSSDGETIKTVNPSTGEVIASVYAAGEEDVDKAVKAARKAFESWWSKVTGEERGELLDKLADLVEKNRD 86 (484)
T ss_pred CcCcEECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHhhHhcCCHHHHHHHHHHHHHHHHHhHH
Confidence 356899999998755678999999999999999999999999999999999996 8899999999999999999999999
Q ss_pred HHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHhhcCccccCCCCCCcceeeeccceeEEEECCCCcchhchHHHH
Q 001665 280 KLAMNITVEQGTTLKAA-QRDVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMF 358 (1035)
Q Consensus 280 ~La~~i~~etGk~~~eA-~~EV~~a~~~l~~~~~~a~~~~g~~~~~~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l 358 (1035)
+|++++++|+||+..++ ..|+..+++.++++++++....+...+.. .+...+..++|+|||++|+|||||+.++++++
T Consensus 87 ~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~g~~~~~~-~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~ 165 (484)
T cd07144 87 LLAAIEALDSGKPYHSNALGDLDEIIAVIRYYAGWADKIQGKTIPTS-PNKLAYTLHEPYGVCGQIIPWNYPLAMAAWKL 165 (484)
T ss_pred HHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCceecCC-CCceEEEEEecceEEEEECcCCCHHHHHHHHH
Confidence 99999999999998765 67999999999999987766655433321 33445788999999999999999999999999
Q ss_pred HHHHhcCCEEEEeCCCCChhHHHHHHHHHHHhCCCCCcEEEeecc-hhhHhhhhcCCCccEEEEeccchHHHHHHHHHHh
Q 001665 359 SIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGT-NDVINHICDDEDIKAISFVASSTASVQMYARAAA 437 (1035)
Q Consensus 359 ~~ALaaGNaVVlKPS~~ap~ta~~L~ell~eAGlP~gvv~vV~g~-~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~ 437 (1035)
++||++||+||+|||+.+|.++..|.++|.++|+|+|+||+|+|+ .+.+..|+.|+++|+|+||||+.+|+.|+++|++
T Consensus 166 ~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~vd~V~fTGS~~~g~~i~~~a~~ 245 (484)
T cd07144 166 APALAAGNTVVIKPAENTPLSLLYFANLVKEAGFPPGVVNIIPGYGAVAGSALAEHPDVDKIAFTGSTATGRLVMKAAAQ 245 (484)
T ss_pred HHHHHcCCEEEEECCccchHHHHHHHHHHHHhCcCCCcEEEEecCCchHHHHHhcCCCcCEEEEECcHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999984 5788999999999999999999999999999999
Q ss_pred cCCceeecCCCcceEEEcCCCCHHHHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHh-cccccCCCCCC
Q 001665 438 RGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKA-LKVNVGTDASA 515 (1035)
Q Consensus 438 ~l~Pv~lElGGknp~IV~~dADld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~-lkvG~p~d~~~ 515 (1035)
+++|+++|+|||||+||++|||++.|++.|++++|+|+||.|+++++||||++++ +|+++|++++++ +++|+|.++++
T Consensus 246 ~~~~~~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~G~p~~~~~ 325 (484)
T cd07144 246 NLKAVTLECGGKSPALVFEDADLDQAVKWAAAGIMYNSGQNCTATSRIYVQESIYDKFVEKFVEHVKQNYKVGSPFDDDT 325 (484)
T ss_pred cCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceEEEcHHHHHHHHHHHHHHHHhhCCcCCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999998 999999999985 89999999999
Q ss_pred CcCCCcCHHHHHHHHHHHHHHHHCCCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecCCHHH
Q 001665 516 DVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEE 595 (1035)
Q Consensus 516 ~~Gpli~~~~~~rl~~~i~~av~~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~ee 595 (1035)
++||++++.+++++.++|++++++|+++++||..... ....|+|++|||+.++++++.+++||+||||++|++|+|++|
T Consensus 326 ~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~-~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~e 404 (484)
T cd07144 326 VVGPQVSKTQYDRVLSYIEKGKKEGAKLVYGGEKAPE-GLGKGYFIPPTIFTDVPQDMRIVKEEIFGPVVVISKFKTYEE 404 (484)
T ss_pred cCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCcc-cCCCCceECCEEEeCCCCCCchhhCCCCCceEEEeccCCHHH
Confidence 9999999999999999999999999999999875321 123689999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCcEEEEEcCCHHHHHHHHhccceeEEEEcCCcC----CCCCCCCCCCCCCcCcHHHHHhcceeeEEEEe
Q 001665 596 AIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPVP----SSFSSINESGEFNFCGKSGVQFYTQIKTVAQQ 670 (1035)
Q Consensus 596 AI~laN~~~~GLsasVfS~d~~~a~~~a~~l~sG~V~IN~~~~----~PfGG~g~SG~G~~~G~~g~~~ft~~k~v~~~ 670 (1035)
||+++|+.+|||++||||+|.+.+.+|++++++|+|+||+... +||||+|.||+|+++|.+|+++||+.|+|+..
T Consensus 405 ai~~~n~~~~gLsa~i~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~ 483 (484)
T cd07144 405 AIKKANDTTYGLAAAVFTKDIRRAHRVARELEAGMVWINSSNDSDVGVPFGGFKMSGIGRELGEYGLETYTQTKAVHIN 483 (484)
T ss_pred HHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcCEEEECCCCCCCCCCCcCCcccCcCCCCchHHHHHHhhceEEEEEe
Confidence 9999999999999999999999999999999999999998632 89999999999999999999999999999764
|
NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. |
| >TIGR01722 MMSDH methylmalonic acid semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-86 Score=783.83 Aligned_cols=469 Identities=47% Similarity=0.805 Sum_probs=438.7
Q ss_pred ceEEcCEEecCCCCCeEEeecCCCCCeEEEecCCCHHHHHHHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHHhHHHHH
Q 001665 203 SNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLA 282 (1035)
Q Consensus 203 ~~~I~G~~~~~~~~~~~~v~nP~tGevi~~v~~~s~~dv~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e~La 282 (1035)
++||||+|+.+.++..++++||+||+++++++.++.++++++++.|++||+.|+.++.++|.++|+++++.|+++.++|+
T Consensus 2 ~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~ai~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 81 (477)
T TIGR01722 2 NHWIGGKFAEGASGTYIPVTNPATNEVTTKVAFASVDEVDAAVASARETFLTWGQTSLAQRTSVLLRYQALLKEHRDEIA 81 (477)
T ss_pred ceeECCEEecCCCCCeEeeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 57999999977666789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCccccCCCCCCcceeeeccceeEEEECCCCcchhchHHHHHHHH
Q 001665 283 MNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAV 362 (1035)
Q Consensus 283 ~~i~~etGk~~~eA~~EV~~a~~~l~~~~~~a~~~~g~~~~~~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~AL 362 (1035)
++++.|+||++.+++.|+..+++.+++++.......+........+...+.+++|+|||++|+|||||+.++++++++||
T Consensus 82 ~~~~~e~Gk~~~~a~~ev~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL 161 (477)
T TIGR01722 82 ELITAEHGKTHSDALGDVARGLEVVEHACGVNSLLKGETSTQVATRVDVYSIRQPLGVCAGITPFNFPAMIPLWMFPIAI 161 (477)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEcccceEEEEccCChHHHHHHHHHHHHH
Confidence 99999999999999999999999999988877766555433222344567789999999999999999999999999999
Q ss_pred hcCCEEEEeCCCCChhHHHHHHHHHHHhCCCCCcEEEeecchhhHhhhhcCCCccEEEEeccchHHHHHHHHHHhcCCce
Q 001665 363 TCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRV 442 (1035)
Q Consensus 363 aaGNaVVlKPS~~ap~ta~~L~ell~eAGlP~gvv~vV~g~~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~l~Pv 442 (1035)
++||+||+|||+.+|.++..|+++|.++|+|+|++|+|+|+.+.+..|+.|++|+.|+||||+.+|+.|.+.++..++|+
T Consensus 162 aaGN~VilKps~~~p~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~L~~~~~v~~V~ftGS~~~g~~v~~~a~~~~~~v 241 (477)
T TIGR01722 162 ACGNTFVLKPSEKVPSAAVKLAELFSEAGAPDGVLNVVHGDKEAVDRLLEHPDVKAVSFVGSTPIGRYIHTTGSAHGKRV 241 (477)
T ss_pred hcCCEEEeeCcccChHHHHHHHHHHHHhCcCCCeEEEEeCCHHHHHHHHcCCCcCEEEEECCHHHHHHHHHHHHhcCCeE
Confidence 99999999999999999999999999999999999999998788899999999999999999999999999999999999
Q ss_pred eecCCCcceEEEcCCCCHHHHHHHHHHHHhccCCCCccCCceEEEeCccHHHHHHHHHHHHhcccccCCCCCCCcCCCcC
Q 001665 443 QSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWEDELVELAKALKVNVGTDASADVGPVVS 522 (1035)
Q Consensus 443 ~lElGGknp~IV~~dADld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~~f~e~Lv~~~~~lkvG~p~d~~~~~Gpli~ 522 (1035)
++|+|||||+||++|||++.|++.+++++|.|+||.|+++++|||++++.+|+++|+++++++++|+|.++++++||+++
T Consensus 242 ~lElGG~n~~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~rl~v~~~~~~f~~~l~~~~~~~~~G~~~~~~~~~Gp~i~ 321 (477)
T TIGR01722 242 QALGGAKNHMVVMPDADKDAAADALVGAAYGAAGQRCMAISAAVLVGAADEWVPEIRERAEKIRIGPGDDPGAEMGPLIT 321 (477)
T ss_pred EEECCCCCceEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEeCcHHHHHHHHHHHHhcCCCCCCCCCCCCcCCCcC
Confidence 99999999999999999999999999999999999999999999998876899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHCCCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecCCHHHHHHHHHh
Q 001665 523 VEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNR 602 (1035)
Q Consensus 523 ~~~~~rl~~~i~~av~~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI~laN~ 602 (1035)
+.+++++.++|++++++|+++++||......+...|.|++|||+.++++++.+++||+||||++|++|+|++|||+++|+
T Consensus 322 ~~~~~~~~~~i~~a~~~Ga~il~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~V~~~~~~~eai~~~n~ 401 (477)
T TIGR01722 322 PQAKDRVASLIAGGAAEGAEVLLDGRGYKVDGYEEGNWVGPTLLERVPPTMKAYQEEIFGPVLCVLEADTLEEAIALINA 401 (477)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCCCeEECCEEeeCCCCCChhhhCCCCCCeEEEEEeCCHHHHHHHHhC
Confidence 99999999999999999999999997532222346899999999999999999999999999999999999999999999
Q ss_pred cCCCcEEEEEcCCHHHHHHHHhccceeEEEEcCCc----C-CCCCCCCCCCCC--CcCcHHHHHhcceeeEEEEec
Q 001665 603 NRFVNGASIFTSSGLAARKFQNEIEARLVGINVPV----P-SSFSSINESGEF--NFCGKSGVQFYTQIKTVAQQW 671 (1035)
Q Consensus 603 ~~~GLsasVfS~d~~~a~~~a~~l~sG~V~IN~~~----~-~PfGG~g~SG~G--~~~G~~g~~~ft~~k~v~~~~ 671 (1035)
++|||+++|||+|.+.+++++.++++|.|+||++. . +||||+|.||+| +++|.+++++||+.|++++.|
T Consensus 402 ~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~k~SG~G~~~~~g~~~l~~~~~~k~i~~~~ 477 (477)
T TIGR01722 402 SPYGNGTAIFTRDGAAARRFQHEIEVGQVGVNVPIPVPLPYFSFTGWKDSFFGDHHIYGKQGTHFYTRGKTVTTRW 477 (477)
T ss_pred CCCCCeEEEEcCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCCCCccccccCCCCccChHHHHHHhcCeeEEEEeC
Confidence 99999999999999999999999999999999753 1 799999999999 578999999999999998754
|
In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus. |
| >cd07131 ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-86 Score=785.11 Aligned_cols=467 Identities=35% Similarity=0.587 Sum_probs=436.5
Q ss_pred eEEcCEEecCCCCCeEEeecCCC-CCeEEEecCCCHHHHHHHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHHhHHHHH
Q 001665 204 NFIGGKFVDLRGSATIDVINPAT-QEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLA 282 (1035)
Q Consensus 204 ~~I~G~~~~~~~~~~~~v~nP~t-Gevi~~v~~~s~~dv~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e~La 282 (1035)
+||||+|+.+.++..++++||+| ++++++++.++.+|+++++++|++||+.|+.++.++|.++|++++++|+++.++|+
T Consensus 1 ~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~ela 80 (478)
T cd07131 1 NYIGGEWVDSASGETFDSRNPADLEEVVGTFPLSTASDVDAAVEAAREAFPEWRKVPAPRRAEYLFRAAELLKKRKEELA 80 (478)
T ss_pred CcCCCEeecCCCCCeEEEECCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 48999999765678899999998 68999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCccccCCCCCCcceeeeccceeEEEECCCCcchhchHHHHHHHH
Q 001665 283 MNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAV 362 (1035)
Q Consensus 283 ~~i~~etGk~~~eA~~EV~~a~~~l~~~~~~a~~~~g~~~~~~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~AL 362 (1035)
+++++|+||++.+++.|+..+++.+++++...+...+........+...+.+++|+|||++|+|||||+.++++++++||
T Consensus 81 ~~~~~e~Gk~~~~~~~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~AL 160 (478)
T cd07131 81 RLVTREMGKPLAEGRGDVQEAIDMAQYAAGEGRRLFGETVPSELPNKDAMTRRQPIGVVALITPWNFPVAIPSWKIFPAL 160 (478)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceEEEEeeceeEEEEECCcCcHHHHHHHHHHHHH
Confidence 99999999999999999999999999988877666554433323344568899999999999999999999999999999
Q ss_pred hcCCEEEEeCCCCChhHHHHHHHHHHHhCCCCCcEEEeecch-hhHhhhhcCCCccEEEEeccchHHHHHHHHHHhcCCc
Q 001665 363 TCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGTN-DVINHICDDEDIKAISFVASSTASVQMYARAAARGKR 441 (1035)
Q Consensus 363 aaGNaVVlKPS~~ap~ta~~L~ell~eAGlP~gvv~vV~g~~-e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~l~P 441 (1035)
++||+||+|||+.+|.++..|+++|.++|+|+|+||+|+|.. +.+..|+.|++||+|+||||+.+|+.|++.++++++|
T Consensus 161 aaGN~VvlKps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~ 240 (478)
T cd07131 161 VCGNTVVFKPAEDTPACALKLVELFAEAGLPPGVVNVVHGRGEEVGEALVEHPDVDVVSFTGSTEVGERIGETCARPNKR 240 (478)
T ss_pred HcCCEEEEECCCcCcHHHHHHHHHHHhcCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCc
Confidence 999999999999999999999999999999999999999854 5888999999999999999999999999999999999
Q ss_pred eeecCCCcceEEEcCCCCHHHHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHhcccccCCCCCCCcCCC
Q 001665 442 VQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDASADVGPV 520 (1035)
Q Consensus 442 v~lElGGknp~IV~~dADld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d~~~~~Gpl 520 (1035)
+++|+|||||+||++|||++.|++.|++++|+|+||.|+++++|||+++++ +|+++|+++++++++|+|.++++++||+
T Consensus 241 ~~lelgG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl 320 (478)
T cd07131 241 VALEMGGKNPIIVMDDADLDLALEGALWSAFGTTGQRCTATSRLIVHESVYDEFLKRFVERAKRLRVGDGLDEETDMGPL 320 (478)
T ss_pred EEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhhHHHHHHHHHHHHHhcCCCCCCCCCCcCCcC
Confidence 999999999999999999999999999999999999999999999999998 8999999999999999999999999999
Q ss_pred cCHHHHHHHHHHHHHHHHCCCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecCCHHHHHHHH
Q 001665 521 VSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMV 600 (1035)
Q Consensus 521 i~~~~~~rl~~~i~~av~~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI~la 600 (1035)
+++.+++++.++|++|+++|+++++||.....++..+|+|++||||.++++++++++||+||||++|++|+|+||||+++
T Consensus 321 i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~~eai~~~ 400 (478)
T cd07131 321 INEAQLEKVLNYNEIGKEEGATLLLGGERLTGGGYEKGYFVEPTVFTDVTPDMRIAQEEIFGPVVALIEVSSLEEAIEIA 400 (478)
T ss_pred CCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCceECCEEEeCCCCCChHhhCCCcCCeEEEEEeCCHHHHHHHH
Confidence 99999999999999999999999999875322222468999999999999999999999999999999999999999999
Q ss_pred HhcCCCcEEEEEcCCHHHHHHHHhccceeEEEEcCCc-----CCCCCCCCCCCCC-CcCcHHHHHhcceeeEEEEe
Q 001665 601 NRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPV-----PSSFSSINESGEF-NFCGKSGVQFYTQIKTVAQQ 670 (1035)
Q Consensus 601 N~~~~GLsasVfS~d~~~a~~~a~~l~sG~V~IN~~~-----~~PfGG~g~SG~G-~~~G~~g~~~ft~~k~v~~~ 670 (1035)
|+.+|||+++|||+|.++++++++++++|+|+||+.. .+||||+|.||+| +.+|.+|+++|++.|+|+..
T Consensus 401 n~~~~gL~~~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~pfgG~k~SG~G~~~~g~~~~~~f~~~k~i~~~ 476 (478)
T cd07131 401 NDTEYGLSSAIYTEDVNKAFRARRDLEAGITYVNAPTIGAEVHLPFGGVKKSGNGHREAGTTALDAFTEWKAVYVD 476 (478)
T ss_pred hCCCCcceEEEEcCCHHHHHHHHHhcCccEEEECCCCCCCCCCCCCCCcccccCCCcCCcHHHHHHhhheEEEEEe
Confidence 9999999999999999999999999999999999752 2899999999999 77899999999999999764
|
Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. |
| >PRK13968 putative succinate semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-86 Score=781.19 Aligned_cols=450 Identities=25% Similarity=0.395 Sum_probs=422.1
Q ss_pred CCeEEeecCCCCCeEEEecCCCHHHHHHHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHH
Q 001665 216 SATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKA 295 (1035)
Q Consensus 216 ~~~~~v~nP~tGevi~~v~~~s~~dv~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e~La~~i~~etGk~~~e 295 (1035)
.++++++||+||++|++++.++.+++++++++|++||+.|+.++.++|.++|++++++|+++.++|++++++|+||++.+
T Consensus 6 ~~~~~~~nP~t~~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~ 85 (462)
T PRK13968 6 ATHAISVNPATGEQLSVLPWAGADDIENALQLAAAGFRDWRETNIDYRAQKLRDIGKALRARSEEMAQMITREMGKPINQ 85 (462)
T ss_pred CCceEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhCCCHHH
Confidence 45788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCccccCCCCCCcceeeeccceeEEEECCCCcchhchHHHHHHHHhcCCEEEEeCCCC
Q 001665 296 AQRDVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEK 375 (1035)
Q Consensus 296 A~~EV~~a~~~l~~~~~~a~~~~g~~~~~~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~ALaaGNaVVlKPS~~ 375 (1035)
++.|+..+++.+++++..+....+.... ...+...+++++|+|||++|+|||||++++++++++||++||+||+|||+.
T Consensus 86 a~~ev~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~GvV~~I~PwN~P~~~~~~~~~~ALaaGN~vv~KPs~~ 164 (462)
T PRK13968 86 ARAEVAKSANLCDWYAEHGPAMLKAEPT-LVENQQAVIEYRPLGTILAIMPWNFPLWQVMRGAVPILLAGNGYLLKHAPN 164 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCccc-cCCCceEEEEEeccceEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCc
Confidence 9999999999999998766544332111 113445678899999999999999999999999999999999999999999
Q ss_pred ChhHHHHHHHHHHHhCCCCCcEEEeecchhhHhhhhcCCCccEEEEeccchHHHHHHHHHHhcCCceeecCCCcceEEEc
Q 001665 376 NPGTSMILAALAMEAGLPDGVLNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIM 455 (1035)
Q Consensus 376 ap~ta~~L~ell~eAGlP~gvv~vV~g~~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~l~Pv~lElGGknp~IV~ 455 (1035)
+|.++.+|++++.++|+|+|++|+|+|+.+.+..|+.|+++|+|+||||+.+|+.|++.|+++++|+++|+|||||+||+
T Consensus 165 tp~~~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~l~~~~~v~~V~fTGs~~~G~~i~~~aa~~l~~~~lElGGk~p~iV~ 244 (462)
T PRK13968 165 VMGCAQLIAQVFKDAGIPQGVYGWLNADNDGVSQMINDSRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFIVL 244 (462)
T ss_pred ChHHHHHHHHHHHHcCcCcCcEEEEecCchhhHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCcEEEecCCCCceEEC
Confidence 99999999999999999999999999866556679999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHhcccccCCCCCCCcCCCcCHHHHHHHHHHHH
Q 001665 456 PDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQ 534 (1035)
Q Consensus 456 ~dADld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d~~~~~Gpli~~~~~~rl~~~i~ 534 (1035)
+|||++.|++.+++++|+|+||.|+++++|||+++++ +|+++|+++++++++|+|.+.++++||+++..+++++.++++
T Consensus 245 ~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~~~~~i~ 324 (462)
T PRK13968 245 NDADLELAVKAAVAGRYQNTGQVCAAAKRFIIEEGIASAFTERFVAAAAALKMGDPRDEENALGPMARFDLRDELHHQVE 324 (462)
T ss_pred CCCCHHHHHHHHHHHHHhccCCCCcCCcEEEECHhHHHHHHHHHHHHHhcCCcCCCCCCCCCcCCCCCHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999998 999999999999999999999999999999999999999999
Q ss_pred HHHHCCCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecCCHHHHHHHHHhcCCCcEEEEEcC
Q 001665 535 NAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTS 614 (1035)
Q Consensus 535 ~av~~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI~laN~~~~GLsasVfS~ 614 (1035)
+++.+|+++++||... ...|+|++||||.+++++|.+++||+||||++|++|+|+||||+++|+++|||+++|||+
T Consensus 325 ~a~~~Ga~vl~gg~~~----~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~d~~eai~~~n~~~~gLs~~v~t~ 400 (462)
T PRK13968 325 ATLAEGARLLLGGEKI----AGAGNYYAPTVLANVTPEMTAFREELFGPVAAITVAKDAEHALELANDSEFGLSATIFTT 400 (462)
T ss_pred HHHHCCCEEEeCCCcC----CCCceEECCEEEeCCCCCChHHhCCCcCCEEEEEEECCHHHHHHHHhCCCCcceEEEEcC
Confidence 9999999999998642 125899999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhccceeEEEEcCCc----CCCCCCCCCCCCCCcCcHHHHHhcceeeEEEEe
Q 001665 615 SGLAARKFQNEIEARLVGINVPV----PSSFSSINESGEFNFCGKSGVQFYTQIKTVAQQ 670 (1035)
Q Consensus 615 d~~~a~~~a~~l~sG~V~IN~~~----~~PfGG~g~SG~G~~~G~~g~~~ft~~k~v~~~ 670 (1035)
|.+.+.++++++++|+|+||+.. .+||||+|.||+|+++|++|+++||+.|+|++.
T Consensus 401 d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~v~~~ 460 (462)
T PRK13968 401 DETQARQMAARLECGGVFINGYCASDARVAFGGVKKSGFGRELSHFGLHEFCNIQTVWKD 460 (462)
T ss_pred CHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCccccccCcCchHHHHHHhcceeEEEEe
Confidence 99999999999999999999863 289999999999999999999999999999764
|
|
| >cd07143 ALDH_AldA_AN0554 Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-86 Score=782.29 Aligned_cols=463 Identities=31% Similarity=0.426 Sum_probs=433.2
Q ss_pred cceEEcCEEecCCCCCeEEeecCCCCCeEEEecCCCHHHHHHHHHHHHHhhH-hhh-CCCHHHHHHHHHHHHHHHHHhHH
Q 001665 202 VSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFP-AWK-NTPVATRQRIMFKLQELIRRDID 279 (1035)
Q Consensus 202 ~~~~I~G~~~~~~~~~~~~v~nP~tGevi~~v~~~s~~dv~~av~~Ar~A~~-~W~-~~s~~~R~~iL~~la~~L~~~~e 279 (1035)
+++||||+|+.+.++..++++||+||+++++++.++.+|+++|+++|++||+ .|+ .++.++|.++|++++++|+++.+
T Consensus 7 ~~~~I~G~~~~~~~~~~~~v~~P~t~~~i~~~~~~~~~~v~~av~~a~~a~~~~W~~~~~~~~R~~~L~~~a~~l~~~~~ 86 (481)
T cd07143 7 TGLFINGEFVDSVHGGTVKVYNPSTGKLITKIAEATEADVDIAVEVAHAAFETDWGLKVSGSKRGRCLSKLADLMERNLD 86 (481)
T ss_pred cCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhhcccCCHHHHHHHHHHHHHHHHHhHH
Confidence 4679999999876667899999999999999999999999999999999998 599 99999999999999999999999
Q ss_pred HHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHhhcCccccCCCCCCcceeeeccceeEEEECCCCcchhchHHHH
Q 001665 280 KLAMNITVEQGTTLKAA-QRDVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMF 358 (1035)
Q Consensus 280 ~La~~i~~etGk~~~eA-~~EV~~a~~~l~~~~~~a~~~~g~~~~~~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l 358 (1035)
+|++++++|+||++.++ ..|+..+++.+++++.++....+...... .+...+++++|+|||++|+|||||+.++++++
T Consensus 87 ~l~~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~a~~~~g~~~~~~-~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~ 165 (481)
T cd07143 87 YLASIEALDNGKTFGTAKRVDVQASADTFRYYGGWADKIHGQVIETD-IKKLTYTRHEPIGVCGQIIPWNFPLLMCAWKI 165 (481)
T ss_pred HHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCC-CCceEEEEEecceeEEEECCCcChHHHHHHHH
Confidence 99999999999999765 56999999999999887766555433221 34456788999999999999999999999999
Q ss_pred HHHHhcCCEEEEeCCCCChhHHHHHHHHHHHhCCCCCcEEEeecc-hhhHhhhhcCCCccEEEEeccchHHHHHHHHHHh
Q 001665 359 SIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGT-NDVINHICDDEDIKAISFVASSTASVQMYARAAA 437 (1035)
Q Consensus 359 ~~ALaaGNaVVlKPS~~ap~ta~~L~ell~eAGlP~gvv~vV~g~-~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~ 437 (1035)
++||++||+||+|||+.+|.++..+++++.++|+|+|++|+|+|+ .+.+..|+.|+++|+|+||||+.+|+.|+++|++
T Consensus 166 ~~ALaaGN~VvlKps~~~p~~~~~l~~~l~~aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~G~~i~~~aa~ 245 (481)
T cd07143 166 APALAAGNTIVLKPSELTPLSALYMTKLIPEAGFPPGVINVVSGYGRTCGNAISSHMDIDKVAFTGSTLVGRKVMEAAAK 245 (481)
T ss_pred HHHHHcCCEEEEeCCCCCcHHHHHHHHHHHhcCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECchHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999995 4678999999999999999999999999999885
Q ss_pred -cCCceeecCCCcceEEEcCCCCHHHHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHhcccccCCCCCC
Q 001665 438 -RGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDASA 515 (1035)
Q Consensus 438 -~l~Pv~lElGGknp~IV~~dADld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d~~~ 515 (1035)
.++|+++|+|||||+||++|||++.|++.+++++|+|+||.|+++++|||+++++ +|+++|+++++++++|+|.++++
T Consensus 246 ~~~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~naGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 325 (481)
T cd07143 246 SNLKKVTLELGGKSPNIVFDDADLESAVVWTAYGIFFNHGQVCCAGSRIYVQEGIYDKFVKRFKEKAKKLKVGDPFAEDT 325 (481)
T ss_pred hcCCEEEeecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCCCCC
Confidence 7899999999999999999999999999999999999999999999999999998 99999999999999999999999
Q ss_pred CcCCCcCHHHHHHHHHHHHHHHHCCCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecCCHHH
Q 001665 516 DVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEE 595 (1035)
Q Consensus 516 ~~Gpli~~~~~~rl~~~i~~av~~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~ee 595 (1035)
++||++++.+++++.++|++++.+|+++++||... ...|+|++|||+.++++++.+++||+||||++|++|+|++|
T Consensus 326 ~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~----~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~e 401 (481)
T cd07143 326 FQGPQVSQIQYERIMSYIESGKAEGATVETGGKRH----GNEGYFIEPTIFTDVTEDMKIVKEEIFGPVVAVIKFKTEEE 401 (481)
T ss_pred CCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCCC----CCCceEEeeEEEecCCCCChhhhcCCcCCeEEEEeeCCHHH
Confidence 99999999999999999999999999999998742 13689999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCcEEEEEcCCHHHHHHHHhccceeEEEEcCCcC----CCCCCCCCCCCCCcCcHHHHHhcceeeEEEE
Q 001665 596 AIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPVP----SSFSSINESGEFNFCGKSGVQFYTQIKTVAQ 669 (1035)
Q Consensus 596 AI~laN~~~~GLsasVfS~d~~~a~~~a~~l~sG~V~IN~~~~----~PfGG~g~SG~G~~~G~~g~~~ft~~k~v~~ 669 (1035)
||+++|+++|||++||||+|.+.+.++++++++|+|+||+... +||||+|.||+|+++|.+++++||+.|++++
T Consensus 402 ai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~i~~ 479 (481)
T cd07143 402 AIKRANDSTYGLAAAVFTNNINNAIRVANALKAGTVWVNCYNLLHHQVPFGGYKQSGIGRELGEYALENYTQIKAVHI 479 (481)
T ss_pred HHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCCCCccccccCcccHHHHHHHHhCeEEEEE
Confidence 9999999999999999999999999999999999999998632 8999999999999999999999999999875
|
NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. |
| >TIGR01804 BADH glycine betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-86 Score=782.64 Aligned_cols=460 Identities=33% Similarity=0.515 Sum_probs=430.8
Q ss_pred EEcCEEecCCCCCeEEeecCCCCCeEEEecCCCHHHHHHHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHHhHHHHHHH
Q 001665 205 FIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMN 284 (1035)
Q Consensus 205 ~I~G~~~~~~~~~~~~v~nP~tGevi~~v~~~s~~dv~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e~La~~ 284 (1035)
||||+|+.+.++..+.++||+||+++++++.++.+++++++++|++||+.|+.++.++|.++|++++++|++++++|+++
T Consensus 1 ~i~g~~~~~~~~~~~~~~nP~t~~~i~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~ 80 (467)
T TIGR01804 1 FIDGEWVEASAGETREIINPANQEVIATVAEATREDVERAIAAARRAQGEWASMTPEERGRILRRIAELIRERNEELAKL 80 (467)
T ss_pred CCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 69999997656689999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHhhcCccccCCCCCCcceeeeccceeEEEECCCCcchhchHHHHHHHHh
Q 001665 285 ITVEQGTTLKAA-QRDVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVT 363 (1035)
Q Consensus 285 i~~etGk~~~eA-~~EV~~a~~~l~~~~~~a~~~~g~~~~~~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~ALa 363 (1035)
+++|+||++.++ ..|+..+++.++++++.+....+....... ....+.+++|+|||++|+|||||+.++++++++||+
T Consensus 81 ~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~-~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALa 159 (467)
T TIGR01804 81 ETLDTGKTLEETSVADMDDIADVFEFFAGLADKDGGEIIPLPI-PSFSYTIREPLGVCVGIGAWNYPLQIASWKIAPALA 159 (467)
T ss_pred HHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCCccccCCC-CceEEEEEeeeeEEEEECCCchHHHHHHHHHHHHHh
Confidence 999999999999 679999999999998877665544332211 134578899999999999999999999999999999
Q ss_pred cCCEEEEeCCCCChhHHHHHHHHHHHhCCCCCcEEEeecc-hhhHhhhhcCCCccEEEEeccchHHHHHHHHHHhcCCce
Q 001665 364 CGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGT-NDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRV 442 (1035)
Q Consensus 364 aGNaVVlKPS~~ap~ta~~L~ell~eAGlP~gvv~vV~g~-~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~l~Pv 442 (1035)
+||+||+|||+.+|.++..|+++|.++|+|+|++|+|+|+ .+.+..|+.|++||+|+||||+.+|+.|+++++++++|+
T Consensus 160 aGN~VvlKps~~tp~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a~~~l~~~ 239 (467)
T TIGR01804 160 AGNAMVFKPSEITPLTALKVAELMEEAGLPDGVFNVVLGKGAEVGEPLVNHKDVAKVSFTGGVPTGKKIMAAAADHLKHV 239 (467)
T ss_pred cCCEEEeeCCccCcHHHHHHHHHHHHcCcCcCcEEEEeCCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcE
Confidence 9999999999999999999999999999999999999986 678899999999999999999999999999999999999
Q ss_pred eecCCCcceEEEcCCCCHHHHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHhcccccCCCCCCCcCCCc
Q 001665 443 QSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDASADVGPVV 521 (1035)
Q Consensus 443 ~lElGGknp~IV~~dADld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d~~~~~Gpli 521 (1035)
++|+|||||+||++|||++.|++.+++++|+|+||.|+++++|||+++++ +|+++|+++++++++|+|.++++++||++
T Consensus 240 ~lElGG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli 319 (467)
T TIGR01804 240 TMELGGKSPLIVFDDADLELAVDQAMNGNFFSAGQVCSNGTRVFVHNKIKEKFEARLVERTKRIKLGDGFDEATEMGPLI 319 (467)
T ss_pred EEecCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCCCCCCCEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCccCccC
Confidence 99999999999999999999999999999999999999999999999998 99999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHCCCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecCCHHHHHHHHH
Q 001665 522 SVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVN 601 (1035)
Q Consensus 522 ~~~~~~rl~~~i~~av~~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI~laN 601 (1035)
++.+++++.++|++++++|+++++||.....+....|.|++|||+.++++++++++||+||||++|++|+|+||||+++|
T Consensus 320 ~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n 399 (467)
T TIGR01804 320 SAEHRDKVESYIEKGKEEGATLACGGKRPEREGLQNGFFIEPTVFTDCTDDMTIVREEIFGPVMTVLTFSSEDEVIARAN 399 (467)
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCeEEeeEEEeCCCCCChHHhCCCCCceEEEEecCCHHHHHHHHh
Confidence 99999999999999999999999999643222223689999999999999999999999999999999999999999999
Q ss_pred hcCCCcEEEEEcCCHHHHHHHHhccceeEEEEcCCcC----CCCCCCCCCCCCCcCcHHHHHhcceee
Q 001665 602 RNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPVP----SSFSSINESGEFNFCGKSGVQFYTQIK 665 (1035)
Q Consensus 602 ~~~~GLsasVfS~d~~~a~~~a~~l~sG~V~IN~~~~----~PfGG~g~SG~G~~~G~~g~~~ft~~k 665 (1035)
+++|||+++|||+|..++.+|++++++|+|+||+... +||||+|.||+|+++|++|+++||+.|
T Consensus 400 ~~~~gLsa~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~~~~~~~~~ 467 (467)
T TIGR01804 400 DTIYGLAAGVFTADLGRAHRVANQLKAGTVWINDFHPYPAEAPWGGYKQSGIGRENGKAGLAEYTEVK 467 (467)
T ss_pred CCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCccCCCChHHHHHHHhccC
Confidence 9999999999999999999999999999999998642 899999999999999999999999865
|
Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171). |
| >cd07091 ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-86 Score=783.00 Aligned_cols=462 Identities=32% Similarity=0.442 Sum_probs=432.5
Q ss_pred cceEEcCEEecCCCCCeEEeecCCCCCeEEEecCCCHHHHHHHHHHHHHhhHhhh--CCCHHHHHHHHHHHHHHHHHhHH
Q 001665 202 VSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWK--NTPVATRQRIMFKLQELIRRDID 279 (1035)
Q Consensus 202 ~~~~I~G~~~~~~~~~~~~v~nP~tGevi~~v~~~s~~dv~~av~~Ar~A~~~W~--~~s~~~R~~iL~~la~~L~~~~e 279 (1035)
.++||||+|+.+.++..++++||+||+++++++.++.++++.++++|++||+.|+ .++.++|.++|++++++|+++.+
T Consensus 4 ~~~~I~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 83 (476)
T cd07091 4 TGLFINNEFVDSVSGKTFPTINPATEEVICQVAEADEEDVDAAVKAARAAFETGWWRKMDPRERGRLLNKLADLIERDRD 83 (476)
T ss_pred ccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHH
Confidence 4689999999766678899999999999999999999999999999999999855 99999999999999999999999
Q ss_pred HHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHhhcCccccCCCCCCcceeeeccceeEEEECCCCcchhchHHHH
Q 001665 280 KLAMNITVEQGTTLKAA-QRDVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMF 358 (1035)
Q Consensus 280 ~La~~i~~etGk~~~eA-~~EV~~a~~~l~~~~~~a~~~~g~~~~~~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l 358 (1035)
+|++++++|+||+..++ ..|+..+++.+++++.++....+...+.. .+...+++++|+|||++|+|||||+.++++++
T Consensus 84 ~la~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~ 162 (476)
T cd07091 84 ELAALESLDNGKPLEESAKGDVALSIKCLRYYAGWADKIQGKTIPID-GNFLAYTRREPIGVCGQIIPWNFPLLMLAWKL 162 (476)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCC-CCceEEEEEeceeEEEEECCCcCHHHHHHHHH
Confidence 99999999999999665 46999999999999887765555433222 34456789999999999999999999999999
Q ss_pred HHHHhcCCEEEEeCCCCChhHHHHHHHHHHHhCCCCCcEEEeecc-hhhHhhhhcCCCccEEEEeccchHHHHHHHHHHh
Q 001665 359 SIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGT-NDVINHICDDEDIKAISFVASSTASVQMYARAAA 437 (1035)
Q Consensus 359 ~~ALaaGNaVVlKPS~~ap~ta~~L~ell~eAGlP~gvv~vV~g~-~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~ 437 (1035)
++||++||+||+|||+.+|.++.+|+++|.++|+|+|+||+|+|+ .+.+..|+.|+++|+|+||||+.+|+.|++.|+.
T Consensus 163 ~~AL~aGN~VvlKps~~~p~~~~~l~~~~~~aglP~g~~~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~g~~v~~~aa~ 242 (476)
T cd07091 163 APALAAGNTVVLKPAEQTPLSALYLAELIKEAGFPPGVVNIVPGFGPTAGAAISSHMDVDKIAFTGSTAVGRTIMEAAAK 242 (476)
T ss_pred HHHHHcCCEEEEeCCCCChHHHHHHHHHHHHcCcCCCcEEEEeCCChhHHHHHhcCCCcCEEEEECcHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999984 4678899999999999999999999999999988
Q ss_pred -cCCceeecCCCcceEEEcCCCCHHHHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHhcccccCCCCCC
Q 001665 438 -RGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDASA 515 (1035)
Q Consensus 438 -~l~Pv~lElGGknp~IV~~dADld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d~~~ 515 (1035)
+++|+++|+|||||+||++|||++.|++.|++++|+|+||.|+++++|||+++++ +|+++|+++++++++|+|.++++
T Consensus 243 ~~~~~~~lElgG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~L~~~~~~~~~g~p~~~~~ 322 (476)
T cd07091 243 SNLKKVTLELGGKSPNIVFDDADLDKAVEWAAFGIFFNQGQCCCAGSRIFVQESIYDEFVEKFKARAEKRVVGDPFDPDT 322 (476)
T ss_pred cCCceEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEeHHHHHHHHHHHHHHHhhCCCCCCCCCCC
Confidence 8999999999999999999999999999999999999999999999999999998 99999999999999999999999
Q ss_pred CcCCCcCHHHHHHHHHHHHHHHHCCCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecCCHHH
Q 001665 516 DVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEE 595 (1035)
Q Consensus 516 ~~Gpli~~~~~~rl~~~i~~av~~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~ee 595 (1035)
++||++++.+++++.++|++++++|+++++||... ...|+|++|||+.++++++.+++||+||||++|++|+|++|
T Consensus 323 ~~gpli~~~~~~~v~~~i~~a~~~ga~vl~gg~~~----~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~e 398 (476)
T cd07091 323 FQGPQVSKAQFDKILSYIESGKKEGATLLTGGERH----GSKGYFIQPTVFTDVKDDMKIAKEEIFGPVVTILKFKTEDE 398 (476)
T ss_pred cCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCC----CCCCceECcEEecCCCCCChhhhCCCCCCeEEEeecCCHHH
Confidence 99999999999999999999999999999998742 23689999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCcEEEEEcCCHHHHHHHHhccceeEEEEcCCcC----CCCCCCCCCCCCCcCcHHHHHhcceeeEEE
Q 001665 596 AIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPVP----SSFSSINESGEFNFCGKSGVQFYTQIKTVA 668 (1035)
Q Consensus 596 AI~laN~~~~GLsasVfS~d~~~a~~~a~~l~sG~V~IN~~~~----~PfGG~g~SG~G~~~G~~g~~~ft~~k~v~ 668 (1035)
||+++|+.+|||+++|||+|.+.+.++++++++|+|+||+... +||||+|.||+|+++|++|+++|++.|++.
T Consensus 399 ai~~~n~~~~gLsa~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~k~SG~G~~~g~~~~~~f~~~k~~~ 475 (476)
T cd07091 399 VIERANDTEYGLAAGVFTKDINKALRVSRALKAGTVWVNTYNVFDAAVPFGGFKQSGFGRELGEEGLEEYTQVKAVT 475 (476)
T ss_pred HHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCcccCcCCccchHHHHHHhhceeEEe
Confidence 9999999999999999999999999999999999999998532 899999999999999999999999999875
|
ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the co |
| >cd07124 ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-86 Score=787.62 Aligned_cols=468 Identities=33% Similarity=0.467 Sum_probs=437.0
Q ss_pred CCCccceEEcCEEecCCCCCeEEeecCCC-CCeEEEecCCCHHHHHHHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHH
Q 001665 198 DNNRVSNFIGGKFVDLRGSATIDVINPAT-QEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRR 276 (1035)
Q Consensus 198 ~~~~~~~~I~G~~~~~~~~~~~~v~nP~t-Gevi~~v~~~s~~dv~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~ 276 (1035)
.+..++.||||+|+.+ +..++++||+| |+++++++.++.++++++++.|++||+.|+.++.++|.++|++++++|++
T Consensus 29 ~~~~~~~~i~g~~~~~--~~~~~v~~P~t~~~~i~~~~~a~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~ 106 (512)
T cd07124 29 LGREYPLVIGGKEVRT--EEKIESRNPADPSEVLGTVQKATKEEAEAAVQAARAAFPTWRRTPPEERARLLLRAAALLRR 106 (512)
T ss_pred cccccceeECCEEecC--CCeEEeECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH
Confidence 4567789999999964 46799999998 99999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCccccCCCCCCcceeeeccceeEEEECCCCcchhchHH
Q 001665 277 DIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLW 356 (1035)
Q Consensus 277 ~~e~La~~i~~etGk~~~eA~~EV~~a~~~l~~~~~~a~~~~g~~~~~~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~ 356 (1035)
+.++|++++++|+||++.+++.|+..+++.++++++.+....+..... ..+...+++++|+|||++|+|||||+.++++
T Consensus 107 ~~~~la~~~~~e~Gk~~~ea~~ev~~~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~ 185 (512)
T cd07124 107 RRFELAAWMVLEVGKNWAEADADVAEAIDFLEYYAREMLRLRGFPVEM-VPGEDNRYVYRPLGVGAVISPWNFPLAILAG 185 (512)
T ss_pred CHHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccC-CCCceeEEEEecceEEEEECCCChHHHHHHH
Confidence 999999999999999999999999999999999998776665443322 2345678899999999999999999999999
Q ss_pred HHHHHHhcCCEEEEeCCCCChhHHHHHHHHHHHhCCCCCcEEEeecc-hhhHhhhhcCCCccEEEEeccchHHHHHHHHH
Q 001665 357 MFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGT-NDVINHICDDEDIKAISFVASSTASVQMYARA 435 (1035)
Q Consensus 357 ~l~~ALaaGNaVVlKPS~~ap~ta~~L~ell~eAGlP~gvv~vV~g~-~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aA 435 (1035)
++++||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+|+ .+.+..|+.|+++++|+||||+.+|+.|++.+
T Consensus 186 ~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~a 265 (512)
T cd07124 186 MTTAALVTGNTVVLKPAEDTPVIAAKLVEILEEAGLPPGVVNFLPGPGEEVGDYLVEHPDVRFIAFTGSREVGLRIYERA 265 (512)
T ss_pred HHHHHHHcCCEEEEECCccccHHHHHHHHHHHHhCcCCCceEEeccCchHHHHHHhcCCCCCEEEEeCchHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999985 46789999999999999999999999999999
Q ss_pred Hh------cCCceeecCCCcceEEEcCCCCHHHHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHhcccc
Q 001665 436 AA------RGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVN 508 (1035)
Q Consensus 436 a~------~l~Pv~lElGGknp~IV~~dADld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG 508 (1035)
++ +++|+++|+|||||+||++|||++.|++.|++++|.|+||.|+++++|||+++++ +|+++|+++++++++|
T Consensus 266 a~~~~~~~~l~~~~lElgGk~p~iV~~daDl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g 345 (512)
T cd07124 266 AKVQPGQKWLKRVIAEMGGKNAIIVDEDADLDEAAEGIVRSAFGFQGQKCSACSRVIVHESVYDEFLERLVERTKALKVG 345 (512)
T ss_pred hcccccccCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhCCCccccceEEEEcHHHHHHHHHHHHHHHHhCCCC
Confidence 87 6999999999999999999999999999999999999999999999999999998 8999999999999999
Q ss_pred cCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEE
Q 001665 509 VGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNM 588 (1035)
Q Consensus 509 ~p~d~~~~~Gpli~~~~~~rl~~~i~~av~~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~ 588 (1035)
+|.++++++||++++.+++++.++|++++. |+++++||..... ...|+|++|||+.++++++.+++||+||||++|+
T Consensus 346 ~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~-g~~vl~gG~~~~~--~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~ 422 (512)
T cd07124 346 DPEDPEVYMGPVIDKGARDRIRRYIEIGKS-EGRLLLGGEVLEL--AAEGYFVQPTIFADVPPDHRLAQEEIFGPVLAVI 422 (512)
T ss_pred CCCCCCCcccCCcCHHHHHHHHHHHHHHHh-CCEEEecCccCCC--CCCCceEcCEEEecCCCCChHHhCCCcCCeEEEE
Confidence 999999999999999999999999999988 8999999874211 1368999999999999999999999999999999
Q ss_pred ecCCHHHHHHHHHhcCCCcEEEEEcCCHHHHHHHHhccceeEEEEcCCc-----C-CCCCCCCCCCCC-CcCcHHHHHhc
Q 001665 589 QADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPV-----P-SSFSSINESGEF-NFCGKSGVQFY 661 (1035)
Q Consensus 589 ~~~d~eeAI~laN~~~~GLsasVfS~d~~~a~~~a~~l~sG~V~IN~~~-----~-~PfGG~g~SG~G-~~~G~~g~~~f 661 (1035)
+|+|+||||+++|+++|||++||||+|.+.++++++++++|.|+||+.. . +||||+|.||+| +.+|.+|+++|
T Consensus 423 ~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~vN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~~~~~ 502 (512)
T cd07124 423 KAKDFDEALEIANDTEYGLTGGVFSRSPEHLERARREFEVGNLYANRKITGALVGRQPFGGFKMSGTGSKAGGPDYLLQF 502 (512)
T ss_pred ecCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCCccCcHHHHHHh
Confidence 9999999999999999999999999999999999999999999999753 2 799999999999 77889999999
Q ss_pred ceeeEEEEec
Q 001665 662 TQIKTVAQQW 671 (1035)
Q Consensus 662 t~~k~v~~~~ 671 (1035)
|+.|+++++|
T Consensus 503 t~~k~v~~~~ 512 (512)
T cd07124 503 MQPKTVTENF 512 (512)
T ss_pred ccEEEEEEeC
Confidence 9999998764
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. |
| >PRK09406 gabD1 succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-86 Score=777.14 Aligned_cols=447 Identities=28% Similarity=0.403 Sum_probs=420.3
Q ss_pred EEeecCCCCCeEEEecCCCHHHHHHHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHH
Q 001665 219 IDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQR 298 (1035)
Q Consensus 219 ~~v~nP~tGevi~~v~~~s~~dv~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e~La~~i~~etGk~~~eA~~ 298 (1035)
++++||+||+++++++.++.+|+++++++|++||+.|+.++.++|.++|++++++|++++++|++++++|+||++.+++.
T Consensus 3 ~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ 82 (457)
T PRK09406 3 IATINPATGETVKTFTALTDDEVDAAIARAHARFRDYRTTTFAQRARWANAAADLLEAEADQVAALMTLEMGKTLASAKA 82 (457)
T ss_pred eeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHhcCCCHHHHHH
Confidence 77899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcCccccCC--CCCCcceeeeccceeEEEECCCCcchhchHHHHHHHHhcCCEEEEeCCCCC
Q 001665 299 DVLFGLEVVEQACAVATLQIGEFVPNA--LCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKN 376 (1035)
Q Consensus 299 EV~~a~~~l~~~~~~a~~~~g~~~~~~--~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~ALaaGNaVVlKPS~~a 376 (1035)
|+..+++.+++++..+....+...... ..+...+++++|+|||++|+|||||++++++++++||++||+||+|||+.+
T Consensus 83 ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~PwN~Pl~~~~~~~~~ALaaGN~VV~Kps~~~ 162 (457)
T PRK09406 83 EALKCAKGFRYYAEHAEALLADEPADAAAVGASRAYVRYQPLGVVLAVMPWNFPLWQVVRFAAPALMAGNVGLLKHASNV 162 (457)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCccccccCCCCceEEEEEecceeEEEECCccchHHHHHHHHHHHHHcCCEEEEECCCcC
Confidence 999999999999887665443221111 122356788999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHhCCCCCcEEEeecchhhHhhhhcCCCccEEEEeccchHHHHHHHHHHhcCCceeecCCCcceEEEcC
Q 001665 377 PGTSMILAALAMEAGLPDGVLNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMP 456 (1035)
Q Consensus 377 p~ta~~L~ell~eAGlP~gvv~vV~g~~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~l~Pv~lElGGknp~IV~~ 456 (1035)
|.++.+|+++|.++|+|+|+||+|.++.+.+.+|+.|+++++|+||||+.+|+.|++.++++++|+++|+|||||+||++
T Consensus 163 p~~~~~l~~l~~~aGlP~gvv~~v~~g~~~~~~l~~~~~i~~V~fTGs~~~G~~i~~~a~~~~~~~~lElGG~~~~iV~~ 242 (457)
T PRK09406 163 PQTALYLADLFRRAGFPDGCFQTLLVGSGAVEAILRDPRVAAATLTGSEPAGRAVAAIAGDEIKKTVLELGGSDPFIVMP 242 (457)
T ss_pred cHHHHHHHHHHHHhCCCcCcEEEEcCCchhHHHHhcCCCcCEEEEECcHHHHHHHHHHHHhcCCceeeecCCCCeeEECC
Confidence 99999999999999999999999987666778999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHhcccccCCCCCCCcCCCcCHHHHHHHHHHHHH
Q 001665 457 DASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQN 535 (1035)
Q Consensus 457 dADld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d~~~~~Gpli~~~~~~rl~~~i~~ 535 (1035)
|||++.|++.|++++|.|+||.|+++++|||+++++ +|+++|+++++++++|+|.++++++||++++.+++++.++|++
T Consensus 243 dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~~~~~i~~ 322 (457)
T PRK09406 243 SADLDRAAETAVTARVQNNGQSCIAAKRFIVHADVYDAFAEKFVARMAALRVGDPTDPDTDVGPLATEQGRDEVEKQVDD 322 (457)
T ss_pred CCCHHHHHHHHHHHHhhCCCCcccCCeEEEEcHHHHHHHHHHHHHHHhhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999998 9999999999999999999999999999999999999999999
Q ss_pred HHHCCCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecCCHHHHHHHHHhcCCCcEEEEEcCC
Q 001665 536 AVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSS 615 (1035)
Q Consensus 536 av~~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI~laN~~~~GLsasVfS~d 615 (1035)
++++|+++++||... +..|+|++||||.+++++|.+++||+||||++|++|+|++|||+++|+++|||+++|||+|
T Consensus 323 a~~~Ga~~l~gg~~~----~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d 398 (457)
T PRK09406 323 AVAAGATILCGGKRP----DGPGWFYPPTVITDITPDMRLYTEEVFGPVASLYRVADIDEAIEIANATTFGLGSNAWTRD 398 (457)
T ss_pred HHHCCCEEEeCCCcC----CCCCceEccEEeecCCCCCHHhhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEEcCC
Confidence 999999999999742 2368999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccceeEEEEcCCcC----CCCCCCCCCCCCCcCcHHHHHhcceeeEEEE
Q 001665 616 GLAARKFQNEIEARLVGINVPVP----SSFSSINESGEFNFCGKSGVQFYTQIKTVAQ 669 (1035)
Q Consensus 616 ~~~a~~~a~~l~sG~V~IN~~~~----~PfGG~g~SG~G~~~G~~g~~~ft~~k~v~~ 669 (1035)
.+.+.++++++++|.|+||+... +||||+|.||+|+++|++++++||+.|+|.+
T Consensus 399 ~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~ 456 (457)
T PRK09406 399 EAEQERFIDDLEAGQVFINGMTVSYPELPFGGVKRSGYGRELSAHGIREFCNIKTVWI 456 (457)
T ss_pred HHHHHHHHHhCCcceEEECCCCCCCCCCCCCCccccccCccchHHHHHHhhceEEEEe
Confidence 99999999999999999998532 8999999999999999999999999999863
|
|
| >TIGR01237 D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-85 Score=784.99 Aligned_cols=466 Identities=28% Similarity=0.450 Sum_probs=434.5
Q ss_pred CCccceEEcCEEecCCCCCeEEeecCC-CCCeEEEecCCCHHHHHHHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHHh
Q 001665 199 NNRVSNFIGGKFVDLRGSATIDVINPA-TQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRD 277 (1035)
Q Consensus 199 ~~~~~~~I~G~~~~~~~~~~~~v~nP~-tGevi~~v~~~s~~dv~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~ 277 (1035)
...+++||||+|+.+ +..+.++||+ ||+++++++.++.+|++++|+.|++||+.|+.++.++|.++|++++++|+++
T Consensus 30 ~~~~~~~i~g~~~~~--~~~~~~~~P~~~~~~i~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~ 107 (511)
T TIGR01237 30 GKTYPLYINGEYVET--ENKIDSINPCDPSEVVGKVGKASVEQAEHALQIAKKAFEAWKKTPVRERAGILRKAAAIMERR 107 (511)
T ss_pred ccccceeECCEEecC--CCeEEeECCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHC
Confidence 355678999999975 3569999999 5999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCccccCCCCCCcceeeeccceeEEEECCCCcchhchHHH
Q 001665 278 IDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWM 357 (1035)
Q Consensus 278 ~e~La~~i~~etGk~~~eA~~EV~~a~~~l~~~~~~a~~~~g~~~~~~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~ 357 (1035)
+++|++++++|+||++.+++.|+..+++.++++++.+....+........+...+++++|+|||++|+|||||+.+++++
T Consensus 108 ~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~~~ 187 (511)
T TIGR01237 108 RHELNALICLEVGKIIPEADAEVAEAIDFCEYYAREMERLAGQGVNLDIEGETNRYFYQPRGVAVVISPWNFPMAIAVGM 187 (511)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecceeEEEECCCCcHHHHHHHH
Confidence 99999999999999999999999999999999998776665433322234556788899999999999999999999999
Q ss_pred HHHHHhcCCEEEEeCCCCChhHHHHHHHHHHHhCCCCCcEEEeecc-hhhHhhhhcCCCccEEEEeccchHHHHHHHHHH
Q 001665 358 FSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGT-NDVINHICDDEDIKAISFVASSTASVQMYARAA 436 (1035)
Q Consensus 358 l~~ALaaGNaVVlKPS~~ap~ta~~L~ell~eAGlP~gvv~vV~g~-~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa 436 (1035)
+++||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+|+ .+.+..|+.|+++++|.||||+.+|+.|++.|+
T Consensus 188 i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~aa 267 (511)
T TIGR01237 188 TVAPIVTGNCVVLKPAETSTVIAAKIVEILIEAGLPPGVFQFVPGKGSEVGSYLVNHPKTHLITFTGSREVGCRIYEDAA 267 (511)
T ss_pred HHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCCCcEEEccCCCchhHHHHhcCCCCCeEEEECchHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999984 578899999999999999999999999999888
Q ss_pred ------hcCCceeecCCCcceEEEcCCCCHHHHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHhccccc
Q 001665 437 ------ARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNV 509 (1035)
Q Consensus 437 ------~~l~Pv~lElGGknp~IV~~dADld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~ 509 (1035)
++++|+++|||||||+||++|||++.|++.|++++|+|+||.|+++++|||+++++ +|+++|+++++++++|+
T Consensus 268 ~~~~~~~~~~~~~lElgG~~p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~g~ 347 (511)
T TIGR01237 268 KVQPGQKHLKRVIAEMGGKDAIIVDESADIEQAVAGAVYSAFGFTGQKCSACSRVVVLSPVYDAVVERFVEATRSLNVGP 347 (511)
T ss_pred cccccccccceeEeccCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCcccceEEEEehhHHHHHHHHHHHHHHhCCCCC
Confidence 58899999999999999999999999999999999999999999999999999998 89999999999999999
Q ss_pred CCCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEe
Q 001665 510 GTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQ 589 (1035)
Q Consensus 510 p~d~~~~~Gpli~~~~~~rl~~~i~~av~~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~ 589 (1035)
|.++++++||++++.+++++.+++++++++| ++++||.. ....|+|++||||.+++++|.+++||+||||++|++
T Consensus 348 ~~~~~~~~gpli~~~~~~~v~~~i~~a~~~g-~~l~gg~~----~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPVl~v~~ 422 (511)
T TIGR01237 348 TDDPSTQVGPVIDQKSQAKIQEYIEQGKAEG-ELAIGGCD----APSEGYFIGPTIFKDVDRHARLAQEEIFGPVVAIIR 422 (511)
T ss_pred CCCCCCcCCCCCCHHHHHHHHHHHHHHHHCC-cEEECCcc----CCCCCeEEcCEEEeCCCCCChHhhCCCcCCeEEEEe
Confidence 9999999999999999999999999999999 88888864 123689999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHhcCCCcEEEEEcCCHHHHHHHHhccceeEEEEcCCc-----C-CCCCCCCCCCCCC-cCcHHHHHhcc
Q 001665 590 ADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPV-----P-SSFSSINESGEFN-FCGKSGVQFYT 662 (1035)
Q Consensus 590 ~~d~eeAI~laN~~~~GLsasVfS~d~~~a~~~a~~l~sG~V~IN~~~-----~-~PfGG~g~SG~G~-~~G~~g~~~ft 662 (1035)
|+|++|||+++|+++|||+++|||+|.+.+.+++.++++|+|+||+.. . +||||+|.||+|+ .+|.+++++||
T Consensus 423 ~~~~deai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~~~ 502 (511)
T TIGR01237 423 AADFDEALEIANGTEYGLTGGVYSNTRDHIERAAAEFEVGNLYFNRTITGAIVGRQPFGGFKMSGTDSKAGGPDYLLQFM 502 (511)
T ss_pred eCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCCcCCCHHHHHHhc
Confidence 999999999999999999999999999999999999999999999752 2 7999999999996 68999999999
Q ss_pred eeeEEEEec
Q 001665 663 QIKTVAQQW 671 (1035)
Q Consensus 663 ~~k~v~~~~ 671 (1035)
+.|++..+|
T Consensus 503 ~~k~v~~~~ 511 (511)
T TIGR01237 503 QPKTVTENI 511 (511)
T ss_pred ceEEEEEeC
Confidence 999998764
|
This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs. |
| >cd07088 ALDH_LactADH-AldA Escherichia coli lactaldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-86 Score=779.70 Aligned_cols=461 Identities=36% Similarity=0.502 Sum_probs=434.2
Q ss_pred EEcCEEecCCCCCeEEeecCCCCCeEEEecCCCHHHHHHHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHHhHHHHHHH
Q 001665 205 FIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMN 284 (1035)
Q Consensus 205 ~I~G~~~~~~~~~~~~v~nP~tGevi~~v~~~s~~dv~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e~La~~ 284 (1035)
||||+|+.+.++..++++||+||+++++++.++.++++++|++|++||+.|+.++.++|.++|+++++.|+++.++|+++
T Consensus 1 ~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~ 80 (468)
T cd07088 1 YINGEFVPSSSGETIDVLNPATGEVVATVPAATAEDADRAVDAAEAAQKAWERLPAIERAAYLRKLADLIRENADELAKL 80 (468)
T ss_pred CCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 69999997656788999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCccccCCCCCCcceeeeccceeEEEECCCCcchhchHHHHHHHHhc
Q 001665 285 ITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTC 364 (1035)
Q Consensus 285 i~~etGk~~~eA~~EV~~a~~~l~~~~~~a~~~~g~~~~~~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~ALaa 364 (1035)
+++|+||+..+++.|+..+++.+++++.++....+...+....+...+.+++|+|||++|+|||||+.++++++++||++
T Consensus 81 ~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~a~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~a 160 (468)
T cd07088 81 IVEEQGKTLSLARVEVEFTADYIDYMAEWARRIEGEIIPSDRPNENIFIFKVPIGVVAGILPWNFPFFLIARKLAPALVT 160 (468)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCccccCccccceeEEEEecceeEEEEccCchHHHHHHHHHHHHHHc
Confidence 99999999999999999999999999887766555433322235567788999999999999999999999999999999
Q ss_pred CCEEEEeCCCCChhHHHHHHHHHHHhCCCCCcEEEeecch-hhHhhhhcCCCccEEEEeccchHHHHHHHHHHhcCCcee
Q 001665 365 GNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGTN-DVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQ 443 (1035)
Q Consensus 365 GNaVVlKPS~~ap~ta~~L~ell~eAGlP~gvv~vV~g~~-e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~l~Pv~ 443 (1035)
||+||+|||+.+|.++..|+++|.++|+|+|+||+|+|+. +.+..|+.|+++|+|+||||+.+|+.|++.++++++|++
T Consensus 161 GN~VVlKps~~~p~~~~~l~~~~~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~ 240 (468)
T cd07088 161 GNTIVIKPSEETPLNALEFAELVDEAGLPAGVLNIVTGRGSVVGDALVAHPKVGMISLTGSTEAGQKIMEAAAENITKVS 240 (468)
T ss_pred CCEEEEECCCcchHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEE
Confidence 9999999999999999999999999999999999999965 577899999999999999999999999999999999999
Q ss_pred ecCCCcceEEEcCCCCHHHHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHhcccccCCCCCCCcCCCcC
Q 001665 444 SNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDASADVGPVVS 522 (1035)
Q Consensus 444 lElGGknp~IV~~dADld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d~~~~~Gpli~ 522 (1035)
+|+|||||+||++|||++.|++.+++++|+|+||.|+++++|||+++++ +|+++|+++++++++|+|.++++++||+++
T Consensus 241 lelGG~~~~iV~~dadl~~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~ 320 (468)
T cd07088 241 LELGGKAPAIVMKDADLDLAVKAIVDSRIINCGQVCTCAERVYVHEDIYDEFMEKLVEKMKAVKVGDPFDAATDMGPLVN 320 (468)
T ss_pred EECCCCCeEEECCCCCHHHHHHHHHHHHhcccCcCCcCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCccCcccC
Confidence 9999999999999999999999999999999999999999999999998 999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHCCCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecCCHHHHHHHHHh
Q 001665 523 VEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNR 602 (1035)
Q Consensus 523 ~~~~~rl~~~i~~av~~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI~laN~ 602 (1035)
+.+++++.++|++++++||++++||.... ...|+|++|||+.++++++.+++||+||||++|++|+|++|||+++|+
T Consensus 321 ~~~~~~~~~~i~~a~~~ga~vl~gg~~~~---~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~ 397 (468)
T cd07088 321 EAALDKVEEMVERAVEAGATLLTGGKRPE---GEKGYFYEPTVLTNVRQDMEIVQEEIFGPVLPVVKFSSLDEAIELAND 397 (468)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEeCCCCCC---CCCceeEcCEEEecCCCCCchhhCCCcCCeEEEEecCCHHHHHHHHhC
Confidence 99999999999999999999999986421 136899999999999999999999999999999999999999999999
Q ss_pred cCCCcEEEEEcCCHHHHHHHHhccceeEEEEcCCcC----CCCCCCCCCCCCCcCcHHHHHhcceeeEEE
Q 001665 603 NRFVNGASIFTSSGLAARKFQNEIEARLVGINVPVP----SSFSSINESGEFNFCGKSGVQFYTQIKTVA 668 (1035)
Q Consensus 603 ~~~GLsasVfS~d~~~a~~~a~~l~sG~V~IN~~~~----~PfGG~g~SG~G~~~G~~g~~~ft~~k~v~ 668 (1035)
++|||+++|||+|.+.++++++++++|.|+||+... .||||+|.||+|+++|.+|+++||+.|++.
T Consensus 398 ~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~k~SG~G~~~g~~~l~~~t~~k~v~ 467 (468)
T cd07088 398 SEYGLTSYIYTENLNTAMRATNELEFGETYINRENFEAMQGFHAGWKKSGLGGADGKHGLEEYLQTKVVY 467 (468)
T ss_pred CCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccccCCcCchHHHHHHHhceeEEe
Confidence 999999999999999999999999999999998642 799999999999999999999999999885
|
Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. |
| >cd07151 ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-85 Score=777.59 Aligned_cols=455 Identities=31% Similarity=0.464 Sum_probs=428.4
Q ss_pred CEEecCCCCCeEEeecCCCCCeEEEecCCCHHHHHHHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q 001665 208 GKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITV 287 (1035)
Q Consensus 208 G~~~~~~~~~~~~v~nP~tGevi~~v~~~s~~dv~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e~La~~i~~ 287 (1035)
|+|+.+.++..++++||+||+++++++.++.+++++++++|++||+.|+.++.++|.++|++++++|++++++|++++++
T Consensus 1 g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~ 80 (465)
T cd07151 1 GEWRDGTSERTIDVLNPYTGETLAEIPAASKEDVDEAYRAAAAAQKEWAATLPQERAEILEKAAQILEERRDEIVEWLIR 80 (465)
T ss_pred CCceeCCCCCeEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 56776655678999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCccccCCCCCCcceeeeccceeEEEECCCCcchhchHHHHHHHHhcCCE
Q 001665 288 EQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNT 367 (1035)
Q Consensus 288 etGk~~~eA~~EV~~a~~~l~~~~~~a~~~~g~~~~~~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~ALaaGNa 367 (1035)
|+||++.++..|+..+++.+++++.......+...+....+...+++++|+|||++|+|||||+.+.++++++||++||+
T Consensus 81 e~Gk~~~~a~~Ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~ 160 (465)
T cd07151 81 ESGSTRIKANIEWGAAMAITREAATFPLRMEGRILPSDVPGKENRVYREPLGVVGVISPWNFPLHLSMRSVAPALALGNA 160 (465)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHhHHHhcCccccCCCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCE
Confidence 99999999999999999999999887766554433332345556788999999999999999999999999999999999
Q ss_pred EEEeCCCCChhHH-HHHHHHHHHhCCCCCcEEEeecc-hhhHhhhhcCCCccEEEEeccchHHHHHHHHHHhcCCceeec
Q 001665 368 FILKPSEKNPGTS-MILAALAMEAGLPDGVLNIVHGT-NDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSN 445 (1035)
Q Consensus 368 VVlKPS~~ap~ta-~~L~ell~eAGlP~gvv~vV~g~-~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~l~Pv~lE 445 (1035)
||+|||+.+|.++ .+|.+++.++|+|+|+||+|+|+ .+.+..|+.|+.+++|+||||+.+|+.|+++|+++++|+++|
T Consensus 161 Vi~Kps~~~p~~~~~~l~~~l~~aG~P~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~~~lE 240 (465)
T cd07151 161 VVLKPASDTPITGGLLLAKIFEEAGLPKGVLNVVVGAGSEIGDAFVEHPVPRLISFTGSTPVGRHIGELAGRHLKKVALE 240 (465)
T ss_pred EEEECCCCCcHhHHHHHHHHHHHcCcCccceEEEecCchhhHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCcEEEE
Confidence 9999999999996 68999999999999999999985 577899999999999999999999999999999999999999
Q ss_pred CCCcceEEEcCCCCHHHHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHhcccccCCCCCCCcCCCcCHH
Q 001665 446 RGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDASADVGPVVSVE 524 (1035)
Q Consensus 446 lGGknp~IV~~dADld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d~~~~~Gpli~~~ 524 (1035)
+|||||+||++|||++.|++.+++++|+|+||.|+++++|||+++++ +|+++|+++++++++|+|.++++.+||++++.
T Consensus 241 lGGk~p~iV~~daDl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~ 320 (465)
T cd07151 241 LGGNNPFVVLEDADIDAAVNAAVFGKFLHQGQICMAINRIIVHEDVYDEFVEKFVERVKALPYGDPSDPDTVVGPLINES 320 (465)
T ss_pred CCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHH
Confidence 99999999999999999999999999999999999999999999998 99999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHCCCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecCCHHHHHHHHHhcC
Q 001665 525 VKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNR 604 (1035)
Q Consensus 525 ~~~rl~~~i~~av~~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI~laN~~~ 604 (1035)
+++++.+++++++++|+++++||.. .|+|++|||+.++++++.+++||+||||++|++|+|+||||+++|+++
T Consensus 321 ~~~~v~~~v~~a~~~ga~vl~gg~~-------~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~ 393 (465)
T cd07151 321 QVDGLLDKIEQAVEEGATLLVGGEA-------EGNVLEPTVLSDVTNDMEIAREEIFGPVAPIIKADDEEEALELANDTE 393 (465)
T ss_pred HHHHHHHHHHHHHhCCCEEEecCCc-------CCEEEccEEEeCCCCCCchhhCcCcCCeEEEEeeCCHHHHHHHHhCCC
Confidence 9999999999999999999999852 588999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEEcCCHHHHHHHHhccceeEEEEcCCc----C-CCCCCCCCCCCCCcCcHHHHHhcceeeEEEE
Q 001665 605 FVNGASIFTSSGLAARKFQNEIEARLVGINVPV----P-SSFSSINESGEFNFCGKSGVQFYTQIKTVAQ 669 (1035)
Q Consensus 605 ~GLsasVfS~d~~~a~~~a~~l~sG~V~IN~~~----~-~PfGG~g~SG~G~~~G~~g~~~ft~~k~v~~ 669 (1035)
|||+++|||+|.++++++++++++|.|+||+.. . +||||+|.||+|+++|.+++++|++.|++++
T Consensus 394 ~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~~~~ 463 (465)
T cd07151 394 YGLSGAVFTSDLERGVQFARRIDAGMTHINDQPVNDEPHVPFGGEKNSGLGRFNGEWALEEFTTDKWISV 463 (465)
T ss_pred ccceEEEECCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCcccccCCcCChHHHHHHhhceEEEEe
Confidence 999999999999999999999999999999752 1 8999999999999999999999999999865
|
NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. |
| >TIGR01236 D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-85 Score=784.96 Aligned_cols=469 Identities=24% Similarity=0.318 Sum_probs=433.5
Q ss_pred CCCCccceEEcCEEecCCCCCeEEeecCCC-CCeEEEecCCCHHHHHHHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHH
Q 001665 197 IDNNRVSNFIGGKFVDLRGSATIDVINPAT-QEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIR 275 (1035)
Q Consensus 197 ~~~~~~~~~I~G~~~~~~~~~~~~v~nP~t-Gevi~~v~~~s~~dv~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~ 275 (1035)
.++..+++||||+|+.+ ++..++++||+| |+++++++.++.+|+++|+++|++||+.|+.++..+|.++|++++++|+
T Consensus 27 ~~~~~~~~~i~G~~~~~-~~~~~~~~nP~t~g~~i~~~~~~~~~~v~~av~~A~~a~~~W~~~~~~~R~~~L~k~a~~l~ 105 (533)
T TIGR01236 27 SHPIEIPLVIGGEEVMG-SGERIDQVQPHNHQAVLAKATNATEEDAAKAVEAALDAKKDWSALPFYDRAAIFLKAADLLS 105 (533)
T ss_pred hcCeeeceeECCEEecC-CCCEEEEECCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHH
Confidence 34578889999999975 456899999997 8999999999999999999999999999999999999999999999999
Q ss_pred -HhHHHHHHHHHHHhCCCHHHHHHH-HHHHHHHHHHHHHHHHhhcCccccCCCCCCcceeeeccc-eeEEEECCCCcchh
Q 001665 276 -RDIDKLAMNITVEQGTTLKAAQRD-VLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPL-GVCAGICPFNFPDM 352 (1035)
Q Consensus 276 -~~~e~La~~i~~etGk~~~eA~~E-V~~a~~~l~~~~~~a~~~~g~~~~~~~~g~~~~~~~ePl-GVV~iI~P~N~Pl~ 352 (1035)
+++++|++++++|+||++.+++.| +..+++.+++++..+....+........+...++.++|+ |||++|+|||||+.
T Consensus 106 ~~~~~~la~~~~~e~GK~~~~a~~e~v~~~i~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwN~P~~ 185 (533)
T TIGR01236 106 GPYREEILAATMLGQSKNVYQAEIDAVAELIDFFRFNVKYARELYEQQPSESAPGEWNRTDYRPLEGFVYAISPFNFTAI 185 (533)
T ss_pred hhcHHHHHHHHHHHcCCcHHHHhHhHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecCCCEEEEEeCCchHHH
Confidence 599999999999999999999886 999999999998877665443221112344578889999 99999999999999
Q ss_pred chHHHHHHHHhcCCEEEEeCCCCChhHHHHHHHHHHHhCCCCCcEEEeecc-hhhHhhhhcCCCccEEEEeccchHHHHH
Q 001665 353 TPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGT-NDVINHICDDEDIKAISFVASSTASVQM 431 (1035)
Q Consensus 353 ~~~~~l~~ALaaGNaVVlKPS~~ap~ta~~L~ell~eAGlP~gvv~vV~g~-~e~~~~L~~h~~vd~V~fTGS~~vG~~I 431 (1035)
...+++++|| +||+||+|||+.+|+++.+|+++|.++|+|+|+||+|+|+ .+.+..|+.|++|++|+||||+.+|+.|
T Consensus 186 ~~~~~~a~AL-aGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~g~~Lv~~p~v~~V~FTGS~~~G~~i 264 (533)
T TIGR01236 186 AGNLPGAPAL-MGNTVIWKPSITATLSNYLTMRILEEAGLPPGVINFVPGDGFAVSDVVLADPRLAGIHFTGSTATFKHL 264 (533)
T ss_pred HHHHHHHHHH-hCCeEEEECCCcCCHHHHHHHHHHHhcCCCCCcEEEEecCcHHHHHHHhcCCCcCEEEEECCHHHHHHH
Confidence 9999999999 7999999999999999999999999999999999999995 5788899999999999999999999999
Q ss_pred HHHHHhcCCc------eeecCCCcceEEEcCCCCHHHHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHh
Q 001665 432 YARAAARGKR------VQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKA 504 (1035)
Q Consensus 432 ~~aAa~~l~P------v~lElGGknp~IV~~dADld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~ 504 (1035)
++.++++++| +++|+|||||+||++|||++.|++.+++|+|.|+||.|+++++|||+++++ +|+++|++++++
T Consensus 265 ~~~aa~~l~~~~~~~~v~lElGGknp~IV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~ 344 (533)
T TIGR01236 265 WKWVASNLDRYHNFPRIVGETGGKDFHVVHPSADIDHAVTATIRGAFEYQGQKCSAASRLYVPHSVWPRFKDELLAELAE 344 (533)
T ss_pred HHHHHhhccccccCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhhCCCCCcCCeeEEEchhHHHHHHHHHHHHHhc
Confidence 9999999874 999999999999999999999999999999999999999999999999998 999999999999
Q ss_pred cccccCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCC--CcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccC
Q 001665 505 LKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNG--ASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFG 582 (1035)
Q Consensus 505 lkvG~p~d~~~~~Gpli~~~~~~rl~~~i~~av~~G--Akvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFG 582 (1035)
+++|+|.++++++||++++.+++++.++|++++++| |++++||.. ....|+|++||||.+++++|.+++||+||
T Consensus 345 l~~G~p~d~~t~~Gpli~~~~~~~v~~~i~~a~~~Ga~a~vl~GG~~----~~~~G~~~~PTvl~~~~~d~~i~~eE~FG 420 (533)
T TIGR01236 345 VKVGDPDDFSNFMGAVIDERSFVKNVKYIERAKGDPAELTILYGGKY----DDSEGYFVEPTVILSKDPTDPLMVEEIFG 420 (533)
T ss_pred CCcCCCCCCCCcccccCCHHHHHHHHHHHHHHHhcCCceEEEeCCCc----CCCCCeEEeeEEEecCCCCChhhcccCCC
Confidence 999999999999999999999999999999999997 799999864 12358999999999999999999999999
Q ss_pred cceeEEecCC--HHHHHHHH-HhcCCCcEEEEEcCCHHHHHHHHhccc--eeEEEEcCCc-----C-CCCCCCCCCCCC-
Q 001665 583 PVLLNMQADS--LEEAIKMV-NRNRFVNGASIFTSSGLAARKFQNEIE--ARLVGINVPV-----P-SSFSSINESGEF- 650 (1035)
Q Consensus 583 PVL~V~~~~d--~eeAI~la-N~~~~GLsasVfS~d~~~a~~~a~~l~--sG~V~IN~~~-----~-~PfGG~g~SG~G- 650 (1035)
||++|++|+| ++|||+++ |+++|||+++|||+|.+.+.+++++++ +|.|+||... . +||||+|.||+|
T Consensus 421 PVl~v~~~~~~~~~eai~~~~n~~~~gL~a~Vft~d~~~a~~~~~~l~~~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~ 500 (533)
T TIGR01236 421 PVLTVYVYPDDKYKEILDVVDSTSRYGLTGAVFAKDRQAILEADKRLRFAAGNFYINDKPTGAVVGQQPFGGARGSGTND 500 (533)
T ss_pred CeEEEEEeCCCCHHHHHHHHhcCCCcCceEEEEeCCHHHHHHHHHHhhhcCcEEEECCCCCCCCCCCCCCCCcccccCCc
Confidence 9999999998 59999999 889999999999999999999999977 9999999652 2 799999999998
Q ss_pred CcCcHHHHHhcceeeEEEEec
Q 001665 651 NFCGKSGVQFYTQIKTVAQQW 671 (1035)
Q Consensus 651 ~~~G~~g~~~ft~~k~v~~~~ 671 (1035)
+.+|.+++++|++.|++....
T Consensus 501 ~~~g~~~l~~f~~~k~v~~~~ 521 (533)
T TIGR01236 501 KAGGPLNLLRWTSARSIKETF 521 (533)
T ss_pred ccCCHHHHHHhcceEEEEEEc
Confidence 899999999999999998764
|
This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate. |
| >cd07139 ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-85 Score=778.63 Aligned_cols=463 Identities=31% Similarity=0.439 Sum_probs=431.5
Q ss_pred eEEcCEEecCCCCCeEEeecCCCCCeEEEecCCCHHHHHHHHHHHHHhhHh--hhCCCHHHHHHHHHHHHHHHHHhHHHH
Q 001665 204 NFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPA--WKNTPVATRQRIMFKLQELIRRDIDKL 281 (1035)
Q Consensus 204 ~~I~G~~~~~~~~~~~~v~nP~tGevi~~v~~~s~~dv~~av~~Ar~A~~~--W~~~s~~~R~~iL~~la~~L~~~~e~L 281 (1035)
+||||+|+.+.++..++++||+||+++++++.++.+|++.++++|++||+. |+.++.++|.++|++++++|+++.++|
T Consensus 1 ~~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~a~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~el 80 (471)
T cd07139 1 LFIGGRWVAPSGSETIDVVSPATEEVVGRVPEATPADVDAAVAAARRAFDNGPWPRLSPAERAAVLRRLADALEARADEL 80 (471)
T ss_pred CeECCEeecCCCCCeEEeECCCCCCEeEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 489999997655678999999999999999999999999999999999985 999999999999999999999999999
Q ss_pred HHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHhhcCccccCCCCCCcceeeeccceeEEEECCCCcchhchHHHHHH
Q 001665 282 AMNITVEQGTTLKAAQ-RDVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSI 360 (1035)
Q Consensus 282 a~~i~~etGk~~~eA~-~EV~~a~~~l~~~~~~a~~~~g~~~~~~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~ 360 (1035)
++++++|+||+..++. .|+..++..++++++.+....+........+...+++++|+|||++|+|||||+.++++++++
T Consensus 81 a~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~i~~ 160 (471)
T cd07139 81 ARLWTAENGMPISWSRRAQGPGPAALLRYYAALARDFPFEERRPGSGGGHVLVRREPVGVVAAIVPWNAPLFLAALKIAP 160 (471)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCceEEEEEEeccEEEEEcCCchHHHHHHHHHHH
Confidence 9999999999998775 489999999999988766543321111112445678899999999999999999999999999
Q ss_pred HHhcCCEEEEeCCCCChhHHHHHHHHHHHhCCCCCcEEEeecchhhHhhhhcCCCccEEEEeccchHHHHHHHHHHhcCC
Q 001665 361 AVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAARGK 440 (1035)
Q Consensus 361 ALaaGNaVVlKPS~~ap~ta~~L~ell~eAGlP~gvv~vV~g~~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~l~ 440 (1035)
||++||+||+|||+.+|+++..|.++|.++|+|+|+||+|+|+.+.+..|+.|+++++|+||||+.+|+.|++.++++++
T Consensus 161 ALaaGN~VvlKps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~~~~~~~~ 240 (471)
T cd07139 161 ALAAGCTVVLKPSPETPLDAYLLAEAAEEAGLPPGVVNVVPADREVGEYLVRHPGVDKVSFTGSTAAGRRIAAVCGERLA 240 (471)
T ss_pred HHhcCCEEEEECCCcCCHHHHHHHHHHHHcCCCCCcEEEEeCCHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999977888999999999999999999999999999999999
Q ss_pred ceeecCCCcceEEEcCCCCHHHHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHhcccccCCCCCCCcCC
Q 001665 441 RVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDASADVGP 519 (1035)
Q Consensus 441 Pv~lElGGknp~IV~~dADld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d~~~~~Gp 519 (1035)
|+++|+|||||+||++|||++.|++.|++++|+|+||.|+++++|||+++++ +|+++|+++++++++|+|.++++++||
T Consensus 241 ~~~lElGG~np~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gp 320 (471)
T cd07139 241 RVTLELGGKSAAIVLDDADLDAAVPGLVPASLMNNGQVCVALTRILVPRSRYDEVVEALAAAVAALKVGDPLDPATQIGP 320 (471)
T ss_pred EEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999998 999999999999999999999999999
Q ss_pred CcCHHHHHHHHHHHHHHHHCCCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecCCHHHHHHH
Q 001665 520 VVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKM 599 (1035)
Q Consensus 520 li~~~~~~rl~~~i~~av~~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI~l 599 (1035)
++++.+++++.++|++++.+|+++++||.... ....|+|++||||.++++++++++||+||||++|++|+|+||||++
T Consensus 321 li~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~--~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~ 398 (471)
T cd07139 321 LASARQRERVEGYIAKGRAEGARLVTGGGRPA--GLDRGWFVEPTLFADVDNDMRIAQEEIFGPVLSVIPYDDEDDAVRI 398 (471)
T ss_pred CCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCC--CCCCCeEEccEEEecCCCcchHHhCccCCCeEEEeecCCHHHHHHH
Confidence 99999999999999999999999999986421 1135899999999999999999999999999999999999999999
Q ss_pred HHhcCCCcEEEEEcCCHHHHHHHHhccceeEEEEcCCcC---CCCCCCCCCCCCCcCcHHHHHhcceeeEEE
Q 001665 600 VNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPVP---SSFSSINESGEFNFCGKSGVQFYTQIKTVA 668 (1035)
Q Consensus 600 aN~~~~GLsasVfS~d~~~a~~~a~~l~sG~V~IN~~~~---~PfGG~g~SG~G~~~G~~g~~~ft~~k~v~ 668 (1035)
+|+++|||+++|||+|.+++.++++++++|.|+||+... +||||+|.||+|+++|++|+++||+.|+++
T Consensus 399 ~n~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~iN~~~~~~~~PfgG~k~SG~G~~~g~~~~~~ft~~k~i~ 470 (471)
T cd07139 399 ANDSDYGLSGSVWTADVERGLAVARRIRTGTVGVNGFRLDFGAPFGGFKQSGIGREGGPEGLDAYLETKSIY 470 (471)
T ss_pred HhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCcccccCCccchHHHHHHHhceeEEe
Confidence 999999999999999999999999999999999998632 899999999999999999999999999985
|
The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. |
| >PRK09847 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-85 Score=778.16 Aligned_cols=465 Identities=28% Similarity=0.431 Sum_probs=434.6
Q ss_pred CCccceEEcCEEecCCCCCeEEeecCCCCCeEEEecCCCHHHHHHHHHHHHHhhH--hhhCCCHHHHHHHHHHHHHHHHH
Q 001665 199 NNRVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFP--AWKNTPVATRQRIMFKLQELIRR 276 (1035)
Q Consensus 199 ~~~~~~~I~G~~~~~~~~~~~~v~nP~tGevi~~v~~~s~~dv~~av~~Ar~A~~--~W~~~s~~~R~~iL~~la~~L~~ 276 (1035)
+..+++||||+|+.+.++..++++||+||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|++++++|++
T Consensus 17 ~~~~~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~v~~~~~~dv~~av~aA~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~ 96 (494)
T PRK09847 17 AIENRLFINGEYTAAAENETFETVDPVTQAPLAKIARGKSVDIDRAVSAARGVFERGDWSLSSPAKRKAVLNKLADLMEA 96 (494)
T ss_pred ccccCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHH
Confidence 5666789999999876678899999999999999999999999999999999997 59999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHhhcCccccCCCCCCcceeeeccceeEEEECCCCcchhchH
Q 001665 277 DIDKLAMNITVEQGTTLKAAQ-RDVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPL 355 (1035)
Q Consensus 277 ~~e~La~~i~~etGk~~~eA~-~EV~~a~~~l~~~~~~a~~~~g~~~~~~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~ 355 (1035)
+.++|++++++|+||++.++. .|+..+++.++++++.+....++..+.. .+...+++++|+|||++|+|||||+.+++
T Consensus 97 ~~~ela~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~-~~~~~~~~~~P~GVv~~I~PwN~P~~~~~ 175 (494)
T PRK09847 97 HAEELALLETLDTGKPIRHSLRDDIPGAARAIRWYAEAIDKVYGEVATTS-SHELAMIVREPVGVIAAIVPWNFPLLLTC 175 (494)
T ss_pred hHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCC-CCceeEEEecceeEEEEECCCccHHHHHH
Confidence 999999999999999999875 5999999999999987776655433322 23345788999999999999999999999
Q ss_pred HHHHHHHhcCCEEEEeCCCCChhHHHHHHHHHHHhCCCCCcEEEeecc-hhhHhhhhcCCCccEEEEeccchHHHHHHHH
Q 001665 356 WMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGT-NDVINHICDDEDIKAISFVASSTASVQMYAR 434 (1035)
Q Consensus 356 ~~l~~ALaaGNaVVlKPS~~ap~ta~~L~ell~eAGlP~gvv~vV~g~-~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~a 434 (1035)
+++++||++||+||+|||+.+|.++..|++++.++|+|+|+||+|+|. .+.+..|+.|+++|+|+||||+.+|+.|++.
T Consensus 176 ~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~v~fTGs~~~g~~v~~~ 255 (494)
T PRK09847 176 WKLGPALAAGNSVILKPSEKSPLSAIRLAGLAKEAGLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQLLKD 255 (494)
T ss_pred HHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHcCcCcCcEEEEeCCChhHHHHHhcCCCCCEEEEECCHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999984 5778999999999999999999999999999
Q ss_pred HH-hcCCceeecCCCcceEEEcCCC-CHHHHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHhcccccCC
Q 001665 435 AA-ARGKRVQSNRGGKNYAIIMPDA-SIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGT 511 (1035)
Q Consensus 435 Aa-~~l~Pv~lElGGknp~IV~~dA-Dld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~ 511 (1035)
|+ +.++|+++|+|||||+||.+|+ |++.|++.+++++|+|+||.|+++++|||+++++ +|+++|+++++.+++|+|.
T Consensus 256 aa~~~~~~~~lElGGk~~~iV~~daaDl~~Aa~~i~~~~~~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~ 335 (494)
T PRK09847 256 AGDSNMKRVWLEAGGKSANIVFADCPDLQQAASATAAGIFYNQGQVCIAGTRLLLEESIADEFLALLKQQAQNWQPGHPL 335 (494)
T ss_pred hhhhCCCeEEEecCCCCeeEEcCCccCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 88 5899999999999999999997 9999999999999999999999999999999998 8999999999999999999
Q ss_pred CCCCCcCCCcCHHHHHHHHHHHHHHHHCCCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecC
Q 001665 512 DASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQAD 591 (1035)
Q Consensus 512 d~~~~~Gpli~~~~~~rl~~~i~~av~~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~ 591 (1035)
++++.+||++++.+++++.++|++++++| ++++||.. ...+.|++|||+.++++++++++||+||||++|++|+
T Consensus 336 ~~~~~~gpli~~~~~~~v~~~v~~a~~~G-~i~~gg~~-----~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~ 409 (494)
T PRK09847 336 DPATTMGTLIDCAHADSVHSFIREGESKG-QLLLDGRN-----AGLAAAIGPTIFVDVDPNASLSREEIFGPVLVVTRFT 409 (494)
T ss_pred CCCCcCCCCcCHHHHHHHHHHHHHHHHCC-eEEECCcc-----CCCCceEeeEEEeCCCCCChHHhCcCcCceEEEEecC
Confidence 99999999999999999999999999999 99999864 1357899999999999999999999999999999999
Q ss_pred CHHHHHHHHHhcCCCcEEEEEcCCHHHHHHHHhccceeEEEEcCCc----CCCCCCCCCCCCCCcCcHHHHHhcceeeEE
Q 001665 592 SLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPV----PSSFSSINESGEFNFCGKSGVQFYTQIKTV 667 (1035)
Q Consensus 592 d~eeAI~laN~~~~GLsasVfS~d~~~a~~~a~~l~sG~V~IN~~~----~~PfGG~g~SG~G~~~G~~g~~~ft~~k~v 667 (1035)
|++|||+++|+++|||+++|||+|.+.+.++++++++|+|+||+.. .+||||+|.||+|+++|.+|+++|++.|+|
T Consensus 410 ~~~eai~~~n~~~~gLsa~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~ft~~k~v 489 (494)
T PRK09847 410 SEEQALQLANDSQYGLGAAVWTRDLSRAHRMSRRLKAGSVFVNNYNDGDMTVPFGGYKQSGNGRDKSLHALEKFTELKTI 489 (494)
T ss_pred CHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCCcccccCccchHHHHHHhhceEEE
Confidence 9999999999999999999999999999999999999999999853 289999999999999999999999999998
Q ss_pred EEe
Q 001665 668 AQQ 670 (1035)
Q Consensus 668 ~~~ 670 (1035)
++.
T Consensus 490 ~~~ 492 (494)
T PRK09847 490 WIS 492 (494)
T ss_pred EEe
Confidence 753
|
|
| >cd07138 ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric acid dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-85 Score=775.57 Aligned_cols=459 Identities=33% Similarity=0.488 Sum_probs=429.6
Q ss_pred eEEcCEEecCCCCCeEEeecCCCCCeEEEecCCCHHHHHHHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHHhHHHHHH
Q 001665 204 NFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAM 283 (1035)
Q Consensus 204 ~~I~G~~~~~~~~~~~~v~nP~tGevi~~v~~~s~~dv~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e~La~ 283 (1035)
+||||+|+.+.++..++++||+||+++++++.++.+++++++++|++||+.|++++.++|.++|++++++|+++.++|++
T Consensus 1 ~~i~g~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~ 80 (466)
T cd07138 1 FYIDGAWVAPAGTETIDVINPATEEVIGTVPLGTAADVDRAVAAARRAFPAWSATSVEERAALLERIAEAYEARADELAQ 80 (466)
T ss_pred CeECCEeecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 58999999876667899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHhhcCccccCCCCCCcceeeeccceeEEEECCCCcchhchHHHHHHHH
Q 001665 284 NITVEQGTTLKAAQ-RDVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAV 362 (1035)
Q Consensus 284 ~i~~etGk~~~eA~-~EV~~a~~~l~~~~~~a~~~~g~~~~~~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~AL 362 (1035)
++++|+||+..+++ .|+..+++.++++++..+...+.. .....+.+++|+|||++|+|||||+.++++++++||
T Consensus 81 ~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~AL 155 (466)
T cd07138 81 AITLEMGAPITLARAAQVGLGIGHLRAAADALKDFEFEE-----RRGNSLVVREPIGVCGLITPWNWPLNQIVLKVAPAL 155 (466)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhhhccccc-----cCceEEEEEeecceEEEECCCccHHHHHHHHHHHHH
Confidence 99999999999886 488899999999887665443321 122456789999999999999999999999999999
Q ss_pred hcCCEEEEeCCCCChhHHHHHHHHHHHhCCCCCcEEEeecch-hhHhhhhcCCCccEEEEeccchHHHHHHHHHHhcCCc
Q 001665 363 TCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGTN-DVINHICDDEDIKAISFVASSTASVQMYARAAARGKR 441 (1035)
Q Consensus 363 aaGNaVVlKPS~~ap~ta~~L~ell~eAGlP~gvv~vV~g~~-e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~l~P 441 (1035)
++||+||+|||+.+|+++.+|+++|.++|+|+|+||+|+|+. +.+..|+.|+++++|+||||+.+|+.|++.++.+++|
T Consensus 156 aaGN~Vv~Kps~~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~ 235 (466)
T cd07138 156 AAGCTVVLKPSEVAPLSAIILAEILDEAGLPAGVFNLVNGDGPVVGEALSAHPDVDMVSFTGSTRAGKRVAEAAADTVKR 235 (466)
T ss_pred hcCCEEEEECCCcCcHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCCe
Confidence 999999999999999999999999999999999999999855 6789999999999999999999999999999999999
Q ss_pred eeecCCCcceEEEcCCCCHHHHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHhcccccCCCCCCCcCCC
Q 001665 442 VQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDASADVGPV 520 (1035)
Q Consensus 442 v~lElGGknp~IV~~dADld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d~~~~~Gpl 520 (1035)
+++|+|||||+||++|||++.|++.+++++|+++||.|+++++|||+++++ +|+++|+++++.+++|+|.++++++||+
T Consensus 236 v~lElgG~~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpl 315 (466)
T cd07138 236 VALELGGKSANIILDDADLEKAVPRGVAACFANSGQSCNAPTRMLVPRSRYAEAEEIAAAAAEAYVVGDPRDPATTLGPL 315 (466)
T ss_pred EEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCCCCCcCCcc
Confidence 999999999999999999999999999999999999999999999999998 8999999999999999999999999999
Q ss_pred cCHHHHHHHHHHHHHHHHCCCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecCCHHHHHHHH
Q 001665 521 VSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMV 600 (1035)
Q Consensus 521 i~~~~~~rl~~~i~~av~~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI~la 600 (1035)
+++.+++++.+++++++++||++++||.... .....|+|++|||+.++++++++++||+||||++|++|+|+||||+++
T Consensus 316 i~~~~~~~~~~~v~~a~~~Ga~~l~gg~~~~-~~~~~g~~~~Ptvl~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~ 394 (466)
T cd07138 316 ASAAQFDRVQGYIQKGIEEGARLVAGGPGRP-EGLERGYFVKPTVFADVTPDMTIAREEIFGPVLSIIPYDDEDEAIAIA 394 (466)
T ss_pred CCHHHHHHHHHHHHHHHHCCCEEEeCCCcCC-CcCCCCceECCEEecCCCCCChHHhCCCCCceEEEeccCCHHHHHHHH
Confidence 9999999999999999999999999986321 111468999999999999999999999999999999999999999999
Q ss_pred HhcCCCcEEEEEcCCHHHHHHHHhccceeEEEEcCCcC---CCCCCCCCCCCCCcCcHHHHHhcceeeEEE
Q 001665 601 NRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPVP---SSFSSINESGEFNFCGKSGVQFYTQIKTVA 668 (1035)
Q Consensus 601 N~~~~GLsasVfS~d~~~a~~~a~~l~sG~V~IN~~~~---~PfGG~g~SG~G~~~G~~g~~~ft~~k~v~ 668 (1035)
|+++|||+++|||+|.+.+.++++++++|+|+||+... +||||+|.||+|+++|.+++++|++.|+++
T Consensus 395 n~~~~gL~a~i~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~v~ 465 (466)
T cd07138 395 NDTPYGLAGYVWSADPERARAVARRLRAGQVHINGAAFNPGAPFGGYKQSGNGREWGRYGLEEFLEVKSIQ 465 (466)
T ss_pred hCCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCCCCCCCCcCCcccccCCccchHHHHHHhcceeEEe
Confidence 99999999999999999999999999999999997532 899999999999999999999999999874
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. |
| >PRK09457 astD succinylglutamic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-85 Score=773.56 Aligned_cols=461 Identities=27% Similarity=0.374 Sum_probs=426.0
Q ss_pred ceEEcCEEecCCCCCeEEeecCCCCCeEEEecCCCHHHHHHHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHHhHHHHH
Q 001665 203 SNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLA 282 (1035)
Q Consensus 203 ~~~I~G~~~~~~~~~~~~v~nP~tGevi~~v~~~s~~dv~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e~La 282 (1035)
.+||||+|+.+. +..++++||+||+++++++.++.+++++++++|++||+.|+.++.++|.++|++++++|+++.++|+
T Consensus 2 ~~~i~g~~~~~~-~~~~~~~~P~t~~~i~~~~~a~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela 80 (487)
T PRK09457 2 TLWINGDWIAGQ-GEAFESRNPVSGEVLWQGNDATAAQVDAAVRAARAAFPAWARLSFEERQAIVERFAALLEENKEELA 80 (487)
T ss_pred CceECCEEecCC-CCEEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHhHHHHHH
Confidence 379999999763 5679999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCccccCCCCCCcceeeeccceeEEEECCCCcchhchHHHHHHHH
Q 001665 283 MNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAV 362 (1035)
Q Consensus 283 ~~i~~etGk~~~eA~~EV~~a~~~l~~~~~~a~~~~g~~~~~~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~AL 362 (1035)
+++++|+||++.+++.|+..+++.++++++......+.... ...+...+++++|+|||++|+|||||+.++++++++||
T Consensus 81 ~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~AL 159 (487)
T PRK09457 81 EVIARETGKPLWEAATEVTAMINKIAISIQAYHERTGEKRS-EMADGAAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPAL 159 (487)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCceec-cCCCceeEEEEeccEEEEEECCCchHHHHHHHHHHHHH
Confidence 99999999999999999999999999887765444443222 12344567889999999999999999999999999999
Q ss_pred hcCCEEEEeCCCCChhHHHHHHHHHHHhCCCCCcEEEeecchhhHhhhhcCCCccEEEEeccchHHHHHHHHHHhc-CCc
Q 001665 363 TCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAAR-GKR 441 (1035)
Q Consensus 363 aaGNaVVlKPS~~ap~ta~~L~ell~eAGlP~gvv~vV~g~~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~-l~P 441 (1035)
++||+||+|||+.+|.++.+|++++.++|+|+|+||+|+|+.+.+..|+.|++|++|+||||+.+|+.|+++++.+ .++
T Consensus 160 aaGN~VvlKPs~~tp~t~~~l~~l~~~aGlP~gvv~~v~g~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~~~~ 239 (487)
T PRK09457 160 LAGNTVVFKPSELTPWVAELTVKLWQQAGLPAGVLNLVQGGRETGKALAAHPDIDGLLFTGSANTGYLLHRQFAGQPEKI 239 (487)
T ss_pred HcCCEEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeCCHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhhcCCCc
Confidence 9999999999999999999999999999999999999999778889999999999999999999999999987765 578
Q ss_pred eeecCCCcceEEEcCCCCHHHHHHHHHHHHhccCCCCccCCceEEEeCccH--HHHHHHHHHHHhcccccCC-CCCCCcC
Q 001665 442 VQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV--QWEDELVELAKALKVNVGT-DASADVG 518 (1035)
Q Consensus 442 v~lElGGknp~IV~~dADld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~--~f~e~Lv~~~~~lkvG~p~-d~~~~~G 518 (1035)
+++|+|||||+||++|||++.|++.|++++|.|+||.|+++++|||+++++ +|+++|+++++++++|+|. ++.+++|
T Consensus 240 ~~lElGGk~p~IV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~d~f~~~l~~~~~~~~vG~p~~~~~~~~G 319 (487)
T PRK09457 240 LALEMGGNNPLVIDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPQGAQGDAFLARLVAVAKRLTVGRWDAEPQPFMG 319 (487)
T ss_pred EEEecCCCCeEEECCCCCHHHHHHHHHHHHhhccCCCCCCCceEEEeccccHHHHHHHHHHHHhcCcCCCCCcCCCCccC
Confidence 999999999999999999999999999999999999999999999999984 7999999999999999996 7889999
Q ss_pred CCcCHHHHHHHHHHHHHHHHCCCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecCCHHHHHH
Q 001665 519 PVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIK 598 (1035)
Q Consensus 519 pli~~~~~~rl~~~i~~av~~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI~ 598 (1035)
||++..+++++.+++++++++|+++++||... +.+|.|++|||+ +++++|.+++||+||||++|++|+|+||||+
T Consensus 320 pli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~----~~~g~~~~PTvl-~v~~~~~i~~eE~FGPVl~V~~~~~~deai~ 394 (487)
T PRK09457 320 AVISEQAAQGLVAAQAQLLALGGKSLLEMTQL----QAGTGLLTPGII-DVTGVAELPDEEYFGPLLQVVRYDDFDEAIR 394 (487)
T ss_pred CCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcc----CCCCeeEecEEe-ccCCCChHHhCCCcCCeEEEEEeCCHHHHHH
Confidence 99999999999999999999999999988642 246899999999 7999999999999999999999999999999
Q ss_pred HHHhcCCCcEEEEEcCCHHHHHHHHhccceeEEEEcCCc-----CCCCCCCCCCCCCCcCcHHHHHhcceeeEEEEec
Q 001665 599 MVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPV-----PSSFSSINESGEFNFCGKSGVQFYTQIKTVAQQW 671 (1035)
Q Consensus 599 laN~~~~GLsasVfS~d~~~a~~~a~~l~sG~V~IN~~~-----~~PfGG~g~SG~G~~~G~~g~~~ft~~k~v~~~~ 671 (1035)
++|+++|||+++|||+|.+.++++++++++|.|+||+.. .+||||+|.||+|+++|..+ .+|+..|++...+
T Consensus 395 ~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~g~~~-~~~~~~k~~~~~~ 471 (487)
T PRK09457 395 LANNTRFGLSAGLLSDDREDYDQFLLEIRAGIVNWNKPLTGASSAAPFGGVGASGNHRPSAYYA-ADYCAYPMASLES 471 (487)
T ss_pred HHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEECCCCCCCCCCCCCCcccccCCCCCchhH-hhheeeeEEEEec
Confidence 999999999999999999999999999999999999752 18999999999999999655 5599999988764
|
|
| >PRK03137 1-pyrroline-5-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-85 Score=778.88 Aligned_cols=463 Identities=29% Similarity=0.431 Sum_probs=431.2
Q ss_pred CccceEEcCEEecCCCCCeEEeecCC-CCCeEEEecCCCHHHHHHHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHHhH
Q 001665 200 NRVSNFIGGKFVDLRGSATIDVINPA-TQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDI 278 (1035)
Q Consensus 200 ~~~~~~I~G~~~~~~~~~~~~v~nP~-tGevi~~v~~~s~~dv~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~ 278 (1035)
..+++||||+|+.+ +..++++||+ ||+++++++.++.+++++++++|++||+.|+.++.++|.++|++++++|+++.
T Consensus 35 ~~~~~~i~g~~~~~--~~~~~~~~P~~t~~~i~~~~~a~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~ 112 (514)
T PRK03137 35 QDYPLIIGGERITT--EDKIVSINPANKSEVVGRVSKATKELAEKAMQAALEAFETWKKWSPEDRARILLRAAAIIRRRK 112 (514)
T ss_pred cccceeECCEEecC--CCeeEeECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCH
Confidence 45678999999975 4679999999 69999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhhc-CccccCCCCCCcceeeeccceeEEEECCCCcchhchHHH
Q 001665 279 DKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQI-GEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWM 357 (1035)
Q Consensus 279 e~La~~i~~etGk~~~eA~~EV~~a~~~l~~~~~~a~~~~-g~~~~~~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~ 357 (1035)
++|++++++|+||++.+++.|+..+++.++++++.+.... +.... ...+...+++++|+|||++|+|||||+.+++++
T Consensus 113 ~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~-~~~g~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 191 (514)
T PRK03137 113 HEFSAWLVKEAGKPWAEADADTAEAIDFLEYYARQMLKLADGKPVE-SRPGEHNRYFYIPLGVGVVISPWNFPFAIMAGM 191 (514)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc-CCCCceEEEEEecCcEEEEECCCccHHHHHHHH
Confidence 9999999999999999999999999999999888765543 22221 124556788999999999999999999999999
Q ss_pred HHHHHhcCCEEEEeCCCCChhHHHHHHHHHHHhCCCCCcEEEeecc-hhhHhhhhcCCCccEEEEeccchHHHHHHHHHH
Q 001665 358 FSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGT-NDVINHICDDEDIKAISFVASSTASVQMYARAA 436 (1035)
Q Consensus 358 l~~ALaaGNaVVlKPS~~ap~ta~~L~ell~eAGlP~gvv~vV~g~-~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa 436 (1035)
+++||++||+||+|||+.+|.++..|++++.++|+|+|+||+|+|+ .+.+..|+.|++|++|+||||+.+|+.|++.|+
T Consensus 192 i~~ALaaGN~VVlKPs~~tp~~a~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~aa 271 (514)
T PRK03137 192 TLAAIVAGNTVLLKPASDTPVIAAKFVEVLEEAGLPAGVVNFVPGSGSEVGDYLVDHPKTRFITFTGSREVGLRIYERAA 271 (514)
T ss_pred HHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCCCcEEEeecCchHHHHHHhcCCCcCEEEEECCcHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999985 577899999999999999999999999999998
Q ss_pred h------cCCceeecCCCcceEEEcCCCCHHHHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHhccccc
Q 001665 437 A------RGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNV 509 (1035)
Q Consensus 437 ~------~l~Pv~lElGGknp~IV~~dADld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~ 509 (1035)
+ +++|+++|+|||||+||++|||++.|++.|++++|.|+||.|+++++|||+++++ +|+++|+++++++++|+
T Consensus 272 ~~~~~~~~l~~v~lElgGk~~~iV~~daDl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~l~~g~ 351 (514)
T PRK03137 272 KVQPGQIWLKRVIAEMGGKDAIVVDEDADLDLAAESIVASAFGFSGQKCSACSRAIVHEDVYDEVLEKVVELTKELTVGN 351 (514)
T ss_pred cccccccccceEEecCCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCccCeEEEEeHHHHHHHHHHHHHHHHhCCCCC
Confidence 6 7899999999999999999999999999999999999999999999999999998 89999999999999999
Q ss_pred CCCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEe
Q 001665 510 GTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQ 589 (1035)
Q Consensus 510 p~d~~~~~Gpli~~~~~~rl~~~i~~av~~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~ 589 (1035)
|.++. ++||++++.+++++.++|++++++ +++++||.. ....|+|++||||.++++++++++||+||||++|++
T Consensus 352 p~~~~-~~Gpli~~~~~~~v~~~v~~a~~~-~~vl~Gg~~----~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~ 425 (514)
T PRK03137 352 PEDNA-YMGPVINQASFDKIMSYIEIGKEE-GRLVLGGEG----DDSKGYFIQPTIFADVDPKARIMQEEIFGPVVAFIK 425 (514)
T ss_pred CCCcc-CcCCCCCHHHHHHHHHHHHHHHhC-CEEEeCCCc----CCCCceEEeeEEEeCCCCCCHHHhCCCCCceEEEEe
Confidence 99988 999999999999999999999887 699999863 123689999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHhcCCCcEEEEEcCCHHHHHHHHhccceeEEEEcCCc-----C-CCCCCCCCCCCC-CcCcHHHHHhcc
Q 001665 590 ADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPV-----P-SSFSSINESGEF-NFCGKSGVQFYT 662 (1035)
Q Consensus 590 ~~d~eeAI~laN~~~~GLsasVfS~d~~~a~~~a~~l~sG~V~IN~~~-----~-~PfGG~g~SG~G-~~~G~~g~~~ft 662 (1035)
|+|++|||+++|+++|||++||||+|.+.++++++++++|+|+||+.. . +||||+|.||+| +.+|.+++++||
T Consensus 426 ~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~gg~~~l~~ft 505 (514)
T PRK03137 426 AKDFDHALEIANNTEYGLTGAVISNNREHLEKARREFHVGNLYFNRGCTGAIVGYHPFGGFNMSGTDSKAGGPDYLLLFL 505 (514)
T ss_pred cCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCCcccccCCcccCCHHHHHHhc
Confidence 999999999999999999999999999999999999999999999752 2 799999999999 689999999999
Q ss_pred eeeEEEEec
Q 001665 663 QIKTVAQQW 671 (1035)
Q Consensus 663 ~~k~v~~~~ 671 (1035)
+.|+|...|
T Consensus 506 ~~k~v~~~~ 514 (514)
T PRK03137 506 QAKTVSEMF 514 (514)
T ss_pred eEEEEEEeC
Confidence 999998754
|
|
| >TIGR01780 SSADH succinate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-85 Score=771.82 Aligned_cols=441 Identities=31% Similarity=0.493 Sum_probs=416.3
Q ss_pred eecCCCCCeEEEecCCCHHHHHHHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHH
Q 001665 221 VINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDV 300 (1035)
Q Consensus 221 v~nP~tGevi~~v~~~s~~dv~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e~La~~i~~etGk~~~eA~~EV 300 (1035)
++||+||+++++++.++.++++.++++|++||+.|+.++.++|.++|++++++|+++.++|+.++++|+||++.+++.|+
T Consensus 1 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev 80 (448)
T TIGR01780 1 VYNPATGEIIGTVPDQGVEEAEAAIRAAYEAFKTWKNTTAKERSSLLRKWYNLMMENKDDLARLITLENGKPLKEAKGEI 80 (448)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHH
Confidence 46999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhcCccccCCCCCCcceeeeccceeEEEECCCCcchhchHHHHHHHHhcCCEEEEeCCCCChhHH
Q 001665 301 LFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTS 380 (1035)
Q Consensus 301 ~~a~~~l~~~~~~a~~~~g~~~~~~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~ALaaGNaVVlKPS~~ap~ta 380 (1035)
..+++.+++++.......+...+....+...+.+++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++
T Consensus 81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~ 160 (448)
T TIGR01780 81 LYAASFLEWFAEEAKRVYGDTIPSPQSDKRLLVIKQPVGVCAAITPWNFPAAMITRKAGAALAAGCTVVVKPAEQTPLSA 160 (448)
T ss_pred HHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEeeeeEEEEEcCCChHHHHHHHHHHHHHHcCCeEeeECCccchHHH
Confidence 99999999988776655554333222344556789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCCcEEEeecc--hhhHhhhhcCCCccEEEEeccchHHHHHHHHHHhcCCceeecCCCcceEEEcCCC
Q 001665 381 MILAALAMEAGLPDGVLNIVHGT--NDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMPDA 458 (1035)
Q Consensus 381 ~~L~ell~eAGlP~gvv~vV~g~--~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~l~Pv~lElGGknp~IV~~dA 458 (1035)
..++++|.++|+|+|+||+|+|+ .+.+..|+.|+++++|+||||+.+|+.|++.|+.+++|+++|+|||||+||++||
T Consensus 161 ~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~~aa~~~~~~~lElGGk~~~iV~~da 240 (448)
T TIGR01780 161 LALARLAEQAGIPKGVLNVITGSRAKEVGKVLCTSPLVRKISFTGSTNVGKILMKQSASTVKKVSMELGGNAPFIVFDDA 240 (448)
T ss_pred HHHHHHHHHcCCCccceEEEeCCCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCceEeecCCCCeeEECCCC
Confidence 99999999999999999999986 4678999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHhcccccCCCCCCCcCCCcCHHHHHHHHHHHHHHH
Q 001665 459 SIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAV 537 (1035)
Q Consensus 459 Dld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d~~~~~Gpli~~~~~~rl~~~i~~av 537 (1035)
|++.|++.+++++|+|+||.|+++++|||+++++ +|+++|+++++++++|+|.++++++||++++.+++++.++|++++
T Consensus 241 dl~~aa~~iv~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~ 320 (448)
T TIGR01780 241 DIDQAVEGAMASKFRNAGQTCVCANRLYVHDGIYDEFAKKLAEAVKKLKVGNGLDEGVTQGPLINEKAVEKVEKHIADAV 320 (448)
T ss_pred CHHHHHHHHHHHHHHhcCCcccCCceeechHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999998 999999999999999999999999999999999999999999999
Q ss_pred HCCCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecCCHHHHHHHHHhcCCCcEEEEEcCCHH
Q 001665 538 DNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGL 617 (1035)
Q Consensus 538 ~~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI~laN~~~~GLsasVfS~d~~ 617 (1035)
++|+++++||... ...|+|++||||.+++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.+
T Consensus 321 ~~Ga~il~gg~~~----~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~~~vfs~d~~ 396 (448)
T TIGR01780 321 EKGAKVVTGGKRH----ELGGNFFEPTVLSNVTQDMLVAKEETFGPLAPVFKFDDEEEVIAIANDTEVGLAAYFFSRDLA 396 (448)
T ss_pred HCCCEEEeCCCcC----CCCCeeEcCEEEecCCCCChHhhCCCCCceEEEEEECCHHHHHHHHhCCCcCceEEEECCCHH
Confidence 9999999999641 235899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhccceeEEEEcCCcC----CCCCCCCCCCCCCcCcHHHHHhcceee
Q 001665 618 AARKFQNEIEARLVGINVPVP----SSFSSINESGEFNFCGKSGVQFYTQIK 665 (1035)
Q Consensus 618 ~a~~~a~~l~sG~V~IN~~~~----~PfGG~g~SG~G~~~G~~g~~~ft~~k 665 (1035)
.++++++++++|.|+||+... +||||+|.||+|+++|.+|+++|++.|
T Consensus 397 ~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~~~~~~~~k 448 (448)
T TIGR01780 397 TIWRVAEALEYGMVGINTGLISNVVAPFGGVKQSGLGREGSKYGIEEYLETK 448 (448)
T ss_pred HHHHHHHhCCccEEEECCCCCCCCCCCCCCcccccCCccchHHHHHHHhccC
Confidence 999999999999999998632 899999999999999999999999865
|
SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070). |
| >cd07123 ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-85 Score=778.47 Aligned_cols=464 Identities=23% Similarity=0.326 Sum_probs=427.7
Q ss_pred CccceEEcCEEecCCCCCeEEeecCCC-CCeEEEecCCCHHHHHHHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHH-h
Q 001665 200 NRVSNFIGGKFVDLRGSATIDVINPAT-QEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRR-D 277 (1035)
Q Consensus 200 ~~~~~~I~G~~~~~~~~~~~~v~nP~t-Gevi~~v~~~s~~dv~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~-~ 277 (1035)
..+++||||+|+.+ +..++++||+| |+++++++.++.+|+++||++|++||+.|+.++.++|.++|++++++|++ +
T Consensus 31 ~~~~~~i~G~~~~~--~~~~~v~~P~~tg~~l~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~ 108 (522)
T cd07123 31 VEIPLVIGGKEVRT--GNTGKQVMPHDHAHVLATYHYADAALVEKAIEAALEARKEWARMPFEDRAAIFLKAADLLSGKY 108 (522)
T ss_pred cccCeeECCEEcCC--CCeEEEECCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhC
Confidence 35678999999874 46899999995 99999999999999999999999999999999999999999999999996 7
Q ss_pred HHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHhhcCccccCCCCCCcceeeeccc-eeEEEECCCCcchhchH
Q 001665 278 IDKLAMNITVEQGTTLKAAQR-DVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPL-GVCAGICPFNFPDMTPL 355 (1035)
Q Consensus 278 ~e~La~~i~~etGk~~~eA~~-EV~~a~~~l~~~~~~a~~~~g~~~~~~~~g~~~~~~~ePl-GVV~iI~P~N~Pl~~~~ 355 (1035)
+++|+.++++|+||++.+++. |+..+++.+++++..+....+........+...+++++|+ |||++|+|||||+.+..
T Consensus 109 ~~ela~~~~~e~Gk~~~~a~~~~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwNfP~~~~~ 188 (522)
T cd07123 109 RYELNAATMLGQGKNVWQAEIDAACELIDFLRFNVKYAEELYAQQPLSSPAGVWNRLEYRPLEGFVYAVSPFNFTAIGGN 188 (522)
T ss_pred HHHHHHHHHHhcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecCCceEEEECCcccHHHHHH
Confidence 999999999999999999865 7888999999988876655443222222244567899998 99999999999999999
Q ss_pred HHHHHHHhcCCEEEEeCCCCChhHHHHHHHHHHHhCCCCCcEEEeecch-hhHhhhhcCCCccEEEEeccchHHHHHHHH
Q 001665 356 WMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGTN-DVINHICDDEDIKAISFVASSTASVQMYAR 434 (1035)
Q Consensus 356 ~~l~~ALaaGNaVVlKPS~~ap~ta~~L~ell~eAGlP~gvv~vV~g~~-e~~~~L~~h~~vd~V~fTGS~~vG~~I~~a 434 (1035)
+++++|| +||+||+|||+.+|+++..|+++|.++|+|+|+||+|+|+. +.+..|+.|++|++|+||||+.+|+.|+++
T Consensus 189 ~~~~pal-aGN~VVlKPs~~tp~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~V~FTGS~~~G~~i~~~ 267 (522)
T cd07123 189 LAGAPAL-MGNVVLWKPSDTAVLSNYLVYKILEEAGLPPGVINFVPGDGPVVGDTVLASPHLAGLHFTGSTPTFKSLWKQ 267 (522)
T ss_pred HHHHHHH-hCCEEEEECCCCCCHHHHHHHHHHHHcCcCCCcEEEEecCchHHHHHHhcCCCcCEEEEECCHHHHHHHHHH
Confidence 9999999 69999999999999999999999999999999999999965 578999999999999999999999999999
Q ss_pred HHhcCC------ceeecCCCcceEEEcCCCCHHHHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHhccc
Q 001665 435 AAARGK------RVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKV 507 (1035)
Q Consensus 435 Aa~~l~------Pv~lElGGknp~IV~~dADld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkv 507 (1035)
|+++++ |+++|||||||+||++|||++.|++.|++++|.|+||.|+++++|||+++++ +|+++|+++++++++
T Consensus 268 aa~~l~~~~~~~~v~lElGGkn~~IV~~dAdl~~Aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~ 347 (522)
T cd07123 268 IGENLDRYRTYPRIVGETGGKNFHLVHPSADVDSLVTATVRGAFEYQGQKCSAASRAYVPESLWPEVKERLLEELKEIKM 347 (522)
T ss_pred HHhhcccccccCCEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHhhCcc
Confidence 999987 8999999999999999999999999999999999999999999999999998 999999999999999
Q ss_pred ccCCCCCCCcCCCcCHHHHHHHHHHHHHHHHC-CCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCccee
Q 001665 508 NVGTDASADVGPVVSVEVKDQISRLIQNAVDN-GASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLL 586 (1035)
Q Consensus 508 G~p~d~~~~~Gpli~~~~~~rl~~~i~~av~~-GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~ 586 (1035)
|+|.++++++|||+++.+++++.++|++++++ ||++++||.. ....|+|++||||.+++++|.+++||+||||++
T Consensus 348 G~p~d~~t~~Gpli~~~~~~~v~~~v~~a~~~~Ga~vl~gg~~----~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~ 423 (522)
T cd07123 348 GDPDDFSNFMGAVIDEKAFDRIKGYIDHAKSDPEAEIIAGGKC----DDSVGYFVEPTVIETTDPKHKLMTEEIFGPVLT 423 (522)
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEeCCCc----CCCCCceEcCEEEeCCCCCChhhhcCCCCCeEE
Confidence 99999999999999999999999999999999 9999999863 123589999999999999999999999999999
Q ss_pred EEecC--CHHHHHHHHHhcC-CCcEEEEEcCCHHHHHHHHhcc--ceeEEEEcCCc------CCCCCCCCCCCCC-CcCc
Q 001665 587 NMQAD--SLEEAIKMVNRNR-FVNGASIFTSSGLAARKFQNEI--EARLVGINVPV------PSSFSSINESGEF-NFCG 654 (1035)
Q Consensus 587 V~~~~--d~eeAI~laN~~~-~GLsasVfS~d~~~a~~~a~~l--~sG~V~IN~~~------~~PfGG~g~SG~G-~~~G 654 (1035)
|++|+ |++|||+++|++. |||++||||+|.+.+.++++++ ++|.|+||+.. .+||||+|.||+| +++|
T Consensus 424 V~~~~~~~~~eai~~aN~~~~~gL~a~Vft~d~~~~~~~~~~l~~~~G~v~iN~~~~~~~~~~~PfGG~k~SG~gg~~~g 503 (522)
T cd07123 424 VYVYPDSDFEETLELVDTTSPYALTGAIFAQDRKAIREATDALRNAAGNFYINDKPTGAVVGQQPFGGARASGTNDKAGS 503 (522)
T ss_pred EEEeCCCCHHHHHHHHhCCCCcCceEEEEeCCHHHHHHHHHhhhhcCcEEEECCCCCCCCCCCCCCCcchhcCCCcccCC
Confidence 99998 4799999999984 9999999999999999999996 59999999752 2799999999996 9999
Q ss_pred HHHHHhcceeeEEEEe
Q 001665 655 KSGVQFYTQIKTVAQQ 670 (1035)
Q Consensus 655 ~~g~~~ft~~k~v~~~ 670 (1035)
.+++++|++.|++++.
T Consensus 504 ~~~l~~~~~~k~~~~~ 519 (522)
T cd07123 504 PLNLLRWVSPRTIKET 519 (522)
T ss_pred HHHHHHhcceEEEEEe
Confidence 9999999999998764
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences. |
| >PLN02174 aldehyde dehydrogenase family 3 member H1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-85 Score=768.62 Aligned_cols=426 Identities=20% Similarity=0.247 Sum_probs=396.0
Q ss_pred CCHHHHHHHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHH
Q 001665 236 TTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQR-DVLFGLEVVEQACAVA 314 (1035)
Q Consensus 236 ~s~~dv~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e~La~~i~~etGk~~~eA~~-EV~~a~~~l~~~~~~a 314 (1035)
-...|+++++++|++||+.|+.++.++|.++|++++++|+++.++|+++++.|+||+..++.. |+..+++.++++++.+
T Consensus 7 ~~~~~v~~av~~a~~af~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~l~~e~GKp~~~a~~~Ev~~~~~~~~~~~~~~ 86 (484)
T PLN02174 7 FGAADASILVTELRRSFDDGVTRGYEWRVTQLKKLMIICDNHEPEIVAALRDDLGKPELESSVYEVSLLRNSIKLALKQL 86 (484)
T ss_pred cCHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 467899999999999999999999999999999999999999999999999999999999975 9999999999999876
Q ss_pred HhhcCccc---cCCCCCCcceeeeccceeEEEECCCCcchhchHHHHHHHHhcCCEEEEeCCCCChhHHHHHHHHHHHhC
Q 001665 315 TLQIGEFV---PNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAG 391 (1035)
Q Consensus 315 ~~~~g~~~---~~~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~ALaaGNaVVlKPS~~ap~ta~~L~ell~eAG 391 (1035)
....+... .....+...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++.+|++++.+ |
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPse~tp~~~~~l~~l~~~-~ 165 (484)
T PLN02174 87 KNWMAPEKAKTSLTTFPASAEIVSEPLGVVLVISAWNYPFLLSIDPVIGAISAGNAVVLKPSELAPASSALLAKLLEQ-Y 165 (484)
T ss_pred HHHhcccccccccccCCcceEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHH-h
Confidence 64433111 1111233467899999999999999999999999999999999999999999999999999999999 6
Q ss_pred CCCCcEEEeecchhhHhhhhcCCCccEEEEeccchHHHHHHHHHHhcCCceeecCCCcceEEEcCCCCHHHHHHHHHHHH
Q 001665 392 LPDGVLNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAG 471 (1035)
Q Consensus 392 lP~gvv~vV~g~~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~l~Pv~lElGGknp~IV~~dADld~Aa~~Iv~s~ 471 (1035)
+|+|+||+|+|+.+.+..|+. +++|+|+||||+.+|+.|+++|+++++|+++|||||||+||++|||++.|++.+++++
T Consensus 166 lp~gvv~vv~G~~~~~~~l~~-~~vd~V~FTGS~~~G~~I~~~aa~~l~~v~LELGGk~p~iV~~dADl~~Aa~~i~~g~ 244 (484)
T PLN02174 166 LDSSAVRVVEGAVTETTALLE-QKWDKIFYTGSSKIGRVIMAAAAKHLTPVVLELGGKSPVVVDSDTDLKVTVRRIIAGK 244 (484)
T ss_pred CCCCEEEEEECChHHHHHHhc-ccCCEEEEECChHHHHHHHHHHHhcCCcEEEecCCCCeEEEcCCCCHHHHHHHHHHHH
Confidence 999999999997777888886 8999999999999999999999999999999999999999999999999999999999
Q ss_pred h-ccCCCCccCCceEEEeCccH-HHHHHHHHHHHhcccccCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCcEeeCCcc
Q 001665 472 F-GAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRN 549 (1035)
Q Consensus 472 f-~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d~~~~~Gpli~~~~~~rl~~~i~~av~~GAkvl~gG~~ 549 (1035)
| .|+||.|+++++|||+++++ +|+++|+++++++++|+|.+ ++++||++++.+++++.++|+++ .+|+++++||..
T Consensus 245 f~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~-~~~~Gpli~~~~~~~v~~~i~~a-~~ga~~~~GG~~ 322 (484)
T PLN02174 245 WGCNNGQACISPDYILTTKEYAPKVIDAMKKELETFYGKNPME-SKDMSRIVNSTHFDRLSKLLDEK-EVSDKIVYGGEK 322 (484)
T ss_pred hhCCCCCCCCcCcEEEEeHHHHHHHHHHHHHHHHhhcCCCCcc-cCCcCCCCCHHHHHHHHHHHHHH-HcCCEEEECCCc
Confidence 9 69999999999999999998 99999999999999999987 78999999999999999999998 789999999863
Q ss_pred cccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecCCHHHHHHHHHhcCCCcEEEEEcCCHHHHHHHHhcccee
Q 001665 550 IVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEAR 629 (1035)
Q Consensus 550 ~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI~laN~~~~GLsasVfS~d~~~a~~~a~~l~sG 629 (1035)
+..|+|++|||+.+++++|.+++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|
T Consensus 323 -----~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eai~~aN~~~~gLaa~vft~d~~~a~~~~~~l~aG 397 (484)
T PLN02174 323 -----DRENLKIAPTILLDVPLDSLIMSEEIFGPLLPILTLNNLEESFDVIRSRPKPLAAYLFTHNKKLKERFAATVSAG 397 (484)
T ss_pred -----CCCCCEEEEEEEecCCCCChhhcCCcCCCeEEEecCCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHcCCcc
Confidence 235899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCc-----C-CCCCCCCCCCCCCcCcHHHHHhcceeeEEEEe
Q 001665 630 LVGINVPV-----P-SSFSSINESGEFNFCGKSGVQFYTQIKTVAQQ 670 (1035)
Q Consensus 630 ~V~IN~~~-----~-~PfGG~g~SG~G~~~G~~g~~~ft~~k~v~~~ 670 (1035)
.|+||+.. + +||||+|.||+|+++|.+|+++||+.|+|+.+
T Consensus 398 ~v~IN~~~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~ 444 (484)
T PLN02174 398 GIVVNDIAVHLALHTLPFGGVGESGMGAYHGKFSFDAFSHKKAVLYR 444 (484)
T ss_pred eEEECCCcCCCCCCCCCCCCcCccccCccchHHHHHHhcceEEEEEC
Confidence 99999752 2 79999999999999999999999999999875
|
|
| >cd07107 ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-85 Score=768.45 Aligned_cols=447 Identities=32% Similarity=0.430 Sum_probs=420.2
Q ss_pred eecCCCCCeEEEecCCCHHHHHHHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHH
Q 001665 221 VINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDV 300 (1035)
Q Consensus 221 v~nP~tGevi~~v~~~s~~dv~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e~La~~i~~etGk~~~eA~~EV 300 (1035)
++||+||+++++++.++.+|++++++.|++||+.|+.++.++|.++|++++++|+++.++|++++++|+||+..++..|+
T Consensus 1 ~~~p~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ev 80 (456)
T cd07107 1 VINPATGQVLARVPAASAADVDRAVAAARAAFPEWRATTPLERARMLRELATRLREHAEELALIDALDCGNPVSAMLGDV 80 (456)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhcCccccCCCCCCcceeeeccceeEEEECCCCcchhchHHHHHHHHhcCCEEEEeCCCCChhHH
Q 001665 301 LFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTS 380 (1035)
Q Consensus 301 ~~a~~~l~~~~~~a~~~~g~~~~~~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~ALaaGNaVVlKPS~~ap~ta 380 (1035)
..+++.++++++...+..+...+.. .+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++
T Consensus 81 ~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~ 159 (456)
T cd07107 81 MVAAALLDYFAGLVTELKGETIPVG-GRNLHYTLREPYGVVARIVAFNHPLMFAAAKIAAPLAAGNTVVVKPPEQAPLSA 159 (456)
T ss_pred HHHHHHHHHHHHHHHHhCCccccCC-CCceEEEEEecceEEEEECCcccHHHHHHHHHhHHHHcCCEEEEeCCCCChHHH
Confidence 9999999999887766665543322 244567889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCCcEEEeecch-hhHhhhhcCCCccEEEEeccchHHHHHHHHHHhcCCceeecCCCcceEEEcCCCC
Q 001665 381 MILAALAMEAGLPDGVLNIVHGTN-DVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMPDAS 459 (1035)
Q Consensus 381 ~~L~ell~eAGlP~gvv~vV~g~~-e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~l~Pv~lElGGknp~IV~~dAD 459 (1035)
..+++++.++ +|+|+||+|+|+. +.+..|+.|+++++|+||||+.+|+.|+++++++++|+++|+|||||+||++|||
T Consensus 160 ~~l~~~~~~~-lP~gvv~~v~g~~~~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa~~~~~~~lElgG~~p~iV~~dad 238 (456)
T cd07107 160 LRLAELAREV-LPPGVFNILPGDGATAGAALVRHPDVKRIALIGSVPTGRAIMRAAAEGIKHVTLELGGKNALIVFPDAD 238 (456)
T ss_pred HHHHHHHHHh-CCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhcCCCeEEEECCCCCeEEECCCCC
Confidence 9999999995 9999999999865 5789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHH-hccCCCCccCCceEEEeCccH-HHHHHHHHHHHhcccccCCCCCCCcCCCcCHHHHHHHHHHHHHHH
Q 001665 460 IDATLNALVSAG-FGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAV 537 (1035)
Q Consensus 460 ld~Aa~~Iv~s~-f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d~~~~~Gpli~~~~~~rl~~~i~~av 537 (1035)
++.|++.|++++ |.++||.|+++++|||+++++ +|+++|+++++++++|+|.++++++||++++.+++++.++|++++
T Consensus 239 l~~Aa~~i~~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~ 318 (456)
T cd07107 239 PEAAADAAVAGMNFTWCGQSCGSTSRLFVHESIYDEVLARVVERVAAIKVGDPTDPATTMGPLVSRQQYDRVMHYIDSAK 318 (456)
T ss_pred HHHHHHHHHHhchhhcCCCCCcCCcEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCcccCHHHHHHHHHHHHHHH
Confidence 999999999995 899999999999999999998 999999999999999999999999999999999999999999999
Q ss_pred HCCCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecCCHHHHHHHHHhcCCCcEEEEEcCCHH
Q 001665 538 DNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGL 617 (1035)
Q Consensus 538 ~~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI~laN~~~~GLsasVfS~d~~ 617 (1035)
++|+++++||.....+....|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+
T Consensus 319 ~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~ 398 (456)
T cd07107 319 REGARLVTGGGRPEGPALEGGFYVEPTVFADVTPGMRIAREEIFGPVLSVLRWRDEAEMVAQANGVEYGLTAAIWTNDIS 398 (456)
T ss_pred HCCCEEEeCCCccccccCCCCceECCEEEECCCCCChhhhCCCCCceEEEEeeCCHHHHHHHHhCCCCcceEEEECCCHH
Confidence 99999999997532222346899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhccceeEEEEcCCcC----CCCCCCCCCCCCCcCcHHHHHhcceeeEEEE
Q 001665 618 AARKFQNEIEARLVGINVPVP----SSFSSINESGEFNFCGKSGVQFYTQIKTVAQ 669 (1035)
Q Consensus 618 ~a~~~a~~l~sG~V~IN~~~~----~PfGG~g~SG~G~~~G~~g~~~ft~~k~v~~ 669 (1035)
++++++.++++|.|+||+... +||||+|.||+|+++|++|+++||+.|++.+
T Consensus 399 ~~~~~~~~l~~G~v~iN~~~~~~~~~pfgG~k~SG~G~~~g~~~~~~~~~~k~v~~ 454 (456)
T cd07107 399 QAHRTARRVEAGYVWINGSSRHFLGAPFGGVKNSGIGREECLEELLSYTQEKNVNV 454 (456)
T ss_pred HHHHHHHhcCcCEEEECCCCCCCCCCCcCCcccccCCcCchHHHHHHhhceEEEEE
Confidence 999999999999999998642 8999999999999999999999999999875
|
Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. |
| >PLN00412 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-84 Score=771.46 Aligned_cols=460 Identities=24% Similarity=0.388 Sum_probs=426.8
Q ss_pred CccceEEcCEEecCCCCCeEEeecCCCCCeEEEecCCCHHHHHHHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHHhHH
Q 001665 200 NRVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDID 279 (1035)
Q Consensus 200 ~~~~~~I~G~~~~~~~~~~~~v~nP~tGevi~~v~~~s~~dv~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e 279 (1035)
..+++||||+|+.+.++..++++||+||+++++++.++.+|++++++.|++||+.|+.++.++|.++|+++++.|+++++
T Consensus 14 ~~~~~~i~G~~~~~~~~~~~~~~~P~t~~~i~~~~~a~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~ 93 (496)
T PLN00412 14 DVYKYYADGEWRTSSSGKSVAITNPSTRKTQYKVQACTQEEVNKAMESAKAAQKAWAKTPLWKRAELLHKAAAILKEHKA 93 (496)
T ss_pred cccCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHH
Confidence 45678999999976566789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCc--cccC-CCC----CCcceeeeccceeEEEECCCCcchh
Q 001665 280 KLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGE--FVPN-ALC----GLDTYCFREPLGVCAGICPFNFPDM 352 (1035)
Q Consensus 280 ~La~~i~~etGk~~~eA~~EV~~a~~~l~~~~~~a~~~~g~--~~~~-~~~----g~~~~~~~ePlGVV~iI~P~N~Pl~ 352 (1035)
+|++++++|+||++.++..|+..+++.+++++..+....+. .... ..+ +...+++++|+|||++|+|||||+.
T Consensus 94 el~~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~ 173 (496)
T PLN00412 94 PIAECLVKEIAKPAKDAVTEVVRSGDLISYTAEEGVRILGEGKFLVSDSFPGNERNKYCLTSKIPLGVVLAIPPFNYPVN 173 (496)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCccCCceeEEEEecceEEEEECCCCchHH
Confidence 99999999999999999999999999999988765443221 1111 011 1234678999999999999999999
Q ss_pred chHHHHHHHHhcCCEEEEeCCCCChhHHHHHHHHHHHhCCCCCcEEEeecc-hhhHhhhhcCCCccEEEEeccchHHHHH
Q 001665 353 TPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGT-NDVINHICDDEDIKAISFVASSTASVQM 431 (1035)
Q Consensus 353 ~~~~~l~~ALaaGNaVVlKPS~~ap~ta~~L~ell~eAGlP~gvv~vV~g~-~e~~~~L~~h~~vd~V~fTGS~~vG~~I 431 (1035)
++++++++||++||+||+|||+.+|.++..|++++.++|+|+|++|+|+|+ .+.+..|+.|++|++|+|||| .+|+.|
T Consensus 174 ~~~~~i~~ALaaGN~VIlKPs~~t~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs-~~g~~v 252 (496)
T PLN00412 174 LAVSKIAPALIAGNAVVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPGVNCISFTGG-DTGIAI 252 (496)
T ss_pred HHHHHHHHHHHcCCEEEEECCccCcHHHHHHHHHHHHhCCCcccEEEEecCchHHHHHHhcCCCcCEEEEeCh-HHHHHH
Confidence 999999999999999999999999999999999999999999999999985 478889999999999999999 999999
Q ss_pred HHHHHhcCCceeecCCCcceEEEcCCCCHHHHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHhcccccC
Q 001665 432 YARAAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVG 510 (1035)
Q Consensus 432 ~~aAa~~l~Pv~lElGGknp~IV~~dADld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p 510 (1035)
++.++ ++|+++|+|||||+||++|||++.|++.+++++|+|+||.|+++++||||++++ +|+++|+++++++++|+|
T Consensus 253 ~~~a~--~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p 330 (496)
T PLN00412 253 SKKAG--MVPLQMELGGKDACIVLEDADLDLAAANIIKGGFSYSGQRCTAVKVVLVMESVADALVEKVNAKVAKLTVGPP 330 (496)
T ss_pred HHHhC--CCcEEEEcCCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCeEEEEcHHHHHHHHHHHHHHHHhCccCCC
Confidence 98875 899999999999999999999999999999999999999999999999999998 899999999999999999
Q ss_pred CCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEec
Q 001665 511 TDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQA 590 (1035)
Q Consensus 511 ~d~~~~~Gpli~~~~~~rl~~~i~~av~~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~ 590 (1035)
.+ ++++||++++.+++++.++|++++.+|++++++|. ..|.|++||||.++++++++++||+||||++|++|
T Consensus 331 ~~-~~~~gp~i~~~~~~~v~~~i~~a~~~Ga~~l~~~~-------~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~ 402 (496)
T PLN00412 331 ED-DCDITPVVSESSANFIEGLVMDAKEKGATFCQEWK-------REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRI 402 (496)
T ss_pred cc-cCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEecCC-------CCCeEEecEEEeCCCCCCHHHhCcCCCCeEEEEEe
Confidence 77 78999999999999999999999999999998764 25899999999999999999999999999999999
Q ss_pred CCHHHHHHHHHhcCCCcEEEEEcCCHHHHHHHHhccceeEEEEcCCc-----CCCCCCCCCCCCCCcCcHHHHHhcceee
Q 001665 591 DSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPV-----PSSFSSINESGEFNFCGKSGVQFYTQIK 665 (1035)
Q Consensus 591 ~d~eeAI~laN~~~~GLsasVfS~d~~~a~~~a~~l~sG~V~IN~~~-----~~PfGG~g~SG~G~~~G~~g~~~ft~~k 665 (1035)
+|+||||+++|+++|||++||||+|.+++.++++++++|.|+||++. .+||||+|.||+|+++|++|+++||+.|
T Consensus 403 ~~~deai~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k 482 (496)
T PLN00412 403 NSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPARGPDHFPFQGLKDSGIGSQGITNSINMMTKVK 482 (496)
T ss_pred CCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCCCccccccCCCChHHHHHHhcceE
Confidence 99999999999999999999999999999999999999999999863 1899999999999999999999999999
Q ss_pred EEEEe
Q 001665 666 TVAQQ 670 (1035)
Q Consensus 666 ~v~~~ 670 (1035)
+++..
T Consensus 483 ~i~~~ 487 (496)
T PLN00412 483 STVIN 487 (496)
T ss_pred EEEEe
Confidence 99865
|
|
| >cd07083 ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-84 Score=772.15 Aligned_cols=468 Identities=26% Similarity=0.401 Sum_probs=435.1
Q ss_pred CCCCCccceEEcCEEecCCCCCeEEeecCC-CCCeEEEecCCCHHHHHHHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHH
Q 001665 196 NIDNNRVSNFIGGKFVDLRGSATIDVINPA-TQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELI 274 (1035)
Q Consensus 196 ~~~~~~~~~~I~G~~~~~~~~~~~~v~nP~-tGevi~~v~~~s~~dv~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L 274 (1035)
..++..+++||+|+|+.+ +..++++||+ ||+++++++.++.+|++++|++|++||+.|+.++.++|.++|++++++|
T Consensus 13 ~~~~~~~~~~i~g~~~~~--~~~~~~~~P~~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l 90 (500)
T cd07083 13 EEFGRAYPLVIGGEWVDT--KERMVSVSPFAPSEVVGTTAKADKAEAEAALEAAWAAFKTWKDWPQEDRARLLLKAADLL 90 (500)
T ss_pred hhccccccceECCEEecC--CCceEeeCCCCCCcEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Confidence 345678889999999975 4579999997 6999999999999999999999999999999999999999999999999
Q ss_pred HHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCcccc-CCCCCCcceeeeccceeEEEECCCCcchhc
Q 001665 275 RRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVP-NALCGLDTYCFREPLGVCAGICPFNFPDMT 353 (1035)
Q Consensus 275 ~~~~e~La~~i~~etGk~~~eA~~EV~~a~~~l~~~~~~a~~~~g~~~~-~~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~ 353 (1035)
+++.++|+++++.|+||++.++..|+..+++.++++++.+....+.... ....+...+++++|+|||++|+|||||+.+
T Consensus 91 ~~~~~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~ 170 (500)
T cd07083 91 RRRRRELIATLTYEVGKNWVEAIDDVAEAIDFIRYYARAALRLRYPAVEVVPYPGEDNESFYVGLGAGVVISPWNFPVAI 170 (500)
T ss_pred HhCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCCceEEEEEeccceEEEEcCCccHHHH
Confidence 9999999999999999999999999999999999999877655443211 112345677889999999999999999999
Q ss_pred hHHHHHHHHhcCCEEEEeCCCCChhHHHHHHHHHHHhCCCCCcEEEeecc-hhhHhhhhcCCCccEEEEeccchHHHHHH
Q 001665 354 PLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGT-NDVINHICDDEDIKAISFVASSTASVQMY 432 (1035)
Q Consensus 354 ~~~~l~~ALaaGNaVVlKPS~~ap~ta~~L~ell~eAGlP~gvv~vV~g~-~e~~~~L~~h~~vd~V~fTGS~~vG~~I~ 432 (1035)
.++++++||++||+||+|||+.+|.++.+|+++|.++|+|+|+||+|+|+ .+.+..|+.|++||+|+||||+.+|+.|+
T Consensus 171 ~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~eaGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~v~ 250 (500)
T cd07083 171 FTGMIVAPVAVGNTVIAKPAEDAVVVGYKVFEIFHEAGFPPGVVQFLPGVGEEVGAYLTEHERIRGINFTGSLETGKKIY 250 (500)
T ss_pred HHHHHHHHHHcCCeEEEeCCCcchHHHHHHHHHHHHcCCCCCceEEEeCCCchhHHHHhcCCCcCEEEEECcHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999994 57889999999999999999999999999
Q ss_pred HHHHhcC------CceeecCCCcceEEEcCCCCHHHHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHhc
Q 001665 433 ARAAARG------KRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKAL 505 (1035)
Q Consensus 433 ~aAa~~l------~Pv~lElGGknp~IV~~dADld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~l 505 (1035)
+.+++++ +|+++|+|||||+||++|||++.|++.|++++|.|+||.|+++++|||+++++ +|+++|+++++++
T Consensus 251 ~~aa~~~~~~~~~~~v~lElgG~~~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~ 330 (500)
T cd07083 251 EAAARLAPGQTWFKRLYVETGGKNAIIVDETADFELVVEGVVVSAFGFQGQKCSAASRLILTQGAYEPVLERLLKRAERL 330 (500)
T ss_pred HHHhhccccccccCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHcC
Confidence 9999886 99999999999999999999999999999999999999999999999999988 9999999999999
Q ss_pred ccccCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcce
Q 001665 506 KVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVL 585 (1035)
Q Consensus 506 kvG~p~d~~~~~Gpli~~~~~~rl~~~i~~av~~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL 585 (1035)
++|+|.++++++||++++.+++++.++|++++++| ++++||... ...|+|++||||.++++++.+++||+||||+
T Consensus 331 ~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~g-~vl~gg~~~----~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl 405 (500)
T cd07083 331 SVGPPEENGTDLGPVIDAEQEAKVLSYIEHGKNEG-QLVLGGKRL----EGEGYFVAPTVVEEVPPKARIAQEEIFGPVL 405 (500)
T ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCC-EEEeCCCcC----CCCCeEEccEEEeCCCCCChHhhCCCCCceE
Confidence 99999999999999999999999999999999887 899998642 2358999999999999999999999999999
Q ss_pred eEEecC--CHHHHHHHHHhcCCCcEEEEEcCCHHHHHHHHhccceeEEEEcCCc-----C-CCCCCCCCCCCC-CcCcHH
Q 001665 586 LNMQAD--SLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPV-----P-SSFSSINESGEF-NFCGKS 656 (1035)
Q Consensus 586 ~V~~~~--d~eeAI~laN~~~~GLsasVfS~d~~~a~~~a~~l~sG~V~IN~~~-----~-~PfGG~g~SG~G-~~~G~~ 656 (1035)
+|++|+ |++|||+++|+++|||+++|||+|.+.+.++++++++|+|+||+.. . +||||+|.||+| +.+|.+
T Consensus 406 ~v~~~~d~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~ 485 (500)
T cd07083 406 SVIRYKDDDFAEALEVANSTPYGLTGGVYSRKREHLEEARREFHVGNLYINRKITGALVGVQPFGGFKLSGTNAKTGGPH 485 (500)
T ss_pred EEEEeCCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCCccccccCCCcccCHH
Confidence 999999 9999999999999999999999999999999999999999999762 2 799999999999 578999
Q ss_pred HHHhcceeeEEEEe
Q 001665 657 GVQFYTQIKTVAQQ 670 (1035)
Q Consensus 657 g~~~ft~~k~v~~~ 670 (1035)
++++|++.|++..+
T Consensus 486 ~l~~~~~~k~~~~~ 499 (500)
T cd07083 486 YLRRFLEMKAVAER 499 (500)
T ss_pred HHHHhhheeEEEEc
Confidence 99999999998753
|
ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. |
| >TIGR03250 PhnAcAld_DH putative phosphonoacetaldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-84 Score=765.41 Aligned_cols=455 Identities=25% Similarity=0.366 Sum_probs=422.8
Q ss_pred ceEEcCEEecCCCCCeEEeecCCCCCeEEEecCCCHHHHHHHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHHhHHHHH
Q 001665 203 SNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLA 282 (1035)
Q Consensus 203 ~~~I~G~~~~~~~~~~~~v~nP~tGevi~~v~~~s~~dv~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e~La 282 (1035)
++||||+|+.+ +..++++||+||+++++++.++.+|+++|+++|++|+ ..++..+|.++|++++++|+++.++|+
T Consensus 5 ~~~i~g~~~~~--~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~---~~~~~~~R~~~l~~~a~~l~~~~~ela 79 (472)
T TIGR03250 5 ALRIAGEKVSR--DRVIEVRYPYNGTVVGTVPKASVDDVRRAFAIAAAYR---PTLTRYERSAILDRAAALLAARKEEIS 79 (472)
T ss_pred CceECCEEecC--CCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHH---hhCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 57999999863 5689999999999999999999999999999999876 578999999999999999999999999
Q ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCccccC----CCCCCcceeeeccc-eeEEEECCCCcchhchHHH
Q 001665 283 MNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVPN----ALCGLDTYCFREPL-GVCAGICPFNFPDMTPLWM 357 (1035)
Q Consensus 283 ~~i~~etGk~~~eA~~EV~~a~~~l~~~~~~a~~~~g~~~~~----~~~g~~~~~~~ePl-GVV~iI~P~N~Pl~~~~~~ 357 (1035)
+++++|+||++.+++.|+..+++.+++++..+....+..... ...+...+++++|+ |||++|+|||||+.+++++
T Consensus 80 ~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~Gvv~~I~P~N~P~~~~~~~ 159 (472)
T TIGR03250 80 DLITLESGLSKKDSLYEVGRVADVLTFAAAEALRDDGQIFSCDLTPHGKARKVFTQREPLLGVISAITPFNHPMNQVAHK 159 (472)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccCCCCCCceEEEEEcCCCCEEEEEcCCcHHHHHHHHH
Confidence 999999999999999999999999999988776554432211 11233457889998 9999999999999999999
Q ss_pred HHHHHhcCCEEEEeCCCCChhHHHHHHHHHHHhCCCCCcEEEeecc-hhhHhhhhcCCCccEEEEeccchHHHHHHHHHH
Q 001665 358 FSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGT-NDVINHICDDEDIKAISFVASSTASVQMYARAA 436 (1035)
Q Consensus 358 l~~ALaaGNaVVlKPS~~ap~ta~~L~ell~eAGlP~gvv~vV~g~-~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa 436 (1035)
+++||++||+||+|||+.+|.++..++++|.++|+|+|+||+|+|+ .+.+..|+.|+++++|+||||+.+|+.|++.++
T Consensus 160 ~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~ 239 (472)
T TIGR03250 160 IAPAIATNNRMVVKPSEKTPLSALYLADILYEAGLPPQMLQVVTGDPREIADELITNPHVDLVTFTGGVAIGKYIAARAG 239 (472)
T ss_pred HHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCCCcccEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999985 578899999999999999999999999998875
Q ss_pred hcCCceeecCCCcceEEEcCCCCHHHHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHhcccccCCCCCC
Q 001665 437 ARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDASA 515 (1035)
Q Consensus 437 ~~l~Pv~lElGGknp~IV~~dADld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d~~~ 515 (1035)
++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++|||+++++ +|+++|+++++++++|+|.++++
T Consensus 240 --~~~~~lElGGk~p~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 317 (472)
T TIGR03250 240 --YRRQVLELGGNDPLIVMEDADLDRAADLAVKGSYKNSGQRCTAVKRMLVQESVADRFTELLVEKTRAWRYGDPMDPSV 317 (472)
T ss_pred --CCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhhCCCCCCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCCCCC
Confidence 789999999999999999999999999999999999999999999999999998 99999999999999999999999
Q ss_pred CcCCCcCHHHHHHHHHHHHHHHHCCCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecCCHHH
Q 001665 516 DVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEE 595 (1035)
Q Consensus 516 ~~Gpli~~~~~~rl~~~i~~av~~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~ee 595 (1035)
++||++++.+++++.+++++++++||++++||.. .|+|++||||.+++++|.+++||+||||++|++|+|++|
T Consensus 318 ~~gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~-------~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~e 390 (472)
T TIGR03250 318 DMGTVIDEAAAILFEARVNEAIAQGARLLLGNVR-------DGALYAPTVLDRVDPSMTLVREETFGPVSPVIRFCDIDD 390 (472)
T ss_pred cCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCc-------CCEEEcCEEEeCCCCCChHHhCCCcCCeEEEEEeCCHHH
Confidence 9999999999999999999999999999999852 489999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCcEEEEEcCCHHHHHHHHhccceeEEEEcCCc----C-CCCCCCCCCCCC-CcCcHHHHHhcceeeEEEE
Q 001665 596 AIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPV----P-SSFSSINESGEF-NFCGKSGVQFYTQIKTVAQ 669 (1035)
Q Consensus 596 AI~laN~~~~GLsasVfS~d~~~a~~~a~~l~sG~V~IN~~~----~-~PfGG~g~SG~G-~~~G~~g~~~ft~~k~v~~ 669 (1035)
||+++|+++|||++||||+|.+.+.++++++++|.|+||+.. . +||||+|.||+| +.+|.+|+++|++.|++++
T Consensus 391 ai~~aN~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~g~~~~l~~ft~~k~i~~ 470 (472)
T TIGR03250 391 AIRISNSTAYGLSSGVCTNRLDYITRFIAELQVGTVNVWEVPGYRLELTPFGGIKDSGLGYKEGVQEAMKSFTNLKTYSL 470 (472)
T ss_pred HHHHHhCCCccceEEEEcCCHHHHHHHHHHCCcceEEEcCCCCCCCCCCCCCccccccCCCCCChHHHHHHhhceEEEEE
Confidence 999999999999999999999999999999999999999753 2 799999999999 5567899999999999976
Q ss_pred ec
Q 001665 670 QW 671 (1035)
Q Consensus 670 ~~ 671 (1035)
.|
T Consensus 471 ~~ 472 (472)
T TIGR03250 471 PW 472 (472)
T ss_pred eC
Confidence 54
|
It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. |
| >cd07145 ALDH_LactADH_F420-Bios Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-84 Score=766.69 Aligned_cols=444 Identities=32% Similarity=0.485 Sum_probs=418.7
Q ss_pred EEeecCCCCCeEEEecCCCHHHHHHHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHH
Q 001665 219 IDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQR 298 (1035)
Q Consensus 219 ~~v~nP~tGevi~~v~~~s~~dv~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e~La~~i~~etGk~~~eA~~ 298 (1035)
++++||+||+++++++.++.+|+++++++|++||+.|+.++.++|.++|++++++|+++.++|++++++|+||+..+++.
T Consensus 1 ~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ 80 (456)
T cd07145 1 IEVRNPANGEVIDTVPSLSREEVREAIEVAEKAKDVMSNLPAYKRYKILMKVAELIERRKEELAKLLTIEVGKPIKQSRV 80 (456)
T ss_pred CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHH
Confidence 35789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcCccccCCC----CCCcceeeeccceeEEEECCCCcchhchHHHHHHHHhcCCEEEEeCCC
Q 001665 299 DVLFGLEVVEQACAVATLQIGEFVPNAL----CGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSE 374 (1035)
Q Consensus 299 EV~~a~~~l~~~~~~a~~~~g~~~~~~~----~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~ALaaGNaVVlKPS~ 374 (1035)
|+..+++.++++++.+....++...... .+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+
T Consensus 81 ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~ 160 (456)
T cd07145 81 EVERTIRLFKLAAEEAKVLRGETIPVDAYEYNERRIAFTVREPIGVVGAITPFNFPANLFAHKIAPAIAVGNSVVVKPSS 160 (456)
T ss_pred HHHHHHHHHHHHHHHHHHhcCccccCccccccCCceeEEEEecceeEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCc
Confidence 9999999999998877665554322111 123456789999999999999999999999999999999999999999
Q ss_pred CChhHHHHHHHHHHHhCCCCCcEEEeecc-hhhHhhhhcCCCccEEEEeccchHHHHHHHHHHhcCCceeecCCCcceEE
Q 001665 375 KNPGTSMILAALAMEAGLPDGVLNIVHGT-NDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAI 453 (1035)
Q Consensus 375 ~ap~ta~~L~ell~eAGlP~gvv~vV~g~-~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~l~Pv~lElGGknp~I 453 (1035)
.+|.++.+|+++|.++|+|+|++|+|+|+ .+.+..|+.|+++++|+||||+.+|+.|+++++++++|+++|+|||||+|
T Consensus 161 ~~p~~~~~l~~~~~~ag~p~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~v~lElgG~n~~i 240 (456)
T cd07145 161 NTPLTAIELAKILEEAGLPPGVINVVTGYGSEVGDEIVTNPKVNMISFTGSTAVGLLIASKAGGTGKKVALELGGSDPMI 240 (456)
T ss_pred cchHHHHHHHHHHHHcCCCcccEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCceEEecCCCCeeE
Confidence 99999999999999999999999999995 57788999999999999999999999999999999999999999999999
Q ss_pred EcCCCCHHHHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHhcccccCCCCCCCcCCCcCHHHHHHHHHH
Q 001665 454 IMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRL 532 (1035)
Q Consensus 454 V~~dADld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d~~~~~Gpli~~~~~~rl~~~ 532 (1035)
|++|||++.|++.|++++|.|+||.|+++++|||+++++ +|+++|+++++.+++|+|.++++++||++++.+++++.++
T Consensus 241 V~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~ 320 (456)
T cd07145 241 VLKDADLERAVSIAVRGRFENAGQVCNAVKRILVEEEVYDKFLKLLVEKVKKLKVGDPLDESTDLGPLISPEAVERMENL 320 (456)
T ss_pred ECCCCCHHHHHHHHHHHHHhccCCCCccCeeEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCcCCCcCHHHHHHHHHH
Confidence 999999999999999999999999999999999999998 9999999999999999999999999999999999999999
Q ss_pred HHHHHHCCCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecCCHHHHHHHHHhcCCCcEEEEE
Q 001665 533 IQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIF 612 (1035)
Q Consensus 533 i~~av~~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI~laN~~~~GLsasVf 612 (1035)
|++++++|+++++||.. ..|+|++|||+.++++++.+++||+||||++|++|+|++|||+++|+.+|||++|||
T Consensus 321 i~~a~~~ga~vl~gg~~------~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~ 394 (456)
T cd07145 321 VNDAVEKGGKILYGGKR------DEGSFFPPTVLENDTPDMIVMKEEVFGPVLPIAKVKDDEEAVEIANSTEYGLQASVF 394 (456)
T ss_pred HHHHHHCCCEEEeCCCC------CCCeEECCEeecCCCCCChHhhCCCCCceEEEEEECCHHHHHHHHhCCCCCceEEEE
Confidence 99999999999999863 138999999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHhccceeEEEEcCCc-----CCCCCCCCCCCCCCcCcHHHHHhcceeeEEE
Q 001665 613 TSSGLAARKFQNEIEARLVGINVPV-----PSSFSSINESGEFNFCGKSGVQFYTQIKTVA 668 (1035)
Q Consensus 613 S~d~~~a~~~a~~l~sG~V~IN~~~-----~~PfGG~g~SG~G~~~G~~g~~~ft~~k~v~ 668 (1035)
|+|.+++.++++++++|+|+||+.. .+||||+|.||+|+++|++|+++|++.|+|.
T Consensus 395 t~d~~~~~~~~~~~~~g~v~vN~~~~~~~~~~pfgG~~~SG~G~~~g~~~l~~f~~~k~v~ 455 (456)
T cd07145 395 TNDINRALKVARELEAGGVVINDSTRFRWDNLPFGGFKKSGIGREGVRYTMLEMTEEKTIV 455 (456)
T ss_pred CCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCcccccCCcCchHHHHHHhhceeEEe
Confidence 9999999999999999999999752 2899999999999999999999999999985
|
NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. |
| >cd07090 ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-84 Score=765.10 Aligned_cols=449 Identities=33% Similarity=0.494 Sum_probs=422.8
Q ss_pred eecCCCCCeEEEecCCCHHHHHHHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHH
Q 001665 221 VINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDV 300 (1035)
Q Consensus 221 v~nP~tGevi~~v~~~s~~dv~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e~La~~i~~etGk~~~eA~~EV 300 (1035)
++||+||+++++++.++.++++++++.|++||+.|+.++.++|.++|+++++.|+++.++|++++++|+||++.+++.|+
T Consensus 1 ~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev 80 (457)
T cd07090 1 VIEPATGEVLATVHCAGAEDVDLAVKSAKAAQKEWSATSGMERGRILRKAADLLRERNDEIARLETIDNGKPIEEARVDI 80 (457)
T ss_pred CcCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhcCccccCCCCCCcceeeeccceeEEEECCCCcchhchHHHHHHHHhcCCEEEEeCCCCChhHH
Q 001665 301 LFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTS 380 (1035)
Q Consensus 301 ~~a~~~l~~~~~~a~~~~g~~~~~~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~ALaaGNaVVlKPS~~ap~ta 380 (1035)
..+++.++++++.+....+...... .+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~~~~~ 159 (457)
T cd07090 81 DSSADCLEYYAGLAPTLSGEHVPLP-GGSFAYTRREPLGVCAGIGAWNYPIQIASWKSAPALACGNAMVYKPSPFTPLTA 159 (457)
T ss_pred HHHHHHHHHHHHHHHHhCCeeeccC-CCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHhcCCeeeecCCCcCcHHH
Confidence 9999999999887766555433221 355678899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCCcEEEeecchhhHhhhhcCCCccEEEEeccchHHHHHHHHHHhcCCceeecCCCcceEEEcCCCCH
Q 001665 381 MILAALAMEAGLPDGVLNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMPDASI 460 (1035)
Q Consensus 381 ~~L~ell~eAGlP~gvv~vV~g~~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~l~Pv~lElGGknp~IV~~dADl 460 (1035)
.+|+++|.++|+|+|++|+|+|+.+.+..|+.|+++++|+||||+.+|+.|+++++++++|+++|+|||||+||++|||+
T Consensus 160 ~~l~~~~~~aGlP~g~~~~v~g~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~~~lelgG~~p~iV~~dAdl 239 (457)
T cd07090 160 LLLAEILTEAGLPDGVFNVVQGGGETGQLLCEHPDVAKVSFTGSVPTGKKVMSAAAKGIKHVTLELGGKSPLIIFDDADL 239 (457)
T ss_pred HHHHHHHHHcCCCcccEEEEeCChhhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCCceEEecCCCCceEECCCCCH
Confidence 99999999999999999999987788899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHhcccccCCCCCCCcCCCcCHHHHHHHHHHHHHHHHC
Q 001665 461 DATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDN 539 (1035)
Q Consensus 461 d~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d~~~~~Gpli~~~~~~rl~~~i~~av~~ 539 (1035)
+.|++.|++++|.++||.|+++++||||++++ +|+++|+++++.+++|+|.++++++||++++.+++++.++|++++++
T Consensus 240 ~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ 319 (457)
T cd07090 240 ENAVNGAMMANFLSQGQVCSNGTRVFVQRSIKDEFTERLVERTKKIRIGDPLDEDTQMGALISEEHLEKVLGYIESAKQE 319 (457)
T ss_pred HHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcccccCHHHHHHHHHHHHHHHHC
Confidence 99999999999999999999999999999998 99999999999999999999999999999999999999999999999
Q ss_pred CCcEeeCCcccccC-CCCCCceeeceEEecCCCCCccccccccCcceeEEecCCHHHHHHHHHhcCCCcEEEEEcCCHHH
Q 001665 540 GASLLLDGRNIVVP-GYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLA 618 (1035)
Q Consensus 540 GAkvl~gG~~~~~p-~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI~laN~~~~GLsasVfS~d~~~ 618 (1035)
|+++++||...... +..+|+|++|||+.+++++|.+++||+||||++|++|+|+||||+++|+.+|||++||||+|.+.
T Consensus 320 Ga~v~~gg~~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~deai~~~n~~~~gLsa~i~t~d~~~ 399 (457)
T cd07090 320 GAKVLCGGERVVPEDGLENGFYVSPCVLTDCTDDMTIVREEIFGPVMSILPFDTEEEVIRRANDTTYGLAAGVFTRDLQR 399 (457)
T ss_pred CCEEEECCCcCcccccCCCCeeECCEEEecCCCCChHHhCCCCCCeEEEEEECCHHHHHHHHhCCCcCceEEEEcCCHHH
Confidence 99999999753211 12368999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhccceeEEEEcCCc----CCCCCCCCCCCCCCcCcHHHHHhcceeeEEEEe
Q 001665 619 ARKFQNEIEARLVGINVPV----PSSFSSINESGEFNFCGKSGVQFYTQIKTVAQQ 670 (1035)
Q Consensus 619 a~~~a~~l~sG~V~IN~~~----~~PfGG~g~SG~G~~~G~~g~~~ft~~k~v~~~ 670 (1035)
++++++++++|.|+||+.. .+||||+|.||+|+++|.+|+++||+.|+++..
T Consensus 400 ~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~~~~f~~~k~~~~~ 455 (457)
T cd07090 400 AHRVIAQLQAGTCWINTYNISPVEVPFGGYKQSGFGRENGTAALEHYTQLKTVYVE 455 (457)
T ss_pred HHHHHHhCCcCeEEECCCCCCCCCCCcCCCccCcCCccchHHHHHHHhCeEEEEEe
Confidence 9999999999999999853 289999999999999999999999999998753
|
NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. |
| >cd07110 ALDH_F10_BADH Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-84 Score=764.26 Aligned_cols=446 Identities=31% Similarity=0.451 Sum_probs=418.9
Q ss_pred eecCCCCCeEEEecCCCHHHHHHHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHH
Q 001665 221 VINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDV 300 (1035)
Q Consensus 221 v~nP~tGevi~~v~~~s~~dv~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e~La~~i~~etGk~~~eA~~EV 300 (1035)
++||+||+++++++.++.+++++++++|++||+.|+.++.++|.++|++++++|+++.++|+++++.|+||+..++..|+
T Consensus 1 ~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev 80 (456)
T cd07110 1 VINPATEATIGEIPAATAEDVDAAVRAARRAFPRWKKTTGAERAKYLRAIAEGVRERREELAELEARDNGKPLDEAAWDV 80 (456)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhcC---ccccCCCCCCcceeeeccceeEEEECCCCcchhchHHHHHHHHhcCCEEEEeCCCCCh
Q 001665 301 LFGLEVVEQACAVATLQIG---EFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNP 377 (1035)
Q Consensus 301 ~~a~~~l~~~~~~a~~~~g---~~~~~~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~ALaaGNaVVlKPS~~ap 377 (1035)
..+++.++++++.+..... ...+....+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p 160 (456)
T cd07110 81 DDVAGCFEYYADLAEQLDAKAERAVPLPSEDFKARVRREPVGVVGLITPWNFPLLMAAWKVAPALAAGCTVVLKPSELTS 160 (456)
T ss_pred HHHHHHHHHHHHHHHHhhccCCccccCCCCCceeEEEEecceeEEEECCCChHHHHHHHHHHHHHHcCCEEEEECcccch
Confidence 9999999998887765432 2222222355678899999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCCCCcEEEeecch-hhHhhhhcCCCccEEEEeccchHHHHHHHHHHhcCCceeecCCCcceEEEcC
Q 001665 378 GTSMILAALAMEAGLPDGVLNIVHGTN-DVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMP 456 (1035)
Q Consensus 378 ~ta~~L~ell~eAGlP~gvv~vV~g~~-e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~l~Pv~lElGGknp~IV~~ 456 (1035)
+++..|+++|.++|+|+|+||+|+|+. +.+..|+.|+++++|+||||+.+|+.|+++++++++|+++|+|||||+||++
T Consensus 161 ~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~aa~~~~~~~lElgG~~~~iV~~ 240 (456)
T cd07110 161 LTELELAEIAAEAGLPPGVLNVVTGTGDEAGAPLAAHPGIDKISFTGSTATGSQVMQAAAQDIKPVSLELGGKSPIIVFD 240 (456)
T ss_pred HHHHHHHHHHHHcCCCCCcEEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCeEEEEcCCCCeeEECC
Confidence 999999999999999999999999954 6789999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHhcccccCCCCCCCcCCCcCHHHHHHHHHHHHH
Q 001665 457 DASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQN 535 (1035)
Q Consensus 457 dADld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d~~~~~Gpli~~~~~~rl~~~i~~ 535 (1035)
|||++.|++.|++++|+++||.|+++++|||+++++ +|+++|+++++++++|+|.++++++||++++.+++++.+++++
T Consensus 241 dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~~~~~v~~ 320 (456)
T cd07110 241 DADLEKAVEWAMFGCFWNNGQICSATSRLLVHESIADAFLERLATAAEAIRVGDPLEEGVRLGPLVSQAQYEKVLSFIAR 320 (456)
T ss_pred CCCHHHHHHHHHHHHHhcCCCCCCCCceEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999998 9999999999999999999999999999999999999999999
Q ss_pred HHHCCCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecCCHHHHHHHHHhcCCCcEEEEEcCC
Q 001665 536 AVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSS 615 (1035)
Q Consensus 536 av~~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI~laN~~~~GLsasVfS~d 615 (1035)
++.+||++++||..... ...|+|++|||+.+++++|.+++||+||||++|++|+|+||||+++|+++|||+++|||+|
T Consensus 321 a~~~Ga~~~~gg~~~~~--~~~~~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d 398 (456)
T cd07110 321 GKEEGARLLCGGRRPAH--LEKGYFIAPTVFADVPTDSRIWREEIFGPVLCVRSFATEDEAIALANDSEYGLAAAVISRD 398 (456)
T ss_pred HHhCCCEEEeCCCcccc--cCCCCcCCCEEEecCCCCChHhhCCCcCCeEEEEecCCHHHHHHHHhCCCCCceEEEECCC
Confidence 99999999999874211 1368999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccceeEEEEcCCcC----CCCCCCCCCCCCCcCcHHHHHhcceeeEEE
Q 001665 616 GLAARKFQNEIEARLVGINVPVP----SSFSSINESGEFNFCGKSGVQFYTQIKTVA 668 (1035)
Q Consensus 616 ~~~a~~~a~~l~sG~V~IN~~~~----~PfGG~g~SG~G~~~G~~g~~~ft~~k~v~ 668 (1035)
.++++++++++++|+|+||+... +||||+|.||+|+++|.+|+++||+.|+++
T Consensus 399 ~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~i~ 455 (456)
T cd07110 399 AERCDRVAEALEAGIVWINCSQPCFPQAPWGGYKRSGIGRELGEWGLDNYLEVKQIT 455 (456)
T ss_pred HHHHHHHHHhCCcceEEECCCCCCCCCCCCCCcccccCCccchHHHHHHhcceeEEe
Confidence 99999999999999999998642 899999999999999999999999999875
|
Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. |
| >TIGR03240 arg_catab_astD succinylglutamic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-84 Score=764.49 Aligned_cols=460 Identities=28% Similarity=0.377 Sum_probs=424.8
Q ss_pred eEEcCEEecCCCCCeEEeecCCCCCeEEEecCCCHHHHHHHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHHhHHHHHH
Q 001665 204 NFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAM 283 (1035)
Q Consensus 204 ~~I~G~~~~~~~~~~~~v~nP~tGevi~~v~~~s~~dv~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e~La~ 283 (1035)
+||+|+|+.+ ++..++++||+||+++++++.++.+|+++++++|++||+.|+.++.++|.++|++++++|++++++|++
T Consensus 1 ~~i~g~~~~~-~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~ 79 (484)
T TIGR03240 1 LFIDGKWRAG-QGESFSSTNPATQEVLWQGAAASAAQVEAAVAAARAAFPAWARLSLEERIAVVQRFAALLEERKEALAR 79 (484)
T ss_pred CeECCEEecC-CCCEEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 4899999875 457899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCccccCCCCCCcceeeeccceeEEEECCCCcchhchHHHHHHHHh
Q 001665 284 NITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVT 363 (1035)
Q Consensus 284 ~i~~etGk~~~eA~~EV~~a~~~l~~~~~~a~~~~g~~~~~~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~ALa 363 (1035)
++++|+||+..+++.|+..+++.+++++.......+..... ..+...++.++|+|||++|+|||||+.++++++++||+
T Consensus 80 ~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~i~~ALa 158 (484)
T TIGR03240 80 VIARETGKPLWETRTEVASMIGKVAISIKAYHERTGESENP-MPDGRAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALL 158 (484)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccC-CCCceeEEEEecccEEEEECCCchHHHHHHHHHHHHHH
Confidence 99999999999999999999999998776655444432211 22334677899999999999999999999999999999
Q ss_pred cCCEEEEeCCCCChhHHHHHHHHHHHhCCCCCcEEEeecchhhHhhhhcCCCccEEEEeccchHHHHHHHHHHhc-CCce
Q 001665 364 CGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAAR-GKRV 442 (1035)
Q Consensus 364 aGNaVVlKPS~~ap~ta~~L~ell~eAGlP~gvv~vV~g~~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~-l~Pv 442 (1035)
+||+||+|||+.+|+++..+++++.++|+|+|+||+|+|+.+.+..|+.|++||+|+||||+.+|+.|++.+++. ++++
T Consensus 159 aGN~VVlKPs~~tp~t~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~L~~~~~vd~V~fTGS~~~G~~i~~~aa~~~~~~~ 238 (484)
T TIGR03240 159 AGNTVVFKPSELTPWVAEETVKLWEKAGLPAGVLNLVQGARETGVALAAHPDIDGLLFTGSSNTGHLLHRQFAGRPEKIL 238 (484)
T ss_pred cCCEEEEECCccccHHHHHHHHHHHHhCcCcccEEEEeCCHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhhcCCCcE
Confidence 999999999999999999999999999999999999999778889999999999999999999999999988765 6889
Q ss_pred eecCCCcceEEEcCCCCHHHHHHHHHHHHhccCCCCccCCceEEEeCcc-H-HHHHHHHHHHHhcccccC-CCCCCCcCC
Q 001665 443 QSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSS-V-QWEDELVELAKALKVNVG-TDASADVGP 519 (1035)
Q Consensus 443 ~lElGGknp~IV~~dADld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i-~-~f~e~Lv~~~~~lkvG~p-~d~~~~~Gp 519 (1035)
++|+|||||+||++|||++.|++.+++++|+|+||.|+++++||||+++ + +|+++|++.++++++|++ .++++++||
T Consensus 239 ~lElGGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~~~~d~f~~~l~~~~~~~~~g~~~~~~~~~~gp 318 (484)
T TIGR03240 239 ALEMGGNNPLIVDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPDGAQGDAFLARLVEVAERLTVGAWDAEPQPFMGA 318 (484)
T ss_pred EEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeccccHHHHHHHHHHHHHhcccCCCCcCCCCcccc
Confidence 9999999999999999999999999999999999999999999999997 4 899999999999999997 477889999
Q ss_pred CcCHHHHHHHHHHHHHHHHCCCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecCCHHHHHHH
Q 001665 520 VVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKM 599 (1035)
Q Consensus 520 li~~~~~~rl~~~i~~av~~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI~l 599 (1035)
++++.+++++.+++++++++|+++++||... +..|.|++|||+ ++++++.+++||+||||++|++|+|++|||++
T Consensus 319 li~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~----~~~~~~i~PTvl-~v~~~~~i~~eE~FGPVl~v~~~~~~~eai~~ 393 (484)
T TIGR03240 319 VISLQAAQRLLAAQAKLLALGGKSLLAMRQL----DPGAALLTPGII-DVTGVAELPDEEHFGPLLQVIRYDDFDEAIAI 393 (484)
T ss_pred cCCHHHHHHHHHHHHHHHHCCCEEEeCCCcC----CCCCEEEcCEEE-ccCCCCHHHhCCCcCCeEEEEEeCCHHHHHHH
Confidence 9999999999999999999999999988642 235789999999 69999999999999999999999999999999
Q ss_pred HHhcCCCcEEEEEcCCHHHHHHHHhccceeEEEEcCCc----C-CCCCCCCCCCCCCcCcHHHHHhcceeeEEEEec
Q 001665 600 VNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPV----P-SSFSSINESGEFNFCGKSGVQFYTQIKTVAQQW 671 (1035)
Q Consensus 600 aN~~~~GLsasVfS~d~~~a~~~a~~l~sG~V~IN~~~----~-~PfGG~g~SG~G~~~G~~g~~~ft~~k~v~~~~ 671 (1035)
+|+++|||+++|||+|.+.+++++.++++|.|+||+.. . +||||+|.||+|+++|..+++ |++.|++.++.
T Consensus 394 ~n~~~~gL~~~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~-~~~~~~~~~~~ 469 (484)
T TIGR03240 394 ANNTRFGLSAGLLSDDRELYDRFLLEIRAGIVNWNKPLTGASSAAPFGGIGASGNHRPSAYYAAD-YCAYPVASLEA 469 (484)
T ss_pred HhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEECCCCCCCCCCCcCCcccccCCCCCchHHHh-heeeeEEEEec
Confidence 99999999999999999999999999999999999763 1 799999999999999977766 99999998874
|
Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism. |
| >cd07120 ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-84 Score=761.85 Aligned_cols=445 Identities=27% Similarity=0.397 Sum_probs=418.5
Q ss_pred eecCCCCCeEEEecCCCHHHHHHHHHHHHHhhHh--hhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHH
Q 001665 221 VINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPA--WKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQR 298 (1035)
Q Consensus 221 v~nP~tGevi~~v~~~s~~dv~~av~~Ar~A~~~--W~~~s~~~R~~iL~~la~~L~~~~e~La~~i~~etGk~~~eA~~ 298 (1035)
++||+||+++++++.++.+|+++||+.|++||+. |+. +.++|.++|++++++|++++++|++++++|+||+..+++.
T Consensus 1 ~~nP~t~~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~-~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ 79 (455)
T cd07120 1 SIDPATGEVIGTYADGGVAEAEAAIAAARRAFDETDWAH-DPRLRARVLLELADAFEANAERLARLLALENGKILGEARF 79 (455)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 4699999999999999999999999999999985 998 9999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcCccccCCCCCCcceeeeccceeEEEECCCCcchhchHHHHHHHHhcCCEEEEeCCCCChh
Q 001665 299 DVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPG 378 (1035)
Q Consensus 299 EV~~a~~~l~~~~~~a~~~~g~~~~~~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~ALaaGNaVVlKPS~~ap~ 378 (1035)
|+..+++.++++++.+....+..... ..+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.
T Consensus 80 Ev~~~i~~l~~~~~~~~~~~g~~~~~-~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~vvlKps~~~~~ 158 (455)
T cd07120 80 EISGAISELRYYAGLARTEAGRMIEP-EPGSFSLVLREPMGVAGIIVPWNSPVVLLVRSLAPALAAGCTVVVKPAGQTAQ 158 (455)
T ss_pred HHHHHHHHHHHHHHHHHHhcCccccc-CCCceEEEEEecceeEEEECCCchHHHHHHHHHHHHHHcCCEEEeECCCCChH
Confidence 99999999999998877665543322 23455688999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHH-hCCCCCcEEEeecc-hhhHhhhhcCCCccEEEEeccchHHHHHHHHHHhcCCceeecCCCcceEEEcC
Q 001665 379 TSMILAALAME-AGLPDGVLNIVHGT-NDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMP 456 (1035)
Q Consensus 379 ta~~L~ell~e-AGlP~gvv~vV~g~-~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~l~Pv~lElGGknp~IV~~ 456 (1035)
++..|+++|.+ +|+|+|++|+|+|+ .+.+..|+.|+++++|+||||+.+|+.|++.++++++|+++|+|||||+||++
T Consensus 159 ~~~~l~~~~~~aag~P~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~~~lElGG~~~~IV~~ 238 (455)
T cd07120 159 INAAIIRILAEIPSLPAGVVNLFTESGSEGAAHLVASPDVDVISFTGSTATGRAIMAAAAPTLKRLGLELGGKTPCIVFD 238 (455)
T ss_pred HHHHHHHHHHHhcCCCccceEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEECCCCCeeEECC
Confidence 99999999999 79999999999985 56788999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHhcccccCCCCCCCcCCCcCHHHHHHHHHHHHH
Q 001665 457 DASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQN 535 (1035)
Q Consensus 457 dADld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d~~~~~Gpli~~~~~~rl~~~i~~ 535 (1035)
|||++.|++.|++++|+++||.|+++++|||+++++ +|+++|+++++++++|+|.++++++||++++.+++++.++|++
T Consensus 239 daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~~~~~i~~ 318 (455)
T cd07120 239 DADLDAALPKLERALTIFAGQFCMAGSRVLVQRSIADEVRDRLAARLAAVKVGPGLDPASDMGPLIDRANVDRVDRMVER 318 (455)
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCCcCCccCHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999998 9999999999999999999999999999999999999999999
Q ss_pred HHHCCCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecCCHHHHHHHHHhcCCCcEEEEEcCC
Q 001665 536 AVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSS 615 (1035)
Q Consensus 536 av~~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI~laN~~~~GLsasVfS~d 615 (1035)
++++|+++++||..... ....|+|++|||+.+++++|.+++||+||||++|++|+|+||||+++|+++|||+++|||+|
T Consensus 319 a~~~ga~~~~~g~~~~~-~~~~g~~~~Ptvl~~~~~d~~i~~~E~FgPvl~v~~~~~~deai~~~n~~~~gLs~~ift~d 397 (455)
T cd07120 319 AIAAGAEVVLRGGPVTE-GLAKGAFLRPTLLEVDDPDADIVQEEIFGPVLTLETFDDEAEAVALANDTDYGLAASVWTRD 397 (455)
T ss_pred HHHCCCEEEeCCccCcc-cCCCCceECCEEEecCCCCChhhhCcCcCceEEEeecCCHHHHHHHHhCCCCCceEEEEcCC
Confidence 99999999998764221 12368999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccceeEEEEcCCcC----CCCCCCCCCCCCCcCcHHHHHhcceeeEEE
Q 001665 616 GLAARKFQNEIEARLVGINVPVP----SSFSSINESGEFNFCGKSGVQFYTQIKTVA 668 (1035)
Q Consensus 616 ~~~a~~~a~~l~sG~V~IN~~~~----~PfGG~g~SG~G~~~G~~g~~~ft~~k~v~ 668 (1035)
.+++++++.++++|.|+||++.. +||||+|.||+|++||++++++||+.|+++
T Consensus 398 ~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~ft~~k~v~ 454 (455)
T cd07120 398 LARAMRVARAIRAGTVWINDWNKLFAEAEEGGYRQSGLGRLHGVAALEDFIEYKHIY 454 (455)
T ss_pred HHHHHHHHHhcCcceEEECCCCCCCCCCCcCCccccccCccchHHHHHHHhceeEEe
Confidence 99999999999999999998642 899999999999999999999999999985
|
Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. |
| >cd07148 ALDH_RL0313 Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-84 Score=762.35 Aligned_cols=442 Identities=27% Similarity=0.368 Sum_probs=415.7
Q ss_pred EeecCCCCCeEEEecCCCHHHHHHHHHHHHHhhHh-hhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHH
Q 001665 220 DVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPA-WKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQR 298 (1035)
Q Consensus 220 ~v~nP~tGevi~~v~~~s~~dv~~av~~Ar~A~~~-W~~~s~~~R~~iL~~la~~L~~~~e~La~~i~~etGk~~~eA~~ 298 (1035)
+++||+||+++++++.++.+++++++++|++||+. |+.++.++|.++|++++++|+++.++|++++++|+||++.+++.
T Consensus 2 ~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~~~~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ 81 (455)
T cd07148 2 EVVNPFDLKPIGEVPTVDWAAIDKALDTAHALFLDRNNWLPAHERIAILERLADLMEERADELALLIAREGGKPLVDAKV 81 (455)
T ss_pred CccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 47899999999999999999999999999999998 46799999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcCccccCC----CCCCcceeeeccceeEEEECCCCcchhchHHHHHHHHhcCCEEEEeCCC
Q 001665 299 DVLFGLEVVEQACAVATLQIGEFVPNA----LCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSE 374 (1035)
Q Consensus 299 EV~~a~~~l~~~~~~a~~~~g~~~~~~----~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~ALaaGNaVVlKPS~ 374 (1035)
|+..+++.++++++.+....+...+.. ..+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+
T Consensus 82 ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~ 161 (455)
T cd07148 82 EVTRAIDGVELAADELGQLGGREIPMGLTPASAGRIAFTTREPIGVVVAISAFNHPLNLIVHQVAPAIAAGCPVIVKPAL 161 (455)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcccccccccCCCCceEEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEeeCCC
Confidence 999999999999887766544322211 1234567889999999999999999999999999999999999999999
Q ss_pred CChhHHHHHHHHHHHhCCCCCcEEEeecchhhHhhhhcCCCccEEEEeccchHHHHHHHHHHhcCCceeecCCCcceEEE
Q 001665 375 KNPGTSMILAALAMEAGLPDGVLNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAII 454 (1035)
Q Consensus 375 ~ap~ta~~L~ell~eAGlP~gvv~vV~g~~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~l~Pv~lElGGknp~IV 454 (1035)
.+|.++.+|+++|.++|+|+|+||+|+|+.+.+..|+.|++||+|+||||+.+|+.|+++++. ++|+++|+|||||+||
T Consensus 162 ~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~L~~~~~v~~v~fTGs~~~G~~i~~~aa~-~~~~~lElGG~~p~iV 240 (455)
T cd07148 162 ATPLSCLAFVDLLHEAGLPEGWCQAVPCENAVAEKLVTDPRVAFFSFIGSARVGWMLRSKLAP-GTRCALEHGGAAPVIV 240 (455)
T ss_pred cccHHHHHHHHHHHHcCCCcCcEEEEeCChHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhc-CCcEEEecCCCCceEE
Confidence 999999999999999999999999999977888999999999999999999999999998876 5999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHhcccccCCCCCCCcCCCcCHHHHHHHHHHH
Q 001665 455 MPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLI 533 (1035)
Q Consensus 455 ~~dADld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d~~~~~Gpli~~~~~~rl~~~i 533 (1035)
++|||++.|++.|++++|+++||.|+++++|||+++++ +|+++|+++++++++|+|.++++++||++++.+++++.++|
T Consensus 241 ~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i 320 (455)
T cd07148 241 DRSADLDAMIPPLVKGGFYHAGQVCVSVQRVFVPAEIADDFAQRLAAAAEKLVVGDPTDPDTEVGPLIRPREVDRVEEWV 320 (455)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCCccCCeEEEEcHhHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCcCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999998 89999999999999999999999999999999999999999
Q ss_pred HHHHHCCCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecCCHHHHHHHHHhcCCCcEEEEEc
Q 001665 534 QNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFT 613 (1035)
Q Consensus 534 ~~av~~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI~laN~~~~GLsasVfS 613 (1035)
++++++|+++++||.. ..+.|++|||+.++++++.+++||+||||++|++|+|++|||+++|+++|||+++|||
T Consensus 321 ~~a~~~Ga~vl~gg~~------~~~~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~a~i~t 394 (455)
T cd07148 321 NEAVAAGARLLCGGKR------LSDTTYAPTVLLDPPRDAKVSTQEIFGPVVCVYSYDDLDEAIAQANSLPVAFQAAVFT 394 (455)
T ss_pred HHHHhCCCEEEeCCcc------CCCCeEcCEEEeCCCCCCHHHhCCCcCCeEEEEecCCHHHHHHHHhCCCCCceEEEEc
Confidence 9999999999999864 2478999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhccceeEEEEcCCcC-----CCCCCCCCCCCCCcCcHHHHHhcceeeEEE
Q 001665 614 SSGLAARKFQNEIEARLVGINVPVP-----SSFSSINESGEFNFCGKSGVQFYTQIKTVA 668 (1035)
Q Consensus 614 ~d~~~a~~~a~~l~sG~V~IN~~~~-----~PfGG~g~SG~G~~~G~~g~~~ft~~k~v~ 668 (1035)
+|.+.+.++++++++|.|+||++.. +||||+|.||+|+++|.+|+++|++.|+++
T Consensus 395 ~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~~~ 454 (455)
T cd07148 395 KDLDVALKAVRRLDATAVMVNDHTAFRVDWMPFAGRRQSGYGTGGIPYTMHDMTQEKMAV 454 (455)
T ss_pred CCHHHHHHHHHHcCcCeEEECCCCCCCCCCCCCCcchhcccCCCchHHHHHHhhceeEEe
Confidence 9999999999999999999998631 799999999999999999999999999885
|
Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. |
| >cd07109 ALDH_AAS00426 Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-84 Score=761.23 Aligned_cols=445 Identities=32% Similarity=0.429 Sum_probs=418.3
Q ss_pred eecCCCCCeEEEecCCCHHHHHHHHHHHHHhhHhhh-CCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHH
Q 001665 221 VINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWK-NTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRD 299 (1035)
Q Consensus 221 v~nP~tGevi~~v~~~s~~dv~~av~~Ar~A~~~W~-~~s~~~R~~iL~~la~~L~~~~e~La~~i~~etGk~~~eA~~E 299 (1035)
++||+||+++++++.++.+|+++++++|++||+.|. .++.++|.++|++++++|+++.++|++++++|+||++.+++.|
T Consensus 1 ~~~P~tg~~i~~~~~~~~~dv~~av~~a~~A~~~~~~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~e 80 (454)
T cd07109 1 VFDPSTGEVFARIARGGAADVDRAVQAARRAFESGWLRLSPAERGRLLLRIARLIREHADELARLESLDTGKPLTQARAD 80 (454)
T ss_pred CcCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHHHH
Confidence 479999999999999999999999999999999876 9999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhcCccccCCCCCCcceeeeccceeEEEECCCCcchhchHHHHHHHHhcCCEEEEeCCCCChhH
Q 001665 300 VLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGT 379 (1035)
Q Consensus 300 V~~a~~~l~~~~~~a~~~~g~~~~~~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~ALaaGNaVVlKPS~~ap~t 379 (1035)
+..+++.++++++......+...+. ..+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.+
T Consensus 81 v~~~~~~l~~~~~~~~~~~g~~~~~-~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~ 159 (454)
T cd07109 81 VEAAARYFEYYGGAADKLHGETIPL-GPGYFVYTVREPHGVTGHIIPWNYPLQITGRSVAPALAAGNAVVVKPAEDAPLT 159 (454)
T ss_pred HHHHHHHHHHHHHHHHHhcCccccc-CCCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCChHH
Confidence 9999999999988766655443332 234567889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCCCcEEEeec-chhhHhhhhcCCCccEEEEeccchHHHHHHHHHHhcCCceeecCCCcceEEEcCCC
Q 001665 380 SMILAALAMEAGLPDGVLNIVHG-TNDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMPDA 458 (1035)
Q Consensus 380 a~~L~ell~eAGlP~gvv~vV~g-~~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~l~Pv~lElGGknp~IV~~dA 458 (1035)
+..|+++|.++|+|+|+||+|+| +.+.+..|+.|+++++|+||||+.+|+.|++.++++++|+++|+|||||+||++||
T Consensus 160 ~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~p~~lElgG~~~~iV~~da 239 (454)
T cd07109 160 ALRLAELAEEAGLPAGALNVVTGLGAEAGAALVAHPGVDHISFTGSVETGIAVMRAAAENVVPVTLELGGKSPQIVFADA 239 (454)
T ss_pred HHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCcEEEECCCCCceEECCCC
Confidence 99999999999999999999998 56788999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHhcccccCCCCCCCcCCCcCHHHHHHHHHHHHHHH
Q 001665 459 SIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAV 537 (1035)
Q Consensus 459 Dld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d~~~~~Gpli~~~~~~rl~~~i~~av 537 (1035)
|++.|++.|++++|+++||.|+++++|||+++++ +|+++|+++++++++|+|.+ .+++||++++.+++++.++|++++
T Consensus 240 Dl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~G~p~~-~~~~gpli~~~~~~~~~~~i~~a~ 318 (454)
T cd07109 240 DLEAALPVVVNAIIQNAGQTCSAGSRLLVHRSIYDEVLERLVERFRALRVGPGLE-DPDLGPLISAKQLDRVEGFVARAR 318 (454)
T ss_pred CHHHHHHHHHHHHHhccCCCCccCcEEEEcHHHHHHHHHHHHHHHHhCCCCCCcc-cCcCCCccCHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999998 89999999999999999976 689999999999999999999999
Q ss_pred HCCCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecCCHHHHHHHHHhcCCCcEEEEEcCCHH
Q 001665 538 DNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGL 617 (1035)
Q Consensus 538 ~~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI~laN~~~~GLsasVfS~d~~ 617 (1035)
++|+++++||.....+ ...|+|++|||+.++++++.+++||+||||++|++|+|+||||+++|+++|||+++|||+|.+
T Consensus 319 ~~ga~~l~gg~~~~~~-~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deAi~~~n~~~~gL~~~i~t~d~~ 397 (454)
T cd07109 319 ARGARIVAGGRIAEGA-PAGGYFVAPTLLDDVPPDSRLAQEEIFGPVLAVMPFDDEAEAIALANGTDYGLVAGVWTRDGD 397 (454)
T ss_pred hCCCEEEeCCCcCccc-CCCCcEECcEEEecCCCCChhhhCCCCCceEEEEecCCHHHHHHHhhCCCCCceEEEECCCHH
Confidence 9999999998653221 246899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhccceeEEEEcCCc-----CCCCCCCCCCCCCCcCcHHHHHhcceeeEEE
Q 001665 618 AARKFQNEIEARLVGINVPV-----PSSFSSINESGEFNFCGKSGVQFYTQIKTVA 668 (1035)
Q Consensus 618 ~a~~~a~~l~sG~V~IN~~~-----~~PfGG~g~SG~G~~~G~~g~~~ft~~k~v~ 668 (1035)
++.+++.++++|.|+||+.. .+||||+|.||+|+++|.+++++|++.|+++
T Consensus 398 ~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~k~SG~G~~~g~~~~~~f~~~k~i~ 453 (454)
T cd07109 398 RALRVARRLRAGQVFVNNYGAGGGIELPFGGVKKSGHGREKGLEALYNYTQTKTVA 453 (454)
T ss_pred HHHHHHHhcCcCeEEECCCCCCCCCCCCcCCcccCcCCccchHHHHHHHhceeEEe
Confidence 99999999999999999864 1899999999999999999999999999875
|
Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. |
| >cd07150 ALDH_VaniDH_like Pseudomonas putida vanillin dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-84 Score=761.20 Aligned_cols=443 Identities=32% Similarity=0.507 Sum_probs=420.0
Q ss_pred EEeecCCCCCeEEEecCCCHHHHHHHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHH
Q 001665 219 IDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQR 298 (1035)
Q Consensus 219 ~~v~nP~tGevi~~v~~~s~~dv~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e~La~~i~~etGk~~~eA~~ 298 (1035)
++++||+||+++++++.++.++++++|++|++||+.|+.++.++|.++|+++++.|+++.++|+++++.|+||++.+++.
T Consensus 1 ~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ 80 (451)
T cd07150 1 FDDLNPADGSVYARVAVGSRQDAERAIAAAYDAFPAWAATTPSERERILLKAAEIMERRADDLIDLLIDEGGSTYGKAWF 80 (451)
T ss_pred CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHH
Confidence 35789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcCccccCCCCCCcceeeeccceeEEEECCCCcchhchHHHHHHHHhcCCEEEEeCCCCChh
Q 001665 299 DVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPG 378 (1035)
Q Consensus 299 EV~~a~~~l~~~~~~a~~~~g~~~~~~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~ALaaGNaVVlKPS~~ap~ 378 (1035)
|+..+++.+++++.......+...+....+...+.+++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.
T Consensus 81 ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~ 160 (451)
T cd07150 81 ETTFTPELLRAAAGECRRVRGETLPSDSPGTVSMSVRRPLGVVAGITPFNYPLILATKKVAFALAAGNTVVLKPSEETPV 160 (451)
T ss_pred HHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecccEEEEECCCccHHHHHHHHHHHHHhcCCeEEEECCccCcH
Confidence 99999999999888776655543333224556788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCCcEEEeecc-hhhHhhhhcCCCccEEEEeccchHHHHHHHHHHhcCCceeecCCCcceEEEcCC
Q 001665 379 TSMILAALAMEAGLPDGVLNIVHGT-NDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMPD 457 (1035)
Q Consensus 379 ta~~L~ell~eAGlP~gvv~vV~g~-~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~l~Pv~lElGGknp~IV~~d 457 (1035)
++..|+++|.++|+|+|+||+|+|+ .+.+..|+.|++|++|+||||+.+|+.|++.++++++|+++|+|||||+||++|
T Consensus 161 t~~~l~~~~~~ag~P~g~v~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~lelGG~~~~iV~~d 240 (451)
T cd07150 161 IGLKIAEIMEEAGLPKGVFNVVTGGGAEVGDELVDDPRVRMVTFTGSTAVGREIAEKAGRHLKKITLELGGKNPLIVLAD 240 (451)
T ss_pred HHHHHHHHHHHhCCCcCcEEEeeCCCcHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCceEeecCCCCeeEECCC
Confidence 9999999999999999999999984 578889999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHhcccccCCCCCCCcCCCcCHHHHHHHHHHHHHH
Q 001665 458 ASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNA 536 (1035)
Q Consensus 458 ADld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d~~~~~Gpli~~~~~~rl~~~i~~a 536 (1035)
||++.|++.|++++|+|+||.|+++++||||++++ +|+++|+++++.+++|+|.++++++||++++.+++++.++++++
T Consensus 241 adl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a 320 (451)
T cd07150 241 ADLDYAVRAAAFGAFMHQGQICMSASRIIVEEPVYDEFVKKFVARASKLKVGDPRDPDTVIGPLISPRQVERIKRQVEDA 320 (451)
T ss_pred CChHHHHHHHHHHHHhhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999998 99999999999999999999999999999999999999999999
Q ss_pred HHCCCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecCCHHHHHHHHHhcCCCcEEEEEcCCH
Q 001665 537 VDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSG 616 (1035)
Q Consensus 537 v~~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI~laN~~~~GLsasVfS~d~ 616 (1035)
+++|+++++||.. .|.|++||||.++++++.+++||+||||++|++|+|+||||+++|+++|||+++|||+|.
T Consensus 321 ~~~Ga~vl~gg~~-------~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~t~d~ 393 (451)
T cd07150 321 VAKGAKLLTGGKY-------DGNFYQPTVLTDVTPDMRIFREETFGPVTSVIPAKDAEEALELANDTEYGLSAAILTNDL 393 (451)
T ss_pred HhCCCEEEeCCcc-------CCcEEcCEEEeCCCCCCHHHhCCCcCceEEEEEeCCHHHHHHHHhCCCCCCeEEEEeCCH
Confidence 9999999999852 488999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccceeEEEEcCCc----C-CCCCCCCCCCCCCcCcHHHHHhcceeeEEE
Q 001665 617 LAARKFQNEIEARLVGINVPV----P-SSFSSINESGEFNFCGKSGVQFYTQIKTVA 668 (1035)
Q Consensus 617 ~~a~~~a~~l~sG~V~IN~~~----~-~PfGG~g~SG~G~~~G~~g~~~ft~~k~v~ 668 (1035)
+++++++.++++|.|+||+.. . +||||+|.||+|+++|.+|+++||+.|+++
T Consensus 394 ~~~~~~~~~l~~G~v~iN~~~~~~~~~~pfgG~~~SG~G~~~g~~~l~~~~~~k~v~ 450 (451)
T cd07150 394 QRAFKLAERLESGMVHINDPTILDEAHVPFGGVKASGFGREGGEWSMEEFTELKWIT 450 (451)
T ss_pred HHHHHHHHhcCcCEEEECCCCCCCCCCCCcCCccccccCcCCcHHHHHHhheeeEEe
Confidence 999999999999999999863 2 899999999999999999999999999875
|
Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. |
| >cd07128 ALDH_MaoC-N N-terminal domain of the monoamine oxidase C dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-83 Score=763.42 Aligned_cols=460 Identities=23% Similarity=0.297 Sum_probs=415.6
Q ss_pred cceEEcCEEecCCCCCeEEeecCCCCCeEEEecCCCHHHHHHHHHHHHHh-hHhhhCCCHHHHHHHHHHHHHHHHHhHHH
Q 001665 202 VSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRA-FPAWKNTPVATRQRIMFKLQELIRRDIDK 280 (1035)
Q Consensus 202 ~~~~I~G~~~~~~~~~~~~v~nP~tGevi~~v~~~s~~dv~~av~~Ar~A-~~~W~~~s~~~R~~iL~~la~~L~~~~e~ 280 (1035)
+++||||+|+.+. +.+++++||+||+++++++.++ +|+++||++|++| |+.|+.++.++|.++|++++++|++++++
T Consensus 1 ~~~~I~g~~~~~~-~~~~~~~nP~tg~~~~~~~~~~-~dv~~Av~~A~~A~~~~W~~~~~~~Ra~~L~~~a~~l~~~~~~ 78 (513)
T cd07128 1 LQSYVAGQWHAGT-GDGRTLHDAVTGEVVARVSSEG-LDFAAAVAYAREKGGPALRALTFHERAAMLKALAKYLMERKED 78 (513)
T ss_pred CceeECCEEEcCC-CCEEEeECCCCCCEEEEEcCCH-HHHHHHHHHHHHhhhchhhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 3589999999863 5789999999999999999876 8999999999997 79999999999999999999999999999
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhhcC--------ccccCCCCC-Ccceeeecc-ceeEEEECCCCcc
Q 001665 281 LAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIG--------EFVPNALCG-LDTYCFREP-LGVCAGICPFNFP 350 (1035)
Q Consensus 281 La~~i~~etGk~~~eA~~EV~~a~~~l~~~~~~a~~~~g--------~~~~~~~~g-~~~~~~~eP-lGVV~iI~P~N~P 350 (1035)
|+++ +.|+||++.+++.|+..+++.++++++.+....+ +..+....+ ...+++++| +|||++|+|||||
T Consensus 79 la~l-~~e~Gkp~~ea~~Ev~~~~~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~pwN~P 157 (513)
T cd07128 79 LYAL-SAATGATRRDSWIDIDGGIGTLFAYASLGRRELPNAHFLVEGDVEPLSKDGTFVGQHILTPRRGVAVHINAFNFP 157 (513)
T ss_pred HHHH-HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCcccccCCCccccceEEEEecccEEEEECCcccH
Confidence 9996 9999999999999999999999999987765432 111111112 134677999 5999999999999
Q ss_pred hhchHHHHHHHHhcCCEEEEeCCCCChhHHHHHHHHHHHhC-CCCCcEEEeecch-hhHhhhhcCCCccEEEEeccchHH
Q 001665 351 DMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAG-LPDGVLNIVHGTN-DVINHICDDEDIKAISFVASSTAS 428 (1035)
Q Consensus 351 l~~~~~~l~~ALaaGNaVVlKPS~~ap~ta~~L~ell~eAG-lP~gvv~vV~g~~-e~~~~L~~h~~vd~V~fTGS~~vG 428 (1035)
+.++++++++||++||+||+|||+.+|+++.+|++++.++| +|+|+||+|+|+. +.+..| +.+|+|+||||+.+|
T Consensus 158 ~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~eaG~lP~gv~~~v~g~~~~~~~~l---~~~d~v~fTGS~~~G 234 (513)
T cd07128 158 VWGMLEKFAPALLAGVPVIVKPATATAYLTEAVVKDIVESGLLPEGALQLICGSVGDLLDHL---GEQDVVAFTGSAATA 234 (513)
T ss_pred HHHHHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHHhCCCCCCcEEEecCChHHHhccc---CCCCEEEEECCHHHH
Confidence 99999999999999999999999999999999999999999 9999999999854 333333 478999999999999
Q ss_pred HHHHHHH--HhcCCceeecCCCcceEEEcCCCC-----HHHHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHH
Q 001665 429 VQMYARA--AARGKRVQSNRGGKNYAIIMPDAS-----IDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVE 500 (1035)
Q Consensus 429 ~~I~~aA--a~~l~Pv~lElGGknp~IV~~dAD-----ld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~ 500 (1035)
+.|++.+ +++++|+++|||||||+||++||| ++.|++.+++++|.|+||.|++++++||+++++ +|+++|++
T Consensus 235 ~~i~~~a~~a~~~~~~~lElGGknp~IV~~DAd~~~~dld~aa~~iv~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~ 314 (513)
T cd07128 235 AKLRAHPNIVARSIRFNAEADSLNAAILGPDATPGTPEFDLFVKEVAREMTVKAGQKCTAIRRAFVPEARVDAVIEALKA 314 (513)
T ss_pred HHHHHHhhhhccCceEEEeccCcCcEEECCCCCcchhhHHHHHHHHHHHHHHhcCCcccCCceEEEehHHHHHHHHHHHH
Confidence 9999985 488999999999999999999999 999999999999999999999999999999998 99999999
Q ss_pred HHHhcccccCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCcEeeCCcccc---cCCCCCCceeeceEEecCCCC--Ccc
Q 001665 501 LAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIV---VPGYENGNFVGPTILRDVTSN--MEC 575 (1035)
Q Consensus 501 ~~~~lkvG~p~d~~~~~Gpli~~~~~~rl~~~i~~av~~GAkvl~gG~~~~---~p~~~~g~fv~PTIl~~v~~d--~~i 575 (1035)
+++++++|+|.++++++|||+++.+++++.++|++++++ |++++||.... .++...|+|++||||.+++++ +.+
T Consensus 315 ~~~~l~~G~p~~~~~~lGpli~~~~~~~i~~~i~~a~~~-A~vl~GG~~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~~i 393 (513)
T cd07128 315 RLAKVVVGDPRLEGVRMGPLVSREQREDVRAAVATLLAE-AEVVFGGPDRFEVVGADAEKGAFFPPTLLLCDDPDAATAV 393 (513)
T ss_pred HHHhcccCCCccCCCCcCCCCCHHHHHHHHHHHHHHHhC-CEEEECCCccccccCCCCCCCEEECCEEEeccCCcccchH
Confidence 999999999999999999999999999999999999988 99999996421 112246899999999988874 899
Q ss_pred ccccccCcceeEEecCCHHHHHHHHHhcCCCcEEEEEcCCHHHHHHHHhccc--eeEEEEcCCc-------------CCC
Q 001665 576 YKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIE--ARLVGINVPV-------------PSS 640 (1035)
Q Consensus 576 ~~eEiFGPVL~V~~~~d~eeAI~laN~~~~GLsasVfS~d~~~a~~~a~~l~--sG~V~IN~~~-------------~~P 640 (1035)
++||+||||++|++|+|++|||+++|+++|||++||||+|.+.+++++++++ +|.|+||... .+|
T Consensus 394 ~~eE~FGPVl~V~~~~~~deai~~aN~~~~gL~asvft~d~~~~~~~~~~l~~~~G~v~IN~~~~~~~~~~~~~~~~~~p 473 (513)
T cd07128 394 HDVEAFGPVATLMPYDSLAEAIELAARGRGSLVASVVTNDPAFARELVLGAAPYHGRLLVLNRDSAKESTGHGSPLPQLV 473 (513)
T ss_pred HhCCCcCCeEEEEeeCCHHHHHHHHhcCCCCeeEEEEeCCHHHHHHHHHHHHhhCCEEEEcCCccccccccccCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999997 9999999742 289
Q ss_pred CCCCCCCCCCCc-CcHHHHHhcceeeEEE
Q 001665 641 FSSINESGEFNF-CGKSGVQFYTQIKTVA 668 (1035)
Q Consensus 641 fGG~g~SG~G~~-~G~~g~~~ft~~k~v~ 668 (1035)
|||+|.||+|+. +|.+++++|++.|+|.
T Consensus 474 fGG~k~SG~G~~~gg~~~l~~~~~~k~v~ 502 (513)
T cd07128 474 HGGPGRAGGGEELGGLRGVKHYMQRTAVQ 502 (513)
T ss_pred CCCcccCCCCcccccHHHHHHhheeeeee
Confidence 999999999999 5799999999999975
|
The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH. |
| >cd07118 ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-83 Score=758.14 Aligned_cols=444 Identities=31% Similarity=0.447 Sum_probs=418.7
Q ss_pred ecCCCCCeEEEecCCCHHHHHHHHHHHHHhhHh--hhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHH
Q 001665 222 INPATQEVGSQVPLTTYEEFKDAVDAAKRAFPA--WKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRD 299 (1035)
Q Consensus 222 ~nP~tGevi~~v~~~s~~dv~~av~~Ar~A~~~--W~~~s~~~R~~iL~~la~~L~~~~e~La~~i~~etGk~~~eA~~E 299 (1035)
+||+||+++++++.++.+|++++|+.|++||+. |+.++.++|.++|++++++|++++++|++++++|+||++.+++.|
T Consensus 2 ~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~e 81 (454)
T cd07118 2 RSPAHGVVVARYAEGTVEDVDAAVAAARKAFDKGPWPRMSGAERAAVLLKVADLIRARRERLALIETLESGKPISQARGE 81 (454)
T ss_pred CCCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHH
Confidence 589999999999999999999999999999985 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhcCccccCCCCCCcceeeeccceeEEEECCCCcchhchHHHHHHHHhcCCEEEEeCCCCChhH
Q 001665 300 VLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGT 379 (1035)
Q Consensus 300 V~~a~~~l~~~~~~a~~~~g~~~~~~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~ALaaGNaVVlKPS~~ap~t 379 (1035)
+..+++.+++++....+..+........+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.+
T Consensus 82 v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~i~~ALaaGN~Vi~Kps~~~p~~ 161 (454)
T cd07118 82 IEGAADLWRYAASLARTLHGDSYNNLGDDMLGLVLREPIGVVGIITPWNFPFLILSQKLPFALAAGCTVVVKPSEFTSGT 161 (454)
T ss_pred HHHHHHHHHHHHHHHHHhcCcccccCCCCceeeEEeecceEEEEECCCCcHHHHHHHHHHHHHhcCCEEEEECCCCCcHH
Confidence 99999999999887766655433322233456788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCCCcEEEeecch-hhHhhhhcCCCccEEEEeccchHHHHHHHHHHhcCCceeecCCCcceEEEcCCC
Q 001665 380 SMILAALAMEAGLPDGVLNIVHGTN-DVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMPDA 458 (1035)
Q Consensus 380 a~~L~ell~eAGlP~gvv~vV~g~~-e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~l~Pv~lElGGknp~IV~~dA 458 (1035)
+.+|+++|.++|+|+|+|++|+|+. +.+..|+.|+++++|+||||+.+|+.|++.++.+++|+++|+|||||+||++||
T Consensus 162 ~~~l~~~~~~aG~P~g~~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lelgG~n~~iV~~dA 241 (454)
T cd07118 162 TLMLAELLIEAGLPAGVVNIVTGYGATVGQAMTEHPDVDMVSFTGSTRVGKAIAAAAARNLKKVSLELGGKNPQIVFADA 241 (454)
T ss_pred HHHHHHHHHhcCCCccceEEEecCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEeccCCCCceEECCCC
Confidence 9999999999999999999999865 588999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHhcccccCCCCCCCcCCCcCHHHHHHHHHHHHHHH
Q 001665 459 SIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAV 537 (1035)
Q Consensus 459 Dld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d~~~~~Gpli~~~~~~rl~~~i~~av 537 (1035)
|++.|++.|++++|+++||.|+++++|||+++++ +|+++|+++++++++|+|.++++++||++++.+++++.++|++++
T Consensus 242 dl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~ 321 (454)
T cd07118 242 DLDAAADAVVFGVYFNAGECCNSGSRLLVHESIADAFVAAVVARSRKVRVGDPLDPETKVGAIINEAQLAKITDYVDAGR 321 (454)
T ss_pred CHHHHHHHHHHHHHhccCCCCCCCceEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCcCCCCcCHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999998 999999999999999999999999999999999999999999999
Q ss_pred HCCCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecCCHHHHHHHHHhcCCCcEEEEEcCCHH
Q 001665 538 DNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGL 617 (1035)
Q Consensus 538 ~~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI~laN~~~~GLsasVfS~d~~ 617 (1035)
++|+++++||.... ...|+|++|||+.++++++.+++||+||||++|++|+|++|||+++|+++|||+++|||+|.+
T Consensus 322 ~~ga~v~~gg~~~~---~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~vft~d~~ 398 (454)
T cd07118 322 AEGATLLLGGERLA---SAAGLFYQPTIFTDVTPDMAIAREEIFGPVLSVLTFDTVDEAIALANDTVYGLSAGVWSKDID 398 (454)
T ss_pred hCCCEEEeCCCCCC---CCCCeEEeCEEEeCCCCCCHHHhCCCCCceEEEEEECCHHHHHHHHhCCCccceEEEECCCHH
Confidence 99999999997521 136899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhccceeEEEEcCCcC----CCCCCCCCCCCCCcCcHHHHHhcceeeEEE
Q 001665 618 AARKFQNEIEARLVGINVPVP----SSFSSINESGEFNFCGKSGVQFYTQIKTVA 668 (1035)
Q Consensus 618 ~a~~~a~~l~sG~V~IN~~~~----~PfGG~g~SG~G~~~G~~g~~~ft~~k~v~ 668 (1035)
.+++++.++++|.|+||+... +||||+|.||+|+++|++++++||+.|+++
T Consensus 399 ~~~~~~~~l~~g~v~iN~~~~~~~~~PfgG~~~SG~G~~~g~~~l~~~t~~k~~~ 453 (454)
T cd07118 399 TALTVARRIRAGTVWVNTFLDGSPELPFGGFKQSGIGRELGRYGVEEYTELKTVH 453 (454)
T ss_pred HHHHHHHhcCcCEEEECCCCCCCCCCCcCCcccccCCcCchHHHHHHHhceeEEe
Confidence 999999999999999998642 899999999999999999999999999874
|
Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. |
| >cd07115 ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-83 Score=755.96 Aligned_cols=443 Identities=33% Similarity=0.471 Sum_probs=418.5
Q ss_pred ecCCCCCeEEEecCCCHHHHHHHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHH
Q 001665 222 INPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQ-RDV 300 (1035)
Q Consensus 222 ~nP~tGevi~~v~~~s~~dv~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e~La~~i~~etGk~~~eA~-~EV 300 (1035)
+||+||+++++++.++.++++++++.|++||+.|+.++.++|.++|++++++|++++++|++++++|+||+..+++ .|+
T Consensus 2 ~~P~t~~~i~~~~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~ev 81 (453)
T cd07115 2 LNPATGELIARVAQASAEDVDAAVAAARAAFEAWSAMDPAERGRILWRLAELILANADELARLESLDTGKPIRAARRLDV 81 (453)
T ss_pred CCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 5999999999999999999999999999999999999999999999999999999999999999999999999997 499
Q ss_pred HHHHHHHHHHHHHHHhhcCccccCCCCCCcceeeeccceeEEEECCCCcchhchHHHHHHHHhcCCEEEEeCCCCChhHH
Q 001665 301 LFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTS 380 (1035)
Q Consensus 301 ~~a~~~l~~~~~~a~~~~g~~~~~~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~ALaaGNaVVlKPS~~ap~ta 380 (1035)
..+++.+++++.++....+...+. ..+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++
T Consensus 82 ~~~i~~l~~~~~~~~~~~g~~~~~-~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~ 160 (453)
T cd07115 82 PRAADTFRYYAGWADKIEGEVIPV-RGPFLNYTVREPVGVVGAIVPWNFPLMFAAWKVAPALAAGNTVVLKPAELTPLSA 160 (453)
T ss_pred HHHHHHHHHHHHHHHHhcCceecC-CCCceEEEEecceeEEEEEcCCCCHHHHHHHHHHHHHhcCCEEEEECCCCCcHHH
Confidence 999999999988766655543322 2344568899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCCcEEEeecc-hhhHhhhhcCCCccEEEEeccchHHHHHHHHHHhcCCceeecCCCcceEEEcCCCC
Q 001665 381 MILAALAMEAGLPDGVLNIVHGT-NDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMPDAS 459 (1035)
Q Consensus 381 ~~L~ell~eAGlP~gvv~vV~g~-~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~l~Pv~lElGGknp~IV~~dAD 459 (1035)
..|+++|.++|+|+|++++|+|+ .+.++.|+.|+++|+|+||||+.+|+.|++.++++++|+++|+|||||+||++|||
T Consensus 161 ~~l~~~~~~aGlP~~~~~~v~g~~~~~~~~l~~~~~id~v~fTGs~~~g~~v~~~aa~~~~~~~lElgG~~p~iV~~dAd 240 (453)
T cd07115 161 LRIAELMAEAGFPAGVLNVVTGFGEVAGAALVEHPDVDKITFTGSTAVGRKIMQGAAGNLKRVSLELGGKSANIVFADAD 240 (453)
T ss_pred HHHHHHHHhcCcCchheEEEecCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCeEEEecCCCCceEECCCCC
Confidence 99999999999999999999985 46788999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHhcccccCCCCCCCcCCCcCHHHHHHHHHHHHHHHH
Q 001665 460 IDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVD 538 (1035)
Q Consensus 460 ld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d~~~~~Gpli~~~~~~rl~~~i~~av~ 538 (1035)
++.|++.|++++|+|+||.|+++++|||+++++ +|+++|+++++++++|+|.++++++||++++.+++++.++|+++++
T Consensus 241 l~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~ 320 (453)
T cd07115 241 LDAAVRAAATGIFYNQGQMCTAGSRLLVHESIYDEFLERFTSLARSLRPGDPLDPKTQMGPLVSQAQFDRVLDYVDVGRE 320 (453)
T ss_pred HHHHHHHHHHHHHhccCCCCCCCeEEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999998 9999999999999999999999999999999999999999999999
Q ss_pred CCCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecCCHHHHHHHHHhcCCCcEEEEEcCCHHH
Q 001665 539 NGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLA 618 (1035)
Q Consensus 539 ~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI~laN~~~~GLsasVfS~d~~~ 618 (1035)
+|+++++||... ...|+|++|||+.++++++.+++||+||||++|++|+|+||||+++|+.+|||++||||+|.+.
T Consensus 321 ~Ga~v~~gg~~~----~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~ifs~d~~~ 396 (453)
T cd07115 321 EGARLLTGGKRP----GARGFFVEPTIFAAVPPEMRIAQEEIFGPVVSVMRFRDEEEALRIANGTEYGLAAGVWTRDLGR 396 (453)
T ss_pred CCCEEEeCCCCC----CCCCceECCEEEecCCCCChHhhCCCcCceEEEEeeCCHHHHHHHHhCCCCCCeEEEECCCHHH
Confidence 999999998642 1368999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhccceeEEEEcCCcC----CCCCCCCCCCCCCcCcHHHHHhcceeeEEEE
Q 001665 619 ARKFQNEIEARLVGINVPVP----SSFSSINESGEFNFCGKSGVQFYTQIKTVAQ 669 (1035)
Q Consensus 619 a~~~a~~l~sG~V~IN~~~~----~PfGG~g~SG~G~~~G~~g~~~ft~~k~v~~ 669 (1035)
+++++.++++|+|+||+... +||||+|.||+|+++|.+|+++|++.|++++
T Consensus 397 ~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~~~~ 451 (453)
T cd07115 397 AHRVAAALKAGTVWINTYNRFDPGSPFGGYKQSGFGREMGREALDEYTEVKSVWV 451 (453)
T ss_pred HHHHHHhcCccEEEECCCCCCCCCCCCCCcccccCCcCchHHHHHHhhceEEEEE
Confidence 99999999999999997632 8999999999999999999999999999865
|
4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. |
| >cd07106 ALDH_AldA-AAD23400 Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-83 Score=754.73 Aligned_cols=440 Identities=33% Similarity=0.477 Sum_probs=415.7
Q ss_pred eecCCCCCeEEEecCCCHHHHHHHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHH
Q 001665 221 VINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDV 300 (1035)
Q Consensus 221 v~nP~tGevi~~v~~~s~~dv~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e~La~~i~~etGk~~~eA~~EV 300 (1035)
++||+||+++++++.++.+|+++++++|++||+.|+.++.++|.++|++++++|+++.++|++++++|+||+..+++.|+
T Consensus 1 ~~~P~tg~~~~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ev 80 (446)
T cd07106 1 VINPATGEVFASAPVASEAQLDQAVAAAKAAFPGWSATPLEERRAALLAIADAIEANAEELARLLTLEQGKPLAEAQFEV 80 (446)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhcCccccCCCCCCcceeeeccceeEEEECCCCcchhchHHHHHHHHhcCCEEEEeCCCCChhHH
Q 001665 301 LFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTS 380 (1035)
Q Consensus 301 ~~a~~~l~~~~~~a~~~~g~~~~~~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~ALaaGNaVVlKPS~~ap~ta 380 (1035)
..+++.++++++... .+..... ..+...+.+++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++
T Consensus 81 ~~~~~~l~~~~~~~~--~~~~~~~-~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~~~ 157 (446)
T cd07106 81 GGAVAWLRYTASLDL--PDEVIED-DDTRRVELRRKPLGVVAAIVPWNFPLLLAAWKIAPALLAGNTVVLKPSPFTPLCT 157 (446)
T ss_pred HHHHHHHHHHHhhhh--cCccccC-CCCceEEEEEEcceEEEEEcCCChHHHHHHHHHHHHHHcCCEEEEECCccchHHH
Confidence 999999998877652 2222221 2345678899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCCcEEEeecchhhHhhhhcCCCccEEEEeccchHHHHHHHHHHhcCCceeecCCCcceEEEcCCCCH
Q 001665 381 MILAALAMEAGLPDGVLNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMPDASI 460 (1035)
Q Consensus 381 ~~L~ell~eAGlP~gvv~vV~g~~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~l~Pv~lElGGknp~IV~~dADl 460 (1035)
.++++++.++ +|+|++++|+|+.+.+..|+.|+++|+|+||||+.+|+.|+++++++++|+++|+|||||+||++|||+
T Consensus 158 ~~l~~~~~~~-lP~g~~~~v~g~~~~~~~l~~~~~vd~V~fTGs~~~g~~v~~~aa~~~~~~~lElGG~~p~iV~~dADl 236 (446)
T cd07106 158 LKLGELAQEV-LPPGVLNVVSGGDELGPALTSHPDIRKISFTGSTATGKKVMASAAKTLKRVTLELGGNDAAIVLPDVDI 236 (446)
T ss_pred HHHHHHHHHh-CCcCeEEEeeCChhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeeEEecCCCCeeEECCCCCH
Confidence 9999999996 999999999997788899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHhcccccCCCCCCCcCCCcCHHHHHHHHHHHHHHHHC
Q 001665 461 DATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDN 539 (1035)
Q Consensus 461 d~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d~~~~~Gpli~~~~~~rl~~~i~~av~~ 539 (1035)
+.|++.|++++|+|+||.|+++++|||+++++ +|+++|+++++++++|+|.++++++||++++.+++++.+++++++.+
T Consensus 237 ~~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~i~~~i~~a~~~ 316 (446)
T cd07106 237 DAVAPKLFWGAFINSGQVCAAIKRLYVHESIYDEFCEALVALAKAAVVGDGLDPGTTLGPVQNKMQYDKVKELVEDAKAK 316 (446)
T ss_pred HHHHHHHHHHHHHhcCCCCCCCcEEEEccccHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC
Confidence 99999999999999999999999999999998 99999999999999999999999999999999999999999999999
Q ss_pred CCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecCCHHHHHHHHHhcCCCcEEEEEcCCHHHH
Q 001665 540 GASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAA 619 (1035)
Q Consensus 540 GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI~laN~~~~GLsasVfS~d~~~a 619 (1035)
|+++++||... ...|+|++||||.++++++.+++||+||||++|++|+|++|||+++|+.+|||++||||+|.+++
T Consensus 317 ga~~~~gg~~~----~~~g~~~~Ptvl~~v~~~~~i~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~ 392 (446)
T cd07106 317 GAKVLAGGEPL----DGPGYFIPPTIVDDPPEGSRIVDEEQFGPVLPVLKYSDEDEVIARANDSEYGLGASVWSSDLERA 392 (446)
T ss_pred CCEEEeCCCcC----CCCCeeEcCEEEeCCCCCCHHHhcCccCCeEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHH
Confidence 99999999742 13689999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhccceeEEEEcCCcC----CCCCCCCCCCCCCcCcHHHHHhcceeeEEE
Q 001665 620 RKFQNEIEARLVGINVPVP----SSFSSINESGEFNFCGKSGVQFYTQIKTVA 668 (1035)
Q Consensus 620 ~~~a~~l~sG~V~IN~~~~----~PfGG~g~SG~G~~~G~~g~~~ft~~k~v~ 668 (1035)
++++.++++|.|+||+... +||||+|.||+|++||.+|+++||+.|++.
T Consensus 393 ~~~~~~~~~G~v~iN~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~t~~k~v~ 445 (446)
T cd07106 393 EAVARRLEAGTVWINTHGALDPDAPFGGHKQSGIGVEFGIEGLKEYTQTQVIN 445 (446)
T ss_pred HHHHHhCCccEEEECCCCCCCCCCCCCCccccccCccchHHHHHHhhceeEEe
Confidence 9999999999999998642 899999999999999999999999999875
|
Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. |
| >PRK09407 gabD2 succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-83 Score=765.49 Aligned_cols=465 Identities=27% Similarity=0.372 Sum_probs=428.7
Q ss_pred CccceEEcCEEecCCCCCeEEeecCCCCCeEEEecCCCHHHHHHHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHHhHH
Q 001665 200 NRVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDID 279 (1035)
Q Consensus 200 ~~~~~~I~G~~~~~~~~~~~~v~nP~tGevi~~v~~~s~~dv~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e 279 (1035)
..+.+.|.|.+ +.++..++++||+||+++++++.++.+|+++++++|++||+.|+.++.++|.++|++++++|+++.+
T Consensus 17 ~~~~~~~~~~~--~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ 94 (524)
T PRK09407 17 ERLRRLTARVD--GAAGPTREVTAPFTGEPLATVPVSTAADVEAAFARARAAQRAWAATPVRERAAVLLRFHDLVLENRE 94 (524)
T ss_pred HHHHHHHhhcC--CCCCCEEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHH
Confidence 34556666655 3456789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCcc-ccCCCC-CCcceeeeccceeEEEECCCCcchhchHHH
Q 001665 280 KLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEF-VPNALC-GLDTYCFREPLGVCAGICPFNFPDMTPLWM 357 (1035)
Q Consensus 280 ~La~~i~~etGk~~~eA~~EV~~a~~~l~~~~~~a~~~~g~~-~~~~~~-g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~ 357 (1035)
+|++++++|+||+..++..|+..++..+++++..+....+.. ...... ....+.+++|+|||++|+|||||+.+.+++
T Consensus 95 ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~Pl~~~~~~ 174 (524)
T PRK09407 95 ELLDLVQLETGKARRHAFEEVLDVALTARYYARRAPKLLAPRRRAGALPVLTKTTELRQPKGVVGVISPWNYPLTLAVSD 174 (524)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccccCCCCceEEEEEecceEEEEEeCCCChHHHHHHH
Confidence 999999999999999999999999999999888765543322 111111 235678899999999999999999999999
Q ss_pred HHHHHhcCCEEEEeCCCCChhHHHHHHHHHHHhCCCCCcEEEeecc-hhhHhhhhcCCCccEEEEeccchHHHHHHHHHH
Q 001665 358 FSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGT-NDVINHICDDEDIKAISFVASSTASVQMYARAA 436 (1035)
Q Consensus 358 l~~ALaaGNaVVlKPS~~ap~ta~~L~ell~eAGlP~gvv~vV~g~-~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa 436 (1035)
+++||++||+||+|||+.+|.++..|+++|.++|+|+|+||+|+|+ .+.+..|+.| +++|+||||+.+|+.|++.++
T Consensus 175 ~~~ALaaGN~VIlKPs~~tp~~~~~l~~ll~eaGlP~gvv~~v~g~~~~~~~~L~~~--~d~V~fTGs~~~g~~v~~~aa 252 (524)
T PRK09407 175 AIPALLAGNAVVLKPDSQTPLTALAAVELLYEAGLPRDLWQVVTGPGPVVGTALVDN--ADYLMFTGSTATGRVLAEQAG 252 (524)
T ss_pred HHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHcCCCcccEEEEecCCchHHHHHHhc--CCEEEEECCHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999995 4678889875 789999999999999999999
Q ss_pred hcCCceeecCCCcceEEEcCCCCHHHHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHhcccccCCCCCC
Q 001665 437 ARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDASA 515 (1035)
Q Consensus 437 ~~l~Pv~lElGGknp~IV~~dADld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d~~~ 515 (1035)
++++|+++|+|||||+||++|||++.|++.|++++|.|+||.|+++++||||++++ +|+++|+++++++++|+|.++++
T Consensus 253 ~~~~~v~lElGGknp~iV~~dADl~~Aa~~i~~~~f~~sGQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~ 332 (524)
T PRK09407 253 RRLIGFSLELGGKNPMIVLDDADLDKAAAGAVRACFSNAGQLCISIERIYVHESIYDEFVRAFVAAVRAMRLGAGYDYSA 332 (524)
T ss_pred hcCCcEEEECCCCceeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCcCC
Confidence 99999999999999999999999999999999999999999999999999999998 99999999999999999999999
Q ss_pred CcCCCcCHHHHHHHHHHHHHHHHCCCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecCCHHH
Q 001665 516 DVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEE 595 (1035)
Q Consensus 516 ~~Gpli~~~~~~rl~~~i~~av~~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~ee 595 (1035)
++||++++.+++++.+++++++++||++++||... + ...|+|++|||+.+++++|.+++||+||||++|++|+|+||
T Consensus 333 ~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~--~-~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~de 409 (524)
T PRK09407 333 DMGSLISEAQLETVSAHVDDAVAKGATVLAGGKAR--P-DLGPLFYEPTVLTGVTPDMELAREETFGPVVSVYPVADVDE 409 (524)
T ss_pred ccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccC--C-CCCCceEeCEEEeCCCCCChHHhCCCCCCeEEEEeeCCHHH
Confidence 99999999999999999999999999999998631 1 12579999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCcEEEEEcCCHHHHHHHHhccceeEEEEcCCc------C-CCCCCCCCCCCCCcCcHHHHHhcceeeEEE
Q 001665 596 AIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPV------P-SSFSSINESGEFNFCGKSGVQFYTQIKTVA 668 (1035)
Q Consensus 596 AI~laN~~~~GLsasVfS~d~~~a~~~a~~l~sG~V~IN~~~------~-~PfGG~g~SG~G~~~G~~g~~~ft~~k~v~ 668 (1035)
||+++|+++|||++||||+|.+++.++++++++|.|+||+.. . +||||+|.||+|+++|.+|+++||+.|+|+
T Consensus 410 ai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~v~IN~~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~ft~~k~v~ 489 (524)
T PRK09407 410 AVERANDTPYGLNASVWTGDTARGRAIAARIRAGTVNVNEGYAAAWGSVDAPMGGMKDSGLGRRHGAEGLLKYTESQTIA 489 (524)
T ss_pred HHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCcCcCCCCCCCCCccccccCccchHHHHHHhCCeEEEE
Confidence 999999999999999999999999999999999999999852 1 799999999999999999999999999998
Q ss_pred Eec
Q 001665 669 QQW 671 (1035)
Q Consensus 669 ~~~ 671 (1035)
..+
T Consensus 490 ~~~ 492 (524)
T PRK09407 490 TQR 492 (524)
T ss_pred Ecc
Confidence 763
|
|
| >PF00171 Aldedh: Aldehyde dehydrogenase family; InterPro: IPR015590 Aldehyde dehydrogenases (1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-84 Score=764.64 Aligned_cols=455 Identities=37% Similarity=0.548 Sum_probs=426.0
Q ss_pred EecCCCCCeEEeecCCCCCeEEEecCCCHHHHHHHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh
Q 001665 210 FVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQ 289 (1035)
Q Consensus 210 ~~~~~~~~~~~v~nP~tGevi~~v~~~s~~dv~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e~La~~i~~et 289 (1035)
|+.+.+ ++++++||.||+++++++.++.+|+++++++|++||+.|+.++..+|.++|++++++|+++.++|++++++|+
T Consensus 1 w~~~~~-~~~~v~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~ 79 (462)
T PF00171_consen 1 WVSSES-ETFDVINPATGEVIGEVPSATAEDVDRAVEAARAAFKEWSKLPAAERARILERFADLLEERRDELAELIALET 79 (462)
T ss_dssp EEE-TS-SEEEEEETTTECEEEEEEEBSHHHHHHHHHHHHHHHHHHTTSSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CcCCCC-CEEcCCCCCCcCEEEEEcCCCHHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHHhhccccccccccccc
Confidence 676654 6799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHhhcCccccCCCCCCcceeeeccceeEEEECCCCcchhchHHHHHHHHhcCCEEE
Q 001665 290 GTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFI 369 (1035)
Q Consensus 290 Gk~~~eA~~EV~~a~~~l~~~~~~a~~~~g~~~~~~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~ALaaGNaVV 369 (1035)
||++.+++.|+..+++.++++++.+....++.++. ..+...+.+++|+|||++|+|||||+.++++++++||++||+||
T Consensus 80 Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VV 158 (462)
T PF00171_consen 80 GKPIAEARGEVDRAIDFLRYYADAARKLAGEVLPS-DPGSRNYTRREPLGVVLIITPWNFPLYLAVWKIAPALAAGNTVV 158 (462)
T ss_dssp TSSHHHHHHHHHHHHHHHHHHHHHHHHHTEEEEEE-STTEEEEEEEEE-SEEEEEE-SSSCTHHHHHHHHHHHHTT-EEE
T ss_pred ccccccccchhhhhhhhhhhhhhcccceehhhccc-ccccccccccccccceeecccccccccccccchhhhhcccccce
Confidence 99999999999999999999999888766654444 36677889999999999999999999999999999999999999
Q ss_pred EeCCCCChhHHHHHHHHHHHhCCCCCcEEEeec-chhhHhhhhcCCCccEEEEeccchHHHHHHHHHHhcCCceeecCCC
Q 001665 370 LKPSEKNPGTSMILAALAMEAGLPDGVLNIVHG-TNDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGG 448 (1035)
Q Consensus 370 lKPS~~ap~ta~~L~ell~eAGlP~gvv~vV~g-~~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~l~Pv~lElGG 448 (1035)
+|||+.+|.++.+|++++.++|+|+|++|+|+| +.+.+..|+.|+++++|+||||..+|+.|++.++++++|+++|+||
T Consensus 159 lkps~~~~~~~~~l~~~~~~AglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~v~lelgG 238 (462)
T PF00171_consen 159 LKPSEQAPLTALLLAELLEEAGLPPGVVNVVPGDGSEVGEALVSHPDVDLVSFTGSTATGRAIAKAAAKNLKPVVLELGG 238 (462)
T ss_dssp EEEBTTSHHHHHHHHHHHHHHTSTTTSEEEECSSTHHHHHHHHHTTTEEEEEEESEHHHHHHHHHHHHTTTSEEEEEECE
T ss_pred eeeccccccccccchhhccccccccccccccccccccccceeeeccccceeeecchhhhhhhhhhhcccccccccccccc
Confidence 999999999999999999999999999999999 5688999999999999999999999999999999999999999999
Q ss_pred cceEEEcCCCCHHHHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHhcccccCCCCCCCcCCCcCHHHHH
Q 001665 449 KNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDASADVGPVVSVEVKD 527 (1035)
Q Consensus 449 knp~IV~~dADld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d~~~~~Gpli~~~~~~ 527 (1035)
|||+||++|||++.|++.|++++|+|+||.|+++++|||+++++ +|+++|+++++++++|+|.++++++||+++..+++
T Consensus 239 ~~p~iV~~daDld~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~~~~~~gpl~~~~~~~ 318 (462)
T PF00171_consen 239 KNPVIVDPDADLDKAAEAIVRGAFFNSGQSCTAPSRVLVHESIYDEFVEALKERVAKLRVGDPLDESTDVGPLISKAQRE 318 (462)
T ss_dssp EEEEEE-TTSHHHHHHHHHHHHHHGGGGTSTTSEEEEEEEHHHHHHHHHHHHHHHHTSEBSSTTSTTCSBCHCSSHHHHH
T ss_pred cceeeEecccccccccccccchhcccccccccccccccccccccchhhhhhhhccccccccCCccccccccccccchhhh
Confidence 99999999999999999999999999999999999999999998 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHCCCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecCCHHHHHHHHHhcCCCc
Q 001665 528 QISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVN 607 (1035)
Q Consensus 528 rl~~~i~~av~~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI~laN~~~~GL 607 (1035)
++.+++++++++||++++||. ........|+|++|||+.++.++|.+++||+||||++|++|+|++|||+++|+.+|||
T Consensus 319 ~~~~~i~~a~~~ga~v~~gg~-~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl 397 (462)
T PF00171_consen 319 RVKALIEDAVAEGAKVLCGGE-PQEADPENGFFIPPTVLEDVPPDMPIMQEEIFGPVLPVVPYDDLDEAIALANDSEYGL 397 (462)
T ss_dssp HHHHHHHHHHHTTSEEEEETS-SSSBCSSSSTEEEEEEEESEHTTSHHHHSC-SSSEEEEEEESSHHHHHHHHHHSSEES
T ss_pred hcccccccccccccccccccc-cccccccccccccccccccccccccccccccccccceecccccchhhhhcccccCCCc
Confidence 999999999999999999994 1122346899999999999999999999999999999999999999999999999999
Q ss_pred EEEEEcCCHHHHHHHHhccceeEEEEcCCcC-----CCCCCCCCCCCCCcCcHHHHHhcceeeEE
Q 001665 608 GASIFTSSGLAARKFQNEIEARLVGINVPVP-----SSFSSINESGEFNFCGKSGVQFYTQIKTV 667 (1035)
Q Consensus 608 sasVfS~d~~~a~~~a~~l~sG~V~IN~~~~-----~PfGG~g~SG~G~~~G~~g~~~ft~~k~v 667 (1035)
+++|||+|..++++++.++++|+|+||++.. +||||+|.||+|+++|.+|+++|++.|+|
T Consensus 398 ~a~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~~~SG~G~~~g~~~l~~~~~~k~V 462 (462)
T PF00171_consen 398 TASVFSRDESRAERLARRLEAGRVWINDPPTGDPDGLPFGGFKQSGIGREGGPEGLDEFTQIKTV 462 (462)
T ss_dssp EEEEECSBHHHHHHHHHHSTSSEEEESSSSTGGTTSSEBE-SGGGEESEBSHHHHHHGTEEEEEE
T ss_pred eeEEecccccccccccccccccceeecCCcccccccCCCCCcccccCCcchHHHHHHHhCCccCC
Confidence 9999999999999999999999999998742 59999999999999999999999999986
|
2.1.3 from EC and 1.2.1.5 from EC) are enzymes that oxidize a wide variety of aliphatic and aromatic aldehydes using NADP as a cofactor. In mammals at least four different forms of the enzyme are known []: class-1 (or Ald C) a tetrameric cytosolic enzyme, class-2 (or Ald M) a tetrameric mitochondrial enzyme, class- 3 (or Ald D) a dimeric cytosolic enzyme, and class IV a microsomal enzyme. Aldehyde dehydrogenases have also been sequenced from fungal and bacterial species. A number of enzymes are known to be evolutionary related to aldehyde dehydrogenases. A glutamic acid and a cysteine residue have been implicated in the catalytic activity of mammalian aldehyde dehydrogenase. These residues are conserved in all the enzymes of this entry. Some of the proteins in this entry are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Alt a 10 and Cla h 3.; GO: 0016491 oxidoreductase activity, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 3R31_A 3HAZ_A 1UXQ_A 1UXP_A 1UXR_A 1UXU_A 1UXN_A 1KY8_A 1UXT_A 1UXV_A .... |
| >cd07102 ALDH_EDX86601 Uncharacterized aldehyde dehydrogenase of Synechococcus sp | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-83 Score=752.78 Aligned_cols=446 Identities=28% Similarity=0.415 Sum_probs=418.9
Q ss_pred ecCCCCCeEEEecCCCHHHHHHHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHH
Q 001665 222 INPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVL 301 (1035)
Q Consensus 222 ~nP~tGevi~~v~~~s~~dv~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e~La~~i~~etGk~~~eA~~EV~ 301 (1035)
+||+||+++++++.++.++++++++.|++||+.|+.++.++|.++|++++++|+++.++|++++++|+||+..+++.|+.
T Consensus 1 ~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~ev~ 80 (452)
T cd07102 1 ISPIDGSVIAERPLASLEAVRAALERARAAQKGWRAVPLEERKAIVTRAVELLAANTDEIAEELTWQMGRPIAQAGGEIR 80 (452)
T ss_pred CCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHHHHHHHH
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhcCccccCCCCCCcceeeeccceeEEEECCCCcchhchHHHHHHHHhcCCEEEEeCCCCChhHHH
Q 001665 302 FGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSM 381 (1035)
Q Consensus 302 ~a~~~l~~~~~~a~~~~g~~~~~~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~ALaaGNaVVlKPS~~ap~ta~ 381 (1035)
.+++.+++++..+....+........+...+.+++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~ 160 (452)
T cd07102 81 GMLERARYMISIAEEALADIRVPEKDGFERYIRREPLGVVLIIAPWNYPYLTAVNAVIPALLAGNAVILKHSPQTPLCGE 160 (452)
T ss_pred HHHHHHHHHHHHHHHhcCCcccCCCCCeeEEEEEEeccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHH
Confidence 99999999887766443332222223445678899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCcEEEeecchhhHhhhhcCCCccEEEEeccchHHHHHHHHHHhcCCceeecCCCcceEEEcCCCCHH
Q 001665 382 ILAALAMEAGLPDGVLNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMPDASID 461 (1035)
Q Consensus 382 ~L~ell~eAGlP~gvv~vV~g~~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~l~Pv~lElGGknp~IV~~dADld 461 (1035)
.|+++|.++|+|+|++|+|+|+.+.+..|+.|++|++|+||||+.+|+.|++++++.++|+.+|+|||||+||++|||++
T Consensus 161 ~l~~~l~~aGlP~g~~~~v~g~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a~~~~~~v~lelgG~~~~iV~~dADl~ 240 (452)
T cd07102 161 RFAAAFAEAGLPEGVFQVLHLSHETSAALIADPRIDHVSFTGSVAGGRAIQRAAAGRFIKVGLELGGKDPAYVRPDADLD 240 (452)
T ss_pred HHHHHHHhcCCCcCcEEEEeCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEEECCCCCceEEcCCCCHH
Confidence 99999999999999999999977888999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHhcccccCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCC
Q 001665 462 ATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNG 540 (1035)
Q Consensus 462 ~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d~~~~~Gpli~~~~~~rl~~~i~~av~~G 540 (1035)
.|++.+++++|+++||.|+++++|||+++++ +|+++|+++++++++|+|.++++++||++++.+++++.+++++++++|
T Consensus 241 ~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~L~~~~~~l~vg~p~~~~~~~gpli~~~~~~~i~~~i~~a~~~g 320 (452)
T cd07102 241 AAAESLVDGAFFNSGQSCCSIERIYVHESIYDAFVEAFVAVVKGYKLGDPLDPSTTLGPVVSARAADFVRAQIADAIAKG 320 (452)
T ss_pred HHHHHHHHHHHHhCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999999999999999998 999999999999999999999999999999999999999999999999
Q ss_pred CcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecCCHHHHHHHHHhcCCCcEEEEEcCCHHHHH
Q 001665 541 ASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAAR 620 (1035)
Q Consensus 541 Akvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI~laN~~~~GLsasVfS~d~~~a~ 620 (1035)
+++++||.....+ +..|.|++|||+.+++++|.+++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.
T Consensus 321 a~vl~gg~~~~~~-~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~ 399 (452)
T cd07102 321 ARALIDGALFPED-KAGGAYLAPTVLTNVDHSMRVMREETFGPVVGIMKVKSDAEAIALMNDSEYGLTASVWTKDIARAE 399 (452)
T ss_pred CEEEeCCCCCCCC-CCCCceEcCEEEecCCCCChhhhcCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHH
Confidence 9999998753211 246899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhccceeEEEEcCCcC----CCCCCCCCCCCCCcCcHHHHHhcceeeEEE
Q 001665 621 KFQNEIEARLVGINVPVP----SSFSSINESGEFNFCGKSGVQFYTQIKTVA 668 (1035)
Q Consensus 621 ~~a~~l~sG~V~IN~~~~----~PfGG~g~SG~G~~~G~~g~~~ft~~k~v~ 668 (1035)
++++++++|.|+||++.. +||||+|.||+|+++|.+|+++||+.|+++
T Consensus 400 ~~~~~l~~G~v~iN~~~~~~~~~pfgG~k~SG~G~~~g~~~~~~~~~~k~~~ 451 (452)
T cd07102 400 ALGEQLETGTVFMNRCDYLDPALAWTGVKDSGRGVTLSRLGYDQLTRPKSYH 451 (452)
T ss_pred HHHHHcCcceEEECCCCCCCCCCCCCCccccccCccchHHHHHHHhceeEEe
Confidence 999999999999998632 899999999999999999999999999975
|
PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. |
| >cd07112 ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-83 Score=754.06 Aligned_cols=449 Identities=31% Similarity=0.442 Sum_probs=420.5
Q ss_pred CeEEeecCCCCCeEEEecCCCHHHHHHHHHHHHHhhH--hhhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHH
Q 001665 217 ATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFP--AWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLK 294 (1035)
Q Consensus 217 ~~~~v~nP~tGevi~~v~~~s~~dv~~av~~Ar~A~~--~W~~~s~~~R~~iL~~la~~L~~~~e~La~~i~~etGk~~~ 294 (1035)
..++++||+||+++++++.++.+++++++++|++||+ .|+.++.++|.++|++++++|+++.++|++++++|+||+..
T Consensus 2 ~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~a~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ 81 (462)
T cd07112 2 ETFATINPATGRVLAEVAACDAADVDRAVAAARRAFESGVWSRLSPAERKAVLLRLADLIEAHRDELALLETLDMGKPIS 81 (462)
T ss_pred CeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHH
Confidence 3588999999999999999999999999999999998 49999999999999999999999999999999999999999
Q ss_pred HHHH-HHHHHHHHHHHHHHHHHhhcCccccCCCCCCcceeeeccceeEEEECCCCcchhchHHHHHHHHhcCCEEEEeCC
Q 001665 295 AAQR-DVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPS 373 (1035)
Q Consensus 295 eA~~-EV~~a~~~l~~~~~~a~~~~g~~~~~~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~ALaaGNaVVlKPS 373 (1035)
+++. |+..+++.+++++..+....+...+. ..+...+++++|+|||++|+|||||+.++++++++||++||+||+|||
T Consensus 82 ~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GvV~~i~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps 160 (462)
T cd07112 82 DALAVDVPSAANTFRWYAEAIDKVYGEVAPT-GPDALALITREPLGVVGAVVPWNFPLLMAAWKIAPALAAGNSVVLKPA 160 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCceecC-CCCeEEEEEEeeeeeEEEECCCchHHHHHHHHHHHHHHcCCeeeeeCC
Confidence 9974 99999999999988776655543222 133456789999999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHHhCCCCCcEEEeecc-hhhHhhhhcCCCccEEEEeccchHHHHHHHHHH-hcCCceeecCCCcce
Q 001665 374 EKNPGTSMILAALAMEAGLPDGVLNIVHGT-NDVINHICDDEDIKAISFVASSTASVQMYARAA-ARGKRVQSNRGGKNY 451 (1035)
Q Consensus 374 ~~ap~ta~~L~ell~eAGlP~gvv~vV~g~-~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa-~~l~Pv~lElGGknp 451 (1035)
+.+|.++..|+++|.++|+|+|++|+|+|+ .+.+..|+.|+++++|+||||+.+|+.|++.++ .+++|+++|+||+||
T Consensus 161 ~~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~~lelgG~n~ 240 (462)
T cd07112 161 EQSPLTALRLAELALEAGLPAGVLNVVPGFGHTAGEALGLHMDVDALAFTGSTEVGRRFLEYSGQSNLKRVWLECGGKSP 240 (462)
T ss_pred CCCCHHHHHHHHHHHhcCCCCCcEEEEeCCCchHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHHhcCCEEEecCCCCCe
Confidence 999999999999999999999999999984 578899999999999999999999999999988 489999999999999
Q ss_pred EEEcCCC-CHHHHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHhcccccCCCCCCCcCCCcCHHHHHHH
Q 001665 452 AIIMPDA-SIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQI 529 (1035)
Q Consensus 452 ~IV~~dA-Dld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d~~~~~Gpli~~~~~~rl 529 (1035)
+||++|| |++.|++.|++++|+|+||.|+++++|||+++++ +|+++|+++++++++|+|.++++++||++++.+++++
T Consensus 241 ~iV~~da~dl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v 320 (462)
T cd07112 241 NIVFADAPDLDAAAEAAAAGIFWNQGEVCSAGSRLLVHESIKDEFLEKVVAAAREWKPGDPLDPATRMGALVSEAHFDKV 320 (462)
T ss_pred EEECCCCcCHHHHHHHHHHHHHhccCCCCCCCeeEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCHHHHHHH
Confidence 9999999 9999999999999999999999999999999998 8999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecCCHHHHHHHHHhcCCCcEE
Q 001665 530 SRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGA 609 (1035)
Q Consensus 530 ~~~i~~av~~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI~laN~~~~GLsa 609 (1035)
.++|++++++|+++++||.... ....|+|++|||+.++++++.+++||+||||++|++|+|++|||+++|+++|||++
T Consensus 321 ~~~v~~a~~~Ga~v~~gg~~~~--~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~~ 398 (462)
T cd07112 321 LGYIESGKAEGARLVAGGKRVL--TETGGFFVEPTVFDGVTPDMRIAREEIFGPVLSVITFDSEEEAVALANDSVYGLAA 398 (462)
T ss_pred HHHHHHHHHCCCEEEeCCccCC--CCCCCeEEeeEEecCCCCCChHHhCCCCCceEEEEEeCCHHHHHHHHhCCCccceE
Confidence 9999999999999999986421 12358999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCHHHHHHHHhccceeEEEEcCCcC----CCCCCCCCCCCCCcCcHHHHHhcceeeEEE
Q 001665 610 SIFTSSGLAARKFQNEIEARLVGINVPVP----SSFSSINESGEFNFCGKSGVQFYTQIKTVA 668 (1035)
Q Consensus 610 sVfS~d~~~a~~~a~~l~sG~V~IN~~~~----~PfGG~g~SG~G~~~G~~g~~~ft~~k~v~ 668 (1035)
+|||+|.+++.+++.++++|.|+||+... +||||+|.||+|+++|.+|+++||+.|+++
T Consensus 399 ~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~f~~~k~i~ 461 (462)
T cd07112 399 SVWTSDLSRAHRVARRLRAGTVWVNCFDEGDITTPFGGFKQSGNGRDKSLHALDKYTELKTTW 461 (462)
T ss_pred EEEcCCHHHHHHHHHhcCcceEEECCCCCCCCCCCCCCcccccCCccchHHHHHHHhceeEEE
Confidence 99999999999999999999999998632 899999999999999999999999999875
|
NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. |
| >cd07125 ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-82 Score=760.18 Aligned_cols=460 Identities=25% Similarity=0.317 Sum_probs=426.2
Q ss_pred ceEEcCEEecCCCCCeEEeecCCC-CCeEEEecCCCHHHHHHHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHHhHHHH
Q 001665 203 SNFIGGKFVDLRGSATIDVINPAT-QEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKL 281 (1035)
Q Consensus 203 ~~~I~G~~~~~~~~~~~~v~nP~t-Gevi~~v~~~s~~dv~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e~L 281 (1035)
-.||+|+|.. ++.+++++||+| |+++++++.++.+|+++++++|++||+.|+.++.++|.++|++++++|+++.++|
T Consensus 34 ~p~i~g~~~~--~~~~~~v~~P~t~g~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 111 (518)
T cd07125 34 IPIINGEETE--TGEGAPVIDPADHERTIGEVSLADAEDVDAALAIAAAAFAGWSATPVEERAEILEKAADLLEANRGEL 111 (518)
T ss_pred CceECCEEee--CCCeEEEECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 4689999983 467899999999 9999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCccccCCCCCCcceeeeccceeEEEECCCCcchhchHHHHHHH
Q 001665 282 AMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIA 361 (1035)
Q Consensus 282 a~~i~~etGk~~~eA~~EV~~a~~~l~~~~~~a~~~~g~~~~~~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~A 361 (1035)
++++++|+||++.+++.|+..+++.+++++..+....+........+...+++++|+|||++|+|||||+.++++++++|
T Consensus 112 a~~~~~e~Gk~~~~a~~ev~~~i~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~P~GVV~~I~p~N~P~~~~~~~i~~A 191 (518)
T cd07125 112 IALAAAEAGKTLADADAEVREAIDFCRYYAAQARELFSDPELPGPTGELNGLELHGRGVFVCISPWNFPLAIFTGQIAAA 191 (518)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCceeEEEEecccEEEEECCcchHHHHHHHHHHHH
Confidence 99999999999999999999999999999887665443221111234566888999999999999999999999999999
Q ss_pred HhcCCEEEEeCCCCChhHHHHHHHHHHHhCCCCCcEEEeecch-hhHhhhhcCCCccEEEEeccchHHHHHHHHHHhc--
Q 001665 362 VTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGTN-DVINHICDDEDIKAISFVASSTASVQMYARAAAR-- 438 (1035)
Q Consensus 362 LaaGNaVVlKPS~~ap~ta~~L~ell~eAGlP~gvv~vV~g~~-e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~-- 438 (1035)
|++||+||+|||+.+|+++.+|+++|.++|+|+|+||+|+|+. +.+..|+.|+++|+|+||||+.+|+.|++.++++
T Consensus 192 LaaGN~VVlKps~~tp~~~~~l~~ll~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~ 271 (518)
T cd07125 192 LAAGNTVIAKPAEQTPLIAARAVELLHEAGVPRDVLQLVPGDGEEIGEALVAHPRIDGVIFTGSTETAKLINRALAERDG 271 (518)
T ss_pred HHcCCEEEEeCCCcCcHHHHHHHHHHHHcCCCCCcEEEEecCchhhHHHHhcCCCcCEEEEECCHHHHHHHHHHhhhccC
Confidence 9999999999999999999999999999999999999999965 4788999999999999999999999999998865
Q ss_pred -CCceeecCCCcceEEEcCCCCHHHHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHhcccccCCCCCCC
Q 001665 439 -GKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDASAD 516 (1035)
Q Consensus 439 -l~Pv~lElGGknp~IV~~dADld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d~~~~ 516 (1035)
++|+++|+|||||+||++|||++.|++.|++++|+|+||.|+++++|||+++++ +|+++|+++++.+++|+|.+++++
T Consensus 272 ~~~~v~lElgGk~p~iV~~dADl~~Aa~~iv~g~f~nsGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~ 351 (518)
T cd07125 272 PILPLIAETGGKNAMIVDSTALPEQAVKDVVQSAFGSAGQRCSALRLLYLQEEIAERFIEMLKGAMASLKVGDPWDLSTD 351 (518)
T ss_pred CCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcchhHHHHHHHHHHHHhcCCccCCCCCCCC
Confidence 789999999999999999999999999999999999999999999999999998 899999999999999999999999
Q ss_pred cCCCcCHHHHHHHHHHHHHHHHCCCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecC--CHH
Q 001665 517 VGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQAD--SLE 594 (1035)
Q Consensus 517 ~Gpli~~~~~~rl~~~i~~av~~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~--d~e 594 (1035)
+||++++.+++++.+++++++. ++++++||.. ....|+|++|||+.++ +|.+++||+||||++|++|+ |++
T Consensus 352 ~gpli~~~~~~~v~~~i~~a~~-~~~vl~gg~~----~~~~g~~~~Ptvl~~v--~~~i~~eE~FgPVl~v~~~~~~~~d 424 (518)
T cd07125 352 VGPLIDKPAGKLLRAHTELMRG-EAWLIAPAPL----DDGNGYFVAPGIIEIV--GIFDLTTEVFGPILHVIRFKAEDLD 424 (518)
T ss_pred cCCCcCHHHHHHHHHHHHHHHh-CCEEEeCCCc----CCCCCeEEccEEEeec--CChHhhCcccCCeEEEEEeCCCCHH
Confidence 9999999999999999999987 4689988853 1126899999999888 89999999999999999999 999
Q ss_pred HHHHHHHhcCCCcEEEEEcCCHHHHHHHHhccceeEEEEcCCc-----C-CCCCCCCCCCCCC-cCcHHHHHhcceeeEE
Q 001665 595 EAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPV-----P-SSFSSINESGEFN-FCGKSGVQFYTQIKTV 667 (1035)
Q Consensus 595 eAI~laN~~~~GLsasVfS~d~~~a~~~a~~l~sG~V~IN~~~-----~-~PfGG~g~SG~G~-~~G~~g~~~ft~~k~v 667 (1035)
|||+++|+++|||++||||+|.+.++++++++++|.|+||+.. . +||||+|.||+|+ .+|.+++++||+.|++
T Consensus 425 eAi~~~n~~~~gLta~Vft~d~~~~~~~~~~l~~G~V~IN~~~~~~~~~~~PfGG~~~SG~G~~~gg~~~~~~ft~~k~i 504 (518)
T cd07125 425 EAIEDINATGYGLTLGIHSRDEREIEYWRERVEAGNLYINRNITGAIVGRQPFGGWGLSGTGPKAGGPNYLLRFGNEKTV 504 (518)
T ss_pred HHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCCcccccCCcccccHHHHHHhcceEEE
Confidence 9999999999999999999999999999999999999999753 1 7999999999995 6889999999999999
Q ss_pred EEec
Q 001665 668 AQQW 671 (1035)
Q Consensus 668 ~~~~ 671 (1035)
++.+
T Consensus 505 ~~~~ 508 (518)
T cd07125 505 SLNT 508 (518)
T ss_pred EEEc
Confidence 8765
|
The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. |
| >cd07089 ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-83 Score=753.03 Aligned_cols=446 Identities=29% Similarity=0.421 Sum_probs=417.6
Q ss_pred eecCCCCCeEEEecCCCHHHHHHHHHHHHHhhHhhh-CCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-H
Q 001665 221 VINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWK-NTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQ-R 298 (1035)
Q Consensus 221 v~nP~tGevi~~v~~~s~~dv~~av~~Ar~A~~~W~-~~s~~~R~~iL~~la~~L~~~~e~La~~i~~etGk~~~eA~-~ 298 (1035)
++||+||+++++++.++.+|+++++++|++||+.|+ +++.++|.++|++++++|+++.++|++++++|+||+..++. .
T Consensus 1 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~w~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~ 80 (459)
T cd07089 1 VINPATEEVIGTAPDAGAADVDAAIAAARRAFDTGDWSTDAEERARCLRQLHEALEARKEELRALLVAEVGAPVMTARAM 80 (459)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHhhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHH
Confidence 469999999999999999999999999999999999 99999999999999999999999999999999999998775 4
Q ss_pred HHHHHHHHHHHHHHHHHhhcCccc-cCC---CCCCcceeeeccceeEEEECCCCcchhchHHHHHHHHhcCCEEEEeCCC
Q 001665 299 DVLFGLEVVEQACAVATLQIGEFV-PNA---LCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSE 374 (1035)
Q Consensus 299 EV~~a~~~l~~~~~~a~~~~g~~~-~~~---~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~ALaaGNaVVlKPS~ 374 (1035)
|+..+++.++++++.+....+... ... ..+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+
T Consensus 81 ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~~~~~~AL~aGN~vvlKps~ 160 (459)
T cd07089 81 QVDGPIGHLRYFADLADSFPWEFDLPVPALRGGPGRRVVRREPVGVVAAITPWNFPFFLNLAKLAPALAAGNTVVLKPAP 160 (459)
T ss_pred HHHHHHHHHHHHHHHHHHhcCceecCcccccCCCceeEEEEeeccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCC
Confidence 999999999999887765544331 211 1244567899999999999999999999999999999999999999999
Q ss_pred CChhHHHHHHHHHHHhCCCCCcEEEeecch-hhHhhhhcCCCccEEEEeccchHHHHHHHHHHhcCCceeecCCCcceEE
Q 001665 375 KNPGTSMILAALAMEAGLPDGVLNIVHGTN-DVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAI 453 (1035)
Q Consensus 375 ~ap~ta~~L~ell~eAGlP~gvv~vV~g~~-e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~l~Pv~lElGGknp~I 453 (1035)
.+|.++..|+++|.++|+|+|+|++|+|+. +.+..|+.|+++++|+||||+.+|+.|++.++++++|+++|+|||||+|
T Consensus 161 ~~p~~~~~l~~~~~~aglP~g~~~~v~g~~~~~~~~l~~~~~~~~v~ftGs~~~g~~v~~~aa~~~~~~~lelgG~n~~i 240 (459)
T cd07089 161 DTPLSALLLGEIIAETDLPAGVVNVVTGSDNAVGEALTTDPRVDMVSFTGSTAVGRRIMAQAAATLKRVLLELGGKSANI 240 (459)
T ss_pred CChHHHHHHHHHHHHcCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEEECCCCCeeE
Confidence 999999999999999999999999999955 5788999999999999999999999999999999999999999999999
Q ss_pred EcCCCCHHHHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHhcccccCCCCCCCcCCCcCHHHHHHHHHH
Q 001665 454 IMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRL 532 (1035)
Q Consensus 454 V~~dADld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d~~~~~Gpli~~~~~~rl~~~ 532 (1035)
|++|||++.|++.|++++|+|+||.|+++++||||++++ +|+++|+++++++++|+|.++++++||++++.+++++.++
T Consensus 241 V~~dadl~~aa~~i~~~~~~~sGQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~i~~~~~~~v~~~ 320 (459)
T cd07089 241 VLDDADLAAAAPAAVGVCMHNAGQGCALTTRLLVPRSRYDEVVEALAAAFEALPVGDPADPGTVMGPLISAAQRDRVEGY 320 (459)
T ss_pred ECCCCCHHHHHHHHHHHHHHhcCCcccCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHHHHH
Confidence 999999999999999999999999999999999999998 8999999999999999999999999999999999999999
Q ss_pred HHHHHHCCCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecCCHHHHHHHHHhcCCCcEEEEE
Q 001665 533 IQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIF 612 (1035)
Q Consensus 533 i~~av~~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI~laN~~~~GLsasVf 612 (1035)
+++++++|+++++||.... ....|+|++|||+.++++++.+++||+||||++|++|+|+||||+++|+++|||+++||
T Consensus 321 i~~a~~~Ga~~l~gg~~~~--~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~~~v~ 398 (459)
T cd07089 321 IARGRDEGARLVTGGGRPA--GLDKGFYVEPTLFADVDNDMRIAQEEIFGPVLVVIPYDDDDEAVRIANDSDYGLSGGVW 398 (459)
T ss_pred HHHHHHCCCEEEeCCCcCC--CCCCCeEECCEEEEcCCCCCHHHhCCCcCceEEEeccCCHHHHHHHHhCCCCCCeEEEE
Confidence 9999999999999987421 12368999999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHhccceeEEEEcCCcC----CCCCCCCCCCCCCcCcHHHHHhcceeeEEE
Q 001665 613 TSSGLAARKFQNEIEARLVGINVPVP----SSFSSINESGEFNFCGKSGVQFYTQIKTVA 668 (1035)
Q Consensus 613 S~d~~~a~~~a~~l~sG~V~IN~~~~----~PfGG~g~SG~G~~~G~~g~~~ft~~k~v~ 668 (1035)
|+|.++++++++++++|.|+||+... +||||+|.||+|+++|.+|+++||+.|+++
T Consensus 399 t~d~~~~~~~~~~~~~G~v~iN~~~~~~~~~PfgG~k~SG~G~~~g~~~l~~ft~~k~v~ 458 (459)
T cd07089 399 SADVDRAYRVARRIRTGSVGINGGGGYGPDAPFGGYKQSGLGRENGIEGLEEFLETKSIA 458 (459)
T ss_pred cCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCcCCcccccCCCCchHHHHHHhhceeEEe
Confidence 99999999999999999999998642 899999999999999999999999999875
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. |
| >cd07094 ALDH_F21_LactADH-like ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-83 Score=753.48 Aligned_cols=440 Identities=30% Similarity=0.443 Sum_probs=415.1
Q ss_pred EeecCCCCCeEEEecCCCHHHHHHHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHH
Q 001665 220 DVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRD 299 (1035)
Q Consensus 220 ~v~nP~tGevi~~v~~~s~~dv~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e~La~~i~~etGk~~~eA~~E 299 (1035)
+++||+||+++++++.++.+|+++++++|++||+.|+.++.++|.++|++++++|+++.++|++++++|+||+..+++.|
T Consensus 2 ~~~~P~t~~~~~~~~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~e 81 (453)
T cd07094 2 DVHNPYDGEVIGKVPADDRADAEEALATARAGAENRRALPPHERMAILERAADLLKKRAEEFAKIIACEGGKPIKDARVE 81 (453)
T ss_pred CccCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhcCccccCCC----CCCcceeeeccceeEEEECCCCcchhchHHHHHHHHhcCCEEEEeCCCC
Q 001665 300 VLFGLEVVEQACAVATLQIGEFVPNAL----CGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEK 375 (1035)
Q Consensus 300 V~~a~~~l~~~~~~a~~~~g~~~~~~~----~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~ALaaGNaVVlKPS~~ 375 (1035)
+..+++.+++++..+....++..+... .+...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.
T Consensus 82 v~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~VI~Kps~~ 161 (453)
T cd07094 82 VDRAIDTLRLAAEEAERIRGEEIPLDATQGSDNRLAWTIREPVGVVLAITPFNFPLNLVAHKLAPAIATGCPVVLKPASK 161 (453)
T ss_pred HHHHHHHHHHHHHHHHHhcCccccccccccCCCceEEEEEeccceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCc
Confidence 999999999998877665554332211 2344577899999999999999999999999999999999999999999
Q ss_pred ChhHHHHHHHHHHHhCCCCCcEEEeecch-hhHhhhhcCCCccEEEEeccchHHHHHHHHHHhcCCceeecCCCcceEEE
Q 001665 376 NPGTSMILAALAMEAGLPDGVLNIVHGTN-DVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAII 454 (1035)
Q Consensus 376 ap~ta~~L~ell~eAGlP~gvv~vV~g~~-e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~l~Pv~lElGGknp~IV 454 (1035)
+|.++..|+++|.++|+|+|+|++|+|+. +.+..|+.|+++++|+||||+.+|+.|++.+ .++|+++|+|||||+||
T Consensus 162 ~p~~~~~l~~~l~~ag~P~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~a--~~~~~~lelGGk~~~iV 239 (453)
T cd07094 162 TPLSALELAKILVEAGVPEGVLQVVTGEREVLGDAFAADERVAMLSFTGSAAVGEALRANA--GGKRIALELGGNAPVIV 239 (453)
T ss_pred chHHHHHHHHHHHHcCCCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHc--CCCceEEecCCCCceEE
Confidence 99999999999999999999999999865 5689999999999999999999999999887 68999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHhcccccCCCCCCCcCCCcCHHHHHHHHHHH
Q 001665 455 MPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLI 533 (1035)
Q Consensus 455 ~~dADld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d~~~~~Gpli~~~~~~rl~~~i 533 (1035)
++|||++.|++.|++++|+++||.|+++++|||+++++ +|+++|+++++++++|+|.++++++||++++.+++++.+++
T Consensus 240 ~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~i~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i 319 (453)
T cd07094 240 DRDADLDAAIEALAKGGFYHAGQVCISVQRIYVHEELYDEFIEAFVAAVKKLKVGDPLDEDTDVGPLISEEAAERVERWV 319 (453)
T ss_pred CCCCCHHHHHHHHHHHHHHhcCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999998 99999999999999999999999999999999999999999
Q ss_pred HHHHHCCCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecCCHHHHHHHHHhcCCCcEEEEEc
Q 001665 534 QNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFT 613 (1035)
Q Consensus 534 ~~av~~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI~laN~~~~GLsasVfS 613 (1035)
++++++|+++++||.. .|.|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||++||||
T Consensus 320 ~~a~~~Ga~v~~gg~~-------~g~~~~Ptvl~~~~~~~~i~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t 392 (453)
T cd07094 320 EEAVEAGARLLCGGER-------DGALFKPTVLEDVPRDTKLSTEETFGPVVPIIRYDDFEEAIRIANSTDYGLQAGIFT 392 (453)
T ss_pred HHHHHCCCEEEeCccC-------CCeEEeCEEEeCCCCCChhhhCCCcCceEEEEEeCCHHHHHHHHhCCCCCCeeEEEC
Confidence 9999999999999852 478999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhccceeEEEEcCCc----C-CCCCCCCCCCCCCcCcHHHHHhcceeeEEE
Q 001665 614 SSGLAARKFQNEIEARLVGINVPV----P-SSFSSINESGEFNFCGKSGVQFYTQIKTVA 668 (1035)
Q Consensus 614 ~d~~~a~~~a~~l~sG~V~IN~~~----~-~PfGG~g~SG~G~~~G~~g~~~ft~~k~v~ 668 (1035)
+|.+++.++++++++|.|+||+.. . +||||+|.||+|+++|++|+++|++.|+++
T Consensus 393 ~d~~~a~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~~~SG~G~~~g~~~~~~~~~~k~i~ 452 (453)
T cd07094 393 RDLNVAFKAAEKLEVGGVMVNDSSAFRTDWMPFGGVKESGVGREGVPYAMEEMTEEKTVV 452 (453)
T ss_pred CCHHHHHHHHHhcCcCeEEEcCCCCCCCCCCCCCCccccccCcCChHHHHHHHhceeEEe
Confidence 999999999999999999999762 2 899999999999999999999999999985
|
ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. |
| >cd07101 ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-83 Score=751.76 Aligned_cols=441 Identities=28% Similarity=0.393 Sum_probs=411.8
Q ss_pred cCCCCCeEEEecCCCHHHHHHHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHH
Q 001665 223 NPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLF 302 (1035)
Q Consensus 223 nP~tGevi~~v~~~s~~dv~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e~La~~i~~etGk~~~eA~~EV~~ 302 (1035)
||+||+++++++.++.+|+++++++|++||+.|+.++.++|.++|++++++|+++.++|++++++|+||+..++..|+..
T Consensus 2 ~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~a~~ev~~ 81 (454)
T cd07101 2 APFTGEPLGELPQSTPADVEAAFARARAAQRAWAARPFAERAAVFLRFHDLVLERRDELLDLIQLETGKARRHAFEEVLD 81 (454)
T ss_pred cCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcCcc-ccCCCC-CCcceeeeccceeEEEECCCCcchhchHHHHHHHHhcCCEEEEeCCCCChhHH
Q 001665 303 GLEVVEQACAVATLQIGEF-VPNALC-GLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTS 380 (1035)
Q Consensus 303 a~~~l~~~~~~a~~~~g~~-~~~~~~-g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~ALaaGNaVVlKPS~~ap~ta 380 (1035)
++..+++++..+....+.. ...... ....+.+++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~ 161 (454)
T cd07101 82 VAIVARYYARRAERLLKPRRRRGAIPVLTRTTVNRRPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTALTA 161 (454)
T ss_pred HHHHHHHHHHHHHHHhCCccccccCCCCceEEEEEEeccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCccchHHH
Confidence 9999999887665443322 111111 23567899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCCcEEEeecc-hhhHhhhhcCCCccEEEEeccchHHHHHHHHHHhcCCceeecCCCcceEEEcCCCC
Q 001665 381 MILAALAMEAGLPDGVLNIVHGT-NDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMPDAS 459 (1035)
Q Consensus 381 ~~L~ell~eAGlP~gvv~vV~g~-~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~l~Pv~lElGGknp~IV~~dAD 459 (1035)
.+|++++.++|+|+|++|+|+|+ .+.+..|+.| ++.|+||||+.+|+.|++.++++++|+++|||||||+||++|||
T Consensus 162 ~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~--~~~V~fTGs~~~g~~i~~~aa~~~~~~~lElgG~~p~iV~~dAd 239 (454)
T cd07101 162 LWAVELLIEAGLPRDLWQVVTGPGSEVGGAIVDN--ADYVMFTGSTATGRVVAERAGRRLIGCSLELGGKNPMIVLEDAD 239 (454)
T ss_pred HHHHHHHHHcCcCCCcEEEEeCCcHHHHHHHHhC--CCEEEEECCHHHHHHHHHHHHhcCCcEEEECCCCceEEECCCCC
Confidence 99999999999999999999995 4678889886 67899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHhcccccCCCCCCCcCCCcCHHHHHHHHHHHHHHHH
Q 001665 460 IDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVD 538 (1035)
Q Consensus 460 ld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d~~~~~Gpli~~~~~~rl~~~i~~av~ 538 (1035)
++.|++.|++++|+|+||.|+++++||||++++ +|+++|+++++.+++|+|.++++++|||+++.+++++.++++++++
T Consensus 240 l~~a~~~i~~~~~~~sGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~G~~~~~~~~~gpli~~~~~~~v~~~v~~a~~ 319 (454)
T cd07101 240 LDKAAAGAVRACFSNAGQLCVSIERIYVHESVYDEFVRRFVARTRALRLGAALDYGPDMGSLISQAQLDRVTAHVDDAVA 319 (454)
T ss_pred HHHHHHHHHHHHHhcCCCCcccCeEEEEcHHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999998 8999999999999999999999999999999999999999999999
Q ss_pred CCCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecCCHHHHHHHHHhcCCCcEEEEEcCCHHH
Q 001665 539 NGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLA 618 (1035)
Q Consensus 539 ~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI~laN~~~~GLsasVfS~d~~~ 618 (1035)
+|+++++||... + +..|+|++|||+.++++++.+++||+||||++|++|+|+||||+++|+++|||++||||+|.++
T Consensus 320 ~Ga~vl~gg~~~--~-~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~ 396 (454)
T cd07101 320 KGATVLAGGRAR--P-DLGPYFYEPTVLTGVTEDMELFAEETFGPVVSIYRVADDDEAIELANDTDYGLNASVWTRDGAR 396 (454)
T ss_pred CCCEEEeCCCCC--C-CCCCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHH
Confidence 999999998632 1 2357999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhccceeEEEEcCCc------C-CCCCCCCCCCCCCcCcHHHHHhcceeeEEE
Q 001665 619 ARKFQNEIEARLVGINVPV------P-SSFSSINESGEFNFCGKSGVQFYTQIKTVA 668 (1035)
Q Consensus 619 a~~~a~~l~sG~V~IN~~~------~-~PfGG~g~SG~G~~~G~~g~~~ft~~k~v~ 668 (1035)
+.++++++++|.|+||+.. . +||||+|.||+|+++|.+|+++||+.|++.
T Consensus 397 a~~~~~~l~~G~v~iN~~~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~v~ 453 (454)
T cd07101 397 GRRIAARLRAGTVNVNEGYAAAWASIDAPMGGMKDSGLGRRHGAEGLLKYTETQTVA 453 (454)
T ss_pred HHHHHHhcCcceEEECCCCCcCcCCCCCCCCcccccccCccchHHHHHHhcceEEEe
Confidence 9999999999999999852 2 799999999999999999999999999875
|
Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). |
| >cd07147 ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-83 Score=752.75 Aligned_cols=441 Identities=30% Similarity=0.446 Sum_probs=414.6
Q ss_pred EeecCCCCCeEEEecCCCHHHHHHHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHH
Q 001665 220 DVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRD 299 (1035)
Q Consensus 220 ~v~nP~tGevi~~v~~~s~~dv~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e~La~~i~~etGk~~~eA~~E 299 (1035)
+++||+||+++++++.++.+++++++++|++||+.|+.++.++|.++|++++++|+++.++|++++++|+||++.+++.|
T Consensus 2 ~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~e 81 (452)
T cd07147 2 EVTNPYTGEVVARVALAGPDDIEEAIAAAVKAFRPMRALPAHRRAAILLHCVARLEERFEELAETIVLEAGKPIKDARGE 81 (452)
T ss_pred CccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhcCccccCC----CCCCcceeeeccceeEEEECCCCcchhchHHHHHHHHhcCCEEEEeCCCC
Q 001665 300 VLFGLEVVEQACAVATLQIGEFVPNA----LCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEK 375 (1035)
Q Consensus 300 V~~a~~~l~~~~~~a~~~~g~~~~~~----~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~ALaaGNaVVlKPS~~ 375 (1035)
+..++..++++++.+....++..... ..+...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.
T Consensus 82 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VIlKps~~ 161 (452)
T cd07147 82 VARAIDTFRIAAEEATRIYGEVLPLDISARGEGRQGLVRRFPIGPVSAITPFNFPLNLVAHKVAPAIAAGCPFVLKPASR 161 (452)
T ss_pred HHHHHHHHHHHHHHHHHhCCcccccccccCCCCceeEEEEeceeEEEEEcCCCcHHHHHHHHHHHHHHcCCEEEEECCCC
Confidence 99999999998887655444322211 12445567899999999999999999999999999999999999999999
Q ss_pred ChhHHHHHHHHHHHhCCCCCcEEEeecchhhHhhhhcCCCccEEEEeccchHHHHHHHHHHhcCCceeecCCCcceEEEc
Q 001665 376 NPGTSMILAALAMEAGLPDGVLNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIM 455 (1035)
Q Consensus 376 ap~ta~~L~ell~eAGlP~gvv~vV~g~~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~l~Pv~lElGGknp~IV~ 455 (1035)
+|.++.+|+++|.++|+|+|+||+|+|+.+.+..|+.|+++++|+||||..+|+.|++.++ .+|+++|+|||||+||+
T Consensus 162 ~p~~~~~l~~~l~~ag~P~g~v~~v~g~~~~~~~l~~~~~v~~v~fTGs~~~g~~v~~~a~--~~~v~lelgG~~p~iV~ 239 (452)
T cd07147 162 TPLSALILGEVLAETGLPKGAFSVLPCSRDDADLLVTDERIKLLSFTGSPAVGWDLKARAG--KKKVVLELGGNAAVIVD 239 (452)
T ss_pred CcHHHHHHHHHHHHcCCCcCcEEEEeCCccchhHHhcCCCCCEEEEECCHHHHHHHHHHhC--cCceEeecCCCCcEEEC
Confidence 9999999999999999999999999998788899999999999999999999999999876 47999999999999999
Q ss_pred CCCCHHHHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHhcccccCCCCCCCcCCCcCHHHHHHHHHHHH
Q 001665 456 PDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQ 534 (1035)
Q Consensus 456 ~dADld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d~~~~~Gpli~~~~~~rl~~~i~ 534 (1035)
+|||++.|++.|++++|+|+||.|+++++||||++++ +|+++|+++++.+++|+|.++++++||++++.+++++.++|+
T Consensus 240 ~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~ 319 (452)
T cd07147 240 SDADLDFAAQRIIFGAFYQAGQSCISVQRVLVHRSVYDEFKSRLVARVKALKTGDPKDDATDVGPMISESEAERVEGWVN 319 (452)
T ss_pred CCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEchhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999998 899999999999999999999999999999999999999999
Q ss_pred HHHHCCCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecCCHHHHHHHHHhcCCCcEEEEEcC
Q 001665 535 NAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTS 614 (1035)
Q Consensus 535 ~av~~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI~laN~~~~GLsasVfS~ 614 (1035)
+++++|+++++||.. .|.|++||||.++++++.+++||+||||++|++|+|+||||+++|+++|||++||||+
T Consensus 320 ~a~~~Ga~~l~gg~~-------~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~ 392 (452)
T cd07147 320 EAVDAGAKLLTGGKR-------DGALLEPTILEDVPPDMEVNCEEVFGPVVTVEPYDDFDEALAAVNDSKFGLQAGVFTR 392 (452)
T ss_pred HHHHCCCEEEecCCc-------CCEEEcCEEEeCCCCCChHHhCcCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEECC
Confidence 999999999999863 4889999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhccceeEEEEcCCcC-----CCCCCCCCCCCCCcCcHHHHHhcceeeEEEE
Q 001665 615 SGLAARKFQNEIEARLVGINVPVP-----SSFSSINESGEFNFCGKSGVQFYTQIKTVAQ 669 (1035)
Q Consensus 615 d~~~a~~~a~~l~sG~V~IN~~~~-----~PfGG~g~SG~G~~~G~~g~~~ft~~k~v~~ 669 (1035)
|.++++++++++++|+|+||+... +||||+|.||+|+++|.+|+++||+.|+|++
T Consensus 393 d~~~a~~~~~~~~~G~v~vN~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~i~~ 452 (452)
T cd07147 393 DLEKALRAWDELEVGGVVINDVPTFRVDHMPYGGVKDSGIGREGVRYAIEEMTEPRLLVI 452 (452)
T ss_pred CHHHHHHHHHHcCcceEEECCCCCCCCCCCCcCCccccccCCCChHHHHHHhcceeEEeC
Confidence 999999999999999999997521 7999999999999999999999999999863
|
Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. |
| >cd07082 ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-82 Score=751.49 Aligned_cols=459 Identities=29% Similarity=0.421 Sum_probs=430.6
Q ss_pred cceEEcCEEecCCCCCeEEeecCCCCCeEEEecCCCHHHHHHHHHHHHHhhHhhhCC-CHHHHHHHHHHHHHHHHHhHHH
Q 001665 202 VSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNT-PVATRQRIMFKLQELIRRDIDK 280 (1035)
Q Consensus 202 ~~~~I~G~~~~~~~~~~~~v~nP~tGevi~~v~~~s~~dv~~av~~Ar~A~~~W~~~-s~~~R~~iL~~la~~L~~~~e~ 280 (1035)
+++||||+|+.+. +..++++||+||+++++++.++.+|+++++++|++||+.|... +.++|.++|++++++|++++++
T Consensus 2 ~~~~i~g~~~~~~-~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~~R~~~L~~~a~~l~~~~~e 80 (473)
T cd07082 2 FKYLINGEWKESS-GKTIEVYSPIDGEVIGSVPALSALEILEAAETAYDAGRGWWPTMPLEERIDCLHKFADLLKENKEE 80 (473)
T ss_pred CCceECCEEecCC-CCeEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 5689999999864 6789999999999999999999999999999999999999988 9999999999999999999999
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCccccCC----CCCCcceeeeccceeEEEECCCCcchhchHH
Q 001665 281 LAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVPNA----LCGLDTYCFREPLGVCAGICPFNFPDMTPLW 356 (1035)
Q Consensus 281 La~~i~~etGk~~~eA~~EV~~a~~~l~~~~~~a~~~~g~~~~~~----~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~ 356 (1035)
|++++++|+||+..++..|+..+++.++++++......+...... ..+...+.+++|+|||++|+|||||+.++++
T Consensus 81 l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~ 160 (473)
T cd07082 81 VANLLMWEIGKTLKDALKEVDRTIDYIRDTIEELKRLDGDSLPGDWFPGTKGKIAQVRREPLGVVLAIGPFNYPLNLTVS 160 (473)
T ss_pred HHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccccCCCceeEEEEecceEEEEECCcCcHHHHHHH
Confidence 999999999999999999999999999999887766544433211 1344567899999999999999999999999
Q ss_pred HHHHHHhcCCEEEEeCCCCChhHHHHHHHHHHHhCCCCCcEEEeecch-hhHhhhhcCCCccEEEEeccchHHHHHHHHH
Q 001665 357 MFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGTN-DVINHICDDEDIKAISFVASSTASVQMYARA 435 (1035)
Q Consensus 357 ~l~~ALaaGNaVVlKPS~~ap~ta~~L~ell~eAGlP~gvv~vV~g~~-e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aA 435 (1035)
++++||++||+||+|||+.+|.++.+|+++|.++|+|+|++++++|.. +.+..|+.|+++|.|+||||..+|+.|++.+
T Consensus 161 ~i~~AL~aGN~vilKps~~~~~~~~~l~~~l~~aglp~~~~~vv~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~a 240 (473)
T cd07082 161 KLIPALIMGNTVVFKPATQGVLLGIPLAEAFHDAGFPKGVVNVVTGRGREIGDPLVTHGRIDVISFTGSTEVGNRLKKQH 240 (473)
T ss_pred HHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHcCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999854 5688999999999999999999999999887
Q ss_pred HhcCCceeecCCCcceEEEcCCCCHHHHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHhcccccCCCCC
Q 001665 436 AARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDAS 514 (1035)
Q Consensus 436 a~~l~Pv~lElGGknp~IV~~dADld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d~~ 514 (1035)
+ ++|+++|+|||||+||++|||++.|++.+++++|+++||.|+++++|||+++++ +|+++|+++++++++|+|.+++
T Consensus 241 ~--~~~~~lelgg~n~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~~~~~~ 318 (473)
T cd07082 241 P--MKRLVLELGGKDPAIVLPDADLELAAKEIVKGALSYSGQRCTAIKRVLVHESVADELVELLKEEVAKLKVGMPWDNG 318 (473)
T ss_pred C--CCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHHhCCCcCCCCeEEEEcHHHHHHHHHHHHHHHhcCCCCCCCCCC
Confidence 6 899999999999999999999999999999999999999999999999999998 9999999999999999999999
Q ss_pred CCcCCCcCHHHHHHHHHHHHHHHHCCCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecCCHH
Q 001665 515 ADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLE 594 (1035)
Q Consensus 515 ~~~Gpli~~~~~~rl~~~i~~av~~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~e 594 (1035)
+++||++++.+++++.+++++++.+|+++++||.. ..|.|+.|||+.++++++.+++||+||||++|++|+|++
T Consensus 319 ~~~gp~i~~~~~~~~~~~~~~a~~~ga~~~~gg~~------~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~ 392 (473)
T cd07082 319 VDITPLIDPKSADFVEGLIDDAVAKGATVLNGGGR------EGGNLIYPTLLDPVTPDMRLAWEEPFGPVLPIIRVNDIE 392 (473)
T ss_pred CCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc------CCCeEEeeEEEecCCCCCHHHhCcCcCceEEEEEeCCHH
Confidence 99999999999999999999999999999999864 138999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCcEEEEEcCCHHHHHHHHhccceeEEEEcCCc----C-CCCCCCCCCCCCCcCcHHHHHhcceeeEEEE
Q 001665 595 EAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPV----P-SSFSSINESGEFNFCGKSGVQFYTQIKTVAQ 669 (1035)
Q Consensus 595 eAI~laN~~~~GLsasVfS~d~~~a~~~a~~l~sG~V~IN~~~----~-~PfGG~g~SG~G~~~G~~g~~~ft~~k~v~~ 669 (1035)
|||+++|+.+|||+++|||+|.+.+.++++++++|.|+||+.. . +||||+|.||+|+++|.+|+++||+.|++++
T Consensus 393 eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~pfGG~k~SG~g~~~g~~~l~~~~~~k~i~~ 472 (473)
T cd07082 393 EAIELANKSNYGLQASIFTKDINKARKLADALEVGTVNINSKCQRGPDHFPFLGRKDSGIGTQGIGDALRSMTRRKGIVI 472 (473)
T ss_pred HHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCcccccccCCCChHHHHHHhhceeEEEE
Confidence 9999999999999999999999999999999999999999853 2 7999999999999999999999999999864
|
NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. |
| >cd07108 ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-82 Score=750.83 Aligned_cols=446 Identities=30% Similarity=0.435 Sum_probs=416.8
Q ss_pred eecCCCCCeEEEecCCCHHHHHHHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCH-HHHHHH
Q 001665 221 VINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTL-KAAQRD 299 (1035)
Q Consensus 221 v~nP~tGevi~~v~~~s~~dv~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e~La~~i~~etGk~~-~eA~~E 299 (1035)
++||+||+++++++.++.+|+++++++|++||+.|+.++.++|.++|++++++|+++.++|++++++|+||++ .+++.|
T Consensus 1 ~~~P~t~~~~~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~a~~e 80 (457)
T cd07108 1 VINPATGQVIGEVPRSRAADVDRAVAAAKAAFPEWAATPARERGKLLARIADALEARSEELARLLALETGNALRTQARPE 80 (457)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCcHHHHHHH
Confidence 4799999999999999999999999999999999999999999999999999999999999999999999997 688899
Q ss_pred HHHHHHHHHHHHHHHHhhcCccccCCCCCCcceeeeccceeEEEECCCCcchhchHHHHHHHHhcCCEEEEeCCCCChhH
Q 001665 300 VLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGT 379 (1035)
Q Consensus 300 V~~a~~~l~~~~~~a~~~~g~~~~~~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~ALaaGNaVVlKPS~~ap~t 379 (1035)
+..+++.++++++...+..+...+.. .+...+..++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.+
T Consensus 81 v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~ 159 (457)
T cd07108 81 AAVLADLFRYFGGLAGELKGETLPFG-PDVLTYTVREPLGVVGAILPWNAPLMLAALKIAPALVAGNTVVLKAAEDAPLA 159 (457)
T ss_pred HHHHHHHHHHHHHHHHHhCCceeccC-CCeeEEEEeecceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCcHH
Confidence 99999999998887766655543322 34455778999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCCCcEEEeecc-hhhHhhhhcCCCccEEEEeccchHHHHHHHHHHhcCCceeecCCCcceEEEcCCC
Q 001665 380 SMILAALAMEAGLPDGVLNIVHGT-NDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMPDA 458 (1035)
Q Consensus 380 a~~L~ell~eAGlP~gvv~vV~g~-~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~l~Pv~lElGGknp~IV~~dA 458 (1035)
+.++++++.++ +|+|++++|+|+ .+.+..|+.|+++|+|+||||+.+|+.|++.++++++|+++|+|||||+||++||
T Consensus 160 ~~~l~~~~~~~-lP~~~~~~v~g~~~~~~~~L~~~~~vd~v~ftGs~~~g~~v~~~aa~~l~~~~lelgG~~~~iV~~dA 238 (457)
T cd07108 160 VLLLAEILAQV-LPAGVLNVITGYGEECGAALVDHPDVDKVTFTGSTEVGKIIYRAAADRLIPVSLELGGKSPMIVFPDA 238 (457)
T ss_pred HHHHHHHHHHh-CCcCcEEEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHHHHHhccCCeEEEECCCCCeeEECCCC
Confidence 99999999986 999999999984 5778899999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHH-hccCCCCccCCceEEEeCccH-HHHHHHHHHHHhcccccCCCCCCCcCCCcCHHHHHHHHHHHHHH
Q 001665 459 SIDATLNALVSAG-FGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNA 536 (1035)
Q Consensus 459 Dld~Aa~~Iv~s~-f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d~~~~~Gpli~~~~~~rl~~~i~~a 536 (1035)
|++.|++.|++++ |.|+||.|+++++|||+++++ +|+++|+++++.+++|+|.++++++||++++.+++++.++++++
T Consensus 239 dl~~Aa~~iv~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~~a 318 (457)
T cd07108 239 DLDDAVDGAIAGMRFTRQGQSCTAGSRLFVHEDIYDAFLEKLVAKLSKLKIGDPLDEATDIGAIISEKQFAKVCGYIDLG 318 (457)
T ss_pred CHHHHHHHHHHhhHhhcCCCCCCCCeEEEEehHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHH
Confidence 9999999999995 999999999999999999998 89999999999999999999999999999999999999999999
Q ss_pred HH-CCCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecCCHHHHHHHHHhcCCCcEEEEEcCC
Q 001665 537 VD-NGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSS 615 (1035)
Q Consensus 537 v~-~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI~laN~~~~GLsasVfS~d 615 (1035)
++ +|+++++||..........|+|++|||+.+++++|.+++||+||||++|++|+|++|||+++|+++|||++||||+|
T Consensus 319 ~~~~ga~vl~gG~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gLs~~vft~d 398 (457)
T cd07108 319 LSTSGATVLRGGPLPGEGPLADGFFVQPTIFSGVDNEWRLAREEIFGPVLCAIPWKDEDEVIAMANDSHYGLAAYVWTRD 398 (457)
T ss_pred HhCCCCEEEeCCCcCccCCCCCceEECCEEEecCCCCChhhhcCCCCceEEeecCCCHHHHHHHHhCCCcCceeEEEcCC
Confidence 98 99999999975322223468999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccceeEEEEcCCcC----CCCCCCCCCCCCCcCcHHH-HHhcceeeEEE
Q 001665 616 GLAARKFQNEIEARLVGINVPVP----SSFSSINESGEFNFCGKSG-VQFYTQIKTVA 668 (1035)
Q Consensus 616 ~~~a~~~a~~l~sG~V~IN~~~~----~PfGG~g~SG~G~~~G~~g-~~~ft~~k~v~ 668 (1035)
.+.++++++++++|.|+||++.. +||||+|.||+|+++|.++ +++||+.|++.
T Consensus 399 ~~~a~~~~~~l~~g~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~~~~~f~~~k~i~ 456 (457)
T cd07108 399 LGRALRAAHALEAGWVQVNQGGGQQPGQSYGGFKQSGLGREASLEGMLEHFTQKKTVN 456 (457)
T ss_pred HHHHHHHHHhcCcceEEECCCCCCCCCCCcCCcccCcCCCCccchhHHHHhhceEEEe
Confidence 99999999999999999998742 8999999999999999977 69999999875
|
NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. |
| >cd07114 ALDH_DhaS Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-82 Score=749.87 Aligned_cols=448 Identities=32% Similarity=0.451 Sum_probs=419.4
Q ss_pred eecCCCCCeEEEecCCCHHHHHHHHHHHHHhhH--hhhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHH
Q 001665 221 VINPATQEVGSQVPLTTYEEFKDAVDAAKRAFP--AWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQR 298 (1035)
Q Consensus 221 v~nP~tGevi~~v~~~s~~dv~~av~~Ar~A~~--~W~~~s~~~R~~iL~~la~~L~~~~e~La~~i~~etGk~~~eA~~ 298 (1035)
++||+||++|++++.++.+++++++++|++|++ .|+.++.++|.++|++++++|.+++++|++++++|+||++.+++.
T Consensus 1 ~~~P~tg~~i~~~~~~~~~~v~~av~~a~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~ 80 (457)
T cd07114 1 SINPATGEPWARVPEASAADVDRAVAAARAAFEGGAWRKLTPTERGKLLRRLADLIEANAEELAELETRDNGKLIRETRA 80 (457)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHH
Confidence 369999999999999999999999999999997 599999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcCccccCCCCCCcceeeeccceeEEEECCCCcchhchHHHHHHHHhcCCEEEEeCCCCChh
Q 001665 299 DVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPG 378 (1035)
Q Consensus 299 EV~~a~~~l~~~~~~a~~~~g~~~~~~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~ALaaGNaVVlKPS~~ap~ 378 (1035)
|+..+++.+++++.......+...+....+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.
T Consensus 81 ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~Vilkps~~~p~ 160 (457)
T cd07114 81 QVRYLAEWYRYYAGLADKIEGAVIPVDKGDYLNFTRREPLGVVAAITPWNSPLLLLAKKLAPALAAGNTVVLKPSEHTPA 160 (457)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEecceEEEEECCCccHHHHHHHHHHHHHhcCCeEEeECCccchH
Confidence 99999999999887766554433332223455678999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCCcEEEeecc-hhhHhhhhcCCCccEEEEeccchHHHHHHHHHHhcCCceeecCCCcceEEEcCC
Q 001665 379 TSMILAALAMEAGLPDGVLNIVHGT-NDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMPD 457 (1035)
Q Consensus 379 ta~~L~ell~eAGlP~gvv~vV~g~-~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~l~Pv~lElGGknp~IV~~d 457 (1035)
++..|+++|.++|+|+|+||+|+|+ .+.+..|+.|+++++|+||||..+|+.|++.++++++|+++|+|||||+||++|
T Consensus 161 ~~~~l~~~l~~aglP~~vv~~v~g~~~~~~~~l~~~~~i~~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~iV~~d 240 (457)
T cd07114 161 STLELAKLAEEAGFPPGVVNVVTGFGPETGEALVEHPLVAKIAFTGGTETGRHIARAAAENLAPVTLELGGKSPNIVFDD 240 (457)
T ss_pred HHHHHHHHHHHcCcCCCcEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEecCCCCeeEECCC
Confidence 9999999999999999999999985 467889999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHhcccccCCCCCCCcCCCcCHHHHHHHHHHHHHH
Q 001665 458 ASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNA 536 (1035)
Q Consensus 458 ADld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d~~~~~Gpli~~~~~~rl~~~i~~a 536 (1035)
||++.|++.|++++|+++||.|+++++|||+++++ +|+++|+++++++++|+|.++++++||++++.+++++.++|+++
T Consensus 241 Adl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a 320 (457)
T cd07114 241 ADLDAAVNGVVAGIFAAAGQTCVAGSRLLVQRSIYDEFVERLVARARAIRVGDPLDPETQMGPLATERQLEKVERYVARA 320 (457)
T ss_pred CCHHHHHHHHHHHHHhccCCCCCCCceEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999998 99999999999999999999999999999999999999999999
Q ss_pred HHCCCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecCCHHHHHHHHHhcCCCcEEEEEcCCH
Q 001665 537 VDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSG 616 (1035)
Q Consensus 537 v~~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI~laN~~~~GLsasVfS~d~ 616 (1035)
+++|+++++||.....+....|.|++|||+.++++++.+++||+||||++|++|+|+||||+++|+++|||++||||+|.
T Consensus 321 ~~~ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~ift~d~ 400 (457)
T cd07114 321 REEGARVLTGGERPSGADLGAGYFFEPTILADVTNDMRIAQEEVFGPVLSVIPFDDEEEAIALANDSEYGLAAGIWTRDL 400 (457)
T ss_pred HHCCCEEEeCCCccccccCCCCCEECCEEEeCCCCCChhhhcCCcCceEEEeccCCHHHHHHHhhCCCcCceeEEECCCH
Confidence 99999999999753322224689999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccceeEEEEcCCcC----CCCCCCCCCCCCCcCcHHHHHhcceeeEEE
Q 001665 617 LAARKFQNEIEARLVGINVPVP----SSFSSINESGEFNFCGKSGVQFYTQIKTVA 668 (1035)
Q Consensus 617 ~~a~~~a~~l~sG~V~IN~~~~----~PfGG~g~SG~G~~~G~~g~~~ft~~k~v~ 668 (1035)
+.+++++.++++|+|+||+... +||||+|.||+|+++|.+++++|++.|+++
T Consensus 401 ~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~k~SG~G~~~g~~~~~~f~~~k~~~ 456 (457)
T cd07114 401 ARAHRVARAIEAGTVWVNTYRALSPSSPFGGFKDSGIGRENGIEAIREYTQTKSVW 456 (457)
T ss_pred HHHHHHHHhcCcceEEECCCCCCCCCCCCCCCccCcCCccchHHHHHHHhceeEEe
Confidence 9999999999999999998632 899999999999999999999999999875
|
Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. |
| >cd07099 ALDH_DDALDH Methylomonas sp | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-82 Score=747.28 Aligned_cols=442 Identities=30% Similarity=0.433 Sum_probs=416.3
Q ss_pred ecCCCCCeEEEecCCCHHHHHHHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHH
Q 001665 222 INPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVL 301 (1035)
Q Consensus 222 ~nP~tGevi~~v~~~s~~dv~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e~La~~i~~etGk~~~eA~~EV~ 301 (1035)
+||+||+++++++.++.+++++++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+||+..++..|+.
T Consensus 1 ~~P~t~~~~~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~ev~ 80 (453)
T cd07099 1 RNPATGEVLGEVPVTDPAEVAAAVARARAAQRAWAALGVEGRAQRLLRWKRALADHADELAELLHAETGKPRADAGLEVL 80 (453)
T ss_pred CCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhcCc-cccCC--CCCCcceeeeccceeEEEECCCCcchhchHHHHHHHHhcCCEEEEeCCCCChh
Q 001665 302 FGLEVVEQACAVATLQIGE-FVPNA--LCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPG 378 (1035)
Q Consensus 302 ~a~~~l~~~~~~a~~~~g~-~~~~~--~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~ALaaGNaVVlKPS~~ap~ 378 (1035)
.+++.++++++.+....+. ..... ..+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~l~~ALaaGN~vilKps~~~p~ 160 (453)
T cd07099 81 LALEAIDWAARNAPRVLAPRKVPTGLLMPNKKATVEYRPYGVVGVISPWNYPLLTPMGDIIPALAAGNAVVLKPSEVTPL 160 (453)
T ss_pred HHHHHHHHHHHHHHHhcCCccccCcccCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCccchH
Confidence 9999999998876554332 22211 23556788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCCcEEEeecchhhHhhhhcCCCccEEEEeccchHHHHHHHHHHhcCCceeecCCCcceEEEcCCC
Q 001665 379 TSMILAALAMEAGLPDGVLNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMPDA 458 (1035)
Q Consensus 379 ta~~L~ell~eAGlP~gvv~vV~g~~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~l~Pv~lElGGknp~IV~~dA 458 (1035)
++.+|+++|.++|+|+|+|++|+|+.+.+..|+.| .+|+|+||||+.+|+.|++.++++++|+++|+|||||+||++||
T Consensus 161 ~~~~l~~~l~~ag~P~g~~~vv~g~~~~~~~l~~~-~vd~V~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~p~iV~~da 239 (453)
T cd07099 161 VGELLAEAWAAAGPPQGVLQVVTGDGATGAALIDA-GVDKVAFTGSVATGRKVMAAAAERLIPVVLELGGKDPMIVLADA 239 (453)
T ss_pred HHHHHHHHHHHcCCCCCeEEEEeCCchHHHHHhcC-CCCEEEEECCHHHHHHHHHHHHhcCCeEEEECCCCCeEEECCCC
Confidence 99999999999999999999999977888899987 69999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHhcccccCCCCCCCcCCCcCHHHHHHHHHHHHHHH
Q 001665 459 SIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAV 537 (1035)
Q Consensus 459 Dld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d~~~~~Gpli~~~~~~rl~~~i~~av 537 (1035)
|++.|++.|++++|.++||.|+++++||||++++ +|+++|+++++++++|+|.++++++||++++.+++++.+++++++
T Consensus 240 dl~~a~~~i~~~~~~~~GQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~l~~G~~~~~~~~~gp~i~~~~~~~~~~~i~~a~ 319 (453)
T cd07099 240 DLERAAAAAVWGAMVNAGQTCISVERVYVHESVYDEFVARLVAKARALRPGADDIGDADIGPMTTARQLDIVRRHVDDAV 319 (453)
T ss_pred CHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCcccCCcCHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999998 999999999999999999999999999999999999999999999
Q ss_pred HCCCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecCCHHHHHHHHHhcCCCcEEEEEcCCHH
Q 001665 538 DNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGL 617 (1035)
Q Consensus 538 ~~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI~laN~~~~GLsasVfS~d~~ 617 (1035)
++||++++||... ...|.|++|||+.++.++|.+++||+||||++|++|+|+||||+++|+++|||++||||+|.+
T Consensus 320 ~~ga~~~~gg~~~----~~~g~~~~Ptil~~~~~~~~~~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~ 395 (453)
T cd07099 320 AKGAKALTGGARS----NGGGPFYEPTVLTDVPHDMDVMREETFGPVLPVMPVADEDEAIALANDSRYGLSASVFSRDLA 395 (453)
T ss_pred hCCCEEEeCCCcC----CCCCeEEecEEEecCCCCCHHHhCCCcCCeeEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCHH
Confidence 9999999998742 136899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhccceeEEEEcCCc------CCCCCCCCCCCCCCcCcHHHHHhcceeeEEE
Q 001665 618 AARKFQNEIEARLVGINVPV------PSSFSSINESGEFNFCGKSGVQFYTQIKTVA 668 (1035)
Q Consensus 618 ~a~~~a~~l~sG~V~IN~~~------~~PfGG~g~SG~G~~~G~~g~~~ft~~k~v~ 668 (1035)
.++++++++++|.|+||+.. .+||||+|.||+|+++|.+++++||+.|+++
T Consensus 396 ~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~g~~~g~~~~~~~t~~k~v~ 452 (453)
T cd07099 396 RAEAIARRLEAGAVSINDVLLTAGIPALPFGGVKDSGGGRRHGAEGLREFCRPKAIA 452 (453)
T ss_pred HHHHHHHhCCeeeEEECCCCCCCCCCCCCCCCcccccCCccChHHHHHHhcceEEEe
Confidence 99999999999999999762 2899999999999999999999999999975
|
4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. |
| >TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-82 Score=772.31 Aligned_cols=458 Identities=22% Similarity=0.282 Sum_probs=416.2
Q ss_pred cceEEcCEEecCCCCCeEEeecCCCCCeEEEecCCCHHHHHHHHHHHHHh-hHhhhCCCHHHHHHHHHHHHHHHHHhHHH
Q 001665 202 VSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRA-FPAWKNTPVATRQRIMFKLQELIRRDIDK 280 (1035)
Q Consensus 202 ~~~~I~G~~~~~~~~~~~~v~nP~tGevi~~v~~~s~~dv~~av~~Ar~A-~~~W~~~s~~~R~~iL~~la~~L~~~~e~ 280 (1035)
+++||||+|+.+. +..++++||+||+++++++.++ +|+++||++|++| |+.|+.++.++|.++|++++++|+++.++
T Consensus 1 ~~~~i~g~~~~~~-~~~~~v~nP~tg~~i~~~~~~~-~dv~~Av~~A~~aa~~~W~~~~~~eR~~~L~~~a~~l~~~~~e 78 (663)
T TIGR02278 1 LQSYLSGEWRTGQ-GEGVPVRDASTGEVLARVTSEG-LDVAAAVAWAREVGGPALRALTFHERARMLKALAQYLSERKEA 78 (663)
T ss_pred CceeECCEEEcCC-CCeEeccCCCCCCEEEEEcCCc-HHHHHHHHHHHHhcchhhhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 3679999999763 5679999999999999999999 6999999999996 99999999999999999999999999999
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhhc--------CccccCCCCC-Ccceeeeccc-eeEEEECCCCcc
Q 001665 281 LAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQI--------GEFVPNALCG-LDTYCFREPL-GVCAGICPFNFP 350 (1035)
Q Consensus 281 La~~i~~etGk~~~eA~~EV~~a~~~l~~~~~~a~~~~--------g~~~~~~~~g-~~~~~~~ePl-GVV~iI~P~N~P 350 (1035)
|++ +++|+||++.+++.|+..+++.+++++..+.... ++..+....+ ...++.++|+ |||++|+|||||
T Consensus 79 la~-~~~e~GK~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~Gvv~~I~pwN~P 157 (663)
T TIGR02278 79 LYA-LAATTGATRRDNWVDIDGGIGTLFTYSSLGRRELPDANLIPEDEFEPLSKDGSFQGRHILTPKGGVAVQINAFNFP 157 (663)
T ss_pred HHH-HHHHcCCCHHHHHHHHHHHHHHHHHHHHhhhhhccccccccCCceeccCCCCccceEEEEEeCCceEEEEcCCchH
Confidence 999 5999999999999999999999999998776521 3322221112 2457889997 999999999999
Q ss_pred hhchHHHHHHHHhcCCEEEEeCCCCChhHHHHHHHHHHHhC-CCCCcEEEeecchhhHhhhhcCCCccEEEEeccchHHH
Q 001665 351 DMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAG-LPDGVLNIVHGTNDVINHICDDEDIKAISFVASSTASV 429 (1035)
Q Consensus 351 l~~~~~~l~~ALaaGNaVVlKPS~~ap~ta~~L~ell~eAG-lP~gvv~vV~g~~e~~~~L~~h~~vd~V~fTGS~~vG~ 429 (1035)
+.++++++++||++||+||+|||+.+|+++.+|+++|.++| +|+|+||+|+|+.. ..+..++++++|+||||+.+|+
T Consensus 158 ~~~~~~~~~~ALaaGN~Vv~KPs~~tp~~~~~l~~~~~~aG~lP~gv~~~v~g~~~--~~~~~~~~~~~V~FTGS~~~G~ 235 (663)
T TIGR02278 158 VWGLLEKFAPAFLAGVPTLAKPATPTAYVAEALVRTMVESGLLPEGSLQLICGSAG--DLLDHLDHRDVVAFTGSAATAD 235 (663)
T ss_pred HHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCcEEEEeCChH--HHHhcCCCCCEEEEECCHHHHH
Confidence 99999999999999999999999999999999999999999 99999999998532 2222236789999999999999
Q ss_pred HHHHHH--HhcCCceeecCCCcceEEEcCCCC-----HHHHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHH
Q 001665 430 QMYARA--AARGKRVQSNRGGKNYAIIMPDAS-----IDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVEL 501 (1035)
Q Consensus 430 ~I~~aA--a~~l~Pv~lElGGknp~IV~~dAD-----ld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~ 501 (1035)
.|++.+ +++++|+++|||||||+||++||| ++.|++.+++++|.|+||.|+++++|||+++++ +|+++|+++
T Consensus 236 ~i~~~aaaa~~~~~~~lELGGk~p~IV~~dAd~~~~dl~~aa~~i~~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~l~~~ 315 (663)
T TIGR02278 236 RLRAHPNVLERGIRFNAEADSLNAAILGEDATPDEPEFDLFAQEIVRELTIKAGQKCTAIRRVIVPKALLEAVLKALQAR 315 (663)
T ss_pred HHHHhHhHHhcCceEEEEcCCCCeEEEcCCCCccchhHHHHHHHHHHHHHhcCCCCccCCceEEEeHHHHHHHHHHHHHH
Confidence 999874 478999999999999999999999 999999999999999999999999999999998 999999999
Q ss_pred HHhcccccCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCcEeeCCcccccCCCCCCceeeceEEecCCCCC-ccccccc
Q 001665 502 AKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNM-ECYKEEI 580 (1035)
Q Consensus 502 ~~~lkvG~p~d~~~~~Gpli~~~~~~rl~~~i~~av~~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~-~i~~eEi 580 (1035)
++++++|+|.++++++|||+++.+++++.++|++|+++|+++++||.. ..+|+|++||||.+++++| .+++||+
T Consensus 316 ~~~l~vG~p~~~~t~~Gpli~~~~~~~i~~~i~~a~~~Ga~vl~GG~~-----~~~g~~~~PTvl~~~~~~~~~i~~eE~ 390 (663)
T TIGR02278 316 LAKVVLGDPREEGVDMGPLVSLEQRADVEAAVAALLAAGAEVRLGGPG-----RLDGAFFPPTLLLAEDPWAGAVHATEA 390 (663)
T ss_pred HHhccCCCccccCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCc-----CCCCeeEccEEEeeCCcchhhHHhccc
Confidence 999999999999999999999999999999999999999999999863 2358999999999998876 7999999
Q ss_pred cCcceeEEecCCHHHHHHHHHhcCCCcEEEEEcCCHHHHHHHHhcc--ceeEEEE-cC--------C----cCCCCCCCC
Q 001665 581 FGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEI--EARLVGI-NV--------P----VPSSFSSIN 645 (1035)
Q Consensus 581 FGPVL~V~~~~d~eeAI~laN~~~~GLsasVfS~d~~~a~~~a~~l--~sG~V~I-N~--------~----~~~PfGG~g 645 (1035)
||||++|++|+|++|||+++|+++|||++||||+|.+.++++++++ ++|.|+| |. . ..+||||+|
T Consensus 391 FGPVl~V~~~~~~~eai~~aN~~~~gL~a~vft~d~~~~~~~~~~l~~~~G~v~InN~~~~~~~~~~~~~~~~~pfGG~k 470 (663)
T TIGR02278 391 FGPVATFFPYGDRAEAARLAARGGGSLVATLATSDPEEARQFILGLAPYHGRLHILNRDDAAESTGHGSPLPRLLHGGPG 470 (663)
T ss_pred cCCeEEEEeeCCHHHHHHHHHcCCCCceEEEEeCCHHHHHHHHHHHHhhCCEEEECCCcccccccCCCCCCCCCCCCCCc
Confidence 9999999999999999999999999999999999999999999999 8999999 74 1 127999999
Q ss_pred CCCCCCc-CcHHHHHhcceeeEEEE
Q 001665 646 ESGEFNF-CGKSGVQFYTQIKTVAQ 669 (1035)
Q Consensus 646 ~SG~G~~-~G~~g~~~ft~~k~v~~ 669 (1035)
.||+|++ +|.+++++|++.|++..
T Consensus 471 ~SG~G~~~g~~~~l~~f~~~k~v~~ 495 (663)
T TIGR02278 471 RAGGGEELGGLRSVKHYMQRTAIQG 495 (663)
T ss_pred cCcCCCccchHHHHHHhceeEEEEc
Confidence 9999999 56899999999999864
|
This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species. |
| >TIGR01238 D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-82 Score=750.31 Aligned_cols=452 Identities=23% Similarity=0.334 Sum_probs=418.6
Q ss_pred CCCccceEEcCEEecCCCCCeEEeecCCCC-CeEEEecCCCHHHHHHHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHH
Q 001665 198 DNNRVSNFIGGKFVDLRGSATIDVINPATQ-EVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRR 276 (1035)
Q Consensus 198 ~~~~~~~~I~G~~~~~~~~~~~~v~nP~tG-evi~~v~~~s~~dv~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~ 276 (1035)
.+..+|+||||+|+. ++..++++||+|| ++|++++.++.+|+++|++.|++||+.|+.++.++|.++|++++++|++
T Consensus 34 ~~~~~~~~i~g~~~~--~~~~~~~~nP~t~~e~i~~~~~~~~~dv~~av~~A~~a~~~W~~~~~~~R~~~L~~~a~~l~~ 111 (500)
T TIGR01238 34 KTWQAAPIIGHSYKA--DGEAQPVTNPADRRDIVGQVFHANLAHVQAAIDSAQQAFPTWNATPAKERAAKLDRLADLLEL 111 (500)
T ss_pred CceecCceECCEEec--CCCeEEeeCCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHh
Confidence 345679999999987 4678999999996 8999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCccccCCCCCCcceeeeccceeEEEECCCCcchhchHH
Q 001665 277 DIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLW 356 (1035)
Q Consensus 277 ~~e~La~~i~~etGk~~~eA~~EV~~a~~~l~~~~~~a~~~~g~~~~~~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~ 356 (1035)
+.++|++++++|+||++.++..|+..+++.++++++......+ ...++|+|||++|+|||||+.++++
T Consensus 112 ~~~ela~~~~~e~Gk~~~~a~~ev~~~i~~l~~~a~~~~~~~~------------~~~~~P~GVV~~I~pwN~P~~~~~~ 179 (500)
T TIGR01238 112 HMPELMALCVREAGKTIHNAIAEVREAVDFCRYYAKQVRDVLG------------EFSVESRGVFVCISPWNFPLAIFTG 179 (500)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcC------------ceeccCcceEEEECCCchHHHHHHH
Confidence 9999999999999999999999999999999999876643321 1368999999999999999999999
Q ss_pred HHHHHHhcCCEEEEeCCCCChhHHHHHHHHHHHhCCCCCcEEEeecch-hhHhhhhcCCCccEEEEeccchHHHHHHHHH
Q 001665 357 MFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGTN-DVINHICDDEDIKAISFVASSTASVQMYARA 435 (1035)
Q Consensus 357 ~l~~ALaaGNaVVlKPS~~ap~ta~~L~ell~eAGlP~gvv~vV~g~~-e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aA 435 (1035)
++++||++||+||+|||+.+|.++..++++|.++|+|+|+||+|+|+. +.+..|+.|+++++|+||||+.+|+.|++.|
T Consensus 180 ~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~v~~~a 259 (500)
T TIGR01238 180 QISAALAAGNTVIAKPAEQTSLIAYRAVELMQEAGFPAGTIQLLPGRGADVGAALTSDPRIAGVAFTGSTEVAQLINQTL 259 (500)
T ss_pred HHHHHHHcCCEEEEeCCCCccHHHHHHHHHHHHcCCCCCceEEEecCcchHHHHHhcCCCcCeEEEECCHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999854 7889999999999999999999999999999
Q ss_pred HhcC---CceeecCCCcceEEEcCCCCHHHHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHhcccccCC
Q 001665 436 AARG---KRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGT 511 (1035)
Q Consensus 436 a~~l---~Pv~lElGGknp~IV~~dADld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~ 511 (1035)
++++ +|+++|+|||||+||++|||++.|++.|++++|.|+||.|+++++|||+++++ +|+++|+++++++++|+|.
T Consensus 260 a~~~~~~~~v~lElGGknp~IV~~dAdld~Aa~~i~~~~f~nsGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~vG~p~ 339 (500)
T TIGR01238 260 AQREDAPVPLIAETGGQNAMIVDSTALPEQVVRDVLRSAFDSAGQRCSALRVLCVQEDVADRVLTMIQGAMQELKVGVPH 339 (500)
T ss_pred hhcccCCceEEEecCCcCcEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceeEEcHhhHHHHHHHHHHHHHhCCCCCCC
Confidence 9886 79999999999999999999999999999999999999999999999999998 8999999999999999999
Q ss_pred CCCCCcCCCcCHHHHHHHHHHHHHHHHCCCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecC
Q 001665 512 DASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQAD 591 (1035)
Q Consensus 512 d~~~~~Gpli~~~~~~rl~~~i~~av~~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~ 591 (1035)
++++++||++++.+++++.++|+++++.|++++.++... ......|+|++|||+.+ +++.+++||+||||++|++|+
T Consensus 340 ~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~l~~~~~~~-~~~~~~g~f~~PTvl~~--~~~~~~~eE~FgPvl~v~~~~ 416 (500)
T TIGR01238 340 LLTTDVGPVIDAEAKQNLLAHIEHMSQTQKKIAQLTLDD-SRACQHGTFVAPTLFEL--DDIAELSEEVFGPVLHVVRYK 416 (500)
T ss_pred CCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeeccCC-CCCCCCCeeEcCEEEcc--CCchHhhCCCcCCEEEEEEeC
Confidence 999999999999999999999999999999987543210 01123689999999973 688999999999999999998
Q ss_pred --CHHHHHHHHHhcCCCcEEEEEcCCHHHHHHHHhccceeEEEEcCCc-----C-CCCCCCCCCCCC-CcCcHHHHHhcc
Q 001665 592 --SLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPV-----P-SSFSSINESGEF-NFCGKSGVQFYT 662 (1035)
Q Consensus 592 --d~eeAI~laN~~~~GLsasVfS~d~~~a~~~a~~l~sG~V~IN~~~-----~-~PfGG~g~SG~G-~~~G~~g~~~ft 662 (1035)
++||||+++|+++|||+++|||+|.+.+.++++++++|.|+||+.. . +||||+|.||+| +.+|.+++++|+
T Consensus 417 ~~~~deai~~~N~~~~gLs~~vfT~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~gg~~~~~~~~ 496 (500)
T TIGR01238 417 ARELDQIVDQINQTGYGLTMGVHSRIETTYRWIEKHARVGNCYVNRNQVGAVVGVQPFGGQGLSGTGPKAGGPHYLYRLT 496 (500)
T ss_pred CCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCCccCCHHHHHHHH
Confidence 7999999999999999999999999999999999999999999753 2 699999999999 799999999999
Q ss_pred eeeE
Q 001665 663 QIKT 666 (1035)
Q Consensus 663 ~~k~ 666 (1035)
+.|+
T Consensus 497 ~~k~ 500 (500)
T TIGR01238 497 QVQY 500 (500)
T ss_pred hhcC
Confidence 9763
|
This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase. |
| >cd07092 ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-82 Score=744.49 Aligned_cols=442 Identities=30% Similarity=0.448 Sum_probs=414.5
Q ss_pred eecCCCCCeEEEecCCCHHHHHHHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HH
Q 001665 221 VINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQ-RD 299 (1035)
Q Consensus 221 v~nP~tGevi~~v~~~s~~dv~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e~La~~i~~etGk~~~eA~-~E 299 (1035)
++||+||++|++++.++.+|++++++.|++||+.|+.++.++|.++|++++++|+++.++|++++++|+||+..++. .|
T Consensus 1 ~~~P~t~~~i~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~~~~l~~~~~~l~~~~~~e~Gk~~~~~~~~e 80 (450)
T cd07092 1 VVDPATGEEIATVPDASAADVDAAVAAAHAAFPSWRRTTPAERSKALLKLADAIEENAEELAALESRNTGKPLHLVRDDE 80 (450)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999998764 59
Q ss_pred HHHHHHHHHHHHHHHHhhcCccccCCCCCCcceeeeccceeEEEECCCCcchhchHHHHHHHHhcCCEEEEeCCCCChhH
Q 001665 300 VLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGT 379 (1035)
Q Consensus 300 V~~a~~~l~~~~~~a~~~~g~~~~~~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~ALaaGNaVVlKPS~~ap~t 379 (1035)
+..+++.+++++..+....+........+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.+
T Consensus 81 v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~VIlKps~~~~~~ 160 (450)
T cd07092 81 LPGAVDNFRFFAGAARTLEGPAAGEYLPGHTSMIRREPIGVVAQIAPWNYPLMMAAWKIAPALAAGNTVVLKPSETTPLT 160 (450)
T ss_pred HHHHHHHHHHHHHHHHHhcCcccCccCCCceeEEEEeccceEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCccchHH
Confidence 99999999998877665544322222234456788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCCCcEEEeecch-hhHhhhhcCCCccEEEEeccchHHHHHHHHHHhcCCceeecCCCcceEEEcCCC
Q 001665 380 SMILAALAMEAGLPDGVLNIVHGTN-DVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMPDA 458 (1035)
Q Consensus 380 a~~L~ell~eAGlP~gvv~vV~g~~-e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~l~Pv~lElGGknp~IV~~dA 458 (1035)
+.+|+++|.+ |+|+|++|+|+|+. +.+..|+.|+++++|+||||+.+|+.|+++++++++|+++|+|||||+||++||
T Consensus 161 ~~~l~~~~~~-glP~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~a~~~~~~~~lelgG~~p~iV~~dA 239 (450)
T cd07092 161 TLLLAELAAE-VLPPGVVNVVCGGGASAGDALVAHPRVRMVSLTGSVRTGKKVARAAADTLKRVHLELGGKAPVIVFDDA 239 (450)
T ss_pred HHHHHHHHHh-cCCcccEEEeecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCcEEEECCCCCeeEECCCC
Confidence 9999999999 99999999999865 478899999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHhcccccCCCCCCCcCCCcCHHHHHHHHHHHHHHH
Q 001665 459 SIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAV 537 (1035)
Q Consensus 459 Dld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d~~~~~Gpli~~~~~~rl~~~i~~av 537 (1035)
|++.|++.|++++|+|+||.|+++++|||+++++ +|+++|+++++++++|+|.++++++||++++.+++++.++|++++
T Consensus 240 dl~~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~i~~~i~~a~ 319 (450)
T cd07092 240 DLDAAVAGIATAGYYNAGQDCTAACRVYVHESVYDEFVAALVEAVSAIRVGDPDDEDTEMGPLNSAAQRERVAGFVERAP 319 (450)
T ss_pred CHHHHHHHHHHHHHhhCCCCCCCCcEEEEeHHHHHHHHHHHHHHHhhCCcCCCCCCCCccCcccCHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999998 999999999999999999999999999999999999999999998
Q ss_pred HCCCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecCCHHHHHHHHHhcCCCcEEEEEcCCHH
Q 001665 538 DNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGL 617 (1035)
Q Consensus 538 ~~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI~laN~~~~GLsasVfS~d~~ 617 (1035)
+|+++++||... ...|+|++|||+.++++++.+++||+||||++|++|+|+||||+++|+.+|||++||||+|.+
T Consensus 320 -~ga~~~~gg~~~----~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~vft~d~~ 394 (450)
T cd07092 320 -AHARVLTGGRRA----EGPGYFYEPTVVAGVAQDDEIVQEEIFGPVVTVQPFDDEDEAIELANDVEYGLASSVWTRDVG 394 (450)
T ss_pred -cCCEEEeCCCCC----CCCccEEeeEEEEcCCCCChHHhCCCcCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCHH
Confidence 999999999742 236899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhccceeEEEEcCCcC----CCCCCCCCCCCCCcCcHHHHHhcceeeEEE
Q 001665 618 AARKFQNEIEARLVGINVPVP----SSFSSINESGEFNFCGKSGVQFYTQIKTVA 668 (1035)
Q Consensus 618 ~a~~~a~~l~sG~V~IN~~~~----~PfGG~g~SG~G~~~G~~g~~~ft~~k~v~ 668 (1035)
.++++++++++|.|+||+... +||||+|.||+|+++|.+++++||+.|++.
T Consensus 395 ~~~~~~~~l~~g~v~iN~~~~~~~~~PfgG~~~SG~G~~~g~~~~~~~~~~k~~~ 449 (450)
T cd07092 395 RAMRLSARLDFGTVWVNTHIPLAAEMPHGGFKQSGYGKDLSIYALEDYTRIKHVM 449 (450)
T ss_pred HHHHHHHhcCccEEEECCCCCCCCCCCcCCcccCcCCCCChHHHHHHHheeeEEe
Confidence 999999999999999997632 899999999999999999999999999875
|
NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. |
| >cd07152 ALDH_BenzADH NAD-dependent benzaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-82 Score=742.44 Aligned_cols=434 Identities=28% Similarity=0.412 Sum_probs=410.2
Q ss_pred CCeEEEecCCCHHHHHHHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHH
Q 001665 227 QEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEV 306 (1035)
Q Consensus 227 Gevi~~v~~~s~~dv~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e~La~~i~~etGk~~~eA~~EV~~a~~~ 306 (1035)
|+++++++.++.+++++++++|++||+.|+.++.++|.++|++++++|+++.++|++++++|+||+..++..|+..+++.
T Consensus 1 ~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ev~~~i~~ 80 (443)
T cd07152 1 GAVLGEVGVADAADVDRAAARAAAAQRAWAATPPRERAAVLRRAADLLEEHADEIADWIVRESGSIRPKAGFEVGAAIGE 80 (443)
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHHHHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcCccccCCCCCCcceeeeccceeEEEECCCCcchhchHHHHHHHHhcCCEEEEeCCCCChhHH-HHHHH
Q 001665 307 VEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTS-MILAA 385 (1035)
Q Consensus 307 l~~~~~~a~~~~g~~~~~~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~ALaaGNaVVlKPS~~ap~ta-~~L~e 385 (1035)
+++++..+....+...+. ..+...+.+++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++ .+|++
T Consensus 81 l~~~~~~~~~~~~~~~~~-~~g~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~~l~~ 159 (443)
T cd07152 81 LHEAAGLPTQPQGEILPS-APGRLSLARRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDPRTPVSGGVVIAR 159 (443)
T ss_pred HHHHHHhHHHhCCccccc-cCCceeEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCcccchhHHHHHHH
Confidence 999987665444433222 2455567899999999999999999999999999999999999999999999996 78999
Q ss_pred HHHHhCCCCCcEEEeecchhhHhhhhcCCCccEEEEeccchHHHHHHHHHHhcCCceeecCCCcceEEEcCCCCHHHHHH
Q 001665 386 LAMEAGLPDGVLNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMPDASIDATLN 465 (1035)
Q Consensus 386 ll~eAGlP~gvv~vV~g~~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~l~Pv~lElGGknp~IV~~dADld~Aa~ 465 (1035)
+|.++|+|+|++|+|+|+.+.+..|+.|+++++|+||||+.+|+.|+++++++++|+++|+|||||+||++|||++.|++
T Consensus 160 ~~~~ag~P~gvv~~v~g~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~dAdl~~aa~ 239 (443)
T cd07152 160 LFEEAGLPAGVLHVLPGGADAGEALVEDPNVAMISFTGSTAVGRKVGEAAGRHLKKVSLELGGKNALIVLDDADLDLAAS 239 (443)
T ss_pred HHHHhCcCcCcEEEecCChHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCcEEEECCCCCeEEECCCCCHHHHHH
Confidence 99999999999999999778889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHhcccccCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCcEe
Q 001665 466 ALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLL 544 (1035)
Q Consensus 466 ~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d~~~~~Gpli~~~~~~rl~~~i~~av~~GAkvl 544 (1035)
.|++++|+|+||.|+++++|||+++++ +|+++|+++++++++|+|.++++++||++++.+++++.++|++++++|++++
T Consensus 240 ~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~vl 319 (443)
T cd07152 240 NGAWGAFLHQGQICMAAGRHLVHESVADAYTAKLAAKAKHLPVGDPATGQVALGPLINARQLDRVHAIVDDSVAAGARLE 319 (443)
T ss_pred HHHHHHHhhcCCCCcCCeeEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHhCCCEEE
Confidence 999999999999999999999999998 9999999999999999999999999999999999999999999999999999
Q ss_pred eCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecCCHHHHHHHHHhcCCCcEEEEEcCCHHHHHHHHh
Q 001665 545 LDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQN 624 (1035)
Q Consensus 545 ~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI~laN~~~~GLsasVfS~d~~~a~~~a~ 624 (1035)
+||.. .|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+++.++++
T Consensus 320 ~gg~~-------~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~t~d~~~a~~~~~ 392 (443)
T cd07152 320 AGGTY-------DGLFYRPTVLSGVKPGMPAFDEEIFGPVAPVTVFDSDEEAVALANDTEYGLSAGIISRDVGRAMALAD 392 (443)
T ss_pred eccCc-------CCEEEcCEEEecCCCCChhhhccccCCeEEEEeeCCHHHHHHHHhCCCccceEEEECCCHHHHHHHHH
Confidence 99852 47899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceeEEEEcCCc-----CCCCCCCCCCCCC-CcCcHHHHHhcceeeEEE
Q 001665 625 EIEARLVGINVPV-----PSSFSSINESGEF-NFCGKSGVQFYTQIKTVA 668 (1035)
Q Consensus 625 ~l~sG~V~IN~~~-----~~PfGG~g~SG~G-~~~G~~g~~~ft~~k~v~ 668 (1035)
++++|.|+||+.. .+||||+|.||+| +.+|.+|+++|++.|+++
T Consensus 393 ~l~~G~v~iN~~~~~~~~~~pfGG~~~SG~G~~~~g~~~l~~~~~~k~~~ 442 (443)
T cd07152 393 RLRTGMLHINDQTVNDEPHNPFGGMGASGNGSRFGGPANWEEFTQWQWVT 442 (443)
T ss_pred hCCcCeEEECCCCCCCCCCCCCCCcccccCCCccCcHHHHHHhhceeEEe
Confidence 9999999999752 2899999999999 788999999999999875
|
NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. |
| >PRK11903 aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-82 Score=750.50 Aligned_cols=463 Identities=20% Similarity=0.246 Sum_probs=414.4
Q ss_pred CccceEEcCEEecCCCCCeEEeecCCCCCeEEEecCCCHHHHHHHHHHHHHhh-HhhhCCCHHHHHHHHHHHHHHHHHhH
Q 001665 200 NRVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAF-PAWKNTPVATRQRIMFKLQELIRRDI 278 (1035)
Q Consensus 200 ~~~~~~I~G~~~~~~~~~~~~v~nP~tGevi~~v~~~s~~dv~~av~~Ar~A~-~~W~~~s~~~R~~iL~~la~~L~~~~ 278 (1035)
..+++||||+|+.+. +..++++||+||+++++++. +.+|+++||++|++|| +.|+.++.++|.++|++++++|++++
T Consensus 3 ~~~~~~i~G~~~~~~-~~~~~~~nP~tge~l~~v~~-~~~dv~~Av~aA~~A~~~~W~~~~~~eR~~~L~~~a~~l~~~~ 80 (521)
T PRK11903 3 ELLANYVAGRWQAGS-GAGTPLFDPVTGEELVRVSA-TGLDLAAAFAFAREQGGAALRALTYAQRAALLAAIVKVLQANR 80 (521)
T ss_pred chhhhhCCCEEEcCC-CCeeeeECCCCCCEEEEecC-ChHHHHHHHHHHHHhhhhhhhhCCHHHHHHHHHHHHHHHHHHH
Confidence 455789999999753 46799999999999999997 8899999999999995 99999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCccccCCC--------CCCcceeeecc-ceeEEEECCCCc
Q 001665 279 DKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVPNAL--------CGLDTYCFREP-LGVCAGICPFNF 349 (1035)
Q Consensus 279 e~La~~i~~etGk~~~eA~~EV~~a~~~l~~~~~~a~~~~g~~~~~~~--------~g~~~~~~~eP-lGVV~iI~P~N~ 349 (1035)
++|++++++|+||++.+++.|+..+++.+++++.++....+....... ......+.++| +|||++|+||||
T Consensus 81 ~ela~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~pwN~ 160 (521)
T PRK11903 81 DAYYDIATANSGTTRNDSAVDIDGGIFTLGYYAKLGAALGDARLLRDGEAVQLGKDPAFQGQHVLVPTRGVALFINAFNF 160 (521)
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCccccccccccccceEEEecCcceEEEECCcch
Confidence 999999999999999999999999999999999877655432111100 12224567899 699999999999
Q ss_pred chhchHHHHHHHHhcCCEEEEeCCCCChhHHHHHHHHHHHhC-CCCCcEEEeecch-hhHhhhhcCCCccEEEEeccchH
Q 001665 350 PDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAG-LPDGVLNIVHGTN-DVINHICDDEDIKAISFVASSTA 427 (1035)
Q Consensus 350 Pl~~~~~~l~~ALaaGNaVVlKPS~~ap~ta~~L~ell~eAG-lP~gvv~vV~g~~-e~~~~L~~h~~vd~V~fTGS~~v 427 (1035)
|+.++++++++||++||+||+|||+.+|+++..|++++.++| +|+|+||+|+|+. +.+..| +++++|+||||+.+
T Consensus 161 P~~~~~~~~~~ALaaGN~VV~KPs~~tp~~~~~l~~~~~~ag~lP~gv~~~v~g~~~~~~~~l---~~v~~v~fTGS~~~ 237 (521)
T PRK11903 161 PAWGLWEKAAPALLAGVPVIVKPATATAWLTQRMVKDVVAAGILPAGALSVVCGSSAGLLDHL---QPFDVVSFTGSAET 237 (521)
T ss_pred HHHHHHHHHHHHHHcCCeEEEEcCCcChHHHHHHHHHHHHhCCCCcCceEEeeCCchHHHhcc---cCCCEEEEECCHHH
Confidence 999999999999999999999999999999999999999999 9999999999854 444444 68999999999999
Q ss_pred HHHHHHHH--HhcCCceeecCCCcceEEEcCCCC-----HHHHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHHH
Q 001665 428 SVQMYARA--AARGKRVQSNRGGKNYAIIMPDAS-----IDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELV 499 (1035)
Q Consensus 428 G~~I~~aA--a~~l~Pv~lElGGknp~IV~~dAD-----ld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv 499 (1035)
|+.|++.+ +.+++|+++|||||||+||++||| ++.|++.+++++|.|+||.|+++++|||+++++ +|+++|+
T Consensus 238 G~~v~~~aa~~~~~~~~~lElGGknp~IV~~dAd~~~~~~~~aa~~i~~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~L~ 317 (521)
T PRK11903 238 AAVLRSHPAVVQRSVRVNVEADSLNSALLGPDAAPGSEAFDLFVKEVVREMTVKSGQKCTAIRRIFVPEALYDAVAEALA 317 (521)
T ss_pred HHHHHhhhhhhccCceeEeeccccCceEEccCCcccchhHHHHHHHHHHHHHhccCCCccCCeEEEEehhHHHHHHHHHH
Confidence 99999865 478999999999999999999999 599999999999999999999999999999998 9999999
Q ss_pred HHHHhcccccCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCcEeeCCcccccC--CCCCCceeeceEEecCCC--CCcc
Q 001665 500 ELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVP--GYENGNFVGPTILRDVTS--NMEC 575 (1035)
Q Consensus 500 ~~~~~lkvG~p~d~~~~~Gpli~~~~~~rl~~~i~~av~~GAkvl~gG~~~~~p--~~~~g~fv~PTIl~~v~~--d~~i 575 (1035)
++++++++|+|.++++++|||+++.+++++.++|+.. .+|+++++||...... +..+|+|++||||.++.+ ++.+
T Consensus 318 ~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~~-~~ga~vl~gg~~~~~~~~~~~~g~~~~PTvl~~~~~~~~~~i 396 (521)
T PRK11903 318 ARLAKTTVGNPRNDGVRMGPLVSRAQLAAVRAGLAAL-RAQAEVLFDGGGFALVDADPAVAACVGPTLLGASDPDAATAV 396 (521)
T ss_pred HHHHhccCCCCCCCcCccCCCCCHHHHHHHHHHHHHH-hcCCEEEECCccCCCCCCCCCCCeEEcCEEEeccCCCccchH
Confidence 9999999999999999999999999999999999964 5799999999642211 123589999999987654 4789
Q ss_pred ccccccCcceeEEecCCHHHHHHHHHhcCCCcEEEEEcCCHHHHHHHHhcc--ceeEEEEcCCc-------------CCC
Q 001665 576 YKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEI--EARLVGINVPV-------------PSS 640 (1035)
Q Consensus 576 ~~eEiFGPVL~V~~~~d~eeAI~laN~~~~GLsasVfS~d~~~a~~~a~~l--~sG~V~IN~~~-------------~~P 640 (1035)
++||+||||++|++|+|++|||+++|+++|||++||||+|...+.++++++ ++|+|+||... .+|
T Consensus 397 ~~eE~FGPvl~V~~~~~~~eai~~~N~~~~gL~asvft~d~~~~~~~~~~l~~~~G~V~iN~~~~~~~~~~~~~~~~~~P 476 (521)
T PRK11903 397 HDVEVFGPVATLLPYRDAAHALALARRGQGSLVASVYSDDAAFLAAAALELADSHGRVHVISPDVAALHTGHGNVMPQSL 476 (521)
T ss_pred HhCcccCCeEEEEeeCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHHHHHhCCEEEEcCcccccccccCCCCCCCCC
Confidence 999999999999999999999999999999999999999999999999999 99999999641 279
Q ss_pred CCCCCCCCCCCcCc-HHHHHhcceeeEEE
Q 001665 641 FSSINESGEFNFCG-KSGVQFYTQIKTVA 668 (1035)
Q Consensus 641 fGG~g~SG~G~~~G-~~g~~~ft~~k~v~ 668 (1035)
|||+|.||+|+++| .+++++||++|+|.
T Consensus 477 fGG~k~SG~Gr~~g~~~~l~~~t~~~~~~ 505 (521)
T PRK11903 477 HGGPGRAGGGEELGGLRALAFYHRRSAVQ 505 (521)
T ss_pred CCCCCcCcCCcccccHHHHHHHhccceee
Confidence 99999999999954 89999999988765
|
|
| >cd07103 ALDH_F5_SSADH_GabD Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-81 Score=741.06 Aligned_cols=444 Identities=34% Similarity=0.520 Sum_probs=419.9
Q ss_pred eecCCCCCeEEEecCCCHHHHHHHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHH
Q 001665 221 VINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDV 300 (1035)
Q Consensus 221 v~nP~tGevi~~v~~~s~~dv~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e~La~~i~~etGk~~~eA~~EV 300 (1035)
++||+||+++++++.++.++++++++.|++|++.|+.++.++|.++|+++++.|+++.++|+++++.|+||+..+++.|+
T Consensus 1 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev 80 (451)
T cd07103 1 VINPATGEVIGEVPDAGAADADAAIDAAAAAFKTWRKTTARERAAILRRWADLIRERAEDLARLLTLEQGKPLAEARGEV 80 (451)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhcCccccCCCCCCcceeeeccceeEEEECCCCcchhchHHHHHHHHhcCCEEEEeCCCCChhHH
Q 001665 301 LFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTS 380 (1035)
Q Consensus 301 ~~a~~~l~~~~~~a~~~~g~~~~~~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~ALaaGNaVVlKPS~~ap~ta 380 (1035)
..+++.+++++..+....+...+....+...+.+++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++
T Consensus 81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~VIlKps~~~~~~~ 160 (451)
T cd07103 81 DYAASFLEWFAEEARRIYGRTIPSPAPGKRILVIKQPVGVVAAITPWNFPAAMITRKIAPALAAGCTVVLKPAEETPLSA 160 (451)
T ss_pred HHHHHHHHHHHHHHHHhcCcccccCCCCcceEEEEeeceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccCcHHH
Confidence 99999999988776665554333333456678899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCCcEEEeecc-hhhHhhhhcCCCccEEEEeccchHHHHHHHHHHhcCCceeecCCCcceEEEcCCCC
Q 001665 381 MILAALAMEAGLPDGVLNIVHGT-NDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMPDAS 459 (1035)
Q Consensus 381 ~~L~ell~eAGlP~gvv~vV~g~-~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~l~Pv~lElGGknp~IV~~dAD 459 (1035)
..|+++|.++|+|+|+|++|+|+ .+.+..|+.|+++|+|+||||+.+|+.|++.++++++|+++|+|||||+||++|||
T Consensus 161 ~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~vd~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~iV~~dad 240 (451)
T cd07103 161 LALAELAEEAGLPAGVLNVVTGSPAEIGEALCASPRVRKISFTGSTAVGKLLMAQAADTVKRVSLELGGNAPFIVFDDAD 240 (451)
T ss_pred HHHHHHHHHcCCCcccEEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCcEEEECCCCCeEEECCCCC
Confidence 99999999999999999999985 46778899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHhcccccCCCCCCCcCCCcCHHHHHHHHHHHHHHHH
Q 001665 460 IDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVD 538 (1035)
Q Consensus 460 ld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d~~~~~Gpli~~~~~~rl~~~i~~av~ 538 (1035)
++.|++.|++++|.|+||.|+++++|||+++++ +|+++|+++++++++|+|.++++++||++++.+++++.++++++++
T Consensus 241 l~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~ 320 (451)
T cd07103 241 LDKAVDGAIASKFRNAGQTCVCANRIYVHESIYDEFVEKLVERVKKLKVGNGLDEGTDMGPLINERAVEKVEALVEDAVA 320 (451)
T ss_pred HHHHHHHHHHHHHHhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcCcCHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999998 8999999999999999999999999999999999999999999999
Q ss_pred CCCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecCCHHHHHHHHHhcCCCcEEEEEcCCHHH
Q 001665 539 NGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLA 618 (1035)
Q Consensus 539 ~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI~laN~~~~GLsasVfS~d~~~ 618 (1035)
+|+++++||... ...|+|++|||+.++++++.+++||+||||++|++|+|++|||+++|+.+|||+++|||+|.+.
T Consensus 321 ~ga~~l~gg~~~----~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~ 396 (451)
T cd07103 321 KGAKVLTGGKRL----GLGGYFYEPTVLTDVTDDMLIMNEETFGPVAPIIPFDTEDEVIARANDTPYGLAAYVFTRDLAR 396 (451)
T ss_pred CCCEEEeCCCcC----CCCCcEECCEEeeCCCCcCHHHhCCCCCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCHHH
Confidence 999999998642 1368999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhccceeEEEEcCCcC----CCCCCCCCCCCCCcCcHHHHHhcceeeEEE
Q 001665 619 ARKFQNEIEARLVGINVPVP----SSFSSINESGEFNFCGKSGVQFYTQIKTVA 668 (1035)
Q Consensus 619 a~~~a~~l~sG~V~IN~~~~----~PfGG~g~SG~G~~~G~~g~~~ft~~k~v~ 668 (1035)
+++++.++++|.|+||+... +||||+|.||+|+++|.+++++||+.|++.
T Consensus 397 ~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~SG~G~~~g~~~~~~~~~~k~v~ 450 (451)
T cd07103 397 AWRVAEALEAGMVGINTGLISDAEAPFGGVKESGLGREGGKEGLEEYLETKYVS 450 (451)
T ss_pred HHHHHHhCCcceEEECCCCCCCCCCCcCCCccCcCCccchHHHHHHHhceeEEe
Confidence 99999999999999998742 799999999999999999999999999874
|
Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. |
| >cd07098 ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and 22A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-81 Score=742.09 Aligned_cols=449 Identities=26% Similarity=0.399 Sum_probs=414.3
Q ss_pred ecCCCCCeEEEecCCCHHHHHHHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHH
Q 001665 222 INPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQ-RDV 300 (1035)
Q Consensus 222 ~nP~tGevi~~v~~~s~~dv~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e~La~~i~~etGk~~~eA~-~EV 300 (1035)
+||+||+++++++.++.+|+++++++|++||+.|+.++.++|.++|++++++|+++.++|+++++.|+||++.+++ .|+
T Consensus 1 ~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~e~ 80 (465)
T cd07098 1 YDPATGQHLGSVPADTPEDVDEAIAAARAAQREWAKTSFAERRKVLRSLLKYILENQEEICRVACRDTGKTMVDASLGEI 80 (465)
T ss_pred CCCCCCCeeEEeeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 4899999999999999999999999999999999999999999999999999999999999999999999999985 589
Q ss_pred HHHHHHHHHHHHHHHhhcCc-cccCC--CCCCcceeeeccceeEEEECCCCcchhchHHHHHHHHhcCCEEEEeCCCCCh
Q 001665 301 LFGLEVVEQACAVATLQIGE-FVPNA--LCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNP 377 (1035)
Q Consensus 301 ~~a~~~l~~~~~~a~~~~g~-~~~~~--~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~ALaaGNaVVlKPS~~ap 377 (1035)
..+++.+++++......... ..+.. ..+...+++++|+|||++|+|||||+..+++++++||++||+||+|||+.+|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p 160 (465)
T cd07098 81 LVTCEKIRWTLKHGEKALRPESRPGGLLMFYKRARVEYEPLGVVGAIVSWNYPFHNLLGPIIAALFAGNAIVVKVSEQVA 160 (465)
T ss_pred HHHHHHHHHHHHHHHHHhCCcccCCccccCCceeEEEEecceeEEEEcccCcHHHHHHHHHHHHHHcCCEEEEECCCcCc
Confidence 99999999988765442221 11111 1123457789999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHH----HHHhCCCCCcEEEeecchhhHhhhhcCCCccEEEEeccchHHHHHHHHHHhcCCceeecCCCcceEE
Q 001665 378 GTSMILAAL----AMEAGLPDGVLNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAI 453 (1035)
Q Consensus 378 ~ta~~L~el----l~eAGlP~gvv~vV~g~~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~l~Pv~lElGGknp~I 453 (1035)
+++..++++ |.++|+|+|+||+|+|+.+.+.+|+.|++|+.|.||||+.+|+.|++.|+++++|+++|+|||||+|
T Consensus 161 ~~~~~~~~~~~~~l~~aGlP~gvv~~v~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~v~~~a~~~~~~~~lelgG~~~~i 240 (465)
T cd07098 161 WSSGFFLSIIRECLAACGHDPDLVQLVTCLPETAEALTSHPVIDHITFIGSPPVGKKVMAAAAESLTPVVLELGGKDPAI 240 (465)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCeEEEEECCHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEECCCCCeEE
Confidence 999876665 4689999999999999778899999999999999999999999999999999999999999999999
Q ss_pred EcCCCCHHHHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHhcccccCCCCCCCcCCCcCHHHHHHHHHH
Q 001665 454 IMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRL 532 (1035)
Q Consensus 454 V~~dADld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d~~~~~Gpli~~~~~~rl~~~ 532 (1035)
|++|||++.|++.|++++|+++||.|+++++|||+++++ +|+++|+++++.+++|+|.++++++|||+++.+++++.++
T Consensus 241 V~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~~~~~ 320 (465)
T cd07098 241 VLDDADLDQIASIIMRGTFQSSGQNCIGIERVIVHEKIYDKLLEILTDRVQALRQGPPLDGDVDVGAMISPARFDRLEEL 320 (465)
T ss_pred ECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHHHHHH
Confidence 999999999999999999999999999999999999988 9999999999999999999999999999999999999999
Q ss_pred HHHHHHCCCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecCCHHHHHHHHHhcCCCcEEEEE
Q 001665 533 IQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIF 612 (1035)
Q Consensus 533 i~~av~~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI~laN~~~~GLsasVf 612 (1035)
+++++++|+++++||.....+....|.|++|||+.++++++.+++||+||||++|++|+|++|||+++|+++|||+++||
T Consensus 321 i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gLsa~i~ 400 (465)
T cd07098 321 VADAVEKGARLLAGGKRYPHPEYPQGHYFPPTLLVDVTPDMKIAQEEVFGPVMVVMKASDDEEAVEIANSTEYGLGASVF 400 (465)
T ss_pred HHHHHHCCCEEEeCCccCCcCcCCCCcEEcCEEEeCCCCCCHHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEE
Confidence 99999999999999865332222468999999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHhccceeEEEEcCCc------CCCCCCCCCCCCCCcCcHHHHHhcceeeEEEEe
Q 001665 613 TSSGLAARKFQNEIEARLVGINVPV------PSSFSSINESGEFNFCGKSGVQFYTQIKTVAQQ 670 (1035)
Q Consensus 613 S~d~~~a~~~a~~l~sG~V~IN~~~------~~PfGG~g~SG~G~~~G~~g~~~ft~~k~v~~~ 670 (1035)
|+|.+.+.+++.++++|.|+||... .+||||+|.||+|+++|.+++++|++.|++.++
T Consensus 401 t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~~~~~ 464 (465)
T cd07098 401 GKDIKRARRIASQLETGMVAINDFGVNYYVQQLPFGGVKGSGFGRFAGEEGLRGLCNPKSVTED 464 (465)
T ss_pred cCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCcCccccccCCccChHHHHHHhheeEEEEEe
Confidence 9999999999999999999999742 179999999999999999999999999998764
|
Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. |
| >PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-82 Score=771.65 Aligned_cols=465 Identities=21% Similarity=0.276 Sum_probs=417.1
Q ss_pred CCccceEEcCEEecCCCCCeEEeecCCCCCeEEEecCCCHHHHHHHHHHHHHh-hHhhhCCCHHHHHHHHHHHHHHHHHh
Q 001665 199 NNRVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRA-FPAWKNTPVATRQRIMFKLQELIRRD 277 (1035)
Q Consensus 199 ~~~~~~~I~G~~~~~~~~~~~~v~nP~tGevi~~v~~~s~~dv~~av~~Ar~A-~~~W~~~s~~~R~~iL~~la~~L~~~ 277 (1035)
++.+++||||+|+.+ ++..++++||+||+++++++.++ +|+++||++|++| |+.|+.++..+|.++|++++++|+++
T Consensus 2 ~~~~~~~i~G~~~~~-~~~~~~~~nP~tg~~i~~~~~~~-~dv~~Av~~A~~A~~~~W~~~~~~eR~~~L~~~a~~l~~~ 79 (675)
T PRK11563 2 MQKLQSYVAGRWQTG-QGEGRPLHDAVTGEPVARVSSEG-LDFAAALAYAREVGGPALRALTFHERAAMLKALAKYLLER 79 (675)
T ss_pred CccccceecCEEEcC-CCCceeccCCCCCCEEEEEcCCc-HHHHHHHHHHHHhhhhhhhcCCHHHHHHHHHHHHHHHHHh
Confidence 356679999999976 45789999999999999999987 6999999999998 79999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhhc--------CccccCCCCC-Ccceeeeccc-eeEEEECCC
Q 001665 278 IDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQI--------GEFVPNALCG-LDTYCFREPL-GVCAGICPF 347 (1035)
Q Consensus 278 ~e~La~~i~~etGk~~~eA~~EV~~a~~~l~~~~~~a~~~~--------g~~~~~~~~g-~~~~~~~ePl-GVV~iI~P~ 347 (1035)
.++|++ ++.|+||++.+++.|+..+++.+++++..+.... ++..+....+ ...+..++|+ |||++|+||
T Consensus 80 ~~ela~-l~~e~GK~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~GVv~~I~Pw 158 (675)
T PRK11563 80 KEELYA-LSAQTGATRRDSWIDIEGGIGTLFTYASKGRRELPNDTVLVEGEVEPLSKGGTFAGRHILTPLEGVAVHINAF 158 (675)
T ss_pred HHHHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhhccccccccCCccccccCCCcccceEEEeecCceEEEECCC
Confidence 999998 5899999999999999999999999988765432 2222211112 1246788997 999999999
Q ss_pred CcchhchHHHHHHHHhcCCEEEEeCCCCChhHHHHHHHHHHHhC-CCCCcEEEeecchhhHhhhhcCCCccEEEEeccch
Q 001665 348 NFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAG-LPDGVLNIVHGTNDVINHICDDEDIKAISFVASST 426 (1035)
Q Consensus 348 N~Pl~~~~~~l~~ALaaGNaVVlKPS~~ap~ta~~L~ell~eAG-lP~gvv~vV~g~~e~~~~L~~h~~vd~V~fTGS~~ 426 (1035)
|||+.++++++++||++||+||+|||+.+|+++.+|++++.++| +|+|+||+|+|+.. ..+..++++++|.||||++
T Consensus 159 NfP~~~~~~~i~pALaaGN~VV~KPse~tp~~a~~l~~~~~eaG~~P~gv~~vv~g~~~--~~~~~~~~i~~v~FTGS~~ 236 (675)
T PRK11563 159 NFPVWGMLEKLAPAFLAGVPAIVKPATATAYLTEAVVRLIVESGLLPEGALQLICGSAG--DLLDHLDGQDVVTFTGSAA 236 (675)
T ss_pred chHHHHHHHHHHHHHHcCCeEEEECCCCCcHHHHHHHHHHHHcCCCCCCcEEEeeCCHH--HHhhcCCCCCEEEEECcHH
Confidence 99999999999999999999999999999999999999999999 99999999998532 2222235799999999999
Q ss_pred HHHHHHHH--HHhcCCceeecCCCcceEEEcCCCC-----HHHHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHH
Q 001665 427 ASVQMYAR--AAARGKRVQSNRGGKNYAIIMPDAS-----IDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDEL 498 (1035)
Q Consensus 427 vG~~I~~a--Aa~~l~Pv~lElGGknp~IV~~dAD-----ld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~L 498 (1035)
+|+.|++. ++++++|+++|||||||+||++||| ++.|++.+++|+|.|+||.|++++++||+++++ +|+++|
T Consensus 237 ~G~~i~~~~~a~~~~~~~~lELGGknp~IV~~DAd~~~~dld~aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l 316 (675)
T PRK11563 237 TAQKLRAHPNVVANSVPFTAEADSLNAAILGPDATPGTPEFDLFVKEVVREMTVKAGQKCTAIRRAIVPRALVDAVIEAL 316 (675)
T ss_pred HHHHHHhhhhhhhCCceEEEecCCcCceEECCCCCcCchhHHHHHHHHHHHHHHhCCCccccceeEEeeHHHHHHHHHHH
Confidence 99999985 4588999999999999999999995 999999999999999999999999999999998 999999
Q ss_pred HHHHHhcccccCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCcEeeCCccc-c--cCCCCCCceeeceEEecCCC--CC
Q 001665 499 VELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNI-V--VPGYENGNFVGPTILRDVTS--NM 573 (1035)
Q Consensus 499 v~~~~~lkvG~p~d~~~~~Gpli~~~~~~rl~~~i~~av~~GAkvl~gG~~~-~--~p~~~~g~fv~PTIl~~v~~--d~ 573 (1035)
+++++++++|+|.++++++|||+++.+++++.++|++|+++ |++++||... . .+....|+|++||||.++++ ++
T Consensus 317 ~~~~~~l~vG~p~d~~t~~GPli~~~~~~~i~~~i~~a~~~-a~vl~Gg~~~~~~~~~~~~~g~f~~PTvl~~v~~~~~~ 395 (675)
T PRK11563 317 RARLAKVVVGDPRLEGVRMGALASLEQREDVREKVAALLAA-AEIVFGGPDSFEVVGADAEKGAFFPPTLLYCDDPLEAP 395 (675)
T ss_pred HHHHhcCccCCCCCCCCcccCCcCHHHHHHHHHHHHHHHhC-CEEEECCcccccccCCCCCCCeeECCEEEeccCchhhh
Confidence 99999999999999999999999999999999999999999 9999998531 1 11124689999999999998 57
Q ss_pred ccccccccCcceeEEecCCHHHHHHHHHhcCCCcEEEEEcCCHHHHHHHHhccc--eeEEEEcCC-------------cC
Q 001665 574 ECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIE--ARLVGINVP-------------VP 638 (1035)
Q Consensus 574 ~i~~eEiFGPVL~V~~~~d~eeAI~laN~~~~GLsasVfS~d~~~a~~~a~~l~--sG~V~IN~~-------------~~ 638 (1035)
.+++||+||||++|++|+|+||||+++|+++|||++||||+|.+.+.+++++++ +|.|+||.. ..
T Consensus 396 ~i~~eEiFGPVl~V~~~~~~~eai~~aN~s~~gL~asvft~d~~~a~~~~~~l~~~~G~v~iN~~~~~~~~~~~~~~~~~ 475 (675)
T PRK11563 396 AVHDVEAFGPVSTLMPYDDLDEAIELAARGKGSLVASLVTADPEVARELVLGAAPWHGRLLVLNRESAKESTGHGSPLPQ 475 (675)
T ss_pred hHhhccccCCceEEEecCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHHHHhcCCEEEEcCccccccccCCCCCCcC
Confidence 999999999999999999999999999999999999999999999999999997 999999963 12
Q ss_pred CCCCCCCCCCCCCc-CcHHHHHhcceeeEEEE
Q 001665 639 SSFSSINESGEFNF-CGKSGVQFYTQIKTVAQ 669 (1035)
Q Consensus 639 ~PfGG~g~SG~G~~-~G~~g~~~ft~~k~v~~ 669 (1035)
+||||+|.||+|++ +|.+++++|++.|++..
T Consensus 476 ~pfGG~k~SG~G~~~~g~~~~~~f~~~k~~~~ 507 (675)
T PRK11563 476 LVHGGPGRAGGGEELGGLRGVKHYMQRTAVQG 507 (675)
T ss_pred CCcCCCCCCCCCccccchhHHHHhheeeeeec
Confidence 79999999999999 56999999999999865
|
|
| >KOG2456 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-83 Score=696.92 Aligned_cols=442 Identities=22% Similarity=0.307 Sum_probs=402.7
Q ss_pred HHHHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHH-HHHhhc
Q 001665 241 FKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQ-RDVLFGLEVVEQACA-VATLQI 318 (1035)
Q Consensus 241 v~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e~La~~i~~etGk~~~eA~-~EV~~a~~~l~~~~~-~a~~~~ 318 (1035)
+++.++++|.+|.+.++.+.+.|.++|++|.++++++.++|.+++..|.+|+..++. .|+...+..++++.. +..|.+
T Consensus 4 ~~~~v~~~R~~F~sGrtr~~efR~~QL~~L~r~i~e~e~~i~~Al~~DL~k~~~es~~~Ev~~~~~~i~~~l~~L~~wv~ 83 (477)
T KOG2456|consen 4 ISETVRRLRLAFSSGRTRPLEFRKQQLEALYRMIQENEKEIIEALAADLHKPELESYLNEVGYVLNEIRYALENLPEWVK 83 (477)
T ss_pred HHHHHHHHHHHHhcCCcCChHHHHHHHHHHHHHHHhhHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhhHHhcc
Confidence 556699999999999999999999999999999999999999999999999999884 688888888888766 345555
Q ss_pred CccccCCC--CCCcceeeeccceeEEEECCCCcchhchHHHHHHHHhcCCEEEEeCCCCChhHHHHHHHHHHHhCCCCCc
Q 001665 319 GEFVPNAL--CGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGV 396 (1035)
Q Consensus 319 g~~~~~~~--~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~ALaaGNaVVlKPS~~ap~ta~~L~ell~eAGlP~gv 396 (1035)
.+++.... .-.+.+++.+|+|||++|+|||||+.+.+.++++||||||+||+||||.+|.++.+|++++.++ |+.++
T Consensus 84 ~~~v~~~~~t~~dk~~I~~~p~GvVLiI~~wNyP~~L~l~PligAiAAGN~VVlKPSEls~n~a~~lakllp~Y-ld~~~ 162 (477)
T KOG2456|consen 84 PEPVKKSFLTFLDKAYIEKEPLGVVLIIGPWNYPLNLTLVPLIGAIAAGNAVVLKPSELSPNTAKLLAKLLPQY-LDQDL 162 (477)
T ss_pred ccccCcccccccCceeEEecCCceEEEEccCCCcceeehhhhhhhhhcCCEEEechhhcChhHHHHHHHHHHHh-cCcce
Confidence 55554321 2346788999999999999999999999999999999999999999999999999999999999 99999
Q ss_pred EEEeecchhhHhhhhcCCCccEEEEeccchHHHHHHHHHHhcCCceeecCCCcceEEEcCCCCHHHHHHHHHHHHhccCC
Q 001665 397 LNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAG 476 (1035)
Q Consensus 397 v~vV~g~~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~l~Pv~lElGGknp~IV~~dADld~Aa~~Iv~s~f~naG 476 (1035)
+.||.|+.+++.+|++| ++|+|+||||+.+|+.|+.+||++++||+||||||+|++|++|||++-|+++|+||++.|+|
T Consensus 163 ~~VV~Ggv~ETt~LL~~-rfD~IfyTGsp~VgkIim~aAaKhLTPvtLELGGKsP~~vd~~~d~~ia~~RI~~gk~~N~G 241 (477)
T KOG2456|consen 163 IRVVNGGVPETTELLKQ-RFDHIFYTGSPRVGKIIMAAAAKHLTPVTLELGGKSPCYVDKNCDLKIAARRIAWGKWMNSG 241 (477)
T ss_pred EEEecCCCchHHHHHHh-hccEEEecCCchHHHHHHHHHHhcCCcEEEEcCCCCCeeecCCcCHHHHHHHHHHHhhccCC
Confidence 99999999999999997 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccCCceEEEeCccH-HHHHHHHHHHHhcccccCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCcEeeCCcccccCCC
Q 001665 477 ERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGY 555 (1035)
Q Consensus 477 Q~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d~~~~~Gpli~~~~~~rl~~~i~~av~~GAkvl~gG~~~~~p~~ 555 (1035)
|.|.|+++|+++.+++ +++++++..++++ .|...+++.|++++||..|++|+..+++.. .+|+.||+. +
T Consensus 242 QtCvapDYiL~~k~~~~kli~alk~~l~eF-YG~n~~eS~d~sRiIn~~hf~Rl~~ll~~~----~kv~~Gg~~-----d 311 (477)
T KOG2456|consen 242 QTCVAPDYILCSKSIQPKLIDALKSTLKEF-YGENPKESKDLSRIINQRHFQRLSALLDET----GKVAIGGES-----D 311 (477)
T ss_pred CeeccCCeEEecHhhhHHHHHHHHHHHHHH-hCCCccccccHHHHhhHHHHHHHHHHhcCC----CceecCCcc-----c
Confidence 9999999999999988 8899999888888 566677889999999999999999999854 589999984 4
Q ss_pred CCCceeeceEEecCCCCCccccccccCcceeEEecCCHHHHHHHHHhcCCCcEEEEEcCCHHHHHHHHhccceeEEEEcC
Q 001665 556 ENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINV 635 (1035)
Q Consensus 556 ~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI~laN~~~~GLsasVfS~d~~~a~~~a~~l~sG~V~IN~ 635 (1035)
+...|++||||.+|++++++|+||+|||||+|+.|++++|+|+.+|+.+.+|++|+||+|...++++..++.+|.|.+|+
T Consensus 312 ~~d~~I~PTIL~DV~~~~p~M~eEIFGPiLPIi~v~~l~Eai~~In~~eKPLa~Y~Fs~n~~~vkr~l~~tsSGgvt~ND 391 (477)
T KOG2456|consen 312 ESDRYIAPTILLDVPEDSPVMQEEIFGPILPIITVQSLDEAINFINEREKPLALYIFSNNEKLVKRFLTETSSGGVTVND 391 (477)
T ss_pred hhhcccCCeEEecCCCCChhhhhhhccCccceeEhhhHHHHHHHHhcCCCceEEEEecCCHHHHHHHHHhccCCCeeecc
Confidence 56789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Cc------CCCCCCCCCCCCCCcCcHHHHHhcceeeEEEEecCCCCcCCCCcccCCCCCCcccccccccccCCCCCCCCC
Q 001665 636 PV------PSSFSSINESGEFNFCGKSGVQFYTQIKTVAQQWNDLPKLGMPLTMPLSSETDMRSQGVSSVFPQSSERESP 709 (1035)
Q Consensus 636 ~~------~~PfGG~g~SG~G~~~G~~g~~~ft~~k~v~~~~~~~~~~~~~~~~p~~~~~~~~e~~~~~~~~p~~~~~~~ 709 (1035)
.. .+||||+|.||+|+|||++||+.|+|.|++..+.. ..+.+...|||||+.+|+.
T Consensus 392 ~i~H~~~~~lPFGGVG~SGmG~YhGK~sFdTFSH~k~~l~rs~------------------~~d~~~~~RYPP~S~~K~~ 453 (477)
T KOG2456|consen 392 VIMHVTLDSLPFGGVGESGMGRYHGKFSFDTFSHEKSCLLRSL------------------GGDKLLALRYPPYSPQKLT 453 (477)
T ss_pred eEEEEEeeccCcCCcCccccccccccccccccccchhhhhccc------------------ccchhhhhcCCCCChHHHH
Confidence 73 29999999999999999999999999999876521 2267777888888887765
Q ss_pred CCC
Q 001665 710 SPR 712 (1035)
Q Consensus 710 ~~~ 712 (1035)
..|
T Consensus 454 ~lr 456 (477)
T KOG2456|consen 454 LLR 456 (477)
T ss_pred HHH
Confidence 443
|
|
| >cd07093 ALDH_F8_HMSADH Human aldehyde dehydrogenase family 8 member A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-81 Score=739.52 Aligned_cols=447 Identities=34% Similarity=0.489 Sum_probs=418.3
Q ss_pred eecCCCCCeEEEecCCCHHHHHHHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHH-H
Q 001665 221 VINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQR-D 299 (1035)
Q Consensus 221 v~nP~tGevi~~v~~~s~~dv~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e~La~~i~~etGk~~~eA~~-E 299 (1035)
++||+||+++++++.++.+++++++++|++||+.|+.++.++|.++|++++++|++++++|++++++|+||+..+++. |
T Consensus 1 ~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~~e 80 (455)
T cd07093 1 NFNPATGEVLAKVPEGGAAEVDAAVAAAKEAFPGWSRMSPAERARILHKVADLIEARADELALLESLDTGKPITLARTRD 80 (455)
T ss_pred CcCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Confidence 369999999999999999999999999999999999999999999999999999999999999999999999988854 9
Q ss_pred HHHHHHHHHHHHHHHHhhcCccccCCCCCCcceeeeccceeEEEECCCCcchhchHHHHHHHHhcCCEEEEeCCCCChhH
Q 001665 300 VLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGT 379 (1035)
Q Consensus 300 V~~a~~~l~~~~~~a~~~~g~~~~~~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~ALaaGNaVVlKPS~~ap~t 379 (1035)
+..+++.+++++.......+..... ..+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.+
T Consensus 81 v~~~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~AL~aGN~VIlkps~~~p~~ 159 (455)
T cd07093 81 IPRAAANFRFFADYILQLDGESYPQ-DGGALNYVLRQPVGVAGLITPWNLPLMLLTWKIAPALAFGNTVVLKPSEWTPLT 159 (455)
T ss_pred HHHHHHHHHHHHHhHHHhCCccccC-CCCceEEEEEEeeeEEEEECCCChHHHHHHHHHHHHHhcCCEEEeECCCcCcHH
Confidence 9999999999887665544332222 235566788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCCCcEEEeecc-hhhHhhhhcCCCccEEEEeccchHHHHHHHHHHhcCCceeecCCCcceEEEcCCC
Q 001665 380 SMILAALAMEAGLPDGVLNIVHGT-NDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMPDA 458 (1035)
Q Consensus 380 a~~L~ell~eAGlP~gvv~vV~g~-~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~l~Pv~lElGGknp~IV~~dA 458 (1035)
+..|+++|.++|+|+|+|++|+|. .+.+..|+.|+++++|+||||..+|+.|++.|+++++|+++|+|||||+||++||
T Consensus 160 ~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~iV~~dA 239 (455)
T cd07093 160 AWLLAELANEAGLPPGVVNVVHGFGPEAGAALVAHPDVDLISFTGETATGRTIMRAAAPNLKPVSLELGGKNPNIVFADA 239 (455)
T ss_pred HHHHHHHHHhcCCCccceEEEecCchHHHHHHhcCCCccEEEEECCHHHHHHHHHHHhhcccceEeecCCCCceEECCCC
Confidence 999999999999999999999984 5788999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHhcccccCCCCCCCcCCCcCHHHHHHHHHHHHHHH
Q 001665 459 SIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAV 537 (1035)
Q Consensus 459 Dld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d~~~~~Gpli~~~~~~rl~~~i~~av 537 (1035)
|++.|++.|++++|+++||.|+++++|||+++++ +|+++|+++++.+++|+|.++++++||++++.+++++.++|++++
T Consensus 240 dl~~a~~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~ 319 (455)
T cd07093 240 DLDRAVDAAVRSSFSNNGEVCLAGSRILVQRSIYDEFLERFVERAKALKVGDPLDPDTEVGPLISKEHLEKVLGYVELAR 319 (455)
T ss_pred CHHHHHHHHHHHHHhccCCCcCCCceEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999998 899999999999999999999999999999999999999999999
Q ss_pred HCCCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecCCHHHHHHHHHhcCCCcEEEEEcCCHH
Q 001665 538 DNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGL 617 (1035)
Q Consensus 538 ~~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI~laN~~~~GLsasVfS~d~~ 617 (1035)
.+|+++++||.....+....|.|++|||+.++++++.+++||+||||++|++|+|++|||+++|+.++||+++|||+|.+
T Consensus 320 ~~ga~v~~gg~~~~~~~~~~~~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gls~~i~t~d~~ 399 (455)
T cd07093 320 AEGATILTGGGRPELPDLEGGYFVEPTVITGLDNDSRVAQEEIFGPVVTVIPFDDEEEAIELANDTPYGLAAYVWTRDLG 399 (455)
T ss_pred HCCCEEEeCCCccccccCCCCceECCEEEecCCCCChHHhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHH
Confidence 99999999997533222246899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhccceeEEEEcCCcC----CCCCCCCCCCCCCcCcHHHHHhcceeeEEE
Q 001665 618 AARKFQNEIEARLVGINVPVP----SSFSSINESGEFNFCGKSGVQFYTQIKTVA 668 (1035)
Q Consensus 618 ~a~~~a~~l~sG~V~IN~~~~----~PfGG~g~SG~G~~~G~~g~~~ft~~k~v~ 668 (1035)
.+++++.++++|.|+||+... +||||+|.||+|++||.+|+++|++.|++.
T Consensus 400 ~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~G~~~g~~~~~~~~~~k~~~ 454 (455)
T cd07093 400 RAHRVARRLEAGTVWVNCWLVRDLRTPFGGVKASGIGREGGDYSLEFYTELKNVC 454 (455)
T ss_pred HHHHHHHhCCcceEEECCCCCCCCCCCcCCCccCcCCCCchHHHHHHHhceeEEe
Confidence 999999999999999998743 899999999999999999999999999874
|
In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. |
| >PTZ00381 aldehyde dehydrogenase family protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-81 Score=744.82 Aligned_cols=425 Identities=22% Similarity=0.305 Sum_probs=392.1
Q ss_pred CCCHHHHHHHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHH
Q 001665 235 LTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQ-RDVLFGLEVVEQACAV 313 (1035)
Q Consensus 235 ~~s~~dv~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e~La~~i~~etGk~~~eA~-~EV~~a~~~l~~~~~~ 313 (1035)
..+.+++++++++|++||+.|+.++.++|.++|++++++|+++.++|++++++|+||+..++. .|+..+++.++++++.
T Consensus 3 ~~~~~~i~~av~~a~~a~~~~~~~~~~~R~~~L~~l~~~l~~~~~~i~~a~~~d~Gk~~~ea~~~Ev~~~~~~i~~~~~~ 82 (493)
T PTZ00381 3 PDNPEIIPPIVKKLKESFLTGKTRPLEFRKQQLRNLLRMLEENKQEFSEAVHKDLGRHPFETKMTEVLLTVAEIEHLLKH 82 (493)
T ss_pred CCCHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 468899999999999999999999999999999999999999999999999999999999986 4999999999988775
Q ss_pred HHhh-cCccccC--CCCCCcceeeeccceeEEEECCCCcchhchHHHHHHHHhcCCEEEEeCCCCChhHHHHHHHHHHHh
Q 001665 314 ATLQ-IGEFVPN--ALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEA 390 (1035)
Q Consensus 314 a~~~-~g~~~~~--~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~ALaaGNaVVlKPS~~ap~ta~~L~ell~eA 390 (1035)
.... ....... .......+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++.+|++++.++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~iI~PwN~Pl~l~~~~l~~ALaaGN~VIlKPse~tp~t~~~l~~ll~~~ 162 (493)
T PTZ00381 83 LDEYLKPEKVDTVGVFGPGKSYIIPEPLGVVLVIGAWNYPLNLTLIPLAGAIAAGNTVVLKPSELSPHTSKLMAKLLTKY 162 (493)
T ss_pred HHHHhCCcccCCccccCCCceEEEEecCcEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHh
Confidence 5433 3222211 112235688999999999999999999999999999999999999999999999999999999986
Q ss_pred CCCCCcEEEeecchhhHhhhhcCCCccEEEEeccchHHHHHHHHHHhcCCceeecCCCcceEEEcCCCCHHHHHHHHHHH
Q 001665 391 GLPDGVLNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSA 470 (1035)
Q Consensus 391 GlP~gvv~vV~g~~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~l~Pv~lElGGknp~IV~~dADld~Aa~~Iv~s 470 (1035)
+|+|++++|+|+.+.+.+|+.|+ +|+|+||||+.+|+.|+++|+++++|+++|||||||+||++|||++.||+.|+++
T Consensus 163 -lp~~~v~vv~g~~~~~~~l~~~~-~d~i~FTGS~~vG~~V~~~aa~~l~pv~lElGGk~p~iV~~dAdl~~Aa~~i~~g 240 (493)
T PTZ00381 163 -LDPSYVRVIEGGVEVTTELLKEP-FDHIFFTGSPRVGKLVMQAAAENLTPCTLELGGKSPVIVDKSCNLKVAARRIAWG 240 (493)
T ss_pred -CCcCEEEEecCCHHHHHHHHhCC-CCEEEEECCHHHHHHHHHHHHhcCCcEEEEcCCCCceEEcCCCCHHHHHHHHHHH
Confidence 99999999999888889999986 9999999999999999999999999999999999999999999999999999999
Q ss_pred HhccCCCCccCCceEEEeCccH-HHHHHHHHHHHhcccccCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCcEeeCCcc
Q 001665 471 GFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRN 549 (1035)
Q Consensus 471 ~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d~~~~~Gpli~~~~~~rl~~~i~~av~~GAkvl~gG~~ 549 (1035)
+|.|+||.|+|+++|+|+++++ +|+++|++.++.+. |++.+.++++||+++.++++++.++++ ++|+++++||..
T Consensus 241 ~~~naGQ~C~A~~~vlV~~~i~d~f~~~l~~~~~~~~-g~~~~~~~~~gpli~~~~~~ri~~~i~---~~ga~~~~gG~~ 316 (493)
T PTZ00381 241 KFLNAGQTCVAPDYVLVHRSIKDKFIEALKEAIKEFF-GEDPKKSEDYSRIVNEFHTKRLAELIK---DHGGKVVYGGEV 316 (493)
T ss_pred HHhhcCCcCCCCCEEEEeHHHHHHHHHHHHHHHHHHh-CCCCccCCCcCCCCCHHHHHHHHHHHH---hCCCcEEECCCc
Confidence 9999999999999999999998 89999999999885 666678899999999999999999996 368999999863
Q ss_pred cccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecCCHHHHHHHHHhcCCCcEEEEEcCCHHHHHHHHhcccee
Q 001665 550 IVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEAR 629 (1035)
Q Consensus 550 ~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI~laN~~~~GLsasVfS~d~~~a~~~a~~l~sG 629 (1035)
+..+.|++|||+.+++++|.+++||+||||++|++|+|++|||+++|+.++||++||||+|.+.+++++.++++|
T Consensus 317 -----~~~~~~i~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~~n~~~~gLa~~vft~d~~~~~~~~~~~~sG 391 (493)
T PTZ00381 317 -----DIENKYVAPTIIVNPDLDSPLMQEEIFGPILPILTYENIDEVLEFINSRPKPLALYYFGEDKRHKELVLENTSSG 391 (493)
T ss_pred -----CCCCCeEeeEEEecCCCCChHHhccccCCeEEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCcc
Confidence 236889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCc-----C-CCCCCCCCCCCCCcCcHHHHHhcceeeEEEEe
Q 001665 630 LVGINVPV-----P-SSFSSINESGEFNFCGKSGVQFYTQIKTVAQQ 670 (1035)
Q Consensus 630 ~V~IN~~~-----~-~PfGG~g~SG~G~~~G~~g~~~ft~~k~v~~~ 670 (1035)
.|+||+.. . +||||+|.||+|++||.+||++||+.|+|+.+
T Consensus 392 ~v~IN~~~~~~~~~~~PFGG~g~SG~G~~~G~~g~~~fs~~k~v~~~ 438 (493)
T PTZ00381 392 AVVINDCVFHLLNPNLPFGGVGNSGMGAYHGKYGFDTFSHPKPVLNK 438 (493)
T ss_pred eEEECCccccccCCCCCCCCcCcccccccchHHHHHhccceeEEEEc
Confidence 99999763 2 89999999999999999999999999999875
|
|
| >cd07100 ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-81 Score=732.75 Aligned_cols=422 Identities=31% Similarity=0.463 Sum_probs=398.5
Q ss_pred HHHHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhhcC-
Q 001665 241 FKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIG- 319 (1035)
Q Consensus 241 v~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e~La~~i~~etGk~~~eA~~EV~~a~~~l~~~~~~a~~~~g- 319 (1035)
|+.++++|++||+.|+.++.++|.++|++++++|+++.++|++++++|+||+..+++.|+..+++.+++++..+....+
T Consensus 1 v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~ 80 (429)
T cd07100 1 IEAALDRAHAAFLAWRKTSFAERAALLRKLADLLRERKDELARLITLEMGKPIAEARAEVEKCAWICRYYAENAEAFLAD 80 (429)
T ss_pred CHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 4789999999999999999999999999999999999999999999999999999999999999999999887665432
Q ss_pred ccccCCCCCCcceeeeccceeEEEECCCCcchhchHHHHHHHHhcCCEEEEeCCCCChhHHHHHHHHHHHhCCCCCcEEE
Q 001665 320 EFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNI 399 (1035)
Q Consensus 320 ~~~~~~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~ALaaGNaVVlKPS~~ap~ta~~L~ell~eAGlP~gvv~v 399 (1035)
...+. .+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++..|+++|.++|+|+|+||+
T Consensus 81 ~~~~~--~~~~~~~~~~P~GvV~~I~P~N~Pl~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~l~~aglP~gvv~~ 158 (429)
T cd07100 81 EPIET--DAGKAYVRYEPLGVVLGIMPWNFPFWQVFRFAAPNLMAGNTVLLKHASNVPGCALAIEELFREAGFPEGVFQN 158 (429)
T ss_pred eeccC--CCceEEEEEEeeeEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCCCcCcEEE
Confidence 22222 2445678899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eecchhhHhhhhcCCCccEEEEeccchHHHHHHHHHHhcCCceeecCCCcceEEEcCCCCHHHHHHHHHHHHhccCCCCc
Q 001665 400 VHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERC 479 (1035)
Q Consensus 400 V~g~~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~l~Pv~lElGGknp~IV~~dADld~Aa~~Iv~s~f~naGQ~C 479 (1035)
|+|+.+.+..|+.|++|++|.||||+.+|+.|++.+++++||+++|+|||||+||++|||++.|++.|++++|+|+||.|
T Consensus 159 v~g~~~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa~~~~~~~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C 238 (429)
T cd07100 159 LLIDSDQVEAIIADPRVRGVTLTGSERAGRAVAAEAGKNLKKSVLELGGSDPFIVLDDADLDKAVKTAVKGRLQNAGQSC 238 (429)
T ss_pred EeCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCcceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCC
Confidence 99977778899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCceEEEeCccH-HHHHHHHHHHHhcccccCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCcEeeCCcccccCCCCCC
Q 001665 480 TALSTAVFVGSSV-QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENG 558 (1035)
Q Consensus 480 ~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d~~~~~Gpli~~~~~~rl~~~i~~av~~GAkvl~gG~~~~~p~~~~g 558 (1035)
+++++|||+++++ +|+++|+++++.+++|+|.++++++||++++.+++++.+++++++++|+++++||... ...|
T Consensus 239 ~a~~rv~v~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~----~~~g 314 (429)
T cd07100 239 IAAKRFIVHEDVYDEFLEKFVEAMAALKVGDPMDEDTDLGPLARKDLRDELHEQVEEAVAAGATLLLGGKRP----DGPG 314 (429)
T ss_pred CCCeEEEEcHHHHHHHHHHHHHHHHhccCCCCccCCCCccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcC----CCCC
Confidence 9999999999998 8999999999999999999999999999999999999999999999999999998642 1358
Q ss_pred ceeeceEEecCCCCCccccccccCcceeEEecCCHHHHHHHHHhcCCCcEEEEEcCCHHHHHHHHhccceeEEEEcCCcC
Q 001665 559 NFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPVP 638 (1035)
Q Consensus 559 ~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI~laN~~~~GLsasVfS~d~~~a~~~a~~l~sG~V~IN~~~~ 638 (1035)
+|++|||+.+++++|.+++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.++++++++++|.|+||++..
T Consensus 315 ~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~~~ 394 (429)
T cd07100 315 AFYPPTVLTDVTPGMPAYDEELFGPVAAVIKVKDEEEAIALANDSPFGLGGSVFTTDLERAERVARRLEAGMVFINGMVK 394 (429)
T ss_pred eEEcCEEeecCCCCCHHHhCCCCCCeEEEeeeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcCeEEECCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998743
Q ss_pred ----CCCCCCCCCCCCCcCcHHHHHhcceeeEEE
Q 001665 639 ----SSFSSINESGEFNFCGKSGVQFYTQIKTVA 668 (1035)
Q Consensus 639 ----~PfGG~g~SG~G~~~G~~g~~~ft~~k~v~ 668 (1035)
+||||+|.||+|+++|.+++++||+.|+++
T Consensus 395 ~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~ 428 (429)
T cd07100 395 SDPRLPFGGVKRSGYGRELGRFGIREFVNIKTVW 428 (429)
T ss_pred CCCCCCcCCccccccCCcchHHHHHHhcceeEEe
Confidence 899999999999999999999999999874
|
Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. |
| >cd07149 ALDH_y4uC Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-80 Score=733.87 Aligned_cols=441 Identities=31% Similarity=0.464 Sum_probs=412.5
Q ss_pred EEeecCCCCCeEEEecCCCHHHHHHHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHH
Q 001665 219 IDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQR 298 (1035)
Q Consensus 219 ~~v~nP~tGevi~~v~~~s~~dv~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e~La~~i~~etGk~~~eA~~ 298 (1035)
++++||+||+++++++.++.+++++++++|++||+.|+.++.++|.++|+++++.|+++.++|+++++.|+||+..++..
T Consensus 1 ~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 80 (453)
T cd07149 1 IEVISPYDGEVIGRVPVASEEDVEKAIAAAKEGAKEMKSLPAYERAEILERAAQLLEERREEFARTIALEAGKPIKDARK 80 (453)
T ss_pred CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHH
Confidence 35789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcCccccCC-C---CCCcceeeeccceeEEEECCCCcchhchHHHHHHHHhcCCEEEEeCCC
Q 001665 299 DVLFGLEVVEQACAVATLQIGEFVPNA-L---CGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSE 374 (1035)
Q Consensus 299 EV~~a~~~l~~~~~~a~~~~g~~~~~~-~---~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~ALaaGNaVVlKPS~ 374 (1035)
|+..+++.++++++.+....++..+.. . .+...+.+++|+|||++|+|||||+.++++++++||++||+||+|||+
T Consensus 81 ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VI~Kps~ 160 (453)
T cd07149 81 EVDRAIETLRLSAEEAKRLAGETIPFDASPGGEGRIGFTIREPIGVVAAITPFNFPLNLVAHKVGPAIAAGNAVVLKPAS 160 (453)
T ss_pred HHHHHHHHHHHHHHHHHHhcCccccccccCCCCCeeEEEEeecceEEEEECCCCChHHHHHHHHHHHHHcCCEEEEECCC
Confidence 999999999988876655544322211 1 122346789999999999999999999999999999999999999999
Q ss_pred CChhHHHHHHHHHHHhCCCCCcEEEeecch-hhHhhhhcCCCccEEEEeccchHHHHHHHHHHhcCCceeecCCCcceEE
Q 001665 375 KNPGTSMILAALAMEAGLPDGVLNIVHGTN-DVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAI 453 (1035)
Q Consensus 375 ~ap~ta~~L~ell~eAGlP~gvv~vV~g~~-e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~l~Pv~lElGGknp~I 453 (1035)
.+|.++.+|+++|.++|+|+|++++|+|+. +.+..|+.|+++|+|+||||+.+|+.|++.++ ++|+++|+|||||+|
T Consensus 161 ~~p~~~~~l~~~l~~ag~P~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~a~--~~~~~lelGGk~p~i 238 (453)
T cd07149 161 QTPLSALKLAELLLEAGLPKGALNVVTGSGETVGDALVTDPRVRMISFTGSPAVGEAIARKAG--LKKVTLELGSNAAVI 238 (453)
T ss_pred cchHHHHHHHHHHHHcCcCccceEEeecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHcC--CCceeeecCCCceEE
Confidence 999999999999999999999999999865 45889999999999999999999999998874 789999999999999
Q ss_pred EcCCCCHHHHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHhcccccCCCCCCCcCCCcCHHHHHHHHHH
Q 001665 454 IMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRL 532 (1035)
Q Consensus 454 V~~dADld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d~~~~~Gpli~~~~~~rl~~~ 532 (1035)
|++|||++.|++.|++++|+++||.|+++++|||+++++ +|+++|+++++.+++|+|.++++++||++++.+++++.++
T Consensus 239 V~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~ 318 (453)
T cd07149 239 VDADADLEKAVERCVSGAFANAGQVCISVQRIFVHEDIYDEFLERFVAATKKLVVGDPLDEDTDVGPMISEAEAERIEEW 318 (453)
T ss_pred ECCCCCHHHHHHHHHHHHHHhcCCCCCCCceEEEcHhHHHHHHHHHHHHHHhCCcCCCCCCCCccccccCHHHHHHHHHH
Confidence 999999999999999999999999999999999999998 9999999999999999999999999999999999999999
Q ss_pred HHHHHHCCCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecCCHHHHHHHHHhcCCCcEEEEE
Q 001665 533 IQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIF 612 (1035)
Q Consensus 533 i~~av~~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI~laN~~~~GLsasVf 612 (1035)
+++++.+|+++++||.. .|+|++|||+.++++++.+++||+||||++|++|+|++|||+++|+.+|||+++||
T Consensus 319 i~~a~~~ga~v~~gg~~-------~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gLt~~v~ 391 (453)
T cd07149 319 VEEAVEGGARLLTGGKR-------DGAILEPTVLTDVPPDMKVVCEEVFAPVVSLNPFDTLDEAIAMANDSPYGLQAGVF 391 (453)
T ss_pred HHHHHHCCCEEEeCCCC-------CCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEEeCCHHHHHHHHhCCCcCceEEEE
Confidence 99999999999999853 47899999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHhccceeEEEEcCCcC-----CCCCCCCCCCCCCcCcHHHHHhcceeeEEE
Q 001665 613 TSSGLAARKFQNEIEARLVGINVPVP-----SSFSSINESGEFNFCGKSGVQFYTQIKTVA 668 (1035)
Q Consensus 613 S~d~~~a~~~a~~l~sG~V~IN~~~~-----~PfGG~g~SG~G~~~G~~g~~~ft~~k~v~ 668 (1035)
|+|.+++.++++++++|.|+||+... +||||+|.||+|+++|++|+++|++.|++.
T Consensus 392 t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~~~ 452 (453)
T cd07149 392 TNDLQKALKAARELEVGGVMINDSSTFRVDHMPYGGVKESGTGREGPRYAIEEMTEIKLVC 452 (453)
T ss_pred cCCHHHHHHHHHHcCcCeEEECCCCCCCCCCCCcCCccccccCCCChHHHHHHhhceeEEe
Confidence 99999999999999999999997531 799999999999999999999999999875
|
Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. |
| >cd07146 ALDH_PhpJ Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-80 Score=730.79 Aligned_cols=437 Identities=29% Similarity=0.407 Sum_probs=408.1
Q ss_pred EeecCCCCCeEEEecCCCHHHHHHHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHH
Q 001665 220 DVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRD 299 (1035)
Q Consensus 220 ~v~nP~tGevi~~v~~~s~~dv~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e~La~~i~~etGk~~~eA~~E 299 (1035)
+++||+||+++++++.++.+++++++++|+++ |+.++.++|.++|++++++|++++++|++++++|+||++.+++.|
T Consensus 2 ~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~~---~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~e 78 (451)
T cd07146 2 EVRNPYTGEVVGTVPAGTEEALREALALAASY---RSTLTRYQRSAILNKAAALLEARREEFARLITLESGLCLKDTRYE 78 (451)
T ss_pred CccCCCCCCEEEEEcCCCHHHHHHHHHHHHHH---HhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHH
Confidence 47899999999999999999999999999875 888999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhcCccccCC----CCCCcceeeeccceeEEEECCCCcchhchHHHHHHHHhcCCEEEEeCCCC
Q 001665 300 VLFGLEVVEQACAVATLQIGEFVPNA----LCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEK 375 (1035)
Q Consensus 300 V~~a~~~l~~~~~~a~~~~g~~~~~~----~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~ALaaGNaVVlKPS~~ 375 (1035)
+..+++.+++++.......++..... ..+...+.+++|+|||++|+|||||+.++++++++||++||+||+|||+.
T Consensus 79 v~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~ALaaGN~VilKps~~ 158 (451)
T cd07146 79 VGRAADVLRFAAAEALRDDGESFSCDLTANGKARKIFTLREPLGVVLAITPFNHPLNQVAHKIAPAIAANNRIVLKPSEK 158 (451)
T ss_pred HHHHHHHHHHHHHHHHHhcCcccccccccCCCCceEEEEEeccceEEEEccCChHHHHHHHHHHHHHHcCCEEEEECCCC
Confidence 99999999999876655444322211 12334577899999999999999999999999999999999999999999
Q ss_pred ChhHHHHHHHHHHHhCCCCCcEEEeecc-hhhHhhhhcCCCccEEEEeccchHHHHHHHHHHhcCCceeecCCCcceEEE
Q 001665 376 NPGTSMILAALAMEAGLPDGVLNIVHGT-NDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAII 454 (1035)
Q Consensus 376 ap~ta~~L~ell~eAGlP~gvv~vV~g~-~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~l~Pv~lElGGknp~IV 454 (1035)
+|+++..|.++|.++|+|+|+|++++|+ .+.+..|+.|+++++|+||||+.+|+.|++.++ ++|+++|+|||||+||
T Consensus 159 ~p~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~i~~V~fTGs~~~g~~i~~~a~--~~~~~lElGG~~p~iV 236 (451)
T cd07146 159 TPLSAIYLADLLYEAGLPPDMLSVVTGEPGEIGDELITHPDVDLVTFTGGVAVGKAIAATAG--YKRQLLELGGNDPLIV 236 (451)
T ss_pred chHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhc--CCceeeecCCCceEEE
Confidence 9999999999999999999999999985 467899999999999999999999999998775 7899999999999999
Q ss_pred cCCCCHHHHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHhcccccCCCCCCCcCCCcCHHHHHHHHHHH
Q 001665 455 MPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLI 533 (1035)
Q Consensus 455 ~~dADld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d~~~~~Gpli~~~~~~rl~~~i 533 (1035)
++|||++.|++.|++++|+|+||.|+++++|||+++++ +|+++|+++++.+++|+|.++++++|||+++.+++++.+++
T Consensus 237 ~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~gpli~~~~~~~v~~~v 316 (451)
T cd07146 237 MDDADLERAATLAVAGSYANSGQRCTAVKRILVHESVADEFVDLLVEKSAALVVGDPMDPATDMGTVIDEEAAIQIENRV 316 (451)
T ss_pred CCCCCHHHHHHHHHHHHHhhCCCCCCCCceEEEchHHHHHHHHHHHHHHhcCCCCCCCCCCCCcCCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHHCCCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecCCHHHHHHHHHhcCCCcEEEEEc
Q 001665 534 QNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFT 613 (1035)
Q Consensus 534 ~~av~~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI~laN~~~~GLsasVfS 613 (1035)
++++++|+++++||.. .|.|++|||+.++++++.+++||+||||++|++|+|+||||+++|+++|||+++|||
T Consensus 317 ~~a~~~Ga~vl~gg~~-------~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t 389 (451)
T cd07146 317 EEAIAQGARVLLGNQR-------QGALYAPTVLDHVPPDAELVTEETFGPVAPVIRVKDLDEAIAISNSTAYGLSSGVCT 389 (451)
T ss_pred HHHHhCCCEEEeCCCc-------CCEEEcCEEeecCCCCCHHHhCCCCCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEC
Confidence 9999999999999852 488999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhccceeEEEEcCCc----C-CCCCCCCCCC-CCCcCcHHHHHhcceeeEEE
Q 001665 614 SSGLAARKFQNEIEARLVGINVPV----P-SSFSSINESG-EFNFCGKSGVQFYTQIKTVA 668 (1035)
Q Consensus 614 ~d~~~a~~~a~~l~sG~V~IN~~~----~-~PfGG~g~SG-~G~~~G~~g~~~ft~~k~v~ 668 (1035)
+|.+.+++++.++++|+|+||+.. . +||||+|.|| +|+.+|.+|+++||+.|++.
T Consensus 390 ~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~~g~~~g~~~~~~f~~~k~~~ 450 (451)
T cd07146 390 NDLDTIKRLVERLDVGTVNVNEVPGFRSELSPFGGVKDSGLGGKEGVREAMKEMTNVKTYS 450 (451)
T ss_pred CCHHHHHHHHHHCCcceEEECCCCCCCCCCCCcCcccccCCCcccChHHHHHHHhceeEEe
Confidence 999999999999999999999742 2 7999999999 58999999999999999874
|
Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. |
| >PLN02203 aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-79 Score=724.31 Aligned_cols=428 Identities=21% Similarity=0.264 Sum_probs=396.0
Q ss_pred CCCHHHHHHHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHH
Q 001665 235 LTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQ-RDVLFGLEVVEQACAV 313 (1035)
Q Consensus 235 ~~s~~dv~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e~La~~i~~etGk~~~eA~-~EV~~a~~~l~~~~~~ 313 (1035)
.+..+||++++++|++||+.|+.++..+|.++|++++++|+++.++|+++++.|+||++.+++ .||..+++.++++++.
T Consensus 2 ~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~~~~ 81 (484)
T PLN02203 2 EAPGETLEGSVAELRETYESGRTRSLEWRKSQLKGLLRLLKDNEEAIFKALHQDLGKHRVEAYRDEVGVLTKSANLALSN 81 (484)
T ss_pred CCCHHHHHHHHHHHHHHHHhcCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 356789999999999999999999999999999999999999999999999999999999995 6999999999999886
Q ss_pred HHhhcCcc---ccCCCCCCcceeeeccceeEEEECCCCcchhchHHHHHHHHhcCCEEEEeCCCCChhHHHHHHHHHHHh
Q 001665 314 ATLQIGEF---VPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEA 390 (1035)
Q Consensus 314 a~~~~g~~---~~~~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~ALaaGNaVVlKPS~~ap~ta~~L~ell~eA 390 (1035)
.....+.. .+....+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.+|++++.++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~reP~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~~ 161 (484)
T PLN02203 82 LKKWMAPKKAKLPLVAFPATAEVVPEPLGVVLIFSSWNFPIGLSLEPLIGAIAAGNAVVLKPSELAPATSAFLAANIPKY 161 (484)
T ss_pred HHHHhccccccCCcccCCceeEEEEecccEEEEEcCCcchHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHh
Confidence 65443321 111112345678899999999999999999999999999999999999999999999999999999986
Q ss_pred CCCCCcEEEeecchhhHhhhhcCCCccEEEEeccchHHHHHHHHHHhcCCceeecCCCcceEEEcC---CCCHHHHHHHH
Q 001665 391 GLPDGVLNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMP---DASIDATLNAL 467 (1035)
Q Consensus 391 GlP~gvv~vV~g~~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~l~Pv~lElGGknp~IV~~---dADld~Aa~~I 467 (1035)
+|+|+||+|+|+.+.+..|+.| .+|+|+||||+.+|+.|++.|+++++|+++|+|||||+||++ |||++.|++.+
T Consensus 162 -lP~gvv~vv~g~~~~~~~l~~~-~vd~v~fTGS~~~G~~v~~~aa~~l~~v~lElGGknp~iV~~d~~daDl~~aa~~i 239 (484)
T PLN02203 162 -LDSKAVKVIEGGPAVGEQLLQH-KWDKIFFTGSPRVGRIIMTAAAKHLTPVALELGGKCPCIVDSLSSSRDTKVAVNRI 239 (484)
T ss_pred -CCcCEEEEEeCCHHHHHHHHhC-CCCEEEEECCHHHHHHHHHHHHhcCCCEEEEecCCCeEEEccCCCCCCHHHHHHHH
Confidence 9999999999977889999999 599999999999999999999999999999999999999997 69999999999
Q ss_pred HHHHhc-cCCCCccCCceEEEeCccH-HHHHHHHHHHHhcccccCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCcEee
Q 001665 468 VSAGFG-AAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLL 545 (1035)
Q Consensus 468 v~s~f~-naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d~~~~~Gpli~~~~~~rl~~~i~~av~~GAkvl~ 545 (1035)
++++|. |+||.|++++++|||++++ +|+++|+++++++++|+|.+. .++||++++.+++++.++|++++.+ +++++
T Consensus 240 ~~~~f~~~aGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~G~p~~~-~~~Gpli~~~~~~~v~~~i~~a~~~-~~~~~ 317 (484)
T PLN02203 240 VGGKWGSCAGQACIAIDYVLVEERFAPILIELLKSTIKKFFGENPRES-KSMARILNKKHFQRLSNLLKDPRVA-ASIVH 317 (484)
T ss_pred HHHhcccCCCCccccCCeEEEcHHHHHHHHHHHHHHHHHhcCCCCCcC-CCcCCCCCHHHHHHHHHHHHHHHhC-CeEEe
Confidence 999996 8999999999999999998 999999999999999999875 6899999999999999999999887 78998
Q ss_pred CCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecCCHHHHHHHHHhcCCCcEEEEEcCCHHHHHHHHhc
Q 001665 546 DGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNE 625 (1035)
Q Consensus 546 gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI~laN~~~~GLsasVfS~d~~~a~~~a~~ 625 (1035)
||.. +..|+|++|||+.+++++|.+++||+||||++|++|+|++|||+++|+++|||++||||+|.+.+.+++++
T Consensus 318 gg~~-----~~~g~~i~PTvl~~v~~d~~i~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gL~a~vft~d~~~a~~~~~~ 392 (484)
T PLN02203 318 GGSI-----DEKKLFIEPTILLNPPLDSDIMTEEIFGPLLPIITVKKIEDSIAFINSKPKPLAIYAFTNNEKLKRRILSE 392 (484)
T ss_pred CCCc-----CCCCCEEeeEEEecCCCCCHHHhcCccCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHh
Confidence 8863 23689999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeEEEEcCCc-----C-CCCCCCCCCCCCCcCcHHHHHhcceeeEEEEec
Q 001665 626 IEARLVGINVPV-----P-SSFSSINESGEFNFCGKSGVQFYTQIKTVAQQW 671 (1035)
Q Consensus 626 l~sG~V~IN~~~-----~-~PfGG~g~SG~G~~~G~~g~~~ft~~k~v~~~~ 671 (1035)
+++|.|+||+.. . +||||+|.||+|+++|.+++++||+.|+|+..+
T Consensus 393 l~~G~V~IN~~~~~~~~~~~PfGG~k~SG~Gr~~g~~~l~~ft~~k~v~~~~ 444 (484)
T PLN02203 393 TSSGSVTFNDAIIQYACDSLPFGGVGESGFGRYHGKYSFDTFSHEKAVLRRS 444 (484)
T ss_pred CCcceEEECCcccccCCCCCCCCCcCcccCCccccHHHHHHhcceeEEEEcC
Confidence 999999999752 2 899999999999999999999999999998764
|
|
| >cd07095 ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-79 Score=716.16 Aligned_cols=419 Identities=28% Similarity=0.419 Sum_probs=391.5
Q ss_pred HHHHHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 001665 240 EFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIG 319 (1035)
Q Consensus 240 dv~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e~La~~i~~etGk~~~eA~~EV~~a~~~l~~~~~~a~~~~g 319 (1035)
|++++|++|++||+.|+.+++++|.++|+++++.|+++.++|+++++.|+||++.+++.|+..+++.++++++......+
T Consensus 1 ~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~ev~~~~~~~~~~~~~~~~~~~ 80 (431)
T cd07095 1 QVDAAVAAARAAFPGWAALSLEERAAILRRFAELLKANKEELARLISRETGKPLWEAQTEVAAMAGKIDISIKAYHERTG 80 (431)
T ss_pred CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 57899999999999999999999999999999999999999999999999999999999999999999998876655544
Q ss_pred ccccCCCCCCcceeeeccceeEEEECCCCcchhchHHHHHHHHhcCCEEEEeCCCCChhHHHHHHHHHHHhCCCCCcEEE
Q 001665 320 EFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNI 399 (1035)
Q Consensus 320 ~~~~~~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~ALaaGNaVVlKPS~~ap~ta~~L~ell~eAGlP~gvv~v 399 (1035)
..... ..+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++.+|+++|.++|+|+|++++
T Consensus 81 ~~~~~-~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VI~Kps~~~~~~~~~l~~~~~~ag~P~g~~~~ 159 (431)
T cd07095 81 ERATP-MAQGRAVLRHRPHGVMAVFGPFNFPGHLPNGHIVPALLAGNTVVFKPSELTPAVAELMVELWEEAGLPPGVLNL 159 (431)
T ss_pred CcccC-CCCceEEEEEecceEEEEECCCchHHHHHHHHHHHHHhcCCEEEeeCCCCCcHHHHHHHHHHHHhCcChhHheE
Confidence 32221 23456788999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eecchhhHhhhhcCCCccEEEEeccchHHHHHHHHHHhc-CCceeecCCCcceEEEcCCCCHHHHHHHHHHHHhccCCCC
Q 001665 400 VHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAAR-GKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGER 478 (1035)
Q Consensus 400 V~g~~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~-l~Pv~lElGGknp~IV~~dADld~Aa~~Iv~s~f~naGQ~ 478 (1035)
|+|+.+.+..|+.|+++|.|+||||+.+|+.|+++++.+ ++++.+|+|||||+||++|||++.|++.|++++|+|+||.
T Consensus 160 v~g~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~lElgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~ 239 (431)
T cd07095 160 VQGGRETGEALAAHEGIDGLLFTGSAATGLLLHRQFAGRPGKILALEMGGNNPLVVWDVADIDAAAYLIVQSAFLTAGQR 239 (431)
T ss_pred EeCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhhccCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 999778889999999999999999999999999987755 6999999999999999999999999999999999999999
Q ss_pred ccCCceEEEeCc-cH-HHHHHHHHHHHhcccccCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCcEeeCCcccccCCCC
Q 001665 479 CTALSTAVFVGS-SV-QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYE 556 (1035)
Q Consensus 479 C~a~~~vlV~~~-i~-~f~e~Lv~~~~~lkvG~p~d~~~~~Gpli~~~~~~rl~~~i~~av~~GAkvl~gG~~~~~p~~~ 556 (1035)
|+++++||||++ ++ +|+++|+++++++++|+|.++++++||++++.+++++.+++++++++|+++++||... ..
T Consensus 240 C~a~~rv~V~~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~i~~~v~~a~~~ga~~l~gg~~~----~~ 315 (431)
T cd07095 240 CTCARRLIVPDGAVGDAFLERLVEAAKRLRIGAPDAEPPFMGPLIIAAAAARYLLAQQDLLALGGEPLLAMERL----VA 315 (431)
T ss_pred CCCCeEEEEcCcchHHHHHHHHHHHHHhCCCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCEEEeCCCcC----CC
Confidence 999999999999 88 9999999999999999999999999999999999999999999999999999998642 23
Q ss_pred CCceeeceEEecCCCCCccccccccCcceeEEecCCHHHHHHHHHhcCCCcEEEEEcCCHHHHHHHHhccceeEEEEcCC
Q 001665 557 NGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVP 636 (1035)
Q Consensus 557 ~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI~laN~~~~GLsasVfS~d~~~a~~~a~~l~sG~V~IN~~ 636 (1035)
+|+|++|||+ +++++|.+++||+||||++|++|+|++|||+++|+++|||++||||+|.+.++++++++++|.|+||+.
T Consensus 316 ~g~~~~Ptv~-~v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~a~~~~~~l~~G~v~iN~~ 394 (431)
T cd07095 316 GTAFLSPGII-DVTDAADVPDEEIFGPLLQVYRYDDFDEAIALANATRFGLSAGLLSDDEALFERFLARIRAGIVNWNRP 394 (431)
T ss_pred CCeEEcCEEE-ecCCCChHHhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECCC
Confidence 6899999999 699999999999999999999999999999999999999999999999999999999999999999975
Q ss_pred cC-----CCCCCCCCCCCCCcCcHHHHHhccee
Q 001665 637 VP-----SSFSSINESGEFNFCGKSGVQFYTQI 664 (1035)
Q Consensus 637 ~~-----~PfGG~g~SG~G~~~G~~g~~~ft~~ 664 (1035)
.. +||||+|.||+|+.+|.+|+++|+.+
T Consensus 395 ~~~~~~~~PfGG~k~SG~G~~~g~~~~~~~~~~ 427 (431)
T cd07095 395 TTGASSTAPFGGVGLSGNHRPSAYYAADYCAYP 427 (431)
T ss_pred CCCCCCCCCCCCcccccCCCCChHHHHHHHhhh
Confidence 32 89999999999999999999966654
|
N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. |
| >cd07105 ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-79 Score=715.22 Aligned_cols=421 Identities=30% Similarity=0.463 Sum_probs=393.5
Q ss_pred HHHHHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 001665 240 EFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIG 319 (1035)
Q Consensus 240 dv~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e~La~~i~~etGk~~~eA~~EV~~a~~~l~~~~~~a~~~~g 319 (1035)
|+++++++|++||+.|+.++.++|+++|++++++|+++.++|++++++|+||+..+++.|+..+++.++++++......+
T Consensus 1 ~v~~ai~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~ei~~~~~~l~~~~~~~~~~~~ 80 (432)
T cd07105 1 DADQAVEAAAAAFPAWSKTPPSERRDILLKAADLLESRRDEFIEAMMEETGATAAWAGFNVDLAAGMLREAASLITQIIG 80 (432)
T ss_pred CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 57899999999999999999999999999999999999999999999999999988989999999999999887665433
Q ss_pred ccccCCCCCCcceeeeccceeEEEECCCCcchhchHHHHHHHHhcCCEEEEeCCCCChhHHHHHHHHHHHhCCCCCcEEE
Q 001665 320 EFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNI 399 (1035)
Q Consensus 320 ~~~~~~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~ALaaGNaVVlKPS~~ap~ta~~L~ell~eAGlP~gvv~v 399 (1035)
...+....+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++..|.+++.++|+|+|+||+
T Consensus 81 ~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~~~~aGlP~gv~~~ 160 (432)
T cd07105 81 GSIPSDKPGTLAMVVKEPVGVVLGIAPWNAPVILGTRAIAYPLAAGNTVVLKASELSPRTHWLIGRVFHEAGLPKGVLNV 160 (432)
T ss_pred eecccCCCCceeEEEEecceEEEEECCcCcHHHHHHHHHHHHHhcCCEEEEECCccChHHHHHHHHHHHHcCcCCCcEEE
Confidence 33332223445678899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eecch----hhHhhhhcCCCccEEEEeccchHHHHHHHHHHhcCCceeecCCCcceEEEcCCCCHHHHHHHHHHHHhccC
Q 001665 400 VHGTN----DVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAA 475 (1035)
Q Consensus 400 V~g~~----e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~l~Pv~lElGGknp~IV~~dADld~Aa~~Iv~s~f~na 475 (1035)
|+|+. +.+..|+.|++|+.|+||||+.+|+.|+++|+++++|+++|+|||||+||++|||++.|++.|++++|+|+
T Consensus 161 v~g~~~~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElgGk~p~iV~~dadl~~aa~~i~~~~~~~~ 240 (432)
T cd07105 161 VTHSPEDAPEVVEALIAHPAVRKVNFTGSTRVGRIIAETAAKHLKPVLLELGGKAPAIVLEDADLDAAANAALFGAFLNS 240 (432)
T ss_pred EeCCCCchHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEeCCCCCceEECCCCCHHHHHHHHHHHHHhcC
Confidence 99742 46889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccCCceEEEeCccH-HHHHHHHHHHHhcccccCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCcEeeCCcccccCC
Q 001665 476 GERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPG 554 (1035)
Q Consensus 476 GQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d~~~~~Gpli~~~~~~rl~~~i~~av~~GAkvl~gG~~~~~p~ 554 (1035)
||.|+++++|||+++++ +|+++|+++++++++| .+++||++++.+++++.++|++++++|+++++||....
T Consensus 241 GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g-----~~~~gp~i~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~--- 312 (432)
T cd07105 241 GQICMSTERIIVHESIADEFVEKLKAAAEKLFAG-----PVVLGSLVSAAAADRVKELVDDALSKGAKLVVGGLADE--- 312 (432)
T ss_pred CCCCcCCceEEEcHHHHHHHHHHHHHHHHhhcCC-----CCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCC---
Confidence 99999999999999998 9999999999999988 67899999999999999999999999999999987421
Q ss_pred CCCCceeeceEEecCCCCCccccccccCcceeEEecCCHHHHHHHHHhcCCCcEEEEEcCCHHHHHHHHhccceeEEEEc
Q 001665 555 YENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGIN 634 (1035)
Q Consensus 555 ~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI~laN~~~~GLsasVfS~d~~~a~~~a~~l~sG~V~IN 634 (1035)
...|.|++|||+.++++++.+++||+||||++|++|+|.||||+++|+.+|||++||||+|.+.++++++++++|.|+||
T Consensus 313 ~~~~~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~vN 392 (432)
T cd07105 313 SPSGTSMPPTILDNVTPDMDIYSEESFGPVVSIIRVKDEEEAVRIANDSEYGLSAAVFTRDLARALAVAKRIESGAVHIN 392 (432)
T ss_pred CCCCeEEeeEEEecCCCCCHHHhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEEC
Confidence 13689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCc----C-CCCCCCCCCCCCCcCcHHHHHhcceeeEEE
Q 001665 635 VPV----P-SSFSSINESGEFNFCGKSGVQFYTQIKTVA 668 (1035)
Q Consensus 635 ~~~----~-~PfGG~g~SG~G~~~G~~g~~~ft~~k~v~ 668 (1035)
++. + +||||+|.||+|+++|.+|+++|++.|++.
T Consensus 393 ~~~~~~~~~~PfgG~~~SG~G~~~g~~~l~~~~~~k~v~ 431 (432)
T cd07105 393 GMTVHDEPTLPHGGVKSSGYGRFNGKWGIDEFTETKWIT 431 (432)
T ss_pred CCCCCCCCCCCCCCcccccccccChHHHHHHhhceEEEe
Confidence 862 2 899999999999999999999999999875
|
Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. |
| >cd07104 ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-79 Score=715.05 Aligned_cols=422 Identities=31% Similarity=0.485 Sum_probs=397.9
Q ss_pred HHHHHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 001665 240 EFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIG 319 (1035)
Q Consensus 240 dv~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e~La~~i~~etGk~~~eA~~EV~~a~~~l~~~~~~a~~~~g 319 (1035)
|++++|+.|++||+.|+.++.++|.++|+++++.|++++++|+++++.|+||+..++..|+..+++.+++++.......+
T Consensus 1 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~ei~~~~~~l~~~~~~~~~~~~ 80 (431)
T cd07104 1 DVDRAYAAAAAAQKAWAATPPQERAAILRKAAEILEERRDEIADWLIRESGSTRPKAAFEVGAAIAILREAAGLPRRPEG 80 (431)
T ss_pred CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 58899999999999999999999999999999999999999999999999999999999999999999999887665544
Q ss_pred ccccCCCCCCcceeeeccceeEEEECCCCcchhchHHHHHHHHhcCCEEEEeCCCCChhH-HHHHHHHHHHhCCCCCcEE
Q 001665 320 EFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGT-SMILAALAMEAGLPDGVLN 398 (1035)
Q Consensus 320 ~~~~~~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~ALaaGNaVVlKPS~~ap~t-a~~L~ell~eAGlP~gvv~ 398 (1035)
...+....+...+.+++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.+ +..|.+++.++|+|+|++|
T Consensus 81 ~~~~~~~~g~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~l~~~l~~aGlP~gvv~ 160 (431)
T cd07104 81 EILPSDVPGKESMVRRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDSRTPVTGGLLIAEIFEEAGLPKGVLN 160 (431)
T ss_pred ccccCCCCCceeEEEEeeeeeEEEECCCCcHHHHHHHHHHHHHHcCCeEEeeCCCCChHHHHHHHHHHHHHcCCCcccEE
Confidence 433332245567889999999999999999999999999999999999999999999988 5689999999999999999
Q ss_pred Eeecch-hhHhhhhcCCCccEEEEeccchHHHHHHHHHHhcCCceeecCCCcceEEEcCCCCHHHHHHHHHHHHhccCCC
Q 001665 399 IVHGTN-DVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGE 477 (1035)
Q Consensus 399 vV~g~~-e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~l~Pv~lElGGknp~IV~~dADld~Aa~~Iv~s~f~naGQ 477 (1035)
+|+|+. +.+..|+.|+++++|+||||+.+|+.|+++++++++|+++|+|||||+||++|||++.|++.|++++|+|+||
T Consensus 161 ~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ 240 (431)
T cd07104 161 VVPGGGSEIGDALVEHPRVRMISFTGSTAVGRHIGELAGRHLKKVALELGGNNPLIVLDDADLDLAVSAAAFGAFLHQGQ 240 (431)
T ss_pred EeeCCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 999865 5788999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCceEEEeCccH-HHHHHHHHHHHhcccccCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCcEeeCCcccccCCCC
Q 001665 478 RCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYE 556 (1035)
Q Consensus 478 ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d~~~~~Gpli~~~~~~rl~~~i~~av~~GAkvl~gG~~~~~p~~~ 556 (1035)
.|+++++||||++++ +|+++|+++++.+++|+|.++++++||++++.+++++.+++++++.+|+++++||..
T Consensus 241 ~C~a~~~v~v~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~G~~~~~gg~~------- 313 (431)
T cd07104 241 ICMAAGRILVHESVYDEFVEKLVAKAKALPVGDPRDPDTVIGPLINERQVDRVHAIVEDAVAAGARLLTGGTY------- 313 (431)
T ss_pred CcccCcEEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCCC-------
Confidence 999999999999998 899999999999999999999999999999999999999999999999999998852
Q ss_pred CCceeeceEEecCCCCCccccccccCcceeEEecCCHHHHHHHHHhcCCCcEEEEEcCCHHHHHHHHhccceeEEEEcCC
Q 001665 557 NGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVP 636 (1035)
Q Consensus 557 ~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI~laN~~~~GLsasVfS~d~~~a~~~a~~l~sG~V~IN~~ 636 (1035)
.|+|++|||+.++++++.+++||+||||++|++|+|+||||+++|++++||+++|||+|.+++++++.++++|+|+||++
T Consensus 314 ~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~l~~g~v~iN~~ 393 (431)
T cd07104 314 EGLFYQPTVLSDVTPDMPIFREEIFGPVAPVIPFDDDEEAVELANDTEYGLSAAVFTRDLERAMAFAERLETGMVHINDQ 393 (431)
T ss_pred CCceECCEEeecCCCCChhhhCcCcCCeEEEEEECCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcCeEEECCC
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999986
Q ss_pred c----C-CCCCCCCCCCCCCcCcHHHHHhcceeeEEE
Q 001665 637 V----P-SSFSSINESGEFNFCGKSGVQFYTQIKTVA 668 (1035)
Q Consensus 637 ~----~-~PfGG~g~SG~G~~~G~~g~~~ft~~k~v~ 668 (1035)
. . +||||+|.||+|+++|.+|+++|++.|+++
T Consensus 394 ~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~~~ 430 (431)
T cd07104 394 TVNDEPHVPFGGVKASGGGRFGGPASLEEFTEWQWIT 430 (431)
T ss_pred CCCCCCCCCCCCcccccCCccchHHHHHHhhceeEEe
Confidence 3 2 899999999999999999999999999974
|
ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. |
| >cd07126 ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-78 Score=714.58 Aligned_cols=440 Identities=19% Similarity=0.237 Sum_probs=393.8
Q ss_pred eEEcCEEecCCCCCeEEeecCCCCCeEEEecCCCHHHHHHHHHHHHHhhHhh--hCCCHHHH----HHHHHHHHHHHHHh
Q 001665 204 NFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAW--KNTPVATR----QRIMFKLQELIRRD 277 (1035)
Q Consensus 204 ~~I~G~~~~~~~~~~~~v~nP~tGevi~~v~~~s~~dv~~av~~Ar~A~~~W--~~~s~~~R----~~iL~~la~~L~~~ 277 (1035)
+||||+|+.+ +..++++||+||+++++++.++.+|+++|+++|++||+.| ..++..+| .++|+++++.|+++
T Consensus 1 ~~i~g~~~~~--~~~~~~~nP~t~~~i~~~~~a~~~dv~~Av~aA~~A~~~W~~~~~~~~~R~l~~~~il~~~a~~l~~~ 78 (489)
T cd07126 1 NLVAGKWKGA--SNYTTLLDPLNGDKFISVPDTDEDEINEFVDSLRQCPKSGLHNPLKNPERYLLYGDVSHRVAHELRKP 78 (489)
T ss_pred CcCCCEEecC--CCcEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHhccccCCCHHHHhhhHHHHHHHHHHHHHcC
Confidence 4799999875 4679999999999999999999999999999999999998 55779999 89999999999998
Q ss_pred --HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCccc--cCCCCCCcceeeeccceeEEEECCCCcchhc
Q 001665 278 --IDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFV--PNALCGLDTYCFREPLGVCAGICPFNFPDMT 353 (1035)
Q Consensus 278 --~e~La~~i~~etGk~~~eA~~EV~~a~~~l~~~~~~a~~~~g~~~--~~~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~ 353 (1035)
.++|++++++|+||++.+++.||..+++.++++++......+... +....+...+++++|+|||++|+|||||+.+
T Consensus 79 ~~~~~la~~~~~e~GK~~~~a~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~v~r~P~GVV~~I~PwNfP~~l 158 (489)
T cd07126 79 EVEDFFARLIQRVAPKSDAQALGEVVVTRKFLENFAGDQVRFLARSFNVPGDHQGQQSSGYRWPYGPVAIITPFNFPLEI 158 (489)
T ss_pred CCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCCceeEEEEecceEEEEECCCchHHHH
Confidence 599999999999999999999999999999999987765544332 2222344668899999999999999999999
Q ss_pred hHHHHHHHHhcCCEEEEeCCCCChhHHHHHHHHHHHhCCCCCcEEEeecchhhHhhhhcCCCccEEEEeccchHHHHHHH
Q 001665 354 PLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYA 433 (1035)
Q Consensus 354 ~~~~l~~ALaaGNaVVlKPS~~ap~ta~~L~ell~eAGlP~gvv~vV~g~~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~ 433 (1035)
.++++++||++||+||+|||+.+|+++.+|++++.++|+|+|+||+|+|+++.+.+|+.|+++++|+||||+.+|+.|+.
T Consensus 159 ~~~~ia~ALaaGN~VVlKPSe~tp~~~~~l~~~~~~aGlP~gv~~vv~G~~~~~~~l~~~~~v~~V~FTGS~~vGr~i~~ 238 (489)
T cd07126 159 PALQLMGALFMGNKPLLKVDSKVSVVMEQFLRLLHLCGMPATDVDLIHSDGPTMNKILLEANPRMTLFTGSSKVAERLAL 238 (489)
T ss_pred HHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHHhCcCcCcEEEEeCCchhHHHHhcCCCCCEEEEECCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999996555677888999999999999999999988
Q ss_pred HHHhcCCceeecCCCcceEEEcCCC-CHHHHHHHHHHHHhccCCCCccCCceEEEeCcc-H-HHHHHHHHHHHhcccccC
Q 001665 434 RAAARGKRVQSNRGGKNYAIIMPDA-SIDATLNALVSAGFGAAGERCTALSTAVFVGSS-V-QWEDELVELAKALKVNVG 510 (1035)
Q Consensus 434 aAa~~l~Pv~lElGGknp~IV~~dA-Dld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i-~-~f~e~Lv~~~~~lkvG~p 510 (1035)
.++ +++.+|+|||||+||++|| |++.|+..+++++|.|+||.|++++|+|||+++ + +|+++|++.++++++|+
T Consensus 239 ~~g---~k~~lElgg~~~~IV~~Da~dld~a~~~~~~g~f~naGQ~C~a~~rv~V~~~i~~d~f~~~l~~~~~~~~~g~- 314 (489)
T cd07126 239 ELH---GKVKLEDAGFDWKILGPDVSDVDYVAWQCDQDAYACSGQKCSAQSILFAHENWVQAGILDKLKALAEQRKLED- 314 (489)
T ss_pred HhC---CCEEeecCCCCceEECCCcccHHHHHHHHHHHHHhcCCCcCCCCceEEEeCcchHHHHHHHHHHHHHhcccCC-
Confidence 765 5799999999999999999 999999999999999999999999999999995 5 89999999999998874
Q ss_pred CCCCCCcCCCcCHHHHHHHHHHHHHHHH-CCCcEeeCCcccccCCCCCC-ceeeceEEec------CCCCCccccccccC
Q 001665 511 TDASADVGPVVSVEVKDQISRLIQNAVD-NGASLLLDGRNIVVPGYENG-NFVGPTILRD------VTSNMECYKEEIFG 582 (1035)
Q Consensus 511 ~d~~~~~Gpli~~~~~~rl~~~i~~av~-~GAkvl~gG~~~~~p~~~~g-~fv~PTIl~~------v~~d~~i~~eEiFG 582 (1035)
+++||+++.. .+++.++++++++ +||++++||......+...+ .|++||||.. ++++|.+++||+||
T Consensus 315 ----~~~Gpli~~~-~~~v~~~i~~a~~~~Ga~~l~GG~~~~~~~~~~~~~~~~PTvl~~~~~~~~~~~~~~i~~eEiFG 389 (489)
T cd07126 315 ----LTIGPVLTWT-TERILDHVDKLLAIPGAKVLFGGKPLTNHSIPSIYGAYEPTAVFVPLEEIAIEENFELVTTEVFG 389 (489)
T ss_pred ----CcCCCCcCHH-HHHHHHHHHHHHhCCCCEEEeCCcccccccccCCcceecCeEEEeccccccCCCCCHHHhCCCcC
Confidence 4789999998 9999999999998 99999999974211000123 3899999842 57899999999999
Q ss_pred cceeEEecCC--HHHHHHHHHhcCCCcEEEEEcCCHHHHHHHHhccceeE--EEEcCCc-----C---CCCCCCCCCCCC
Q 001665 583 PVLLNMQADS--LEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARL--VGINVPV-----P---SSFSSINESGEF 650 (1035)
Q Consensus 583 PVL~V~~~~d--~eeAI~laN~~~~GLsasVfS~d~~~a~~~a~~l~sG~--V~IN~~~-----~---~PfGG~g~SG~G 650 (1035)
||++|++|+| ++|||+++|+++|||++||||+|..+++++++++++|. |+||... . +||||+|.||+|
T Consensus 390 PVl~V~~~~~~~~deai~~aN~~~~gL~~~vft~d~~~~~~~~~~~~~G~~~v~~n~~~~~~~~~~~~~pfgg~k~sg~g 469 (489)
T cd07126 390 PFQVVTEYKDEQLPLVLEALERMHAHLTAAVVSNDIRFLQEVLANTVNGTTYAGIRARTTGAPQNHWFGPAGDPRGAGIG 469 (489)
T ss_pred CEEEEEEECCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcceEEEEecCCCCCCCcccCcCCCCCCcccCCC
Confidence 9999999999 99999999999999999999999999999999999999 5588642 1 899999999998
Q ss_pred CcCc
Q 001665 651 NFCG 654 (1035)
Q Consensus 651 ~~~G 654 (1035)
+.+.
T Consensus 470 ~~~~ 473 (489)
T cd07126 470 TPEA 473 (489)
T ss_pred CHhH
Confidence 8653
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences. |
| >PRK11904 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-78 Score=759.50 Aligned_cols=462 Identities=26% Similarity=0.345 Sum_probs=425.5
Q ss_pred CCccceEEcCEEecCCCCCeEEeecCCCCC-eEEEecCCCHHHHHHHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHHh
Q 001665 199 NNRVSNFIGGKFVDLRGSATIDVINPATQE-VGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRD 277 (1035)
Q Consensus 199 ~~~~~~~I~G~~~~~~~~~~~~v~nP~tGe-vi~~v~~~s~~dv~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~ 277 (1035)
....+.+||| ++..++++||+|++ +|++++.++.+++++||++|++||+.|+.++.++|+++|++++++|+++
T Consensus 550 ~~~~~~~i~g------~~~~~~v~nP~~~~~~vg~v~~a~~~~v~~Ai~aA~~A~~~W~~~~~~~Ra~iL~kaAdll~~~ 623 (1038)
T PRK11904 550 QWQAGPIING------EGEARPVVSPADRRRVVGEVAFADAEQVEQALAAARAAFPAWSRTPVEERAAILERAADLLEAN 623 (1038)
T ss_pred CceecceEcC------CCCeEEEECCCCCCeeEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHh
Confidence 3466778888 35679999999987 9999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCcccc-CCCCCCcceeeeccceeEEEECCCCcchhchHH
Q 001665 278 IDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVP-NALCGLDTYCFREPLGVCAGICPFNFPDMTPLW 356 (1035)
Q Consensus 278 ~e~La~~i~~etGk~~~eA~~EV~~a~~~l~~~~~~a~~~~g~~~~-~~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~ 356 (1035)
+++|+.+++.|+||++.++..||..+++.+++++..+....+.... ....|..++..++|+|||++|+|||||+.++++
T Consensus 624 ~~eL~~l~~~E~GK~~~~a~~EV~eaid~lr~ya~~a~~~~~~~~~l~g~~ge~n~~~~~P~GVv~~IsPwNfPlai~~~ 703 (1038)
T PRK11904 624 RAELIALCVREAGKTLQDAIAEVREAVDFCRYYAAQARRLFGAPEKLPGPTGESNELRLHGRGVFVCISPWNFPLAIFLG 703 (1038)
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccCCCCCceeEEEEecceEEEEECCCccHHHHHHH
Confidence 9999999999999999999999999999999999887765433111 122466778899999999999999999999999
Q ss_pred HHHHHHhcCCEEEEeCCCCChhHHHHHHHHHHHhCCCCCcEEEeecch-hhHhhhhcCCCccEEEEeccchHHHHHHHHH
Q 001665 357 MFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGTN-DVINHICDDEDIKAISFVASSTASVQMYARA 435 (1035)
Q Consensus 357 ~l~~ALaaGNaVVlKPS~~ap~ta~~L~ell~eAGlP~gvv~vV~g~~-e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aA 435 (1035)
++++||++||+||+|||+.+|+++..++++|.++|+|+|+||+|+|++ +.+..|+.|++|++|+||||+.+|+.|.+.+
T Consensus 704 ~i~aALaaGNtVIlKPse~tpl~a~~l~~ll~eAGlP~gvl~lv~G~g~~vg~~Lv~~p~v~~V~FTGS~~~g~~I~~~~ 783 (1038)
T PRK11904 704 QVAAALAAGNTVIAKPAEQTPLIAAEAVKLLHEAGIPKDVLQLLPGDGATVGAALTADPRIAGVAFTGSTETARIINRTL 783 (1038)
T ss_pred HHHHHHHcCCEEEeeCCCcCHHHHHHHHHHHHHhCcCcceEEEeeCCchHHHHHHhcCCCcCeEEEECCHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999965 5889999999999999999999999999988
Q ss_pred Hhc---CCceeecCCCcceEEEcCCCCHHHHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHhcccccCC
Q 001665 436 AAR---GKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGT 511 (1035)
Q Consensus 436 a~~---l~Pv~lElGGknp~IV~~dADld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~ 511 (1035)
+.+ .+|+++|+|||||+||++|||++.|++.|++|+|.++||.|+++++|||+++++ +|++.|++.++++++|+|.
T Consensus 784 A~~~g~~~pvi~ElGGkNa~IV~~dAdld~Av~~iv~saF~~aGQ~CsA~~rl~V~~si~d~fl~~L~~~~~~l~vGdp~ 863 (1038)
T PRK11904 784 AARDGPIVPLIAETGGQNAMIVDSTALPEQVVDDVVTSAFRSAGQRCSALRVLFVQEDIADRVIEMLKGAMAELKVGDPR 863 (1038)
T ss_pred hhccCCCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEeHHHHHHHHHHHHHHHHhccCCCcc
Confidence 866 689999999999999999999999999999999999999999999999999998 8999999999999999999
Q ss_pred CCCCCcCCCcCHHHHHHHHHHHHHHHHCCCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecC
Q 001665 512 DASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQAD 591 (1035)
Q Consensus 512 d~~~~~Gpli~~~~~~rl~~~i~~av~~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~ 591 (1035)
+.++++||+|++.+++++.++|+++++ |+++++||.... ....|+|+.|||+.. .++.+++||+|||||+|++|+
T Consensus 864 d~~t~~GPvI~~~a~~~l~~~I~~a~~-ga~vl~gg~~~~--~~~~G~fv~PTvi~~--~~~~~~~eEiFGPVL~V~~~~ 938 (1038)
T PRK11904 864 LLSTDVGPVIDAEAKANLDAHIERMKR-EARLLAQLPLPA--GTENGHFVAPTAFEI--DSISQLEREVFGPILHVIRYK 938 (1038)
T ss_pred cccCCccCCCCHHHHHHHHHHHHHHHc-CCEEEeCCCCCC--CCCCceEEeeEEEcc--CCcHHhCCCCcCcEEEEEEeC
Confidence 999999999999999999999999876 899999986411 113699999999863 577889999999999999997
Q ss_pred --CHHHHHHHHHhcCCCcEEEEEcCCHHHHHHHHhccceeEEEEcCCcC------CCCCCCCCCCCC-CcCcHHHHHhcc
Q 001665 592 --SLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPVP------SSFSSINESGEF-NFCGKSGVQFYT 662 (1035)
Q Consensus 592 --d~eeAI~laN~~~~GLsasVfS~d~~~a~~~a~~l~sG~V~IN~~~~------~PfGG~g~SG~G-~~~G~~g~~~ft 662 (1035)
+++|||+++|+++|||+++|||+|.+++++++.++++|.|+||+... .||||+|.||.| ..||.++++.|+
T Consensus 939 ~~~ldeaI~~iN~t~yGLt~~IfS~d~~~~~~~~~~l~aG~vyIN~~~~ga~vg~qPFGG~~~SG~G~kaGG~~~L~~f~ 1018 (1038)
T PRK11904 939 ASDLDKVIDAINATGYGLTLGIHSRIEETADRIADRVRVGNVYVNRNQIGAVVGVQPFGGQGLSGTGPKAGGPHYLLRFA 1018 (1038)
T ss_pred CCCHHHHHHHHhCCCCCCEEEEEcCCHHHHHHHHHhCCEEEEEEeCCCccCCCCCCCCCCCCCCCCCCccchHHHHHHHh
Confidence 79999999999999999999999999999999999999999997532 699999999999 688999999999
Q ss_pred eeeEEEEec
Q 001665 663 QIKTVAQQW 671 (1035)
Q Consensus 663 ~~k~v~~~~ 671 (1035)
+.|+|.+.+
T Consensus 1019 ~~ktv~~~~ 1027 (1038)
T PRK11904 1019 TEKTVTVNT 1027 (1038)
T ss_pred ceEEEEEcc
Confidence 999998764
|
|
| >cd07135 ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-78 Score=708.75 Aligned_cols=423 Identities=23% Similarity=0.297 Sum_probs=393.1
Q ss_pred CCCHHHHHHHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHH
Q 001665 235 LTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQ-RDVLFGLEVVEQACAV 313 (1035)
Q Consensus 235 ~~s~~dv~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e~La~~i~~etGk~~~eA~-~EV~~a~~~l~~~~~~ 313 (1035)
+++.+|+++|+++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+||++.+++ .|+..+++.+++++..
T Consensus 1 ~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~ 80 (436)
T cd07135 1 YTPLDEIDSIHSRLRATFRSGKTKDLEYRLWQLKQLYWAVKDNEEAIVEALKKDLGRPPFETLLTEVSGVKNDILHMLKN 80 (436)
T ss_pred CCCHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHH
Confidence 368899999999999999999999999999999999999999999999999999999999997 5999999999999886
Q ss_pred HHhhcC-ccccCC---CCCCcceeeeccceeEEEECCCCcchhchHHHHHHHHhcCCEEEEeCCCCChhHHHHHHHHHHH
Q 001665 314 ATLQIG-EFVPNA---LCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAME 389 (1035)
Q Consensus 314 a~~~~g-~~~~~~---~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~ALaaGNaVVlKPS~~ap~ta~~L~ell~e 389 (1035)
+..... ...... ..+...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..|++++.+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~l~~l~~~ 160 (436)
T cd07135 81 LKKWAKDEKVKDGPLAFMFGKPRIRKEPLGVVLIIGPWNYPVLLALSPLVGAIAAGCTVVLKPSELTPHTAALLAELVPK 160 (436)
T ss_pred HHHhhCCcccCCcccccCCCceEEEeccCcEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCccChHHHHHHHHHHHH
Confidence 654322 211110 1234567899999999999999999999999999999999999999999999999999999999
Q ss_pred hCCCCCcEEEeecchhhHhhhhcCCCccEEEEeccchHHHHHHHHHHhcCCceeecCCCcceEEEcCCCCHHHHHHHHHH
Q 001665 390 AGLPDGVLNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMPDASIDATLNALVS 469 (1035)
Q Consensus 390 AGlP~gvv~vV~g~~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~l~Pv~lElGGknp~IV~~dADld~Aa~~Iv~ 469 (1035)
|+|+|+||+|+|+.+.+..|+.|+ +|.|+||||+.+|+.|+++++++++|+++|+|||||+||++|||++.|++.+++
T Consensus 161 -~lP~g~v~vv~g~~~~~~~l~~~~-vd~v~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~~~iV~~dADl~~aa~~i~~ 238 (436)
T cd07135 161 -YLDPDAFQVVQGGVPETTALLEQK-FDKIFYTGSGRVGRIIAEAAAKHLTPVTLELGGKSPVIVTKNADLELAAKRILW 238 (436)
T ss_pred -hCCcCEEEEEcCCchhHHHHHhCC-CCEEEEECCcHHHHHHHHHHHhcCCCeEEEccCCCcEEECCCCCHHHHHHHHHH
Confidence 699999999998766667799999 999999999999999999999999999999999999999999999999999999
Q ss_pred HHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHhcccccCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCcEeeCCc
Q 001665 470 AGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGR 548 (1035)
Q Consensus 470 s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d~~~~~Gpli~~~~~~rl~~~i~~av~~GAkvl~gG~ 548 (1035)
++|+++||.|+++++||||++++ +|+++|++.++.+++|+| ++++++||++++.+++++.++++++ |+++++||.
T Consensus 239 ~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p-~~~~~~gpli~~~~~~~i~~~v~~a---g~~v~~gg~ 314 (436)
T cd07135 239 GKFGNAGQICVAPDYVLVDPSVYDEFVEELKKVLDEFYPGGA-NASPDYTRIVNPRHFNRLKSLLDTT---KGKVVIGGE 314 (436)
T ss_pred HHhccCCceecCCCEEeccHHHHHHHHHHHHHHHHHhcCCCC-CCCCCcCCCCCHHHHHHHHHHHHhc---CCeEEECCC
Confidence 99999999999999999999998 999999999999999999 8899999999999999999999987 889999986
Q ss_pred ccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecCCHHHHHHHHHhcCCCcEEEEEcCCHHHHHHHHhccce
Q 001665 549 NIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEA 628 (1035)
Q Consensus 549 ~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI~laN~~~~GLsasVfS~d~~~a~~~a~~l~s 628 (1035)
. ...|+|++|||+.++++++.+++||+||||++|++|+|+||||+++|+++|||++||||+|...+++++.++++
T Consensus 315 ~-----~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~deai~~an~~~~gL~~~v~t~d~~~a~~~~~~l~~ 389 (436)
T cd07135 315 M-----DEATRFIPPTIVSDVSWDDSLMSEELFGPVLPIIKVDDLDEAIKVINSRDTPLALYIFTDDKSEIDHILTRTRS 389 (436)
T ss_pred c-----CCCCCEEccEEEecCCCccHHHhccccCCceEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHhcCCc
Confidence 4 23689999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEcCCc-----C-CCCCCCCCCCCCCcCcHHHHHhcceeeEEE
Q 001665 629 RLVGINVPV-----P-SSFSSINESGEFNFCGKSGVQFYTQIKTVA 668 (1035)
Q Consensus 629 G~V~IN~~~-----~-~PfGG~g~SG~G~~~G~~g~~~ft~~k~v~ 668 (1035)
|.|+||+.. . +||||+|.||+|+++|.+|+++|++.|++.
T Consensus 390 g~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~i~ 435 (436)
T cd07135 390 GGVVINDTLIHVGVDNAPFGGVGDSGYGAYHGKYGFDTFTHERTVV 435 (436)
T ss_pred CeEEECCccccccCCCCCcCCcCcccCCccccHhHHHHhccccccc
Confidence 999999752 2 899999999999999999999999999863
|
Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD. |
| >PRK10090 aldehyde dehydrogenase A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-78 Score=702.53 Aligned_cols=401 Identities=28% Similarity=0.395 Sum_probs=375.8
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCccccCCCCCCcceeeeccceeEEEECC
Q 001665 267 MFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICP 346 (1035)
Q Consensus 267 L~~la~~L~~~~e~La~~i~~etGk~~~eA~~EV~~a~~~l~~~~~~a~~~~g~~~~~~~~g~~~~~~~ePlGVV~iI~P 346 (1035)
|++++++|++++++|++++++|+||++.+++.|+..+++.+++++.++....+........+...+++++|+|||++|+|
T Consensus 1 L~~~a~~l~~~~~el~~~~~~e~Gk~~~ea~~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (409)
T PRK10090 1 LRKIAAGIRERASEISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGILP 80 (409)
T ss_pred CHHHHHHHHHCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCCCCCCceeEEEEecccEEEEECC
Confidence 57899999999999999999999999999999999999999999887766554433222234456888999999999999
Q ss_pred CCcchhchHHHHHHHHhcCCEEEEeCCCCChhHHHHHHHHHHHhCCCCCcEEEeecc-hhhHhhhhcCCCccEEEEeccc
Q 001665 347 FNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGT-NDVINHICDDEDIKAISFVASS 425 (1035)
Q Consensus 347 ~N~Pl~~~~~~l~~ALaaGNaVVlKPS~~ap~ta~~L~ell~eAGlP~gvv~vV~g~-~e~~~~L~~h~~vd~V~fTGS~ 425 (1035)
||||+.++++++++||++||+||+|||+.+|.++..|++++.++|+|+|+||+|+|+ .+.+..|+.|+++++|+||||+
T Consensus 81 ~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~ 160 (409)
T PRK10090 81 WNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPKGVFNLVLGRGETVGQELAGNPKVAMVSMTGSV 160 (409)
T ss_pred CchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHcCCCcccEEEEeCCChhHHHHHhcCCCcCEEEEECCH
Confidence 999999999999999999999999999999999999999999999999999999994 5678899999999999999999
Q ss_pred hHHHHHHHHHHhcCCceeecCCCcceEEEcCCCCHHHHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHh
Q 001665 426 TASVQMYARAAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKA 504 (1035)
Q Consensus 426 ~vG~~I~~aAa~~l~Pv~lElGGknp~IV~~dADld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~ 504 (1035)
.+|+.|+++++++++|+++|+|||||+||++|||++.|++.|++++|.|+||.|+++++|||+++++ +|+++|++++++
T Consensus 161 ~~g~~v~~~aa~~~~~~~lElgGk~p~iV~~dADld~aa~~iv~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~ 240 (409)
T PRK10090 161 SAGEKIMAAAAKNITKVCLELGGKAPAIVMDDADLDLAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQA 240 (409)
T ss_pred HHHHHHHHHHHhcCCeEEEECCCCCeEEEcCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEcHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999999999999999999998 999999999999
Q ss_pred cccccCCCC-CCCcCCCcCHHHHHHHHHHHHHHHHCCCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCc
Q 001665 505 LKVNVGTDA-SADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGP 583 (1035)
Q Consensus 505 lkvG~p~d~-~~~~Gpli~~~~~~rl~~~i~~av~~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGP 583 (1035)
+++|+|.++ ++++|||+++.+++++.++|++++++||++++||... ...|+|++|||+.+++++|.+++||+|||
T Consensus 241 ~~~G~p~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~----~~~g~~~~Ptvl~~v~~~~~i~~eE~FgP 316 (409)
T PRK10090 241 VQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAV----EGKGYYYPPTLLLDVRQEMSIMHEETFGP 316 (409)
T ss_pred cCCCCCCCcccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcC----CCCCeEEecEEEeCCCCCCHHHhCCCCCc
Confidence 999999987 8999999999999999999999999999999998642 23589999999999999999999999999
Q ss_pred ceeEEecCCHHHHHHHHHhcCCCcEEEEEcCCHHHHHHHHhccceeEEEEcCCcC----CCCCCCCCCCCCCcCcHHHHH
Q 001665 584 VLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPVP----SSFSSINESGEFNFCGKSGVQ 659 (1035)
Q Consensus 584 VL~V~~~~d~eeAI~laN~~~~GLsasVfS~d~~~a~~~a~~l~sG~V~IN~~~~----~PfGG~g~SG~G~~~G~~g~~ 659 (1035)
|++|++|+|++|||+++|+++|||+++|||+|.+.+.++++++++|.|+||+... .||||+|.||+|+++|.+|++
T Consensus 317 vl~v~~~~~~~eai~~~n~~~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~gl~ 396 (409)
T PRK10090 317 VLPVVAFDTLEEAIAMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGIGGADGKHGLH 396 (409)
T ss_pred eEEEEEECCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccccCCccchHHHHH
Confidence 9999999999999999999999999999999999999999999999999998632 799999999999999999999
Q ss_pred hcceeeEEEEec
Q 001665 660 FYTQIKTVAQQW 671 (1035)
Q Consensus 660 ~ft~~k~v~~~~ 671 (1035)
+||+.|++++.|
T Consensus 397 ~f~~~k~v~~~~ 408 (409)
T PRK10090 397 EYLQTQVVYLQS 408 (409)
T ss_pred HhcceEEEEEec
Confidence 999999997653
|
|
| >cd07136 ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydrogenase ywdH-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-77 Score=702.76 Aligned_cols=415 Identities=24% Similarity=0.330 Sum_probs=385.3
Q ss_pred HHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHhhcCc-
Q 001665 243 DAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQ-RDVLFGLEVVEQACAVATLQIGE- 320 (1035)
Q Consensus 243 ~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e~La~~i~~etGk~~~eA~-~EV~~a~~~l~~~~~~a~~~~g~- 320 (1035)
+.+++|++||+.|+.++..+|.++|++++++|+++.++|+++++.|+||++.+++ .|+..+++.++++++.+....+.
T Consensus 2 ~~v~~a~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~ 81 (449)
T cd07136 2 SLVEKQRAFFKTGATKDVEFRIEQLKKLKQAIKKYENEILEALKKDLGKSEFEAYMTEIGFVLSEINYAIKHLKKWMKPK 81 (449)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 5789999999999999999999999999999999999999999999999999997 59999999999998876554332
Q ss_pred cccCC--CCCCcceeeeccceeEEEECCCCcchhchHHHHHHHHhcCCEEEEeCCCCChhHHHHHHHHHHHhCCCCCcEE
Q 001665 321 FVPNA--LCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLN 398 (1035)
Q Consensus 321 ~~~~~--~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~ALaaGNaVVlKPS~~ap~ta~~L~ell~eAGlP~gvv~ 398 (1035)
..... ..+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..|++++.++ +|+|++|
T Consensus 82 ~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vi~Kps~~tp~~~~~l~~~~~~a-lP~gv~~ 160 (449)
T cd07136 82 RVKTPLLNFPSKSYIYYEPYGVVLIIAPWNYPFQLALAPLIGAIAAGNTAVLKPSELTPNTSKVIAKIIEET-FDEEYVA 160 (449)
T ss_pred ccCCccccCCceeEEEEecCeEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECcccchHHHHHHHHHHHHh-CCCCEEE
Confidence 12111 12345678899999999999999999999999999999999999999999999999999999998 9999999
Q ss_pred EeecchhhHhhhhcCCCccEEEEeccchHHHHHHHHHHhcCCceeecCCCcceEEEcCCCCHHHHHHHHHHHHhccCCCC
Q 001665 399 IVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGER 478 (1035)
Q Consensus 399 vV~g~~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~l~Pv~lElGGknp~IV~~dADld~Aa~~Iv~s~f~naGQ~ 478 (1035)
+|+|+.+.+..|+.|+ |++|.||||+++|+.|++.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.
T Consensus 161 ~v~g~~~~~~~L~~~~-v~~V~fTGS~~~g~~i~~~aa~~~~~v~lElgGknp~iV~~dADld~aa~~i~~~~~~~~GQ~ 239 (449)
T cd07136 161 VVEGGVEENQELLDQK-FDYIFFTGSVRVGKIVMEAAAKHLTPVTLELGGKSPCIVDEDANLKLAAKRIVWGKFLNAGQT 239 (449)
T ss_pred EEeCChHHHHHHhcCC-CCEEEEECCHHHHHHHHHHHHhcCCCEEEEecCCCeEEECCCCCHHHHHHHHHHHHHcccCCc
Confidence 9999778889999765 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCceEEEeCccH-HHHHHHHHHHHhcccccCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCcEeeCCcccccCCCCC
Q 001665 479 CTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYEN 557 (1035)
Q Consensus 479 C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d~~~~~Gpli~~~~~~rl~~~i~~av~~GAkvl~gG~~~~~p~~~~ 557 (1035)
|+++++|||+++++ +|+++|+++++++++|+|.+ ++++||++++.+++++.++|+++ ++++||.. +.+
T Consensus 240 C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~g~p~~-~~~~gpli~~~~~~~i~~~i~~a-----~~~~gG~~-----~~~ 308 (449)
T cd07136 240 CVAPDYVLVHESVKEKFIKELKEEIKKFYGEDPLE-SPDYGRIINEKHFDRLAGLLDNG-----KIVFGGNT-----DRE 308 (449)
T ss_pred ccCCCEEEEcHHHHHHHHHHHHHHHHHhcCCCCCC-CCCccCcCCHHHHHHHHHHHhcc-----eEEECCCc-----CCC
Confidence 99999999999998 99999999999999999987 88999999999999999999863 89999863 236
Q ss_pred CceeeceEEecCCCCCccccccccCcceeEEecCCHHHHHHHHHhcCCCcEEEEEcCCHHHHHHHHhccceeEEEEcCCc
Q 001665 558 GNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPV 637 (1035)
Q Consensus 558 g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI~laN~~~~GLsasVfS~d~~~a~~~a~~l~sG~V~IN~~~ 637 (1035)
|+|++|||+.+++++|.+++||+||||++|++|+|+||||+++|+++|||+++|||+|...+.+++.++++|.|+||...
T Consensus 309 g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~ 388 (449)
T cd07136 309 TLYIEPTILDNVTWDDPVMQEEIFGPILPVLTYDTLDEAIEIIKSRPKPLALYLFSEDKKVEKKVLENLSFGGGCINDTI 388 (449)
T ss_pred CCEEeeEEEecCCCcChHHhccccCCeeEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCcc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999752
Q ss_pred -----C-CCCCCCCCCCCCCcCcHHHHHhcceeeEEEEe
Q 001665 638 -----P-SSFSSINESGEFNFCGKSGVQFYTQIKTVAQQ 670 (1035)
Q Consensus 638 -----~-~PfGG~g~SG~G~~~G~~g~~~ft~~k~v~~~ 670 (1035)
. +||||+|.||+|+++|.+++++||+.|+|+..
T Consensus 389 ~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~ 427 (449)
T cd07136 389 MHLANPYLPFGGVGNSGMGSYHGKYSFDTFSHKKSILKK 427 (449)
T ss_pred ccccCCCCCccCcCcccCCcccCHHHHHHhccceEEEEc
Confidence 2 89999999999999999999999999999865
|
Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD. |
| >cd07137 ALDH_F3FHI Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-77 Score=700.10 Aligned_cols=417 Identities=23% Similarity=0.283 Sum_probs=385.8
Q ss_pred HHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHhhcCc-
Q 001665 243 DAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQ-RDVLFGLEVVEQACAVATLQIGE- 320 (1035)
Q Consensus 243 ~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e~La~~i~~etGk~~~eA~-~EV~~a~~~l~~~~~~a~~~~g~- 320 (1035)
++++.|++||+.|+.++.++|.++|++++++|++++++|++++++|+||++.++. .|+..+++.+++++.......+.
T Consensus 3 ~a~~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~ 82 (432)
T cd07137 3 RLVRELRETFRSGRTRSAEWRKSQLKGLLRLVDENEDDIFAALRQDLGKPSAESFRDEVSVLVSSCKLAIKELKKWMAPE 82 (432)
T ss_pred HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 5899999999999999999999999999999999999999999999999999986 49999999999998866443322
Q ss_pred c--ccCCCCCCcceeeeccceeEEEECCCCcchhchHHHHHHHHhcCCEEEEeCCCCChhHHHHHHHHHHHhCCCCCcEE
Q 001665 321 F--VPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLN 398 (1035)
Q Consensus 321 ~--~~~~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~ALaaGNaVVlKPS~~ap~ta~~L~ell~eAGlP~gvv~ 398 (1035)
. .+....+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++.+|+++|.++ +|+|++|
T Consensus 83 ~~~~~~~~~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~~~~~~-~P~gvv~ 161 (432)
T cd07137 83 KVKTPLTTFPAKAEIVSEPLGVVLVISAWNFPFLLSLEPVIGAIAAGNAVVLKPSELAPATSALLAKLIPEY-LDTKAIK 161 (432)
T ss_pred ccCCCcccCCceeEEEEecCcEEEEEcCCchHHHHHHHHHHHHHhcCCEEEEECCCcChHHHHHHHHHHHHh-CCcCeEE
Confidence 1 111012234577899999999999999999999999999999999999999999999999999999995 9999999
Q ss_pred EeecchhhHhhhhcCCCccEEEEeccchHHHHHHHHHHhcCCceeecCCCcceEEEcCCCCHHHHHHHHHHHHh-ccCCC
Q 001665 399 IVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGF-GAAGE 477 (1035)
Q Consensus 399 vV~g~~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~l~Pv~lElGGknp~IV~~dADld~Aa~~Iv~s~f-~naGQ 477 (1035)
+|+|+.+.+..|+.| .+++|+||||+.+|+.|++.++++++|+++|+|||||+||++|||++.|++.+++++| +|+||
T Consensus 162 ~v~g~~~~~~~L~~~-~i~~v~fTGs~~~g~~v~~~aa~~~~~~~lElgG~np~iV~~dAdl~~aa~~i~~~~f~~~~GQ 240 (432)
T cd07137 162 VIEGGVPETTALLEQ-KWDKIFFTGSPRVGRIIMAAAAKHLTPVTLELGGKCPVIVDSTVDLKVAVRRIAGGKWGCNNGQ 240 (432)
T ss_pred EEeCCHHHHHHHHhC-CCCEEEEECChHHHHHHHHHHHhcCCcEEEEccCCCcEEEcCCCCHHHHHHHHHHHhhhccCCC
Confidence 999977888899987 6999999999999999999999999999999999999999999999999999999999 59999
Q ss_pred CccCCceEEEeCccH-HHHHHHHHHHHhcccccCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCcEeeCCcccccCCCC
Q 001665 478 RCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYE 556 (1035)
Q Consensus 478 ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d~~~~~Gpli~~~~~~rl~~~i~~av~~GAkvl~gG~~~~~p~~~ 556 (1035)
.|++++++|||++++ +|+++|+++++++++|+| +.++++||++++.+++++.++|++++. |+++++||.. ..
T Consensus 241 ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p-~~~~~~gpli~~~~~~~v~~~i~~a~~-ga~~l~gg~~-----~~ 313 (432)
T cd07137 241 ACIAPDYVLVEESFAPTLIDALKNTLEKFFGENP-KESKDLSRIVNSHHFQRLSRLLDDPSV-ADKIVHGGER-----DE 313 (432)
T ss_pred cccCCCEEEEcHHHHHHHHHHHHHHHHHHhCCCC-CccCCcCCcCCHHHHHHHHHHHHHHHh-CCeEEeCCCc-----CC
Confidence 999999999999998 999999999999999999 458899999999999999999999998 8999999863 23
Q ss_pred CCceeeceEEecCCCCCccccccccCcceeEEecCCHHHHHHHHHhcCCCcEEEEEcCCHHHHHHHHhccceeEEEEcCC
Q 001665 557 NGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVP 636 (1035)
Q Consensus 557 ~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI~laN~~~~GLsasVfS~d~~~a~~~a~~l~sG~V~IN~~ 636 (1035)
+|+|++|||+.+++++|.+++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.+++++.++++|.|+||+.
T Consensus 314 ~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~ 393 (432)
T cd07137 314 KNLYIEPTILLDPPLDSSIMTEEIFGPLLPIITVKKIEESIEIINSRPKPLAAYVFTKNKELKRRIVAETSSGGVTFNDT 393 (432)
T ss_pred CCCEEeeEEEecCCCcchhhhcccccCceEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcCcEEECCc
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999975
Q ss_pred c-----C-CCCCCCCCCCCCCcCcHHHHHhcceeeEEE
Q 001665 637 V-----P-SSFSSINESGEFNFCGKSGVQFYTQIKTVA 668 (1035)
Q Consensus 637 ~-----~-~PfGG~g~SG~G~~~G~~g~~~ft~~k~v~ 668 (1035)
. . +||||+|.||+|+++|.+++++|++.|+++
T Consensus 394 ~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~f~~~k~v~ 431 (432)
T cd07137 394 VVQYAIDTLPFGGVGESGFGAYHGKFSFDAFSHKKAVL 431 (432)
T ss_pred cccccCCCCCCCCcCcCcCCccccHHHHHHhccCceee
Confidence 2 2 799999999999999999999999999874
|
Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress. |
| >cd07133 ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-76 Score=694.78 Aligned_cols=420 Identities=23% Similarity=0.296 Sum_probs=384.7
Q ss_pred HHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCC-HHHHH-HHHHHHHHHHHHHHHHHHhhcCc
Q 001665 243 DAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTT-LKAAQ-RDVLFGLEVVEQACAVATLQIGE 320 (1035)
Q Consensus 243 ~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e~La~~i~~etGk~-~~eA~-~EV~~a~~~l~~~~~~a~~~~g~ 320 (1035)
..+++|++||+.|+.++..+|.++|++++++|+++.++|++++++|+||+ ..++. .|+..+++.+++++.......+.
T Consensus 2 ~~~~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~ea~~~ev~~~i~~~~~~~~~~~~~~~~ 81 (434)
T cd07133 2 ALLERQKAAFLANPPPSLEERRDRLDRLKALLLDNQDALAEAISADFGHRSRHETLLAEILPSIAGIKHARKHLKKWMKP 81 (434)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 36788999999999999999999999999999999999999999999985 56774 59999999999998766543322
Q ss_pred cc-cC--CCCCCcceeeeccceeEEEECCCCcchhchHHHHHHHHhcCCEEEEeCCCCChhHHHHHHHHHHHhCCCCCcE
Q 001665 321 FV-PN--ALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVL 397 (1035)
Q Consensus 321 ~~-~~--~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~ALaaGNaVVlKPS~~ap~ta~~L~ell~eAGlP~gvv 397 (1035)
.. .. ...+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++.+++++|.++ +|+|+|
T Consensus 82 ~~~~~~~~~~~~~~~~~~~P~Gvv~~I~pwN~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~l~~~a-lP~g~~ 160 (434)
T cd07133 82 SRRHVGLLFLPAKAEVEYQPLGVVGIIVPWNYPLYLALGPLIAALAAGNRVMIKPSEFTPRTSALLAELLAEY-FDEDEV 160 (434)
T ss_pred cccCCccccCCCceEEEEecccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHh-CCcCeE
Confidence 11 11 112345678999999999999999999999999999999999999999999999999999999997 999999
Q ss_pred EEeecchhhHhhhhcCCCccEEEEeccchHHHHHHHHHHhcCCceeecCCCcceEEEcCCCCHHHHHHHHHHHHhccCCC
Q 001665 398 NIVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGE 477 (1035)
Q Consensus 398 ~vV~g~~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~l~Pv~lElGGknp~IV~~dADld~Aa~~Iv~s~f~naGQ 477 (1035)
++|+|+.+.+..|+.|+ +++|+||||+.+|+.|++.++++++|+++|+|||||+||++|||++.|++.|++++|+|+||
T Consensus 161 ~~v~g~~~~~~~l~~~~-v~~V~ftGs~~~g~~v~~~aa~~~~~~~lElgGk~~~iV~~dadl~~aa~~i~~~~~~~~GQ 239 (434)
T cd07133 161 AVVTGGADVAAAFSSLP-FDHLLFTGSTAVGRHVMRAAAENLTPVTLELGGKSPAIIAPDADLAKAAERIAFGKLLNAGQ 239 (434)
T ss_pred EEEeCChHHHHHHHhCC-CCEEEEeCchHHHHHHHHHHHhcCceEEEEccCCCcEEEeCCCCHHHHHHHHHHHHhccCCC
Confidence 99999777888888765 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCceEEEeCccH-HHHHHHHHHHHhcccccCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCcEeeCCcccccCCCC
Q 001665 478 RCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYE 556 (1035)
Q Consensus 478 ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d~~~~~Gpli~~~~~~rl~~~i~~av~~GAkvl~gG~~~~~p~~~ 556 (1035)
.|+++++|||+++++ +|+++|+++++++++|+ +.++++||++++.+++++.++|++++++|+++++||.... ...
T Consensus 240 ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~--~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~--~~~ 315 (434)
T cd07133 240 TCVAPDYVLVPEDKLEEFVAAAKAAVAKMYPTL--ADNPDYTSIINERHYARLQGLLEDARAKGARVIELNPAGE--DFA 315 (434)
T ss_pred cccCCCEEEEcHHHHHHHHHHHHHHHHHhcCCC--CCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEecCCCCc--CCC
Confidence 999999999999988 99999999999999886 4678999999999999999999999999999999986421 114
Q ss_pred CCceeeceEEecCCCCCccccccccCcceeEEecCCHHHHHHHHHhcCCCcEEEEEcCCHHHHHHHHhccceeEEEEcCC
Q 001665 557 NGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVP 636 (1035)
Q Consensus 557 ~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI~laN~~~~GLsasVfS~d~~~a~~~a~~l~sG~V~IN~~ 636 (1035)
.|.|++|||+.++++++.+++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|.|+||+.
T Consensus 316 ~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~G~v~iN~~ 395 (434)
T cd07133 316 ATRKLPPTLVLNVTDDMRVMQEEIFGPILPILTYDSLDEAIDYINARPRPLALYYFGEDKAEQDRVLRRTHSGGVTINDT 395 (434)
T ss_pred CCcEEeeEEEeCCCCCCcccccccCCCeeEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCc
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999975
Q ss_pred c-----C-CCCCCCCCCCCCCcCcHHHHHhcceeeEEE
Q 001665 637 V-----P-SSFSSINESGEFNFCGKSGVQFYTQIKTVA 668 (1035)
Q Consensus 637 ~-----~-~PfGG~g~SG~G~~~G~~g~~~ft~~k~v~ 668 (1035)
. . +||||+|.||+|+++|.+|+++||+.|+|+
T Consensus 396 ~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~ 433 (434)
T cd07133 396 LLHVAQDDLPFGGVGASGMGAYHGKEGFLTFSHAKPVF 433 (434)
T ss_pred ccccCCCCCCcCCCCcccCCCcCCHHHHHHhcccceec
Confidence 3 2 899999999999999999999999999874
|
Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD. |
| >KOG2454 consensus Betaine aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-78 Score=649.14 Aligned_cols=475 Identities=23% Similarity=0.347 Sum_probs=435.3
Q ss_pred CCCeEEeecCCCCCeEEEecCCCHHHHHHHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHH
Q 001665 215 GSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLK 294 (1035)
Q Consensus 215 ~~~~~~v~nP~tGevi~~v~~~s~~dv~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e~La~~i~~etGk~~~ 294 (1035)
+..+++.+.|+||..+++++..++.||++.|..|++||+.|...++..|.++|+.|.+.|-+|+|.+++..++|+||+..
T Consensus 62 ~~~~vqCycPatg~yLG~fp~~~~tdide~v~la~kAQktW~~ssF~~Rr~fL~~L~~yIi~nQdliaevacrDtGKTmv 141 (583)
T KOG2454|consen 62 SDKKVQCYCPATGKYLGYFPALSPTDIDERVTLARKAQKTWAQSSFKLRRQFLRILLKYIIENQDLIAEVACRDTGKTMV 141 (583)
T ss_pred CCCceEEecCCCcceeeecccCChhhHHHHHHHHHHHHhhhhhccHHHHHHHHHHHHHHHhhchhheeeeeecccCchhh
Confidence 44679999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HH-HHHHHHHHHHHHHHHHHHH-hhcCccccCC--CCCCcceeeeccceeEEEECCCCcchhchHHHHHHHHhcCCEEEE
Q 001665 295 AA-QRDVLFGLEVVEQACAVAT-LQIGEFVPNA--LCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFIL 370 (1035)
Q Consensus 295 eA-~~EV~~a~~~l~~~~~~a~-~~~g~~~~~~--~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~ALaaGNaVVl 370 (1035)
+| .+||.-+++++.|...... +++.+..+.. ..-...++.++|+||+++|.|||||+..++.++++||.+||++|+
T Consensus 142 DAs~GEIlvTlEKI~Wtl~~Ger~L~P~~Rpn~~~~~yKg~~v~yePLGVI~aiVsWNYPfHN~lgPiiaAlFsGNaIVv 221 (583)
T KOG2454|consen 142 DASLGEILVTLEKITWTLSEGERWLKPESRPNGRAMLYKGSRVEYEPLGVIGAIVSWNYPFHNILGPIIAALFSGNAIVV 221 (583)
T ss_pred hhhHhHHHHHHHHhhhhhhcchhhcCCcCCCchhheeeccceEEEeecceEEEeeecCCchhhhhhHHHHHHhcCCeEEE
Confidence 87 5799999999998765432 3333222221 111246788999999999999999999999999999999999999
Q ss_pred eCCCCChhHHHHHHHHHH----HhCCCCCcEEEeecchhhHhhhhcCCCccEEEEeccchHHHHHHHHHHhcCCceeecC
Q 001665 371 KPSEKNPGTSMILAALAM----EAGLPDGVLNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNR 446 (1035)
Q Consensus 371 KPS~~ap~ta~~L~ell~----eAGlP~gvv~vV~g~~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~l~Pv~lEl 446 (1035)
|-||.+.+++...+++++ ..|.|+++||++++-++.+++|.+|++|++|.|.||..+|+.|++.||+.++||++||
T Consensus 222 K~SE~~~WS~~fy~e~ir~~L~a~g~~p~LVq~itclpd~a~~ltSh~g~khitFiGSqpvak~i~~~AAk~LTPv~lEL 301 (583)
T KOG2454|consen 222 KVSEHASWSGCFYFEIIRAALAAVGAPPNLVQVITCLPDTAEALTSHSGVKHITFIGSQPVAKMIMRNAAKTLTPVTLEL 301 (583)
T ss_pred EeecceeeehhhHHHHHHHHHHHcCCCcchhheeecCcchHhHhhcCCCcceEEEecCcHHHHHHHHhhhhhcCcEEEee
Confidence 999999999987777744 4599999999999989999999999999999999999999999999999999999999
Q ss_pred CCcceEEEcCCCCHHHHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHhcccccCCCCCCCcCCCcCHHH
Q 001665 447 GGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDASADVGPVVSVEV 525 (1035)
Q Consensus 447 GGknp~IV~~dADld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d~~~~~Gpli~~~~ 525 (1035)
|||+++||++|||++..+.-+++|.|..+||.|++.+|++|++++| .|+..|-.+++.++.|.+...+.|||.|++..+
T Consensus 302 GGKDafIi~dda~l~~v~si~mRGtfQSsGQNCiGiER~iv~k~~Yd~~i~~l~~rv~s~r~G~~~~~~vDMGAm~s~nr 381 (583)
T KOG2454|consen 302 GGKDAFIICDDADLSHVASIAMRGTFQSSGQNCIGIERFIVHKDIYDAFIGQLTKRVKSVRAGPPLTGRVDMGAMCSQNR 381 (583)
T ss_pred cCcccEEEeccccHHHHHHHHHhhhhhhcCCcccceeEEEEecchHHHHHHHHHHHHHHHHcCCCccCccchhhhhhccc
Confidence 9999999999999999999999999999999999999999999999 899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHCCCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecCCHHHHHHHHHhcCC
Q 001665 526 KDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRF 605 (1035)
Q Consensus 526 ~~rl~~~i~~av~~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI~laN~~~~ 605 (1035)
++.++.++++|+++||+++.||.+.-+|.+..|.|++||+|.+++++|+|++||.||||++|+.+++.|++|+++|+++|
T Consensus 382 fdhLesLv~DAv~KGArl~~gGsrF~Hpkyp~g~YF~PTlLvdvt~eMKIaqeE~FgPI~~im~ak~~eh~i~lAN~s~f 461 (583)
T KOG2454|consen 382 FDHLESLVNDAVDKGARLAVGGSRFGHPKYPVGQYFPPTLLVDVTHEMKIAQEEAFGPIMPIMQAKTDEHVIKLANDSRF 461 (583)
T ss_pred hHHHHHHHHHHHhhcchhhhcccccCCCCCCcccccCCeEEEecCchhhhHhhhccccchhhhhcCChHHHHhhccCCcc
Confidence 99999999999999999999999998999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEEcCCHHHHHHHHhccceeEEEEcCCc-----CCCCCCCCCCCCCCcCcHHHHHhcceeeEEEEecCCCCcCCCC
Q 001665 606 VNGASIFTSSGLAARKFQNEIEARLVGINVPV-----PSSFSSINESGEFNFCGKSGVQFYTQIKTVAQQWNDLPKLGMP 680 (1035)
Q Consensus 606 GLsasVfS~d~~~a~~~a~~l~sG~V~IN~~~-----~~PfGG~g~SG~G~~~G~~g~~~ft~~k~v~~~~~~~~~~~~~ 680 (1035)
||+++||+.|..+.++++..++.|.|.||+.. .+||||++.||+|+++|.+|++..|+.|+|....... ..
T Consensus 462 gLG~sVFg~dk~~c~y~a~~lqtG~vAiNDFasfY~cQlPFGG~k~SGyGrFaG~EGLrg~Cn~Ksv~yd~~~~----~~ 537 (583)
T KOG2454|consen 462 GLGCSVFGGDKHRCKYIASQLQTGVVAINDFASFYMCQLPFGGVKDSGYGRFAGIEGLRGCCNVKSVAYDRVAE----NA 537 (583)
T ss_pred cccceeccccHHHHHHHHhhhhccceeehhhhhhheeccccCCccCCCccccccHHHHHHHhcccceeccchhh----hh
Confidence 99999999999999999999999999999973 2999999999999999999999999999997653221 22
Q ss_pred cccCCCCCCcccc
Q 001665 681 LTMPLSSETDMRS 693 (1035)
Q Consensus 681 ~~~p~~~~~~~~e 693 (1035)
+-+|.+-++|...
T Consensus 538 t~ip~aldypi~~ 550 (583)
T KOG2454|consen 538 TEIPEALDYPIYG 550 (583)
T ss_pred ccCCccccccCcC
Confidence 4445555555544
|
|
| >PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-76 Score=749.12 Aligned_cols=448 Identities=23% Similarity=0.339 Sum_probs=412.9
Q ss_pred ccceEEcCEEecCCCCCeEEeecCCC-CCeEEEecCCCHHHHHHHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHHhHH
Q 001665 201 RVSNFIGGKFVDLRGSATIDVINPAT-QEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDID 279 (1035)
Q Consensus 201 ~~~~~I~G~~~~~~~~~~~~v~nP~t-Gevi~~v~~~s~~dv~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e 279 (1035)
....+|+|+.. .+..++++||+| ++++++++.++.++|++||+.|++||+.|+.++.++|+++|++++++|+++.+
T Consensus 646 ~~~p~~~~~~~---~~~~~~v~nPa~~~~~vg~v~~a~~~dv~~Av~aA~~A~~~W~~~p~~eRa~iL~r~Adlle~~~~ 722 (1318)
T PRK11809 646 QAAPMLEDPVA---AGEMSPVINPADPRDIVGYVREATPAEVEQALESAVNAAPIWFATPPAERAAILERAADLMEAQMQ 722 (1318)
T ss_pred ccCCcccCcCC---CCCEEEeECCCCCCeeEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHH
Confidence 33456777432 356799999998 79999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCccccCCCCCCcceeeeccceeEEEECCCCcchhchHHHHH
Q 001665 280 KLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFS 359 (1035)
Q Consensus 280 ~La~~i~~etGk~~~eA~~EV~~a~~~l~~~~~~a~~~~g~~~~~~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~ 359 (1035)
+|+.+++.|+||++.++..||..++++++||+..+.... ....++|+|||++|+|||||+.+++++++
T Consensus 723 eL~~l~~~EaGKt~~~A~~EV~eaidflryyA~~a~~~~------------~~~~~~PlGVV~~IsPWNFPlai~~g~ia 790 (1318)
T PRK11809 723 TLMGLLVREAGKTFSNAIAEVREAVDFLRYYAGQVRDDF------------DNDTHRPLGPVVCISPWNFPLAIFTGQVA 790 (1318)
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhc------------CCceeecccEEEEECCCccHHHHHHHHHH
Confidence 999999999999999999999999999999987664321 12468999999999999999999999999
Q ss_pred HHHhcCCEEEEeCCCCChhHHHHHHHHHHHhCCCCCcEEEeecch-hhHhhhhcCCCccEEEEeccchHHHHHHHHHHhc
Q 001665 360 IAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGTN-DVINHICDDEDIKAISFVASSTASVQMYARAAAR 438 (1035)
Q Consensus 360 ~ALaaGNaVVlKPS~~ap~ta~~L~ell~eAGlP~gvv~vV~g~~-e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~ 438 (1035)
+||++||+||+|||+.+|+++..++++|.++|+|+|+||+|+|++ +++..|+.|++|++|+||||+++|+.|.+.++++
T Consensus 791 aALaAGN~VV~KPseqTpl~a~~lv~ll~eAGlP~gvlqlv~G~g~~vg~~Lv~~p~V~~V~FTGSt~tg~~I~~~aA~~ 870 (1318)
T PRK11809 791 AALAAGNSVLAKPAEQTPLIAAQAVRILLEAGVPAGVVQLLPGRGETVGAALVADARVRGVMFTGSTEVARLLQRNLAGR 870 (1318)
T ss_pred HHHHcCCeEEEeCCCCcHHHHHHHHHHHHHhCcCcCeEEEeeCCcHHHHHHHhcCCCcCEEEEeCCHHHHHHHHHHHhhh
Confidence 999999999999999999999999999999999999999999955 5789999999999999999999999999999887
Q ss_pred C------CceeecCCCcceEEEcCCCCHHHHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHhcccccCC
Q 001665 439 G------KRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGT 511 (1035)
Q Consensus 439 l------~Pv~lElGGknp~IV~~dADld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~ 511 (1035)
+ +|+++|+||||++||++|||+|.|++.|++|+|.++||.|++.++++|+++++ +|++.|++.++++++|+|.
T Consensus 871 l~~~g~~~pliaElGGkNa~IVdsdAdle~Av~~iv~sAF~~aGQrCsA~~rl~V~e~Iad~fl~~L~~a~~~l~vGdP~ 950 (1318)
T PRK11809 871 LDPQGRPIPLIAETGGQNAMIVDSSALTEQVVADVLASAFDSAGQRCSALRVLCLQDDVADRTLKMLRGAMAECRMGNPD 950 (1318)
T ss_pred cccccCceeEEEecCCccceEECCCCCHHHHHHHHHHHHHhcCCCccccCcEEEEcHHHHHHHHHHHHHHHHhcCCCCcc
Confidence 6 79999999999999999999999999999999999999999999999999998 8999999999999999999
Q ss_pred CCCCCcCCCcCHHHHHHHHHHHHHHHHCCCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecC
Q 001665 512 DASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQAD 591 (1035)
Q Consensus 512 d~~~~~Gpli~~~~~~rl~~~i~~av~~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~ 591 (1035)
+.++++||+|++.+++++.++|++++++|++++.+|.... .....|+|++|||+.. +++.+++||+|||||+|++|+
T Consensus 951 ~~~tdvGPvId~~a~~~i~~~I~~a~~~G~~v~~g~~~~~-~~~~~G~fv~PTIi~~--~~~~~l~eEiFGPVL~V~~~~ 1027 (1318)
T PRK11809 951 RLSTDIGPVIDAEAKANIERHIQAMRAKGRPVFQAARENS-EDWQSGTFVPPTLIEL--DSFDELKREVFGPVLHVVRYN 1027 (1318)
T ss_pred cccCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCCCCC-CCCCCCeEEeeEEEec--cchhhhcCcccCceEEEEEeC
Confidence 9999999999999999999999999999999998775311 1114699999999974 567889999999999999996
Q ss_pred --CHHHHHHHHHhcCCCcEEEEEcCCHHHHHHHHhccceeEEEEcCCcC------CCCCCCCCCCCC-CcCcHHHHHhcc
Q 001665 592 --SLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPVP------SSFSSINESGEF-NFCGKSGVQFYT 662 (1035)
Q Consensus 592 --d~eeAI~laN~~~~GLsasVfS~d~~~a~~~a~~l~sG~V~IN~~~~------~PfGG~g~SG~G-~~~G~~g~~~ft 662 (1035)
+++|||+++|+++|||+++|||+|.+.++++++++++|.|+||.... .||||+|.||.| ..||.+++..|+
T Consensus 1028 ~~~ldeaI~~iN~t~yGLt~gV~Srd~~~~~~v~~~l~aGnvyINr~~~gavvg~qPFGG~g~SG~G~kaGGp~yL~~f~ 1107 (1318)
T PRK11809 1028 RNQLDELIEQINASGYGLTLGVHTRIDETIAQVTGSAHVGNLYVNRNMVGAVVGVQPFGGEGLSGTGPKAGGPLYLYRLL 1107 (1318)
T ss_pred CCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHhCCEeEEEECCCCcCCCcCCCCCCCcCcCCCCCCCCCHHHHHHHh
Confidence 79999999999999999999999999999999999999999997531 699999999999 479999999999
Q ss_pred eeeE
Q 001665 663 QIKT 666 (1035)
Q Consensus 663 ~~k~ 666 (1035)
..+.
T Consensus 1108 ~~~~ 1111 (1318)
T PRK11809 1108 ATRP 1111 (1318)
T ss_pred ccCC
Confidence 8874
|
|
| >cd07134 ALDH_AlkH-like Pseudomonas putida Aldehyde dehydrogenase AlkH-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-76 Score=688.86 Aligned_cols=419 Identities=24% Similarity=0.320 Sum_probs=389.3
Q ss_pred HHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHhhcC-c
Q 001665 243 DAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQ-RDVLFGLEVVEQACAVATLQIG-E 320 (1035)
Q Consensus 243 ~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e~La~~i~~etGk~~~eA~-~EV~~a~~~l~~~~~~a~~~~g-~ 320 (1035)
+++++|++||+.|+.++..+|.++|++++++|+++.++|++++++|+||++.+++ .|+..++..+++++.......+ .
T Consensus 2 ~~~~~a~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~~~~~~~ 81 (433)
T cd07134 2 RVFAAQQAHALALRASTAAERIAKLKRLKKAILARREEIIAALAADFRKPAAEVDLTEILPVLSEINHAIKHLKKWMKPK 81 (433)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 5789999999999999999999999999999999999999999999999999997 6999999999988876543222 1
Q ss_pred ccc--CCCCCCcceeeeccceeEEEECCCCcchhchHHHHHHHHhcCCEEEEeCCCCChhHHHHHHHHHHHhCCCCCcEE
Q 001665 321 FVP--NALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLN 398 (1035)
Q Consensus 321 ~~~--~~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~ALaaGNaVVlKPS~~ap~ta~~L~ell~eAGlP~gvv~ 398 (1035)
... ....+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++.++++++.++ +|+|+|+
T Consensus 82 ~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~~~~~~~a-~p~g~v~ 160 (433)
T cd07134 82 RVRTPLLLFGTKSKIRYEPKGVCLIISPWNYPFNLAFGPLVSAIAAGNTAILKPSELTPHTSAVIAKIIREA-FDEDEVA 160 (433)
T ss_pred ccCCccccCCCceEEEEecCCEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHh-CCcCEEE
Confidence 111 1123445688999999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred EeecchhhHhhhhcCCCccEEEEeccchHHHHHHHHHHhcCCceeecCCCcceEEEcCCCCHHHHHHHHHHHHhccCCCC
Q 001665 399 IVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGER 478 (1035)
Q Consensus 399 vV~g~~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~l~Pv~lElGGknp~IV~~dADld~Aa~~Iv~s~f~naGQ~ 478 (1035)
+++|+.+.+..|+.|+ ++.|.||||+.+|+.|++.++++++|+++|+|||||+||++|||++.|++.+++++|+++||.
T Consensus 161 ~v~g~~~~~~~l~~~~-v~~v~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~~~iV~~dAD~~~aa~~i~~~~~~~~GQ~ 239 (433)
T cd07134 161 VFEGDAEVAQALLELP-FDHIFFTGSPAVGKIVMAAAAKHLASVTLELGGKSPTIVDETADLKKAAKKIAWGKFLNAGQT 239 (433)
T ss_pred EEeCChhHHHHHHhCC-CCEEEEECChHHHHHHHHHHHhcCCcEEEEccCCCcEEECCCCCHHHHHHHHHHHhhcCcCCc
Confidence 9999888889999987 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCceEEEeCccH-HHHHHHHHHHHhcccccC-CCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCcEeeCCcccccCCCC
Q 001665 479 CTALSTAVFVGSSV-QWEDELVELAKALKVNVG-TDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYE 556 (1035)
Q Consensus 479 C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p-~d~~~~~Gpli~~~~~~rl~~~i~~av~~GAkvl~gG~~~~~p~~~ 556 (1035)
|+++++|||+++++ +|+++|+++++.++.|++ .+.++++||++++.+++++.++|++++++|+++++||.. ..
T Consensus 240 C~a~~rv~V~~~v~d~f~~~L~~~~~~~~~~~~~~~~~~~~gpli~~~~~~~i~~~i~~a~~~ga~~~~gg~~-----~~ 314 (433)
T cd07134 240 CIAPDYVFVHESVKDAFVEHLKAEIEKFYGKDAARKASPDLARIVNDRHFDRLKGLLDDAVAKGAKVEFGGQF-----DA 314 (433)
T ss_pred ccCCcEEEECHHHHHHHHHHHHHHHHHHcCCCCCcCCCCccCCcCCHHHHHHHHHHHHHHHhCCCEEEeCCCc-----CC
Confidence 99999999999998 899999999999888886 788899999999999999999999999999999999863 23
Q ss_pred CCceeeceEEecCCCCCccccccccCcceeEEecCCHHHHHHHHHhcCCCcEEEEEcCCHHHHHHHHhccceeEEEEcCC
Q 001665 557 NGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVP 636 (1035)
Q Consensus 557 ~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI~laN~~~~GLsasVfS~d~~~a~~~a~~l~sG~V~IN~~ 636 (1035)
.|+|++|||+.++++++.+++||+||||++|++|+|++|||+++|+.+|||+++|||+|.+.+++++.++++|.|+||+.
T Consensus 315 ~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~ 394 (433)
T cd07134 315 AQRYIAPTVLTNVTPDMKIMQEEIFGPVLPIITYEDLDEVIEYINAKPKPLALYVFSKDKANVNKVLARTSSGGVVVNDV 394 (433)
T ss_pred CCCEEeeEEEeCCCCccHHHhccccCceEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcceEEECCc
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999975
Q ss_pred c-----C-CCCCCCCCCCCCCcCcHHHHHhcceeeEEE
Q 001665 637 V-----P-SSFSSINESGEFNFCGKSGVQFYTQIKTVA 668 (1035)
Q Consensus 637 ~-----~-~PfGG~g~SG~G~~~G~~g~~~ft~~k~v~ 668 (1035)
. + +||||+|.||+|+++|.+++++||+.|++.
T Consensus 395 ~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~i~ 432 (433)
T cd07134 395 VLHFLNPNLPFGGVNNSGIGSYHGVYGFKAFSHERAVL 432 (433)
T ss_pred ccccCCCCCCCCCcCcccCCCcCcHHHHHHhcccceee
Confidence 2 2 799999999999999999999999999874
|
Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD. |
| >cd07132 ALDH_F3AB Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-76 Score=690.01 Aligned_cols=416 Identities=21% Similarity=0.307 Sum_probs=382.5
Q ss_pred HHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHhhcCcc
Q 001665 243 DAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQ-RDVLFGLEVVEQACAVATLQIGEF 321 (1035)
Q Consensus 243 ~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e~La~~i~~etGk~~~eA~-~EV~~a~~~l~~~~~~a~~~~g~~ 321 (1035)
+|+++|++||+.|+.++..+|.++|++++++|+++.++|++++++|+||++.++. .|+..+++.++++++.+....+..
T Consensus 2 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~ 81 (443)
T cd07132 2 EAVRRAREAFSSGKTRPLEFRIQQLEALLRMLEENEDEIVEALAKDLRKPKFEAVLSEILLVKNEIKYAISNLPEWMKPE 81 (443)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 5889999999999999999999999999999999999999999999999999996 599999999999887665433221
Q ss_pred ccC---CCCCCcceeeeccceeEEEECCCCcchhchHHHHHHHHhcCCEEEEeCCCCChhHHHHHHHHHHHhCCCCCcEE
Q 001665 322 VPN---ALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLN 398 (1035)
Q Consensus 322 ~~~---~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~ALaaGNaVVlKPS~~ap~ta~~L~ell~eAGlP~gvv~ 398 (1035)
... ...+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.++ +|+|++|
T Consensus 82 ~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~~~~-lp~gv~~ 160 (443)
T cd07132 82 PVKKNLATLLDDVYIYKEPLGVVLIIGAWNYPLQLTLVPLVGAIAAGNCVVIKPSEVSPATAKLLAELIPKY-LDKECYP 160 (443)
T ss_pred cCCCccccCCCceEEEEecccEEEEEcCCchhHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHh-CCcCeEE
Confidence 111 112235688899999999999999999999999999999999999999999999999999999985 9999999
Q ss_pred EeecchhhHhhhhcCCCccEEEEeccchHHHHHHHHHHhcCCceeecCCCcceEEEcCCCCHHHHHHHHHHHHhccCCCC
Q 001665 399 IVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGER 478 (1035)
Q Consensus 399 vV~g~~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~l~Pv~lElGGknp~IV~~dADld~Aa~~Iv~s~f~naGQ~ 478 (1035)
+|+|+.+.+..|+. ++||.|+||||+.+|+.|++.++++++|+++|+|||||+||++|||++.|++.|++++|+++||.
T Consensus 161 vv~g~~~~~~~l~~-~~vd~V~fTGs~~~g~~i~~~a~~~~~~~~lElgG~~p~iV~~dADl~~aa~~i~~~~f~~~GQ~ 239 (443)
T cd07132 161 VVLGGVEETTELLK-QRFDYIFYTGSTSVGKIVMQAAAKHLTPVTLELGGKSPCYVDKSCDIDVAARRIAWGKFINAGQT 239 (443)
T ss_pred EEeCCHHHHHHHHh-CCCCEEEEECChHHHHHHHHHHHhhCCceEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCc
Confidence 99997777778886 58999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCceEEEeCccH-HHHHHHHHHHHhcccccCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCcEeeCCcccccCCCCC
Q 001665 479 CTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYEN 557 (1035)
Q Consensus 479 C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d~~~~~Gpli~~~~~~rl~~~i~~av~~GAkvl~gG~~~~~p~~~~ 557 (1035)
|+++++|||+++++ +|+++|++.+++++.|++ ++++++||++++++++++.+++++ +++++||.. +..
T Consensus 240 C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~v~~~i~~-----a~~~~gg~~-----~~~ 308 (443)
T cd07132 240 CIAPDYVLCTPEVQEKFVEALKKTLKEFYGEDP-KESPDYGRIINDRHFQRLKKLLSG-----GKVAIGGQT-----DEK 308 (443)
T ss_pred eeCCcEEEEcHHHHHHHHHHHHHHHHHhcCCCC-CcccccCCcCCHHHHHHHHHHHhC-----CEEEeCCcc-----CCC
Confidence 99999999999998 899999999999988887 678899999999999999999873 589998863 235
Q ss_pred CceeeceEEecCCCCCccccccccCcceeEEecCCHHHHHHHHHhcCCCcEEEEEcCCHHHHHHHHhccceeEEEEcCCc
Q 001665 558 GNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPV 637 (1035)
Q Consensus 558 g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI~laN~~~~GLsasVfS~d~~~a~~~a~~l~sG~V~IN~~~ 637 (1035)
|.|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.+.++++++++|.|+||+..
T Consensus 309 ~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~an~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~IN~~~ 388 (443)
T cd07132 309 ERYIAPTVLTDVKPSDPVMQEEIFGPILPIVTVNNLDEAIEFINSREKPLALYVFSNNKKVINKILSNTSSGGVCVNDTI 388 (443)
T ss_pred CCEEeeEEEeCCCCCChHHhccccCceeEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcceEEECCcc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999752
Q ss_pred -----C-CCCCCCCCCCCCCcCcHHHHHhcceeeEEEEec
Q 001665 638 -----P-SSFSSINESGEFNFCGKSGVQFYTQIKTVAQQW 671 (1035)
Q Consensus 638 -----~-~PfGG~g~SG~G~~~G~~g~~~ft~~k~v~~~~ 671 (1035)
. +||||+|.||+|+++|.+|+++|++.|++...+
T Consensus 389 ~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~v~~~~ 428 (443)
T cd07132 389 MHYTLDSLPFGGVGNSGMGAYHGKYSFDTFSHKRSCLVKS 428 (443)
T ss_pred cccCCCCCCCCCCCcccCCCcccHHHHHHhccccEEEEcc
Confidence 2 899999999999999999999999999998764
|
NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes. |
| >PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-75 Score=742.79 Aligned_cols=450 Identities=24% Similarity=0.332 Sum_probs=416.5
Q ss_pred ccceEEcCEEecCCCCCeEEeecCCC-CCeEEEecCCCHHHHHHHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHHhHH
Q 001665 201 RVSNFIGGKFVDLRGSATIDVINPAT-QEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDID 279 (1035)
Q Consensus 201 ~~~~~I~G~~~~~~~~~~~~v~nP~t-Gevi~~v~~~s~~dv~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e 279 (1035)
..+.+|+|+... +..++++||+| ++++++++.++.+++++||+.|++||+.|+.++.++|+++|++++++|+++++
T Consensus 554 ~~~~~i~g~~~~---~~~~~v~nP~~~~~~vg~v~~a~~~~v~~Av~aA~~A~~~W~~~~~~~Ra~iL~raAdll~~~~~ 630 (1208)
T PRK11905 554 HAAPLLAGGDVD---GGTRPVLNPADHDDVVGTVTEASAEDVERALAAAQAAFPEWSATPAAERAAILERAADLMEAHMP 630 (1208)
T ss_pred eecceecccccc---CCeeeEECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHH
Confidence 445677776542 45699999999 99999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCccccCCCCCCcceeeeccceeEEEECCCCcchhchHHHHH
Q 001665 280 KLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFS 359 (1035)
Q Consensus 280 ~La~~i~~etGk~~~eA~~EV~~a~~~l~~~~~~a~~~~g~~~~~~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~ 359 (1035)
+|+.+++.|+||++.++..||..+++.+++++..+....+ ...++|+|||++|+|||||+.+++++++
T Consensus 631 eL~~l~~~E~GKt~~ea~~Ev~eaid~lr~ya~~a~~~~~------------~~~~~P~GVv~~IsPwNfPlai~~g~i~ 698 (1208)
T PRK11905 631 ELFALAVREAGKTLANAIAEVREAVDFLRYYAAQARRLLN------------GPGHKPLGPVVCISPWNFPLAIFTGQIA 698 (1208)
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcC------------CceecCccEEEEEcCCcCHHHHHHHHHH
Confidence 9999999999999999999999999999999887654321 1357899999999999999999999999
Q ss_pred HHHhcCCEEEEeCCCCChhHHHHHHHHHHHhCCCCCcEEEeecch-hhHhhhhcCCCccEEEEeccchHHHHHHHHHHhc
Q 001665 360 IAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGTN-DVINHICDDEDIKAISFVASSTASVQMYARAAAR 438 (1035)
Q Consensus 360 ~ALaaGNaVVlKPS~~ap~ta~~L~ell~eAGlP~gvv~vV~g~~-e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~ 438 (1035)
+||++||+||+|||+.+|+++..++++|.++|+|+|+||+|+|++ +.+..|+.|++|++|+||||+.+|+.|.+.++++
T Consensus 699 aALaaGN~VV~KPse~tpl~a~~l~~ll~eAGlP~gvl~lV~G~g~~vg~~Lv~~p~v~~V~FTGSt~vg~~I~~~~A~~ 778 (1208)
T PRK11905 699 AALVAGNTVLAKPAEQTPLIAARAVRLLHEAGVPKDALQLLPGDGRTVGAALVADPRIAGVMFTGSTEVARLIQRTLAKR 778 (1208)
T ss_pred HHHHcCCEEEEeCCcccHHHHHHHHHHHHHcCCCcccEEEeeCCchHHHHHHHcCCCcCEEEEeCCHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999965 5889999999999999999999999999999876
Q ss_pred ---CCceeecCCCcceEEEcCCCCHHHHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHhcccccCCCCC
Q 001665 439 ---GKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDAS 514 (1035)
Q Consensus 439 ---l~Pv~lElGGknp~IV~~dADld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d~~ 514 (1035)
.+|+++|+|||||+||++|||++.|++.+++|+|.++||.|+++++|||+++++ +|+++|+++++++++|+|.+.+
T Consensus 779 ~~~~~pli~ElGGkN~~IV~~dAdle~Av~~iv~saF~~aGQ~CsA~~rl~V~~si~d~f~e~L~~~~~~l~vGdP~d~~ 858 (1208)
T PRK11905 779 SGPPVPLIAETGGQNAMIVDSSALPEQVVADVIASAFDSAGQRCSALRVLCLQEDVADRVLTMLKGAMDELRIGDPWRLS 858 (1208)
T ss_pred cCCCCeEEEecCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCccccCcEEEEehhHHHHHHHHHHHHHHHhcCCCchhcc
Confidence 489999999999999999999999999999999999999999999999999998 8999999999999999999999
Q ss_pred CCcCCCcCHHHHHHHHHHHHHHHHCCCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecC--C
Q 001665 515 ADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQAD--S 592 (1035)
Q Consensus 515 ~~~Gpli~~~~~~rl~~~i~~av~~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~--d 592 (1035)
+++||+|++.+++++.++|++++++|+.++.++... ....|+|+.|||+. + +++.+++||+|||||+|++|+ +
T Consensus 859 t~~GPvId~~a~~~i~~~I~~a~~~G~~l~~g~~~~---~~~~G~fv~PTVl~-~-~~~~~~~eEiFGPVL~V~~y~~~d 933 (1208)
T PRK11905 859 TDVGPVIDAEAQANIEAHIEAMRAAGRLVHQLPLPA---ETEKGTFVAPTLIE-I-DSISDLEREVFGPVLHVVRFKADE 933 (1208)
T ss_pred CCccCccCHHHHHHHHHHHHHHHHCCCEEEEccCCC---CCCCCeEEeeEEEe-c-CChHHhcCCccCceEEEEEeCCCC
Confidence 999999999999999999999999999888766321 12469999999997 3 578899999999999999997 7
Q ss_pred HHHHHHHHHhcCCCcEEEEEcCCHHHHHHHHhccceeEEEEcCCcC------CCCCCCCCCCCCC-cCcHHHHHhcceee
Q 001665 593 LEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPVP------SSFSSINESGEFN-FCGKSGVQFYTQIK 665 (1035)
Q Consensus 593 ~eeAI~laN~~~~GLsasVfS~d~~~a~~~a~~l~sG~V~IN~~~~------~PfGG~g~SG~G~-~~G~~g~~~ft~~k 665 (1035)
++|||+++|+++|||+++|||+|.+.+++++.++++|.|+||+... .||||+|.||.|. .||.++++.|+..|
T Consensus 934 ldeaI~~iN~t~yGLt~~I~S~d~~~~~~~~~~l~aGnvyIN~~~~ga~vg~qPFGG~~~SG~G~kaGGp~~L~~f~~~k 1013 (1208)
T PRK11905 934 LDRVIDDINATGYGLTFGLHSRIDETIAHVTSRIRAGNIYVNRNIIGAVVGVQPFGGEGLSGTGPKAGGPLYLGRLVREA 1013 (1208)
T ss_pred HHHHHHHHhcCCCCceEEEEcCCHHHHHHHHHhCCEeEEEECCCCCCCccCCCCCCCCCCCCCCCcCCCHHHHHHHhhcc
Confidence 9999999999999999999999999999999999999999997531 6999999999994 89999999999999
Q ss_pred EEEEe
Q 001665 666 TVAQQ 670 (1035)
Q Consensus 666 ~v~~~ 670 (1035)
++...
T Consensus 1014 ~v~~~ 1018 (1208)
T PRK11905 1014 PTPIP 1018 (1208)
T ss_pred eeecc
Confidence 88753
|
|
| >cd07087 ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-74 Score=670.42 Aligned_cols=413 Identities=24% Similarity=0.357 Sum_probs=379.3
Q ss_pred HHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHhhcCcc
Q 001665 243 DAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQ-RDVLFGLEVVEQACAVATLQIGEF 321 (1035)
Q Consensus 243 ~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e~La~~i~~etGk~~~eA~-~EV~~a~~~l~~~~~~a~~~~g~~ 321 (1035)
+++++|++||+.|+.++..+|.++|++++++|++++++|+++++.|+||++.++. .|+..+++.+++++..+....+..
T Consensus 2 ~~v~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~~~~~Ev~~~~~~~~~~~~~~~~~~~~~ 81 (426)
T cd07087 2 ELVARLRETFLTGKTRSLEWRKAQLKALKRMLTENEEEIAAALYADLGKPPAEAYLTEIAVVLGEIDHALKHLKKWMKPR 81 (426)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 4899999999999999999999999999999999999999999999999987775 599999999999887655432211
Q ss_pred -c--cCCCCCCcceeeeccceeEEEECCCCcchhchHHHHHHHHhcCCEEEEeCCCCChhHHHHHHHHHHHhCCCCCcEE
Q 001665 322 -V--PNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLN 398 (1035)
Q Consensus 322 -~--~~~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~ALaaGNaVVlKPS~~ap~ta~~L~ell~eAGlP~gvv~ 398 (1035)
. .....+...+.+++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.++.+|+++|.+ |+|+|+++
T Consensus 82 ~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlKps~~~p~~~~~l~~~~~~-~~P~gv~~ 160 (426)
T cd07087 82 RVSVPLLLQPAKAYVIPEPLGVVLIIGPWNYPLQLALAPLIGAIAAGNTVVLKPSELAPATSALLAKLIPK-YFDPEAVA 160 (426)
T ss_pred ccCCccccCCCceEEEEecCcEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHH-hCCCCEEE
Confidence 1 1111233567889999999999999999999999999999999999999999999999999999999 69999999
Q ss_pred EeecchhhHhhhhcCCCccEEEEeccchHHHHHHHHHHhcCCceeecCCCcceEEEcCCCCHHHHHHHHHHHHhccCCCC
Q 001665 399 IVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGER 478 (1035)
Q Consensus 399 vV~g~~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~l~Pv~lElGGknp~IV~~dADld~Aa~~Iv~s~f~naGQ~ 478 (1035)
+|+|+.+.+..|+.|+ ++.|+||||+.+|+.|++.++++++|+++|+|||||+||++|||++.|++.|++++|.++||.
T Consensus 161 vv~g~~~~~~~l~~~~-v~~V~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~ 239 (426)
T cd07087 161 VVEGGVEVATALLAEP-FDHIFFTGSPAVGKIVMEAAAKHLTPVTLELGGKSPCIVDKDANLEVAARRIAWGKFLNAGQT 239 (426)
T ss_pred EEeCCchHHHHHHhCC-CCEEEEeCChHHHHHHHHHHHhhCCceEEeccCCCceEecCCCCHHHHHHHHHHHHHhccCCc
Confidence 9999778889999998 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCceEEEeCccH-HHHHHHHHHHHhcccccCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCcEeeCCcccccCCCCC
Q 001665 479 CTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYEN 557 (1035)
Q Consensus 479 C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d~~~~~Gpli~~~~~~rl~~~i~~av~~GAkvl~gG~~~~~p~~~~ 557 (1035)
|+++++|||+++++ +|+++|++.++.++.|++ ++.+++||++++.+++++.++++++ ++++||.. ...
T Consensus 240 C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~~~~-~~~~~~gpli~~~~~~~~~~~i~~a-----~v~~gg~~-----~~~ 308 (426)
T cd07087 240 CIAPDYVLVHESIKDELIEELKKAIKEFYGEDP-KESPDYGRIINERHFDRLASLLDDG-----KVVIGGQV-----DKE 308 (426)
T ss_pred cccCCEEEEcHHHHHHHHHHHHHHHHHHcCCCC-ccCCCcCCCCCHHHHHHHHHHHhcc-----eEEeCCcc-----CCC
Confidence 99999999999998 899999999999976655 4688999999999999999999864 88888863 235
Q ss_pred CceeeceEEecCCCCCccccccccCcceeEEecCCHHHHHHHHHhcCCCcEEEEEcCCHHHHHHHHhccceeEEEEcCCc
Q 001665 558 GNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPV 637 (1035)
Q Consensus 558 g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI~laN~~~~GLsasVfS~d~~~a~~~a~~l~sG~V~IN~~~ 637 (1035)
|.|++|||+.+++++|.+++||+||||++|++|+|++|||+++|+.+|||+++|||+|.+.+.++++++++|+|+||...
T Consensus 309 g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~ 388 (426)
T cd07087 309 ERYIAPTILDDVSPDSPLMQEEIFGPILPILTYDDLDEAIEFINSRPKPLALYLFSEDKAVQERVLAETSSGGVCVNDVL 388 (426)
T ss_pred CCEEeeEEEecCCCCCHHHhcccccceEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHhcCCcccEEECCcc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999752
Q ss_pred -----C-CCCCCCCCCCCCCcCcHHHHHhcceeeEEE
Q 001665 638 -----P-SSFSSINESGEFNFCGKSGVQFYTQIKTVA 668 (1035)
Q Consensus 638 -----~-~PfGG~g~SG~G~~~G~~g~~~ft~~k~v~ 668 (1035)
. +||||+|.||+|+++|.+++++||+.|+++
T Consensus 389 ~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~~~ 425 (426)
T cd07087 389 LHAAIPNLPFGGVGNSGMGAYHGKAGFDTFSHLKSVL 425 (426)
T ss_pred cccCCCCCCCCCCCcccCCCccCHHHHHHhccceeec
Confidence 2 899999999999999999999999999874
|
ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. |
| >cd07078 ALDH NAD(P)+ dependent aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-71 Score=651.05 Aligned_cols=424 Identities=37% Similarity=0.515 Sum_probs=396.5
Q ss_pred HHHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCcc
Q 001665 242 KDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEF 321 (1035)
Q Consensus 242 ~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e~La~~i~~etGk~~~eA~~EV~~a~~~l~~~~~~a~~~~g~~ 321 (1035)
++++++|++|++.|+.++.++|.++|+++++.|.++.++|+++++.|+||+..++..|+..+++.+++++.......+..
T Consensus 1 ~~av~~a~~a~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~etG~~~~~~~~ei~~~i~~l~~~~~~~~~~~~~~ 80 (432)
T cd07078 1 DAAVAAARAAFKAWAALPPAERAAILRKLADLLEERREELAALETLETGKPIEEALGEVARAADTFRYYAGLARRLHGEV 80 (432)
T ss_pred CHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 36899999999999999999999999999999999999999999999999999999999999999999887666544433
Q ss_pred ccCCCCCCcceeeeccceeEEEECCCCcchhchHHHHHHHHhcCCEEEEeCCCCChhHHHHHHHHHHHhCCCCCcEEEee
Q 001665 322 VPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVH 401 (1035)
Q Consensus 322 ~~~~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~ALaaGNaVVlKPS~~ap~ta~~L~ell~eAGlP~gvv~vV~ 401 (1035)
......+...+.+++|+|||++|+|||||+..+++.+++||++||+||+|||+.+|.++..|+++|.++|+|++++++++
T Consensus 81 ~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~vilkps~~~~~~~~~l~~~l~~ag~p~~~~~~~~ 160 (432)
T cd07078 81 IPSPDPGELAIVRREPLGVVGAITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALLLAELLAEAGLPPGVLNVVT 160 (432)
T ss_pred ccccCCCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCCCcCcEEEEe
Confidence 22223456678899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchh-hHhhhhcCCCccEEEEeccchHHHHHHHHHHhcCCceeecCCCcceEEEcCCCCHHHHHHHHHHHHhccCCCCcc
Q 001665 402 GTND-VINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCT 480 (1035)
Q Consensus 402 g~~e-~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~l~Pv~lElGGknp~IV~~dADld~Aa~~Iv~s~f~naGQ~C~ 480 (1035)
|+.+ .+..|+.|++++.|+||||..+|+.|.+.++++++|+++|+||++++||++|+|++.|++.|++++|+++||.|+
T Consensus 161 ~~~~~~~~~l~~~~~i~~v~ftGs~~~~~~v~~~a~~~~~~~~~e~gg~~~~iV~~~ad~~~aa~~i~~~~~~~~Gq~C~ 240 (432)
T cd07078 161 GDGDEVGAALASHPRVDKISFTGSTAVGKAIMRAAAENLKRVTLELGGKSPLIVFDDADLDAAVKGAVFGAFGNAGQVCT 240 (432)
T ss_pred cCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhccCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCcc
Confidence 8654 788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceEEEeCccH-HHHHHHHHHHHhcccccCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCcEeeCCcccccCCCCCCc
Q 001665 481 ALSTAVFVGSSV-QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGN 559 (1035)
Q Consensus 481 a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d~~~~~Gpli~~~~~~rl~~~i~~av~~GAkvl~gG~~~~~p~~~~g~ 559 (1035)
++++|+|+++++ +|+++|+++++++++|+|.++++++||++++.+++++.++|++++++|+++++||..... ..|.
T Consensus 241 a~~~i~v~~~~~~~~~~~L~~~l~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~gg~~~~~---~~g~ 317 (432)
T cd07078 241 AASRLLVHESIYDEFVERLVERVKALKVGNPLDPDTDMGPLISAAQLDRVLAYIEDAKAEGAKLLCGGKRLEG---GKGY 317 (432)
T ss_pred CCceEEEcHHHHHHHHHHHHHHHHccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCC---CCCc
Confidence 999999999987 899999999999999999999999999999999999999999999999999998864211 1589
Q ss_pred eeeceEEecCCCCCccccccccCcceeEEecCCHHHHHHHHHhcCCCcEEEEEcCCHHHHHHHHhccceeEEEEcCCcC-
Q 001665 560 FVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPVP- 638 (1035)
Q Consensus 560 fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI~laN~~~~GLsasVfS~d~~~a~~~a~~l~sG~V~IN~~~~- 638 (1035)
|++|||+.++++++.+++||+||||++|++|++++|||+++|+.++||+++|||+|.+.+++++.++++|.|+||+...
T Consensus 318 ~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~~l~~~i~t~d~~~~~~~~~~~~~g~v~iN~~~~~ 397 (432)
T cd07078 318 FVPPTVLTDVDPDMPIAQEEIFGPVLPVIPFKDEEEAIELANDTEYGLAAGVFTRDLERALRVAERLEAGTVWINDYSVG 397 (432)
T ss_pred EEccEEEecCCCCChhhhCCCcCceEEEEEeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhcCcceEEECCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999998632
Q ss_pred ----CCCCCCCCCCCCCcCcHHHHHhcceeeEEE
Q 001665 639 ----SSFSSINESGEFNFCGKSGVQFYTQIKTVA 668 (1035)
Q Consensus 639 ----~PfGG~g~SG~G~~~G~~g~~~ft~~k~v~ 668 (1035)
+||||+|.||+|+++|.+|+++|++.|++.
T Consensus 398 ~~~~~pfgG~~~sg~g~~~g~~~~~~~~~~k~v~ 431 (432)
T cd07078 398 AEPSAPFGGVKQSGIGREGGPYGLEEYTEPKTVT 431 (432)
T ss_pred CCCCCCcCCcCcCcCCccchHHHHHHhhceEEEE
Confidence 899999999999999999999999999874
|
The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer |
| >TIGR02288 PaaN_2 phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-71 Score=661.05 Aligned_cols=436 Identities=19% Similarity=0.228 Sum_probs=376.3
Q ss_pred ecCCCCCeEEEecCCCHHHHHHHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHH---
Q 001665 222 INPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQR--- 298 (1035)
Q Consensus 222 ~nP~tGevi~~v~~~s~~dv~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e~La~~i~~etGk~~~eA~~--- 298 (1035)
+||+||+++++++.++. +++|++|++||+.|+.++..+|.++|++++++|+++.++|+++++.|+||++.++..
T Consensus 70 ~~P~t~~~~~~~~~~~~---~~av~aA~~A~~~W~~~~~~~R~~vL~~~a~~l~~~~~elA~~~~~etGk~~~~a~e~gk 146 (551)
T TIGR02288 70 RSPYGVELGVTYPQCDG---DALLDAAHAALPGWRDAGARARAGVCLEILQRLNARSFEIAHAVMHTTGQAFMMAFQAGG 146 (551)
T ss_pred cCCCCCCEEEEEcCCCH---HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHHHHhccC
Confidence 58999999999999985 899999999999999999999999999999999999999999999999999988853
Q ss_pred --HHHHHHHHHHHHHHHHHhhcCccc---cCCCC---CCcceeeeccceeEEEECCCCcchhchHHHHHHHHhcCCEEEE
Q 001665 299 --DVLFGLEVVEQACAVATLQIGEFV---PNALC---GLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFIL 370 (1035)
Q Consensus 299 --EV~~a~~~l~~~~~~a~~~~g~~~---~~~~~---g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~ALaaGNaVVl 370 (1035)
++.++++.++++++......+... +.... ....+..++|+|||++|+|||||+++.++++++||++||+||+
T Consensus 147 p~~~~r~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vI~PwNfP~~~~~~~l~~ALaaGN~VVl 226 (551)
T TIGR02288 147 PHAQDRGLEAVAYAYREMSRIPETAVWEKPQGKNDPLKLKKRFTIVPRGIALVIGCSTFPTWNTYPGLFASLATGNPVLV 226 (551)
T ss_pred hHHHHHHHHHHHHHHHHHHhccCcccccccCCCCCcccccceEEEEecCeEEEEcCcccHHHHHHHHHHHHHHcCCeEEE
Confidence 677888999998877665554322 11101 1122347899999999999999999999999999999999999
Q ss_pred eCCCCChhHHH----HHHHHHHHhCCCCCcEEEeecc--hhhHhhhhcCCCccEEEEeccchHHHHHHHHHHhcCCceee
Q 001665 371 KPSEKNPGTSM----ILAALAMEAGLPDGVLNIVHGT--NDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQS 444 (1035)
Q Consensus 371 KPS~~ap~ta~----~L~ell~eAGlP~gvv~vV~g~--~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~l~Pv~l 444 (1035)
|||+.+|+++. ++.++|.++|+|+|+||+|+|+ .+.++.|+.|++|++|.||||+.+|+.|++.++ .+++++
T Consensus 227 KPs~~tpl~~~~~~~~l~e~l~eAGlP~gvv~lv~g~~g~~~~~~L~~~p~v~~I~FTGSt~~G~~I~~~aa--~~~v~l 304 (551)
T TIGR02288 227 KPHPGAILPLALTVQVAREVLGEAGFDPNLVTLAAFDPGHEAAQRLATDPAVRIIDFTGSNAFGQWLEQNAR--QAQVYT 304 (551)
T ss_pred ECCcccchhHHHHHHHHHHHHHHcCcChhHEEEecCCCcHHHHHHHHhCCCccEEEEECCHHHHHHHHHhcc--cCcEEe
Confidence 99999999765 5679999999999999999984 478899999999999999999999999998876 489999
Q ss_pred cCCCcceEEEcCCCCHHHHHHHHHHHHhccCCCCccCCceEEEeCc---------cH-HHHHHHHHHHHhcccccCCCCC
Q 001665 445 NRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGS---------SV-QWEDELVELAKALKVNVGTDAS 514 (1035)
Q Consensus 445 ElGGknp~IV~~dADld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~---------i~-~f~e~Lv~~~~~lkvG~p~d~~ 514 (1035)
|||||||+||++|||++.|++.+++++|.|+||.|+++++|||+++ ++ +|+++|+++++++ +|+|.++.
T Consensus 305 ElGGknp~IV~~dADld~aa~~i~~~~f~~sGQ~Cta~~ri~V~~~~i~~~~g~~i~def~~~L~~~~~~l-vGdp~~~~ 383 (551)
T TIGR02288 305 EKAGVNTVIIESTDDYKAMLRNLAFSLSLYSGQMCTTTQAILVPRDGIRTDQGRKSYDEVAADLATAIDGL-LGDPARAT 383 (551)
T ss_pred ecCCcCeEEEcCCCCHHHHHHHHHHHHHhhCCCCCCCCCEEEEeccccccccchhHHHHHHHHHHHHHHHh-cCCccccc
Confidence 9999999999999999999999999999999999999999999998 57 9999999999999 99999999
Q ss_pred CCcCCCcCHHHHHHHHHHHHHHHHCCCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecCCHH
Q 001665 515 ADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLE 594 (1035)
Q Consensus 515 ~~~Gpli~~~~~~rl~~~i~~av~~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~e 594 (1035)
+++|||+++.+++++ ++++++| +++++|.....+..+.++|++|||+....++|.+++||+||||++|++|+|+|
T Consensus 384 ~~~Gplis~~~~~ri----~~a~~~G-~v~~gG~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FGPVl~V~~~~d~d 458 (551)
T TIGR02288 384 AVLGAIQSPDTLARI----AEARALG-EVLLASTKIEHPEFPGARVRTPLLLKCDAADEAAYMQERFGPIAFVVAVDDGA 458 (551)
T ss_pred ccccCcCCHHHHHHH----HHHHhCC-CEEEcCccCCCCCCCCCEEeccEEEEcCCCCCHHHhCCCcCCEEEEEEECCHH
Confidence 999999999999995 5667788 67777754322222334689999995443599999999999999999999999
Q ss_pred HHHHHHHhc--CCC-cEEEEEcCCHHHHHHHHhcc----------ceeEEEEcCCcCCCCCCCCCCCCC-CcCcHHHHHh
Q 001665 595 EAIKMVNRN--RFV-NGASIFTSSGLAARKFQNEI----------EARLVGINVPVPSSFSSINESGEF-NFCGKSGVQF 660 (1035)
Q Consensus 595 eAI~laN~~--~~G-LsasVfS~d~~~a~~~a~~l----------~sG~V~IN~~~~~PfGG~g~SG~G-~~~G~~g~~~ 660 (1035)
|||+++|++ +|| |+++|||+|.+.++++.+++ ++|.|+||++ .+|++...||.- .-+..+.--.
T Consensus 459 eAi~~aN~~~~~~G~Lta~VfT~d~~~~~~~~~~~~~~~~~l~iN~~G~v~vN~~--~~~~~~~~sg~n~~a~~~~~~~~ 536 (551)
T TIGR02288 459 HAVELARRSVREKGAMTVGAYTTDPEVVDAVQEAAWDAAVALSLNLTGGVFVNQS--AAFSDFHGTGGNPAANASLSDGA 536 (551)
T ss_pred HHHHHHhcCCCCCCCceEEEEeCCHHHHHHHHHHHHHhccCeeecCCceEEEccC--CCCCCCCCCCCCCccCCcccchh
Confidence 999999998 566 99999999999999999999 9999999987 789888888753 2233344445
Q ss_pred cceeeEEEEe
Q 001665 661 YTQIKTVAQQ 670 (1035)
Q Consensus 661 ft~~k~v~~~ 670 (1035)
|...+.-+++
T Consensus 537 ~~~~r~~~~~ 546 (551)
T TIGR02288 537 FVANRFRVVQ 546 (551)
T ss_pred hhhcceEEEE
Confidence 6665555444
|
This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278. |
| >cd07129 ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-71 Score=650.76 Aligned_cols=409 Identities=21% Similarity=0.226 Sum_probs=369.1
Q ss_pred HHHHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhhc--
Q 001665 241 FKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQI-- 318 (1035)
Q Consensus 241 v~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e~La~~i~~etGk~~~eA~~EV~~a~~~l~~~~~~a~~~~-- 318 (1035)
+++|++.|++||+.|+.++.++|.++|+++++.|+++.++|+++++.|+||+..++..|+..+++.+++++..+....
T Consensus 1 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gkp~~~~~~ev~~~~~~l~~~a~~~~~~~~~ 80 (454)
T cd07129 1 VDAAAAAAAAAFESYRALSPARRAAFLEAIADEIEALGDELVARAHAETGLPEARLQGELGRTTGQLRLFADLVREGSWL 80 (454)
T ss_pred ChHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 478999999999999999999999999999999999999999999999999999999999999999999887665322
Q ss_pred CccccCC------CCCCcceeeeccceeEEEECCCCcchhc--hHHHHHHHHhcCCEEEEeCCCCChhHHHHHHHHH---
Q 001665 319 GEFVPNA------LCGLDTYCFREPLGVCAGICPFNFPDMT--PLWMFSIAVTCGNTFILKPSEKNPGTSMILAALA--- 387 (1035)
Q Consensus 319 g~~~~~~------~~g~~~~~~~ePlGVV~iI~P~N~Pl~~--~~~~l~~ALaaGNaVVlKPS~~ap~ta~~L~ell--- 387 (1035)
+...... ..+...+++++|+|||++|+|||||+.+ +++++++||++||+||+|||+.+|.++.++++++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~a~ALaaGN~VVlKps~~~p~t~~~l~~~~~~~ 160 (454)
T cd07129 81 DARIDPADPDRQPLPRPDLRRMLVPLGPVAVFGASNFPLAFSVAGGDTASALAAGCPVVVKAHPAHPGTSELVARAIRAA 160 (454)
T ss_pred cccccccccccCCCCCccceEEeeccceEEEECCCCCchhhhhhhhhHHHHHHcCCeEEEEcCCCCchHHHHHHHHHHHH
Confidence 1111110 1123457889999999999999999987 4589999999999999999999999999988876
Q ss_pred -HHhCCCCCcEEEeecc-hhhHhhhhcCCCccEEEEeccchHHHHHHHHHHh--cCCceeecCCCcceEEEcCCC---CH
Q 001665 388 -MEAGLPDGVLNIVHGT-NDVINHICDDEDIKAISFVASSTASVQMYARAAA--RGKRVQSNRGGKNYAIIMPDA---SI 460 (1035)
Q Consensus 388 -~eAGlP~gvv~vV~g~-~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~--~l~Pv~lElGGknp~IV~~dA---Dl 460 (1035)
.++|+|+|+||+|+|+ .+.+.+|+.|++|++|+||||+.+|+.|++++++ +++|+++|+|||||+||++|| |+
T Consensus 161 l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~aa~~~~~~p~~lElGG~n~~iV~~da~~~dl 240 (454)
T cd07129 161 LRATGLPAGVFSLLQGGGREVGVALVKHPAIKAVGFTGSRRGGRALFDAAAARPEPIPFYAELGSVNPVFILPGALAERG 240 (454)
T ss_pred HHHhCCChhheEEeeCCcHHHHHHHhcCCCccEEEEeCChHHHHHHHHHhhccCccceeEeecCCcCcEEEeCCcchHHH
Confidence 4889999999999995 4788999999999999999999999999999998 699999999999999999999 89
Q ss_pred HHHHHHHHHHHhccCCCCccCCceEEEeCc-cH-HHHHHHHHHHHhcccccCCCCCCCcCCCcCHHHHHHHHHHHHHHHH
Q 001665 461 DATLNALVSAGFGAAGERCTALSTAVFVGS-SV-QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVD 538 (1035)
Q Consensus 461 d~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~-i~-~f~e~Lv~~~~~lkvG~p~d~~~~~Gpli~~~~~~rl~~~i~~av~ 538 (1035)
+.|++.+++++|.|+||.|+++++|||+++ ++ +|+++|+++++++++ |+++++...+++.+.|+++++
T Consensus 241 ~~aa~~i~~~~~~~~GQ~C~a~~rv~v~~~~i~d~f~~~l~~~~~~~~~----------g~~~~~~~~~~~~~~i~~a~~ 310 (454)
T cd07129 241 EAIAQGFVGSLTLGAGQFCTNPGLVLVPAGPAGDAFIAALAEALAAAPA----------QTMLTPGIAEAYRQGVEALAA 310 (454)
T ss_pred HHHHHHHHHHHhcCCCCeecCCceEEEeCcccHHHHHHHHHHHHhccCC----------CCCcChHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999 88 899999999998865 467777888888899999999
Q ss_pred C-CCcEeeCCcccccCCCCCCceeeceEEecCC---CCCccccccccCcceeEEecCCHHHHHHHHHhcCCCcEEEEEcC
Q 001665 539 N-GASLLLDGRNIVVPGYENGNFVGPTILRDVT---SNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTS 614 (1035)
Q Consensus 539 ~-GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~---~d~~i~~eEiFGPVL~V~~~~d~eeAI~laN~~~~GLsasVfS~ 614 (1035)
+ |+++++||... .+|+|++|||+.... ++|.+++||+||||++|++|+|.||||+++|++.|||++||||+
T Consensus 311 ~~ga~~l~gg~~~-----~~g~~~~Ptvl~~~~~~~~~~~i~~~E~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~vft~ 385 (454)
T cd07129 311 APGVRVLAGGAAA-----EGGNQAAPTLFKVDAAAFLADPALQEEVFGPASLVVRYDDAAELLAVAEALEGQLTATIHGE 385 (454)
T ss_pred cCCcEEEeCCCcC-----CCCCccCCEEEEccCCccccchhhcccCCCCeEEEEEeCCHHHHHHHHhcCCCCcEEEEEcc
Confidence 8 99999998631 368999999998655 68999999999999999999999999999999999999999999
Q ss_pred C--HHHHHHHHhcc--ceeEEEEcCCc-------CCCCCC-CCCCCCCCc--CcHHHHHhccee
Q 001665 615 S--GLAARKFQNEI--EARLVGINVPV-------PSSFSS-INESGEFNF--CGKSGVQFYTQI 664 (1035)
Q Consensus 615 d--~~~a~~~a~~l--~sG~V~IN~~~-------~~PfGG-~g~SG~G~~--~G~~g~~~ft~~ 664 (1035)
| .+.+++++.++ ++|+|+||... .+|||| +|.||+|++ +|.+++++|++.
T Consensus 386 d~~~~~a~~~~~~l~~~~G~v~iN~~~~~~~~~~~~pfgG~~k~sg~g~~~~~g~~~~~~~~~~ 449 (454)
T cd07129 386 EDDLALARELLPVLERKAGRLLFNGWPTGVEVCPAMVHGGPYPATTDPRFTSVGTAAIERFLRP 449 (454)
T ss_pred CchHHHHHHHHHHHHhhCcEEEECCCCccccccCCCCCCCCcCCCCCCccccccHHHHHHhccc
Confidence 9 79999999999 69999999752 279999 999999999 799999999986
|
Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids. |
| >cd07127 ALDH_PAD-PaaZ Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-70 Score=646.86 Aligned_cols=478 Identities=18% Similarity=0.234 Sum_probs=399.7
Q ss_pred cccCCCCCCCCCCCCCCCCC---------CCCCCCCccceEEcCEEecCCCCCeEEeecCCCCCeEEEecCCCHHHHHHH
Q 001665 174 KSWRPNRSTPVNTSASPSGV---------SPNIDNNRVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDA 244 (1035)
Q Consensus 174 ~~~~~~~~~p~~~~~~~~~~---------~~~~~~~~~~~~I~G~~~~~~~~~~~~v~nP~tGevi~~v~~~s~~dv~~a 244 (1035)
+-|+|....|.+..|+.... ++.. ++.++ ..+.++....++||+|++++++++.+ +++++
T Consensus 21 ~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~-~~~~~-------~~~~~~~~~~~~~P~~~~l~~~~~~a---dv~~a 89 (549)
T cd07127 21 GYWSPFPESPSPKIYGETAAAAGKAAFEALLGQ-RFDLD-------QPGASGWVGGEVSPYGVELGVTYPQC---DPDAL 89 (549)
T ss_pred CCcCCCCCCCCccccCCcCcHhHHHHHHHHhCC-CccCC-------CCCCCCCeeeeECCCCCcEEEEEchH---HHHHH
Confidence 45677666666666654321 1111 33322 23345678999999999999999987 89999
Q ss_pred HHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHH-----HHHHHHHHHHHHHHHHHhhcC
Q 001665 245 VDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQR-----DVLFGLEVVEQACAVATLQIG 319 (1035)
Q Consensus 245 v~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e~La~~i~~etGk~~~eA~~-----EV~~a~~~l~~~~~~a~~~~g 319 (1035)
|++|++||+.|+.++.++|.++|++++++|++++++|+.+++.|+||++.++.. |+..+++.+++++.....+.+
T Consensus 90 i~aA~~A~~~W~~~~~~~R~~il~~~a~~l~~~~~ela~a~~~e~Gk~~~~a~qa~~~~evd~a~e~~~~a~~~~~~~~~ 169 (549)
T cd07127 90 LAAARAAMPGWRDAGARARAGVCLEILQRLNARSFEMAHAVMHTTGQAFMMAFQAGGPHAQDRGLEAVAYAWREMSRIPP 169 (549)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHCCCHHHHHhcccHHHHHHHHHHHHHHHHHHHhccc
Confidence 999999999999999999999999999999999999999999999999988753 799999999999887766654
Q ss_pred ccccCCCCC------CcceeeeccceeEEEECCCCcchhchHHHHHHHHhcCCEEEEeCCCCChhHHH----HHHHHHHH
Q 001665 320 EFVPNALCG------LDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSM----ILAALAME 389 (1035)
Q Consensus 320 ~~~~~~~~g------~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~ALaaGNaVVlKPS~~ap~ta~----~L~ell~e 389 (1035)
........+ .....+++|+|||++|+|||||+++.+..+++||++||+||+|||+.+|+++. .+.++|.+
T Consensus 170 ~~~w~~~~~~~~~l~~~k~~~~~P~GVv~vI~p~nfP~~~~~~~i~~ALaaGN~VVvKPs~~a~ls~~~~~~~i~~~l~e 249 (549)
T cd07127 170 TAEWEKPQGKHDPLAMEKTFTVVPRGVALVIGCSTFPTWNGYPGLFASLATGNPVIVKPHPAAILPLAITVQVAREVLAE 249 (549)
T ss_pred cccccCCCCCcccccccceeEEecccEEEEEeCcCChHHHHHHHHHHHHhcCCeEEEECCcccchhHHHHHHHHHHHHHH
Confidence 322110011 12234789999999999999999999999999999999999999999999864 45588999
Q ss_pred hCCCCCcEEEeecc--hhhHhhhhcCCCccEEEEeccchHHHHHHHHHHhcCCceeecCCCcceEEEcCCCCHHHHHHHH
Q 001665 390 AGLPDGVLNIVHGT--NDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMPDASIDATLNAL 467 (1035)
Q Consensus 390 AGlP~gvv~vV~g~--~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~l~Pv~lElGGknp~IV~~dADld~Aa~~I 467 (1035)
+|+|+|+||+|+++ .+.+..|+.|++|++|.||||+.+|+.|++.++ .+|+++|+||||++||++|||++.|++.+
T Consensus 250 AGlP~gvv~~v~g~~~~~~~~~L~~~p~v~~I~FTGS~~~G~~i~~~a~--~~~v~~ElGGkn~~IV~~dADl~~aa~~i 327 (549)
T cd07127 250 AGFDPNLVTLAADTPEEPIAQTLATRPEVRIIDFTGSNAFGDWLEANAR--QAQVYTEKAGVNTVVVDSTDDLKAMLRNL 327 (549)
T ss_pred cCcCcccEEEEeCCCcHHHHHHHHhCCCCCEEEEECCHHHHHHHHHHhc--cCcEEEecCCcCeEEECCCCCHHHHHHHH
Confidence 99999999999984 468899999999999999999999999999887 48999999999999999999999999999
Q ss_pred HHHHhccCCCCccCCceEEEeCc---------cH-HHHHHHHHHHHhcccccCCCCCCCcCCCcCHHHHHHHHHHHHHHH
Q 001665 468 VSAGFGAAGERCTALSTAVFVGS---------SV-QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAV 537 (1035)
Q Consensus 468 v~s~f~naGQ~C~a~~~vlV~~~---------i~-~f~e~Lv~~~~~lkvG~p~d~~~~~Gpli~~~~~~rl~~~i~~av 537 (1035)
++|+|.++||.|+++++|||+++ ++ +|+++|+++++++ +|+|.+..+++|||+++.+++++.+ ++
T Consensus 328 ~~~~f~~sGQ~C~a~~ri~V~~s~i~~~~g~~i~d~f~~~L~~~~~~l-~Gdp~~~~~~~Gpli~~~~~~ri~~----a~ 402 (549)
T cd07127 328 AFSLSLYSGQMCTTPQNIYVPRDGIQTDDGRKSFDEVAADLAAAIDGL-LADPARAAALLGAIQSPDTLARIAE----AR 402 (549)
T ss_pred HHHHHccCCCCCCCCCEEEEECCccccccchhHHHHHHHHHHHHHHHh-cCCccccccccCCcCCHHHHHHHHH----HH
Confidence 99999999999999999999998 67 9999999999999 9999999999999999999999865 55
Q ss_pred HCCCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecCCHHHHHHHHHhc--CC-CcEEEEEcC
Q 001665 538 DNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRN--RF-VNGASIFTS 614 (1035)
Q Consensus 538 ~~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI~laN~~--~~-GLsasVfS~ 614 (1035)
+.|+ +++||.....|..+.++|++||||..+.++|.+++||+||||++|++|+|.+|||+++|++ ++ ||+++|||+
T Consensus 403 ~~g~-vl~gg~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FGPVl~V~~~~d~~eai~~an~~~~~~ggLt~sVfs~ 481 (549)
T cd07127 403 QLGE-VLLASEAVAHPEFPDARVRTPLLLKLDASDEAAYAEERFGPIAFVVATDSTDHSIELARESVREHGAMTVGVYST 481 (549)
T ss_pred hCCC-EEEcCCcCCCcCCCCceEEeCEEEEeCCCCCHHHcCCCcCceEEEEEeCCHHHHHHHHHhcccCCCCceEEEEcC
Confidence 5665 8888865433333345677999999888999999999999999999999999999999997 34 699999999
Q ss_pred CHHHHHHHHhc-ccee-EEEEcCCc------CCCCCCCCCCCCC-CcCcHHHHHhcceeeEEEEe
Q 001665 615 SGLAARKFQNE-IEAR-LVGINVPV------PSSFSSINESGEF-NFCGKSGVQFYTQIKTVAQQ 670 (1035)
Q Consensus 615 d~~~a~~~a~~-l~sG-~V~IN~~~------~~PfGG~g~SG~G-~~~G~~g~~~ft~~k~v~~~ 670 (1035)
|.+.++++.+. ..+| .++||... ++||||+..||.- .-+.....-.|...+.-+++
T Consensus 482 D~~~~~~~~~~~~~~~~~~~iN~tg~v~~~q~~~Fg~~~~sg~n~~a~~~~~~~~fv~~r~~~~~ 546 (549)
T cd07127 482 DPEVVERVQEAALDAGVALSINLTGGVFVNQSAAFSDFHGTGANPAANAALTDGAFVANRFRVVQ 546 (549)
T ss_pred CHHHHHHHHHHHHHhcCcEEEcCCceEEEecCcCCCCCCCCCCCcccccccchhhhhhcceEEEE
Confidence 99999999987 4555 88888541 1679999999864 33344555556666655544
|
Phenylacetic acid degradation (PAD) proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system. This CD is limited to bacterial monofunctional enzymes. |
| >cd07084 ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-70 Score=641.65 Aligned_cols=414 Identities=19% Similarity=0.216 Sum_probs=369.6
Q ss_pred HHHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhh--cC
Q 001665 242 KDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQ--IG 319 (1035)
Q Consensus 242 ~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e~La~~i~~etGk~~~eA~~EV~~a~~~l~~~~~~a~~~--~g 319 (1035)
++||+.|++||+.|+.++.++|.++|++++++|+++.++|+.+++.|+||++ ++..|+..+++.+++++..+... .+
T Consensus 2 ~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~-~~~~ev~~~i~~~~~~~~~~~~~~~~~ 80 (442)
T cd07084 2 ERALLAADISTKAARRLALPKRADFLARIIQRLAAKSYDIAAGAVLVTGKGW-MFAENICGDQVQLRARAFVIYSYRIPH 80 (442)
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHcCCch-hhhhhhcchHHHHHHHHHHHHhccccc
Confidence 5799999999999999999999999999999999999999999999999999 77789999999999988766532 11
Q ss_pred cc--ccCCCCCCcceeeeccceeEEEECCCCcchhchHHHHHHHHhcCCEEEEeCCCCChhHHHHHHHHHHHhCC-CCCc
Q 001665 320 EF--VPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGL-PDGV 396 (1035)
Q Consensus 320 ~~--~~~~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~ALaaGNaVVlKPS~~ap~ta~~L~ell~eAGl-P~gv 396 (1035)
.. ......+...+.+++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.++..|++++.++|+ |+|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~vvlKps~~~p~~~~~l~~~l~~ag~~P~g~ 160 (442)
T cd07084 81 EPGNHLGQGLKQQSHGYRWPYGPVLVIGAFNFPLWIPLLQLAGALAMGNPVIVKPHTAVSIVMQIMVRLLHYAGLLPPED 160 (442)
T ss_pred cccccCCCCccccceEEeecceeEEEEcCCccHhHHHHHHHHHHHHcCCeEEEECCCCchHHHHHHHHHHHHhCCCCccc
Confidence 11 11111134567899999999999999999999999999999999999999999999999999999999998 9999
Q ss_pred EEEeecchhhHhhhhcCCCccEEEEeccchHHHHHHHHHHhcCCceeecCCCcceEEEcCCC-CHHHHHHHHHHHHhccC
Q 001665 397 LNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMPDA-SIDATLNALVSAGFGAA 475 (1035)
Q Consensus 397 v~vV~g~~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~l~Pv~lElGGknp~IV~~dA-Dld~Aa~~Iv~s~f~na 475 (1035)
+++|+|+.+.+..|+.|+++++|+||||+.+|+.|++.++. +|+++|+|||||+||++|| |++.|++.+++++|.|+
T Consensus 161 ~~~v~g~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~a~~--~~v~lElgG~~~~iV~~dadd~~~a~~~i~~~~~~~~ 238 (442)
T cd07084 161 VTLINGDGKTMQALLLHPNPKMVLFTGSSRVAEKLALDAKQ--ARIYLELAGFNWKVLGPDAQAVDYVAWQCVQDMTACS 238 (442)
T ss_pred eEEeeCCcHHHHHHHcCCCCCEEEEECCHHHHHHHHHhccC--CcEEEeccCcCcEEECCChhhHHHHHHHHHHHHhccc
Confidence 99999976788899999999999999999999999998875 8999999999999999999 69999999999999999
Q ss_pred CCCccCCceEEEeCc-cH-HHHHHHHHHHHhcccccCCCCCCCcCCCcCHHHHHHHHHHHHHHHHC-CCcEeeCCccccc
Q 001665 476 GERCTALSTAVFVGS-SV-QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDN-GASLLLDGRNIVV 552 (1035)
Q Consensus 476 GQ~C~a~~~vlV~~~-i~-~f~e~Lv~~~~~lkvG~p~d~~~~~Gpli~~~~~~rl~~~i~~av~~-GAkvl~gG~~~~~ 552 (1035)
||.|++++++||+++ ++ +|+++|++.++++++| ++.+||++++ ++.++|++++++ |+++++||.....
T Consensus 239 GQ~C~a~~rl~V~~~~i~~~f~~~l~~~~~~~~~g-----~~~~gpl~~~----~~~~~i~~a~~~gga~~~~gg~~~~~ 309 (442)
T cd07084 239 GQKCTAQSMLFVPENWSKTPLVEKLKALLARRKLE-----DLLLGPVQTF----TTLAMIAHMENLLGSVLLFSGKELKN 309 (442)
T ss_pred CCeecCCcEEEEeCCccHHHHHHHHHHHHHhcccC-----ccccChhhhH----HHHHHHHHHHhcCCcEEEeCCccccc
Confidence 999999999999999 77 8999999999999998 6789999775 456667777777 5999999864221
Q ss_pred C--CCCCCceeeceEEecCCCCC---ccccccccCcceeEEecCC--HHHHHHHHHhcCCCcEEEEEcCCHHHHHHHHhc
Q 001665 553 P--GYENGNFVGPTILRDVTSNM---ECYKEEIFGPVLLNMQADS--LEEAIKMVNRNRFVNGASIFTSSGLAARKFQNE 625 (1035)
Q Consensus 553 p--~~~~g~fv~PTIl~~v~~d~---~i~~eEiFGPVL~V~~~~d--~eeAI~laN~~~~GLsasVfS~d~~~a~~~a~~ 625 (1035)
. ....|+|++||||.+++++| .+++||+||||++|++|+| ++|||+++|+++|||+++|||+|.+.+++++++
T Consensus 310 ~~~~~~~g~~~~Ptvl~~~~~~~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~ 389 (442)
T cd07084 310 HSIPSIYGACVASALFVPIDEILKTYELVTEEIFGPFAIVVEYKKDQLALVLELLERMHGSLTAAIYSNDPIFLQELIGN 389 (442)
T ss_pred CCCCCcCCcccCCeEEEecCcccccchHHheeccCceEEEEEeCCccHHHHHHHHHhCCCCeeEEEEeCCHHHHHHHHHH
Confidence 1 11258999999999999997 9999999999999999999 999999999999999999999999999999999
Q ss_pred c-ceeEEEEcCC--cC----CCCCC-CCCCCCCCcC-cHHHHHhcceeeEE
Q 001665 626 I-EARLVGINVP--VP----SSFSS-INESGEFNFC-GKSGVQFYTQIKTV 667 (1035)
Q Consensus 626 l-~sG~V~IN~~--~~----~PfGG-~g~SG~G~~~-G~~g~~~ft~~k~v 667 (1035)
+ ++|+|+||.. .. .|||| .|.||+|+.. |.+++++|++.+.+
T Consensus 390 l~~~G~v~iN~~~~~~~~~~~~~gG~~k~sG~g~~~~g~~~~~~~~~~~~~ 440 (442)
T cd07084 390 LWVAGRTYAILRGRTGVAPNQNHGGGPAADPRGAGIGGPEAIKLVWRCHAE 440 (442)
T ss_pred HHhcCeEEECCCCCCCccccccCCCCCCCCCCCccccchHHhhheeeeeee
Confidence 9 9999999965 21 57866 8899999985 99999999987654
|
ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway. |
| >cd07081 ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-70 Score=637.06 Aligned_cols=405 Identities=17% Similarity=0.149 Sum_probs=347.5
Q ss_pred HHHHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHH--HHHHHHHHHhhc
Q 001665 241 FKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEV--VEQACAVATLQI 318 (1035)
Q Consensus 241 v~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e~La~~i~~etGk~~~eA~~EV~~a~~~--l~~~~~~a~~~~ 318 (1035)
+++|+++|++||+.|+.+++++|.++|++++++|++++++|+++++.|+||++.+++.++..++.. .++++ ....
T Consensus 1 ~~~Ai~~A~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~ea~~~~~~~~~~~~~~~~~---~~~~ 77 (439)
T cd07081 1 LDDAVAAAKVAQQGLSCKSQEMVDLIFRAAAEAAEDARIDLAKLAVSETGMGRVEDKVIKNHFAAEYIYNVYK---DEKT 77 (439)
T ss_pred CHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHh---cccc
Confidence 478999999999999999999999999999999999999999999999999999998766544432 22222 1112
Q ss_pred CccccCCCCCCcceeeeccceeEEEECCCCcchhchHHHHHHHHhcCCEEEEeCCCCChhHHHHHHHHHH----HhCCCC
Q 001665 319 GEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAM----EAGLPD 394 (1035)
Q Consensus 319 g~~~~~~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~ALaaGNaVVlKPS~~ap~ta~~L~ell~----eAGlP~ 394 (1035)
+...+. ..+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++. ++|+|+
T Consensus 78 ~~~~~~-~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~~l~~aG~P~ 156 (439)
T cd07081 78 CGVLTG-DENGGTLIIAEPIGVVASITPSTNPTSTVIFKSLISLKTRNSIIFSPHPRAKKVTQRAATLLLQAAVAAGAPE 156 (439)
T ss_pred CceecC-CCCCceEEEEecceEEEEECCCcchHHHHHHHHHHHHhcCCeEEEECCccchHHHHHHHHHHHHHHHHcCCCh
Confidence 221121 123345788999999999999999999999999999999999999999999999988888875 679999
Q ss_pred CcEEEeec-chhhHhhhhcCCCccEEEEeccchHHHHHHHHHHhcCCceeecCCCcceEEEcCCCCHHHHHHHHHHHHhc
Q 001665 395 GVLNIVHG-TNDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFG 473 (1035)
Q Consensus 395 gvv~vV~g-~~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~l~Pv~lElGGknp~IV~~dADld~Aa~~Iv~s~f~ 473 (1035)
|+||+|+| +.+.+++|+.|++|++|.||||+. |++.|+++++|+++|||||+|+||++|||++.|++.+++++|+
T Consensus 157 gvv~~v~g~~~~~g~~L~~~~~V~~V~FTGs~~----v~~~aa~~~k~~~lElGGk~p~IV~~dADl~~Aa~~iv~~~~~ 232 (439)
T cd07081 157 NLIGWIDNPSIELAQRLMKFPGIGLLLATGGPA----VVKAAYSSGKPAIGVGAGNTPVVIDETADIKRAVQSIVKSKTF 232 (439)
T ss_pred hhEEEEcCCCHHHHHHHHcCCCCCEEEEECCHH----HHHHHHhcCCCEEEEcCCCCeEEEcCCCCHHHHHHHHHHHHhc
Confidence 99999998 457889999999999999999986 6778889999999999999999999999999999999999999
Q ss_pred cCCCCccCCceEEEeCccH-HHHHHHHHHHHhcccccCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCcEeeCCccccc
Q 001665 474 AAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVV 552 (1035)
Q Consensus 474 naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d~~~~~Gpli~~~~~~rl~~~i~~av~~GAkvl~gG~~~~~ 552 (1035)
|+||.|++.+++||+++++ +|+++|+++. ||+++.++++++.++|++++++|++++.|+. ...
T Consensus 233 ~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~---------------gpli~~~~~~~v~~~i~~a~~~Ga~~~gg~~-~~~ 296 (439)
T cd07081 233 DNGVICASEQSVIVVDSVYDEVMRLFEGQG---------------AYKLTAEELQQVQPVILKNGDVNRDIVGQDA-YKI 296 (439)
T ss_pred CCCCCCCCCCEEEEcHHHHHHHHHHHHHcC---------------CccCCHHHHHHHHHHHHhcCCcCCcccCCCH-HHH
Confidence 9999999999999999998 7888777653 8999999999999999999999998754332 111
Q ss_pred CCCCCCceeece---EEecCC--CCCccccccccCcceeEEecCCHHHHHHHHHhc----CCCcEEEEEcCC---HHHHH
Q 001665 553 PGYENGNFVGPT---ILRDVT--SNMECYKEEIFGPVLLNMQADSLEEAIKMVNRN----RFVNGASIFTSS---GLAAR 620 (1035)
Q Consensus 553 p~~~~g~fv~PT---Il~~v~--~d~~i~~eEiFGPVL~V~~~~d~eeAI~laN~~----~~GLsasVfS~d---~~~a~ 620 (1035)
....|.|++|| |+.+++ ++|.+++||+||||++|++|+|+||||+++|++ +|||+++|||+| .++++
T Consensus 297 -~~~~G~~~~pt~~~i~~~~~~~~~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN~~~n~~~~GLsa~V~T~d~~~~~~a~ 375 (439)
T cd07081 297 -AAAAGLKVPQETRILIGEVTSLAEHEPFAHEKLSPVLAMYRAANFADADAKALALKLEGGCGHTSAMYSDNIKAIENMN 375 (439)
T ss_pred -HHHcCCccCCCceEEEEecCCCCCCchhhhCccCceEEEEEcCCHHHHHHHHHHHhhccCCCceEEEECCCcchHHHHH
Confidence 11358899998 998888 999999999999999999999999999999975 899999999999 99999
Q ss_pred HHHhccceeEEEEcCCcC-------CCCCCCCCC--CCCCcCcHHHHHhcceeeEEEEe
Q 001665 621 KFQNEIEARLVGINVPVP-------SSFSSINES--GEFNFCGKSGVQFYTQIKTVAQQ 670 (1035)
Q Consensus 621 ~~a~~l~sG~V~IN~~~~-------~PfGG~g~S--G~G~~~G~~g~~~ft~~k~v~~~ 670 (1035)
++++++++|.|+||.+.. .-|||+..+ |+|.|+|....+|.+.++.++.+
T Consensus 376 ~~a~~l~~G~V~iN~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (439)
T cd07081 376 QFANAMKTSRFVKNGPCSQGGLGDLYNFRGWPSMTLGCGTWGGNSVSENVGPKHLVNLK 434 (439)
T ss_pred HHHhhCCceEEEEeCCccccccccccCCCCCeeEeeecCCCCCCCcCCCCChHhhheee
Confidence 999999999999997641 344444433 88999998888877776666544
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway. |
| >cd07121 ALDH_EutE Ethanolamine utilization protein EutE-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-70 Score=637.55 Aligned_cols=401 Identities=18% Similarity=0.178 Sum_probs=343.9
Q ss_pred HHHHHHHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhh
Q 001665 238 YEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQ 317 (1035)
Q Consensus 238 ~~dv~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e~La~~i~~etGk~~~eA~~EV~~a~~~l~~~~~~a~~~ 317 (1035)
-+|+++|+++|++||+.|+.++.++|.++|++++++|+++.++|++++++|+||++.++.. +.+++++...
T Consensus 3 ~~~v~~av~~A~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~~~~~------~~~~~~~~~~--- 73 (429)
T cd07121 3 FATVDDAVAAAKAAQKQYRKCTLADREKIIEAIREALLSNAEELAEMAVEETGMGRVEDKI------AKNHLAAEKT--- 73 (429)
T ss_pred hhhHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH------HHHHHHHHhc---
Confidence 3789999999999999999999999999999999999999999999999999999987652 3344443311
Q ss_pred cCcc-c-cC--CCCCCcceeeeccceeEEEECCCCcchhchHHHHHHHHhcCCEEEEeCCCCChhHHHHHHHHH----HH
Q 001665 318 IGEF-V-PN--ALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALA----ME 389 (1035)
Q Consensus 318 ~g~~-~-~~--~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~ALaaGNaVVlKPS~~ap~ta~~L~ell----~e 389 (1035)
.+.. . .. ...+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++.++++++ .+
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKpse~tp~t~~~l~~l~~~~~~~ 153 (429)
T cd07121 74 PGTEDLTTTAWSGDNGLTLVEYAPFGVIGAITPSTNPTETIINNSISMLAAGNAVVFNPHPGAKKVSAYAVELINKAIAE 153 (429)
T ss_pred CcccccccccccCCCcceEEEEcccceEEEEccCCCchhHHHHHHHHHHHcCCCEEEECCccchhHHHHHHHHHHHHHHH
Confidence 1110 1 10 011223467789999999999999999999999999999999999999999999999999887 47
Q ss_pred hCCCCCcEEEeecc-hhhHhhhhcCCCccEEEEeccchHHHHHHHHHHhcCCceeecCCCcceEEEcCCCCHHHHHHHHH
Q 001665 390 AGLPDGVLNIVHGT-NDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMPDASIDATLNALV 468 (1035)
Q Consensus 390 AGlP~gvv~vV~g~-~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~l~Pv~lElGGknp~IV~~dADld~Aa~~Iv 468 (1035)
+|+|+|+||+|+|+ .+.+.+|+.|++||+|+||||+.+|+.|++. ++|+++|+|||+|+||++|||++.|++.|+
T Consensus 154 aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~I~fTGs~~~g~~v~~~----~k~~~lelGGk~p~iV~~dADld~Aa~~i~ 229 (429)
T cd07121 154 AGGPDNLVVTVEEPTIETTNELMAHPDINLLVVTGGPAVVKAALSS----GKKAIGAGAGNPPVVVDETADIEKAARDIV 229 (429)
T ss_pred cCCCcceEEEecCCChHHHHHHHcCCCccEEEeeCCHHHHHHHHhC----CCceEeecCCCceEEEecCCCHHHHHHHHH
Confidence 89999999999984 5788999999999999999999999999875 599999999999999999999999999999
Q ss_pred HHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHhcccccCCCCCCCcCCCcCHHHHHHHHHHHHHHHHC--CCcEee
Q 001665 469 SAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDN--GASLLL 545 (1035)
Q Consensus 469 ~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d~~~~~Gpli~~~~~~rl~~~i~~av~~--GAkvl~ 545 (1035)
+++|+|+||.|+++++||||++++ +|+++|++. . .+++++.+++++.++++++++. |++++.
T Consensus 230 ~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~L~~~-~--------------~~~i~~~~~~~v~~~i~~a~~~~~ga~~~~ 294 (429)
T cd07121 230 QGASFDNNLPCIAEKEVIAVDSVADYLIAAMQRN-G--------------AYVLNDEQAEQLLEVVLLTNKGATPNKKWV 294 (429)
T ss_pred hcccccCCCCCCccceEEEeHHHHHHHHHHHHHC-C--------------CEEcCHHHHHHHHHhhcccCCCcccccccc
Confidence 999999999999999999999998 777777764 1 2478999999999999999864 789999
Q ss_pred CCcccccCCCCCCceee---ceEEecCCCCCccccccccCcceeEEecCCHHHHHHHHHhcCCCc--EEEEEcCCHHHHH
Q 001665 546 DGRNIVVPGYENGNFVG---PTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVN--GASIFTSSGLAAR 620 (1035)
Q Consensus 546 gG~~~~~p~~~~g~fv~---PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI~laN~~~~GL--sasVfS~d~~~a~ 620 (1035)
||..... ....|.|++ |||+.+++++|++++||+|||||+|++|+|+||||+++|+++||| +++|||+|.+.++
T Consensus 295 gg~~~~~-~~~~G~~~~~~~ptil~~v~~~~~i~~eE~FgPVl~v~~~~~~~eAi~~an~~~~GLghsa~I~t~d~~~a~ 373 (429)
T cd07121 295 GKDASKI-LKAAGIEVPADIRLIIVETDKDHPFVVEEQMMPILPVVRVKNFDEAIELAVELEHGNRHTAIIHSKNVENLT 373 (429)
T ss_pred CcCHHHH-HHHcCCCCCCCCeEEEEecCCCCCccccccccceEEEEEeCCHHHHHHHHHhhccCCCceEEEecCCHHHHH
Confidence 8753110 012477877 599999999999999999999999999999999999999999998 9999999999999
Q ss_pred HHHhccceeEEEEcCCcC--CCCCCCCCCCCCCcCcHHHHHhcceeeEEEE
Q 001665 621 KFQNEIEARLVGINVPVP--SSFSSINESGEFNFCGKSGVQFYTQIKTVAQ 669 (1035)
Q Consensus 621 ~~a~~l~sG~V~IN~~~~--~PfGG~g~SG~G~~~G~~g~~~ft~~k~v~~ 669 (1035)
+|++++++|+|+||.+.. +||||+|.|++ .-+|++| +..|..|++..
T Consensus 374 ~~a~~l~aG~v~iN~~~~~~~p~gG~k~s~~-~~~~~~~-~~~~~~~~~~~ 422 (429)
T cd07121 374 KMARAMQTTIFVKNGPSYAGLGVGGEGYTTF-TIAGPTG-EGLTSARTFTR 422 (429)
T ss_pred HHHhhCCceEEEEcCCCcCccccCCCccceE-EecCCcC-cCccChhhhhe
Confidence 999999999999997643 89999999987 1234444 44466666543
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source. |
| >PRK15398 aldehyde dehydrogenase EutE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-69 Score=631.22 Aligned_cols=405 Identities=17% Similarity=0.161 Sum_probs=347.0
Q ss_pred CCCHHHHHHHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHH
Q 001665 235 LTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVA 314 (1035)
Q Consensus 235 ~~s~~dv~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e~La~~i~~etGk~~~eA~~EV~~a~~~l~~~~~~a 314 (1035)
....+|+++++++|++||+.|+.++.++|.++|++++++|+++.++|+++++.|+||++.+++.+ .+++++...
T Consensus 32 ~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~la~~l~~~~~ela~~~~~E~Gk~~~ea~~~------~~~~~~~~~ 105 (465)
T PRK15398 32 MGVFASVDDAVAAAKVAQQRYQQKSLAMRQRIIDAIREALLPHAEELAELAVEETGMGRVEDKIA------KNVAAAEKT 105 (465)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcHHHHHH------HHHHHHHHh
Confidence 45688999999999999999999999999999999999999999999999999999999887732 234433322
Q ss_pred H---hhcCccccCCCCCCcceeeeccceeEEEECCCCcchhchHHHHHHHHhcCCEEEEeCCCCChhHHHHHHHHHH---
Q 001665 315 T---LQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAM--- 388 (1035)
Q Consensus 315 ~---~~~g~~~~~~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~ALaaGNaVVlKPS~~ap~ta~~L~ell~--- 388 (1035)
. ....... ...+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..|++++.
T Consensus 106 ~~~~~~~~~~~--~~~~~~~~v~~~P~GVV~~I~PwN~P~~~~~~~ia~ALaaGN~VVlKps~~tp~t~~~l~~ll~~~l 183 (465)
T PRK15398 106 PGVEDLTTEAL--TGDNGLTLIEYAPFGVIGAVTPSTNPTETIINNAISMLAAGNSVVFSPHPGAKKVSLRAIELLNEAI 183 (465)
T ss_pred ccccccccCcc--cCCCceeEEEecccEEEEEeeCCCCchHHHHHHHHHHHHhCCcEEEECCccchHHHHHHHHHHHHHH
Confidence 1 1111111 1122345778899999999999999999999999999999999999999999999999999876
Q ss_pred -HhCCCCCcEEEeec-chhhHhhhhcCCCccEEEEeccchHHHHHHHHHHhcCCceeecCCCcceEEEcCCCCHHHHHHH
Q 001665 389 -EAGLPDGVLNIVHG-TNDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMPDASIDATLNA 466 (1035)
Q Consensus 389 -eAGlP~gvv~vV~g-~~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~l~Pv~lElGGknp~IV~~dADld~Aa~~ 466 (1035)
++|+|+|++++|+| +.+.+.+|++|++||+|+||||+.+|+.|++ .++|+++|+|||||+||++|||++.|++.
T Consensus 184 ~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGS~~~G~~v~~----~~k~~~~elGGk~p~IV~~dADld~Aa~~ 259 (465)
T PRK15398 184 VAAGGPENLVVTVAEPTIETAQRLMKHPGIALLVVTGGPAVVKAAMK----SGKKAIGAGAGNPPVVVDETADIEKAARD 259 (465)
T ss_pred HHcCCCCCeEEEecCCCHHHHHHHHcCCCccEEEeeCCHHHHHHHHH----cCCceeeecCCCceEEEecCCCHHHHHHH
Confidence 68999999999998 4578899999999999999999999999988 46999999999999999999999999999
Q ss_pred HHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHhcccccCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCcEee
Q 001665 467 LVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLL 545 (1035)
Q Consensus 467 Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d~~~~~Gpli~~~~~~rl~~~i~~av~~GAkvl~ 545 (1035)
|++|+|+|+||.|+++++||||++++ +|+++|+++. ++++++.+++++.++++++.+++++++.
T Consensus 260 i~~g~~~n~GQ~C~A~~rvlV~~si~d~f~~~l~~~~---------------~~li~~~~~~~v~~~l~~~~~~~~~~~~ 324 (465)
T PRK15398 260 IVKGASFDNNLPCIAEKEVIVVDSVADELMRLMEKNG---------------AVLLTAEQAEKLQKVVLKNGGTVNKKWV 324 (465)
T ss_pred HHHhcccCCCCcCCCCceEEEeHHHHHHHHHHHHHcC---------------CccCCHHHHHHHHHHHhhcccccchhhh
Confidence 99999999999999999999999998 7777777641 3789999999999999965545667777
Q ss_pred CCcccccCCCCCCcee---eceEEecCCCCCccccccccCcceeEEecCCHHHHHHHHHhcCCCc--EEEEEcCCHHHHH
Q 001665 546 DGRNIVVPGYENGNFV---GPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVN--GASIFTSSGLAAR 620 (1035)
Q Consensus 546 gG~~~~~p~~~~g~fv---~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI~laN~~~~GL--sasVfS~d~~~a~ 620 (1035)
||..... ....|.++ +||||.+++++|++++||+|||||+|++|+|+||||+++|+++||| ++||||+|.+.++
T Consensus 325 g~~~~~i-~~~~G~~~~~~~~tvl~~v~~d~~i~~eE~FGPVl~V~~~~d~deAi~~aN~~~yGL~hs~~IfT~d~~~a~ 403 (465)
T PRK15398 325 GKDAAKI-LEAAGINVPKDTRLLIVETDANHPFVVTELMMPVLPVVRVKDVDEAIALAVKLEHGNRHTAIMHSRNVDNLN 403 (465)
T ss_pred CCCHHHH-HHhCCCCCCCCCCEEEecCCCCCchhcccccCceEEEEEeCCHHHHHHHHHhcccCCcceEEEecCCHHHHH
Confidence 7642100 01135555 4799999999999999999999999999999999999999999988 9999999999999
Q ss_pred HHHhccceeEEEEcCCcC--CCCCCCCCCCCCCcCcHHHHHhcceeeEEEE
Q 001665 621 KFQNEIEARLVGINVPVP--SSFSSINESGEFNFCGKSGVQFYTQIKTVAQ 669 (1035)
Q Consensus 621 ~~a~~l~sG~V~IN~~~~--~PfGG~g~SG~G~~~G~~g~~~ft~~k~v~~ 669 (1035)
++++++++|+|+||.+.. +||||+|.|.+ .-+|+.| ...|..|++..
T Consensus 404 ~~a~~l~~G~V~iN~~~~~~~p~gg~~~s~~-~~~~~~g-~~~~~~~~~~~ 452 (465)
T PRK15398 404 KMARAIQTSIFVKNGPSYAGLGLGGEGFTTF-TIATPTG-EGVTSARTFTR 452 (465)
T ss_pred HHHHhCCceEEEECCCCccccCcCCCCCcee-eecccCC-CCccchhhhhh
Confidence 999999999999997743 89999999875 3357777 77777776654
|
|
| >TIGR02518 EutH_ACDH acetaldehyde dehydrogenase (acetylating) | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-67 Score=621.72 Aligned_cols=406 Identities=17% Similarity=0.177 Sum_probs=349.8
Q ss_pred CCCHHHHHHHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHH
Q 001665 235 LTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQR-DVLFGLEVVEQACAV 313 (1035)
Q Consensus 235 ~~s~~dv~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e~La~~i~~etGk~~~eA~~-EV~~a~~~l~~~~~~ 313 (1035)
..+.+++++++++|++||+.|+.++.++|.++|++++++|++++++|+++++.|+||+..+++. +...+...+..++..
T Consensus 4 ~~~~~~v~~av~~A~~A~~~w~~~s~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~~~~~~~~~~~~~~~~~~~~~ 83 (488)
T TIGR02518 4 LYSIQQVRNLIRSAKVAQKKLANMTQEQIDKIVKAIVDAAYENAVKLAKMANEETGFGKWEDKVIKNVFAATIVYDSIKD 83 (488)
T ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHhh
Confidence 4678999999999999999999999999999999999999999999999999999999988764 222344455444332
Q ss_pred HHhhcCccccCCCCCCcceeeeccceeEEEECCCCcchhchHHHHHHHHhcCCEEEEeCCCCChhHHHHHHHH----HHH
Q 001665 314 ATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAAL----AME 389 (1035)
Q Consensus 314 a~~~~g~~~~~~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~ALaaGNaVVlKPS~~ap~ta~~L~el----l~e 389 (1035)
. ...+. .....+...+.+++|+|||++|.|||||+.++++++++||++||+||+|||+.+|.++..++++ +.+
T Consensus 84 ~-~~~G~--~~~~~~~~~~~~~~PlGVV~~I~P~n~P~~~~~~k~~~AL~aGNaVIlKps~~a~~s~~~~~~~l~~~l~e 160 (488)
T TIGR02518 84 M-KTIGI--LSEDKEKKVIEIAVPVGVVAGLIPSTNPTSTAIYKTLISIKARNAIVFSPHPNAKKCIIETVKLMRKAAEE 160 (488)
T ss_pred C-cccce--ecCCCCcceEEEEecceEEEEEcccCChHHHHHHHHHHHHHcCCcEEEECCccchHHHHHHHHHHHHHHHH
Confidence 2 11221 1112345567889999999999999999999999999999999999999999999999985554 579
Q ss_pred hCCCCCcEEEeec-chhhHhhhhcCCCccEEEEeccchHHHHHHHHHHhcCCceeecCCCcceEEEcCCCCHHHHHHHHH
Q 001665 390 AGLPDGVLNIVHG-TNDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMPDASIDATLNALV 468 (1035)
Q Consensus 390 AGlP~gvv~vV~g-~~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~l~Pv~lElGGknp~IV~~dADld~Aa~~Iv 468 (1035)
+|+|+|+||+|++ +.+.+.+|+.|++|++|+||||+.+ .++++.+++|+++|+|||+|+||++|||++.|++.|+
T Consensus 161 aGlP~gvv~~v~g~~~e~~~~L~~~~~vd~V~fTGs~~v----~~~a~~~~~pv~~e~gGn~p~iV~~dADld~Aa~~iv 236 (488)
T TIGR02518 161 AGAPEGAIGCITVPTIEGTNELMKNKDTSLILATGGEAM----VKAAYSSGTPAIGVGPGNGPAYIERTANVKKAVRDII 236 (488)
T ss_pred cCcCcccEEEEcCCCHHHHHHHHhCCCcCEEEEeCCHHH----HHHHHHcCCCEEEEcCCCCeEEEeCCCCHHHHHHHHH
Confidence 9999999999998 5688999999999999999999874 4566778999999999999999999999999999999
Q ss_pred HHHhccCCCCccCCceEEEeCccH-HHHHHHHHH-------HHhcccccC-CCCCCCcCCCcCHHHHHHHHHHHHHHHHC
Q 001665 469 SAGFGAAGERCTALSTAVFVGSSV-QWEDELVEL-------AKALKVNVG-TDASADVGPVVSVEVKDQISRLIQNAVDN 539 (1035)
Q Consensus 469 ~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~-------~~~lkvG~p-~d~~~~~Gpli~~~~~~rl~~~i~~av~~ 539 (1035)
+|+|+|+||.|++.++||||++++ +|+++|+++ .+.+++|++ .++++++||+++.++++++.++++.++++
T Consensus 237 ~sk~~~~Gq~C~a~~rllV~~~i~d~f~~~L~~~g~~~~~~~~~~~vg~~~~~~~~~~gp~i~~~~~~~i~~~i~~av~~ 316 (488)
T TIGR02518 237 DSKTFDNGTICASEQSIIVEECNKDAVVEELKKQGGYFLTAEEAEKLGKFILRPNGTMNPQIVGKSPQVIANLAGLTVPE 316 (488)
T ss_pred HHHhcCCCCCCCCCCEEEEeHHHHHHHHHHHHHhhhhhcCHHHHHhhcccccCCCCCcCcccccchHHHHHHHhccccCC
Confidence 999999999999999999999999 899999998 889999996 67889999999999999999999999999
Q ss_pred CCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecCCHHHHHHHHHh----cCCCcEEEEEcCC
Q 001665 540 GASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNR----NRFVNGASIFTSS 615 (1035)
Q Consensus 540 GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI~laN~----~~~GLsasVfS~d 615 (1035)
|+++++||.. .+++++++ .+|.|||||+|++|+|+||||+++|+ .+|||+++|||+|
T Consensus 317 gakll~gg~~------------------~v~~~~~~-~~E~fgPVl~v~~~~~~dEAI~~an~~i~~~~~Glta~I~T~d 377 (488)
T TIGR02518 317 DAKVLIGEQN------------------GVGNKNPY-SREKLTTILAFYTEENWHEACELSIELLQNEGAGHTLIIHSEN 377 (488)
T ss_pred CCEEEEeCCC------------------CCCCCCcc-ccCccCceEEEEEeCCHHHHHHHHHHhhhcCCCCCeEEEEeCC
Confidence 9999998852 35667776 79999999999999999999999998 6999999999999
Q ss_pred HHHHHHHHhccceeEEEEcCCcC----------CC-----CCCCCCCCCCCcCcHHHHHhcceeeEEEE
Q 001665 616 GLAARKFQNEIEARLVGINVPVP----------SS-----FSSINESGEFNFCGKSGVQFYTQIKTVAQ 669 (1035)
Q Consensus 616 ~~~a~~~a~~l~sG~V~IN~~~~----------~P-----fGG~g~SG~G~~~G~~g~~~ft~~k~v~~ 669 (1035)
.+++++|++++++|+|+||++.. .| ||+++.++.. .+.|++++++.|+|..
T Consensus 378 ~~~a~~f~~~i~ag~V~VN~~~~~~~~Ga~t~~~~~~~~G~G~~~g~st~---~~v~~~~l~~~k~v~~ 443 (488)
T TIGR02518 378 KDIVREFALKKPVSRMLVNTGGSLGGIGATTNLVPAFTLGCGAVGGSSTS---DNITPENLINIRRVAY 443 (488)
T ss_pred HHHHHHHHHhCCeeEEEEcCCCcccccccccCCCccccccccccCCCcCC---CCCCHHHhheeeEEEe
Confidence 99999999999999999997521 12 3333333322 2667778888777764
|
|
| >cd07122 ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-68 Score=616.95 Aligned_cols=402 Identities=18% Similarity=0.211 Sum_probs=353.2
Q ss_pred HHHHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHH-HHHHHHH-HHHHHHHHHHhhc
Q 001665 241 FKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQR-DVLFGLE-VVEQACAVATLQI 318 (1035)
Q Consensus 241 v~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e~La~~i~~etGk~~~eA~~-EV~~a~~-~l~~~~~~a~~~~ 318 (1035)
|++|+++|++||+.|+.++.++|.++|++++++|+++.++|++++++|+||++.+++. |+..+++ .+++++.. ...
T Consensus 1 ~~~av~~A~~A~~~W~~~~~~eR~~~L~~~a~~l~~~~eela~~~~~E~Gk~~~ea~~~e~~~~~~~~~~~~~~~--~~~ 78 (436)
T cd07122 1 VDELVERARKAQREFATFSQEQVDKIVEAVAWAAADAAEELAKMAVEETGMGVVEDKVIKNHFASEYVYNDIKDM--KTV 78 (436)
T ss_pred ChHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHhcC--cce
Confidence 4789999999999999999999999999999999999999999999999999999986 7777776 66666642 111
Q ss_pred CccccCCCCCCcceeeeccceeEEEECCCCcchhchHHHHHHHHhcCCEEEEeCCCCChhHHHHHHHHHH----HhCCCC
Q 001665 319 GEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAM----EAGLPD 394 (1035)
Q Consensus 319 g~~~~~~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~ALaaGNaVVlKPS~~ap~ta~~L~ell~----eAGlP~ 394 (1035)
+. .. ...+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++.++++++. ++|+|+
T Consensus 79 g~-~~-~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~~l~eaG~P~ 156 (436)
T cd07122 79 GV-IE-EDEEKGIVEIAEPVGVIAALIPSTNPTSTAIFKALIALKTRNAIIFSPHPRAKKCSIEAAKIMREAAVAAGAPE 156 (436)
T ss_pred ee-ec-cCCCCCeEEEeecccEEEEEeCCCCchHHHHHHHHHHHHcCCcEEEECCcchhhHHHHHHHHHHHHHHHcCCCc
Confidence 21 11 1124456788999999999999999999999999999999999999999999999999888865 789999
Q ss_pred CcEEEeec-chhhHhhhhcCCCccEEEEeccchHHHHHHHHHHhcCCceeecCCCcceEEEcCCCCHHHHHHHHHHHHhc
Q 001665 395 GVLNIVHG-TNDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFG 473 (1035)
Q Consensus 395 gvv~vV~g-~~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~l~Pv~lElGGknp~IV~~dADld~Aa~~Iv~s~f~ 473 (1035)
|+||+|+| +.+.+..|+.|++|++|+||||+.++ +.++++++|+++|+|||||+||++|||++.|++.+++|+|+
T Consensus 157 g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~v~----~~a~~~~~~~~~elgG~~p~iV~~dADl~~A~~~i~~~~f~ 232 (436)
T cd07122 157 GLIQWIEEPSIELTQELMKHPDVDLILATGGPGMV----KAAYSSGKPAIGVGPGNVPAYIDETADIKRAVKDIILSKTF 232 (436)
T ss_pred hhEEEecCCChHHHHHHHcCCCcCEEEEcCCHHHH----HHHHhcCCCEEEecCCCCeEEEcCCCCHHHHHHHHHHHhhc
Confidence 99999998 45788999999999999999999864 45678899999999999999999999999999999999999
Q ss_pred cCCCCccCCceEEEeCccH-HHHHHHHHHHHhc-------ccccC-CCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCcEe
Q 001665 474 AAGERCTALSTAVFVGSSV-QWEDELVELAKAL-------KVNVG-TDASADVGPVVSVEVKDQISRLIQNAVDNGASLL 544 (1035)
Q Consensus 474 naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~l-------kvG~p-~d~~~~~Gpli~~~~~~rl~~~i~~av~~GAkvl 544 (1035)
|+||.|+++++|||+++++ +|+++|+++...+ ++|++ .+.++.+||+++..+.+++..+++.++..|++++
T Consensus 233 ~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~~~~~~~v~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~ga~vl 312 (436)
T cd07122 233 DNGTICASEQSVIVDDEIYDEVRAELKRRGAYFLNEEEKEKLEKALFDDGGTLNPDIVGKSAQKIAELAGIEVPEDTKVL 312 (436)
T ss_pred cCCCCCCCCCEEEEechhHHHHHHHHHHhcceecCHHHHHHHHHHhhcCCCCcCccccCcCHHHHHHHcCCCCCCCCeEE
Confidence 9999999999999999998 8999999988776 88887 4667889999999999998888877777777777
Q ss_pred eCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecCCHHHHHHHHHhc----CCCcEEEEEcCCHHHHH
Q 001665 545 LDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRN----RFVNGASIFTSSGLAAR 620 (1035)
Q Consensus 545 ~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI~laN~~----~~GLsasVfS~d~~~a~ 620 (1035)
++| +.+++++|.++ +|.||||++|++|+|+||||+++|++ +|||++||||+|...++
T Consensus 313 ~~~------------------~~~v~~~~~~~-~E~FGPVl~v~~~~~~~eAi~~aN~~~~~~~~GLsa~V~T~d~~~a~ 373 (436)
T cd07122 313 VAE------------------ETGVGPEEPLS-REKLSPVLAFYRAEDFEEALEKARELLEYGGAGHTAVIHSNDEEVIE 373 (436)
T ss_pred EEe------------------cCCCCCCCcch-hcccCCeEEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCHHHHH
Confidence 654 34778899987 56799999999999999999999997 89999999999999999
Q ss_pred HHHhccceeEEEEcCCcCCCCCCCCCC----------CCCCcCcHHHHHhcceeeEEEEec
Q 001665 621 KFQNEIEARLVGINVPVPSSFSSINES----------GEFNFCGKSGVQFYTQIKTVAQQW 671 (1035)
Q Consensus 621 ~~a~~l~sG~V~IN~~~~~PfGG~g~S----------G~G~~~G~~g~~~ft~~k~v~~~~ 671 (1035)
++++++++|+|+||.+. -|||+|.+ |+|.|+|..+.++.|.+|.++++.
T Consensus 374 ~~~~~l~aG~V~IN~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (436)
T cd07122 374 EFALRMPVSRILVNTPS--SLGGIGDTYNGLAPSLTLGCGSWGGNSTSDNVGPKHLLNIKR 432 (436)
T ss_pred HHHhhCCceEEEEeCCc--cccccCccCCCCCceeeeeccccCCCcCCCCCChHHhheeEe
Confidence 99999999999999874 35555543 668899999999999999888764
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway. |
| >cd07079 ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate reductase (GPR), aldehyde dehydrogenase families 18 and 19 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-66 Score=602.19 Aligned_cols=374 Identities=20% Similarity=0.221 Sum_probs=326.0
Q ss_pred HHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHH----HHH--------HHHHHHHHHHHHH
Q 001665 243 DAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLK----AAQ--------RDVLFGLEVVEQA 310 (1035)
Q Consensus 243 ~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e~La~~i~~etGk~~~----eA~--------~EV~~a~~~l~~~ 310 (1035)
+++++|++||+.|+.++.++|.++|+++++.|+++.++|+++++.|+||+.. ++. .|+..+++.++++
T Consensus 2 ~~~~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~gk~~e~G~~~a~~~~l~~~~~ev~~~~~~~~~~ 81 (406)
T cd07079 2 ELAKRAKAASRALATLSTEQKNAALLAIADALEANRDEILEANAKDLAAAREAGLSEALLDRLLLTPERIEAMAEGLRQV 81 (406)
T ss_pred hHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhchHHHHHHhhhhHHHHHHcCCCHHHHhHhcCCHHHHHHHHHHHHHH
Confidence 5789999999999999999999999999999999999999999777666543 332 4888889999888
Q ss_pred HHHHHhhcCccccCC--CCCCcceeeeccceeEEEECCCCcchhchHHHHHHHHhcCCEEEEeCCCCChhHHHHHHHHHH
Q 001665 311 CAVATLQIGEFVPNA--LCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAM 388 (1035)
Q Consensus 311 ~~~a~~~~g~~~~~~--~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~ALaaGNaVVlKPS~~ap~ta~~L~ell~ 388 (1035)
+.... ..+...+.. ..+...+++++|+|||++|+|| +| .++++++++||++||+||+|||+.+|.++.++++++.
T Consensus 82 a~~~~-~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~p-~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~~ 158 (406)
T cd07079 82 AALPD-PVGEVLRGWTLPNGLQIEKVRVPLGVIGIIYES-RP-NVTVDAAALCLKSGNAVILRGGSEALHSNRALVEIIQ 158 (406)
T ss_pred HhcCC-CCcccccceeccCccceeEEecceEEEEEecCC-Cc-chHHHHHHHHHHhCCEEEEeCCchhhhHHHHHHHHHH
Confidence 75543 223222211 1233567889999999999996 56 6788999999999999999999999999999999986
Q ss_pred ----HhCCCCCcEEEeecc-h-hhHhhhhcCCCccEEEEeccchHHHHHHHHHHhcCCceeecCCCcceEEEcCCCCHHH
Q 001665 389 ----EAGLPDGVLNIVHGT-N-DVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMPDASIDA 462 (1035)
Q Consensus 389 ----eAGlP~gvv~vV~g~-~-e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~l~Pv~lElGGknp~IV~~dADld~ 462 (1035)
++|+|+|+||+|+|+ . +.+..|..|++||+|+||||+.+|+.|+++| ++|+++|||||||+||++|||++.
T Consensus 159 ~~l~~aG~P~gvv~~v~g~~~~~~~~~l~~~~~v~~i~fTGS~~~G~~i~~~a---~~pv~lELGGk~p~IV~~dADl~~ 235 (406)
T cd07079 159 EALEEAGLPEDAVQLIPDTDREAVQELLKLDDYIDLIIPRGGAGLIRFVVENA---TIPVIKHGDGNCHVYVDESADLEM 235 (406)
T ss_pred HHHHHcCCCcccEEEecCCChHHHHHHHcCCCCccEEEeCCCHHHHHHHHHhc---CCCEEeecCCcceEEEeCCCCHHH
Confidence 899999999999984 4 4577788999999999999999999999876 799999999999999999999999
Q ss_pred HHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHhcccccCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCCC
Q 001665 463 TLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGA 541 (1035)
Q Consensus 463 Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d~~~~~Gpli~~~~~~rl~~~i~~av~~GA 541 (1035)
|++.|++++|+|+| .|+++++||||++++ +|+++|++++++ .|+
T Consensus 236 Aa~~i~~~~f~n~G-~C~a~~rv~V~~si~d~f~~~l~~~~~~----------------------------------~ga 280 (406)
T cd07079 236 AVRIVVNAKTQRPS-VCNALETLLVHRDIAEEFLPKLAEALRE----------------------------------AGV 280 (406)
T ss_pred HHHHHHHcccCCCc-ccccceeEEEeHHHHHHHHHHHHHHHHH----------------------------------CCC
Confidence 99999999999999 999999999999998 899988887654 256
Q ss_pred cEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecCCHHHHHHHHHhcCCCcEEEEEcCCHHHHHH
Q 001665 542 SLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARK 621 (1035)
Q Consensus 542 kvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI~laN~~~~GLsasVfS~d~~~a~~ 621 (1035)
+++.|+.. ..|++|| ++++|.+++||+|||||+|++|+|+||||+++|+++|||++||||+|.+.+++
T Consensus 281 ~~~~g~~~--------~~~~~pt----v~~d~~i~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GLsa~ift~d~~~a~~ 348 (406)
T cd07079 281 ELRGDEET--------LAILPGA----KPATEEDWGTEYLDLILAVKVVDSLDEAIAHINRYGSGHTEAIVTENYETAER 348 (406)
T ss_pred EEecCHHH--------HHhcccc----cCCCcchhhhhhhCceeEEEEeCCHHHHHHHHHHhCCccccEeeeCCHHHHHH
Confidence 65433221 1377888 78999999999999999999999999999999999999999999999999999
Q ss_pred HHhccceeEEEEcCCcC----CCCCCCCCCCC----CCcCcHHHHHhcceeeEEEE
Q 001665 622 FQNEIEARLVGINVPVP----SSFSSINESGE----FNFCGKSGVQFYTQIKTVAQ 669 (1035)
Q Consensus 622 ~a~~l~sG~V~IN~~~~----~PfGG~g~SG~----G~~~G~~g~~~ft~~k~v~~ 669 (1035)
+++++++|.|+||++.. +||||.+.||+ |+++|.+++++|++.|+++.
T Consensus 349 ~~~~~~~G~v~iN~~~~~~~~~pfg~~~~sG~~~~~g~~~g~~~l~~~~~~k~i~~ 404 (406)
T cd07079 349 FLREVDSAAVYVNASTRFTDGGEFGLGAEIGISTQKLHARGPMGLEELTTYKYIVR 404 (406)
T ss_pred HHHhCCeeEEEEeCCCcccCCCccccceeeeeecCCCcCCCCcChHHhcEEEEEEe
Confidence 99999999999998642 79999999988 99999999999999999864
|
Gamma-glutamyl phosphate reductase (GPR), a L-proline biosynthetic pathway (PBP) enzyme that catalyzes the NADPH dependent reduction of L-gamma-glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The glutamate route of the PBP involves two enzymatic steps catalyzed by gamma-glutamyl kinase (GK, EC 2.7.2.11) and GPR (EC 1.2.1.41). These enzymes are fused into the bifunctional enzyme, ProA or delta(1)-pyrroline-5-carboxylate synthetase (P5CS) in plants and animals, whereas they are separate enzymes in bacteria and yeast. In humans, the P5CS (ALDH18A1), an inner mitochondrial membrane enzyme, is essential to the de novo synthesis of the amino acids proline and arginine. Tomato (Lycopersicon esculentum) has both the prokaryotic-like polycistronic operons encoding GK and GPR (PRO1, ALDH19) and the full-length, bifunctional P5CS (PRO2, ALDH18B1). |
| >PRK13805 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-65 Score=645.95 Aligned_cols=415 Identities=18% Similarity=0.221 Sum_probs=357.5
Q ss_pred EecCCCHHHHHHHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHH
Q 001665 232 QVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQR-DVLFGLEVVEQA 310 (1035)
Q Consensus 232 ~v~~~s~~dv~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e~La~~i~~etGk~~~eA~~-EV~~a~~~l~~~ 310 (1035)
.+...+.+|++++|++|++||+.|+.+++++|.++|++++++|++++++|++++++|+||++.+++. ++..+...+.++
T Consensus 5 ~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~EtGk~~~e~~~~~~~~~~~~~~~~ 84 (862)
T PRK13805 5 EMAVTNVAELDALVEKAKKAQEEFATFTQEQVDKIVRAAALAALDARIPLAKMAVEETGRGVVEDKVIKNHFASEYIYNS 84 (862)
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHH
Confidence 4567899999999999999999999999999999999999999999999999999999999998874 333333333322
Q ss_pred HHHHHhhcCccccCCCCCCcceeeeccceeEEEECCCCcchhchHHHHHHHHhcCCEEEEeCCCCChhHHHHHHHHHH--
Q 001665 311 CAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAM-- 388 (1035)
Q Consensus 311 ~~~a~~~~g~~~~~~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~ALaaGNaVVlKPS~~ap~ta~~L~ell~-- 388 (1035)
.. .....+. .....+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.
T Consensus 85 ~~-~~~~~g~--~~~~~~~~~~~~~~P~GVv~~I~pwn~P~~~~~~~~~~ALaaGN~vVlKps~~a~~t~~~~~~l~~~~ 161 (862)
T PRK13805 85 YK-DEKTVGV--IEEDDEFGIIEIAEPVGVIAGITPTTNPTSTAIFKALIALKTRNPIIFSFHPRAQKSSIAAAKIVLDA 161 (862)
T ss_pred hc-CCCcccc--cCcCCCCCeEEEeecceEEEEEeCCCChhHHHHHHHHHHHHhCCcEEEECCcchHHHHHHHHHHHHHH
Confidence 21 1111111 111124456788999999999999999999999999999999999999999999999999988865
Q ss_pred --HhCCCCCcEEEeec-chhhHhhhhcCCCccEEEEeccchHHHHHHHHHHhcCCceeecCCCcceEEEcCCCCHHHHHH
Q 001665 389 --EAGLPDGVLNIVHG-TNDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMPDASIDATLN 465 (1035)
Q Consensus 389 --eAGlP~gvv~vV~g-~~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~l~Pv~lElGGknp~IV~~dADld~Aa~ 465 (1035)
++|+|+|+||+|+| +.+.+.+|+.|++||+|+||||+.+ +++|+++++|+++|+|||+|+||++|||++.|++
T Consensus 162 l~~aG~p~g~v~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v----~~~a~~~~~pv~~e~gGk~p~iV~~dADl~~Aa~ 237 (862)
T PRK13805 162 AVAAGAPKDIIQWIEEPSVELTNALMNHPGIALILATGGPGM----VKAAYSSGKPALGVGAGNVPAYIDKTADIKRAVN 237 (862)
T ss_pred HHHcCcCcccEEEecCCCHHHHHHHHcCCCccEEEecCCHHH----HHHHHhcCCCeEEECCCCCeEEEeCCCCHHHHHH
Confidence 68999999999998 5678999999999999999999875 4677889999999999999999999999999999
Q ss_pred HHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHhcccccCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCcE-
Q 001665 466 ALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASL- 543 (1035)
Q Consensus 466 ~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d~~~~~Gpli~~~~~~rl~~~i~~av~~GAkv- 543 (1035)
.|++|+|+|+||.|+++++|||+++++ +|+++|+++. ++++++++++++.++|++++..|++.
T Consensus 238 ~i~~~k~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~g---------------~~l~~~~~~~~v~~~i~~a~~~~~~~~ 302 (862)
T PRK13805 238 DILLSKTFDNGMICASEQAVIVDDEIYDEVKEEFASHG---------------AYFLNKKELKKLEKFIFGKENGALNAD 302 (862)
T ss_pred HHHHhhhccCCCccCCCceEEEehhhHHHHHHHHHHhC---------------CeeCCHHHHHHHHHHHhhccCCCcCcc
Confidence 999999999999999999999999998 7777777652 68999999999999999987666543
Q ss_pred eeCCcccccCCCCCCceeeceE------EecCCCCCccccccccCcceeEEecCCHHHHHHHHHh----cCCCcEEEEEc
Q 001665 544 LLDGRNIVVPGYENGNFVGPTI------LRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNR----NRFVNGASIFT 613 (1035)
Q Consensus 544 l~gG~~~~~p~~~~g~fv~PTI------l~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI~laN~----~~~GLsasVfS 613 (1035)
++||..... ....|.|++||+ +.++++++.+++ |+|||||+|++|+|+||||+++|+ .++||+++|||
T Consensus 303 ~~g~~~~~~-~~~~G~~~~p~~~~~i~~l~~v~~~~~~~~-E~fgPVl~v~~~~~~deAi~~~n~~~~~~~~gl~~~i~t 380 (862)
T PRK13805 303 IVGQSAYKI-AEMAGFKVPEDTKILIAEVKGVGESEPLSH-EKLSPVLAMYKAKDFEDAVEKAEKLVEFGGLGHTAVIYT 380 (862)
T ss_pred ccCCCHHHH-HHHcCCCCCCCCeEEEEecCCCCCCCcchh-cccCcEEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEEC
Confidence 445532110 112488899997 678999999887 789999999999999999999998 48999999999
Q ss_pred CCHHHHHHHHhccceeEEEEcCCc-------------C-CCCCCCCCCCCCCcCcHHHHHhcceeeEEEEec
Q 001665 614 SSGLAARKFQNEIEARLVGINVPV-------------P-SSFSSINESGEFNFCGKSGVQFYTQIKTVAQQW 671 (1035)
Q Consensus 614 ~d~~~a~~~a~~l~sG~V~IN~~~-------------~-~PfGG~g~SG~G~~~G~~g~~~ft~~k~v~~~~ 671 (1035)
+|.+++++|++++++|+|+||.+. + +|||| |.||+|+++|+.|++.|++.|+|..+.
T Consensus 381 ~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~~~~~~~~~~~~fG~-G~~g~~~~~g~~g~~~~~~~k~v~~~~ 451 (862)
T PRK13805 381 NDDELIKEFGLRMKACRILVNTPSSQGGIGDLYNKLAPSLTLGC-GSWGGNSVSENVGAKHLLNIKTVAKRR 451 (862)
T ss_pred CCHHHHHHHHhhCCccEEEEeCCccccccccccCCcCccccccc-cCCCCCcCCCCCCHHHhheeeeeeecc
Confidence 999999999999999999999762 1 89998 999999999999999999999998764
|
|
| >PRK00197 proA gamma-glutamyl phosphate reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-66 Score=600.38 Aligned_cols=379 Identities=21% Similarity=0.224 Sum_probs=330.0
Q ss_pred HHHHHHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCH----HHHH--------HHHHHHHHH
Q 001665 239 EEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTL----KAAQ--------RDVLFGLEV 306 (1035)
Q Consensus 239 ~dv~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e~La~~i~~etGk~~----~eA~--------~EV~~a~~~ 306 (1035)
+++++++++|++||+.|+.++.++|.++|++++++|+++.++|+++++.|+|++. .++. .|+..+++.
T Consensus 4 ~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~g~~~~~g~~~~~~~~~~~~~~ev~~~~~~ 83 (417)
T PRK00197 4 EYLEELGRRAKAASRKLAQLSTAQKNRALLAIADALEANAAEILAANAKDLAAARANGLSAAMLDRLLLTEARIEGIAEG 83 (417)
T ss_pred hHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHHHHHhcCCHHHHHHHHHH
Confidence 6899999999999999999999999999999999999999999999998887764 2443 578888888
Q ss_pred HHHHHHHHHhhcCccccCC--CCCCcceeeeccceeEEEECCCCcchhchHHHHHHHHhcCCEEEEeCCCCChhHHHHHH
Q 001665 307 VEQACAVATLQIGEFVPNA--LCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILA 384 (1035)
Q Consensus 307 l~~~~~~a~~~~g~~~~~~--~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~ALaaGNaVVlKPS~~ap~ta~~L~ 384 (1035)
+++++.+... .+...+.. ..+...+++++|+|||++|+||| | .++++++++||++||+||+|||+.+|.++.+++
T Consensus 84 ~~~~a~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~p-~-~~~~~~~~~ALaaGN~vVlKPs~~tp~t~~~l~ 160 (417)
T PRK00197 84 LRQVAALPDP-VGEVLDGWTLPNGLRIGRVRVPLGVIGVIYESR-P-NVTVDAAALCLKSGNAVILRGGSEAIHSNRALV 160 (417)
T ss_pred HHHHhhcCCC-ccccccceecCCCceEEEEecCceEEEEEcCCC-c-hHHHHHHHHHHHhCCeEEEecChhhhHHHHHHH
Confidence 8888765443 23222211 12335678999999999999985 4 678899999999999999999999999999998
Q ss_pred HHH----HHhCCCCCcEEEeec-chh-hHhhhhcCCCccEEEEeccchHHHHHHHHHHhcCCceeecCCCcceEEEcCCC
Q 001665 385 ALA----MEAGLPDGVLNIVHG-TND-VINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMPDA 458 (1035)
Q Consensus 385 ell----~eAGlP~gvv~vV~g-~~e-~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~l~Pv~lElGGknp~IV~~dA 458 (1035)
+++ .++|+|+|+||+|+| +.+ .+..|..|++||+|+||||+.+|+.|++++ ++|+++|||||||+||++||
T Consensus 161 ~l~~~~l~~aGlP~gv~~~v~g~~~~~~~~~l~~~~~v~~V~fTGS~~~g~~i~~~a---~~~~~lELGGk~p~IV~~dA 237 (417)
T PRK00197 161 AVIQEALEEAGLPADAVQLVETTDRAAVGELLKLDGYVDVIIPRGGAGLIRRVVENA---TVPVIEHGDGICHIYVDESA 237 (417)
T ss_pred HHHHHHHHHcCcChhhEEEecCCChHHHHHHhccCCCccEEEecCCHHHHHHHHHhc---CCCEEeecCCcceEEEeCCC
Confidence 885 688999999999996 444 567788899999999999999999998864 69999999999999999999
Q ss_pred CHHHHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHhcccccCCCCCCCcCCCcCHHHHHHHHHHHHHHH
Q 001665 459 SIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAV 537 (1035)
Q Consensus 459 Dld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d~~~~~Gpli~~~~~~rl~~~i~~av 537 (1035)
|++.|++.+++++|+|+| .|++++++|||++++ +|+++|++++++++++
T Consensus 238 dl~~Aa~~iv~~~~~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~----------------------------- 287 (417)
T PRK00197 238 DLDKALKIVLNAKTQRPS-VCNALETLLVHEAIAEEFLPKLAEALAEAGVE----------------------------- 287 (417)
T ss_pred CHHHHHHHHHHhccCCCc-ccccceEEEEEHHHhHHHHHHHHHHHHHCCCe-----------------------------
Confidence 999999999999999999 999999999999999 8999999999887532
Q ss_pred HCCCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecCCHHHHHHHHHhcCCCcEEEEEcCCHH
Q 001665 538 DNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGL 617 (1035)
Q Consensus 538 ~~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI~laN~~~~GLsasVfS~d~~ 617 (1035)
++ +|.. ..+ |+ |||+ +.+|.+++||+|||||+|++|+|+||||+++|+++|||++||||+|.+
T Consensus 288 -----~~-~~~~------~~~-~~-PTi~---~~~~~i~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~V~t~d~~ 350 (417)
T PRK00197 288 -----LR-GDEA------ALA-LL-PDVV---PATEEDWDTEYLDLILAVKVVDSLDEAIAHINRYGSGHTEAIVTEDYA 350 (417)
T ss_pred -----Ee-cCHH------HHH-hh-cccc---cCCcchhhhhhhCceEEEEEeCCHHHHHHHHHhcCCCCceEEEeCCHH
Confidence 11 1110 012 33 9998 468999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhccceeEEEEcCCcC----CCCCCCCCCCCC----CcCcHHHHHhcceeeEEEEe
Q 001665 618 AARKFQNEIEARLVGINVPVP----SSFSSINESGEF----NFCGKSGVQFYTQIKTVAQQ 670 (1035)
Q Consensus 618 ~a~~~a~~l~sG~V~IN~~~~----~PfGG~g~SG~G----~~~G~~g~~~ft~~k~v~~~ 670 (1035)
+++++++++++|+|+||.+.. .||||.+.||+| +.+|.+|+++|++.|++++.
T Consensus 351 ~~~~~~~~l~~G~v~VN~~~~~~~~~p~G~~~~sG~g~~~~~~~g~~~l~~~~~~k~v~~~ 411 (417)
T PRK00197 351 AAERFLNEVDSAAVYVNASTRFTDGGEFGLGAEIGISTQKLHARGPMGLEELTTYKYIVLG 411 (417)
T ss_pred HHHHHHHhCCeeEEEEeCCCccCCCCccccchhheeecCCCcCCCccchHhhcEEEEEEEC
Confidence 999999999999999998642 799999999999 99999999999999998763
|
|
| >KOG2452 consensus Formyltetrahydrofolate dehydrogenase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-66 Score=562.60 Aligned_cols=446 Identities=27% Similarity=0.409 Sum_probs=404.6
Q ss_pred CccceEEcCEEecCCCCCeEEeecCCCCCeEEEecCCCHHHHHHHHHHHHHhhH--hhhCCCHHHHHHHHHHHHHHHHHh
Q 001665 200 NRVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFP--AWKNTPVATRQRIMFKLQELIRRD 277 (1035)
Q Consensus 200 ~~~~~~I~G~~~~~~~~~~~~v~nP~tGevi~~v~~~s~~dv~~av~~Ar~A~~--~W~~~s~~~R~~iL~~la~~L~~~ 277 (1035)
+....||+|+|+++.++.++..+||.+|.+|++++.++..|+++||.+|+.||+ .|..++..+|.+.|.+||++++++
T Consensus 420 ~ph~~fi~g~fv~~~~~~t~~tinp~~~~~ic~~~la~v~dvd~av~aak~afe~g~w~~~sar~rg~~~y~la~lme~h 499 (881)
T KOG2452|consen 420 MPHQLFIGGEFVDAEGAKTSETINPTDGSVICQVSLAQVTDVDKAVAAAKGAFENGRWGKISARDRGRLMYRLADLMEQH 499 (881)
T ss_pred CcHhhccCcEeecccCCccccccCCCCCCeeEEeehhHhhhHHHHHHHHhhhhhcCcccccchhhhhhhhhhccchhhhc
Confidence 344579999999999999999999999999999999999999999999999998 599999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHhhcCccccCCC--CC-CcceeeeccceeEEEECCCCcchhc
Q 001665 278 IDKLAMNITVEQGTTLKAA-QRDVLFGLEVVEQACAVATLQIGEFVPNAL--CG-LDTYCFREPLGVCAGICPFNFPDMT 353 (1035)
Q Consensus 278 ~e~La~~i~~etGk~~~eA-~~EV~~a~~~l~~~~~~a~~~~g~~~~~~~--~g-~~~~~~~ePlGVV~iI~P~N~Pl~~ 353 (1035)
+++|+.+.++|.|.-..-| +.-+.-.++..+|++++..+..|..++... +. .-..+.++|+|||++|.|||||+..
T Consensus 500 ~eelat~e~ldagavytlalkthvgmsi~~~ryfagwcdkiqg~tipi~~arpn~nl~lt~~epigv~g~i~pwnyplmm 579 (881)
T KOG2452|consen 500 QEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGSTIPINQARPNRNLTLTRKEPVGVCGIIIPWNYPLMM 579 (881)
T ss_pred cchhhhhhhccccceeeeeehhhcCceehHHHHhhhhhhhccCceeccccCCCCCcceeeecCcceeEEEeccCCchHHH
Confidence 9999999999999654444 234566788899999999988887766321 22 2346789999999999999999999
Q ss_pred hHHHHHHHHhcCCEEEEeCCCCChhHHHHHHHHHHHhCCCCCcEEEeecchh-hHhhhhcCCCccEEEEeccchHHHHHH
Q 001665 354 PLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGTND-VINHICDDEDIKAISFVASSTASVQMY 432 (1035)
Q Consensus 354 ~~~~l~~ALaaGNaVVlKPS~~ap~ta~~L~ell~eAGlP~gvv~vV~g~~e-~~~~L~~h~~vd~V~fTGS~~vG~~I~ 432 (1035)
+.|+.+++|++. + ..|+++ .|++|+++|++. +++.|..||+|.+|-||||+++|+.|+
T Consensus 580 lswk~aaclaa~---~-----------~k~~e~-------sgvini~~gsgslvg~rls~hpdvrkigftgsteig~~im 638 (881)
T KOG2452|consen 580 LSWKTAACLAAQ---V-----------LKFAEL-------TGVVNVLPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIM 638 (881)
T ss_pred HHHHHHHHHHHH---H-----------hhhhhh-------cceEEEecCCcchhccccccCCccceeccccchHHHHHHH
Confidence 999999988752 1 123333 489999999765 678999999999999999999999999
Q ss_pred HHHHhc-CCceeecCCCcceEEEcCCCCHHHHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHhcccccC
Q 001665 433 ARAAAR-GKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVG 510 (1035)
Q Consensus 433 ~aAa~~-l~Pv~lElGGknp~IV~~dADld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p 510 (1035)
+.||.+ .+.|.+||||++|+||+.|||+++|+.....+.|++-|..|++..|+++.+++. +|+.+++++++++++|+|
T Consensus 639 ~sca~snikkvslelgg~sp~iifad~dl~kav~~~~~~vff~kgenciaagr~fi~~sihd~fv~~~vee~~~~~ig~p 718 (881)
T KOG2452|consen 639 KSCAISNVKKVSLELGGESPFIIFADCDLNKAVQMGMSSVFFSKGENCIAAGRLFVEDSIHDEFVRRVVEEVRKMKVGNP 718 (881)
T ss_pred HHHhhcchheeeeeccCCCceEEEecCcHHHHHHhhccceeecCCcchhhhcceeehhhhhHHHHHHHHHHHHhhccCCc
Confidence 998865 689999999999999999999999999999999999999999999999888887 999999999999999999
Q ss_pred CCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEec
Q 001665 511 TDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQA 590 (1035)
Q Consensus 511 ~d~~~~~Gpli~~~~~~rl~~~i~~av~~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~ 590 (1035)
+|.+++.||.-...|+.++.+|++.+++.||++++||..+. ..|+|++|||+.++...|.+..||-||||+.|..|
T Consensus 719 ldr~t~hgpqnh~ahl~kl~ey~~~~v~~ga~~~~gg~~~~----r~g~~f~pti~s~i~d~~f~a~eesfgpim~is~f 794 (881)
T KOG2452|consen 719 LDRDTDHGPQNHHAHLVKLMEYCQHGVKEGATLVCGGNQVP----RPGFFFEPTVFTDVEDHMFIAKEESFGPVMIISRF 794 (881)
T ss_pred ccccccCCchhHHHHHHHHHHHHHHHhccCcEEEECCccCC----CCCcccCCeeecccchhhhhhhccccCceEEEEec
Confidence 99999999999999999999999999999999999998752 46999999999999999999999999999999999
Q ss_pred C--CHHHHHHHHHhcCCCcEEEEEcCCHHHHHHHHhccceeEEEEcCCc----CCCCCCCCCCCCCCcCcHHHHHhccee
Q 001665 591 D--SLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPV----PSSFSSINESGEFNFCGKSGVQFYTQI 664 (1035)
Q Consensus 591 ~--d~eeAI~laN~~~~GLsasVfS~d~~~a~~~a~~l~sG~V~IN~~~----~~PfGG~g~SG~G~~~G~~g~~~ft~~ 664 (1035)
+ |+|+++..+|++++||+++|||+|...+.++++.+.+|+|+||... ..||||++.||+|...|.+.+.+|...
T Consensus 795 ~d~d~~~vl~ran~tefgla~gvftrd~~k~l~v~~~l~agtvfvnty~ktdvaapfggfkqsgfgkd~ge~alneyl~~ 874 (881)
T KOG2452|consen 795 ADGDLDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFVNTYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRV 874 (881)
T ss_pred CCCCHHHHHhhccccccccccceeecccchhhhhhhhhccceEEEeeccccccccCCCCccccccccchhHHHHhhheee
Confidence 6 5899999999999999999999999999999999999999999863 299999999999999999999999999
Q ss_pred eEEEEe
Q 001665 665 KTVAQQ 670 (1035)
Q Consensus 665 k~v~~~ 670 (1035)
|+|.+.
T Consensus 875 ktit~e 880 (881)
T KOG2452|consen 875 KTVTFE 880 (881)
T ss_pred EEEEee
Confidence 998763
|
|
| >PLN02418 delta-1-pyrroline-5-carboxylate synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-64 Score=619.46 Aligned_cols=377 Identities=18% Similarity=0.222 Sum_probs=335.1
Q ss_pred HHHHHHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHHhHHHHHHHH------HHHhC--CCHHHH----HHHHHHHHHH
Q 001665 239 EEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNI------TVEQG--TTLKAA----QRDVLFGLEV 306 (1035)
Q Consensus 239 ~dv~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e~La~~i------~~etG--k~~~eA----~~EV~~a~~~ 306 (1035)
+++++++++|++||+.|+.++.++|.++|++++++|+++.++|++++ ++|+| |++.++ ..|+..+++.
T Consensus 294 ~~~~~~~~aA~~A~~~W~~~~~~eR~~~L~~~a~~l~~~~~ela~~~~~d~~~~~E~G~~k~~~~~~~~~~~ev~~~~~~ 373 (718)
T PLN02418 294 VGAREMAVAARESSRKLQALSSEERKKILLDVADALEANEELIKAENELDVAAAQEAGYEKSLVSRLTLKPGKIASLAAS 373 (718)
T ss_pred HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhHHHHHHhCCchhHHHHHhccHHHHHHHHHH
Confidence 35999999999999999999999999999999999999999999996 77999 888776 4589999999
Q ss_pred HHHHHHHHHhhcCccccC--CCCCCcceeeeccceeEEEECCCCcchhchHHHHHHHHhcCCEEEEeCCCCChhHHHHHH
Q 001665 307 VEQACAVATLQIGEFVPN--ALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILA 384 (1035)
Q Consensus 307 l~~~~~~a~~~~g~~~~~--~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~ALaaGNaVVlKPS~~ap~ta~~L~ 384 (1035)
++++++.. ...+...+. ...+...+++++|+|||++|+||| |+.++ +++++||++||+||+|||+.+|.++..|+
T Consensus 374 ~~~~a~~~-~~~g~~~~~~~~~~~~~~~~~r~PlGVV~~I~Pwn-P~~~~-~kiapALaaGNtVVlKPse~tp~s~~~l~ 450 (718)
T PLN02418 374 IRQLADME-DPIGRVLKRTEVADGLVLEKTSCPLGVLLIIFESR-PDALV-QIASLAIRSGNGLLLKGGKEAARSNAILH 450 (718)
T ss_pred HHHHhcCc-cccCccccccccCCCceEEEEEEeeeEEEEEeCCC-cHHHH-HHHHHHHHhCCEEEEeCCccchHHHHHHH
Confidence 99998763 333433321 112334678899999999999999 99998 89999999999999999999999999999
Q ss_pred HHHHHhCCCCCc----EEEeecchhhHhhhhcCCCccEEEEeccchHHHHHHHHHHhcCCceeecCCCcceEEEcCCCCH
Q 001665 385 ALAMEAGLPDGV----LNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMPDASI 460 (1035)
Q Consensus 385 ell~eAGlP~gv----v~vV~g~~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~l~Pv~lElGGknp~IV~~dADl 460 (1035)
+++.++ +|+|+ +|+|+|+.+.+..|..|++|++|+||||+. .+++.++.+++|+++|||||+|+||++|||+
T Consensus 451 ~l~~eA-lP~gv~~~v~nvv~g~~~~g~~L~~~~~v~~V~FTGSt~---~i~~~aa~~~k~v~lELGGk~p~iV~~DADl 526 (718)
T PLN02418 451 KVITDA-IPKTVGGKLIGLVTSRDEIPDLLKLDDVIDLVIPRGSNK---LVSQIKASTKIPVLGHADGICHVYVDKSADM 526 (718)
T ss_pred HHHHHH-ccccCCcceEEEeCCcHHHHHHHhhCCCCCEEEEeCCHH---HHHHHHHhcCCCEEEeCCCcceEEEeCCCCH
Confidence 999999 99996 999998667788999999999999999995 4566677789999999999999999999999
Q ss_pred HHHHHHHHHHHhccCCCCccCCceEEEeCccHHHHHHHHHHHHhcccccCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCC
Q 001665 461 DATLNALVSAGFGAAGERCTALSTAVFVGSSVQWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNG 540 (1035)
Q Consensus 461 d~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~~f~e~Lv~~~~~lkvG~p~d~~~~~Gpli~~~~~~rl~~~i~~av~~G 540 (1035)
+.|++.+++++|.| ||.|++.+|+|||+++++ + | .+.++|++|+++|
T Consensus 527 d~A~~~i~~~~~~n-GQ~C~a~~RllVh~~i~d---~--------------------G---------~~~~~i~~a~~~G 573 (718)
T PLN02418 527 DMAKRIVVDAKTDY-PAACNAMETLLVHKDLVQ---N--------------------G---------GLNDLLVALRSAG 573 (718)
T ss_pred HHHHHHHHHHhCCC-CCccccCcEEEEeccccc---c--------------------c---------cHHHHHHHHHHCC
Confidence 99999999999999 999999999999999872 1 2 3589999999999
Q ss_pred CcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecCCHHHHHHHHHhcCCCcEEEEEcCCHHHHH
Q 001665 541 ASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAAR 620 (1035)
Q Consensus 541 Akvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI~laN~~~~GLsasVfS~d~~~a~ 620 (1035)
|++ +||... .| +|. + ++|.+++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.+.
T Consensus 574 a~l-~Gg~~~------~g------~l~-~-~~~~i~~eE~FgPv~~i~~~~~~dEAI~~aN~s~yGLsa~V~T~d~~~a~ 638 (718)
T PLN02418 574 VTL-YGGPRA------SK------LLN-I-PEAQSFHHEYSSLACTVEIVDDVHAAIDHIHRHGSAHTDCIVTEDSEVAE 638 (718)
T ss_pred CEE-ECCccc------cC------eeC-C-CCchhhhCCcCCeeEEEEEECCHHHHHHHHhcCCCCCeeEEEcCCHHHHH
Confidence 999 677531 13 233 4 78999999999999999999999999999999999999999999999999
Q ss_pred HHHhccceeEEEEcCCcC----CCCCCCCCCCC--CCcC--cHHHHHhcceeeEEEEe
Q 001665 621 KFQNEIEARLVGINVPVP----SSFSSINESGE--FNFC--GKSGVQFYTQIKTVAQQ 670 (1035)
Q Consensus 621 ~~a~~l~sG~V~IN~~~~----~PfGG~g~SG~--G~~~--G~~g~~~ft~~k~v~~~ 670 (1035)
++++++++|.|+||.+.. .||||+|.||+ |+++ |.+|+++|++.|+|+.-
T Consensus 639 ~~a~~l~aG~V~IN~~~~~~~~~PfGG~k~SG~stGr~~~~G~~gl~~~t~~K~v~~g 696 (718)
T PLN02418 639 IFLRQVDSAAVFHNASTRFSDGARFGLGAEVGISTGRIHARGPVGVEGLLTTRWILRG 696 (718)
T ss_pred HHHHhCCeeEEEEeCCCCCCCCCCCCCcccccccCCcCCCCCHHHHHHHhcEEEEEEC
Confidence 999999999999998632 79999999999 9875 99999999999999763
|
|
| >COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-64 Score=564.75 Aligned_cols=446 Identities=25% Similarity=0.369 Sum_probs=401.0
Q ss_pred ccceEEcCEEecCCCCCeEEeecCCC-CCeEEEecCCCHHHHHHHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHHhHH
Q 001665 201 RVSNFIGGKFVDLRGSATIDVINPAT-QEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDID 279 (1035)
Q Consensus 201 ~~~~~I~G~~~~~~~~~~~~v~nP~t-Gevi~~v~~~s~~dv~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e 279 (1035)
.-...++|+.+. .|+..+|+||++ .++++.|..++.+++++|++.|..|+..|..++.++|+.+|++++++++.+..
T Consensus 113 ~A~p~~~~~~~~--~g~~~pV~nPad~~dvVG~V~ea~~~~v~~A~~~A~~a~p~W~atp~~eRAaiL~raAdlme~~m~ 190 (769)
T COG4230 113 QAAPIVNGAPVA--GGEPRPVINPADPDDIVGTVTEATEADVEQALEAAVAAAPIWSATPPAERAAILERAADLMEAQMP 190 (769)
T ss_pred ccccccCCCcCC--CCCcccccCCCCHhHCeeeeeecCHHHHHHHHHHHHhhCcccccCCHHHHHHHHHHHHHHHHHHHH
Confidence 334577887765 356799999998 57899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCccccCCCCCCcceeeeccceeEEEECCCCcchhchHHHHH
Q 001665 280 KLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFS 359 (1035)
Q Consensus 280 ~La~~i~~etGk~~~eA~~EV~~a~~~l~~~~~~a~~~~g~~~~~~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~ 359 (1035)
+|..++++|-||++..+..||.+++++|+||+..++...+. ..++|+|.|++|+|||||+.++..+++
T Consensus 191 ~L~~L~~REAGKtl~naIAEVREAVDFlrYYA~~ar~~~g~------------~~~~~~G~vVcISPWNFPLAIFtGqia 258 (769)
T COG4230 191 QLMGLLVREAGKTLSNAIAEVREAVDFLRYYAGQARDTFGN------------LTHRPLGPVVCISPWNFPLAIFTGQIA 258 (769)
T ss_pred HHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhcccCc------------cccCCCCcEEEECCCCchHHHHHhHHH
Confidence 99999999999999999999999999999999877653321 347899999999999999999999999
Q ss_pred HHHhcCCEEEEeCCCCChhHHHHHHHHHHHhCCCCCcEEEeecchh-hHhhhhcCCCccEEEEeccchHHHHHHHHHHhc
Q 001665 360 IAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGTND-VINHICDDEDIKAISFVASSTASVQMYARAAAR 438 (1035)
Q Consensus 360 ~ALaaGNaVVlKPS~~ap~ta~~L~ell~eAGlP~gvv~vV~g~~e-~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~ 438 (1035)
.||++||+|+-||.|++|+.+..-++++.++|+|++++|+++|+++ ++.+|..++++++|+||||+++++.|.+..+++
T Consensus 259 AAL~aGN~VlAKPAEqTpLIAa~aV~ll~eAGvP~~~lqLLpG~G~tvGa~L~~darv~GV~FTGSTevA~li~~~LA~r 338 (769)
T COG4230 259 AALAAGNSVLAKPAEQTPLIAAQAVRLLHEAGVPPGVLQLLPGRGETVGAALTADARVAGVMFTGSTEVARLIQRQLAKR 338 (769)
T ss_pred HHHHcCCccccCccccccHHHHHHHHHHHHcCCChhhHHhcCCCCcccchhhhcCcccceEEEeCcHHHHHHHHHHHhhc
Confidence 9999999999999999999999999999999999999999999875 899999999999999999999999999988873
Q ss_pred ---CCceeecCCCcceEEEcCCCCHHHHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHhcccccCCCCC
Q 001665 439 ---GKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDAS 514 (1035)
Q Consensus 439 ---l~Pv~lElGGknp~IV~~dADld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d~~ 514 (1035)
..|++.|.||-|+||||.+|--|.++..++.|+|..+||+|++...+++.+++. ..++.|+-.+.++++|+|..-.
T Consensus 339 ~g~~~pLIAETGGqNAMIVDSsAL~EQVv~Dvl~SAFdSAGQRCSALRvLclQ~DvAd~~l~mLKGAm~el~~G~p~~l~ 418 (769)
T COG4230 339 QGRPIPLIAETGGQNAMIVDSSALAEQVVADVLASAFDSAGQRCSALRVLCLQEDVADRILTMLKGAMAELRVGNPDRLT 418 (769)
T ss_pred CCCCCceEeccCCcceEEeechhhHHHHHHHHHHHHhhcccchhhhhhhhhhhhhHHHHHHHHHHHHHHHhccCCcccee
Confidence 468899999999999999999999999999999999999999999877777777 7888888899999999999999
Q ss_pred CCcCCCcCHHHHHHHHHHHHHHHHCCCcEeeCCcccccCCC-CCCceeeceEEecCCCCCccccccccCcceeEEecC--
Q 001665 515 ADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGY-ENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQAD-- 591 (1035)
Q Consensus 515 ~~~Gpli~~~~~~rl~~~i~~av~~GAkvl~gG~~~~~p~~-~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~-- 591 (1035)
+|+||+|+.+..+.|.++|+..+..|-++..-.. +.. .+|.|+.||++.-. ...-++.|+|||||.|++|+
T Consensus 419 tDVGPVIdaEAk~~i~~Hi~~mr~~gr~v~q~~~----~~~~q~GtFv~Ptl~El~--~~~eL~rEVFGPVLHVvRy~~~ 492 (769)
T COG4230 419 TDVGPVIDAEAKANIEKHIQTMRSKGRLVHQAAA----PNSLQKGTFVAPTLIELE--NLDELQREVFGPVLHVVRYKRD 492 (769)
T ss_pred ccccccccHHHHHHHHHHHHHHHhcccchhhccC----CCccCCceeeCceeEEcC--CHHHHHHHhccceeEEEEecHH
Confidence 9999999999999999999998887755443322 222 47999999999633 33447889999999999995
Q ss_pred CHHHHHHHHHhcCCCcEEEEEcCCHHHHHHHHhccceeEEEEcCCcC------CCCCCCCCCCCC-CcCcHHHHHhccee
Q 001665 592 SLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPVP------SSFSSINESGEF-NFCGKSGVQFYTQI 664 (1035)
Q Consensus 592 d~eeAI~laN~~~~GLsasVfS~d~~~a~~~a~~l~sG~V~IN~~~~------~PfGG~g~SG~G-~~~G~~g~~~ft~~ 664 (1035)
++++.|+-+|.++|||+.+|||+.++.+..+..++++|.+|||.... .||||-|.||.| .-||..-+.-|...
T Consensus 493 ~l~~vi~~INatGyGLT~GvHtRideti~~v~~~~~aGNlYVNRN~vGAVVGVQPFGG~GLSGTGPKAGGp~YL~Rl~~~ 572 (769)
T COG4230 493 ELDEVIDQINATGYGLTLGVHTRIDETIAHVTERAHAGNLYVNRNIVGAVVGVQPFGGEGLSGTGPKAGGPLYLLRLVSE 572 (769)
T ss_pred HHHHHHHHHhccCcceeeeeecchHHHHHHHHhhccccceEeeccceeeEEeeccCCCCCCCCCCCCCCChHHHHHHHhc
Confidence 78999999999999999999999999999999999999999997632 899999999998 56787777777655
Q ss_pred eE
Q 001665 665 KT 666 (1035)
Q Consensus 665 k~ 666 (1035)
+.
T Consensus 573 ~p 574 (769)
T COG4230 573 RP 574 (769)
T ss_pred CC
Confidence 54
|
|
| >cd07077 ALDH-like NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-62 Score=565.47 Aligned_cols=367 Identities=15% Similarity=0.129 Sum_probs=326.4
Q ss_pred HHHHHhhHhhhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-----------HHHHHHHHHHHHHHHHH
Q 001665 246 DAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQ-----------RDVLFGLEVVEQACAVA 314 (1035)
Q Consensus 246 ~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e~La~~i~~etGk~~~eA~-----------~EV~~a~~~l~~~~~~a 314 (1035)
++|++||+.|+.++.++|.++|++++++|++++++|+++++.|+||++.++. .|+..+++.+++++...
T Consensus 1 ~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~~~~~~~~~~~~~~~ev~~~~~~~~~~a~~~ 80 (397)
T cd07077 1 ESAKNAQRTLAVNHDEQRDLIINAIANALYDTRQRLASEAVSERGAYIRSLIANWIAMMGCSESKLYKNIDTERGITASV 80 (397)
T ss_pred ChHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHhCCcHHHHHHHHHHHHHHHHhc
Confidence 3689999999999999999999999999999999999999999999865432 37888888888877654
Q ss_pred HhhcCccccCCCCCCcceeeeccceeEEEECCCCcchhchHHHHHHHHhcCCEEEEeCCCCChhHHHHHHHHHHHh---C
Q 001665 315 TLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEA---G 391 (1035)
Q Consensus 315 ~~~~g~~~~~~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~ALaaGNaVVlKPS~~ap~ta~~L~ell~eA---G 391 (1035)
....+...+. ....+++++|+|||++|+|||||+. +++++++||++||+||+|||+.+|.++.+|++++.++ |
T Consensus 81 ~~~~~~~~~~---~~~~~~~~~P~Gvv~~i~p~N~P~~-~~~~~~~aL~aGN~vilKps~~~p~~~~~l~~~~~~~~~~g 156 (397)
T cd07077 81 GHIQDVLLPD---NGETYVRAFPIGVTMHILPSTNPLS-GITSALRGIATRNQCIFRPHPSAPFTNRALALLFQAADAAH 156 (397)
T ss_pred CcccceEecC---CCceEEEEecceEEEEEeCCCCchH-HHHHHHHHHHcCCcEEEEcCcchhhHHHHHHHHHHHHhhcC
Confidence 3333332221 2356889999999999999999999 9999999999999999999999999999999999987 9
Q ss_pred CCCCcEEEeec-chhhHhhhhcCCCccEEEEeccchHHHHHHHHHHhcCCceeecCCCcceEEEcCCCCHHHHHHHHHHH
Q 001665 392 LPDGVLNIVHG-TNDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSA 470 (1035)
Q Consensus 392 lP~gvv~vV~g-~~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~l~Pv~lElGGknp~IV~~dADld~Aa~~Iv~s 470 (1035)
+|+++|++|++ +.+.+..|+.|+++|+|+||||+.+++.+++.+. ++|+++|+||++++||++|||++.|++.++++
T Consensus 157 ~p~~~v~~v~~~~~~~~~~l~~~~~vd~v~ftGs~~~~~~v~~~~~--~~~~~~~~gg~~~~iv~~dad~~~a~~~~~~~ 234 (397)
T cd07077 157 GPKILVLYVPHPSDELAEELLSHPKIDLIVATGGRDAVDAAVKHSP--HIPVIGFGAGNSPVVVDETADEERASGSVHDS 234 (397)
T ss_pred CCCceEEEecCCCHHHHHHHHcCCCCCEEEecCCHHHHHHHHHcCC--CCceEEecCCcceEEEcCCCCHHHHHHHHHHh
Confidence 99999999997 5578899999999999999999999999988763 79999999999999999999999999999999
Q ss_pred HhccCCCCccCCceEEEeCccH-HHHHHHHHHHHhcccccCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCcEeeCCcc
Q 001665 471 GFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRN 549 (1035)
Q Consensus 471 ~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d~~~~~Gpli~~~~~~rl~~~i~~av~~GAkvl~gG~~ 549 (1035)
+|+| ||.|+++++|||+++++ +|+++|+++++. +|++++.||.
T Consensus 235 ~~~~-GQ~C~a~~~v~V~~~i~d~~~~~l~~~~~~----------------------------------~G~~~~~g~~- 278 (397)
T cd07077 235 KFFD-QNACASEQNLYVVDDVLDPLYEEFKLKLVV----------------------------------EGLKVPQETK- 278 (397)
T ss_pred hccC-CccCCCCeEEEEehhhhHHHHHHHHHHHHh----------------------------------cCcCcCCCce-
Confidence 9999 99999999999999998 888888877743 5677776653
Q ss_pred cccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecCCHH----HHHHHHHhcCCCcEEEEEcCCHHHHHHHHhc
Q 001665 550 IVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLE----EAIKMVNRNRFVNGASIFTSSGLAARKFQNE 625 (1035)
Q Consensus 550 ~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~e----eAI~laN~~~~GLsasVfS~d~~~a~~~a~~ 625 (1035)
+.|+.|| +++.++.||+||||++|++|+|++ +|++++|+.+|||+++|||+|.+.+.+++++
T Consensus 279 --------~~~~~pt------~~~~~~~~E~FgPvl~v~~~~~~~eai~~ai~~~n~~~~gl~~~Ift~d~~~~~~~~~~ 344 (397)
T cd07077 279 --------PLSKETT------PSFDDEALESMTPLECQFRVLDVISAVENAWMIIESGGGPHTRCVYTHKINKVDDFVQY 344 (397)
T ss_pred --------eeEEecc------CCCChhhhhhhCceeEEEEEcchHHHHHHHHHHHHhcCCCCceEEEeCCHHHHHHHHHh
Confidence 4677776 688999999999999999999996 6667889999999999999999999999999
Q ss_pred cceeEEEEcCCcC------CCCCCCC--CCCCCCcCc-HHHHHhcceeeEEE
Q 001665 626 IEARLVGINVPVP------SSFSSIN--ESGEFNFCG-KSGVQFYTQIKTVA 668 (1035)
Q Consensus 626 l~sG~V~IN~~~~------~PfGG~g--~SG~G~~~G-~~g~~~ft~~k~v~ 668 (1035)
+++|.|+||+... .||||++ .||+|+++| .+|+++|++.|+++
T Consensus 345 l~~G~v~vN~~~~~~~~~~~~~gg~~~~~SG~g~~~g~~~~~~~~~~~k~v~ 396 (397)
T cd07077 345 IDTASFYPNESSKKGRGAFAGKGVERIVTSGMNNIFGAGVGHDALRPLKRLV 396 (397)
T ss_pred CCEEEEEEeCCccCCCccccCCCcceEEEccccCCCCCCCChHHhcceeEee
Confidence 9999999998632 7899999 899999999 99999999999875
|
The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. |
| >cd06534 ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase superfamily | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-60 Score=547.60 Aligned_cols=358 Identities=35% Similarity=0.483 Sum_probs=332.2
Q ss_pred HHHHhhHhhhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCccccCCC
Q 001665 247 AAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVPNAL 326 (1035)
Q Consensus 247 ~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e~La~~i~~etGk~~~eA~~EV~~a~~~l~~~~~~a~~~~g~~~~~~~ 326 (1035)
+|++||+.|+.++.++|.++|+++++.|.++.++|+++++.|+||++.+++.|+..+++.+++++.......+.......
T Consensus 2 ~a~~a~~~w~~~~~~~R~~~l~~l~~~l~~~~~~l~~~~~~e~Gk~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~ 81 (367)
T cd06534 2 AARAAFKAWAALPPAERAAILRKIADLLEERREELAALETLETGKPIEEALGEVARAIDTFRYAAGLADKLGGPELPSPD 81 (367)
T ss_pred hHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccC
Confidence 68899999999999999999999999999999999999999999999999999999999999998877665543333334
Q ss_pred CCCcceeeeccceeEEEECCCCcchhchHHHHHHHHhcCCEEEEeCCCCChhHHHHHHHHHHHhCCCCCcEEEeecch-h
Q 001665 327 CGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGTN-D 405 (1035)
Q Consensus 327 ~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~ALaaGNaVVlKPS~~ap~ta~~L~ell~eAGlP~gvv~vV~g~~-e 405 (1035)
.+...+.+++|+|||++|.|||||+...++.+++||++||+||+|||+.+|.++..|+++|.++|+|++++++++|+. +
T Consensus 82 ~~~~~~~~~~p~Gvv~~i~p~n~p~~~~~~~~~~aL~~GN~vilk~s~~~~~~~~~l~~~l~~ag~p~~~v~~~~~~~~~ 161 (367)
T cd06534 82 PGGEAYVRREPLGVVGVITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALALAELLQEAGLPPGVVNVVPGGGDE 161 (367)
T ss_pred CCceeEEEEEeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHhcCCCcCeEEEEEcCchh
Confidence 566778899999999999999999999999999999999999999999999999999999999999999999999966 4
Q ss_pred hHhhhhcCCCccEEEEeccchHHHHHHHHHHhcCCceeecCCCcceEEEcCCCCHHHHHHHHHHHHhccCCCCccCCceE
Q 001665 406 VINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTA 485 (1035)
Q Consensus 406 ~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~l~Pv~lElGGknp~IV~~dADld~Aa~~Iv~s~f~naGQ~C~a~~~v 485 (1035)
.+.+|+.|+++|.|+||||.++++.|.+.++++++|+++|+||+|++||++|||++.|++.|++++|+++||.|+++++|
T Consensus 162 ~~~~l~~~~~vd~v~~tGs~~~~~~v~~~~~~~~~~~~~e~~g~~~~iV~~~ad~~~aa~~i~~~~~~~~gq~C~s~~~v 241 (367)
T cd06534 162 VGAALLSHPRVDKISFTGSTAVGKAIMKAAAENLKPVTLELGGKSPVIVDEDADLDAAVEGAVFGAFFNAGQICTAASRL 241 (367)
T ss_pred HHHHHhcCCCcCEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEE
Confidence 88899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCccH-HHHHHHHHHHHhcccccCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCcEeeCCcccccCCCCCCceeece
Q 001665 486 VFVGSSV-QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPT 564 (1035)
Q Consensus 486 lV~~~i~-~f~e~Lv~~~~~lkvG~p~d~~~~~Gpli~~~~~~rl~~~i~~av~~GAkvl~gG~~~~~p~~~~g~fv~PT 564 (1035)
||+++++ +|+++|+ |
T Consensus 242 ~v~~~~~~~f~~~l~----------------------------------------------------------------t 257 (367)
T cd06534 242 LVHESIYDEFVEKLV----------------------------------------------------------------T 257 (367)
T ss_pred EEcHHHHHHHHHhhc----------------------------------------------------------------e
Confidence 9998876 4555444 5
Q ss_pred EEecCCCCCccccccccCcceeEEecCCHHHHHHHHHhcCCCcEEEEEcCCHHHHHHHHhccceeEEEEcCCc-----CC
Q 001665 565 ILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPV-----PS 639 (1035)
Q Consensus 565 Il~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI~laN~~~~GLsasVfS~d~~~a~~~a~~l~sG~V~IN~~~-----~~ 639 (1035)
|+.+++++++++.||+||||++|++|++++|||+++|+.++||++||||+|...+++++..+++|.|+||+.. .+
T Consensus 258 l~~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~ 337 (367)
T cd06534 258 VLVDVDPDMPIAQEEIFGPVLPVIRFKDEEEAIALANDTEYGLTAGVFTRDLNRALRVAERLRAGTVYINDSSIGVGPEA 337 (367)
T ss_pred eeeCCCCCCccccCCccCceEEEEecCCHHHHHHHHhCCCCCCeEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCC
Confidence 6667788899999999999999999999999999999999999999999999999999999999999999863 28
Q ss_pred CCCCCCCCCCCCcCcHHHHHhcceeeEEE
Q 001665 640 SFSSINESGEFNFCGKSGVQFYTQIKTVA 668 (1035)
Q Consensus 640 PfGG~g~SG~G~~~G~~g~~~ft~~k~v~ 668 (1035)
||||++.||+|+++|.+++++|++.|++.
T Consensus 338 pfgg~~~sG~g~~~g~~~~~~~~~~k~i~ 366 (367)
T cd06534 338 PFGGVKNSGIGREGGPYGLEEYTRTKTVV 366 (367)
T ss_pred CCCCcccCccCCCChHHHHHHhceEEEEe
Confidence 99999999999999999999999999874
|
The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydri |
| >TIGR01092 P5CS delta l-pyrroline-5-carboxylate synthetase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-60 Score=586.38 Aligned_cols=374 Identities=18% Similarity=0.186 Sum_probs=317.0
Q ss_pred HHHHHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHH----------------HHHHH
Q 001665 240 EFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQR----------------DVLFG 303 (1035)
Q Consensus 240 dv~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e~La~~i~~etGk~~~eA~~----------------EV~~a 303 (1035)
+++.++++|++||+.|+.++.++|.++|++++++|+++.++|+ .++||++.+++. |+..+
T Consensus 287 ~~~~~~~~A~~A~~~w~~~~~~~R~~~L~~la~~l~~~~eei~----~e~gkdl~~a~~~~~~~~~~~el~~~~~ei~~~ 362 (715)
T TIGR01092 287 GERDMAVAARESSRMLQALSSEQRKEILHDIADALEDNEDEIL----AENKKDVAAAQGAGYAASLVARLSMSPSKISSL 362 (715)
T ss_pred HHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHHH----HHHhhhHHHHHhcCcchhHHHHHhCCHHHHHHH
Confidence 4888999999999999999999999999999999999999986 578888877654 36667
Q ss_pred HHHHHHHHHHHHhhcCccccC--CCCCCcceeeeccceeEEEECCCCcchhchHHHHHHHHhcCCEEEEeCCCCChhHHH
Q 001665 304 LEVVEQACAVATLQIGEFVPN--ALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSM 381 (1035)
Q Consensus 304 ~~~l~~~~~~a~~~~g~~~~~--~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~ALaaGNaVVlKPS~~ap~ta~ 381 (1035)
+..++++++. ....+...+. ...+...+.+++|+|||++|+||| |+.+ ++++++||++||+||+|||+.+|.++.
T Consensus 363 ~~~l~~~a~~-~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN-P~~~-~~~~~~ALaaGN~vvlKpse~tp~t~~ 439 (715)
T TIGR01092 363 AISLRQLAAM-EDPIGRVLKRTRIADNLILEKTSVPIGVLLIVFESR-PDAL-VQIASLAIRSGNGLLLKGGKEAARSNA 439 (715)
T ss_pred HHHHHHHhcC-CCcccccccccccCCCceeEEEEeeceEEEEEeCCC-hHHH-HHHHHHHHHhCCEEEEcCcccchHHHH
Confidence 7777777652 2222222211 112333567899999999999999 9999 589999999999999999999999999
Q ss_pred HHHHHHHHhCCCCC----cEEEeecchhhHhhhhcCCCccEEEEeccchHHHHHHHHHHhcCCceeecCCCcceEEEcCC
Q 001665 382 ILAALAMEAGLPDG----VLNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMPD 457 (1035)
Q Consensus 382 ~L~ell~eAGlP~g----vv~vV~g~~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~l~Pv~lElGGknp~IV~~d 457 (1035)
+|++++.++ ||+| ++++|++..+.+..|..|++||+|+||||+.+|+.|+++|+ +|+++|+|||+|+||++|
T Consensus 440 ~l~~l~~~a-lp~g~~~~~~~~v~~~~~~~~~l~~~~~vd~I~fTGS~~vG~~i~~~A~---~pv~lElgGk~p~iV~~d 515 (715)
T TIGR01092 440 ILHKVITEA-IPIHVGKKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKKSTK---IPVLGHADGICHVYVDKS 515 (715)
T ss_pred HHHHHHHHH-cCCCCCCcEEEEeCChHHHHHHHhcCCCccEEEEcCCHHHHHHHHHhCC---CCEEEEcCCcceEEECCC
Confidence 999999999 9987 68999864566778888999999999999999999998864 999999999999999999
Q ss_pred CCHHHHHHHHHHHHhccCCCCccCCceEEEeCccHHHHHHHHHHHHhcccccCCCCCCCcCCCcCHHHHHHHHHHHHHHH
Q 001665 458 ASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAV 537 (1035)
Q Consensus 458 ADld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~~f~e~Lv~~~~~lkvG~p~d~~~~~Gpli~~~~~~rl~~~i~~av 537 (1035)
||++.|++.++.++| ++||.|+|+++||||+++++ + + .+.++++.++
T Consensus 516 ADl~~A~~~i~~~~~-~~GQ~C~a~~rvlV~~~i~d---~---------------------~--------~~~~~v~~~~ 562 (715)
T TIGR01092 516 ASVDMAKRIVRDAKC-DYPAACNAMETLLVHKDLLR---N---------------------G--------LLDDLIDMLR 562 (715)
T ss_pred CCHHHHHHHHHHHhC-CCCCccccCcEEEEehhhcc---c---------------------h--------hHHHHHHHHH
Confidence 999999866655655 55999999999999998762 0 0 2667888888
Q ss_pred HCCCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecCCHHHHHHHHHhcCCCcEEEEEcCCHH
Q 001665 538 DNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGL 617 (1035)
Q Consensus 538 ~~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI~laN~~~~GLsasVfS~d~~ 617 (1035)
++|++++ ||... . .|+. ..+++|.+++||+|||||+|++|+|++|||+++|+.+|||++||||+|.+
T Consensus 563 ~~Ga~l~-Gg~~~------~-~~~~-----~~~~~~~i~~eE~FGPvl~v~~~~~~deAi~~~N~~~~gLa~~ift~d~~ 629 (715)
T TIGR01092 563 TEGVTIH-GGPRF------A-AYLT-----FNISETKSFRTEYSSLACTVEIVDDVYDAIDHIHKHGSAHTDCIVTEDEN 629 (715)
T ss_pred HCCCEEE-CCcch------h-heec-----cCCCCchhhhccccCceEEEEEECCHHHHHHHHHcCCCCCeEEEEeCCHH
Confidence 8999985 76531 1 2332 13568999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhccceeEEEEcCCcC----CCCCCCCCCCCCC----cCcHHHHHhcceeeEEEEe
Q 001665 618 AARKFQNEIEARLVGINVPVP----SSFSSINESGEFN----FCGKSGVQFYTQIKTVAQQ 670 (1035)
Q Consensus 618 ~a~~~a~~l~sG~V~IN~~~~----~PfGG~g~SG~G~----~~G~~g~~~ft~~k~v~~~ 670 (1035)
.+++|++++++|.|+||.+.. +||||++.||+|+ ++|.+++++|++.|+|...
T Consensus 630 ~a~~~~~~i~sG~V~vN~~~~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~~g 690 (715)
T TIGR01092 630 VAEFFLQHVDSAAVFHNASTRFSDGFRFGLGAEVGISTSRIHARGPVGVEGLLTTRWLLRG 690 (715)
T ss_pred HHHHHHHhCCeeEEEEeCCCCCCCCCCCcCccccccccCCCCCCChhHHHHhceEEEEEEC
Confidence 999999999999999997632 7999999999995 4899999999999998764
|
This protein contains a glutamate 5-kinase (ProB, EC 2.7.2.11) region followed by a gamma-glutamyl phosphate reductase (ProA, EC 1.2.1.41) region. |
| >TIGR00407 proA gamma-glutamyl phosphate reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-60 Score=549.04 Aligned_cols=369 Identities=19% Similarity=0.197 Sum_probs=311.9
Q ss_pred HHHhhHhhhCCCHHHHHHHHHHHHHHHHHhHHHHHHH------HHHHhCCCH------HHHHHHHHHHHHHHHHHHHHHH
Q 001665 248 AKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMN------ITVEQGTTL------KAAQRDVLFGLEVVEQACAVAT 315 (1035)
Q Consensus 248 Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e~La~~------i~~etGk~~------~eA~~EV~~a~~~l~~~~~~a~ 315 (1035)
|++||+.|+.++.++|.++|++++++|+++.++|+++ ++.|+||+. .+++.|+..+++.++++++.+.
T Consensus 1 a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~a~~~E~Gk~~~~~~~l~~a~~ev~~~~~~~~~~a~~a~ 80 (398)
T TIGR00407 1 AKQAANILAQLSTAEKNDALSKIADGLEAQAPAILAANAKDIAVAKENGLADALLDRLLLTEGRLKGIADGVKDVIELAD 80 (398)
T ss_pred ChhHHHHHHhCCHHHHHHHHHHHHHHHHhChHHHHHHhHHHHHHHHHcCCCHHHHHHHcCCHHHHHHHHHHHHHHhcCCC
Confidence 5789999999999999999999999999999999999 999999994 3456789999999999887664
Q ss_pred hhcCccccC--CCCCCcceeeeccceeEEEECCCCcchhchHHHHHHHHhcCCEEEEeCCCCChhHHHHHHHH----HHH
Q 001665 316 LQIGEFVPN--ALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAAL----AME 389 (1035)
Q Consensus 316 ~~~g~~~~~--~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~ALaaGNaVVlKPS~~ap~ta~~L~el----l~e 389 (1035)
. .++..+. ...+...+++++|+|||++|+||| | ..+++++++||++||+||+|||+.+|.++..|+++ |.+
T Consensus 81 ~-~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~pw~-p-~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~~~al~e 157 (398)
T TIGR00407 81 P-VGKVIDGRELDSGLTLERVRVPLGVLGVIYEAR-P-NVTVDIASLCLKTGNAVILRGGKEAVRSNKALVEVIQDALAQ 157 (398)
T ss_pred C-CcccccceecCCCceEEEEEeCcEEEEEEeCCC-c-hHHHHHHHHHHHhCCeEEECCChhhHHHHHHHHHHHHHHHHH
Confidence 3 2433322 123556788999999999999996 6 66888999999999999999999999999999999 559
Q ss_pred hCCCCCcEEEeec-chh-hHhhhhcCCCccEEEEeccchHHHHHHHHHHhcCCceeecCCCcceEEEcCCCCHHHHHHHH
Q 001665 390 AGLPDGVLNIVHG-TND-VINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMPDASIDATLNAL 467 (1035)
Q Consensus 390 AGlP~gvv~vV~g-~~e-~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~l~Pv~lElGGknp~IV~~dADld~Aa~~I 467 (1035)
+|+|+|+||+|+| +.+ .+..|..|++|++|+||||+.+|+.+++. .++|+++|+|||+|+||++|||++.|++.+
T Consensus 158 aGlP~gvv~~v~g~~~~~~~~~l~~~~~v~~v~fTGs~~vg~~~~~~---~~~~~~~e~gGk~p~iV~~dADl~~Aa~~i 234 (398)
T TIGR00407 158 TGLPVGAVQLIETPSRELVSELLDLDEYIDLLIPRGGNGLVRLIKQT---STIPVLGHGDGICHIYLDESADLIKAIKVI 234 (398)
T ss_pred cCCChhHEEEecCCCHHHHHHHHhCCCCeeEEEecCCHHHHHHHHHh---CCCCEEEecCCcceEEEeCCCCHHHHHHHH
Confidence 9999999999997 444 67788889999999999999999988764 468999999999999999999999999999
Q ss_pred HHHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHhcccccCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCcEeeC
Q 001665 468 VSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLD 546 (1035)
Q Consensus 468 v~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d~~~~~Gpli~~~~~~rl~~~i~~av~~GAkvl~g 546 (1035)
++|+|++ ||.|++++++|||++++ +|+++|+++++++++. ++. .+.+.+++. +
T Consensus 235 v~~~~~~-GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~~~~~--------~~~------~~~i~~~v~-----------~ 288 (398)
T TIGR00407 235 VNAKTQR-PSTCNAIETLLVNKAIAREFLPVLENQLLEKGVT--------IHA------DAYALKLLE-----------L 288 (398)
T ss_pred HhhhcCC-CCcccccceEEEeHHHHHHHHHHHHHHHHhcCCE--------Eec------CHHHHHHHh-----------c
Confidence 9999975 99999999999999999 8999999998876432 211 133333332 1
Q ss_pred CcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecCCHHHHHHHHHhcCCCcEEEEEcCCHHHHHHHHhcc
Q 001665 547 GRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEI 626 (1035)
Q Consensus 547 G~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI~laN~~~~GLsasVfS~d~~~a~~~a~~l 626 (1035)
|. ||++ ++ ++.+++||+||||++|++|+|++|||+++|+.+|||++||||+|.+.+++|++++
T Consensus 289 g~--------------~tv~-~~--~~~i~~eE~FgPvl~v~~~~~~~eAi~~aN~~~~GL~a~I~t~d~~~a~~~a~~i 351 (398)
T TIGR00407 289 GP--------------ATEA-IV--CKTDFDKEFLSLDLSVKIVESLEAAIQHINQYGTQHSDAILTENKANAEQFQNGV 351 (398)
T ss_pred cC--------------cccc-cc--ccccccchhhCceeEEEEECCHHHHHHHHHHhCCCCceEEEeCCHHHHHHHHHhC
Confidence 11 2443 33 3789999999999999999999999999999999999999999999999999999
Q ss_pred ceeEEEEcCCcC----CCCCCCCC----CCCCCcCcHHHHHhcceee
Q 001665 627 EARLVGINVPVP----SSFSSINE----SGEFNFCGKSGVQFYTQIK 665 (1035)
Q Consensus 627 ~sG~V~IN~~~~----~PfGG~g~----SG~G~~~G~~g~~~ft~~k 665 (1035)
++|.|+||++.. .|||=-.+ +|.+.-.|..+++.|+..|
T Consensus 352 ~~G~v~iN~~~~~~~~~pfG~~~~~~~~~~~~~~rg~~~~~~~~~~~ 398 (398)
T TIGR00407 352 DSAAVYHNASTRFTDGFRFGFGAEVGISTQKLHARGPMGLEALTSYK 398 (398)
T ss_pred CeeEEEEeCCCCcCCCcccccceeeEEecCCCcCCCCcCHHHhcCCC
Confidence 999999998743 67772222 2556678999999988754
|
The prosite motif begins at residue 332 of the seed alignment although not all of the members of the family exactly obey the motif. |
| >KOG2455 consensus Delta-1-pyrroline-5-carboxylate dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-59 Score=511.79 Aligned_cols=467 Identities=24% Similarity=0.306 Sum_probs=403.5
Q ss_pred CCCCCCCccceEEcCEEecCCCCCeEEeecCCC-CCeEEEecCCCHHHHHHHHHHHHHhhHhhhCCCHHHHHHHHHHHHH
Q 001665 194 SPNIDNNRVSNFIGGKFVDLRGSATIDVINPAT-QEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQE 272 (1035)
Q Consensus 194 ~~~~~~~~~~~~I~G~~~~~~~~~~~~v~nP~t-Gevi~~v~~~s~~dv~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~ 272 (1035)
+..+.+..+|..|||+.+.+.. .....+|.+ +.+++.+..++.++|++|+++|..|++.|..+|+.+|.+|++++|+
T Consensus 52 ~~~~~~~evP~vIg~~~v~t~~--~q~q~~P~~hq~~lA~~~yA~~k~ie~AIkaAl~a~~~W~~~PiadR~aI~lkAAd 129 (561)
T KOG2455|consen 52 ELQKRPLEVPLVIGDKEVYTND--EQYQVCPHNHQHVLAKVYYATKKQIEKAIKAALSAQKTWELVPIADRLAIFLKAAD 129 (561)
T ss_pred HHhcCceeccEEECCeeeecCC--cccccCCchhhhhhhheeeccHHHHHHHHHHHHhhcCccccCcHHHHHHHHHHHHH
Confidence 3444578999999999998643 366678886 5789999999999999999999999999999999999999999999
Q ss_pred HHH-HhHHHHHHHHHHHhCCCHHHHHHH-HHHHHHHHHHHHHHHHhhcCccccCCCCCCcceeeeccc-eeEEEECCCCc
Q 001665 273 LIR-RDIDKLAMNITVEQGTTLKAAQRD-VLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPL-GVCAGICPFNF 349 (1035)
Q Consensus 273 ~L~-~~~e~La~~i~~etGk~~~eA~~E-V~~a~~~l~~~~~~a~~~~g~~~~~~~~g~~~~~~~ePl-GVV~iI~P~N~ 349 (1035)
+|+ +.+-+|.......+||+..+|+.+ +.+.++.+++.+..+..+..........+..+...++|+ |.|++|+||||
T Consensus 130 listkyr~~l~aatMlgqgKt~~qAeiDa~~eLidf~R~na~ya~eL~~~qpi~~~~~t~ns~~yRpleGFVaAisPFnf 209 (561)
T KOG2455|consen 130 LISTKYRYDLLAATMLGQGKTAIQAEIDAAAELIDFFRFNAKYASELYAQQPISQTKGTWNSMEYRPLEGFVAAISPFNF 209 (561)
T ss_pred HhcchHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHhHHHHHHhhhcCCccccCCCCcceeeccccceeEEecccce
Confidence 999 667778888899999999999866 677888888877766655443333334566666777786 99999999999
Q ss_pred chhchHHHHHHHHhcCCEEEEeCCCCChhHHHHHHHHHHHhCCCCCcEEEeecch-hhHhhhhcCCCccEEEEeccchHH
Q 001665 350 PDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGTN-DVINHICDDEDIKAISFVASSTAS 428 (1035)
Q Consensus 350 Pl~~~~~~l~~ALaaGNaVVlKPS~~ap~ta~~L~ell~eAGlP~gvv~vV~g~~-e~~~~L~~h~~vd~V~fTGS~~vG 428 (1035)
-....-...++|| +||+|++|||..+.++.+++.++|+|||||+|++|+|++++ ..++.+..++.+.++-||||+.+-
T Consensus 210 tAI~gnLa~aPaL-MGN~VLwkPS~ta~lssYii~~il~EAGlP~GvinFvPad~~~f~dtita~~hfaglnftgS~~~f 288 (561)
T KOG2455|consen 210 TAIGGNLAGAPAL-MGNVVLWKPSDTAALSSYIIYRILREAGLPPGVINFVPADGPLFGDTITASPHFAGLNFTGSVPTF 288 (561)
T ss_pred eeeccccccChhh-hcceeeecccchhHHHHHHHHHHHHHcCCCccceeeccCCCCeecceeccCcccceeeeecccHHH
Confidence 7766555566676 69999999999999999999999999999999999999965 678889999999999999999999
Q ss_pred HHHHHHHHhcC------CceeecCCCcceEEEcCCCCHHHHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHH
Q 001665 429 VQMYARAAARG------KRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVEL 501 (1035)
Q Consensus 429 ~~I~~aAa~~l------~Pv~lElGGknp~IV~~dADld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~ 501 (1035)
+.+++..+.+. .++++|+||||.-+|.++||++.++...++++|.++||.|++.+|++|.++.+ .+.++|.+.
T Consensus 289 k~lwk~V~~n~~~Y~~fPrlvgEcgGkNFHfVH~SA~VesvV~~TvrsAfey~GQkcsA~SRmYvp~s~wp~i~e~l~~~ 368 (561)
T KOG2455|consen 289 KHLWKKVGENVDNYRTFPRLVGECGGKNFHFVHASADVESVVSSTVRSAFEYQGQKCSACSRMYVPESLWPQIREELVEE 368 (561)
T ss_pred HHHHHHHHhhhhhhhcchhhhccCCCcceEEeccccchHHHHHHHHHHHHhhcccccchhhhcccchhhcHHHHHHHHHH
Confidence 99999887764 57899999999999999999999999999999999999999999999999887 788999999
Q ss_pred HHhcccccC-CCCCCCcCCCcCHHHHHHHHHHHHHHHHC-CCcEeeCCcccccCCCCCCceeeceEEecCCCCCcccccc
Q 001665 502 AKALKVNVG-TDASADVGPVVSVEVKDQISRLIQNAVDN-GASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEE 579 (1035)
Q Consensus 502 ~~~lkvG~p-~d~~~~~Gpli~~~~~~rl~~~i~~av~~-GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eE 579 (1035)
-+++++|+| .|..+.+|++|..+.|.|++++|+.|+.. ...+++||.- ++..|+|++|||+..-.|.+++|.||
T Consensus 369 ~~q~~igd~~~d~~~f~gavIh~~sF~rl~k~le~ak~~~~leiL~GGk~----DdS~G~FV~PTiv~~kdP~~pim~ee 444 (561)
T KOG2455|consen 369 HSQLKIGDPVIDFSTFIGAVIHDKSFARLKKVLEHAKKDPELEILAGGKC----DDSTGYFVEPTIVLSKDPKDPIMTEE 444 (561)
T ss_pred HhhcccCCccccccchhhhhccHHHHHHHHHHHHhhccCccceeeecCcc----cCCCCeeecceEEEccCCCcchhhhh
Confidence 999999997 67889999999999999999999999743 4678999974 35689999999999999999999999
Q ss_pred ccCcceeEEecCC--HHHHHHHHHh-cCCCcEEEEEcCCHHHHHHHHhcc--ceeEEEEcCCcC------CCCCCCCCCC
Q 001665 580 IFGPVLLNMQADS--LEEAIKMVNR-NRFVNGASIFTSSGLAARKFQNEI--EARLVGINVPVP------SSFSSINESG 648 (1035)
Q Consensus 580 iFGPVL~V~~~~d--~eeAI~laN~-~~~GLsasVfS~d~~~a~~~a~~l--~sG~V~IN~~~~------~PfGG~g~SG 648 (1035)
+|||||+|+.|+| ++|+++++.+ ++|||+.+||+.|.+.+.+..+.+ .+|..+||+-.. .||||-..||
T Consensus 445 ~fGPvLsVyvY~Dd~~~E~l~lv~~tt~YaLTGaiFaqd~~vv~~a~~~Lr~aAgNfYiNdKcTGsvvgqqpFGGaR~SG 524 (561)
T KOG2455|consen 445 IFGPVLSVYVYEDDKFDEVLKLVDNTTPYALTGAIFAQDREVVLHALDVLRMAAGNFYINDKCTGSVVGQQPFGGARLSG 524 (561)
T ss_pred ccCceeEEEEeccccHHHHHHHHhcCCcceeccccccccHHHHHHHHHHHHhhhcceEEccccccceeeccccCcccccC
Confidence 9999999999965 8999999865 799999999999999999988754 799999998532 8999999999
Q ss_pred CC-CcCcHHHHHhcceeeEE
Q 001665 649 EF-NFCGKSGVQFYTQIKTV 667 (1035)
Q Consensus 649 ~G-~~~G~~g~~~ft~~k~v 667 (1035)
.- ..||..-+.-|+..+++
T Consensus 525 TNDKaGgp~~l~RwtSp~~i 544 (561)
T KOG2455|consen 525 TNDKAGGPHYLLRWTSPLSI 544 (561)
T ss_pred CCCCCCCceEEEeecCcchh
Confidence 63 44555444444444443
|
|
| >KOG2453 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-59 Score=495.62 Aligned_cols=459 Identities=23% Similarity=0.386 Sum_probs=431.5
Q ss_pred EcCEEecCCCCCeEEeecCCCCCeEEEecCCCHHHHHHHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 001665 206 IGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNI 285 (1035)
Q Consensus 206 I~G~~~~~~~~~~~~v~nP~tGevi~~v~~~s~~dv~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e~La~~i 285 (1035)
..|+|-. +|+.++.++|++.++|+.|..++.+|.+.+++.|++|++.|...+...|.++++++.++|+...+-|.+++
T Consensus 24 y~gkw~a--~g~vv~t~~pann~pia~v~~asv~dye~~~k~a~ea~kiw~~vpapkrgeivrqigdalr~klq~lg~lv 101 (507)
T KOG2453|consen 24 YHGKWAA--SGQVVQTFAPANNSPIANVQNASVQDYEIAIKEAKEAYKIWCEVPAPKRGEIVRQIGDALRTKLQNLGKLV 101 (507)
T ss_pred eeeeecc--CCceeEeecCCCCChhHHHhhccHHHHHHHHHHHHHHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhhhh
Confidence 3458864 57899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCccccCCCCCCcceeeeccceeEEEECCCCcchhchHHHHHHHHhcC
Q 001665 286 TVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCG 365 (1035)
Q Consensus 286 ~~etGk~~~eA~~EV~~a~~~l~~~~~~a~~~~g~~~~~~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~ALaaG 365 (1035)
++|+||-+.|..+||.+-++.+.|+.++.+.+.+..++..-+|+.....+.|+|||++|+.+|||....-|.-+.|+.+|
T Consensus 102 slemgkilaegvgevqeyvdicdyavglsr~l~g~i~pserpghalleqwnplg~vgvitafnfpcavygwnnaiaMv~g 181 (507)
T KOG2453|consen 102 SLEMGKILAEGVGEVQEYVDICDYAVGLSRSLEGKIFPSERPGHALLEQWNPLGVVGVITAFNFPCAVYGWNNAIAMVCG 181 (507)
T ss_pred hhhhhhHhhhcchhHHHHHHHHHHhhhhhhhhCCcccCCCCCchhHHHhcCCcceEEEEEeccCCceeeccCchhhhhhc
Confidence 99999999999999999999999999999999988888877888888889999999999999999999999999999999
Q ss_pred CEEEEeCCCCChhHHH----HHHHHHHHhCCCCCcEEEeecchhhHhhhhcCCCccEEEEeccchHHHHHHHHHHhcCCc
Q 001665 366 NTFILKPSEKNPGTSM----ILAALAMEAGLPDGVLNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAARGKR 441 (1035)
Q Consensus 366 NaVVlKPS~~ap~ta~----~L~ell~eAGlP~gvv~vV~g~~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~l~P 441 (1035)
|+|++||++.+|+++. ++++.|.+..+|++......|..+.++++.++.++..+.||||+++|+.+.+...++..+
T Consensus 182 ncVvWKpApttpLtTiAvtklIaevL~qnnl~~aicsltcG~aDigrAaakdgRvnlvsftGssQvgKsvgq~vqarfgk 261 (507)
T KOG2453|consen 182 NCVVWKPAPTTPLTTIAVTKLIAEVLEQNNLPGAICSLTCGGADIGRAAAKDGRVNLVSFTGSSQVGKSVGQQVQARFGK 261 (507)
T ss_pred ceeEecCCCCcceeHHHHHHHHHHHHhccCCCcceeeecccchhhhhhccccCceeecccccchhhhhHHHHHHHHHhhh
Confidence 9999999999998874 555667777899999999999999999999999999999999999999999988888889
Q ss_pred eeecCCCcceEEEcCCCCHHHHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHhcccccCCCCCCCcCCC
Q 001665 442 VQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDASADVGPV 520 (1035)
Q Consensus 442 v~lElGGknp~IV~~dADld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d~~~~~Gpl 520 (1035)
..|||||+|+.||.+|||+..++...++++...+||+|+...|+++|++++ +++++|+...+++++|.|+|+++-+|||
T Consensus 262 ~llelggnnaiiv~edadl~lvvps~lfaavgtagqrctt~rrl~~hesvyd~vlerlkkayaq~~ignpld~ntl~gpl 341 (507)
T KOG2453|consen 262 LLLELGGNNAIIVNEDADLNLVVPSTLFAAVGTAGQRCTTTRRLIVHESVYDQVLERLKKAYAQFEIGNPLDSNTLIGPL 341 (507)
T ss_pred HHHhhcCCceEEEeccccceeeehHHHHHHhcccccchhhhhHHHhhHHHHHHHHHHHHHHHHheecCCcCCCCceeccc
Confidence 999999999999999999999999999999999999999999999999999 8999999999999999999999999999
Q ss_pred cCHHHHHHHHHHHHHHHHCCCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecCCHHHHHHHH
Q 001665 521 VSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMV 600 (1035)
Q Consensus 521 i~~~~~~rl~~~i~~av~~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI~la 600 (1035)
.+++.....+.-+++++++|.++++||..+ +..|+|++|||++ +.+|.++..+|.|+|||+|++|.+++||+.+-
T Consensus 342 ht~qav~~f~~~veeak~~ggki~yggkv~----er~gnfveptivt-l~hda~vv~~etfapilyvlkf~~~eea~ain 416 (507)
T KOG2453|consen 342 HTQQAVGKFKASVEEAKASGGKIEYGGKVL----ERDGNFVEPTIVT-LKHDAPVVLRETFAPILYVLKFSTLEEAIAIN 416 (507)
T ss_pred cCHHHHHHHHHHHHHHHhcCCeEEECCEee----ccCCCcccceEEE-ecCCcchhhhhhccceeeEEeccchhhhheec
Confidence 999999999999999999999999999864 3579999999997 89999999999999999999999999999999
Q ss_pred HhcCCCcEEEEEcCCHHHHHHHHh--ccceeEEEEcCCcC-----CCCCCCCCCCCCCcCcHHHHHhcceeeEEEEec
Q 001665 601 NRNRFVNGASIFTSSGLAARKFQN--EIEARLVGINVPVP-----SSFSSINESGEFNFCGKSGVQFYTQIKTVAQQW 671 (1035)
Q Consensus 601 N~~~~GLsasVfS~d~~~a~~~a~--~l~sG~V~IN~~~~-----~PfGG~g~SG~G~~~G~~g~~~ft~~k~v~~~~ 671 (1035)
|+.+.||+.+|||+|..++-+... .-++|.|.||-++. ..|||-+.+|.|++.|..+.+.|.++.++.+.+
T Consensus 417 nev~qglsssift~n~~nifrw~gpkgsdcgivnvniptsgaeiggafggek~tgggresgsdswkqymrrstctiny 494 (507)
T KOG2453|consen 417 NEVDQGLSSSIFTTNIQNIFRWMGPKGSDCGIVNVNIPTSGAEIGGAFGGEKETGGGRESGSDSWKQYMRRSTCTINY 494 (507)
T ss_pred cccccccchhhhhcCHHHHHhhhCCCCCccceEEecCCCCchhhcccccCccccCCCcccCchHHHHHHhhceeeeec
Confidence 999999999999999999888774 45899999998854 789999999999999999999999999988764
|
|
| >cd07080 ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC | Back alignment and domain information |
|---|
Probab=99.98 E-value=1e-29 Score=297.17 Aligned_cols=359 Identities=13% Similarity=0.126 Sum_probs=247.7
Q ss_pred HHHHHHHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHH----hHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHH--HH
Q 001665 238 YEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRR----DIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQ--AC 311 (1035)
Q Consensus 238 ~~dv~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~----~~e~La~~i~~etGk~~~eA~~EV~~a~~~l~~--~~ 311 (1035)
..++++.++..+.+.+....++.++..+++.++++.+.. .+.+..+.+..-+|.+....+..+......++. ..
T Consensus 4 ~~~~~~~~~~l~~~~~~~~~~~~~~iv~~l~~~~~~~~~~~~~~r~~~l~~l~~~~~~~~~~~~~a~~~l~~~~~r~~l~ 83 (422)
T cd07080 4 APDLDALIEELRLNRRALAALPVEEIVDFLDRAGKRLLDPDYPLRQQAERLLPTVTGYSEEMLREGLKRLMALFRRENLE 83 (422)
T ss_pred HHHHHHHHHHHHhhHHhHhcCCHHHHHHHHHHHHHHhcCCCchHHHHHHHhhhhccCCCHHHHHHHHHHHHHHcCHHHHH
Confidence 445556666555555556667777777777777766642 334445555566666644433332222222210 00
Q ss_pred HH-HHhhc-CccccCCCC-CCcceeeeccceeEEEECCCCcchhchHHHHHHHHhcCCEEEEeCCCCChhHHHHHHHHHH
Q 001665 312 AV-ATLQI-GEFVPNALC-GLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAM 388 (1035)
Q Consensus 312 ~~-a~~~~-g~~~~~~~~-g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~ALaaGNaVVlKPS~~ap~ta~~L~ell~ 388 (1035)
.. ..... ...+....+ +...++.++|+|||++|+|||||+ +.++.++.||++||+||+|||+.+|.++..|+++|.
T Consensus 84 ~~l~~el~~~~~Ld~w~~~~~~~~~~~~P~Gvv~~I~p~N~P~-l~~~s~~~aLlaGN~~ilKpS~~~p~~~~~l~~~l~ 162 (422)
T cd07080 84 RILERELGSPGILDEWVPPGRGGYIRAQPRGLVVHIIAGNVPL-LPVWSIVRGLLVKNVNLLKMSSSDPLTATALLRSLA 162 (422)
T ss_pred HHHHHhcCCcccccCCccCCCCCeeEEcCCceEEEEccCCccc-cHHHHHHHHHHhcCceEEECCCccchHHHHHHHHHH
Confidence 00 01111 111112222 456678899999999999999999 789999999999999999999999999999999999
Q ss_pred HhCCCC----CcEEEee--cch-hhHhhhhcCCCccEEEEeccchHHHHHHHHHHhcCCceeecCCCc-ceEEEcCCC--
Q 001665 389 EAGLPD----GVLNIVH--GTN-DVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGK-NYAIIMPDA-- 458 (1035)
Q Consensus 389 eAGlP~----gvv~vV~--g~~-e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~l~Pv~lElGGk-np~IV~~dA-- 458 (1035)
++ +|+ +.++++. |+. +.+.+|+.++ |+|+||||.++|+.|++.++.+ +.++|+||| +++||+++|
T Consensus 163 ~~-~p~~~~~~~~~vv~~~g~~~~~~~~l~~~~--D~i~~~Gs~~~~~~i~~~a~~~--~~~Le~Ggk~s~~vi~~~a~~ 237 (422)
T cd07080 163 DV-DPNHPLTDSISVVYWPGGDAELEERILASA--DAVVAWGGEEAVKAIRSLLPPG--CRLIDFGPKYSFAVIDREALE 237 (422)
T ss_pred hc-CCCCcccceEEEEEecCCchHHHHHHHHhC--CEEEEeCCHHHHHHHHHhCCCC--CeeeecCCceeEEEecHHhhc
Confidence 99 787 8889984 544 4788899876 9999999999999999988754 679999999 556666668
Q ss_pred --CHHHHHHHHHHHHhccCCCCccCCceEEEeCcc---H-HHHHHHHHHHHhcccccCCCCCCCcCCCcCHHHHHHHHHH
Q 001665 459 --SIDATLNALVSAGFGAAGERCTALSTAVFVGSS---V-QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRL 532 (1035)
Q Consensus 459 --Dld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i---~-~f~e~Lv~~~~~lkvG~p~d~~~~~Gpli~~~~~~rl~~~ 532 (1035)
|++.+++.+++++|.++||.|+|+++|||+++. + +|.++|+++++++....|.. ++ +.....++...
T Consensus 238 ~~dl~~aa~~~a~~~~~~~gQ~C~sp~~v~V~~~~~~~~~~f~~~l~~~l~~~~~~~p~~------~~-~~~~~~~~~~~ 310 (422)
T cd07080 238 SEKLAEVADALAEDICRYDQQACSSPQVVFVEKDDDEELREFAEALAAALERLPRRYPAL------SL-SAAESAKIARA 310 (422)
T ss_pred cccHHHHHHHHHHHHHHHhhhhccCCeEEEEECCCCchHHHHHHHHHHHHHHHHHhCCCC------CC-CHHHHHHHHHH
Confidence 999999999999999999999999999999988 6 89999999888775444321 11 34444444443
Q ss_pred HHHHHHCCCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecCCHHHHHHHHHhcCCCcEEEEE
Q 001665 533 IQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIF 612 (1035)
Q Consensus 533 i~~av~~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI~laN~~~~GLsasVf 612 (1035)
-..+...+.+....+ ..+ -+|+..-. ..+.. ...+=.+.|+++++++|++..++. +--|+++|
T Consensus 311 r~~~~~~~~~~~~~~--------~~~----~~v~~~~~--~~~~~-~~~~r~v~v~~v~~l~~~l~~~~~--~lQTvg~~ 373 (422)
T cd07080 311 RLEAEFYELKGGVSR--------DLG----WTVIISDE--IGLEA-SPLNRTVNVKPVASLDDVLRPVTP--YLQTVGLA 373 (422)
T ss_pred HHHHHHHHHhcCCCC--------CCC----eEEEEeCC--CCccC-CCCcCEEEEEEcchHHHHHHhhhh--hcceeEee
Confidence 333322222211100 111 13333222 12211 445567889999999999999986 67799999
Q ss_pred cCCHHHHHHHHhccc
Q 001665 613 TSSGLAARKFQNEIE 627 (1035)
Q Consensus 613 S~d~~~a~~~a~~l~ 627 (1035)
..+.+. .++++.+.
T Consensus 374 ~~~~~~-~~~~~~l~ 387 (422)
T cd07080 374 PSPAEL-AELADALA 387 (422)
T ss_pred cChhhH-HHHHHHHH
Confidence 988776 66666654
|
Acyl-CoA reductase, LuxC, (EC=1.2.1.50) is the fatty acid reductase enzyme responsible for synthesis of the aldehyde substrate for the luminescent reaction catalyzed by luciferase. The fatty acid reductase, a luminescence-specific, multienzyme complex (LuxCDE), reduces myristic acid to generate the long chain fatty aldehyde required for the luciferase-catalyzed reaction resulting in the emission of blue-green light. Mutational studies of conserved cysteines of LuxC revealed that the cysteine which aligns with the catalytic cysteine conserved throughout the ALDH superfamily is the LuxC acylation site. This CD is composed of mainly bacterial sequences but also includes a few archaeal sequences similar to the Methanospirillum hungateiacyl acyl-CoA reductase RfbN. |
| >COG0014 ProA Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.5e-28 Score=267.70 Aligned_cols=379 Identities=18% Similarity=0.230 Sum_probs=283.9
Q ss_pred HHHHHHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh------CCCHHHH-H-----HHHHHHHHH
Q 001665 239 EEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQ------GTTLKAA-Q-----RDVLFGLEV 306 (1035)
Q Consensus 239 ~dv~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e~La~~i~~et------Gk~~~eA-~-----~EV~~a~~~ 306 (1035)
.++.+..++|++|......++.++|.+.|.++|+.|+.+.++|.++..+|. |.+-... + .-+...++.
T Consensus 3 ~~~~~~~~~Ak~A~~~La~~st~~Kn~aL~a~A~~L~~~~~~IL~AN~~Dl~~are~gl~~~m~DRL~L~~~Ri~~ma~g 82 (417)
T COG0014 3 SELEELGKRAKAASRKLATLSTEEKNRALLAMADALEAARAEILAANAKDLAAARENGLSEAMLDRLALTPSRIEAMADG 82 (417)
T ss_pred hHHHHHHHHHHHHHHHHhhcChhhHHHHHHHHHHHHHHhHHHHHHhhHHHHHHHHHcCCcHHHHHHHcCCHHHHHHHHHH
Confidence 457788899999999999999999999999999999998888887766553 3322110 1 112333344
Q ss_pred HHHHHHHHHhhcCcccc--CCCCCCcceeeeccceeEEEECCCCcchhchHHHHHHHHhcCCEEEEeCCCCChhHHHHHH
Q 001665 307 VEQACAVATLQIGEFVP--NALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILA 384 (1035)
Q Consensus 307 l~~~~~~a~~~~g~~~~--~~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~ALaaGNaVVlKPS~~ap~ta~~L~ 384 (1035)
++..+.+... .|+... ....|...+..+.|+|||++| +..--...+...+-+|++||+||||-+..+..+...|+
T Consensus 83 l~~Va~L~DP-vGev~~~~~~~nGL~i~~~rvPLGVigvI--YEsRPnVtvdaaaLclKsGNAvILRGGsea~~Sn~ai~ 159 (417)
T COG0014 83 LRQVAALPDP-VGEVIDGWTLPNGLQIYRVRVPLGVIGVI--YESRPNVTVDAAALCLKSGNAVILRGGSEAIHSNAAIV 159 (417)
T ss_pred HHHHhcCCCc-hHhhhccccCCCCCEEEEEEccceEEEEE--EecCCccHHHHHHHHHhcCCEEEEeCcHHHhhhHHHHH
Confidence 4433332211 111111 123677888899999999999 65555666777888999999999999999999988888
Q ss_pred HH----HHHhCCCCCcEEEeec-chhhHhhhh-cCCCccEEEEeccchHHHHHHHHHHhcCCceeecCCCcceEEEcCCC
Q 001665 385 AL----AMEAGLPDGVLNIVHG-TNDVINHIC-DDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMPDA 458 (1035)
Q Consensus 385 el----l~eAGlP~gvv~vV~g-~~e~~~~L~-~h~~vd~V~fTGS~~vG~~I~~aAa~~l~Pv~lElGGknp~IV~~dA 458 (1035)
++ |.++|+|++.||+|+. +.+....|+ .+.-||.|+--||..--+.|.+.+ -.||+..+-|++.++|+.+|
T Consensus 160 ~~i~~aL~~~~lP~~aVqli~~~~R~~v~~ll~l~~yiD~iIPRGg~~Li~~v~~~a---~vPVi~~~~G~CHiyvd~~A 236 (417)
T COG0014 160 EVIQEALEKAGLPADAVQLIEDTDREEVLELLRLDGYIDLVIPRGGAGLIRRVVENA---TVPVIEHGVGNCHIYVDESA 236 (417)
T ss_pred HHHHHHHHHcCCCHHHhhhccCCCHHHHHHHHhhcCceeEEEcCCcHHHHHHHHhCC---cCCEEecCcceEEEEecccC
Confidence 77 5567999999999987 455555554 456799999999777666665544 37999999999999999999
Q ss_pred CHHHHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHhcccccCCCCCCCcCCCcCHHHHHHHHHHHHHHH
Q 001665 459 SIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAV 537 (1035)
Q Consensus 459 Dld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d~~~~~Gpli~~~~~~rl~~~i~~av 537 (1035)
|++.|.+-++.+|...-+ .|++.+.++||+.+. .|+..|.+.+...
T Consensus 237 Dld~A~~ii~nAKtqrPs-~CNA~EtLLVh~~ia~~fLp~l~~~l~~~-------------------------------- 283 (417)
T COG0014 237 DLDKALKIIVNAKTQRPS-VCNAAETLLVHRAIAKSFLPKLANALQEA-------------------------------- 283 (417)
T ss_pred CHHHHHHHHHcccCCCCc-ccchHHHHHcCHHHHHHhHHHHHHHHHhc--------------------------------
Confidence 999999999999999888 899999999999887 8888888776532
Q ss_pred HCCCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecCCHHHHHHHHHhcCCCcEEEEEcCCHH
Q 001665 538 DNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGL 617 (1035)
Q Consensus 538 ~~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI~laN~~~~GLsasVfS~d~~ 617 (1035)
|.++......... -|.. +......=+..|...++|.|-.++++++||+.+|..+.+|+-+|-|+|..
T Consensus 284 --gvelr~d~~~~~~---------~~~~--~~~A~e~Dw~tEyLd~ilavkvVd~ld~AI~HIn~y~S~HsdaIiTe~~~ 350 (417)
T COG0014 284 --GVELRGDAEALAL---------LPDA--VKPATEEDWDTEYLDLILAVKVVDSLDEAIAHINTYGSGHSDAIITEDYA 350 (417)
T ss_pred --CeEEEcCHHHHHh---------cccc--CCCCchhhHHHHhhhheeEEEEeCCHHHHHHHHHHhCCCCCcceeeCCHH
Confidence 2222221111000 0000 01222233577888999999999999999999999999999999999999
Q ss_pred HHHHHHhccceeEEEEcCCcCCCCCC---CC-CCC----CCCcCcHHHHHhcceeeEEEE
Q 001665 618 AARKFQNEIEARLVGINVPVPSSFSS---IN-ESG----EFNFCGKSGVQFYTQIKTVAQ 669 (1035)
Q Consensus 618 ~a~~~a~~l~sG~V~IN~~~~~PfGG---~g-~SG----~G~~~G~~g~~~ft~~k~v~~ 669 (1035)
.+++|...+++..|+||.++...=|| +| +-| -..-.|+.|++.+|..|++..
T Consensus 351 ~a~~F~~~VDSAaVyvNASTRFtDG~~fG~GaEiGISTqKlHARGPmGLe~LTs~Kyiv~ 410 (417)
T COG0014 351 NAERFVNEVDSAAVYVNASTRFTDGGQFGLGAEIGISTQKLHARGPMGLEALTSYKYIVR 410 (417)
T ss_pred HHHHHHhhcchheEEEecccccccCccccCceEEEeecCcccCCCCCChhhhcceeEEEe
Confidence 99999999999999999886422222 11 122 235679999999999999875
|
|
| >KOG4165 consensus Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.89 E-value=1e-21 Score=210.47 Aligned_cols=375 Identities=18% Similarity=0.179 Sum_probs=271.8
Q ss_pred HHHHHHHHHHhhHhhhCCCHHHHHHHHHHHHHHHHHhHHHHHHHH------HHHhCCCHHHH-HH-----HHHHHHHHHH
Q 001665 241 FKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNI------TVEQGTTLKAA-QR-----DVLFGLEVVE 308 (1035)
Q Consensus 241 v~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e~La~~i------~~etGk~~~eA-~~-----EV~~a~~~l~ 308 (1035)
+++..+.||.|++..++++.++|.++|..++++|..+..++..+. +.+.|....-- +. .+.....-++
T Consensus 2 ~e~~a~~aR~a~r~LqaLs~e~R~~il~~iad~L~~~~~~I~~aN~~Dla~Ake~GL~~sll~RL~l~~~K~~sl~~g~~ 81 (433)
T KOG4165|consen 2 VEEMAENAREAGRILQALSNEDRADILHHIADLLVDNEKEILAANKKDLAEAKEAGLAESLLKRLDLSPGKISSLAAGLR 81 (433)
T ss_pred HHHHHHHHHHHhhHHHhcChhhHHHHHHHHHHHHHhhHHHHHhcchhhHHHHHhcCccHHHHHHhcCChHHHHHHHHHHH
Confidence 466778999999999999999999999999999987766655433 34555322111 11 1122222222
Q ss_pred HHHHHHHhhcCcccc--CCCCCCcceeeeccceeEEEECCCCcchhchHHHHHHHHhcCCEEEEeCCCCChhHHHHHHHH
Q 001665 309 QACAVATLQIGEFVP--NALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAAL 386 (1035)
Q Consensus 309 ~~~~~a~~~~g~~~~--~~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~ALaaGNaVVlKPS~~ap~ta~~L~el 386 (1035)
..+. .....|+... ....|...+..-.|+||.++| |..---.+......|++.||.+++|-...+..+...|.++
T Consensus 82 ~ia~-~edpvGRVl~~~~ladgL~L~qvt~PiGvLLVI--FESRPd~l~qiasLAi~SgN~llLKGGkEa~~Sn~~L~~~ 158 (433)
T KOG4165|consen 82 QIAE-LEDPVGRVLKKTRLADGLELEQVTVPIGVLLVI--FESRPDCLPQIASLAIASGNGLLLKGGKEAAHSNAALHKL 158 (433)
T ss_pred HHHh-cccchhhheeeeeccCCceEEEeeccceEEEEE--eccCchHHHHHHHHHHhcCCeEeecCchhhhhhHHHHHHH
Confidence 2222 1111122111 123455667778999999999 5554444455566799999999999998888888888887
Q ss_pred HHHh----CCCCCcEEEeecchhhHhhhhcCCCccEEEEeccchHHHHHHHHHHhcCCceeecCCCcceEEEcCCCCHHH
Q 001665 387 AMEA----GLPDGVLNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMPDASIDA 462 (1035)
Q Consensus 387 l~eA----GlP~gvv~vV~g~~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~l~Pv~lElGGknp~IV~~dADld~ 462 (1035)
..+| |.|.++|++|....++.+-|-.+.-||.|+-.||..-.+.|.... ..||.+.-.|.+.++|++|||+++
T Consensus 159 v~~al~~~~~~~~aV~LV~sREev~dLl~ld~~IDLvIPRGSs~LVr~Ik~~t---kIPVLGHA~GichvYvd~dad~~k 235 (433)
T KOG4165|consen 159 VQEALGTHGGPGKAVQLVTSREEVSDLLKLDDYIDLVIPRGSSDLVRSIKDTT---KIPVLGHAEGICHVYVDKDADLDK 235 (433)
T ss_pred HHHHhhhccCchhhhhheecHHHHHHHhhhhhheeEEecCCcHHHHHHHhhcc---cCcccccccceeEEEeccccCHHH
Confidence 6665 779999999987777777776677899999999999888886654 389999999999999999999999
Q ss_pred HHHHHHHHHhccCCCCccCCceEEEeCccH--HHHHHHHHHHHhcccccCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCC
Q 001665 463 TLNALVSAGFGAAGERCTALSTAVFVGSSV--QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNG 540 (1035)
Q Consensus 463 Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~--~f~e~Lv~~~~~lkvG~p~d~~~~~Gpli~~~~~~rl~~~i~~av~~G 540 (1035)
|.+-+..+++.+-. .|++.+.++++++.. .|.+.|+..++ .+|
T Consensus 236 A~riv~DaK~dYPA-aCNAmETLLIh~dl~~~~~~~~l~~~l~----------------------------------~~g 280 (433)
T KOG4165|consen 236 AKRIVRDAKCDYPA-ACNAMETLLIHKDLEQSPFFDDLINMLK----------------------------------EEG 280 (433)
T ss_pred HHHHHhcccCCCch-hhhhHHHHhccHhhhhcchHHHHHHHHH----------------------------------hcC
Confidence 99988888887655 899999999998753 45555544432 345
Q ss_pred CcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecCCHHHHHHHHHhcCCCcEEEEEcCCHHHHH
Q 001665 541 ASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAAR 620 (1035)
Q Consensus 541 Akvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI~laN~~~~GLsasVfS~d~~~a~ 620 (1035)
.++.+|-.-. .-..|- ++...-+..|.-.-.++|-.+++.++||+.+|..+.+|+-+|-|+|.+.++
T Consensus 281 Vtl~agpkl~-----~~l~~~--------p~e~~s~~~Ey~~l~~~ievV~~v~~Ai~HI~~hgS~HTD~IvTe~~~~Ae 347 (433)
T KOG4165|consen 281 VTLHAGPKLA-----ALLKFS--------PPEAKSFNTEYGSLECTIEVVDSVQSAIDHIHTHGSSHTDCIVTENEATAE 347 (433)
T ss_pred eEEecChhHH-----hhcCcC--------CchhhhhhhhhcchheeeeecccHHHHHHHHHhcCCcccceEEecCHHHHH
Confidence 5555443210 011111 333444667777777888889999999999999999999999999999999
Q ss_pred HHHhccceeEEEEcCCcC----CCCCCCCCCCCC----CcCcHHHHHhcceeeEEEE
Q 001665 621 KFQNEIEARLVGINVPVP----SSFSSINESGEF----NFCGKSGVQFYTQIKTVAQ 669 (1035)
Q Consensus 621 ~~a~~l~sG~V~IN~~~~----~PfGG~g~SG~G----~~~G~~g~~~ft~~k~v~~ 669 (1035)
.|...+++..|+.|..+. .-||=-.+-|+. ...|+.|++.+...|++..
T Consensus 348 ~Fl~~VDSa~vf~NASTRFaDGfRfGlGaEVGIST~rIHARGPvGveGLlttkw~lR 404 (433)
T KOG4165|consen 348 HFLKHVDSACVFHNASTRFADGFRFGLGAEVGISTSRIHARGPVGVEGLLTTKWLLR 404 (433)
T ss_pred HHHhccchhheeecccccccccccccccceeeeeccceeccCCccccceeeeeeEEe
Confidence 999999999999998754 344322233432 3568999999988888764
|
|
| >PF05893 LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR008670 This family consists of several bacterial Acyl-CoA reductase (LuxC) proteins | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.4e-12 Score=151.75 Aligned_cols=300 Identities=16% Similarity=0.187 Sum_probs=202.8
Q ss_pred cceeeeccceeEEEECCCCcchhchHHHHHHHHhcCCEEEEeCCCCChhHHHHHHHHHHHhCCCC----CcEEEe--ec-
Q 001665 330 DTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPD----GVLNIV--HG- 402 (1035)
Q Consensus 330 ~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~ALaaGNaVVlKPS~~ap~ta~~L~ell~eAGlP~----gvv~vV--~g- 402 (1035)
..+..+.|.|+|+.|.|.|-|+..+ ..++.+|++||..|+|.|...+..+..|++.|.+. .|. ..+.++ ++
T Consensus 80 ~~~~~~~p~g~v~Hi~agNvp~~~~-~S~~~~lL~gn~nivK~ss~d~~~~~~l~~~l~~~-~~~~~l~~~i~v~~~~~~ 157 (399)
T PF05893_consen 80 DGYVRAFPRGLVFHIAAGNVPLVGF-YSLVRGLLSGNANIVKLSSRDPFLAPALLRSLAEI-DPEHPLADSIAVVYWPGG 157 (399)
T ss_pred cchhhccCCceEEEEcCCCccchHH-HHHHHHHHhCCceEEECCCCchhHHHHHHHHHHhh-CccchhhhcEEEEEecCC
Confidence 3567899999999999999998764 56788999999999999999999999999998886 443 446666 33
Q ss_pred chhhHhhhhcCCCccEEEEeccchHHHHHHHHHHhcCCceeecCCCcceEEEcCCCCHHHHHHHHHHHHhccCCCCccCC
Q 001665 403 TNDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTAL 482 (1035)
Q Consensus 403 ~~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~l~Pv~lElGGknp~IV~~dADld~Aa~~Iv~s~f~naGQ~C~a~ 482 (1035)
+.+..+.+.. ..|+|+.+||.++.+.|.+ -.+.++..+..+.-.+-+||+.+++++.++++++.-.+...+|.|.++
T Consensus 158 d~~~~~~~~~--~~D~vv~wGgd~ti~~ir~-~~~~~~~~i~fg~k~S~avi~~~~~~~~~a~~~a~Di~~~dQ~aCsSp 234 (399)
T PF05893_consen 158 DEELEEALSQ--QADAVVAWGGDETIRAIRQ-PLPPGARLIEFGPKYSFAVIDAEAELEEAARRLANDIFLFDQQACSSP 234 (399)
T ss_pred chHHHHHHHH--HCCEEEEeCCHHHHHHHHH-HcCCCCcEeeeCCceEEEEEcCchhHHHHHHHHHHHHHHhhCcccCCC
Confidence 3455666664 7899999999999999988 444456666667778888999999999999999999999999999999
Q ss_pred ceEEEeCc--c-H-HHHHHHHHHHHhcccccCCCCCCCcCCCcCHHHHHHHHHHHH-----HHHHCCCcEeeCCcccccC
Q 001665 483 STAVFVGS--S-V-QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQ-----NAVDNGASLLLDGRNIVVP 553 (1035)
Q Consensus 483 ~~vlV~~~--i-~-~f~e~Lv~~~~~lkvG~p~d~~~~~Gpli~~~~~~rl~~~i~-----~av~~GAkvl~gG~~~~~p 553 (1035)
+.|+|..+ . . +|.++|.+.+.+...-.|.. ..+......+....+ .+...+.+++.+..
T Consensus 235 ~~ifv~~g~~~~~~~f~~~L~~~L~~~~~~~p~~-------~~s~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~----- 302 (399)
T PF05893_consen 235 QVIFVETGDGDSVEEFAERLAEALERAAERYPRG-------ELSIDEAAAISSLRAEAELRYALDGEYRVWSSDD----- 302 (399)
T ss_pred eEEEEECCCcccHHHHHHHHHHHHHHHHHhCCCc-------CCCHHHHHHHHHHHHHHHHHHHhcCCcceeecCC-----
Confidence 99888833 2 2 78888877765542212211 112222222332222 23333333442211
Q ss_pred CCCCCceeeceEEecCCCCCccccccccCcceeEEecCCHHHHHHHHHhcCCCcEEEEEcCCHHHHHHHHh-ccceeEEE
Q 001665 554 GYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQN-EIEARLVG 632 (1035)
Q Consensus 554 ~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI~laN~~~~GLsasVfS~d~~~a~~~a~-~l~sG~V~ 632 (1035)
+ .-||+.... .. .....++=++.|.++++++|++.+++....=-|++++... ....+++. -...|.--
T Consensus 303 ----~---~~~V~~~~~--~~-~~~~pl~r~v~v~~v~~~~e~~~~l~~~~~lQTvgi~~~~-~~~~~~~~~l~~~Gv~R 371 (399)
T PF05893_consen 303 ----N---SWTVIVSPE--PP-LLPSPLNRTVYVVPVDSLEELVPYLRPKRGLQTVGIYPWS-ERLEELARALAAAGVDR 371 (399)
T ss_pred ----C---CEEEEECCC--cc-cccCCCCCEEEEEEcCCHHHHHHHhhhcCCCeeEEEecCh-hhHHHHHHHHHhcCCee
Confidence 1 124443222 12 2233445688899999999999999987322577887554 44555555 33444222
Q ss_pred EcCCcCCCCCCCCC--CCCCCcCcHHHHHhcce
Q 001665 633 INVPVPSSFSSINE--SGEFNFCGKSGVQFYTQ 663 (1035)
Q Consensus 633 IN~~~~~PfGG~g~--SG~G~~~G~~g~~~ft~ 663 (1035)
| .|.|-+.. .| +.|-|.+-+..|++
T Consensus 372 i-----v~~G~m~~~~~g-~~hDG~~~L~~lvR 398 (399)
T PF05893_consen 372 I-----VPLGQMLDFDPG-WPHDGMYPLRRLVR 398 (399)
T ss_pred e-----CCCCcCCCCCCC-CCcCCHhHHHHHhC
Confidence 2 34444432 23 36778888888765
|
The channelling of fatty acids into the fatty aldehyde substrate for the bacterial bioluminescence reaction is catalysed by a fatty acid reductase multienzyme complex, which channels fatty acids through the thioesterase (LuxD), synthetase (LuxE) and reductase (LuxC) components [].; GO: 0003995 acyl-CoA dehydrogenase activity, 0008218 bioluminescence, 0055114 oxidation-reduction process |
| >PF03101 FAR1: FAR1 DNA-binding domain; InterPro: IPR004330 Phytochrome A is the primary photoreceptor for mediating various far-red light-induced responses in higher plants | Back alignment and domain information |
|---|
Probab=99.62 E-value=5.2e-16 Score=143.44 Aligned_cols=84 Identities=32% Similarity=0.536 Sum_probs=73.6
Q ss_pred HHHHHHhhccCcEEEEccccCC------ccEEEEEccCCcccCCCccccccccccccccccCCCceEeeeec-CCcEEEE
Q 001665 22 KHVRDFGTNQGYVVTIKKSRKD------RRVILGCDRGGVYRNRRKIDENKRKRKACSRLINCPFEAIGKKE-DDVWVLT 94 (1035)
Q Consensus 22 ~~~~~~A~~~GF~I~i~~S~~~------k~v~~~C~rgG~yr~~~k~~~~~~~R~~~S~ktgCpf~i~~k~~-~~~W~i~ 94 (1035)
+||+.||..+||+|++.+|++. .++.|+|+++|.++.+... ...++|++.++||||||+|.+++. ++.|.|.
T Consensus 1 ~fy~~yA~~~GF~vr~~~s~~~~~~~~~~~~~~~C~r~G~~~~~~~~-~~~~~r~~~s~ktgC~a~i~v~~~~~~~w~v~ 79 (91)
T PF03101_consen 1 DFYNSYARRHGFSVRKSSSRKSKKNGEIKRVTFVCSRGGKYKSKKKN-EEKRRRNRPSKKTGCKARINVKRRKDGKWRVT 79 (91)
T ss_pred CHHHHhcCcCCeEEEEeeeEeCCCCceEEEEEEEECCcccccccccc-cccccccccccccCCCEEEEEEEccCCEEEEE
Confidence 5999999999999999998876 3688999999988776553 345677889999999999999986 9999999
Q ss_pred EccCCCCCCCCC
Q 001665 95 IKNGEHNHEPFK 106 (1035)
Q Consensus 95 ~~~~~HNH~ps~ 106 (1035)
.++.+||||+.|
T Consensus 80 ~~~~~HNH~L~P 91 (91)
T PF03101_consen 80 SFVLEHNHPLCP 91 (91)
T ss_pred ECcCCcCCCCCC
Confidence 999999999976
|
It has been found that the proteins governing this response, which include FAR-RED ELONGATED HYPOCOTYL3 (FHY3) and FAR-RED-IMPAIRED RESPONSE1 (FAR1), are a pair of homologous proteins sharing significant sequence homology to mutator-like transposases. These proteins appear to be novel transcription factors, which are essential for activating the expression of FHY1 and FHL (for FHY1-like) and related genes, whose products are required for light-induced phytochrome A nuclear accumulation and subsequent light responses in plants. The FRS (FAR1 Related Sequences) family of proteins share a similar domain structure to mutator-like transposases, including an N-terminal C2H2 zinc finger domain, a central putative core transposase domain, and a C-terminal SWIM motif (named after SWI2/SNF and MuDR transposases). It seems plausible that the FRS family represent transcription factors derived from mutator-like transposases [, ]. This entry represents a domain found in FAR1 and FRS proteins. It contains a WRKY like fold and is therefore most likely a zinc binding DNA-binding domain. |
| >PLN03097 FHY3 Protein FAR-RED ELONGATED HYPOCOTYL 3; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=3.1e-15 Score=184.74 Aligned_cols=107 Identities=21% Similarity=0.381 Sum_probs=85.2
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHhhccCcEEEEccccCCc------cEEEEEccCCcccCCCcc-----------ccc
Q 001665 3 QKKMIPPPPGTFQDREDLIKHVRDFGTNQGYVVTIKKSRKDR------RVILGCDRGGVYRNRRKI-----------DEN 65 (1035)
Q Consensus 3 ~~~m~Ppp~~~F~S~eea~~~~~~~A~~~GF~I~i~~S~~~k------~v~~~C~rgG~yr~~~k~-----------~~~ 65 (1035)
...+.|..||+|+|.|||++||+.||+..||+|++.++++.+ ...|+|+|+|..+++.+. ...
T Consensus 69 ~~~~~P~vGMeF~S~eeA~~FYn~YA~~~GFsVRi~~srrsk~~~~ii~r~fvCsreG~~~~~~~~~~~~~~~~~k~~~~ 148 (846)
T PLN03097 69 DTNLEPLSGMEFESHGEAYSFYQEYARSMGFNTAIQNSRRSKTSREFIDAKFACSRYGTKREYDKSFNRPRARQTKQDPE 148 (846)
T ss_pred CCCccCcCCCeECCHHHHHHHHHHHHhhcCceEEeeceeccCCCCcEEEEEEEEcCCCCCcccccccccccccccccCcc
Confidence 346789999999999999999999999999999998887654 256999999965432110 001
Q ss_pred cccccccccccCCCceEeeee-cCCcEEEEEccCCCCCCCCCCCC
Q 001665 66 KRKRKACSRLINCPFEAIGKK-EDDVWVLTIKNGEHNHEPFKDMS 109 (1035)
Q Consensus 66 ~~~R~~~S~ktgCpf~i~~k~-~~~~W~i~~~~~~HNH~ps~~~~ 109 (1035)
.+++++...||||+++|.+++ .+|+|+|..+..+||||+.++..
T Consensus 149 ~~~~rR~~tRtGC~A~m~Vk~~~~gkW~V~~fv~eHNH~L~p~~~ 193 (846)
T PLN03097 149 NGTGRRSCAKTDCKASMHVKRRPDGKWVIHSFVKEHNHELLPAQA 193 (846)
T ss_pred cccccccccCCCCceEEEEEEcCCCeEEEEEEecCCCCCCCCccc
Confidence 112344568999999999987 68999999999999999998754
|
|
| >KOG2449 consensus Methylmalonate semialdehyde dehydrogenase [Amino acid transport and metabolism; Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.56 E-value=3.6e-15 Score=142.83 Aligned_cols=142 Identities=52% Similarity=0.861 Sum_probs=127.7
Q ss_pred EeCccHHHHHHHHHHHHhcccccCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCcEeeCCcccccCCCCCCceeeceEE
Q 001665 487 FVGSSVQWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTIL 566 (1035)
Q Consensus 487 V~~~i~~f~e~Lv~~~~~lkvG~p~d~~~~~Gpli~~~~~~rl~~~i~~av~~GAkvl~gG~~~~~p~~~~g~fv~PTIl 566 (1035)
++.+...|.+.|++..+.|++-+...+++|+ .+..+|+.++++. .+...|....++++++|.|+.||||
T Consensus 4 ~vg~aksW~~~lve~ak~l~v~~g~kp~tD~-----~a~~~ri~~liqS------~~~~~~r~~yl~~ya~~~f~~~tiL 72 (157)
T KOG2449|consen 4 MVGAAKSWHPTLVEDAKVLKVNAGEKPQTDK-----YAPKVRIDKLIQS------EDPLDGRFIYLPGYAEGNFVGPTIL 72 (157)
T ss_pred EechhhhhhHHHHHhhhheEeccCCCCCccc-----hhHHHHHHHHhcC------cCccCCceEEeeccccCCcccceEE
Confidence 4455557899999999999999888888887 6677888888875 3667777778888999999999999
Q ss_pred ecCCCCCccccccccCcceeEEecCCHHHHHHHHHhcCCCcEEEEEcCCHHHHHHHHhccceeEEEEcCCcCCC
Q 001665 567 RDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPVPSS 640 (1035)
Q Consensus 567 ~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI~laN~~~~GLsasVfS~d~~~a~~~a~~l~sG~V~IN~~~~~P 640 (1035)
. |.|+|.++.||+|||||..+.-++++|||.++|+++||.+..|||.+.+.++++....++|.|.+|.+.+.|
T Consensus 73 s-vtP~ms~ykeeI~gpVlv~l~~~tldd~I~Iin~nPygn~t~i~Tsn~atark~~~e~~a~qig~~~~ip~i 145 (157)
T KOG2449|consen 73 S-VTPNMSCYKEEIFGPVLVRLETETLDDAIFIINNNPYGNGTAIFTSNGATARKFCHEPDAGQIGANVPIPVI 145 (157)
T ss_pred E-ecCCcceeHhhhhcceEEEEeecCCCceeEEEecCCCCceeEEEecCcHHhhhhhcCCCccceecccccccc
Confidence 8 999999999999999999999999999999999999999999999999999999999999999999987633
|
|
| >PF08731 AFT: Transcription factor AFT; InterPro: IPR014842 AFT (activator of iron transcription) is an iron regulated transcriptional activator that regulates the expression of genes involved in iron homeostasis | Back alignment and domain information |
|---|
Probab=99.50 E-value=6.8e-14 Score=130.65 Aligned_cols=90 Identities=29% Similarity=0.619 Sum_probs=77.6
Q ss_pred CCCHHHHHHHHHHHhhccCcEEEEccccCCccEEEEEccCCcccCCCccc-------------------ccccccccccc
Q 001665 14 FQDREDLIKHVRDFGTNQGYVVTIKKSRKDRRVILGCDRGGVYRNRRKID-------------------ENKRKRKACSR 74 (1035)
Q Consensus 14 F~S~eea~~~~~~~A~~~GF~I~i~~S~~~k~v~~~C~rgG~yr~~~k~~-------------------~~~~~R~~~S~ 74 (1035)
|.+.+|+..||+++++.+||.|+|.||+.. .++|.|-.+|.|+...... .......+.++
T Consensus 1 F~~k~~ikpwlq~~~~~~Gi~iVIerSd~~-ki~FkCk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~k~t~sr 79 (111)
T PF08731_consen 1 FDDKDEIKPWLQKIFYPQGIGIVIERSDKK-KIVFKCKNGKRYRHKKKKKGQAQAQQKESTSGNKNKSSKKKKKKRTKSR 79 (111)
T ss_pred CCchHHHHHHHHHHhhhcCceEEEEecCCc-eEEEEEecCCCcccccccccccccccccccccccccccccccCCccccc
Confidence 899999999999999999999999999776 8999999999988765521 12223456789
Q ss_pred ccCCCceEeeee--cCCcEEEEEccCCCCCCC
Q 001665 75 LINCPFEAIGKK--EDDVWVLTIKNGEHNHEP 104 (1035)
Q Consensus 75 ktgCpf~i~~k~--~~~~W~i~~~~~~HNH~p 104 (1035)
++.|||+|++.. ..+.|.|.++++.||||+
T Consensus 80 k~~CPFriRA~yS~k~k~W~lvvvnn~HnH~l 111 (111)
T PF08731_consen 80 KNTCPFRIRANYSKKNKKWTLVVVNNEHNHPL 111 (111)
T ss_pred ccCCCeEEEEEEEecCCeEEEEEecCCcCCCC
Confidence 999999999875 799999999999999996
|
This entry includes the paralogous pair of transcription factors AFT1 and AFT2. |
| >PF07368 DUF1487: Protein of unknown function (DUF1487); InterPro: IPR009961 This family consists of several uncharacterised proteins from Drosophila melanogaster | Back alignment and domain information |
|---|
Probab=98.36 E-value=5.9e-06 Score=87.30 Aligned_cols=164 Identities=14% Similarity=0.126 Sum_probs=120.8
Q ss_pred cceEEEcCCCCHHHHHHHHHHHHhccCCCCccCCceEEEeCccH-HHHHHHHHHHHhcccccCCCCCCCcCCCcCHHHHH
Q 001665 449 KNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDASADVGPVVSVEVKD 527 (1035)
Q Consensus 449 knp~IV~~dADld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~-~f~e~Lv~~~~~lkvG~p~d~~~~~Gpli~~~~~~ 527 (1035)
..-+||++|.|++.|+..++.+.-.--|-. +.-.|+|++.+. +|++++..+++.+. + .+.+...+.
T Consensus 5 P~lMIvfe~GDlnsA~~~L~~sl~~Pf~~~--~VatVlVqEsireefi~rvr~~m~pl~------~-----~va~Hpny~ 71 (215)
T PF07368_consen 5 PQLMIVFEDGDLNSAMHYLLESLHNPFAPG--AVATVLVQESIREEFIERVRSRMKPLS------P-----QVANHPNYL 71 (215)
T ss_pred CeEEEEEeCCCHHHHHHHHHHHHhCcccCC--cEEEEEEeHHHHHHHHHHHHHhCccCC------h-----hhccCcHHH
Confidence 345899999999999999999987766643 556788888887 88888887776552 1 122333455
Q ss_pred HHHHHHHHHHHCCCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecCCHHHHHHHHHhc-CCC
Q 001665 528 QISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRN-RFV 606 (1035)
Q Consensus 528 rl~~~i~~av~~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI~laN~~-~~G 606 (1035)
|-.+.++ .-+++++.++... .-..-.|.|+.+++.. .+.+.. .+|+++..|++..||+++++.- -..
T Consensus 72 rsl~~i~---~l~~~~I~~~~~~------~~~~aSPilV~d~~h~--~fg~~P-TgViTlhtFRt~~Ea~~l~~kE~l~f 139 (215)
T PF07368_consen 72 RSLKKIK---CLNAKTIVADFEN------VPPPASPILVCDFTHS--YFGDGP-TGVITLHTFRTPKEAIELCAKETLPF 139 (215)
T ss_pred HHHHHHH---hcCCeEEEecccC------CCCCCCCEEEcCCCHH--HcCCCC-CeEEEEEccCCHHHHHHHHhcCCCCc
Confidence 5444444 4688888874321 1123368888877653 233322 3799999999999999999974 233
Q ss_pred cEEEEEcCCHHHHHHHHhccceeEEEEcCCc
Q 001665 607 NGASIFTSSGLAARKFQNEIEARLVGINVPV 637 (1035)
Q Consensus 607 LsasVfS~d~~~a~~~a~~l~sG~V~IN~~~ 637 (1035)
-+.+||++-.+.+-+++.+++...++||+..
T Consensus 140 ~SVsiW~ekla~~Yel~~~l~~~~f~iNC~~ 170 (215)
T PF07368_consen 140 DSVSIWNEKLASAYELAARLPCDTFYINCFN 170 (215)
T ss_pred ceEEEeCcHHHHHHHHHHhCCCCEEEEEecc
Confidence 5999999999999999999999999999863
|
The function of this family is unknown. |
| >PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=98.17 E-value=9.5e-06 Score=106.08 Aligned_cols=106 Identities=15% Similarity=0.112 Sum_probs=83.7
Q ss_pred CCCCCcceeeeccceeEEEECCCCcchhchHHHHHHHHhcCCEEEEeCCCCChhHHHHHHHHHHHhCCCCCcEEEeecch
Q 001665 325 ALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGTN 404 (1035)
Q Consensus 325 ~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~ALaaGNaVVlKPS~~ap~ta~~L~ell~eAGlP~gvv~vV~g~~ 404 (1035)
...|+.+..+..|.|+|++|+||| ..++.+++.||++||+||+||++.++. . .+.+|..+.+.+
T Consensus 1066 GPTGEsN~L~l~~RG~vlcisp~~---~~~l~Qi~AALaaGn~vi~~~~~~~~~-------~--~~~Lp~~~~~~~---- 1129 (1208)
T PRK11905 1066 GPTGESNLLSLHPRGRVLCVADTE---EALLRQLAAALATGNVAVVAADSGLAA-------A--LADLPGLVAARI---- 1129 (1208)
T ss_pred CCCCcceeEEecCCceEEEECCcH---HHHHHHHHHHHHhCCEEEEeCCcccHH-------H--HHhCcccccccc----
Confidence 457889999999999999999999 557789999999999999999987542 1 123566555554
Q ss_pred hhHhhhhcCCCccEEEEeccchHHHHHHHHHHhcC---CceeecC
Q 001665 405 DVINHICDDEDIKAISFVASSTASVQMYARAAARG---KRVQSNR 446 (1035)
Q Consensus 405 e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~l---~Pv~lEl 446 (1035)
..+..+..+++|+.|.|+|+.++.+.|.++.|++. .|++.|.
T Consensus 1130 ~~~~~~~~~~~i~~V~~~G~~~~a~~i~~~LA~R~G~Ivpliaet 1174 (1208)
T PRK11905 1130 DWTQDWEADDPFAGALLEGDAERARAVRQALAARPGAIVPLIAAE 1174 (1208)
T ss_pred ccccccccCCcccEEEEeCCHHHHHHHHHHHHhCCCCcceEEecC
Confidence 33457778888999999999999999999888774 3444444
|
|
| >PF03108 DBD_Tnp_Mut: MuDR family transposase; InterPro: IPR004332 The plant MuDR transposase domain is present in plant proteins that are presumed to be the transposases for Mutator transposable elements [, ] | Back alignment and domain information |
|---|
Probab=97.76 E-value=6.3e-05 Score=65.72 Aligned_cols=61 Identities=26% Similarity=0.556 Sum_probs=52.5
Q ss_pred CCCCCCCCHHHHHHHHHHHhhccCcEEEEccccCCccEEEEEccCCcccCCCccccccccccccccccCCCceEeeee--
Q 001665 9 PPPGTFQDREDLIKHVRDFGTNQGYVVTIKKSRKDRRVILGCDRGGVYRNRRKIDENKRKRKACSRLINCPFEAIGKK-- 86 (1035)
Q Consensus 9 pp~~~F~S~eea~~~~~~~A~~~GF~I~i~~S~~~k~v~~~C~rgG~yr~~~k~~~~~~~R~~~S~ktgCpf~i~~k~-- 86 (1035)
..|++|+|.+|+.+++..||..++|.+...+|.+. ++.++|... ||||+|.+.+
T Consensus 5 ~~G~~F~~~~e~k~av~~yai~~~~~~~v~ksd~~-r~~~~C~~~-----------------------~C~Wrv~as~~~ 60 (67)
T PF03108_consen 5 EVGQTFPSKEEFKEAVREYAIKNGFEFKVKKSDKK-RYRAKCKDK-----------------------GCPWRVRASKRK 60 (67)
T ss_pred ccCCEECCHHHHHHHHHHHHHhcCcEEEEeccCCE-EEEEEEcCC-----------------------CCCEEEEEEEcC
Confidence 35899999999999999999999999999999755 899999621 6999999986
Q ss_pred cCCcEEE
Q 001665 87 EDDVWVL 93 (1035)
Q Consensus 87 ~~~~W~i 93 (1035)
+.+.|.|
T Consensus 61 ~~~~~~I 67 (67)
T PF03108_consen 61 RSDTFQI 67 (67)
T ss_pred CCCEEEC
Confidence 5677764
|
The function of these proteins is unknown. More information about these proteins can be found at Protein of the Month: Transposase []. |
| >PF00815 Histidinol_dh: Histidinol dehydrogenase; InterPro: IPR012131 Histidinol dehydrogenase (HDH) catalyzes the terminal step in the biosynthesis of histidine in bacteria, fungi, and plants, the four-electron oxidation of L-histidinol to histidine | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.2 Score=58.68 Aligned_cols=263 Identities=15% Similarity=0.102 Sum_probs=122.4
Q ss_pred CCCcceeeeccceeEEEECCC-Ccchh-chHHHHHHHHhcCCEE--EEeCCCCChhHHHHHHHHHHHhCCCCCcEEEeec
Q 001665 327 CGLDTYCFREPLGVCAGICPF-NFPDM-TPLWMFSIAVTCGNTF--ILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHG 402 (1035)
Q Consensus 327 ~g~~~~~~~ePlGVV~iI~P~-N~Pl~-~~~~~l~~ALaaGNaV--VlKPS~~ap~ta~~L~ell~eAGlP~gvv~vV~g 402 (1035)
+|......+.|+.-|++..|. .+|+. +.+-.+++|-.||..= +..|....-...-.+.-.+..+|+.+ ++ .+ |
T Consensus 96 ~G~~~g~~~~Pi~rvG~YVPGG~a~~pStvlM~aiPA~vAGV~~Iv~~TPp~~~G~i~p~vL~Aa~~~Gv~e-vy-~v-G 172 (412)
T PF00815_consen 96 PGVILGQRYRPIERVGLYVPGGRAPYPSTVLMTAIPAKVAGVKEIVVCTPPPKDGKINPAVLAAAHLAGVDE-VY-KV-G 172 (412)
T ss_dssp TTEEEEEEEEE-SEEEEE---SSS--THHHHHHHHHHHHHT-SEEEEEE-SS------HHHHHHHHHTT-SE-EE-E---
T ss_pred CCcEEEEEEEEhhheEEEccCCCCCccHHHHHcccchhhcCCCeEEEEcCCCccCCCCHHHHHHHHHcCCCE-EE-ec-c
Confidence 465666789999999999993 34432 2334577899888654 44565442222223334456677653 11 12 4
Q ss_pred chhhHhhhhc----CCCccEEEEeccchHHHHHHHHHHhcCCceeecCCCcc--eEEEcCCCCHHHHHHHHHHHHhccCC
Q 001665 403 TNDVINHICD----DEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKN--YAIIMPDASIDATLNALVSAGFGAAG 476 (1035)
Q Consensus 403 ~~e~~~~L~~----h~~vd~V~fTGS~~vG~~I~~aAa~~l~Pv~lElGGkn--p~IV~~dADld~Aa~~Iv~s~f~naG 476 (1035)
+.....+|.- =++||+|+=.|..-+... |..-....- +=-+.|.+ -+|.|++||.+.+|.+++.-+=.+..
T Consensus 173 GaqAIAAlAyGTeti~~VDkIvGPGN~yV~~A--K~~v~g~V~-ID~~AGPSEv~ViAD~~A~p~~vAaDLLaQAEHd~~ 249 (412)
T PF00815_consen 173 GAQAIAALAYGTETIPKVDKIVGPGNAYVTAA--KRLVFGDVG-IDMIAGPSEVLVIADETANPEFVAADLLAQAEHDPD 249 (412)
T ss_dssp HHHHHHHHHH--SSS---SEEE---SHHHHHH--HHHHHHS-E-ES------EEEEEE-TTS-HHHHHHHHHHHHTT-TT
T ss_pred cHHHHHHHHcCCCCCCceeEEECCCcHHHHHH--HHHhcCCcc-cCCCCCCCceEEEECCCCCHHHHHHHHHHHhccCCC
Confidence 4444444432 279999999886543211 111111111 11123333 35557789999999999887766654
Q ss_pred CCccCCceEEEeCccHHHHHHHHHHHHhcccccCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCcEeeCCcccccCCCC
Q 001665 477 ERCTALSTAVFVGSSVQWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYE 556 (1035)
Q Consensus 477 Q~C~a~~~vlV~~~i~~f~e~Lv~~~~~lkvG~p~d~~~~~Gpli~~~~~~rl~~~i~~av~~GAkvl~gG~~~~~p~~~ 556 (1035)
-.| ++|..+ .++.+++.+++.+.- ..+-. .+.++.+.+
T Consensus 250 a~~-----vLvt~s-~~la~~V~~~v~~~l-----------~~l~r-------~~i~~~sl~------------------ 287 (412)
T PF00815_consen 250 AQA-----VLVTTS-EELAEAVEAEVERQL-----------EELPR-------REIAEKSLE------------------ 287 (412)
T ss_dssp -EE-----EEEES--HHHHHHHHHHHHHHH-----------TT-TT-------HHHHHHHHT------------------
T ss_pred Cce-----EEEECC-HHHHHHHHHHHHHHH-----------HhCCc-------hHHHHHHHH------------------
Confidence 333 455444 245555555443220 00001 111222211
Q ss_pred CCceeeceEEecCCCCCccccccccCcceeEEecCCHHHHHHHHHhcCCCcEEEEEcCCHHHHHHHHhc-cceeEEEEcC
Q 001665 557 NGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNE-IEARLVGINV 635 (1035)
Q Consensus 557 ~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI~laN~~~~GLsasVfS~d~~~a~~~a~~-l~sG~V~IN~ 635 (1035)
--.++.++|++||++++|..-- =-+.|.++|. +++..+ -.+|.|++..
T Consensus 288 ---------------------------~g~ii~~~~l~ea~~~~N~~AP-EHLel~~~~~---~~~~~~i~~AGaiFlG~ 336 (412)
T PF00815_consen 288 ---------------------------NGAIIVVDSLEEAIELANEYAP-EHLELQVEDP---EELLEKIRNAGAIFLGE 336 (412)
T ss_dssp ---------------------------T-EEEE-SSHHHHHHHHHHH---SEEEEESTTH---HHHGGG--S-SEEEEST
T ss_pred ---------------------------CCeEEEECCHHHHHHHHHHhhH-HHHHHHHcCH---HHHHHHhhccChhhcCC
Confidence 1124567899999999998522 2378888886 344444 4799999997
Q ss_pred CcCCCCC----C----CCCCCCCCcCcHHHHHhcceeeEEE
Q 001665 636 PVPSSFS----S----INESGEFNFCGKSGVQFYTQIKTVA 668 (1035)
Q Consensus 636 ~~~~PfG----G----~g~SG~G~~~G~~g~~~ft~~k~v~ 668 (1035)
..+.+|| | ...+|.+++.|..+...|...-++.
T Consensus 337 ~tp~a~GDY~aGpNHvLPT~G~AR~~sgLsv~~FlK~~s~~ 377 (412)
T PF00815_consen 337 YTPEALGDYAAGPNHVLPTGGTARFSSGLSVDDFLKRISVQ 377 (412)
T ss_dssp T--HHHHHHTSSS------TTGGGT---S-GGGGEEEEEEE
T ss_pred CCCHHHhhhccCCCccCCCCccccccCCCcHHHccceeeEE
Confidence 6432221 1 1224677888888999998876654
|
In 4-electron dehydrogenases, a single active site catalyses 2 separate oxidation steps: oxidation of the substrate alcohol to an intermediate aldehyde; and oxidation of the aldehyde to the product acid, in this case His []. The reaction proceeds via a tightly- or covalently-bound inter-mediate, and requires the presence of 2 NAD molecules []. By contrast with most dehydrogenases, the substrate is bound before the NAD coenzyme []. A Cys residue has been implicated in the catalytic mechanism of the second oxidative step []. In bacteria HDH is a single chain polypeptide; in fungi it is the C-terminal domain of a multifunctional enzyme which catalyzes three different steps of histidine biosynthesis; and in plants it is expressed as nuclear encoded protein precursor which is exported to the chloroplast [].; GO: 0004399 histidinol dehydrogenase activity, 0008270 zinc ion binding, 0051287 NAD binding, 0000105 histidine biosynthetic process, 0055114 oxidation-reduction process; PDB: 1KAE_B 1K75_A 1KAH_A 1KAR_B. |
| >PLN02926 histidinol dehydrogenase | Back alignment and domain information |
|---|
Probab=96.84 E-value=1.6 Score=51.58 Aligned_cols=258 Identities=16% Similarity=0.126 Sum_probs=144.6
Q ss_pred CCCcceeeeccceeEEEECCC---CcchhchHHHHHHHHhcCCEE--EEeCCCC-ChhHHHHHHHHHHHhCCCCCcEEEe
Q 001665 327 CGLDTYCFREPLGVCAGICPF---NFPDMTPLWMFSIAVTCGNTF--ILKPSEK-NPGTSMILAALAMEAGLPDGVLNIV 400 (1035)
Q Consensus 327 ~g~~~~~~~ePlGVV~iI~P~---N~Pl~~~~~~l~~ALaaGNaV--VlKPS~~-ap~ta~~L~ell~eAGlP~gvv~vV 400 (1035)
+|...-..+.|+.-|++..|. -||-..+ -.+++|-.||..= +..|... .......|+ ..+.+|+.+ ++.
T Consensus 110 ~Gv~~g~~~~Pi~rvG~YVPGG~a~ypStvL-M~aiPAkvAGV~~Iv~~TPp~~~g~i~p~iL~-AA~~~Gv~e-Iy~-- 184 (431)
T PLN02926 110 PGVRCRRVARPIGAVGLYVPGGTAVLPSTAL-MLAVPAQIAGCKTVVLATPPRKDGSICPEVLY-CAKKAGVTH-ILK-- 184 (431)
T ss_pred CCeEEEEEEechHHeeEeccCCCCCccHHHH-HhhcchhhcCCCeEEEEECCCcCCCCCHHHHH-HHHHcCCCe-eec--
Confidence 455556789999999999997 3554444 4577899898754 4456532 112333344 446777664 111
Q ss_pred ecchhhHhhhh----cCCCccEEEEeccchHHHHHHHHHHhc---CCc--eee-cCCCcc--eEEEcCCCCHHHHHHHHH
Q 001665 401 HGTNDVINHIC----DDEDIKAISFVASSTASVQMYARAAAR---GKR--VQS-NRGGKN--YAIIMPDASIDATLNALV 468 (1035)
Q Consensus 401 ~g~~e~~~~L~----~h~~vd~V~fTGS~~vG~~I~~aAa~~---l~P--v~l-ElGGkn--p~IV~~dADld~Aa~~Iv 468 (1035)
-|+.....+|. .-|+||+|+=.|..-+. +|+. +.+ |-. -..|.+ -+|.|++||.+.+|..++
T Consensus 185 vGGaQAIAAlAyGTetIp~VDkIvGPGN~yV~------~AK~~v~G~~~~VgID~~AGPSEvlIiAD~tA~p~~vAaDLL 258 (431)
T PLN02926 185 AGGAQAIAAMAWGTDSCPKVDKIFGPGNQYVT------AAKMILQNSEAMVSIDMPAGPSEVLVIADKTANPVHVAADLL 258 (431)
T ss_pred cCCHHHHHHHHcCCCCCCCCCEEECCCcHHHH------HHHHHhhCCCCccccCCCCCCceeEEEeCCCCCHHHHHHHHH
Confidence 14444444443 23689999988864332 2222 221 211 122333 344566799999999998
Q ss_pred HHHhccCCCCccCCceEEEeCccHHHHHHHHHHHHhcccccCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCcEeeCCc
Q 001665 469 SAGFGAAGERCTALSTAVFVGSSVQWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGR 548 (1035)
Q Consensus 469 ~s~f~naGQ~C~a~~~vlV~~~i~~f~e~Lv~~~~~lkvG~p~d~~~~~Gpli~~~~~~rl~~~i~~av~~GAkvl~gG~ 548 (1035)
.-+=.+..-.| ++|..+. ++.+++.+++.+.- .-+-. .+.++.+...
T Consensus 259 aQAEHdp~a~a-----iLvT~s~-~la~~V~~~v~~ql-----------~~l~r-------~~i~~~sl~~--------- 305 (431)
T PLN02926 259 SQAEHGPDSQV-----VLVAVGD-VDLDAIEEEVEKQC-----------QSLPR-------GEIASKALGH--------- 305 (431)
T ss_pred HHhccCCCCcE-----EEEECCH-HHHHHHHHHHHHHH-----------HhCCh-------HHHHHHHHHC---------
Confidence 77665544222 4454442 34444444432210 00000 1122222111
Q ss_pred ccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecCCHHHHHHHHHhcCCCcEEEEEcCCHHHHHHHHhc-cc
Q 001665 549 NIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNE-IE 627 (1035)
Q Consensus 549 ~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI~laN~~~~GLsasVfS~d~~~a~~~a~~-l~ 627 (1035)
-.|+.++|++||++++|..-- --+-|.++|.. .+..+ -.
T Consensus 306 ------------------------------------g~iivv~~l~ea~~~~N~~AP-EHLei~~~~~~---~~l~~i~n 345 (431)
T PLN02926 306 ------------------------------------SFIVVARDMAEAISFSNLYAP-EHLIVNVEDAE---SWLDKIDN 345 (431)
T ss_pred ------------------------------------CEEEEECCHHHHHHHHHhhCh-HhheehhcCHH---HHHhhcCc
Confidence 224566899999999998422 22567888863 33433 47
Q ss_pred eeEEEEcCCcCCCCCCC--------CCCCCCCcCcHHHHHhcceeeEEE
Q 001665 628 ARLVGINVPVPSSFSSI--------NESGEFNFCGKSGVQFYTQIKTVA 668 (1035)
Q Consensus 628 sG~V~IN~~~~~PfGG~--------g~SG~G~~~G~~g~~~ft~~k~v~ 668 (1035)
+|.|++....+.++|=+ ...|.+++.|..+...|..+-++.
T Consensus 346 AGaiFlG~~sp~a~GDY~aGpNHvLPT~G~AR~~sgLsv~~FlK~~s~~ 394 (431)
T PLN02926 346 AGSVFLGRWTPESVGDYASGTNHVLPTYGYARMYGGVSLDSFLKYMTVQ 394 (431)
T ss_pred cceeccCCCCchhhhccccCcCcccCCCcceeecCCCcHHHhcceeeEE
Confidence 99999976544333321 124677888888999998865554
|
|
| >PRK12447 histidinol dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.53 Score=55.33 Aligned_cols=260 Identities=14% Similarity=0.131 Sum_probs=144.8
Q ss_pred CCCcceeeeccceeEEEECCC-Ccchh-chHHHHHHHHhcCCEEE--EeCCCCChhHHHHHHHHHHHhCCCCCcEEEeec
Q 001665 327 CGLDTYCFREPLGVCAGICPF-NFPDM-TPLWMFSIAVTCGNTFI--LKPSEKNPGTSMILAALAMEAGLPDGVLNIVHG 402 (1035)
Q Consensus 327 ~g~~~~~~~ePlGVV~iI~P~-N~Pl~-~~~~~l~~ALaaGNaVV--lKPS~~ap~ta~~L~ell~eAGlP~gvv~vV~g 402 (1035)
.|...-..+.|+.-|++..|. .+|+. +.+-.+++|-.||..=| ..|..........|+ ....+|+.+ ++. -|
T Consensus 105 ~Gv~~g~~~~Pl~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~~~i~p~iL~-Aa~~~Gv~e-Iy~--vG 180 (426)
T PRK12447 105 PGVILGHRNIPVNSVGCYVPGGRYPLVASAHMSVLTAKVAGVKRVIACTPPFPGEPPPAIVA-AMHLAGADE-IYV--LG 180 (426)
T ss_pred CCeEEEEEEeehheEEEEeCCCCCcchHHHHHhhcchhhcCCCeEEEEeCCCCCCCCHHHHH-HHHHcCCCe-ehh--cC
Confidence 455556689999999999995 34432 23345778999997644 455532212333334 346676653 111 14
Q ss_pred chhhHhhhh----cCCCccEEEEeccchHHHHHHHHHHhcC--Cceee-cCCCcc--eEEEcCCCCHHHHHHHHHHHHhc
Q 001665 403 TNDVINHIC----DDEDIKAISFVASSTASVQMYARAAARG--KRVQS-NRGGKN--YAIIMPDASIDATLNALVSAGFG 473 (1035)
Q Consensus 403 ~~e~~~~L~----~h~~vd~V~fTGS~~vG~~I~~aAa~~l--~Pv~l-ElGGkn--p~IV~~dADld~Aa~~Iv~s~f~ 473 (1035)
+.....+|. .-|+||+|+=.|..-+. +|+.. ..|-. -+.|.+ -+|-|++||.+.+|..++.-+=.
T Consensus 181 GAQAIAAlAyGTetIp~VDkIvGPGN~yV~------~AK~~v~g~V~ID~~AGPSEvlViAD~~Anp~~vAaDLLaQAEH 254 (426)
T PRK12447 181 GVQAVAAMAYGTETIKPVDMLVGPGNAYVA------EAKRQLFGRVGIDLFAGPTETLVIADDTADPELVATDLLGQAEH 254 (426)
T ss_pred CHHHHHHHHcCCCCCCCCcEEECCCcHHHH------HHHHHhcCccCcCCCCCCceeEEEeCCCCCHHHHHHHHHHHhcc
Confidence 444444443 23689999988864332 22221 11211 112333 35556679999999999877665
Q ss_pred cCCCCccCCceEEEeCccHHHHHHHHHHHHhcccccCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCcEeeCCcccccC
Q 001665 474 AAGERCTALSTAVFVGSSVQWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVP 553 (1035)
Q Consensus 474 naGQ~C~a~~~vlV~~~i~~f~e~Lv~~~~~lkvG~p~d~~~~~Gpli~~~~~~rl~~~i~~av~~GAkvl~gG~~~~~p 553 (1035)
+..-.| +++..+. ++.+++.+++.+.- .-+ .+ .+.++.+.++
T Consensus 255 d~~a~~-----iLvT~s~-~la~~V~~~v~~ql-----------~~l-~r------~~i~~~sl~~-------------- 296 (426)
T PRK12447 255 GPNSPA-----VLITTSR-KLAEEVLAEIERLL-----------AIL-PT------ADVASAAWRD-------------- 296 (426)
T ss_pred CCCCce-----EEEECCH-HHHHHHHHHHHHHH-----------HhC-CH------HHHHHHHHHh--------------
Confidence 544322 4454432 44455554443210 000 00 1222222211
Q ss_pred CCCCCceeeceEEecCCCCCccccccccCcceeEEecCCHHHHHHHHHhcCCCcEEEEEcCCHHHHHHHHhc-cceeEEE
Q 001665 554 GYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNE-IEARLVG 632 (1035)
Q Consensus 554 ~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI~laN~~~~GLsasVfS~d~~~a~~~a~~-l~sG~V~ 632 (1035)
+| .|+-++|++||++++|..--= -+-|.++|. +.+..+ -.+|.|+
T Consensus 297 ---------------------------~g---~ii~v~~l~ea~~~~N~~APE-HLel~~~~~---~~~l~~i~nAGaiF 342 (426)
T PRK12447 297 ---------------------------YG---EVILCDDLEEMVAEADRYASE-HVQVMTEDP---DWFLENMTNYGALF 342 (426)
T ss_pred ---------------------------CC---EEEEECCHHHHHHHHHhhChH-heeehhCCH---HHHHhhcCccceec
Confidence 11 134568999999999985222 256788886 344443 4799999
Q ss_pred EcCCcCCCCC----CC----CCCCCCCcCcHHHHHhcceeeEEE
Q 001665 633 INVPVPSSFS----SI----NESGEFNFCGKSGVQFYTQIKTVA 668 (1035)
Q Consensus 633 IN~~~~~PfG----G~----g~SG~G~~~G~~g~~~ft~~k~v~ 668 (1035)
+....+.++| |- ..+|.+++.|..+.+.|..+-++.
T Consensus 343 lG~~sp~a~GDY~aGpNHvLPT~G~Ar~~sgLsv~~FlK~~s~~ 386 (426)
T PRK12447 343 LGERTNVAYGDKVIGTNHVLPTSGAARYTGGLWVGKFLKTVTYQ 386 (426)
T ss_pred cCCCCchhhhhcccCCCcccCCCcceeecCCCcHHHhccceeEE
Confidence 9765443333 21 224778888888999997765544
|
|
| >TIGR00069 hisD histidinol dehydrogenase | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.56 Score=54.59 Aligned_cols=284 Identities=16% Similarity=0.098 Sum_probs=154.9
Q ss_pred HHHHHHHHHHHHHHHHhhcCccccCCCCCCcceeeeccceeEEEECCC-C--cchhchHHHHHHHHhcCCEEE--EeCCC
Q 001665 300 VLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPF-N--FPDMTPLWMFSIAVTCGNTFI--LKPSE 374 (1035)
Q Consensus 300 V~~a~~~l~~~~~~a~~~~g~~~~~~~~g~~~~~~~ePlGVV~iI~P~-N--~Pl~~~~~~l~~ALaaGNaVV--lKPS~ 374 (1035)
+..+.+.++.+.... ....+.....+|.....++.|+.-|++..|. . ||-..+ -.+++|-.||..=| ..|..
T Consensus 53 i~~A~~~I~~fh~~q--~~~~~~~~~~~Gv~~g~~~~Pi~rvGlYVPGG~a~~pStvL-M~aiPAkvAGV~~Iv~~TPp~ 129 (393)
T TIGR00069 53 LELAAENIRAFHEAQ--LPRSWEVETEPGVILGQRVRPLERVGLYVPGGRAPYPSTVL-MTAIPAKVAGVKEIVVCTPPG 129 (393)
T ss_pred HHHHHHHHHHHHHHh--CCCCeEEecCCCeEEEEEEEEeheEEEEeCCCCCcchHHHH-HhhcchhhcCCCeEEEEeCCC
Confidence 445555666554321 1122333234565666789999999999997 3 444444 45678888887644 45553
Q ss_pred C-ChhHHHHHHHHHHHhCCCCCcEEEeecchhhHhhhh----cCCCccEEEEeccchHHHHHHHHHHhcC--Cceee-cC
Q 001665 375 K-NPGTSMILAALAMEAGLPDGVLNIVHGTNDVINHIC----DDEDIKAISFVASSTASVQMYARAAARG--KRVQS-NR 446 (1035)
Q Consensus 375 ~-ap~ta~~L~ell~eAGlP~gvv~vV~g~~e~~~~L~----~h~~vd~V~fTGS~~vG~~I~~aAa~~l--~Pv~l-El 446 (1035)
. .......|+ ....+|+.+= + --|+.....+|. .-|+||+|+=.|..-+. +|++. ..|-. -+
T Consensus 130 ~~g~i~p~iL~-AA~~~Gv~eI-y--~vGGAQAIAAlAyGTesIp~VDkIvGPGN~yV~------~AK~~v~g~V~ID~~ 199 (393)
T TIGR00069 130 KDGKINPAVLA-AAKLAGVDEV-Y--KVGGAQAIAALAYGTETVPKVDKIVGPGNIYVT------AAKKLVFGDVGIDMP 199 (393)
T ss_pred cCCCCCHHHHH-HHHHcCCCee-h--hcCCHHHHHHHHcCCCCCCCCcEEECCCcHHHH------HHHHHhcCccCcCCC
Confidence 2 112233333 4467776641 1 124444444443 23689999988864332 22221 01111 12
Q ss_pred CCcc--eEEEcCCCCHHHHHHHHHHHHhccCCCCccCCceEEEeCccHHHHHHHHHHHHhcccccCCCCCCCcCCCcCHH
Q 001665 447 GGKN--YAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWEDELVELAKALKVNVGTDASADVGPVVSVE 524 (1035)
Q Consensus 447 GGkn--p~IV~~dADld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~~f~e~Lv~~~~~lkvG~p~d~~~~~Gpli~~~ 524 (1035)
.|.+ .+|-|++||.+.+|.+++.-+=.+..-.| +++..+. ++.+++.+++.+.-. .+-
T Consensus 200 AGPSEvlViAD~~Anp~~iAaDLLaQAEHd~~a~~-----iLvT~s~-~la~~V~~~v~~ql~-----------~l~--- 259 (393)
T TIGR00069 200 AGPSEVLVIADETANPEFVAADLLSQAEHDPDAQA-----ILVTTSE-ELAEAVQEEIERQLA-----------TLP--- 259 (393)
T ss_pred CCCceEEEEeCCCCCHHHHHHHHHHHhccCCCCcE-----EEEECCH-HHHHHHHHHHHHHHH-----------hCC---
Confidence 2333 35556679999999998877655443222 4454432 444544444432100 000
Q ss_pred HHHHHHHHHHHHHHCCCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecCCHHHHHHHHHhcC
Q 001665 525 VKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNR 604 (1035)
Q Consensus 525 ~~~rl~~~i~~av~~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI~laN~~~ 604 (1035)
. .+.++.++++ +| .|+.++|++||++++|..-
T Consensus 260 r----~~i~~~al~~-----------------------------------------~g---~ii~v~~l~ea~~~~N~~A 291 (393)
T TIGR00069 260 R----REIARKSLED-----------------------------------------NG---AIILVDDLEEAIEISNDYA 291 (393)
T ss_pred h----HHHHHHHHHh-----------------------------------------CC---EEEEECCHHHHHHHHHhhC
Confidence 0 1222333211 11 1345689999999999842
Q ss_pred CCcEEEEEcCCHHHHHHHHhc-cceeEEEEcCCcCCCCC----CC----CCCCCCCcCcHHHHHhcceeeEEE
Q 001665 605 FVNGASIFTSSGLAARKFQNE-IEARLVGINVPVPSSFS----SI----NESGEFNFCGKSGVQFYTQIKTVA 668 (1035)
Q Consensus 605 ~GLsasVfS~d~~~a~~~a~~-l~sG~V~IN~~~~~PfG----G~----g~SG~G~~~G~~g~~~ft~~k~v~ 668 (1035)
- --+-|.++|.. .+..+ -++|.|++....+.++| |- ..+|.+++.+..+.+.|..+-++.
T Consensus 292 P-EHLel~~~~p~---~~l~~I~nAGaiFlG~~tp~a~GDY~aG~NHvLPT~G~Ar~~sgL~v~~F~K~~s~~ 360 (393)
T TIGR00069 292 P-EHLELQTKNPE---ELLPKIRNAGSIFLGPYTPEAAGDYAAGPNHVLPTGGTARFYSGLSVLDFLKRITVQ 360 (393)
T ss_pred h-HhheehhCCHH---HHHhhcCccceeccCCCCchhhhhccCCCCcccCCCcceeecCCccHHHhccceeEE
Confidence 2 12557777763 34433 47999999766443333 21 124678888888899997766554
|
This model describes a polypeptide sequence catalyzing the final step in histidine biosynthesis, found sometimes as an independent protein and sometimes as a part of a multifunctional protein. |
| >PRK00877 hisD bifunctional histidinal dehydrogenase/ histidinol dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.52 Score=55.43 Aligned_cols=285 Identities=17% Similarity=0.134 Sum_probs=154.3
Q ss_pred HHHHHHHHHHHHHHHHhhcCccccCCCCCCcceeeeccceeEEEECCC---CcchhchHHHHHHHHhcCCEEE--EeCCC
Q 001665 300 VLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPF---NFPDMTPLWMFSIAVTCGNTFI--LKPSE 374 (1035)
Q Consensus 300 V~~a~~~l~~~~~~a~~~~g~~~~~~~~g~~~~~~~ePlGVV~iI~P~---N~Pl~~~~~~l~~ALaaGNaVV--lKPS~ 374 (1035)
+..+.+.++.+...- .+..+.....+|...-..+.|+--|++..|. -||-..++ .+++|-.||..=| ..|..
T Consensus 85 i~~A~~~I~~Fh~~q--~~~~~~~~~~~Gv~~g~~~~Pi~~vG~YVPGG~a~ypStvLM-~aiPAkvAGV~~Iv~~TPp~ 161 (425)
T PRK00877 85 LEEAAENIRAFHEAQ--KPESWDVETAPGVRLGQRWRPIERVGLYVPGGKAAYPSSVLM-NAIPAKVAGVKEIVMVTPPP 161 (425)
T ss_pred HHHHHHHHHHHHHHh--CCCCeEEEecCCeEEEEEEEehHHeEEEccCCCCCchHHHHH-hhcchhhcCCCeEEEEeCCC
Confidence 344455555443211 1122333233555556789999999999997 35544444 5678999987544 45553
Q ss_pred CChhHHHHHHHHHHHhCCCCCcEEEeecchhhHhhhh----cCCCccEEEEeccchHHHHHHHHHHhc---CCceeecCC
Q 001665 375 KNPGTSMILAALAMEAGLPDGVLNIVHGTNDVINHIC----DDEDIKAISFVASSTASVQMYARAAAR---GKRVQSNRG 447 (1035)
Q Consensus 375 ~ap~ta~~L~ell~eAGlP~gvv~vV~g~~e~~~~L~----~h~~vd~V~fTGS~~vG~~I~~aAa~~---l~Pv~lElG 447 (1035)
........|+ ....+|+.+ ++. -|+.....+|. .-|+||+|+=.|..-+. +|+. +.--+=-+.
T Consensus 162 ~g~i~p~vL~-AA~~~Gv~e-Iy~--vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~------~AK~~v~g~V~ID~~A 231 (425)
T PRK00877 162 DGEINPAILA-AAALAGVDE-VYK--VGGAQAIAALAYGTESIPKVDKIVGPGNIYVT------AAKRLVFGVVGIDMIA 231 (425)
T ss_pred CCCCCHHHHH-HHHHcCCCe-eec--cCCHHHHHHHHcCCCCCCCCcEEECCCcHHHH------HHHHHHcCCcCcCCCC
Confidence 2222223333 446677654 111 14444444444 23689999988864321 2222 111111123
Q ss_pred Ccc--eEEEcCCCCHHHHHHHHHHHHhccCCCCccCCceEEEeCccHHHHHHHHHHHHhcccccCCCCCCCcCCCcCHHH
Q 001665 448 GKN--YAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWEDELVELAKALKVNVGTDASADVGPVVSVEV 525 (1035)
Q Consensus 448 Gkn--p~IV~~dADld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~~f~e~Lv~~~~~lkvG~p~d~~~~~Gpli~~~~ 525 (1035)
|.+ -+|-|++||.+.+|.+++.-+=.+..-.| +++..+. ++.+++.+++.+.- ..+
T Consensus 232 GPSEvlViAD~~Anp~~vAaDLLaQAEHd~~a~a-----iLvT~s~-~la~~V~~~v~~ql-----------~~l----- 289 (425)
T PRK00877 232 GPSEILVIADETADPDFVAADLLSQAEHDPDAQS-----ILVTTSE-ELAEAVAAEVERQL-----------ATL----- 289 (425)
T ss_pred CCceeEEEeCCCCCHHHHHHHHHHHhccCCCCcE-----EEEECCH-HHHHHHHHHHHHHH-----------HhC-----
Confidence 333 34446679999999999877665543222 4454432 44444444442210 000
Q ss_pred HHHHHHHHHHHHHCCCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecCCHHHHHHHHHhcCC
Q 001665 526 KDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRF 605 (1035)
Q Consensus 526 ~~rl~~~i~~av~~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI~laN~~~~ 605 (1035)
.| .+.+..++++ +| .|+-++|+|||++++|..--
T Consensus 290 -~r-~~ia~~sl~~-----------------------------------------~g---~iivv~~leeai~~~N~~AP 323 (425)
T PRK00877 290 -PR-AEIARASLEG-----------------------------------------QG---AIILVDDLEEAIELSNAYAP 323 (425)
T ss_pred -Ch-HHHHHHHHHh-----------------------------------------CC---EEEEECCHHHHHHHHHhhCh
Confidence 00 1222222211 11 13456899999999998422
Q ss_pred CcEEEEEcCCHHHHHHHHhccceeEEEEcCCcCCCCC----CC----CCCCCCCcCcHHHHHhcceeeEEE
Q 001665 606 VNGASIFTSSGLAARKFQNEIEARLVGINVPVPSSFS----SI----NESGEFNFCGKSGVQFYTQIKTVA 668 (1035)
Q Consensus 606 GLsasVfS~d~~~a~~~a~~l~sG~V~IN~~~~~PfG----G~----g~SG~G~~~G~~g~~~ft~~k~v~ 668 (1035)
--+-|.++|.... +..--.+|.|++....+.++| |- ..+|..++.|..+...|..+-++.
T Consensus 324 -EHLel~~~~p~~~--l~~I~nAGaiFlG~~tp~a~GDY~aGpNHvLPT~G~AR~~sgLsV~~F~K~~s~~ 391 (425)
T PRK00877 324 -EHLEIQTEDPRAL--LDRIRNAGAIFLGPYTPESLGDYAAGPNHVLPTSGTARFSSGLSVYDFLKRSSVI 391 (425)
T ss_pred -HheeehhCCHHHH--HhhcCccceeccCCCCchhhhhcccCCCcccCCCcceeecCCccHHHhccceeEE
Confidence 2256888886332 223347999999765443333 21 224778888889999998776654
|
|
| >COG0141 HisD Histidinol dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.29 Score=56.96 Aligned_cols=282 Identities=16% Similarity=0.148 Sum_probs=156.8
Q ss_pred HHHHHHHHHHHHHHHHhhc-CccccCCCCCCcceeeeccceeEEEECC---CCcchhchHHHHHHHHhcCCEE--EEeCC
Q 001665 300 VLFGLEVVEQACAVATLQI-GEFVPNALCGLDTYCFREPLGVCAGICP---FNFPDMTPLWMFSIAVTCGNTF--ILKPS 373 (1035)
Q Consensus 300 V~~a~~~l~~~~~~a~~~~-g~~~~~~~~g~~~~~~~ePlGVV~iI~P---~N~Pl~~~~~~l~~ALaaGNaV--VlKPS 373 (1035)
+..+.+.++.+.. .++ ..+.....+|.....++.|+--|++..| --||-..++ ..++|-.+|+.= +..|.
T Consensus 81 i~~A~~~I~~fH~---~Q~p~~~~~~~~~Gv~~g~~~~Pi~~VGlYVPGG~A~ypStvLM-~avPAkvAGv~~Iv~~tPp 156 (425)
T COG0141 81 LEVAAENIEAFHE---AQLPKDWLVETEPGVVLGQRWRPIERVGLYVPGGKAAYPSTVLM-NAVPAKVAGVEEIVVVTPP 156 (425)
T ss_pred HHHHHHHHHHHHH---hhCCCccceeccCCcEEEEEEEEhhheEEEccCCCcCChHHHHH-hhccHhhcCCceEEEECCC
Confidence 3445555554432 222 2343444566667778999999999999 566655555 467899999864 44555
Q ss_pred CCChhHHHHHHHHHHHhCCCCCcEEEeecchhhHhhhhcC----CCccEEEEeccchHHHHHHHHHHhcC---CceeecC
Q 001665 374 EKNPGTSMILAALAMEAGLPDGVLNIVHGTNDVINHICDD----EDIKAISFVASSTASVQMYARAAARG---KRVQSNR 446 (1035)
Q Consensus 374 ~~ap~ta~~L~ell~eAGlP~gvv~vV~g~~e~~~~L~~h----~~vd~V~fTGS~~vG~~I~~aAa~~l---~Pv~lEl 446 (1035)
...- ....+.-..+.+|+.+ +++ -|+.....+|.-. +.||+|+=.|..-+ .+|++. .--+=-.
T Consensus 157 ~~~g-v~p~iL~AA~~~Gv~e-Iy~--vGGAQAIAAlAYGTetV~~VdkIvGPGN~yV------taAKr~v~g~V~ID~~ 226 (425)
T COG0141 157 PKDG-VNPEILAAARLAGVDE-VYK--VGGAQAIAALAYGTETVPKVDKIVGPGNAYV------TAAKRLVSGVVGIDMI 226 (425)
T ss_pred CCCC-CCHHHHHHHHHhCcHH-HHH--ccCHHHHHHHHccCCcCCccCeeeCCCcHHH------HHHHHHhhCCcccCCC
Confidence 5422 2222222335556543 111 1455555566544 78999998886533 222221 1111111
Q ss_pred CCcc--eEEEcCCCCHHHHHHHHHHHHhccCCCCccCCceEEEeCccHHHHHHHHHHHHhcccccCCCCCCCcCCCcCHH
Q 001665 447 GGKN--YAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWEDELVELAKALKVNVGTDASADVGPVVSVE 524 (1035)
Q Consensus 447 GGkn--p~IV~~dADld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~~f~e~Lv~~~~~lkvG~p~d~~~~~Gpli~~~ 524 (1035)
.|.+ -+|-|++||.+.+|.+++.-+=.+-.- +.|++..+ .++.+++.+++.+.-. -+
T Consensus 227 AGPSEvlViAD~ta~p~~vA~DLLsQAEHd~~a-----~aiLvT~s-~~la~~v~~~v~~~l~-----------~l---- 285 (425)
T COG0141 227 AGPSEVLVIADETANPDFVAADLLSQAEHDPDA-----QAILVTDS-EELAEAVEAAVERQLE-----------TL---- 285 (425)
T ss_pred CCCceEEEEeCCCCCHHHHHHHHHHHhhcCCCc-----eEEEEeCc-HHHHHHHHHHHHHHHH-----------hc----
Confidence 2333 345566799999999988766554332 22455543 2455555555432200 00
Q ss_pred HHHHHHHHHHHHHHCCCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecCCHHHHHHHHHhcC
Q 001665 525 VKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNR 604 (1035)
Q Consensus 525 ~~~rl~~~i~~av~~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI~laN~~~ 604 (1035)
.+ .+.+..+.. -|| .|+.++|++||++++|..-
T Consensus 286 --~~-~ei~~~~l~-----------------------------------------~~g---~iilv~~l~ea~~~~N~~A 318 (425)
T COG0141 286 --PR-AEIARKALE-----------------------------------------NYG---AIILVDDLDEAVEISNEYA 318 (425)
T ss_pred --cH-HHHHHHHHH-----------------------------------------hCC---eEEEECCHHHHHHHHHhhC
Confidence 00 111222210 011 2456689999999999842
Q ss_pred CCcEEEEEcCCHHHHHHHHhc-cceeEEEEcCCcCCCCCCC--------CCCCCCCcCcHHHHHhcceeeEE
Q 001665 605 FVNGASIFTSSGLAARKFQNE-IEARLVGINVPVPSSFSSI--------NESGEFNFCGKSGVQFYTQIKTV 667 (1035)
Q Consensus 605 ~GLsasVfS~d~~~a~~~a~~-l~sG~V~IN~~~~~PfGG~--------g~SG~G~~~G~~g~~~ft~~k~v 667 (1035)
+--+-|.++|... +..+ -++|.|++....+.++|-+ ..+|+-++.+..+...|..+-++
T Consensus 319 -PEHLei~~~~p~~---~l~~I~nAGsIFlG~~sPe~~GDY~aG~NHVLPT~g~AR~~s~L~v~dF~K~~tv 386 (425)
T COG0141 319 -PEHLELQTENPRE---LLGKIRNAGSIFLGHYSPESLGDYAAGPNHVLPTSGTARFSSGLSVYDFLKRSTV 386 (425)
T ss_pred -hHhhhhhhcCHHH---HHHHhcccceeeecCCCCccccccccCCCccCCCCccchhcCCccHHHhhhHHHH
Confidence 2236778888643 3333 3799999998655444322 22577788888888888776544
|
|
| >PRK13770 histidinol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.22 E-value=2.1 Score=50.21 Aligned_cols=260 Identities=17% Similarity=0.112 Sum_probs=142.8
Q ss_pred CCCcceeeeccceeEEEECCC-Ccchh-chHHHHHHHHhcCCEEEE--eCCCCChhHHHHHHHHHHHhCCCCCcEEEeec
Q 001665 327 CGLDTYCFREPLGVCAGICPF-NFPDM-TPLWMFSIAVTCGNTFIL--KPSEKNPGTSMILAALAMEAGLPDGVLNIVHG 402 (1035)
Q Consensus 327 ~g~~~~~~~ePlGVV~iI~P~-N~Pl~-~~~~~l~~ALaaGNaVVl--KPS~~ap~ta~~L~ell~eAGlP~gvv~vV~g 402 (1035)
.|......+.|+--|++..|. .+|+. +.+-.+++|-.||+.=|+ .|..........|+ ....+|+.+ ++. -|
T Consensus 100 ~gv~~g~~~~Pi~rvGlYVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~~~i~p~iL~-Aa~~~Gv~e-Iy~--iG 175 (416)
T PRK13770 100 ESVECYEIYHPLESVGIYVPGGKASYPSTVLMTATLAQVAGVENIVVVTPPQPNGVSQEVLA-ACYITQVNQ-VFQ--VG 175 (416)
T ss_pred CCcEEEEEEeeeeeeEEEccCCCCCccHHHHHhhccHhhcCCCeEEEEeCcCCCCCCHHHHH-HHHHcCCCe-eec--cC
Confidence 444455679999999999995 44432 233457789999986554 45432112222333 346667654 111 14
Q ss_pred chhhHhhhh----cCCCccEEEEeccchHHHHHHHHHHhcC--Ccee---ecCCCcceEEEcCCCCHHHHHHHHHHHHhc
Q 001665 403 TNDVINHIC----DDEDIKAISFVASSTASVQMYARAAARG--KRVQ---SNRGGKNYAIIMPDASIDATLNALVSAGFG 473 (1035)
Q Consensus 403 ~~e~~~~L~----~h~~vd~V~fTGS~~vG~~I~~aAa~~l--~Pv~---lElGGknp~IV~~dADld~Aa~~Iv~s~f~ 473 (1035)
+.....+|. .-|+||+|+=.|..-+ .+|+.. ..|- +.+..--.+|-|++||.+..|..++.-+=.
T Consensus 176 GAQAIAAlAyGTetIp~VDkIvGPGN~yV------~~AK~~v~g~V~ID~~AGPSEvlViAD~~Anp~~iAaDLLaQAEH 249 (416)
T PRK13770 176 GAQSIAALTYGTETIPKVDKIVGPGNQFV------AYAKKYLFGQVGIDQIAGPTEIALIIDETADLDAIVYDVFAQAEH 249 (416)
T ss_pred CHHHHHHHHcCCCCCCCCcEEECCCcHHH------HHHHHHhcCCcCcCCCCCCceeEEEecCCCCHHHHHHHHHHHhcc
Confidence 444444443 2368999998885432 122221 0111 122223345556679999999998876655
Q ss_pred cCCCCccCCceEEEeCccHHHHHHHHHHHHhcccccCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCcEeeCCcccccC
Q 001665 474 AAGERCTALSTAVFVGSSVQWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVP 553 (1035)
Q Consensus 474 naGQ~C~a~~~vlV~~~i~~f~e~Lv~~~~~lkvG~p~d~~~~~Gpli~~~~~~rl~~~i~~av~~GAkvl~gG~~~~~p 553 (1035)
+..-. .++|..+. ++.+++.+++.+.- .-+-. .+.++.+.++
T Consensus 250 d~~a~-----~iLvT~s~-~la~~V~~ev~~ql-----------~~lpr-------~~i~~~al~~-------------- 291 (416)
T PRK13770 250 DELAR-----TYVISEDA-QVLKDLESRIAKAL-----------PNVDR-------YDIVSKSIAN-------------- 291 (416)
T ss_pred CCCCc-----EEEEeCCH-HHHHHHHHHHHHHH-----------HhCCh-------HHHHHHHHHh--------------
Confidence 44322 24454432 34444444432210 00000 1122222211
Q ss_pred CCCCCceeeceEEecCCCCCccccccccCcceeEEecCCHHHHHHHHHhcCCCcEEEEEcCCHHHHHHHHhcc-ceeEEE
Q 001665 554 GYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEI-EARLVG 632 (1035)
Q Consensus 554 ~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI~laN~~~~GLsasVfS~d~~~a~~~a~~l-~sG~V~ 632 (1035)
+ -.++-++|+|||++++|..--= -+-|.++|.. .+..++ .+|.|+
T Consensus 292 ---------------------------~---g~ii~v~~~eeai~~~N~~APE-HLel~~~~~~---~~l~~i~nAGaiF 337 (416)
T PRK13770 292 ---------------------------Q---HYLIHASNFDEACHVMNTIAPE-HASIQTVNPQ---PYIEKVKYVGALF 337 (416)
T ss_pred ---------------------------C---CEEEEECCHHHHHHHHHhhChH-hheehhCCHH---HHHhhCCEeceec
Confidence 1 1234568999999999985222 2567888863 344443 799999
Q ss_pred EcCCcCCCCCCC--------CCCCCCCcCcHHHHHhcceeeEEE
Q 001665 633 INVPVPSSFSSI--------NESGEFNFCGKSGVQFYTQIKTVA 668 (1035)
Q Consensus 633 IN~~~~~PfGG~--------g~SG~G~~~G~~g~~~ft~~k~v~ 668 (1035)
+....+.++|-+ ..+|..++.|..+...|..+-++.
T Consensus 338 lG~~sp~a~GDY~aGpNHvLPT~G~AR~~sgLsv~~FlK~~s~~ 381 (416)
T PRK13770 338 IGHYSPEVIGDYVAGPSHVLPTNRTARFTNGLSVNDFLTRNTVI 381 (416)
T ss_pred cCCCCchhhhccccCCCCcCCCCcceeccCCCcHHHeecceeeE
Confidence 976544333321 224677888888899998876654
|
|
| >cd06572 Histidinol_dh Histidinol dehydrogenase, HisD, E | Back alignment and domain information |
|---|
Probab=96.17 E-value=3.9 Score=47.93 Aligned_cols=285 Identities=17% Similarity=0.107 Sum_probs=152.9
Q ss_pred HHHHHHHHHHHHHHHHHhhcCc-cccCCCCCCcceeeeccceeEEEECCCC-cchh-chHHHHHHHHhcCCEEE--EeCC
Q 001665 299 DVLFGLEVVEQACAVATLQIGE-FVPNALCGLDTYCFREPLGVCAGICPFN-FPDM-TPLWMFSIAVTCGNTFI--LKPS 373 (1035)
Q Consensus 299 EV~~a~~~l~~~~~~a~~~~g~-~~~~~~~g~~~~~~~ePlGVV~iI~P~N-~Pl~-~~~~~l~~ALaaGNaVV--lKPS 373 (1035)
.+..+.+.++.+.. .+... +.....+|.....++.|+--|++..|.- +|+. +.+-.+++|-.||+.=| ..|.
T Consensus 56 ai~~A~~nI~~fh~---~q~~~~~~~~~~~G~~~g~~~~Pi~~vG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp 132 (390)
T cd06572 56 AIELAAENIRAFHE---AQLPKDWEVETEPGVVLGQRYRPIERVGLYVPGGTAPYPSTVLMLAIPAKVAGVKEIVVVTPP 132 (390)
T ss_pred HHHHHHHHHHHHHH---HhCCCCeEEEeCCCcEEEEEEEehhEEEEEecCCCCcchHHHHHhhcchhhcCCCeEEEEeCc
Confidence 34555566665543 22222 2222235666677899999999999964 4442 23345678888887544 4555
Q ss_pred CCC-hhHHHHHHHHHHHhCCCCCcEEEee-cchhhHhhhh----cCCCccEEEEeccchHHHHHHHHHHhcC--Cce-e-
Q 001665 374 EKN-PGTSMILAALAMEAGLPDGVLNIVH-GTNDVINHIC----DDEDIKAISFVASSTASVQMYARAAARG--KRV-Q- 443 (1035)
Q Consensus 374 ~~a-p~ta~~L~ell~eAGlP~gvv~vV~-g~~e~~~~L~----~h~~vd~V~fTGS~~vG~~I~~aAa~~l--~Pv-~- 443 (1035)
... ......|+ ....+|+.+ +.. |+.....+|. .-+.||+|+=.|..-+ .+|+.. ..| +
T Consensus 133 ~~~g~i~p~iL~-aa~~~Gv~e----iy~vGGaQAIAAlAyGTesi~~VDkIvGPGN~yV------~~AK~~v~g~V~ID 201 (390)
T cd06572 133 RKDGKINPAILA-AAKLAGVDE----IYKVGGAQAIAALAYGTETIPKVDKIVGPGNIYV------TAAKRLVSGDVGID 201 (390)
T ss_pred CCCCCCCHHHHH-HHHHcCCcE----EeccCCHHHHHHHHcCCcCCCCCCEeeCCchHHH------HHHHHHhcCCcCcc
Confidence 431 12222233 345666553 222 4444444443 3478999998885432 122221 011 1
Q ss_pred -ecCCCcceEEEcCCCCHHHHHHHHHHHHhccCCCCccCCceEEEeCccHHHHHHHHHHHHhcccccCCCCCCCcCCCcC
Q 001665 444 -SNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWEDELVELAKALKVNVGTDASADVGPVVS 522 (1035)
Q Consensus 444 -lElGGknp~IV~~dADld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~~f~e~Lv~~~~~lkvG~p~d~~~~~Gpli~ 522 (1035)
+.+..--.+|.|++||.+.+|.+++.-+=.+.--. .+++..+. ++.+++.+++.+..- -+-.
T Consensus 202 ~~AGPSEvlIiAD~~A~p~~vAaDLLaQAEH~~~a~-----aiLvT~s~-~la~~V~~~v~~ql~-----------~l~r 264 (390)
T cd06572 202 MPAGPSEVLVIADETANPEFVAADLLSQAEHDPDSQ-----AILVTTSE-ELAEAVEEEVERQLA-----------ELPR 264 (390)
T ss_pred CCCCCceEEEEeCCCCCHHHHHHHHHhhhccCCCCe-----EEEEECCH-HHHHHHHHHHHHHHH-----------hCCc
Confidence 12222333555667999999998887655442211 24454432 444444444432100 0000
Q ss_pred HHHHHHHHHHHHHHHHCCCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecCCHHHHHHHHHh
Q 001665 523 VEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNR 602 (1035)
Q Consensus 523 ~~~~~rl~~~i~~av~~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI~laN~ 602 (1035)
. +.++.+..+ --.++.++|++||++++|.
T Consensus 265 ~-------~~~~~~~~~--------------------------------------------~g~ii~~~~~~eai~~~N~ 293 (390)
T cd06572 265 R-------EIAAKSLLD--------------------------------------------YGAIILVDDLEEAIELANE 293 (390)
T ss_pred H-------HHHHHHHHh--------------------------------------------CCEEEEECCHHHHHHHHHh
Confidence 0 011111110 0124466899999999998
Q ss_pred cCCCcEEEEEcCCHHHHHHHHhccceeEEEEcCCcCCCCC----CC----CCCCCCCcCcHHHHHhcceeeEEE
Q 001665 603 NRFVNGASIFTSSGLAARKFQNEIEARLVGINVPVPSSFS----SI----NESGEFNFCGKSGVQFYTQIKTVA 668 (1035)
Q Consensus 603 ~~~GLsasVfS~d~~~a~~~a~~l~sG~V~IN~~~~~PfG----G~----g~SG~G~~~G~~g~~~ft~~k~v~ 668 (1035)
.-- --+-|.++|... .+..--.+|.|++....+.++| |- ..+|.+++.|..+...|..+-++.
T Consensus 294 ~AP-EHLel~~~~~~~--~l~~i~nAGsiFlG~~tp~a~GDY~aGpNHvLPT~G~Ar~~sgL~v~~F~K~~s~~ 364 (390)
T cd06572 294 YAP-EHLELQTEDPEE--LLEKIRNAGSIFLGPYTPEALGDYAAGPNHVLPTGGTARFYSGLSVDDFLKRITVQ 364 (390)
T ss_pred hch-hhheeHhcCHHH--HHhhCccceEEeecCCCchhhhccccCCCCccCCCcceeecCCCCHHHheecceeE
Confidence 422 236677788643 2333347999999876443333 21 124677888888899998776654
|
C 1.1.1.23. Histidinol dehydrogenase catalyzes the last two steps in the L-histidine biosynthesis pathway, which is conserved in bacteria, archaea, fungi, and plants. These last two steps are (i) the NAD-dependent oxidation of L-histidinol to L-histidinaldehyde, and (ii) the NAD-dependent oxidation of L-histidinaldehyde to L-histidine. In most fungi and in the unicellular choanoflagellate Monosiga bevicollis, the HisD domain is fused with units that catalyze the second and third biosynthesis steps in this same pathway. |
| >PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=95.39 E-value=0.042 Score=72.97 Aligned_cols=104 Identities=15% Similarity=0.135 Sum_probs=76.8
Q ss_pred CCCCCcceeeeccceeEEEECCCCcchhchHHHHHHHHhcCCEEEEeCCCCChhHHHHHHHHHHHhCCCCCcEEEeecch
Q 001665 325 ALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGTN 404 (1035)
Q Consensus 325 ~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~ALaaGNaVVlKPS~~ap~ta~~L~ell~eAGlP~gvv~vV~g~~ 404 (1035)
...|+.+..+..|.|+|+++++-. ..++.+++++|++||.||+..++. .. +++ ++||+.+.+.|.-.
T Consensus 1175 GPTGE~N~l~l~pRg~vLcl~~~~---~~~~~Ql~Aala~Gn~~v~~~~~~---~~----~~~--~~Lp~~v~~~v~~~- 1241 (1318)
T PRK11809 1175 GPTGERNTYTLLPRERVLCLADTE---QDALTQLAAVLAVGSQALWPDDAL---HR----ALV--AALPAAVQARIQLA- 1241 (1318)
T ss_pred CCCCCcceeeccCCCcEEEeCCCH---HHHHHHHHHHHHhCCEEEEeCCch---hH----HHH--HhccHHHHhHhhhc-
Confidence 347889999999999999998833 356789999999999998864432 22 222 56888887766321
Q ss_pred hhHhhhhcCCCccEEEEeccchHHHHHHHHHHhcCCcee
Q 001665 405 DVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQ 443 (1035)
Q Consensus 405 e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~l~Pv~ 443 (1035)
.........++.|.|.|.....+.+.++.|++.-|++
T Consensus 1242 --~~~~~~~~~~~avl~~G~~~~l~~~~~~LA~R~GaIv 1278 (1318)
T PRK11809 1242 --KDWQLADQPFDAVLFHGDSDQLRALCEQVAQRDGPIV 1278 (1318)
T ss_pred --cccccccCCccEEEEeCCHHHHHHHHHHHhcCCCCeE
Confidence 1222233579999999999999999998888765554
|
|
| >PRK13769 histidinol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.75 E-value=11 Score=43.89 Aligned_cols=272 Identities=14% Similarity=0.110 Sum_probs=143.0
Q ss_pred HHHHHHHHHHHHHHHHhhcCccccCCCCCCcceeeeccceeEEEECCCCcchhchHHHHHHHHhcCCEEEE--eCCCCCh
Q 001665 300 VLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFIL--KPSEKNP 377 (1035)
Q Consensus 300 V~~a~~~l~~~~~~a~~~~g~~~~~~~~g~~~~~~~ePlGVV~iI~P~N~Pl~~~~~~l~~ALaaGNaVVl--KPS~~ap 377 (1035)
+..+.+.++.+.... .+..+... .+|...-.++.|+--|++..|.-||-.. +-.+++|-.||..=|+ .|...
T Consensus 59 i~~a~~~I~~fh~~q--~~~~~~~~-~~Gv~~g~~~~Pi~rvG~YVPa~~pStv-LM~~iPAkvAGV~~Iv~~TPp~~-- 132 (368)
T PRK13769 59 ALEAAKSLEALYSRL--KPPEAVDF-YGGVLRSVFWKPVRRAALYVPARYVSTL-VMLAVPARAAGVEEIYVVTPPRG-- 132 (368)
T ss_pred HHHHHHHHHHHHHHh--CCCCeEec-CCCeEEEEEEeeeeeeEEEeccchHHHH-HHhhccHhhcCCCeEEEeCCCCC--
Confidence 445555565554321 11223222 3555556689999999999996555444 4457789999976544 44421
Q ss_pred hHHHHHHHHHHHhCCCCCcEEEeecchhhHhhhhcCCCccEEEEeccchHHHHHHHHHHhcCCceeecCCCcceEEEcCC
Q 001665 378 GTSMILAALAMEAGLPDGVLNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMPD 457 (1035)
Q Consensus 378 ~ta~~L~ell~eAGlP~gvv~vV~g~~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~aAa~~l~Pv~lElGGknp~IV~~d 457 (1035)
.....|+ .+..+|+.+ |- .-|+.....++.-.-+||+|+=.|..-+.. +|..-....-+=+--|----+||-++
T Consensus 133 i~p~vL~-aa~~~Gv~e--Iy-~vGGAQAIAa~a~gt~VDkIvGPGN~yV~~--AK~~v~g~V~ID~~AGPSEvlViAD~ 206 (368)
T PRK13769 133 VTGELLA-VAKELGVKG--VL-AIGGPHGLAYAVFHMGVDMVAGPGGLYVQA--AKYVLSQYVGIDGIEGPTELVVYAEG 206 (368)
T ss_pred CCHHHHH-HHHHcCCCe--ee-cccCHHHHHHHhcCCCcCEEECCCcHHHHH--HHHHHhCCcCCCCcCCCcceEEEcCC
Confidence 2233333 446677654 11 124444444555444899998888643321 11110011111111122333555556
Q ss_pred CCHHHHHHHHHHHHhccCCCCccCCceEEEeCccHHHHHHHHHHHHhcccccCCCCCCCcCCCcCHHHHHHHHHHHHHHH
Q 001665 458 ASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAV 537 (1035)
Q Consensus 458 ADld~Aa~~Iv~s~f~naGQ~C~a~~~vlV~~~i~~f~e~Lv~~~~~lkvG~p~d~~~~~Gpli~~~~~~rl~~~i~~av 537 (1035)
||.+.+|.+++.-+=.+..- ..+++..+. ++.+++.+++++. +.
T Consensus 207 a~p~~vAaDLLaQAEH~~~a-----~~iLvT~s~-~la~~V~~~v~~~---------------------------~~--- 250 (368)
T PRK13769 207 VPPEVAVRGALAQLEHGPTS-----FAYLLSTDA-ELLKAAEEIYRRE---------------------------RT--- 250 (368)
T ss_pred CCHHHHHHHHHHHhhcCCCC-----cEEEEECCH-HHHHHHHHHHHHH---------------------------HH---
Confidence 89888888887665443321 123444432 3444444333220 00
Q ss_pred HCCCcEeeCCcccccCCCCCCceeeceEEecCCCCCccccccccCcceeEEecCCHHHHHHHHHhcCCCcEEEEEcCCHH
Q 001665 538 DNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGL 617 (1035)
Q Consensus 538 ~~GAkvl~gG~~~~~p~~~~g~fv~PTIl~~v~~d~~i~~eEiFGPVL~V~~~~d~eeAI~laN~~~~GLsasVfS~d~~ 617 (1035)
. + .|- ..|+-++|++||++++|..--= -+-|.+.+ .
T Consensus 251 -~-~---------------------------------------~~~-~~iivv~~leeai~~~N~~APE-HLel~~~~-~ 286 (368)
T PRK13769 251 -S-S---------------------------------------MGP-LEVRKVAGVEEAVRFIDEIAPE-HLEVWGRR-E 286 (368)
T ss_pred -h-c---------------------------------------CCC-CeEEEECCHHHHHHHHHhhChH-heEeeCcH-H
Confidence 0 0 000 2356779999999999984211 13344422 2
Q ss_pred HHHHHHhccceeEEEEcCCcCCCCC----CC----CCCCCCCcCcHHHHHhcceeeEEE
Q 001665 618 AARKFQNEIEARLVGINVPVPSSFS----SI----NESGEFNFCGKSGVQFYTQIKTVA 668 (1035)
Q Consensus 618 ~a~~~a~~l~sG~V~IN~~~~~PfG----G~----g~SG~G~~~G~~g~~~ft~~k~v~ 668 (1035)
.+..--.+|.|+++.+ .++| |- ..+|.+++.|..+...|..+-++.
T Consensus 287 ---~~~~i~nAGsiFl~~p--~a~GDY~aGpNHvLPT~G~AR~~sgLsv~~FlK~~t~~ 340 (368)
T PRK13769 287 ---VAYRVRNVGAVSVNMP--SPYLDYVAGISHVLPTGGTARWRGIITPLTFMKPIGVA 340 (368)
T ss_pred ---HHhhCCccCChhcCCc--hhhhccccCCCCcCCCCcceeccCCCcHHHcccceeEE
Confidence 2223347999999664 2222 21 124677888888888887765543
|
|
| >PF15299 ALS2CR8: Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 8 | Back alignment and domain information |
|---|
Probab=92.51 E-value=0.71 Score=50.26 Aligned_cols=73 Identities=14% Similarity=0.238 Sum_probs=45.7
Q ss_pred EEEEEcc-CCC-CCCCCCCCCCCcccccCCHHHHHHHHHHHHcCCCH-HHHHHHHHHh-----CCC----------CCCc
Q 001665 91 WVLTIKN-GEH-NHEPFKDMSEHPYSRRFSEEEVKQIKLMTEAGIKP-RQVLKALKQS-----NPE----------LQST 152 (1035)
Q Consensus 91 W~i~~~~-~~H-NH~ps~~~~~h~~~Rrls~e~k~~I~~L~~~gv~p-rqIl~~Lr~~-----~p~----------~~~t 152 (1035)
|++..-. .+| +|+...... -...++.++....|..|...|+.. .+|...|+.- |.+ -.-|
T Consensus 132 ~yv~lP~~~~H~~H~~~~~~~--~~~q~~~~~v~~ki~eLv~~gv~~v~e~k~~l~~fV~~~lf~~~~~p~~~n~~y~Pt 209 (225)
T PF15299_consen 132 FYVQLPSPEEHSGHPIGQEAA--GLKQPLDPRVVEKIHELVAQGVTSVPEMKRHLKKFVEEELFKDQEPPPPTNRRYFPT 209 (225)
T ss_pred EEEECCChHhcCCCccccccc--cccccCCHHHHHHHHHHHHcccccHHHHHHHHHHHhhhhccCCCCCCCCCccccCCc
Confidence 4444432 367 788766432 223456789999999999999665 5566666332 211 3446
Q ss_pred chhhhhhHHHHhh
Q 001665 153 PRHLYNLKAKIRQ 165 (1035)
Q Consensus 153 ~kDI~N~r~k~rr 165 (1035)
.+||+|...+..+
T Consensus 210 ~~di~n~~~~~~~ 222 (225)
T PF15299_consen 210 DKDIRNHMYSAKK 222 (225)
T ss_pred hHHHHHHHHHHHh
Confidence 7889998777543
|
|
| >PF04500 FLYWCH: FLYWCH zinc finger domain; InterPro: IPR007588 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule | Back alignment and domain information |
|---|
Probab=89.62 E-value=0.57 Score=39.50 Aligned_cols=49 Identities=29% Similarity=0.418 Sum_probs=24.8
Q ss_pred cCcEEEEccccCCccEEEEEccCCcccCCCccccccccccccccccCCCceEeeeecCCcEEEEEccCCCCC
Q 001665 31 QGYVVTIKKSRKDRRVILGCDRGGVYRNRRKIDENKRKRKACSRLINCPFEAIGKKEDDVWVLTIKNGEHNH 102 (1035)
Q Consensus 31 ~GF~I~i~~S~~~k~v~~~C~rgG~yr~~~k~~~~~~~R~~~S~ktgCpf~i~~k~~~~~W~i~~~~~~HNH 102 (1035)
.||.....+.. ....+++|.+.. +.+|++++... ++.=.+.....+|||
T Consensus 14 ~Gy~y~~~~~~-~~~~~WrC~~~~--------------------~~~C~a~~~~~--~~~~~~~~~~~~HnH 62 (62)
T PF04500_consen 14 DGYRYYFNKRN-DGKTYWRCSRRR--------------------SHGCRARLITD--AGDGRVVRTNGEHNH 62 (62)
T ss_dssp TTEEEEEEEE--SS-EEEEEGGGT--------------------TS----EEEEE----TTEEEE-S---SS
T ss_pred CCeEEECcCCC-CCcEEEEeCCCC--------------------CCCCeEEEEEE--CCCCEEEECCCccCC
Confidence 56777666666 557888886653 25899999988 333445555589999
|
Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. C2H2-type (classical) zinc fingers (Znf) were the first class to be characterised. They contain a short beta hairpin and an alpha helix (beta/beta/alpha structure), where a single zinc atom is held in place by Cys(2)His(2) (C2H2) residues in a tetrahedral array. C2H2 Znf's can be divided into three groups based on the number and pattern of fingers: triple-C2H2 (binds single ligand), multiple-adjacent-C2H2 (binds multiple ligands), and separated paired-C2H2 []. C2H2 Znf's are the most common DNA-binding motifs found in eukaryotic transcription factors, and have also been identified in prokaryotes []. Transcription factors usually contain several Znf's (each with a conserved beta/beta/alpha structure) capable of making multiple contacts along the DNA, where the C2H2 Znf motifs recognise DNA sequences by binding to the major groove of DNA via a short alpha-helix in the Znf, the Znf spanning 3-4 bases of the DNA []. C2H2 Znf's can also bind to RNA and protein targets []. This entry represents a potential FLYWCH Zn-finger domain found in a number of eukaryotic proteins. FLYWCH is a C2H2-type zinc finger characterised by five conserved hydrophobic residues, containing the conserved sequence motif: F/Y-X(n)-L-X(n)-F/Y-X(n)-WXCX(6-12)CX(17-22)HXH where X indicates any amino acid. This domain was first characterised in Drosophila Modifier of mdg4 proteins, Mod(mgd4), putative chromatin modulators involved in higher order chromatin domains. Mod(mdg4) proteins share a common N-terminal BTB/POZ domain, but differ in their C-terminal region, most containing C-terminal FLYWCH zinc finger motifs []. The FLYWCH domain in Mod(mdg4) proteins has a putative role in protein-protein interactions; for example, Mod(mdg4)-67.2 interacts with DNA-binding protein Su(Hw) via its FLYWCH domain. FLYWCH domains have been described in other proteins as well, including suppressor of killer of prune, Su(Kpn), which contains 4 terminal FLYWCH zinc finger motifs in a tandem array and a C-terminal glutathione SH-transferase (GST) domain []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 2RPR_A. |
| >PF04684 BAF1_ABF1: BAF1 / ABF1 chromatin reorganising factor; InterPro: IPR006774 ABF1 is a sequence-specific DNA binding protein involved in transcription activation, gene silencing and initiation of DNA replication | Back alignment and domain information |
|---|
Probab=88.20 E-value=0.87 Score=53.29 Aligned_cols=54 Identities=19% Similarity=0.433 Sum_probs=48.9
Q ss_pred CCCCCCCHHHHHHHHHHHhhccCcEEEEccccCCccEEEEEccCCcccCCCccccccccccccccccCCCceEeeee
Q 001665 10 PPGTFQDREDLIKHVRDFGTNQGYVVTIKKSRKDRRVILGCDRGGVYRNRRKIDENKRKRKACSRLINCPFEAIGKK 86 (1035)
Q Consensus 10 p~~~F~S~eea~~~~~~~A~~~GF~I~i~~S~~~k~v~~~C~rgG~yr~~~k~~~~~~~R~~~S~ktgCpf~i~~k~ 86 (1035)
.+..|+|.|+-+..+++|-...-.-|+.+.|-+.|-++|.|.+. .|||+|.+..
T Consensus 24 ~~~~f~tl~~wy~v~ndyefq~rcpiilknsh~nkhftfachlk-----------------------~c~fkillsy 77 (496)
T PF04684_consen 24 QARKFPTLEAWYNVINDYEFQSRCPIILKNSHRNKHFTFACHLK-----------------------NCPFKILLSY 77 (496)
T ss_pred cccCCCcHHHHHHHHhhhhhhhcCceeecccccccceEEEeecc-----------------------CCCceeeeee
Confidence 35789999999999999999999999999999999999999774 6999997765
|
ABF1 is known to remodel chromatin, and it is proposed that it mediates its effects on transcription and gene expression by modifying local chromatin architecture []. These functions require a conserved stretch of 20 amino acids in the C-terminal region of ABF1 (amino acids 639 to 662 Saccharomyces cerevisiae (P14164 from SWISSPROT)) []. The N-terminal two thirds of the protein are necessary for DNA binding, and the N terminus (amino acids 9 to 91 in S. cerevisiae) is thought to contain a novel zinc-finger motif which may stabilise the protein structure [].; GO: 0003677 DNA binding, 0006338 chromatin remodeling, 0005634 nucleus |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 1035 | ||||
| 4e4g_A | 521 | Crystal Structure Of Putative Methylmalonate-Semial | 1e-99 | ||
| 1t90_A | 486 | Crystal Structure Of Methylmalonate Semialdehyde De | 7e-93 | ||
| 1a4s_A | 503 | Betaine Aldehyde Dehydrogenase From Cod Liver Lengt | 2e-54 | ||
| 2wox_A | 489 | Betaine Aldehyde Dehydrogenase From Pseudomonas Aer | 4e-54 | ||
| 2wme_A | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 4e-54 | ||
| 2xdr_A | 489 | Crystallographic Structure Of Betaine Aldehyde Dehy | 7e-54 | ||
| 3zqa_A | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 7e-53 | ||
| 2wme_C | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 9e-53 | ||
| 2opx_A | 479 | Crystal Structure Of Lactaldehyde Dehydrogenase Fro | 4e-50 | ||
| 3k2w_A | 497 | Crystal Structure Of Betaine-Aldehyde Dehydrogenase | 8e-50 | ||
| 2imp_A | 479 | Crystal Structure Of Lactaldehyde Dehydrogenase Fro | 1e-49 | ||
| 2hg2_A | 479 | Structure Of Lactaldehyde Dehydrogenase Length = 47 | 3e-49 | ||
| 2d4e_A | 515 | Crystal Structure Of The Hpcc From Thermus Thermoph | 2e-48 | ||
| 1bxs_A | 501 | Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad | 3e-47 | ||
| 3jz4_A | 481 | Crystal Structure Of E. Coli Nadp Dependent Enzyme | 8e-47 | ||
| 4a0m_A | 496 | Crystal Structure Of Betaine Aldehyde Dehydrogenase | 8e-47 | ||
| 3jz4_C | 481 | Crystal Structure Of E. Coli Nadp Dependent Enzyme | 8e-47 | ||
| 3r31_A | 517 | Crystal Structure Of Betaine Aldehyde Dehydrogenase | 2e-46 | ||
| 3iwk_A | 503 | Crystal Structure Of Aminoaldehyde Dehydrogenase 1 | 3e-46 | ||
| 3ek1_A | 504 | Crystal Structure Of Aldehyde Dehydrogenase From Br | 3e-46 | ||
| 1bi9_A | 499 | Retinal Dehydrogenase Type Two With Nad Bound Lengt | 4e-46 | ||
| 1o9j_A | 501 | The X-Ray Crystal Structure Of Eta-Crystallin Lengt | 9e-46 | ||
| 4fr8_A | 500 | Crystal Structure Of Human Aldehyde Dehydrogenase-2 | 1e-45 | ||
| 2onn_A | 500 | Arg475gln Mutant Of Human Mitochondrial Aldehyde De | 5e-45 | ||
| 1cw3_A | 494 | Human Mitochondrial Aldehyde Dehydrogenase Complexe | 5e-45 | ||
| 1o05_A | 500 | Apo Form Of Human Mitochondrial Aldehyde Dehydrogen | 6e-45 | ||
| 3n81_A | 500 | T244a Mutant Of Human Mitochondrial Aldehyde Dehydr | 6e-45 | ||
| 1nzw_A | 500 | Cys302ser Mutant Of Human Mitochondrial Aldehyde De | 6e-45 | ||
| 3n80_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase, Apo For | 1e-44 | ||
| 3ed6_A | 520 | 1.7 Angstrom Resolution Crystal Structure Of Betain | 1e-44 | ||
| 3rhm_A | 517 | Crystal Structure Of The E673q Mutant Of C-Terminal | 1e-43 | ||
| 2o2p_A | 517 | Crystal Structure Of The C-Terminal Domain Of Rat 1 | 1e-43 | ||
| 3i44_A | 497 | Crystal Structure Of Aldehyde Dehydrogenase From Ba | 2e-43 | ||
| 3rhj_A | 517 | Crystal Structure Of The E673a Mutant Of The C-Term | 2e-43 | ||
| 3pqa_A | 486 | Crystal Structure Of Glyceraldehyde-3-Phosphate Deh | 9e-43 | ||
| 3rhr_A | 517 | Crystal Structure Of The C707a Mutant Of The C-Term | 2e-42 | ||
| 1zum_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase Asian Va | 2e-42 | ||
| 3ifg_A | 484 | Crystal Structure Of Succinate-Semialdehyde Dehydro | 2e-42 | ||
| 4gnz_A | 517 | Crystal Structure Of The C707s Mutant Of C-terminal | 2e-42 | ||
| 3inl_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase Asian Va | 2e-42 | ||
| 3rhl_A | 517 | Crystal Structure Of The E673aC707A DOUBLE MUTANT O | 3e-42 | ||
| 1ag8_A | 499 | Aldehyde Dehydrogenase From Bovine Mitochondria Len | 3e-42 | ||
| 4i9b_A | 517 | Structure Of Aminoaldehyde Dehydrogenase 1 From Sol | 8e-42 | ||
| 4i8q_A | 514 | Structure Of The Aminoaldehyde Dehydrogenase 1 E260 | 1e-41 | ||
| 3iwj_A | 503 | Crystal Structure Of Aminoaldehyde Dehydrogenase 2 | 2e-41 | ||
| 1euh_A | 475 | Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase | 7e-41 | ||
| 3ty7_A | 478 | Crystal Structure Of Aldehyde Dehydrogenase Family | 9e-41 | ||
| 2id2_A | 475 | Gapn T244s Mutant X-Ray Structure At 2.5 A Length = | 1e-40 | ||
| 2esd_A | 475 | Crystal Structure Of Thioacylenzyme Intermediate Of | 1e-40 | ||
| 4i8p_A | 520 | Crystal Structure Of Aminoaldehyde Dehydrogenase 1a | 3e-40 | ||
| 1qi1_A | 475 | Ternary Complex Of An Nadp Dependent Aldehyde Dehyd | 1e-39 | ||
| 3u4j_A | 528 | Crystal Structure Of Nad-Dependent Aldehyde Dehydro | 3e-38 | ||
| 3prl_A | 505 | Crystal Structure Of Nadp-Dependent Glyceraldehyde- | 6e-38 | ||
| 3rh9_A | 506 | The Crystal Structure Of Oxidoreductase From Marino | 2e-37 | ||
| 4dal_A | 498 | Crystal Structure Of Putative Aldehyde Dehydrogenas | 2e-37 | ||
| 2w8n_A | 487 | The Crytal Structure Of The Oxidized Form Of Human | 1e-36 | ||
| 3b4w_A | 495 | Crystal Structure Of Mycobacterium Tuberculosis Ald | 3e-36 | ||
| 2w8p_A | 487 | The Crystal Structure Of Human C340a Ssadh Length = | 1e-35 | ||
| 4dng_A | 485 | Crystal Structure Of Putative Aldehyde Dehydrogenas | 6e-35 | ||
| 3efv_A | 462 | Crystal Structure Of A Putative Succinate-Semialdeh | 3e-34 | ||
| 1uzb_A | 516 | 1-pyrroline-5-carboxylate Dehydrogenase Length = 51 | 5e-34 | ||
| 2bhp_A | 516 | Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd | 2e-33 | ||
| 4f9i_A | 1026 | Crystal Structure Of Proline Utilization A (Puta) F | 2e-33 | ||
| 3qan_A | 538 | Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy | 4e-33 | ||
| 2bja_A | 516 | Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd | 4e-32 | ||
| 2jg7_A | 510 | Crystal Structure Of Seabream Antiquitin And Elucid | 2e-31 | ||
| 3rjl_A | 538 | Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy | 2e-31 | ||
| 3r64_A | 508 | Crystal Structure Of A Nad-Dependent Benzaldehyde D | 2e-30 | ||
| 1wnb_A | 495 | Escherichia Coli Ydcw Gene Product Is A Medium-Chai | 2e-29 | ||
| 1uxv_A | 501 | Structural Basis For Allosteric Regulation And Subs | 2e-29 | ||
| 1uxn_A | 501 | Structural Basis For Allosteric Regulation And Subs | 3e-29 | ||
| 1ky8_A | 501 | Crystal Structure Of The Non-Phosphorylating Glycer | 1e-28 | ||
| 3ju8_A | 490 | Crystal Structure Of Succinylglutamic Semialdehyde | 3e-28 | ||
| 3ros_A | 484 | Crystal Structure Of Nad-Dependent Aldehyde Dehydro | 2e-26 | ||
| 2j6l_A | 500 | Structure Of Aminoadipate-Semialdehyde Dehydrogenas | 4e-26 | ||
| 3lv1_A | 457 | Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehy | 5e-20 | ||
| 3haz_A | 1001 | Crystal Structure Of Bifunctional Proline Utilizati | 6e-20 | ||
| 3lns_A | 457 | Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehy | 8e-19 | ||
| 1ad3_A | 452 | Class 3 Aldehyde Dehydrogenase Complex With Nicotin | 8e-19 | ||
| 3sza_A | 469 | Crystal Structure Of Human Aldh3a1 - Apo Form Lengt | 2e-18 | ||
| 3v9j_A | 563 | Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylat | 9e-15 | ||
| 4h7n_A | 474 | The Structure Of Putative Aldehyde Dehydrogenase Pu | 1e-14 | ||
| 3v9g_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 8e-14 | ||
| 3v9h_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 2e-13 | ||
| 3v9i_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 4e-13 |
| >pdb|4E4G|A Chain A, Crystal Structure Of Putative Methylmalonate-Semialdehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 521 | Back alignment and structure |
|
| >pdb|1T90|A Chain A, Crystal Structure Of Methylmalonate Semialdehyde Dehydrogenase From Bacillus Subtilis Length = 486 | Back alignment and structure |
|
| >pdb|1A4S|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver Length = 503 | Back alignment and structure |
|
| >pdb|2WOX|A Chain A, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa With Nad(P)h-Catalytic Thiol Adduct. Length = 489 | Back alignment and structure |
|
| >pdb|2WME|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490 | Back alignment and structure |
|
| >pdb|2XDR|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa Length = 489 | Back alignment and structure |
|
| >pdb|3ZQA|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa In Complex With Nadph Length = 490 | Back alignment and structure |
|
| >pdb|2WME|C Chain C, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490 | Back alignment and structure |
|
| >pdb|2OPX|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From Escherichia Coli Length = 479 | Back alignment and structure |
|
| >pdb|3K2W|A Chain A, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From Pseudoalteromonas Atlantica T6c Length = 497 | Back alignment and structure |
|
| >pdb|2IMP|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E. Coli: The Ternary Complex With Product Bound (L)-Lactate And Nadh. Length = 479 | Back alignment and structure |
|
| >pdb|2HG2|A Chain A, Structure Of Lactaldehyde Dehydrogenase Length = 479 | Back alignment and structure |
|
| >pdb|2D4E|A Chain A, Crystal Structure Of The Hpcc From Thermus Thermophilus Hb8 Length = 515 | Back alignment and structure |
|
| >pdb|1BXS|A Chain A, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound Length = 501 | Back alignment and structure |
|
| >pdb|3JZ4|A Chain A, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481 | Back alignment and structure |
|
| >pdb|4A0M|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Spinach In Complex With Nad Length = 496 | Back alignment and structure |
|
| >pdb|3JZ4|C Chain C, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481 | Back alignment and structure |
|
| >pdb|3R31|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Agrobacterium Tumefaciens Length = 517 | Back alignment and structure |
|
| >pdb|3IWK|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From Pisum Sativum (Psamadh1) Length = 503 | Back alignment and structure |
|
| >pdb|3EK1|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Brucella Melitensis Biovar Abortus 2308 Length = 504 | Back alignment and structure |
|
| >pdb|1BI9|A Chain A, Retinal Dehydrogenase Type Two With Nad Bound Length = 499 | Back alignment and structure |
|
| >pdb|1O9J|A Chain A, The X-Ray Crystal Structure Of Eta-Crystallin Length = 501 | Back alignment and structure |
|
| >pdb|4FR8|A Chain A, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In Complex With Nitroglycerin Length = 500 | Back alignment and structure |
|
| >pdb|2ONN|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|1CW3|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nad+ And Mn2+ Length = 494 | Back alignment and structure |
|
| >pdb|1O05|A Chain A, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase Length = 500 | Back alignment and structure |
|
| >pdb|3N81|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|1NZW|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nadh And Mg2+ Length = 500 | Back alignment and structure |
|
| >pdb|3N80|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|3ED6|A Chain A, 1.7 Angstrom Resolution Crystal Structure Of Betaine Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus Length = 520 | Back alignment and structure |
|
| >pdb|3RHM|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase Length = 517 | Back alignment and structure |
|
| >pdb|2O2P|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase Length = 517 | Back alignment and structure |
|
| >pdb|3I44|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Bartonella Henselae At 2.0a Resolution Length = 497 | Back alignment and structure |
|
| >pdb|3RHJ|A Chain A, Crystal Structure Of The E673a Mutant Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517 | Back alignment and structure |
|
| >pdb|3PQA|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate Dehydrogenase Gapn From Methanocaldococcus Jannaschii Dsm 2661 Length = 486 | Back alignment and structure |
|
| >pdb|3RHR|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadph Length = 517 | Back alignment and structure |
|
| >pdb|1ZUM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|3IFG|A Chain A, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase From Burkholderia Pseudomallei, Part 1 Of 2 Length = 484 | Back alignment and structure |
|
| >pdb|4GNZ|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadp Length = 517 | Back alignment and structure |
|
| >pdb|3INL|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Complexed With Agonist Alda-1 Length = 500 | Back alignment and structure |
|
| >pdb|3RHL|A Chain A, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517 | Back alignment and structure |
|
| >pdb|1AG8|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria Length = 499 | Back alignment and structure |
|
| >pdb|4I9B|A Chain A, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum Lycopersium (slamadh1) With A Thiohemiacetal Intermediate Length = 517 | Back alignment and structure |
|
| >pdb|4I8Q|A Chain A, Structure Of The Aminoaldehyde Dehydrogenase 1 E260a Mutant From Solanum Lycopersicum (slamadh1-e260a) Length = 514 | Back alignment and structure |
|
| >pdb|3IWJ|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From Pisum Sativum (Psamadh2) Length = 503 | Back alignment and structure |
|
| >pdb|1EUH|A Chain A, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From Streptococcus Mutans Length = 475 | Back alignment and structure |
|
| >pdb|3TY7|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase Family Protein From Staphylococcus Aureus Length = 478 | Back alignment and structure |
|
| >pdb|2ID2|A Chain A, Gapn T244s Mutant X-Ray Structure At 2.5 A Length = 475 | Back alignment and structure |
|
| >pdb|2ESD|A Chain A, Crystal Structure Of Thioacylenzyme Intermediate Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475 | Back alignment and structure |
|
| >pdb|4I8P|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From Zea Mays (zmamadh1a) Length = 520 | Back alignment and structure |
|
| >pdb|1QI1|A Chain A, Ternary Complex Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475 | Back alignment and structure |
|
| >pdb|3U4J|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Sinorhizobium Meliloti Length = 528 | Back alignment and structure |
|
| >pdb|3PRL|A Chain A, Crystal Structure Of Nadp-Dependent Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus Halodurans C-125 Length = 505 | Back alignment and structure |
|
| >pdb|3RH9|A Chain A, The Crystal Structure Of Oxidoreductase From Marinobacter Aquaeolei Length = 506 | Back alignment and structure |
|
| >pdb|4DAL|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 498 | Back alignment and structure |
|
| >pdb|2W8N|A Chain A, The Crytal Structure Of The Oxidized Form Of Human Ssadh Length = 487 | Back alignment and structure |
|
| >pdb|3B4W|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Aldehyde Dehydrogenase Complexed With Nad+ Length = 495 | Back alignment and structure |
|
| >pdb|2W8P|A Chain A, The Crystal Structure Of Human C340a Ssadh Length = 487 | Back alignment and structure |
|
| >pdb|4DNG|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Bacillus Subtilis Subsp. Subtilis Str. 168 Length = 485 | Back alignment and structure |
|
| >pdb|3EFV|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde Dehydrogenase From Salmonella Typhimurium Lt2 With Bound Nad Length = 462 | Back alignment and structure |
|
| >pdb|1UZB|A Chain A, 1-pyrroline-5-carboxylate Dehydrogenase Length = 516 | Back alignment and structure |
|
| >pdb|2BHP|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nad. Length = 516 | Back alignment and structure |
|
| >pdb|4F9I|A Chain A, Crystal Structure Of Proline Utilization A (Puta) From Geobacter Sulfurreducens Pca Length = 1026 | Back alignment and structure |
|
| >pdb|3QAN|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Halodurans Length = 538 | Back alignment and structure |
|
| >pdb|2BJA|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nadh Length = 516 | Back alignment and structure |
|
| >pdb|2JG7|A Chain A, Crystal Structure Of Seabream Antiquitin And Elucidation Of Its Substrate Specificity Length = 510 | Back alignment and structure |
|
| >pdb|3RJL|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Licheniformis (Target Nysgrc-000337) Length = 538 | Back alignment and structure |
|
| >pdb|3R64|A Chain A, Crystal Structure Of A Nad-Dependent Benzaldehyde Dehydrogenase From Corynebacterium Glutamicum Length = 508 | Back alignment and structure |
|
| >pdb|1WNB|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain Aldehyde Dehydrogenase (Complexed With Nadh And Betaine Aldehyde) Length = 495 | Back alignment and structure |
|
| >pdb|1UXV|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501 | Back alignment and structure |
|
| >pdb|1UXN|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501 | Back alignment and structure |
|
| >pdb|1KY8|A Chain A, Crystal Structure Of The Non-Phosphorylating Glyceraldehyde-3- Phosphate Dehydrogenase Length = 501 | Back alignment and structure |
|
| >pdb|3JU8|A Chain A, Crystal Structure Of Succinylglutamic Semialdehyde Dehydrogenase From Pseudomonas Aeruginosa. Length = 490 | Back alignment and structure |
|
| >pdb|3ROS|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Lactobacillus Acidophilus Length = 484 | Back alignment and structure |
|
| >pdb|2J6L|A Chain A, Structure Of Aminoadipate-Semialdehyde Dehydrogenase Length = 500 | Back alignment and structure |
|
| >pdb|3LV1|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehydrogenase, With Bound Nadp+ Length = 457 | Back alignment and structure |
|
| >pdb|3HAZ|A Chain A, Crystal Structure Of Bifunctional Proline Utilization A (Puta) Protein Length = 1001 | Back alignment and structure |
|
| >pdb|3LNS|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehydrogenase, With Bound Nadp+ And Benzoate Adduct Length = 457 | Back alignment and structure |
|
| >pdb|1AD3|A Chain A, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide- Adenine-Dinucleotide Length = 452 | Back alignment and structure |
|
| >pdb|3SZA|A Chain A, Crystal Structure Of Human Aldh3a1 - Apo Form Length = 469 | Back alignment and structure |
|
| >pdb|3V9J|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate Dehydrogenase Complexed With Sulfate Ion Length = 563 | Back alignment and structure |
|
| >pdb|4H7N|A Chain A, The Structure Of Putative Aldehyde Dehydrogenase Puta From Anabaena Variabilis. Length = 474 | Back alignment and structure |
|
| >pdb|3V9G|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Length = 566 | Back alignment and structure |
|
| >pdb|3V9H|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352a Length = 566 | Back alignment and structure |
|
| >pdb|3V9I|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352l Length = 566 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 1035 | |||
| 4e4g_A | 521 | Methylmalonate-semialdehyde dehydrogenase; structu | 0.0 | |
| 1t90_A | 486 | MMSDH, probable methylmalonate-semialdehyde dehydr | 0.0 | |
| 3r64_A | 508 | NAD dependent benzaldehyde dehydrogenase; structur | 1e-113 | |
| 3qan_A | 538 | 1-pyrroline-5-carboxylate dehydrogenase 1; proline | 1e-110 | |
| 3prl_A | 505 | NADP-dependent glyceraldehyde-3-phosphate dehydro; | 1e-108 | |
| 1euh_A | 475 | NADP dependent non phosphorylating glyceraldehyde- | 1e-107 | |
| 3ju8_A | 490 | Succinylglutamic semialdehyde dehydrogenase; alpha | 1e-106 | |
| 3ty7_A | 478 | Putative aldehyde dehydrogenase SAV2122; structura | 1e-106 | |
| 3b4w_A | 495 | Aldehyde dehydrogenase; RV0223C-NAD complex, struc | 1e-105 | |
| 3r31_A | 517 | BADH, betaine aldehyde dehydrogenase; structural g | 1e-105 | |
| 1a4s_A | 503 | ALDH, betaine aldehyde dehydrogenase; oxidoreducta | 1e-104 | |
| 3i44_A | 497 | Aldehyde dehydrogenase; oxidoreductase, structural | 1e-104 | |
| 3ed6_A | 520 | Betaine aldehyde dehydrogenase; structural genomic | 1e-103 | |
| 2j6l_A | 500 | Aldehyde dehydrogenase family 7 member A1; NAD, re | 1e-103 | |
| 1uxt_A | 501 | Glyceraldehyde-3-phosphate dehydrogenase (NADP+); | 1e-103 | |
| 2d4e_A | 515 | 5-carboxymethyl-2-hydroxymuconate semialdehyde deh | 1e-102 | |
| 2ve5_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 1e-102 | |
| 1uzb_A | 516 | 1-pyrroline-5-carboxylate dehydrogenase; oxidoredu | 1e-102 | |
| 3pqa_A | 486 | Lactaldehyde dehydrogenase; structural genomics, p | 1e-101 | |
| 3iwj_A | 503 | Putative aminoaldehyde dehydrogenase; rossmann fol | 1e-100 | |
| 3u4j_A | 528 | NAD-dependent aldehyde dehydrogenase; PSI-biology, | 1e-99 | |
| 4dng_A | 485 | Uncharacterized aldehyde dehydrogenase ALDY; struc | 2e-98 | |
| 1wnd_A | 495 | Putative betaine aldehyde dehydrogenase; NADH, flu | 8e-98 | |
| 1bxs_A | 501 | Aldehyde dehydrogenase; retinal, class 1, tetramer | 3e-97 | |
| 4f3x_A | 498 | Putative aldehyde dehydrogenase; structural genomi | 1e-96 | |
| 2imp_A | 479 | Lactaldehyde dehydrogenase; protein-lactate-NADH t | 2e-96 | |
| 1o04_A | 500 | Aldehyde dehydrogenase, mitochondrial precursor; A | 4e-96 | |
| 2o2p_A | 517 | Formyltetrahydrofolate dehydrogenase; aldehyde deh | 8e-95 | |
| 2y53_A | 534 | Aldehyde dehydrogenase (BOX pathway); oxidoreducta | 1e-94 | |
| 3k2w_A | 497 | Betaine-aldehyde dehydrogenase; structural genomic | 6e-93 | |
| 3etf_A | 462 | Putative succinate-semialdehyde dehydrogenase; cen | 3e-90 | |
| 3ros_A | 484 | NAD-dependent aldehyde dehydrogenase; nysgrc, PSI- | 9e-90 | |
| 3ek1_A | 504 | Aldehyde dehydrogenase; ssgcid, oxidoreductase, st | 3e-87 | |
| 3jz4_A | 481 | Succinate-semialdehyde dehydrogenase [NADP+]; tetr | 7e-87 | |
| 3rh9_A | 506 | Succinate-semialdehyde dehydrogenase (NAD(P)(+)); | 2e-86 | |
| 3ifg_A | 484 | Succinate-semialdehyde dehydrogenase (NADP+); niai | 3e-86 | |
| 2w8n_A | 487 | Succinate-semialdehyde dehydrogenase, mitochondria | 2e-84 | |
| 4f9i_A | 1026 | Proline dehydrogenase/delta-1-pyrroline-5-carboxy | 2e-82 | |
| 1ez0_A | 510 | ALDH, aldehyde dehydrogenase; nucleotide binding d | 6e-79 | |
| 3haz_A | 1001 | Proline dehydrogenase; proline utilization A, PUTA | 3e-70 | |
| 3v4c_A | 528 | Aldehyde dehydrogenase (NADP+); structural genomic | 2e-68 | |
| 4e3x_A | 563 | Delta-1-pyrroline-5-carboxylate dehydrogenase, mit | 3e-60 | |
| 3my7_A | 452 | Alcohol dehydrogenase/acetaldehyde dehydrogenase; | 2e-59 | |
| 3k9d_A | 464 | LMO1179 protein, aldehyde dehydrogenase; structura | 9e-58 | |
| 3sza_A | 469 | Aldehyde dehydrogenase, dimeric NADP-preferring; A | 2e-28 | |
| 3lns_A | 457 | Benzaldehyde dehydrogenase; oxidoreductase, NADP+, | 1e-22 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-10 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 4e-09 |
| >4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} Length = 521 | Back alignment and structure |
|---|
Score = 757 bits (1958), Expect = 0.0
Identities = 204/494 (41%), Positives = 298/494 (60%), Gaps = 9/494 (1%)
Query: 200 NRVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTP 259
+ +FI GK V ++ NPAT EV V L + + AV++AK A P W T
Sbjct: 25 YELGHFIDGKRVAGTSGRVSNIFNPATGEVQGTVALASDADLAAAVESAKAAQPKWAATN 84
Query: 260 VATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIG 319
R R+ K +L+ ++++LA ++ E G T+ A+ D++ GLEV E + LQ
Sbjct: 85 PQRRARVFMKFVQLLNDNMNELAEMLSREHGKTIDDAKGDIVRGLEVCEFVIGIPHLQKS 144
Query: 320 EFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGT 379
EF A G+D Y R+P+G+ AGI PFNFP M P+WMF+ A+ CGN FILKPSE++P
Sbjct: 145 EFTEGAGPGIDMYSIRQPVGIGAGITPFNFPGMIPMWMFAPAIACGNAFILKPSERDPSV 204
Query: 380 SMILAALAMEAGLPDGVLNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAARG 439
+ LA L +EAGLP G+LN+V+G ++ I DI A+SFV S+ + +Y AA G
Sbjct: 205 PIRLAELMIEAGLPAGILNVVNGDKGAVDAILTHPDIAAVSFVGSTPIARYVYGTAAMNG 264
Query: 440 KRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV--QWEDE 497
KR Q G KN+ IIMPDA +D NAL+ AG+G+AGERC A+S AV VG + D+
Sbjct: 265 KRAQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGERCMAISVAVPVGEETANRLIDK 324
Query: 498 LVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYEN 557
LV + ++L++ TD AD+GPVV+ E + +I LI + ++ GA L++DGR+ + GYEN
Sbjct: 325 LVPMVESLRIGPYTDEKADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYEN 384
Query: 558 GNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGL 617
G+F+G + DVT +M+ YK EIFGPVL ++A + EEA+ + ++ + NG +I+T G
Sbjct: 385 GHFIGGCLFDDVTPDMDIYKTEIFGPVLSVVRARNYEEALSLPMKHEYGNGVAIYTRDGD 444
Query: 618 AARKFQNEIEARLVGINVPVP-----SSFSSINES--GEFNFCGKSGVQFYTQIKTVAQQ 670
AAR F + I +VG+NVP+P SF S G+ N G ++F+T+ KT+ +
Sbjct: 445 AARDFASRINIGMVGVNVPIPVPLAYHSFGGWKSSSFGDLNQHGTDSIKFWTRTKTITSR 504
Query: 671 WNDLPKLGMPLTMP 684
W K G ++P
Sbjct: 505 WPSGIKDGAEFSIP 518
|
| >1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} Length = 486 | Back alignment and structure |
|---|
Score = 735 bits (1900), Expect = 0.0
Identities = 186/482 (38%), Positives = 279/482 (57%), Gaps = 11/482 (2%)
Query: 200 NRVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTP 259
++ N+I G++V+ + DV+NPAT+EV QVP++T E+ A A AF W
Sbjct: 4 RKLKNYINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFKTWSKVA 63
Query: 260 VATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIG 319
V R RI+F Q+L+ + ++LA IT+E G K A +V G+E VE A +L +G
Sbjct: 64 VPRRARILFNFQQLLSQHKEELAHLITIENGKNTKEALGEVGRGIENVEFAAGAPSLMMG 123
Query: 320 EFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGT 379
+ + + ++ +R P+GV GI PFNFP M P WMF +A+ GNTFILKPSE+ P
Sbjct: 124 DSLASIATDVEAANYRYPIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILKPSERTPLL 183
Query: 380 SMILAALAMEAGLPDGVLNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAARG 439
+ L L +AGLP GV N+V+G +DV+N I + +IKAISFV S +Y + +
Sbjct: 184 TEKLVELFEKAGLPKGVFNVVYGAHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGSENL 243
Query: 440 KRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGS-SVQWEDEL 498
KRVQS G KN+ I++ DA+++ T+ +V A FG+AGERC A + + ++ +L
Sbjct: 244 KRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGIADEFMAKL 303
Query: 499 VELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENG 558
E +K+ G D +GPV+ + K + I+ ++ GA L+ DGR ++G
Sbjct: 304 QEKVADIKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRE---NVSDDG 360
Query: 559 NFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLA 618
FVGPTI +VT+ M +K+EIF PVL ++ +L+EAI++ N++ F NGA +FTS+ A
Sbjct: 361 YFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAIEIANKSEFANGACLFTSNSNA 420
Query: 619 ARKFQNEIEARLVGINVPVP-----SSFSSINES--GEFNFCGKSGVQFYTQIKTVAQQW 671
R F+ I+A ++GIN+ VP FS S G + GK V FYT+ K V ++
Sbjct: 421 IRYFRENIDAGMLGINLGVPAPMAFFPFSGWKSSFFGTLHANGKDSVDFYTRKKVVTARY 480
Query: 672 ND 673
Sbjct: 481 PA 482
|
| >3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} Length = 508 | Back alignment and structure |
|---|
Score = 358 bits (922), Expect = e-113
Identities = 124/482 (25%), Positives = 216/482 (44%), Gaps = 21/482 (4%)
Query: 201 RVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPV 260
+ IGG++V+ INP V ++ + + A +AAK+A W TP
Sbjct: 12 ATKHLIGGQWVEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKKAQAEWAATPA 71
Query: 261 ATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGE 320
A R I+++ EL+ +++ + E G+T A ++ + +++ + G
Sbjct: 72 AERSAIIYRAAELLEEHREEIVEWLIKESGSTRSKANLEITLAGNITKESASFPGRVHGR 131
Query: 321 FVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTS 380
P+ G + +R GV I P+NFP + + A+ GN ++KP+ P T
Sbjct: 132 ISPSNTPGKENRVYRVAKGVVGVISPWNFPLNLSIRSVAPALAVGNAVVIKPASDTPVTG 191
Query: 381 -MILAALAMEAGLPDGVLNIVHGTNDVI-NHICDDEDIKAISFVASSTASVQMYARAAAR 438
+I A + EAG+P GV++ V G I +H K ISF ST + A
Sbjct: 192 GVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTG-STPVGRRVGELAIN 250
Query: 439 G---KRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV--Q 493
G K V GG +++ DA IDA A F G+ C +++ V V ++V +
Sbjct: 251 GGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINR-VIVDAAVHDE 309
Query: 494 WEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVP 553
+ ++ VE K + + VGPV++ + I+ A GA++ ++G
Sbjct: 310 FLEKFVEAVKNIPTGDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGP----- 364
Query: 554 GYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFT 613
G V P + DVTS+ME +EEIFGP++ ++AD A ++ N + F A++++
Sbjct: 365 --IEGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKADDEAHAAELANASDFGLSAAVWS 422
Query: 614 SSGLAARKFQNEIEARLVGINVPVPSS-----FSSINESGEFNFCGKSGVQFYTQIKTVA 668
A +F +I++ +V IN + F SG F G ++ +T + +
Sbjct: 423 KDIDRAAQFALQIDSGMVHINDLTVNDEPHVMFGGSKNSGLGRFNGDWAIEEFTTDRWIG 482
Query: 669 QQ 670
+
Sbjct: 483 IK 484
|
| >3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A Length = 538 | Back alignment and structure |
|---|
Score = 350 bits (901), Expect = e-110
Identities = 119/484 (24%), Positives = 199/484 (41%), Gaps = 31/484 (6%)
Query: 204 NFIGGKFVDLRGSATIDVINPA-TQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVAT 262
I G+ V I NPA ++ V + + A+ +A AF W+N
Sbjct: 40 LIINGERVT--TEDKIQSWNPARKDQLVGSVSKANQDLAEKAIQSADEAFQTWRNVNPEE 97
Query: 263 RQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFV 322
R I+ K +IRR + + + E G K A D ++ +E
Sbjct: 98 RANILVKAAAIIRRRKHEFSAWLVHEAGKPWKEADADTAEAIDFLEYYARQMIELNRGKE 157
Query: 323 PNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMI 382
+ G F P+GV I P+NF + + GNT +LKP+ P +
Sbjct: 158 ILSRPGEQNRYFYTPMGVTVTISPWNFALAIMVGTAVAPIVTGNTVVLKPASTTPVVAAK 217
Query: 383 LAALAMEAGLPDGVLNIVHGTNDVI-NHICDDEDIKAISFVASSTASVQMYARAAARG-- 439
+ +AGLP GV+N V G+ + +++ D I+F S V++Y RAA
Sbjct: 218 FVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERAAVVRPG 277
Query: 440 ----KRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV--Q 493
KRV GGK+ ++ DA +D +++ + FG +G++C+A S + V +
Sbjct: 278 QNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSR-AVIHKDVYDE 336
Query: 494 WEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVP 553
++ V LAK L V T+ +GPV+ + ++I I+ G L+ G
Sbjct: 337 VLEKTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEGR-LMTGGE----G 391
Query: 554 GYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFT 613
G F+ PTI+ D+ +EEIFGPV+ +A+ + A+++ N + ++ T
Sbjct: 392 DSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKANDFDHALEIANNTEYGLTGAVIT 451
Query: 614 SSGLAARKFQNEIEARLVGINVP--------VPSSFSSINESGEFNF--CGKSGVQFYTQ 663
+ + + E + N P F SG + G + + Q
Sbjct: 452 RNRAHIEQAKREFHVGNLYFNRNCTGAIVGYHP--FGGFKMSG-TDSKAGGPDYLALHMQ 508
Query: 664 IKTV 667
KTV
Sbjct: 509 AKTV 512
|
| >3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* Length = 505 | Back alignment and structure |
|---|
Score = 346 bits (890), Expect = e-108
Identities = 134/483 (27%), Positives = 214/483 (44%), Gaps = 30/483 (6%)
Query: 201 RVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPV 260
+ G++V+ R I + PA+ +P + EE DA+ AK A WK P+
Sbjct: 11 NANILRNGEWVESRTGERISISAPASGVALGSIPALSQEEVNDAIQGAKDAQKIWKIRPI 70
Query: 261 ATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGE 320
R +++ +L+ + + I E K+A +V +++ A GE
Sbjct: 71 HERVDLLYAWADLLEERKEIIGELIMHEVAKPKKSAIGEVSRTADIIRHTADEALRLNGE 130
Query: 321 FVPNALCGLDT-----YCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEK 375
+ + REPLGV I PFN+P + A+ GNT + KP+ +
Sbjct: 131 TLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVNLAAAKIAPALVTGNTVVFKPATQ 190
Query: 376 NPGTSMILAALAMEAGLPDGVLNIVHGTNDVI-NHICDDEDIKAISFVASSTASVQMYAR 434
+ + + +AG P+G++ +V G VI +H+ + I I+F +T ++ +
Sbjct: 191 GSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERISEK 250
Query: 435 AAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-- 492
A V GGK+ AI++ DA + T + +VS F +G+RCTA+ VFV SV
Sbjct: 251 AKM--IPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKR-VFVQDSVAD 307
Query: 493 QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVV 552
Q + EL + L V D AD+ PV+ + I LI +A++NGA+LL +
Sbjct: 308 QLVANIKELVEQLTVGSPED-DADITPVIDEKSAAFIQGLIDDALENGATLLSGNK---- 362
Query: 553 PGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIF 612
GN + PT+L DVT M EE FGPVL ++ EAI + N++ + ASIF
Sbjct: 363 ---RQGNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDANEAISLSNQSDYGLQASIF 419
Query: 613 TSSGLAARKFQNEIEARLVGINVPVPSS-----FSSINESG---EFNFCGKSGVQFYTQI 664
T A +E V IN F + +SG + K + T+
Sbjct: 420 TKDTDRAINIGKHLEVGTVHINAKTERGPDHFPFLGVKKSGLGVQ---GIKPSLLSMTRE 476
Query: 665 KTV 667
+
Sbjct: 477 RVT 479
|
| >1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* Length = 475 | Back alignment and structure |
|---|
Score = 342 bits (879), Expect = e-107
Identities = 129/477 (27%), Positives = 221/477 (46%), Gaps = 26/477 (5%)
Query: 204 NFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATR 263
N++ G++ I + PA+ VP + EE +AK+A PAW+ R
Sbjct: 7 NYVNGEWKL--SENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIER 64
Query: 264 QRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVP 323
+ K+ +++ RD +K+ ++ E K+A +V+ E++ A GE +
Sbjct: 65 AAYLHKVADILMRDKEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVLE 124
Query: 324 NALCGLDT-----YCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPG 378
+ REP+G+ I PFN+P + A+ GN KP +
Sbjct: 125 GGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSI 184
Query: 379 TSMILAALAMEAGLPDGVLNIVHGTNDVI-NHICDDEDIKAISFVASSTASVQMYARAAA 437
+ ++LA EAGLP GV N + G I ++I + + + I+F S+ ++ A
Sbjct: 185 SGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAGM 244
Query: 438 RGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV--QWE 495
+ + GGK+ AI++ DA ++ T +++ FG +G+RCTA+ V V SV +
Sbjct: 245 --RPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKR-VLVMESVADELV 301
Query: 496 DELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGY 555
+++ E AL + D AD+ P++ + D + LI +A D GA+ L + +
Sbjct: 302 EKIREKVLALTIGNPED-DADITPLIDTKSADYVEGLINDANDKGATALTEIK------- 353
Query: 556 ENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSS 615
GN + P + VT++M EE FGPVL ++ S+EEAI++ N++ + ASIFT+
Sbjct: 354 REGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTND 413
Query: 616 GLAARKFQNEIEARLVGINVPVPSS-----FSSINESGEFNFCGKSGVQFYTQIKTV 667
A ++E V IN F +SG K ++ T +K+V
Sbjct: 414 FPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSV 470
|
| >3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} Length = 490 | Back alignment and structure |
|---|
Score = 339 bits (872), Expect = e-106
Identities = 108/441 (24%), Positives = 191/441 (43%), Gaps = 13/441 (2%)
Query: 201 RVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPV 260
+++I G+++ +G T++ ++P Q V + AV AA+ AFPAW P+
Sbjct: 5 MSTHYIAGQWLAGQG-ETLESLDPVGQGVVWSGRGADATQVDAAVCAAREAFPAWARRPL 63
Query: 261 ATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGE 320
R ++ + ++ D+LA I E G L + +V + V + + GE
Sbjct: 64 EQRIELLERFAATLKSRADELARVIGEETGKPLWESATEVTSMVNKVAISVQAFRERTGE 123
Query: 321 FVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTS 380
L +P GV A P+NFP P A+ GN + KPSE P +
Sbjct: 124 -KSGPLADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPALLAGNCVVFKPSELTPKVA 182
Query: 381 MILAALAMEAGLPDGVLNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAAR-G 439
+ ++AGLP GVLN+V G + + + + F SS ++++ +
Sbjct: 183 ELTLKAWIQAGLPAGVLNLVQGGRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGGQPQ 242
Query: 440 KRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWE---D 496
K + GG N ++ A +DA + ++ + F +AG+RCT + + V +
Sbjct: 243 KILALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTC-ARRLLVPQGAWGDALLA 301
Query: 497 ELVELAKALKVNVGTDASA-DVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGY 555
LV ++ L+V + A +G V+S+ + + + ++ + GA LL
Sbjct: 302 RLVAVSATLRVGRFDEQPAPFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMT----QPI 357
Query: 556 ENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSS 615
+ + P IL DV++ E EE FGP+L ++ AI+ N ++ A + + S
Sbjct: 358 DGAALLTPGIL-DVSAVAERPDEEFFGPLLQVIRYSDFAAAIREANATQYGLAAGLLSDS 416
Query: 616 GLAARKFQNEIEARLVGINVP 636
+F E A +V N
Sbjct: 417 RERFEQFLVESRAGIVNWNKQ 437
|
| >3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} Length = 478 | Back alignment and structure |
|---|
Score = 337 bits (868), Expect = e-106
Identities = 134/474 (28%), Positives = 216/474 (45%), Gaps = 20/474 (4%)
Query: 205 FIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQ 264
+I G++V+ + TI+VINPAT+EV +V + AV+AA + +++T V RQ
Sbjct: 11 YINGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYLEFRHTSVKERQ 70
Query: 265 RIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQR-DVLFGLEVVEQACAVATLQIGEFVP 323
++ K+ + D + IT E G L ++R GL A E
Sbjct: 71 ALLDKIVKEYENRKDDIVQAITDELGAPLSLSERVHYQMGLNHFVAARDALDNYEFEERR 130
Query: 324 NALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMIL 383
D +E +GV I P+NFP + A G+ +LKPSE+ P ++IL
Sbjct: 131 G-----DDLVVKEAIGVSGLITPWNFPTNQTSLKLAAAFAAGSPVVLKPSEETPFAAVIL 185
Query: 384 AALAMEAGLPDGVLNIVHGTNDVI-NHICDDEDIKAISFVASSTASVQMYARAAARGKRV 442
A + + G+P GV N+V+G + N + + ++ +SF S ++ +AA K+V
Sbjct: 186 AEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIMEKAAKDFKKV 245
Query: 443 QSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV--QWEDELVE 500
GGK+ I++ D I A G+ CTA T V V + + + EL E
Sbjct: 246 SLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAG-TRVLVPNKIKDAFLAELKE 304
Query: 501 LAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNF 560
++V + VGP++S + DQ+ I ++ GA L G G E G F
Sbjct: 305 QFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPG-KPEGLEKGYF 363
Query: 561 VGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAAR 620
PTI +V + M +EEIFGPV+ + + L+EAI++ N ++ +
Sbjct: 364 ARPTIFINVDNQMTIAQEEIFGPVMSVITYNDLDEAIQIANDTKYGLAGYVIGKDKETLH 423
Query: 621 KFQNEIEARLVGINVPVPSS---FSSINESG---EFNFCGKSGVQFYTQIKTVA 668
K IEA V IN F +SG E+ G G++ + ++K++A
Sbjct: 424 KVARSIEAGTVEINEAGRKPDLPFGGYKQSGLGREW---GDYGIEEFLEVKSIA 474
|
| >3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} Length = 495 | Back alignment and structure |
|---|
Score = 337 bits (868), Expect = e-105
Identities = 133/474 (28%), Positives = 210/474 (44%), Gaps = 18/474 (3%)
Query: 205 FIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFP--AWKNTPVAT 262
FIGGK+ S I+V PAT E +VP+ + AV AA+ AF W +TP
Sbjct: 12 FIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPSTPPHE 71
Query: 263 RQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQR-DVLFGLEVVEQACAVATLQIGEF 321
R ++ +++ D + E G + + + + A
Sbjct: 72 RAAVIAAAVKMLAERKDLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWTE 131
Query: 322 VPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSM 381
G + REP+GV I +N P + + A+ G T +LKP+ + P T+
Sbjct: 132 TRTGSYGQ-SIVSREPVGVVGAIVAWNVPLFLAVNKIAPALLAGCTIVLKPAAETPLTAN 190
Query: 382 ILAALAMEAGLPDGVLNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAARGKR 441
LA + E GLP+GVL++V G + + + DI +F SS ++ RAA K
Sbjct: 191 ALAEVFAEVGLPEGVLSVVPGGIETGQALTSNPDIDMFTFTGSSAVGREVGRRAAEMLKP 250
Query: 442 VQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV--QWEDELV 499
GGK+ AII+ D + A + +V +G AG+ C T + S + +
Sbjct: 251 CTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQ-TRILAPRSRYDEIVAAVT 309
Query: 500 ELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGN 559
AL V +D +A +GP++S + + ++ I ++ GA L+ G G +NG
Sbjct: 310 NFVTALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGG--RPEGLDNGF 367
Query: 560 FVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAA 619
F+ PT+ DV + M +EEIFGPVL + D+ E+AI + N + + S++T+
Sbjct: 368 FIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEEDAIAIANDSVYGLAGSVWTTDVPKG 427
Query: 620 RKFQNEIEARLVGINVPVPSS---FSSINESG---EFNFCGKSGVQFYTQIKTV 667
K +I GIN F SG E G GV+ +TQ K+V
Sbjct: 428 IKISQQIRTGTYGINWYAFDPGSPFGGYKNSGIGREN---GPEGVEHFTQQKSV 478
|
| >3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} Length = 517 | Back alignment and structure |
|---|
Score = 336 bits (865), Expect = e-105
Identities = 137/504 (27%), Positives = 234/504 (46%), Gaps = 23/504 (4%)
Query: 194 SPNIDNNRVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFP 253
+P + S+FI G +V+ + I PAT E+ +++ T + A+ +AKRA
Sbjct: 7 TPLKAQPKASHFIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRAQK 66
Query: 254 AWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQR-DVLFGLEVVEQACA 312
W R RI+ + +++R D L+ T++ G ++ D G + E
Sbjct: 67 EWAAMSPMARGRILKRAADIMRERNDALSTLETLDTGKPIQETIVADPTSGADAFEFFGG 126
Query: 313 VATLQI-GEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILK 371
+A + G+++P G Y R PLGVC GI +N+P W + A+ GN + K
Sbjct: 127 IAPSALNGDYIPLG--GDFAYTKRVPLGVCVGIGAWNYPQQIACWKAAPALVAGNAMVFK 184
Query: 372 PSEKNPGTSMILAALAMEAGLPDGVLNIVHGTNDVINHICDDEDIKAISFVASSTASVQM 431
PSE P ++ +A + +EAGLP G+ N++ G D + + D+ +S S + +
Sbjct: 185 PSENTPLGALKIAEILIEAGLPKGLFNVIQGDRDTGPLLVNHPDVAKVSLTG-SVPTGRK 243
Query: 432 YARAAARG-KRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGS 490
A AAA K V GGK+ I+ DA I++ + + F ++G+ C+ T VFV
Sbjct: 244 VAAAAAGHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSN-GTRVFVQK 302
Query: 491 SV--QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGR 548
++ + L +A+ + D + +GP+VS ++++ I+ GA+L+ G
Sbjct: 303 KAKARFLENLKRRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGG 362
Query: 549 NIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNG 608
G +V PT+ DVT +M +EEIFGPV+ + D +E + N F
Sbjct: 363 IPNNVA-GEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFDDEDEVLARANATEFGLA 421
Query: 609 ASIFTSSGLAARKFQNEIEARLVGIN----VPVPSSFSSINESG---EFNFCGKSGVQFY 661
+FT+ A + + +EA + IN PV F +SG E + ++ Y
Sbjct: 422 GGVFTADLARAHRVVDGLEAGTLWINTYNLCPVEIPFGGSKQSGFGRE---NSAAALEHY 478
Query: 662 TQIKTVAQQWNDLPKLGMPLTMPL 685
+++KTV + K+ P L
Sbjct: 479 SELKTV---YVSTGKVDAPYAENL 499
|
| >1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* Length = 503 | Back alignment and structure |
|---|
Score = 334 bits (858), Expect = e-104
Identities = 146/498 (29%), Positives = 233/498 (46%), Gaps = 25/498 (5%)
Query: 186 TSASPSGVSPNIDNNRVSNFIGGKFVDLRGSATID-VINPATQEVGSQVPLTTYEEFKDA 244
+ PS + ++ N+ GG+ + + AT + V PAT V Q+ EE A
Sbjct: 4 VDSMPSASTGSVVVTDDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQA 63
Query: 245 VDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGL 304
V +A+ A+ W R R+M + +IR D +A + G T+ A+ D+
Sbjct: 64 VQSAQAAYLKWSKMAGIERSRVMLEAARIIRERRDNIAKLEVINNGKTITEAEYDIDAAW 123
Query: 305 EVVEQACAVATLQIGEFVP---NALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIA 361
+ +E +A G+ + A Y REPLGVCAGI +N+P M W + A
Sbjct: 124 QCIEYYAGLAPTLSGQHIQLPGGAFA----YTRREPLGVCAGILAWNYPFMIAAWKCAPA 179
Query: 362 VTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGTNDVINHICDDEDIKAISF 421
+ CGN + KPS P T +ILA + EAG+P G++N+V G + + +C ++ +SF
Sbjct: 180 LACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQGGAETGSLLCHHPNVAKVSF 239
Query: 422 VASSTASVQMYARAAARG-KRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCT 480
S + + +A+ K V GGK+ +I D ++ + + A F G+ CT
Sbjct: 240 TG-SVPTGKKVMEMSAKTVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCT 298
Query: 481 ALSTAVFVGSSV--QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVD 538
T VFV + Q+ +E+V+ KA+ V +G ++S D++ + A
Sbjct: 299 N-GTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKK 357
Query: 539 NGASLLLDGRNIVV--PGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEA 596
GA +L G + P +NG F+ P +L + +M C KEEIFGPV+ + D+ EE
Sbjct: 358 EGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEV 417
Query: 597 IKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGIN----VPVPSSFSSINESG---E 649
++ N F + +FT A + +EA IN PV F SG E
Sbjct: 418 LQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSISPVEVPFGGYKMSGFGRE 477
Query: 650 FNFCGKSGVQFYTQIKTV 667
G++ V +Y+Q+KTV
Sbjct: 478 ---NGQATVDYYSQLKTV 492
|
| >3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} Length = 497 | Back alignment and structure |
|---|
Score = 333 bits (856), Expect = e-104
Identities = 131/493 (26%), Positives = 220/493 (44%), Gaps = 17/493 (3%)
Query: 186 TSASPSGVSPNIDNNRVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAV 245
+ P N+ +I G + D + VI+P+T+E + + L + + A+
Sbjct: 10 GTLEAQTQGPGSMLNKRKFYINGLWDDPSTPHDLYVIDPSTEEACAVISLGSTRDADKAI 69
Query: 246 DAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQR-DVLFGL 304
+AAK+AF WK T R + K+ E+ + +A I++E G + A G
Sbjct: 70 NAAKKAFQTWKTTSPHERLGFVEKILEIYEKRSSDMAKTISMEMGAPIDMALNAQTATGS 129
Query: 305 EVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTC 364
+ + + +GV I P+N+P A+
Sbjct: 130 SHIRNFIKAYKEFSFQEALIEGNEQ-AILHYDAIGVVGLITPWNWPMNQVTLKVIPALLA 188
Query: 365 GNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGTNDVI-NHICDDEDIKAISFVA 423
G T +LKPSE P ++M+ A + EA LP GV N+++G + +++ D++ ISF
Sbjct: 189 GCTMVLKPSEIAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTG 248
Query: 424 SSTASVQMYARAAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALS 483
S+ A + A+ KRV GGK II DA IDA V F +G+ C A
Sbjct: 249 STRAGKDISKNASNTLKRVCLELGGKGANIIFADADIDALQRG-VRHCFYNSGQSCNAP- 306
Query: 484 TAVFVGSSV--QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGA 541
T + V ++ + ++A+ +V G +GPVVS E D+I LIQ+ +D GA
Sbjct: 307 TRMLVEQAIYDKAIKTAKDIAEKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGA 366
Query: 542 SLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVN 601
+L+ G + G E G +V PT+ DV +M ++EEIFGPVL + ++ +EA+ + N
Sbjct: 367 TLVTGGTG-LPMGMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNTEDEAVTLAN 425
Query: 602 RNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPVPSS---FSSINESG---EFNFCGK 655
+ I + R+ ++ + +V +N F + SG E G
Sbjct: 426 DTEYGLTNYIQSQDRSKCRRIAAQVRSGMVEVNGHELPGGSYFGGVKFSGRAREG---GL 482
Query: 656 SGVQFYTQIKTVA 668
G++ + K ++
Sbjct: 483 WGIKEFLDTKAIS 495
|
| >3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* Length = 520 | Back alignment and structure |
|---|
Score = 332 bits (855), Expect = e-103
Identities = 128/505 (25%), Positives = 244/505 (48%), Gaps = 22/505 (4%)
Query: 180 RSTPVNTSASPSGVSPNIDNNRVSN----FIGGKFVDLRGSATIDVINPATQEVGSQVPL 235
S+ V+ N +I G++V+ T D+INP QEV V
Sbjct: 7 HSSGVDLGTENLYFQSNAMELLKHLSQRQYIDGEWVESANKNTRDIINPYNQEVIFTVSE 66
Query: 236 TTYEEFKDAVDAAKRAF--PAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTL 293
T E+ + A+ AA+RAF W TR + + + + I+ + LA T++ G TL
Sbjct: 67 GTKEDAERAILAARRAFESGEWSQETAETRGKKVRAIADKIKEHREALARLETLDTGKTL 126
Query: 294 KAAQRDVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMT 353
+ + D+ V +A GE + + + ++ +EP+GV I P+N+P +
Sbjct: 127 EESYADMDDIHNVFMYFAGLADKDGGEMIDSPIPDTESKIVKEPVGVVTQITPWNYPLLQ 186
Query: 354 PLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGT-NDVINHICD 412
W + A+ G + ++KPSE P T++ + L E G P G +N++ G ++V + +
Sbjct: 187 ASWKIAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSG 246
Query: 413 DEDIKAISFVASSTASVQMYARAAARG-KRVQSNRGGKNYAIIMPDASIDATLNALVSAG 471
+++ +SF + + + AA + GGKN II DA + ++ ++ G
Sbjct: 247 HKEVDLVSFTGG-IETGKHIMKNAANNVTNIALELGGKNPNIIFDDADFELAVDQALNGG 305
Query: 472 FGAAGERCTALSTAVFVGSSV--QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQI 529
+ AG+ C+A + + V +S+ ++E L++ K +K+ G DA ++GPV+S E +++I
Sbjct: 306 YFHAGQVCSA-GSRILVQNSIKDKFEQALIDRVKKIKLGNGFDADTEMGPVISTEHRNKI 364
Query: 530 SRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQ 589
+ A GA++ + G+ ++G F PT++ + ++M +EE+FGPV+
Sbjct: 365 ESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEG 424
Query: 590 ADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGIN----VPVPSSFSSIN 645
++ +EAI++ N + + ++F+ A++ N+++ V IN + +
Sbjct: 425 FETEQEAIQLANDSIYGLAGAVFSKDIGKAQRVANKLKLGTVWINDFHPYFAQAPWGGYK 484
Query: 646 ESG---EFNFCGKSGVQFYTQIKTV 667
+SG E GK G++ Y K +
Sbjct: 485 QSGIGRE---LGKEGLEEYLVSKHI 506
|
| >2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* Length = 500 | Back alignment and structure |
|---|
Score = 331 bits (852), Expect = e-103
Identities = 101/485 (20%), Positives = 190/485 (39%), Gaps = 34/485 (7%)
Query: 203 SNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVAT 262
G + I PA E ++V + ++++ V A+ A+ W + P
Sbjct: 25 EGVYNGSWGG--RGEVITTYCPANNEPIARVRQASVADYEETVKKAREAWKIWADIPAPK 82
Query: 263 RQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFV 322
R I+ ++ + +R I L +++E G L +V +++ + A ++ + G +
Sbjct: 83 RGEIVRQIGDALREKIQVLGSLVSLEMGKILVEGVGEVQEYVDICDYAVGLSRMIGGPIL 142
Query: 323 PNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMI 382
P+ G P+G+ I FNFP W +IA+ CGN + K + S+
Sbjct: 143 PSERSGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAIAMICGNVCLWKGAPTTSLISVA 202
Query: 383 LAALAMEA----GLPDGVLNIVHGTNDVINHICDDEDIKAISFVASSTASVQM----YAR 434
+ + + LP + ++ G D+ + DE + +SF T S Q+
Sbjct: 203 VTKIIAKVLEDNKLPGAICSLTCGGADIGTAMAKDERVNLLSF----TGSTQVGKQVGLM 258
Query: 435 AAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-- 492
R R GG N I DA + + + + A G AG+RCT +F+ S+
Sbjct: 259 VQERFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARR-LFIHESIHD 317
Query: 493 QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVV 552
+ + L + ++V D + GP+ + + ++ A G +++ G+
Sbjct: 318 EVVNRLKKAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGK---- 373
Query: 553 PGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIF 612
GN+V PTI+ + + E F P+L + + EE N + +SIF
Sbjct: 374 VMDRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFQNEEEVFAWNNEVKQGLSSSIF 433
Query: 613 TSSGLAARKFQNE--IEARLVGINVPVPSS-----FSSINESG---EFNFCGKSGVQFYT 662
T ++ + +V +N+P + F +G E G + Y
Sbjct: 434 TKDLGRIFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRE---SGSDAWKQYM 490
Query: 663 QIKTV 667
+ T
Sbjct: 491 RRSTC 495
|
| >1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* Length = 501 | Back alignment and structure |
|---|
Score = 331 bits (851), Expect = e-103
Identities = 115/482 (23%), Positives = 213/482 (44%), Gaps = 32/482 (6%)
Query: 204 NFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFP-AWKNTPVAT 262
+++ G++ I+V +P ++V + EE + +D + + ++ P
Sbjct: 21 SYLAGEWGG--SGQEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRWSARDMPGTE 78
Query: 263 RQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFV 322
R ++ K ++I R++D A + + G AA +V ++ + A G+++
Sbjct: 79 RLAVLRKAADIIERNLDVFAEVLVMNAGKPKSAAVGEVKAAVDRLRLAELDLKKIGGDYI 138
Query: 323 P--NALCGLDTYCF--REPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPG 378
P L+T REPLGV A I PFN+P + + + GN ++KPS +P
Sbjct: 139 PGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPL 198
Query: 379 TSMILAALAMEAGLPDGVLNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAAR 438
+ + ++AG P + +++ I D+ + A+SF ST + +
Sbjct: 199 PAAMAVKALLDAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTG-STEVGERVVKVGGV 257
Query: 439 GKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV--QWED 496
K+ GG + AI++ DA +D + + + AG+RC A+ V V + +
Sbjct: 258 -KQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKL-VLAERPVYGKLVE 315
Query: 497 ELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYE 556
E+ + +L+V D + DVGP++S D++ I++AV+ G +L GR
Sbjct: 316 EVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGR------RL 369
Query: 557 NGNFVGPTILR---DVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFT 613
+V PT + D +M YK E+F PV L ++ L++AI++ N + A++F
Sbjct: 370 GPTYVQPTFVEAPADRVKDMVLYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFG 429
Query: 614 SSGLAARKFQNEIEARLVGIN-VPVPSS----FSSINESG---EFNFCGKSGVQFYTQIK 665
+ R+ +E + IN +P F +SG E V+ T K
Sbjct: 430 RDVVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFRE---GIGYAVEAVTAYK 486
Query: 666 TV 667
T+
Sbjct: 487 TI 488
|
| >2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} Length = 515 | Back alignment and structure |
|---|
Score = 329 bits (846), Expect = e-102
Identities = 145/521 (27%), Positives = 233/521 (44%), Gaps = 30/521 (5%)
Query: 178 PNRSTPVNTSASPSGVSPNIDNNRVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTT 237
+R ++ V + +FI G+FV T ++PAT EV
Sbjct: 4 ADRVAGISWETIEE-VRRRLKERPALHFIAGEFVPSESGETFPSLDPATNEVLGVAARGG 62
Query: 238 YEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQ 297
E A AA AF W T R+R + ++ ELI + D+LA+ ++ G L+ +
Sbjct: 63 EREVDRAAKAAHEAFQRWSRTKAKERKRYLLRIAELIEKHADELAVMECLDAGQVLRIVR 122
Query: 298 RDVLFGLEVVEQACAVATLQI-GEFVP---NALCGLDTYCFREPLGVCAGICPFNFPDMT 353
V E A + P + L Y R P G I P+N P M
Sbjct: 123 AQVARAAENFAFYAEYAEHAMEDRTFPVDRDWLY----YTVRVPAGPVGIITPWNAPLML 178
Query: 354 PLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGTNDVI-NHICD 412
W + A+ GNT +LKP+E +P T+ LA + EA LP GV N+V G + +
Sbjct: 179 STWRIAPALAFGNTVVLKPAEWSPFTATKLAEILKEADLPPGVFNLVQGFGEEAGAALVA 238
Query: 413 DEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGF 472
+ ++ + + AA KR+ GGK+ A++ DA ++ L+A+V F
Sbjct: 239 HPLVPLLTLTGETETGKIVMRNAADHLKRLSPELGGKSPALVFADADLERALDAVVFQIF 298
Query: 473 GAAGERCTALSTAVFVGSSV--QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQIS 530
GERCTA S+ + V + + ++VE A+A++V D +VGP++ E ++
Sbjct: 299 SFNGERCTA-SSRLLVEEKIFEDFVGKVVERARAIRVGHPLDPETEVGPLIHPEHLQRVL 357
Query: 531 RLIQNAVDNGASLLLDGR----NIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLL 586
++ GA LL+ G + GN++ PT+ ++M+ +EEIFGPVL+
Sbjct: 358 GYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLV 416
Query: 587 NMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGIN----VPVPSSFS 642
+ EEA++ N ++ A +FT A + E+EA +V +N +P+ F
Sbjct: 417 AIPFKDEEEALRKANDTKYGLAAYVFTRDLERAHRLALELEAGMVYLNSHNVRHLPTPFG 476
Query: 643 SINESG---EFNFCGKSGVQFYTQIKTVAQQWND--LPKLG 678
+ SG E G + FYT +KT+A +PK G
Sbjct: 477 GVKGSGDRRE---GGTYALDFYTDLKTIALPLRPPHVPKFG 514
|
| >1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* Length = 516 | Back alignment and structure |
|---|
Score = 328 bits (844), Expect = e-102
Identities = 123/489 (25%), Positives = 207/489 (42%), Gaps = 39/489 (7%)
Query: 204 NFIGGKFVDLRGSATIDVINPA-TQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVAT 262
+IGG++VD + +NP+ EV E + A++AA +AF WK+ P
Sbjct: 40 LYIGGEWVD--TKERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFKTWKDWPQED 97
Query: 263 RQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFV 322
R R++ K L+RR +L + E G A DV ++ +E A V
Sbjct: 98 RSRLLLKAAALMRRRKRELEATLVYEVGKNWVEASADVAEAIDFIEYYARAALRYRYPAV 157
Query: 323 P-NALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSM 381
G D F PLG I P+NFP M V GNT I KP+E
Sbjct: 158 EVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGA 217
Query: 382 ILAALAMEAGLPDGVLNIVHGTNDVI-NHICDDEDIKAISFVASSTASVQMYARAAARG- 439
+ + EAG P GV+N + G + + ++ + I+ I+F S +++Y A
Sbjct: 218 KVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGRLAP 277
Query: 440 -----KRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-- 492
KR GGKN I+ A D +V + +G G++C+A S + +
Sbjct: 278 GQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAAS-RLILTQGAYE 336
Query: 493 QWEDELVELAKALKVNVG-TDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIV 551
+ +++ A+ L VG + + D+GPVVS E + ++ I+ + G L+L G+ +
Sbjct: 337 PVLERVLKRAERLS--VGPAEENPDLGPVVSAEQERKVLSYIEIGKNEGQ-LVLGGKRLE 393
Query: 552 VPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASI 611
GY F+ PT+ +V +EEIFGPVL ++ EA+++ N + +
Sbjct: 394 GEGY----FIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGV 449
Query: 612 FTSSGLAARKFQNEIEARLVGINVPVPSSF-----------SSIN-ESGEFNFCGKSGVQ 659
++ + E + N + + S N ++G ++
Sbjct: 450 YSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTG-----ALDYLR 504
Query: 660 FYTQIKTVA 668
+ ++K VA
Sbjct: 505 LFLEMKAVA 513
|
| >3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* Length = 486 | Back alignment and structure |
|---|
Score = 326 bits (838), Expect = e-101
Identities = 134/478 (28%), Positives = 228/478 (47%), Gaps = 35/478 (7%)
Query: 205 FIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQ 264
FI GK+++ +DVINP + EV ++P + EE K+A+D A++ KN P+ R
Sbjct: 3 FIDGKWIN---REDMDVINPYSLEVIKKIPALSREEAKEAIDTAEKYKEVMKNLPITKRY 59
Query: 265 RIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVPN 324
I+ + + I+ ++LA + ++ G +K A+ +V + + A E +P+
Sbjct: 60 NILMNIAKQIKEKKEELAKILAIDAGKPIKQARVEVERSIGTFKLAAFYVKEHRDEVIPS 119
Query: 325 ALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILA 384
+ REP+G+ I PFNFP + A+ GN + PS K P + LA
Sbjct: 120 D--DRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPAIATGNVIVHHPSSKAPLVCIELA 177
Query: 385 ALAMEA----GLPDGVLNIVHGTNDVI-NHICDDEDIKAISFVASSTASVQMYARAAARG 439
+ A +P GV N++ G +V+ + I +E + ISF SS + +A
Sbjct: 178 KIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAGF-- 235
Query: 440 KRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV--QWEDE 497
K++ GG N I++ DA ++ +NAL+ F AG+ C ++ + V S+ ++ +
Sbjct: 236 KKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGM-ILVDESIADKFIEM 294
Query: 498 LVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYEN 557
V AK L V D DVGP++SVE + + ++++ A+D G LLL G+ +
Sbjct: 295 FVNKAKVLNVGNPLDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGK-------RD 347
Query: 558 GNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGL 617
PTIL +V + K E F PV+ ++ + EE I + N + ++IFT+
Sbjct: 348 KALFYPTIL-EVDRDNILCKTETFAPVIPIIRTNE-EEMIDIANSTEYGLHSAIFTNDIN 405
Query: 618 AARKFQNEIEARLVGIN-VPVPSS----FSSINESG---EFNFCGKSGVQFYTQIKTV 667
+ KF +E V IN + F + +SG E K ++ + IKT+
Sbjct: 406 KSLKFAENLEFGGVVINDSSLFRQDNMPFGGVKKSGLGRE---GVKYAMEEMSNIKTI 460
|
| >3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} PDB: 3iwk_A* 4a0m_A* Length = 503 | Back alignment and structure |
|---|
Score = 323 bits (830), Expect = e-100
Identities = 132/482 (27%), Positives = 219/482 (45%), Gaps = 26/482 (5%)
Query: 205 FIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAF-----PAWKNTP 259
FI G + + I VINPATQ + +P T E+ AV AAK A W
Sbjct: 11 FINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNKGADWATAS 70
Query: 260 VATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIG 319
A R R + + + +LA +++ G L A D+ E +A
Sbjct: 71 GAVRARYLRAIAAKVTEKKPELAKLESIDCGKPLDEAAWDIDDVAGCFEYYADLAEKLDA 130
Query: 320 EFVPNALCGLD---TYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKN 376
+D ++ REP+GV I P+N+P + W + A+ G ILKPSE
Sbjct: 131 RQKAPVSLPMDTFKSHVLREPIGVVGLITPWNYPMLMATWKVAPALAAGCAAILKPSELA 190
Query: 377 PGTSMILAALAMEAGLPDGVLNIVHGT-NDVINHICDDEDIKAISFVASSTASVQMYARA 435
T + L + E GLP GVLNI+ G + + D+ ++F S+A+ A
Sbjct: 191 SLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAF-TGSSATGSKIMTA 249
Query: 436 AARG-KRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-- 492
AA+ K V GGK+ ++ D +D + F G+ C+A ++ + + S+
Sbjct: 250 AAQLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSA-TSRLILHESIAT 308
Query: 493 QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVV 552
++ + +V+ K +K++ + +GPVVS ++I + + NA GA++L G
Sbjct: 309 EFLNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGS--RP 366
Query: 553 PGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIF 612
+ G F+ PTI+ DVT+NM+ ++EE+FGPVL + EEAI + N + GA++
Sbjct: 367 EHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKTFSTEEEAIDLANDTVYGLGAAVI 426
Query: 613 TSSGLAARKFQNEIEARLVGIN----VPVPSSFSSINESG---EFNFCGKSGVQFYTQIK 665
++ + +A +V +N + + + SG E G+ G+ Y +K
Sbjct: 427 SNDLERCERVTKAFKAGIVWVNCSQPCFTQAPWGGVKRSGFGRE---LGEWGLDNYLSVK 483
Query: 666 TV 667
V
Sbjct: 484 QV 485
|
| >3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} Length = 528 | Back alignment and structure |
|---|
Score = 322 bits (829), Expect = 1e-99
Identities = 139/477 (29%), Positives = 223/477 (46%), Gaps = 22/477 (4%)
Query: 205 FIGGKFVDLRGSATIDVINPA-TQEVGSQVPLTTYEEFKDAVDAAKRAFPA--WKNTPVA 261
+ GK VD +TID ++P EV P + ++ + AV AA++AF A W A
Sbjct: 26 LVDGKSVDAASGSTIDRVSPGHAGEVVGTWPEASADDVRKAVAAARKAFDAGPWPRMSGA 85
Query: 262 TRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEF 321
R R+MFK+ +LI ++LA+ ++E G + A+ ++ F ++ A A G+
Sbjct: 86 ERSRLMFKVADLILARQEELALIESLEVGKPIAQARGEIGFCADLWSYAAGQARALEGQT 145
Query: 322 VPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSM 381
N REP+GV I P+NFP + A+ G T +LKPSE GTS+
Sbjct: 146 HNNIGDDRLGLVLREPVGVVGIITPWNFPFIIASERVPWAIGSGCTVVLKPSEFTSGTSI 205
Query: 382 ILAALAMEAGLPDGVLNIVHGTNDVI-NHICDDEDIKAISFVASSTASVQMYARAAARG- 439
LA LA EAG+PDGV N+V G D + +D ++ ++F S AAR
Sbjct: 206 RLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTG-SVRVGTKLGEIAARTV 264
Query: 440 KRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV--QWEDE 497
KRV GGK I+ DA +DA + + + AG+ C + + + V + +
Sbjct: 265 KRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCIS-GSRLLVQEGIRDALMER 323
Query: 498 LVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYEN 557
L+++++ + + +G ++S +++ + + +GA LLL G G E
Sbjct: 324 LLDISRKVAFGDPLNERTKIGAMISEAHAEKVHSYVTAGITSGAELLLGGER---IGREA 380
Query: 558 GNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGL 617
G + PT+ VT +M +EEIFGPVL + + +EA+ + N F AS+++++
Sbjct: 381 GLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFKTADEAVALANATEFGLSASVWSTNLE 440
Query: 618 AARKFQNEIEARLVGIN----VPVPSSFSSINESG---EFNFCGKSGVQFYTQIKTV 667
A + I A IN +SG E G+ G Y+Q K V
Sbjct: 441 TALQTIRRIRAGRCWINSVIDGTPELPIGGYKKSGLGRE---LGRYGFDEYSQFKGV 494
|
| >4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} Length = 485 | Back alignment and structure |
|---|
Score = 318 bits (818), Expect = 2e-98
Identities = 120/479 (25%), Positives = 214/479 (44%), Gaps = 22/479 (4%)
Query: 204 NFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATR 263
+FI GK+ T D++NP Q V + L T ++ +DA D A++A W + R
Sbjct: 9 SFINGKWTGGESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQKEWAKSTTEDR 68
Query: 264 QRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIG-EFV 322
+ ++ K + + + D + M I E G T+ + ++ + ++++A G + V
Sbjct: 69 KAVLQKARGYLHENRDDIIMMIARETGGTIIKSTIELEQTIAILDEAMTYTGELGGVKEV 128
Query: 323 PNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMI 382
P+ + G +R PLGV + I PFNFP + + A+ GN+ + KP + +
Sbjct: 129 PSDIEGKTNKIYRLPLGVISSISPFNFPMNLSMRSIAPAIALGNSVVHKPDIQTAISGGT 188
Query: 383 LAALAME-AGLPDGVLNIVHG-TNDVINHICDDEDIKAISFVASSTASVQMYARAAARGK 440
+ A A E AGLP GVLN++ ++ + + + + ISF S+ + A K
Sbjct: 189 IIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGEIAGRAFK 248
Query: 441 RVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWEDE--- 497
R+ GG N ++ DA +D ++A + F G+ C + V V DE
Sbjct: 249 RMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMI-INRIIVHQDV--YDEFVE 305
Query: 498 -LVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYE 556
K L TD VGP+++ ++ +I+ A +G L ++G+
Sbjct: 306 KFTARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGK-------R 358
Query: 557 NGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSG 616
GN + P + +N + + E+F P+ ++A S +EAI M N + +++FTS
Sbjct: 359 VGNVLTPYVFVGADNNSKIAQTELFAPIATIIKAGSDQEAIDMANDTEYGLSSAVFTSDL 418
Query: 617 LAARKFQNEIEARLVGINVPVPSS-----FSSINESGEFNFCGKSGVQFYTQIKTVAQQ 670
KF +I++ + +N + F SG F V+ +T K ++ Q
Sbjct: 419 EKGEKFALQIDSGMTHVNDQSVNDSPNIAFGGNKASGVGRFGNPWVVEEFTVTKWISIQ 477
|
| >1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A Length = 495 | Back alignment and structure |
|---|
Score = 317 bits (814), Expect = 8e-98
Identities = 118/476 (24%), Positives = 206/476 (43%), Gaps = 22/476 (4%)
Query: 204 NFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATR 263
I G+ V G V NPAT +V ++ + E+ AV AA AF W T R
Sbjct: 26 LLINGELVSGEG-EKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPKVR 84
Query: 264 QRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQR-DVLFGLEVVEQACAVATLQIGEFV 322
+ KL ++I + A + G L +A ++ ++V A G
Sbjct: 85 AECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAA 144
Query: 323 PNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMI 382
L G + R+PLGV A I P+N+P M W + A+ GN +LKPSE P T++
Sbjct: 145 GEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALK 204
Query: 383 LAALAMEAGLPDGVLNIVHGTNDVI-NHICDDEDIKAISFVASSTASVQMYARAAARGKR 441
LA LA + P GV+NI+ G + + + ++ +S S + + A+ KR
Sbjct: 205 LAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTASSIKR 263
Query: 442 VQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV--QWEDELV 499
GGK I+ DA I+A + + + G+ AG+ CTA + ++ + ++L
Sbjct: 264 THMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTA-ACRIYAQKGIYDTLVEKLG 322
Query: 500 ELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNG-ASLLLDGRNIVVPGYENG 558
LK D S ++GP+ S+ +++ + ++ A G ++ G NG
Sbjct: 323 AAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGE----KRKGNG 378
Query: 559 NFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLA 618
+ PT+L + ++E+FGPV+ D+ E+ + N +++ +S++T
Sbjct: 379 YYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGR 438
Query: 619 ARKFQNEIEARLVGIN--VPVPSS--FSSINESG---EFNFCGKSGVQFYTQIKTV 667
A + ++ +N + S SG + G++ YT ++ V
Sbjct: 439 AHRVSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDM---SLYGLEDYTVVRHV 491
|
| >1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* Length = 501 | Back alignment and structure |
|---|
Score = 316 bits (811), Expect = 3e-97
Identities = 149/482 (30%), Positives = 218/482 (45%), Gaps = 32/482 (6%)
Query: 205 FIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAF---PAWKNTPVA 261
FI ++ V NPAT+E +V E+ AV AA++AF W+ +
Sbjct: 24 FINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDAS 83
Query: 262 TRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQR-DVLFGLEVVEQACAVATLQIGE 320
R R++ KL +LI RD LA + G A D+ ++ + A G
Sbjct: 84 ERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGR 143
Query: 321 FVP---NALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNP 377
+P N Y EP+GVC I P+NFP + LW A++CGNT ++KP+E+ P
Sbjct: 144 TIPMDGNFFT----YTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTP 199
Query: 378 GTSMILAALAMEAGLPDGVLNIVHGT-NDVINHICDDEDIKAISFVASSTASVQMYARAA 436
T++ + +L EAG P GV+NIV G I D+ ++F ST ++ AA
Sbjct: 200 LTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFT-GSTEVGKLIKEAA 258
Query: 437 ARG--KRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-- 492
+ KRV GGK+ I+ DA +D + F G+ C A S +FV S+
Sbjct: 259 GKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASR-LFVEESIYD 317
Query: 493 QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVV 552
++ VE AK + GP + E ++I LI++ GA L G
Sbjct: 318 EFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGN 377
Query: 553 PGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIF 612
GY F+ PT+ DVT +M KEEIFGPV M+ SL++ IK N + A IF
Sbjct: 378 KGY----FIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIF 433
Query: 613 TSSGLAARKFQNEIEARLVGIN----VPVPSSFSSINESG---EFNFCGKSGVQFYTQIK 665
T+ A + +++ V +N V F SG E G+ G YT++K
Sbjct: 434 TNDIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRE---LGEYGFHEYTEVK 490
Query: 666 TV 667
TV
Sbjct: 491 TV 492
|
| >4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* Length = 498 | Back alignment and structure |
|---|
Score = 314 bits (806), Expect = 1e-96
Identities = 111/490 (22%), Positives = 216/490 (44%), Gaps = 22/490 (4%)
Query: 190 PSGVSPNIDNNRVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAK 249
+ IG +F A ++NP T + ++ + AVDAA+
Sbjct: 14 GTENLYFQSMMDTQLLIGSRFEAGTE-AEEHILNPRTGAGIIDLAEASHAQIDAAVDAAE 72
Query: 250 RAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQR-DVLFGLEVVE 308
RAF W T A R + K+ + I ++ D+ A + G + A + ++ ++
Sbjct: 73 RAFVGWSQTTPAERSNALLKIADAIEKEADEFAALEALNCGKPINAVKNDELPAIIDCWR 132
Query: 309 QACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTF 368
L G + R+P+G+ I P+N+P M W + A+ GNT
Sbjct: 133 FFAGAVRNLHAPAAGEYLPGHTSMIRRDPIGIVGSIAPWNYPLMMMAWKLAPAIGGGNTV 192
Query: 369 ILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGTNDVI-NHICDDEDIKAISFVASSTA 427
+ KPSE+ P T++ LA L + LP+GV+N++ G + + N + + + +S A
Sbjct: 193 VFKPSEQTPLTALKLARLIADI-LPEGVVNVITGRGETVGNALINHPKVGMVSITG-DIA 250
Query: 428 SVQMYARAAARG-KRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAV 486
+ + AAA+ KR GGK I+ DA ++A +N + + G+ AG+ CTA + +
Sbjct: 251 TGKKVLAAAAKTVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTA-ACRI 309
Query: 487 FVGSSV--QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLL 544
+ + + + +L ++ N+ D ++GP++S +D+++ ++ A D +
Sbjct: 310 YAEAGIYEKLVADLTSAVSTIRYNLDDDTENEIGPLISRRQRDRVASFVERAADQKHIEI 369
Query: 545 LDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNR 604
G G + G F PT++ T E + E+FGPV+ + ++A+ N +
Sbjct: 370 TTGGR---TGSDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDDAVAWANDSD 426
Query: 605 FVNGASIFTSSGLAARKFQNEIEARLVGIN--VPVPSS--FSSINESG---EFNFCGKSG 657
+ +S++T A + + ++ IN + + I +SG +
Sbjct: 427 YGLASSVWTKDISKAMRAASRLQYGCTWINTHFMLTNEMPHGGIKQSGYGKDM---SVYA 483
Query: 658 VQFYTQIKTV 667
++ YT ++ +
Sbjct: 484 LEDYTAVRHI 493
|
| >2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* Length = 479 | Back alignment and structure |
|---|
Score = 312 bits (803), Expect = 2e-96
Identities = 142/489 (29%), Positives = 233/489 (47%), Gaps = 35/489 (7%)
Query: 201 RVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPV 260
+ +I G+FV RG A IDV+NPAT+ V S++P E+ + A+DAA+RA P W+ P
Sbjct: 6 QHPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPEWEALPA 65
Query: 261 ATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGE 320
R + K+ IR +++ I E G + A+ +V F + ++ A GE
Sbjct: 66 IERASWLRKISAGIRERASEISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRYEGE 125
Query: 321 FVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSI------AVTCGNTFILKPSE 374
+ + G + F+ LGV GI P+NFP F I A+ GNT ++KPSE
Sbjct: 126 IIQSDRPGENILLFKRALGVTTGILPWNFP------FFLIARKMAPALLTGNTIVIKPSE 179
Query: 375 KNPGTSMILAALAMEAGLPDGVLNIVHGTNDVI-NHICDDEDIKAISFVASSTASVQMYA 433
P ++ A + E GLP GV N+V G + + + + + +S S +A ++ A
Sbjct: 180 FTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMA 239
Query: 434 RAAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTA--VFVGSS 491
AA +V GGK AI+M DA ++ + A+V + +G+ C A V+V
Sbjct: 240 TAAKNITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNC---AERVYVQKG 296
Query: 492 V--QWEDELVELAKALKVNVGTDASA-DVGPVVSVEVKDQISRLIQNAVDNGASLLLDGR 548
+ Q+ + L E +A++ + + +GP+++ +++ + + AV+ GA + G+
Sbjct: 297 IYDQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGK 356
Query: 549 NIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNG 608
G + PT+L DV M EE FGPVL + D+LE+AI M N + +
Sbjct: 357 ----AVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLT 412
Query: 609 ASIFTSSGLAARKFQNEIEARLVGINVPVPSS----FSSINESG---EFNFCGKSGVQFY 661
+SI+T + A K ++ IN + + +SG GK G+ Y
Sbjct: 413 SSIYTQNLNVAMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGIGGA---DGKHGLHEY 469
Query: 662 TQIKTVAQQ 670
Q + V Q
Sbjct: 470 LQTQVVYLQ 478
|
| >1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... Length = 500 | Back alignment and structure |
|---|
Score = 312 bits (803), Expect = 4e-96
Identities = 147/482 (30%), Positives = 216/482 (44%), Gaps = 32/482 (6%)
Query: 205 FIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAF---PAWKNTPVA 261
FI ++ D T +NP+T EV QV E+ AV AA+ AF W+ +
Sbjct: 23 FINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDAS 82
Query: 262 TRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQR-DVLFGLEVVEQACAVATLQIGE 320
R R++ +L +LI RD LA T++ G + D+ L+ + A G+
Sbjct: 83 HRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGK 142
Query: 321 FVP---NALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNP 377
+P + Y EP+GVC I P+NFP + W A+ GN ++K +E+ P
Sbjct: 143 TIPIDGDFFS----YTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTP 198
Query: 378 GTSMILAALAMEAGLPDGVLNIVHGT-NDVINHICDDEDIKAISFVASSTASVQMYARAA 436
T++ +A L EAG P GV+NIV G I ED+ ++F ST ++ AA
Sbjct: 199 LTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFT-GSTEIGRVIQVAA 257
Query: 437 ARG--KRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-- 492
KRV GGK+ IIM DA +D + A F G+ A S FV +
Sbjct: 258 GSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSR-TFVQEDIYD 316
Query: 493 QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVV 552
++ + V AK+ V D+ + GP V +I I GA LL G
Sbjct: 317 EFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAAD 376
Query: 553 PGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIF 612
GY F+ PT+ DV M KEEIFGPV+ ++ ++EE + N + + A++F
Sbjct: 377 RGY----FIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVF 432
Query: 613 TSSGLAARKFQNEIEARLVGIN----VPVPSSFSSINESG---EFNFCGKSGVQFYTQIK 665
T A ++A V +N S F SG E G+ G+Q YT++K
Sbjct: 433 TKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRE---LGEYGLQAYTEVK 489
Query: 666 TV 667
TV
Sbjct: 490 TV 491
|
| >2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* Length = 517 | Back alignment and structure |
|---|
Score = 309 bits (795), Expect = 8e-95
Identities = 133/485 (27%), Positives = 224/485 (46%), Gaps = 33/485 (6%)
Query: 205 FIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAF--PAWKNTPVAT 262
FIGG+FVD GS T + INP V QV L + AV AAK AF W
Sbjct: 40 FIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARD 99
Query: 263 RQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQR-DVLFGLEVVEQACAVATLQIGEF 321
R R++++L +++ + ++LA ++ G A + V ++ G
Sbjct: 100 RGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGAT 159
Query: 322 VPNALCGLD---TYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPG 378
+P + T +EP+GVC + P+N+P M W + + GNT ++KP++ P
Sbjct: 160 IPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPL 219
Query: 379 TSMILAALAMEAGLPDGVLNIVHGTNDVI-NHICDDEDIKAISFVASSTASVQMYARAAA 437
T++ A L ++AG+P GV+NI+ G+ ++ + D D++ I F ST + ++ A
Sbjct: 220 TALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGF-TGSTEVGKHIMKSCA 278
Query: 438 RG--KRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV--Q 493
K+V GGK+ II D ++ + +S+ F GE C A + +FV S+ Q
Sbjct: 279 LSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIA-AGRLFVEESIHNQ 337
Query: 494 WEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVP 553
+ ++VE + +K+ + + GP ++ Q V GA+L+ G + P
Sbjct: 338 FVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRP 397
Query: 554 GYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNM--QADSLEEAIKMVNRNRFVNGASI 611
G+ F PT+ DV +M KEE FGP+++ ++ + N F + +
Sbjct: 398 GF----FFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGV 453
Query: 612 FTSSGLAARKFQNEIEARLVGIN------VPVPSSFSSINESG---EFNFCGKSGVQFYT 662
FT A ++++A V IN V P F +SG + G++ + Y
Sbjct: 454 FTRDINKALYVSDKLQAGTVFINTYNKTDVAAP--FGGFKQSGFGKD---LGEAALNEYL 508
Query: 663 QIKTV 667
+IKTV
Sbjct: 509 RIKTV 513
|
| >2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* Length = 534 | Back alignment and structure |
|---|
Score = 310 bits (796), Expect = 1e-94
Identities = 90/514 (17%), Positives = 169/514 (32%), Gaps = 52/514 (10%)
Query: 201 RVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPV 260
+ N + G+++ G A I + +P T +V + + A + A +
Sbjct: 7 LLKNHVAGQWIAGTG-AGITLTDPVTGVALVRVSSEGLDLARAFSFAREDGGAALRALTY 65
Query: 261 ATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGE 320
A R + + +L++ T GTT + D+ G+ + +
Sbjct: 66 AQRAARLADIVKLLQAKRGDYYAIATANSGTTRNDSAVDIDGGIFTLSYYAKLGASLGEV 125
Query: 321 FVPNALCG---------LDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILK 371
+ GV I FNFP + A+ G I+K
Sbjct: 126 HALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVPVIVK 185
Query: 372 PSEKNPGTSMILAALAMEAG-LPDGVLNIVHGT-NDVINHICDDEDIKAISFVASSTASV 429
P+ + + A ++AG LP G L+I+ G+ +++ +SF S+ +
Sbjct: 186 PATATAWLTQRMVADVVDAGILPPGALSIICGSSAGLLDQ---IRSFDVVSFTGSADTAA 242
Query: 430 QMYARAAA--RGKRVQSNRGGKNYAIIMPDA-----SIDATLNALVSAGFGAAGERCTAL 482
+ A A RG R+ N AI+ DA + D + +V +G++CTA
Sbjct: 243 TLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTA- 301
Query: 483 STAVFVGSSV--QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNG 540
FV + + L + V + + +G +VS E + + I +
Sbjct: 302 IRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAALREEA 361
Query: 541 ASLLLDG-RNIVVPGYENGNFVGPTILR--DVTSNMECYKEEIFGPVL--------LNMQ 589
++ V P + D + + E+FGPV +
Sbjct: 362 VLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNATLLHDVEVFGPVASVAPYRVTTDTN 421
Query: 590 ADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPVPSSFSSINESGE 649
A A+ + R + ASI+++ + E+ ++ PS S G
Sbjct: 422 ALPEAHAVALARRGQGSLVASIYSNDDAHLGRLALELADSHGRVHAISPSVQHSQTGHGN 481
Query: 650 FN----------------FCGKSGVQFYTQIKTV 667
G + FY + +
Sbjct: 482 VMPMSLHGGPGRAGGGEELGGLRALAFYHRRSAI 515
|
| >3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} Length = 497 | Back alignment and structure |
|---|
Score = 304 bits (780), Expect = 6e-93
Identities = 144/496 (29%), Positives = 233/496 (46%), Gaps = 50/496 (10%)
Query: 201 RVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPV 260
NFIGG++V S TID+++P+T +V ++P + ++A++ A+ A AW
Sbjct: 12 NKVNFIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKADAENALEVAQAAQKAWAKLTA 71
Query: 261 ATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGE 320
TRQ ++ IR + LA + EQG L A+ +V ++ C A G+
Sbjct: 72 RTRQNMLRTFANKIRENKHILAPMLVAEQGKLLSVAEMEVDVTATFIDYGCDNALTIEGD 131
Query: 321 FVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSI------AVTCGNTFILKPSE 374
+P+ Y + P GV GI +NF PL + A+ GNT +LKP++
Sbjct: 132 ILPSDNQDEKIYIHKVPRGVVVGITAWNF----PLAL--AGRKIGPALITGNTMVLKPTQ 185
Query: 375 KNPGTSMILAALAMEAGLPDGVLNIVHG-TNDVINHICDDEDIKAISFVASSTASVQMYA 433
+ P + L +A EAGLPDGVLN+++G + V +C+ K I+ S+ A Q+Y
Sbjct: 186 ETPLATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYK 245
Query: 434 RAAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTA--VFVGSS 491
+A V GGK ++M DA +D + F G+ CT ++V +S
Sbjct: 246 TSAEYMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTC---VERLYVHAS 302
Query: 492 V--QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRN 549
V ++ + + L K LKV DA + +GP + D I ++ A+ GA++ G+
Sbjct: 303 VYDEFMAKFLPLVKGLKVGDPMDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKT 362
Query: 550 IVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGA 609
V G+E G + PT+L DV + EE FGP+L ++ S+E+AI+ N + +
Sbjct: 363 ATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKVSSMEQAIEFCNDSIY---- 418
Query: 610 SIFTSSGLAA--------RKFQ--NEIEARLVGINVPVPSS----FSSINESG---EFNF 652
GL+A Q +++E V IN + + +SG E
Sbjct: 419 ------GLSAYVHTQSFANINQAISDLEVGEVYINRGMGEQHQGFHNGWKQSGFGGE--- 469
Query: 653 CGKSGVQFYTQIKTVA 668
GK G++ Y + KTV
Sbjct: 470 DGKFGLEQYLEKKTVY 485
|
| >3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A Length = 462 | Back alignment and structure |
|---|
Score = 295 bits (758), Expect = 3e-90
Identities = 125/469 (26%), Positives = 214/469 (45%), Gaps = 34/469 (7%)
Query: 216 SATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIR 275
+ +NPAT + + +P +E + A+ A F WK T VA R + + + + +R
Sbjct: 6 ATQALSVNPATGQTLAAMPWANAQEIEHALSLAASGFKKWKMTSVAQRAQTLRDIGQALR 65
Query: 276 RDIDKLAMNITVEQGTTLKAAQRDVLFGLEVV----EQACAVATLQIGEFVPNALCGLDT 331
+++A IT E G +K A+ +V + E A+ + P +
Sbjct: 66 AHAEEMAQCITREMGKPIKQARAEVTKSAALCDWYAEHGPAM----LNP-EPTLVENQQA 120
Query: 332 YCFREPLGVCAGICPFNFPDMTPLWM---FSI-AVTCGNTFILKPSEKNPGTSMILAALA 387
PLGV I P+NF PLW ++ + GN+++LK + G + ++A +
Sbjct: 121 VIEYRPLGVILAIMPWNF----PLWQVLRGAVPILLAGNSYLLKHAPNVTGCAQMIARIL 176
Query: 388 MEAGLPDGVLNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRG 447
EAG P GV V+ N+ ++ + +D I A++ S A + A+A A K+ G
Sbjct: 177 AEAGTPAGVYGWVNANNEGVSQMINDPRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELG 236
Query: 448 GKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV--QWEDELVELAKAL 505
G + I++ DA ++ + A V+ + G+ C A + V + + D V A AL
Sbjct: 237 GSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAA-AKRFIVEEGIAQAFTDRFVAAAAAL 295
Query: 506 KVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTI 565
K+ D+GP+ +++D++ + +Q +V GA LLL G I GN+ T+
Sbjct: 296 KMGDPLVEENDLGPMARFDLRDELHQQVQASVAEGARLLLGGEKIAGE----GNYYAATV 351
Query: 566 LRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNE 625
L DVT +M +++E+FGPV A A+ + N + F A+IFT+ A +
Sbjct: 352 LADVTPDMTAFRQELFGPVAAITVAKDAAHALALANDSEFGLSATIFTADDTLAAEMAAR 411
Query: 626 IEARLVGINVPVPSS----FSSINESG---EFNFCGKSGVQFYTQIKTV 667
+E V IN S F + +SG E G+ + ++TV
Sbjct: 412 LECGGVFINGYSASDARVAFGGVKKSGFGREL---SHFGLHEFCNVQTV 457
|
| >3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} Length = 484 | Back alignment and structure |
|---|
Score = 295 bits (757), Expect = 9e-90
Identities = 104/468 (22%), Positives = 190/468 (40%), Gaps = 34/468 (7%)
Query: 217 ATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRR 276
+ +NP T E + T ++ +A++ A + W++ A+R I+ + ++
Sbjct: 4 SKYQSVNPYTNEAFASYDNPTSKQIDEAINLAHALYKKWRHEEPASRAEILHDIANALKE 63
Query: 277 DIDKLAMNITVEQGTTLKAAQRDVLFGLEVV----EQACAVATLQIGEFVPNALCGLDTY 332
D+LA +T+E G L ++ +V + + + + + Y
Sbjct: 64 HEDELAKMMTLEMGKLLSESKEEVELCVSICNYYADHGPEMLKPTKLNSDLG-----NAY 118
Query: 333 CFREPLGVCAGICPFNFPDMTPLWM---FSI-AVTCGNTFILKPSEKNPGTSMILAALAM 388
++ GV P+NFP L+ GN +LK + PG++ + A +
Sbjct: 119 YLKQSTGVIMACEPWNFP----LYQVIRVFAPNFIVGNPILLKHAHNVPGSAALTAKIIK 174
Query: 389 EAGLPDGVLNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGG 448
AG P+G L ++ + D + I D I+ ++ S + A K+ GG
Sbjct: 175 RAGAPEGSLINLYPSYDQLADIIADPRIQGVALTGSERGGSAVAEAAGKNLKKSTMELGG 234
Query: 449 KNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV--QWEDELVELAKALK 506
+ I++ DA N L A G+ CT+ S + V S + EL + LK
Sbjct: 235 NDAFIVLDDADPQVLRNVLNDARTYNDGQVCTS-SKRIIVEKSRYDEVLHELKNVFSNLK 293
Query: 507 VNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTIL 566
+A + P+ S + K+++ ++ A+D GA + I G F PTIL
Sbjct: 294 AGDPLEADTTLPPMNSEKAKEKLEAQVKEAIDAGAKVFYQYPEIDSKG----AFFRPTIL 349
Query: 567 RDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEI 626
D+ + + +E+FGP+ + AI++ N + + G+S+ S A+K +I
Sbjct: 350 TDIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGSDIDRAKKVSAQI 409
Query: 627 EARLVGINVPVPSS----FSSINESG---EFNFCGKSGVQFYTQIKTV 667
E + IN +S F I +SG E G+ + V
Sbjct: 410 ETGMTVINGRWITSGELPFGGIKKSGYGREL---SGLGLMAFVNEHLV 454
|
| >3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} Length = 504 | Back alignment and structure |
|---|
Score = 289 bits (741), Expect = 3e-87
Identities = 144/523 (27%), Positives = 235/523 (44%), Gaps = 54/523 (10%)
Query: 177 RPNRSTPVNTSASPSGVSPNIDNN--RVSNFIGGKFVDLRGSATIDVINPATQEVGSQVP 234
+ T + P + D + + + G+++D TI V NPA V VP
Sbjct: 6 HHHMGTLEAQTQGPGSMLALKDPSLLKSQCLVNGRWIDAADGTTIKVTNPADGSVIGTVP 65
Query: 235 LTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLK 294
+ K+A+DA+ +A W R I+ K +LI + D +A+ +T EQG L
Sbjct: 66 SLSVATIKEAIDASAKALSGWAAKTAKERAGILRKWFDLIIANADDIALIMTSEQGKPLA 125
Query: 295 AAQRDVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTP 354
A+ +VL+ +E A G+ +P G R+P+GV A I P+NF P
Sbjct: 126 EARGEVLYAASFIEWFAEEAKRVYGDTIPAPQNGQRLTVIRQPVGVTAAITPWNF----P 181
Query: 355 LWMFSI------AVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHG-TNDVI 407
M I A+ G T I++P++ P T++ L LA +AG+P GVL IV G ++
Sbjct: 182 AAM--ITRKAAPALAAGCTMIVRPADLTPLTALALGVLAEKAGIPAGVLQIVTGKAREIG 239
Query: 408 NHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMPDASIDATLNAL 467
+ ++ ++ +SF S+ + A+ A KR+ GG I+ DA +DA ++
Sbjct: 240 AELTSNDTVRKLSFTGSTEVGRLLMAQCAPTIKRISLELGGNAPFIVFDDADLDAAVDGA 299
Query: 468 VSAGFGAAGERCTALSTAVFVGSSV--QWEDELVELAKALKVNVGTDASADVGPVVSVEV 525
+ + + AG+ C + ++V V ++ ++L K LKV GT+ +GP++ +
Sbjct: 300 MVSKYRNAGQTCVC-ANRIYVQRGVYDKFAEKLAAKVKELKVGNGTEPGVVIGPMIEEKA 358
Query: 526 KDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVL 585
++ I++AV GA L+ G+ + G F P IL VTS+M KEE FGP+
Sbjct: 359 ITKVKAHIEDAVSKGAKLITGGKEL------GGLFFEPGILTGVTSDMLVAKEETFGPLA 412
Query: 586 LNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEI----------EARLVGINV 635
D+ EE I N T GLAA + E +VG N
Sbjct: 413 PLFAFDTEEEVIAQAND----------TIFGLAAYFYTENFSRAIRVSEALEYGMVGHNT 462
Query: 636 PVPSS----FSSINESG---EFNFCGKSGVQFYTQIKTVAQQW 671
+ S+ F + +SG E K G++ Y + K + +
Sbjct: 463 GLISNEVAPFGGVKQSGLGRE---GSKYGIEEYLETKYICSAY 502
|
| >3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} Length = 481 | Back alignment and structure |
|---|
Score = 287 bits (736), Expect = 7e-87
Identities = 138/494 (27%), Positives = 223/494 (45%), Gaps = 50/494 (10%)
Query: 201 RVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPV 260
R I G+++D IDV NPA + VP +E + A+DAA RA PAW+
Sbjct: 9 RQQALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRALTA 68
Query: 261 ATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGE 320
R I+ L+ D LA +T+EQG L A+ ++ + +E G+
Sbjct: 69 KERATILRNWFNLMMEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYGD 128
Query: 321 FVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSI------AVTCGNTFILKPSE 374
+P ++P+GV A I P+NF P M I A+ G T +LKP+
Sbjct: 129 TIPGHQADKRLIVIKQPIGVTAAITPWNF----PAAM--ITRKAGPALAAGCTMVLKPAS 182
Query: 375 KNPGTSMILAALAMEAGLPDGVLNIVHG-TNDVINHICDDEDIKAISFVASSTASVQMYA 433
+ P +++ LA LA+ AG+P GV N+V G V N + + ++ +SF S+ Q+
Sbjct: 183 QTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLME 242
Query: 434 RAAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV- 492
+ A K+V GG I+ DA +D + +++ F AG+ C + ++V V
Sbjct: 243 QCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVC-ANRLYVQDGVY 301
Query: 493 -QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIV 551
++ ++L + L + G D +GP++ + ++ I +A++ GA ++ G+
Sbjct: 302 DRFAEKLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGK--- 358
Query: 552 VPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASI 611
GNF PTIL DV +N + KEE FGP+ + + I N
Sbjct: 359 -AHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQAND--------- 408
Query: 612 FTSSGLAARKFQNEI----------EARLVGINVPVPSS----FSSINESG---EFNFCG 654
T GLAA + ++ E +VGIN + S+ F I SG E
Sbjct: 409 -TEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGRE---GS 464
Query: 655 KSGVQFYTQIKTVA 668
K G++ Y +IK +
Sbjct: 465 KYGIEDYLEIKYMC 478
|
| >3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} Length = 506 | Back alignment and structure |
|---|
Score = 287 bits (736), Expect = 2e-86
Identities = 125/500 (25%), Positives = 224/500 (44%), Gaps = 61/500 (12%)
Query: 201 RVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPV 260
++ +IGG++ D G AT DV NPAT V ++VP E+ AV+A + A P+
Sbjct: 11 NLTGYIGGRWKDSAGGATFDVYNPATGSVIAKVPSMPEEDVVAAVEAGQSALRLTNPWPI 70
Query: 261 ATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVV----EQACAVATL 316
TR++ + +++ ++ + +++ + +E G K AQ +V + + A+
Sbjct: 71 ETRRKWLEDIRDGLKENREEIGRILCMEHGKPWKEAQGEVDYAAGFFDYCAKHISALD-- 128
Query: 317 QIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSI------AVTCGNTFIL 370
+P P+GV I P+NF P+ M I A+ G ++
Sbjct: 129 --SHTIPEKPKDCTWTVHYRPVGVTGLIVPWNF----PIGM--IAKKLSAALAAGCPSVI 180
Query: 371 KPSEKNPGTSMILAALAMEAGLPDGVLNIVHG-TNDVINHICDDEDIKAISFVASSTASV 429
KP+ + P T + ++ + LPDG++N+V G + + +C+ +D+ +SF S+
Sbjct: 181 KPASETPLTMIAFFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGR 240
Query: 430 QMYARAAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTA--VF 487
++ A + K++ GG I+ DA ++A + L++ F G+ C A +F
Sbjct: 241 KLIVDTAEQVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVC---ANRIF 297
Query: 488 VGSSV--QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLL 545
V V + +L E + V G + D+GP+++ + D++ R +Q+A+D GASL+
Sbjct: 298 VHEKVADAFGQKLAERVNKMTVGDGMNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVA 357
Query: 546 DGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRF 605
+ +G F PT+++ V M CY+EE FGP++ + EE I N
Sbjct: 358 GKQ---PAELGDGLFFPPTVVQGVDREMCCYQEETFGPLVPMALFRTEEEVIDAGND--- 411
Query: 606 VNGASIFTSSGLAA--------RKFQ--NEIEARLVGINVPVPSS----FSSINESG--- 648
T GLA+ R + + VG N + F + SG
Sbjct: 412 -------TEFGLASYVFTADAERAQRVAAGLRFGHVGWNTGTGPTPEAPFGGMKASGIGR 464
Query: 649 EFNFCGKSGVQFYTQIKTVA 668
E G G+ + + +TV
Sbjct: 465 E---GGLEGLFEFVEAQTVP 481
|
| >3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q Length = 484 | Back alignment and structure |
|---|
Score = 285 bits (732), Expect = 3e-86
Identities = 132/486 (27%), Positives = 223/486 (45%), Gaps = 34/486 (6%)
Query: 201 RVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPV 260
R +IGG++ AT +V +PAT E VP E A++AA+ A+ W+
Sbjct: 12 RHQAYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWAGWRMKTA 71
Query: 261 ATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGE 320
R I+ + +L+ + D LA+ +T EQG L A+ ++ + +E G+
Sbjct: 72 KERAAILRRWFDLVIANSDDLALILTTEQGKPLAEAKGEIAYAASFIEWFAEEGKRVAGD 131
Query: 321 FVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSI------AVTCGNTFILKPSE 374
+P +EP+GVCA I P+NF P M I A+ G ++KP+E
Sbjct: 132 TLPTPDANKRIVVVKEPIGVCAAITPWNF----PAAM--IARKVGPALAAGCPIVVKPAE 185
Query: 375 KNPGTSMILAALAMEAGLPDGVLNIVHG-TNDVINHICDDEDIKAISFVASSTASVQMYA 433
P +++ +A LA AG+P GVL++V G + I + ++ +SF S+ + A
Sbjct: 186 STPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMA 245
Query: 434 RAAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTA--VFVGSS 491
++A K++ GG I+ DA +DA + +++ + G+ C FV
Sbjct: 246 QSAPTVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVC---TNRFFVHER 302
Query: 492 V--QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRN 549
V + D+L LKV GT++ A +GP+++ ++ I +A+ GASL+ G+
Sbjct: 303 VYDAFADKLAAAVSKLKVGRGTESGATLGPLINEAAVKKVESHIADALAKGASLMTGGK- 361
Query: 550 IVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGA 609
F PT+L V +M+ KEE FGP+ + S EE +++ N F A
Sbjct: 362 ---RHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVRLANDTEFGLAA 418
Query: 610 SIFTSSGLAARKFQNEIEARLVGINVPVPSS----FSSINESG---EFNFCGKSGVQFYT 662
+++ + +E +VGIN + S+ F + +SG E G+ Y
Sbjct: 419 YLYSRDIGRVWRVAEALEYGMVGINTGLISNEVAPFGGVKQSGLGRE---GSHYGIDDYV 475
Query: 663 QIKTVA 668
IK +
Sbjct: 476 VIKYLC 481
|
| >2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* Length = 487 | Back alignment and structure |
|---|
Score = 280 bits (719), Expect = 2e-84
Identities = 134/491 (27%), Positives = 224/491 (45%), Gaps = 44/491 (8%)
Query: 201 RVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPV 260
R +F+GG+++ +AT V +PA+ V E + AV AA AF W+
Sbjct: 12 RTDSFVGGRWLP--AAATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCRWREVSA 69
Query: 261 ATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGE 320
R ++ K L+ ++ D LA IT E G LK A ++L+ +E A G+
Sbjct: 70 KERSSLLRKWYNLMIQNKDDLARIITAESGKPLKEAHGEILYSAFFLEWFSEEARRVYGD 129
Query: 321 FVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSI------AVTCGNTFILKPSE 374
+ ++P+GV A I P+NF P M I A+ G T ++KP+E
Sbjct: 130 IIHTPAKDRRALVLKQPIGVAAVITPWNF----PSAM--ITRKVGAALAAGCTVVVKPAE 183
Query: 375 KNPGTSMILAALAMEAGLPDGVLNIVHGTN----DVINHICDDEDIKAISFVASSTASVQ 430
P +++ LA LA +AG+P GV N++ + +V IC D + ISF S+T
Sbjct: 184 DTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKI 243
Query: 431 MYARAAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTA--VFV 488
+ AA KRV GG I+ A++D + +++ F G+ C + V
Sbjct: 244 LLHHAANSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVC---SNQFLV 300
Query: 489 GSSVQWEDELVE-----LAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASL 543
+ D V+ + K L+V G + GP+++ + +++ + + +AV GA++
Sbjct: 301 QRGIH--DAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATV 358
Query: 544 LLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRN 603
+ G+ NF PT+L +VT +M C EE FGP+ ++ D+ EEAI + N
Sbjct: 359 VTGGK----RHQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAA 414
Query: 604 RFVNGASIFTSSGLAARKFQNEIEARLVGINVPVPSS----FSSINESG---EFNFCGKS 656
++ + ++E +VG+N + SS F + +SG E K
Sbjct: 415 DVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGRE---GSKY 471
Query: 657 GVQFYTQIKTV 667
G+ Y ++K V
Sbjct: 472 GIDEYLELKYV 482
|
| >4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} Length = 1026 | Back alignment and structure |
|---|
Score = 288 bits (738), Expect = 2e-82
Identities = 141/490 (28%), Positives = 205/490 (41%), Gaps = 39/490 (7%)
Query: 202 VSNFIGGKFVDLRGSATIDVINPA-TQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPV 260
FI GK V + I +NP EV Q+ E DA+ AAK AFPAW++T
Sbjct: 532 YPLFINGKEVR--TNDLIPTVNPNKPSEVLGQICQAGTTEVGDAIAAAKAAFPAWRDTDP 589
Query: 261 ATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGE 320
TR + K + R+ + +L+ +E G A DV ++ +E
Sbjct: 590 RTRAEYLLKAAQAARKRLFELSAWQVLEIGKQWDQAYADVTEAIDFLEYYAREMIRLGQP 649
Query: 321 FVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTS 380
G + F EP GV A I P+NFP + M S A+ GN + KPS
Sbjct: 650 QRVGHAPGELNHYFYEPKGVAAVIAPWNFPLAISMGMASAAIVTGNCVVFKPSGITSIIG 709
Query: 381 MILAALAMEAGLPDGVLNIVHGTNDVI-NHICDDEDIKAISFVASSTASVQMYARAAARG 439
L L EAGLP+GV N G V+ +++ D DI I+F S +++ RAA
Sbjct: 710 WHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERAAKVH 769
Query: 440 ------KRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV- 492
K++ S GGKN II DA +D + ++ + FG G++C+A S V V +V
Sbjct: 770 PGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSR-VIVLDAVY 828
Query: 493 -QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIV 551
++ + LV +AKA KV D + +G V + I + G L
Sbjct: 829 DKFIERLVSMAKATKVGPSEDPANYMGAVADDKAMKSIKEYAEIGKREGHVLYESPVP-- 886
Query: 552 VPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNG--A 609
G FV TI+ + +EEIFGPVL M+A ++AI+ N +F
Sbjct: 887 ---AGEGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAKDFDQAIEWANSTQF--ALTG 941
Query: 610 SIFTSSGLAARKFQNEIEARLVGINVP--------VPSSFSSINESGEFNFCGKSG---- 657
IF+ S K + E + IN P F SG K+G
Sbjct: 942 GIFSRSPEHLAKARREFRVGNLYINRNNTGALVERQP--FGGARMSG---VGTKAGGPDY 996
Query: 658 VQFYTQIKTV 667
+ + + V
Sbjct: 997 LLHFMDPRVV 1006
|
| >1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* Length = 510 | Back alignment and structure |
|---|
Score = 266 bits (682), Expect = 6e-79
Identities = 78/448 (17%), Positives = 145/448 (32%), Gaps = 36/448 (8%)
Query: 211 VDLRGSATIDVINPATQEV-GSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFK 269
++ + N T E P+ T E A AA + ++ + R ++
Sbjct: 1 MNPQTDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRT 60
Query: 270 LQELIRRDIDKLAMNITVEQGTTLKAAQRDV--------LFGLEVVEQACAVATLQIGEF 321
+ + D + +E ++ LF V + A L
Sbjct: 61 IASELEARSDDIIARAHLETALPEVRLTGEIARTANQLRLFADVVNSGSYHQAILDTPNP 120
Query: 322 VPNALCGLDTYCFREPLGVCAGICPFNFPDM--TPLWMFSIAVTCGNTFILKPSEKNPGT 379
L D + LG A NFP + A+ G I+K +PGT
Sbjct: 121 TRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHTAHPGT 180
Query: 380 SMILAALAMEA----GLPDGVLNIVHGTNDVI-NHICDDEDIKAISFVASSTASVQMYAR 434
S I+A +A LP + ++ G + + +IKA+ F S ++
Sbjct: 181 SQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNL 240
Query: 435 AAARGKRVQSNR--GGKNYAIIMPDASIDATLNA--LVSAGFGAAGERCTALSTAVFVGS 490
A R + + G N I P A A V++ G+ CT + +
Sbjct: 241 AHERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNT 300
Query: 491 SVQWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNI 550
+E A++L S + P + S+++ D+G +
Sbjct: 301 PE--TQAFIETAQSLI--RQQSPSTLLTPGIR---DSYQSQVVSRGSDDGIDVTFSQAE- 352
Query: 551 VVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGAS 610
P + FV + + ++EEIFGP L + +++ + + + A+
Sbjct: 353 -SPCVASALFVTSS---ENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTAT 408
Query: 611 IFTSSG--LAARKFQNEIEAR--LVGIN 634
I + + +E + N
Sbjct: 409 IHATEEDYPQVSQLIPRLEEIAGRLVFN 436
|
| >3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} Length = 1001 | Back alignment and structure |
|---|
Score = 252 bits (646), Expect = 3e-70
Identities = 98/439 (22%), Positives = 168/439 (38%), Gaps = 18/439 (4%)
Query: 204 NFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATR 263
N G +F + A + T ++ AV AA+ F W TP R
Sbjct: 515 NSRGVEFGARTALDQLLTDVKAETGDLKPIADATPDQAHAAVAAARAGFAGWSRTPAGIR 574
Query: 264 QRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVA-TLQIGEFV 322
+ + L+ + E G TL A ++ + A L E
Sbjct: 575 AAALEQAAHLLESRSAHFIALLQREGGKTLDDALSELREAADFCRYYAAQGRKLFGSETA 634
Query: 323 PNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMI 382
G GV I P+NFP L + A+ GN+ + KP+E+ P +
Sbjct: 635 MPGPTGESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIARE 694
Query: 383 LAALAMEAGLPDGVLNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAARG--- 439
AL EAG+P L +V G + + DI + F S+ + + AA+
Sbjct: 695 AVALLHEAGIPKSALYLVTGDGRIGAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPI 754
Query: 440 KRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV--QWEDE 497
+ + GG N I A + + +V++ F +AG+RC+AL +FV V + +
Sbjct: 755 VPLIAETGGINAMIADATALPEQVADDVVTSAFRSAGQRCSALRL-LFVQEDVADRMIEM 813
Query: 498 LVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYEN 557
+ A+ LK+ +D + VGPV+ VE K ++ I + R
Sbjct: 814 VAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKT-------EARLHFAGPAPE 866
Query: 558 GNFVGPTILRDVTSNMECYKEEIFGPVLLNM--QADSLEEAIKMVNRNRFVNGASIFTSS 615
G FV P I EE+FGP+L + + ++LE ++ + R + + +
Sbjct: 867 GCFVAPHIFELT--EAGQLTEEVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRI 924
Query: 616 GLAARKFQNEIEARLVGIN 634
+ + ++ + +N
Sbjct: 925 DDSIEAIIDRVQVGNIYVN 943
|
| >3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} Length = 528 | Back alignment and structure |
|---|
Score = 237 bits (607), Expect = 2e-68
Identities = 84/491 (17%), Positives = 160/491 (32%), Gaps = 52/491 (10%)
Query: 177 RPNRSTPVNTSASPSGVSPN-IDNNRVSNFIGGKFVDLRGS-ATIDVINPATQEVGSQVP 234
+ S+ V+ I + + + G+++D G+ A+ PA
Sbjct: 4 HHHHSSGVDLGTENLYFQSMMIFTPKGKHLVAGEWLDGAGTFASAPAHGPAHDF-----A 58
Query: 235 LTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLK 294
+ T E A +AA+ AF + + R + + + I + + + E G
Sbjct: 59 VGTVELVNRACEAAEEAFWTYGYSSRKERAAFLRAIADEIEARAEAITEIGSQETGLPEA 118
Query: 295 AAQRDV--------LFGLEVVEQACAVATLQIGEFVPNA--LCGLDTYCFREPLGVCAGI 344
+ LF + + + +P + + P+G A
Sbjct: 119 RLNGERGRTTGQLRLFADHIEKGDYLDRR--VDAAMPERQPAPRQEIRLVQRPVGPVAVF 176
Query: 345 CPFNFPDM--TPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEA----GLPDGVLN 398
NFP T + A+ G ++K +PGT I+A A G+ GV +
Sbjct: 177 GASNFPLAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFS 236
Query: 399 IVHGTNDVI-NHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNR--GGKNYAIIM 455
++ G + + + + IKA+ F S ++ AAR + + G N ++
Sbjct: 237 LIQGGSRDVGHALVQHPHIKAVGFTGSLAGGRALFDLCAARPEPIPFFGELGSVNPMFLL 296
Query: 456 PDASID---ATLNALVSAGFGAAGERCTALSTAVFVGSSVQWE---DELVELAKALKVNV 509
P+A + AG+ CT V + VE +
Sbjct: 297 PEALKARAETLGQGWAGSLTMGAGQFCTN-PGIAVVIEGADADRFTTAAVEALAKVAPQT 355
Query: 510 GTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDV 569
+ A N LL + G + + T
Sbjct: 356 MLTDGIAKAYRDGQA---------RFATRNAVKPLLATES---SGRDASPNLFETTGAQF 403
Query: 570 TSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSG--LAARKFQNEIE 627
++ EE+FGP+ L ++ S E ++ + A+I +G AR+ + +E
Sbjct: 404 LADHAL-GEEVFGPLGLVVRVGSPAEMEELARGFQGQLTATIHMDAGDLETARRLRPVLE 462
Query: 628 AR--LVGINVP 636
+ V +N
Sbjct: 463 RKAGRVLVNGF 473
|
| >4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A Length = 563 | Back alignment and structure |
|---|
Score = 215 bits (550), Expect = 3e-60
Identities = 91/426 (21%), Positives = 161/426 (37%), Gaps = 50/426 (11%)
Query: 205 FIGGKFVDLRGSATIDVINPA-TQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATR 263
+G + V S ++P ++ A+DAA A W P+A R
Sbjct: 67 VVGDEEV--WTSDIQYQLSPFNHAHKVAKFCYADKALLNRAIDAALAARKEWDLKPMADR 124
Query: 264 QRIMFKLQELIRRD-IDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQAC------AVATL 316
++ K +++ ++ V QG T+ A+ D E A +
Sbjct: 125 AQVFLKAADMLSGPRRAEVLAKTMVGQGKTVIQAEID-----AAAE-LIDFFRFNAKFAV 178
Query: 317 QIGEFVPNALCGL-DTYCFREPLGVCAGICPFNFPDMTPLWMFSI-------AVTCGNTF 368
++ P ++ + +R G A I PFNF +I GN
Sbjct: 179 ELEGEQPISVPPSTNHTVYRGLEGFVAAISPFNFT--------AIGGNLAGAPALMGNVV 230
Query: 369 ILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGTNDVI-NHICDDEDIKAISFVASSTA 427
+ KPS+ S + + EAGLP ++ V + + E + I+F S
Sbjct: 231 LWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPT 290
Query: 428 SVQMYARAAARG------KRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTA 481
++ + A R+ GGKN+ + A +D+ ++ + + F G++C+A
Sbjct: 291 FKHLWRQVAQNLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSA 350
Query: 482 LSTAVFVGSSVQWE---DELVELAKALKV-NVGTDASADVGPVVSVEVKDQISRLIQNAV 537
S +V S+ W L+E +KV + D V+ + +I + +++A
Sbjct: 351 CSRL-YVPKSL-WPQIKGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHAR 408
Query: 538 DNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVL--LNMQADSLEE 595
+ + +L G G +V P I+ KEEIFGPVL D E
Sbjct: 409 SSPSLSILAGGQ---CNESVGYYVEPCIIESKDPQEPIMKEEIFGPVLTVYVYPDDKYRE 465
Query: 596 AIKMVN 601
+K+V+
Sbjct: 466 TLKLVD 471
|
| >3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} Length = 452 | Back alignment and structure |
|---|
Score = 210 bits (536), Expect = 2e-59
Identities = 83/467 (17%), Positives = 158/467 (33%), Gaps = 52/467 (11%)
Query: 233 VPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTT 292
+P+T E + K+A + +I + LA E G
Sbjct: 1 MPVTNMAELDAMIARVKKAQEEFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMG 60
Query: 293 LKAAQ-RDVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPD 351
+ + F E + G + G T EP+G+ GI P P
Sbjct: 61 IVEDKVIKNHFASEFIYNK-YKDEQTCGILEEDDNLGTMTI--AEPVGIICGIVPTTNPT 117
Query: 352 MTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEA----GLPDGVLNIVHG-TNDV 406
T ++ I++ N I P + ++ A L ++A G P ++ + + ++
Sbjct: 118 STAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLDAAVAAGAPKDIIGWIDQPSVEL 177
Query: 407 INHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMPDASIDATLNA 466
N + +DI I T M A + GK G +I A I + +
Sbjct: 178 SNALMKHDDIALILA----TGGPGMVKAAYSSGKPAIGVGAGNVPVVIDETADIKRAVAS 233
Query: 467 LVSAGFGAAGERCTALSTAVFVGSSV--QWEDELVELAKALKVNVGTDASADVGPVVSVE 524
++ + G C + AV V V + ++ + D ++
Sbjct: 234 VLMSKTFDNGVVCAS-EQAVIVVDEVYDEVKERFASHKAHVLSKTDADKVRK-VLLIDGA 291
Query: 525 VKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPV 584
+ +I V A+ + + + VP + + L V+ + + E P
Sbjct: 292 LNAKI-------VGQPATAIAEMAGVKVP--ADTKVLIGEGLGKVSYDD-AFAHEKLSPT 341
Query: 585 LLNMQADSLEEAIKMVNRNRFVNG----ASIFTSSGLA---ARKFQNEIEARLVGINVPV 637
L +AD+ E+A+ + G + ++T+ + R F ++++ + IN +
Sbjct: 342 LGMFRADNFEDAVAQAVTMVEIGGIGHTSGLYTNQDVNADRIRYFGDKMKTARILIN--I 399
Query: 638 PSSFSSINESGEFNF-------CGKSG---------VQFYTQIKTVA 668
P++ I + FN CG G + KTVA
Sbjct: 400 PTTHGGIGDLYNFNVAPSLTLGCGSWGGNSISENVGPKHLINKKTVA 446
|
| >3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} Length = 464 | Back alignment and structure |
|---|
Score = 205 bits (524), Expect = 9e-58
Identities = 74/465 (15%), Positives = 151/465 (32%), Gaps = 45/465 (9%)
Query: 235 LTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLK 294
L + +E ++ +++A +A I+ + + +KLA E G +
Sbjct: 8 LRSIQEVRNLIESANKAQKELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIW 67
Query: 295 AAQRDVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTP 354
+ V+ + + + PLGV AG+ P P T
Sbjct: 68 QDK--VIKNVFASKHVYNYIKDMKTIGMLKEDNEKKVMEVAVPLGVVAGLIPSTNPTSTV 125
Query: 355 LWMFSIAVTCGNTFILKPSEKNPGTSM----ILAALAMEAGLPDGVLNIVHG-TNDVINH 409
++ I++ GN+ + P + I++ A +AG P G ++ + T +
Sbjct: 126 IYKTLISIKAGNSIVFSPHPNALKAILETVRIISEAAEKAGCPKGAISCMTVPTIQGTDQ 185
Query: 410 ICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMPDASIDATLNALVS 469
+ +D I T M A + G G A I A+I + ++
Sbjct: 186 LMKHKDTAVILA----TGGSAMVKAAYSSGTPAIGVGPGNGPAFIERSANIPRAVKHILD 241
Query: 470 AGFGAAGERCTALSTAVFVGSSVQWEDELV-ELAKALKVNVGTDASADVGPVVSVEVKDQ 528
+ G C + +V V + + ++ E K + + +G +
Sbjct: 242 SKTFDNGTICASEQ-SVVVERVNK--EAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSM 298
Query: 529 ISRLIQNAVDNGASLLLDGRNIVVPGYENGNF-VGPTILRDVTSNMECYKEEIFGPVLLN 587
++ +V + A+L + VP + + Y E P+L
Sbjct: 299 NPAIVGKSVQHIANLA----GLTVP--ADARVLIAEE---TKVGAKIPYSREKLAPILAF 349
Query: 588 MQADSLEEAIKMVNRNRFVNG----ASIFTSSGLAARKFQNEIEARLVGINVPVPSSFSS 643
A++ +EA ++ + G I + R+F + + +N P +
Sbjct: 350 YTAETWQEACELSMDILYHEGAGHTLIIHSEDKEIIREFALKKPVSRLLVN--TPGALGG 407
Query: 644 INESGEFNF-----CG---KSGV------QFYTQIKTVAQQWNDL 674
I + CG S + I+ +A +L
Sbjct: 408 IGATTNLVPALTLGCGAVGGSSSSDNIGPENLFNIRRIATGVLEL 452
|
| >3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} PDB: 3szb_A* 1ad3_A* Length = 469 | Back alignment and structure |
|---|
Score = 119 bits (300), Expect = 2e-28
Identities = 107/488 (21%), Positives = 190/488 (38%), Gaps = 100/488 (20%)
Query: 236 TTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKA 295
+ + +AV A+ AF + + P+ R + + LQ LI+ +L + A
Sbjct: 15 SHMSKISEAVKRARAAFSSGRTRPLQFRIQQLEALQRLIQEQEQEL-----------VGA 63
Query: 296 AQRD--------VLFGLEVVEQACAVATLQIGEF-------VPNALCGLDTYCFREPLGV 340
D + V + ++ E+ + Y EPLGV
Sbjct: 64 LAADLHKNEWNAYYEEVVYVLEEIEYMIQKLPEWAADEPVEKTPQTQQDELYIHSEPLGV 123
Query: 341 CAGICPFNFP---DMTPLWMFSI-AVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGV 396
I +N+P + P+ + A+ GN +LKPSE + + +LA + + L +
Sbjct: 124 VLVIGTWNYPFNLTIQPM----VGAIAAGNAVVLKPSELSENMASLLATI-IPQYLDKDL 178
Query: 397 LNIVHGTNDVI--------NHICDDEDIKAISFVASSTASVQ---MYARAAARGKRVQSN 445
+++G +HI + T S + AAA+ +
Sbjct: 179 YPVINGGVPETTELLKERFDHIL---------Y----TGSTGVGKIIMTAAAK------H 219
Query: 446 R-------GGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWEDEL 498
GGK+ + + +D + F +G+ C A + S+Q +++
Sbjct: 220 LTPVTLELGGKSPCYVDKNCDLDVACRRIAWGKFMNSGQTCVAPDY-ILCDPSIQ--NQI 276
Query: 499 VE-LAKALKVNVGTDA--SADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGY 555
VE L K+LK G DA S D G ++S R++ L++G+ + G
Sbjct: 277 VEKLKKSLKEFYGEDAKKSRDYGRIIS---ARHFQRVMG---------LIEGQKVAYGGT 324
Query: 556 --ENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFT 613
++ PTIL DV +EEIFGPVL + SLEEAI+ +N+ +F+
Sbjct: 325 GDAATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLALYMFS 384
Query: 614 SSGLAARKFQNEIEARLVGIN-----VPVPSS-FSSINESGEFNFCGKSGVQFYTQIKTV 667
S+ +K E + V N + + S F + SG ++ GK + ++ ++
Sbjct: 385 SNDKVIKKMIAETSSGGVAANDVIVHITLHSLPFGGVGNSGMGSYHGKKSFETFSHRRSC 444
Query: 668 AQQ--WND 673
+ ND
Sbjct: 445 LVRPLMND 452
|
| >3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A* Length = 457 | Back alignment and structure |
|---|
Score = 101 bits (254), Expect = 1e-22
Identities = 100/494 (20%), Positives = 178/494 (36%), Gaps = 95/494 (19%)
Query: 223 NPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLA 282
+ + + + + A K F V R++ + +L+E + + + L
Sbjct: 12 SGHIDDDDKHMNYLSPAKIDSLFSAQKAYFATRATADVGFRKQSLERLKEAVINNKEALY 71
Query: 283 MNITVEQGTTLKAAQRDVLFG----------LEVVEQACAVATLQIGEF-------VPNA 325
A D G + V A + E+ P+
Sbjct: 72 -----------SALAED--LGKPKDVVDLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDI 118
Query: 326 LCGLDTYCFREPLGVCAGICPFNFP---DMTPLWMFSI-AVTCGNTFILKPSEKNPGTSM 381
+ + Y +EP GV I PFN+P +TPL I A+ GNT I+KPSE P TS
Sbjct: 119 IAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPL----IGAIIGGNTCIIKPSETTPETSA 174
Query: 382 ILAALAMEAGLPDGVLNIVHGTNDVI--------NHICDDEDIKAISFVASSTASVQ--- 430
++ + + + ++ G D + I F T S
Sbjct: 175 VIEKI-IAEAFAPEYVAVIQGGRDENSHLLSLPFDFIF---------F----TGSPNVGK 220
Query: 431 MYARAAARGKRVQSNR-------GGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALS 483
+ +AAA+ + GGK I++PDA +D T+N L+ F +G+ T ++
Sbjct: 221 VVMQAAAK------HLTPVVLELGGKCPLIVLPDADLDQTVNQLMFGKFINSGQ--TXIA 272
Query: 484 TAVFVGSSVQWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASL 543
+ L L + +K + G +V+ ++ L++ +
Sbjct: 273 PDYLYVHYSVKDALLERLVERVKTELPE--INSTGKLVTERQVQRLVSLLE---ATQGQV 327
Query: 544 LLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRN 603
L+ + + + T++ V N EE+FGP+L ++ DS+ AI VN++
Sbjct: 328 LVGSQAD-----VSKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKH 382
Query: 604 RFVN-GASIFTSSGLAARKFQNEIEARLVGIN-----VPVPS-SFSSINESGEFNFCGKS 656
+F A+ N+I++ +N P F I SG + G
Sbjct: 383 HPKPLAVYVFGKDMDVAKGIINQIQSGDAQVNGVMLHAFSPYLPFGGIGASGMGEYHGHF 442
Query: 657 GVQFYTQIKTVAQQ 670
+T K+V
Sbjct: 443 SYLTFTHKKSVRIV 456
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 64.5 bits (156), Expect = 1e-10
Identities = 101/824 (12%), Positives = 214/824 (25%), Gaps = 308/824 (37%)
Query: 100 HNHEPFKDMSEHPYSRR---------FSEE-EVKQIKLMTEAGIKPRQVLKALKQSNPEL 149
H+H F + EH Y + F + + K ++ M ++ + ++ + +
Sbjct: 4 HHHMDF-ETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVS 62
Query: 150 QSTPRHLYN-LKAKIRQGNLSEKSFKSWRPNRSTPVNTSASPSGVSPNIDNNRVSNFIGG 208
+ L+ L +K Q + +K + + N F+
Sbjct: 63 GT--LRLFWTLLSK--QEEMVQKFVEE----------------VLRINYK------FLMS 96
Query: 209 KFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMF 268
T++ + Y E +D + + F + V +R +
Sbjct: 97 PI--------------KTEQRQPSMMTRMYIEQRDRLYNDNQVFAKY---NV-SRLQPYL 138
Query: 269 KLQELIRRDIDKLAMNITVEQG------TTLKAAQRDVLFGLEVVEQ-ACAVATLQIGEF 321
KL++ + + A N+ + G T + A DV +V + + L +
Sbjct: 139 KLRQALLEL--RPAKNVLI-DGVLGSGKTWV-AL--DVCLSYKVQCKMDFKIFWLNLKN- 191
Query: 322 VPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSM 381
C + L + T S
Sbjct: 192 -----------CNSPET------------VLEMLQKLLYQIDPNWTSRSDHSSNIKLRIH 228
Query: 382 ILAA----LAMEAGLPDGVLNIVHGTNDVINHICDDEDIKAISF-----VASSTASVQMY 432
+ A L + +L V+ ++ + + A + + + V
Sbjct: 229 SIQAELRRLLKSKPYENCLL--------VLLNVQNAKAWNAFNLSCKILLTTRFKQV-TD 279
Query: 433 ARAAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV 492
+AA + + S
Sbjct: 280 FLSAATTTHISLDH---------------------HSMTLT------------------- 299
Query: 493 QWEDELVEL-AKALKVNVGTDAS--ADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRN 549
DE+ L K L P +S +I S
Sbjct: 300 --PDEVKSLLLKYLDCRPQDLPREVLTTNPRR-------LS-II------AES------- 336
Query: 550 IVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKM-VN------- 601
+RD + + +K ++ D L I+ +N
Sbjct: 337 ----------------IRDGLATWDNWK---------HVNCDKLTTIIESSLNVLEPAEY 371
Query: 602 RNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPVPSSFSSI-------NESGEF-NFC 653
R F S+F + +P+ S+ ++ N
Sbjct: 372 RKMFDR-LSVF-------PP------------SAHIPTILLSLIWFDVIKSDVMVVVNKL 411
Query: 654 GKSGVQFYTQIKTVAQQWND-----LPKLGMPLTMPLSSETDMRSQGVSSV-FPQSSERE 707
K ++ ++ +P + + L + L +E + V P++ + +
Sbjct: 412 HK---------YSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSD 462
Query: 708 SPSPRVSPA------------MSSA--SERDSPSHEVLLSIPFTSERELSDPGVSSLSPT 753
P P + + ER + V L F E+++ + +
Sbjct: 463 DLIP---PYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFL-EQKIRHDSTAWNASG 518
Query: 754 ANVDLPVQGVSLFTSPIIMDLSNRETSLAMPSATVGDLSSQVLSLPMPQTSERLYMLQTS 813
+ ++ +Q + + I + E V + + P+ E L
Sbjct: 519 SILNT-LQQLKFYKPYICDNDPKYE-------RLVNAILDFL-----PKIEENL------ 559
Query: 814 NWKSPPITSRRTD----AIHPPSERIYMPCTSQRNDNTARTSQR 853
I S+ TD A+ E I+ + + QR
Sbjct: 560 ------ICSKYTDLLRIALMAEDEAIF--------EEAHKQVQR 589
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 59.9 bits (144), Expect = 4e-09
Identities = 65/511 (12%), Positives = 143/511 (27%), Gaps = 182/511 (35%)
Query: 17 REDLIKHVRDFGTNQGYVVTIKKSRKDRRVIL------------GCDRG-GVYRNRRKID 63
++ DF + + +K V+ R + +I
Sbjct: 172 LSYKVQCKMDFKI---FWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIH 228
Query: 64 ENKRKRKACSRLINCPFEAIGKKE----DDVW---------------VLT--------IK 96
+ + + RL+ + +V + T +
Sbjct: 229 SIQAELR---RLL---KSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLS 282
Query: 97 NGEHNHEPFKDMSEHPYSRRFSEEEVKQIKLMTEAGIK----PRQVLKALKQSNPELQST 152
H S + +EVK + L+ + PR+VL +
Sbjct: 283 AATTTHISLDHHSM-----TLTPDEVKSL-LLKYLDCRPQDLPREVLT----------TN 326
Query: 153 PRHLYNLKAKIRQGNLSEKSFKSWRPNRSTPVNTSASPSGVSPNIDNNRVSNFIGGKFVD 212
PR L + IR G ++ +W+ +++ ++++ I
Sbjct: 327 PRRLSIIAESIRDGL---ATWDNWK------------------HVNCDKLTTII------ 359
Query: 213 LRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPA------------WKNTPV 260
++++V+ PA ++ +V FP W +
Sbjct: 360 ---ESSLNVLEPAEYR-------KMFDRL--SV------FPPSAHIPTILLSLIWFDVIK 401
Query: 261 ATRQRIMFKLQE--LIRRDIDKLAMNI-TVEQGTTLKAAQRDVLFGLEVVEQACAVATLQ 317
+ ++ KL + L+ + + ++I ++ +K L +V+ T
Sbjct: 402 SDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHR-SIVDHYNIPKTFD 460
Query: 318 IGEFVPNALCGLDTY-------------------CFREPLGVCAGICPFNFPD-----MT 353
+ +P LD Y FR F F + +
Sbjct: 461 SDDLIPPY---LDQYFYSHIGHHLKNIEHPERMTLFRMVF------LDFRFLEQKIRHDS 511
Query: 354 PLWMFSIAVTCGNTFI-LKP-----SEKNPGTSMILAALAMEAGLPDGVLNIVHGTNDVI 407
W S ++ NT LK + +P ++ A+ L+ + + +
Sbjct: 512 TAWNASGSIL--NTLQQLKFYKPYICDNDPKYERLVNAI----------LDFLPKIEENL 559
Query: 408 NHICDDEDIKAISFVASSTASVQMYARAAAR 438
D+ I+ +A A + + R
Sbjct: 560 -ICSKYTDLLRIALMAEDEAIFEEAHKQVQR 589
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 1035 | ||||
| d1a4sa_ | 503 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-115 | |
| d1bxsa_ | 494 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-115 | |
| d1o04a_ | 494 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-114 | |
| d1wnda_ | 474 | c.82.1.1 (A:) Putative betaine aldehyde dehydrogen | 6e-91 | |
| d1euha_ | 474 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-84 | |
| d1uzba_ | 516 | c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogen | 3e-80 | |
| d1ky8a_ | 499 | c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3 | 2e-68 | |
| d1ad3a_ | 446 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 7e-61 | |
| d1ez0a_ | 504 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-34 | |
| d1o20a_ | 414 | c.82.1.1 (A:) Gamma-glutamyl phosphate reductase { | 6e-28 | |
| d1vlua_ | 436 | c.82.1.1 (A:) Gamma-glutamyl phosphate reductase { | 2e-19 |
| >d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} Length = 503 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Baltic cod (Gadus callarias) [TaxId: 8053]
Score = 362 bits (931), Expect = e-115
Identities = 144/499 (28%), Positives = 231/499 (46%), Gaps = 9/499 (1%)
Query: 187 SASPSGVSPNIDNNRVSNFIGGKFVDLRGSATID-VINPATQEVGSQVPLTTYEEFKDAV 245
+ PS + ++ N+ GG+ + + AT + V PAT V Q+ EE AV
Sbjct: 5 DSMPSASTGSVVVTDDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAV 64
Query: 246 DAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLE 305
+A+ A+ W R R+M + +IR D +A + G T+ A+ D+ +
Sbjct: 65 QSAQAAYLKWSKMAGIERSRVMLEAARIIRERRDNIAKLEVINNGKTITEAEYDIDAAWQ 124
Query: 306 VVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCG 365
+E +A G+ + G Y REPLGVCAGI +N+P M W + A+ CG
Sbjct: 125 CIEYYAGLAPTLSGQHIQLP-GGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACG 183
Query: 366 NTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGTNDVINHICDDEDIKAISFVASS 425
N + KPS P T +ILA + EAG+P G++N+V G + + +C ++ +SF S
Sbjct: 184 NAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQGGAETGSLLCHHPNVAKVSFTGSV 243
Query: 426 TASVQMYARAAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCT-ALST 484
++ +A K V GGK+ +I D ++ + + A F G+ CT
Sbjct: 244 PTGKKVMEMSAKTVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRV 303
Query: 485 AVFVGSSVQWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLL 544
V Q+ +E+V+ KA+ V +G ++S D++ + A GA +L
Sbjct: 304 FVQREIMPQFLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVL 363
Query: 545 LDGRNIVV--PGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNR 602
G + P +NG F+ P +L + +M C KEEIFGPV+ + D+ EE ++ N
Sbjct: 364 CGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANN 423
Query: 603 NRFVNGASIFTSSGLAARKFQNEIEARLVGINV----PVPSSFSSINESGEFNFCGKSGV 658
F + +FT A + +EA IN PV F SG G++ V
Sbjct: 424 TTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSISPVEVPFGGYKMSGFGRENGQATV 483
Query: 659 QFYTQIKTVAQQWNDLPKL 677
+Y+Q+KTV + D+ L
Sbjct: 484 DYYSQLKTVIVEMGDVDSL 502
|
| >d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} Length = 494 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Sheep (Ovis aries) [TaxId: 9940]
Score = 362 bits (929), Expect = e-115
Identities = 145/479 (30%), Positives = 211/479 (44%), Gaps = 14/479 (2%)
Query: 205 FIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAF---PAWKNTPVA 261
FI ++ V NPAT+E +V E+ AV AA++AF W+ +
Sbjct: 17 FINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDAS 76
Query: 262 TRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEF 321
R R++ KL +LI RD LA + G A L G + CA +I
Sbjct: 77 ERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGR 136
Query: 322 VPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSM 381
TY EP+GVC I P+NFP + LW A++CGNT ++KP+E+ P T++
Sbjct: 137 TIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTAL 196
Query: 382 ILAALAMEAGLPDGVLNIVHGTNDVI-NHICDDEDIKAISFVASSTASVQMYARAA-ARG 439
+ +L EAG P GV+NIV G I D+ ++F S+ + A +
Sbjct: 197 HMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGKSNL 256
Query: 440 KRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDEL 498
KRV GGK+ I+ DA +D + F G+ C A S S ++
Sbjct: 257 KRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRS 316
Query: 499 VELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENG 558
VE AK + GP + E ++I LI++ GA L G P G
Sbjct: 317 VERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGG----PWGNKG 372
Query: 559 NFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLA 618
F+ PT+ DVT +M KEEIFGPV M+ SL++ IK N + A IFT+
Sbjct: 373 YFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDK 432
Query: 619 ARKFQNEIEARLVGINVPVPSS----FSSINESGEFNFCGKSGVQFYTQIKTVAQQWND 673
A + +++ V +N S F SG G+ G YT++KTV + +
Sbjct: 433 AITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVTIKISQ 491
|
| >d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Length = 494 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Human (Homo sapiens), mitochondrial [TaxId: 9606]
Score = 360 bits (924), Expect = e-114
Identities = 140/478 (29%), Positives = 210/478 (43%), Gaps = 16/478 (3%)
Query: 205 FIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAF---PAWKNTPVA 261
FI ++ D T +NP+T EV QV E+ AV AA+ AF W+ +
Sbjct: 17 FINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDAS 76
Query: 262 TRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKA-AQRDVLFGLEVVEQACAVATLQIGE 320
R R++ +L +LI RD LA T++ G D+ L+ + A G+
Sbjct: 77 HRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGK 136
Query: 321 FVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTS 380
+P +Y EP+GVC I P+NFP + W A+ GN ++K +E+ P T+
Sbjct: 137 TIPID-GDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTA 195
Query: 381 MILAALAMEAGLPDGVLNIVHGTNDVI-NHICDDEDIKAISFVASSTASVQMYARAAAR- 438
+ +A L EAG P GV+NIV G I ED+ ++F S+ + A +
Sbjct: 196 LYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSN 255
Query: 439 GKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDE 497
KRV GGK+ IIM DA +D + A F G+ A S ++ +
Sbjct: 256 LKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVER 315
Query: 498 LVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYEN 557
V AK+ V D+ + GP V +I I GA LL G +
Sbjct: 316 SVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGG----IAADR 371
Query: 558 GNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGL 617
G F+ PT+ DV M KEEIFGPV+ ++ ++EE + N + + A++FT
Sbjct: 372 GYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLD 431
Query: 618 AARKFQNEIEARLVGINVPVPSS----FSSINESGEFNFCGKSGVQFYTQIKTVAQQW 671
A ++A V +N F SG G+ G+Q YT++KTV +
Sbjct: 432 KANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVTVKV 489
|
| >d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} Length = 474 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Putative betaine aldehyde dehydrogenase YdcW species: Escherichia coli [TaxId: 562]
Score = 297 bits (760), Expect = 6e-91
Identities = 118/471 (25%), Positives = 199/471 (42%), Gaps = 12/471 (2%)
Query: 204 NFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATR 263
I G+ V G V NPAT +V ++ + E+ AV AA AF W T R
Sbjct: 5 LLINGELVSGEG-EKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPKVR 63
Query: 264 QRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVP 323
+ KL ++I + A + G L +A D + + V + A A +
Sbjct: 64 AECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAA 123
Query: 324 NALC-GLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMI 382
G + R+PLGV A I P+N+P M W + A+ GN +LKPSE P T++
Sbjct: 124 GEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALK 183
Query: 383 LAALAMEAGLPDGVLNIVHGT-NDVINHICDDEDIKAISFVASSTASVQMYARAAARGKR 441
LA LA + P GV+NI+ G V + + ++ +S S + + A+ KR
Sbjct: 184 LAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTASSIKR 242
Query: 442 VQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVE 500
GGK I+ DA I+A + + + G+ AG+ CTA ++L
Sbjct: 243 THMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGA 302
Query: 501 LAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNF 560
LK D S ++GP+ S+ +++ + ++ A G ++ G NG +
Sbjct: 303 AVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGE---KRKGNGYY 359
Query: 561 VGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAAR 620
PT+L + ++E+FGPV+ D+ E+ + N +++ +S++T A
Sbjct: 360 YAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAH 419
Query: 621 KFQNEIEARLVGINVPVPSS----FSSINESGEFNFCGKSGVQFYTQIKTV 667
+ ++ +N SG G++ YT ++ V
Sbjct: 420 RVSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHV 470
|
| >d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} Length = 474 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Streptococcus mutans [TaxId: 1309]
Score = 279 bits (714), Expect = 1e-84
Identities = 120/475 (25%), Positives = 212/475 (44%), Gaps = 22/475 (4%)
Query: 204 NFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATR 263
N++ G++ I + PA+ VP + EE +AK+A PAW+ R
Sbjct: 6 NYVNGEWKL--SENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIER 63
Query: 264 QRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVA-----TLQI 318
+ K+ +++ RD +K+ ++ E K+A +V+ E++ A +
Sbjct: 64 AAYLHKVADILMRDKEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVLE 123
Query: 319 GEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPG 378
G A REP+G+ I PFN+P + A+ GN KP +
Sbjct: 124 GGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSI 183
Query: 379 TSMILAALAMEAGLPDGVLNIVHGT-NDVINHICDDEDIKAISFVASSTASVQMYARAAA 437
+ ++LA EAGLP GV N + G +++ ++I + + + I+F + + + A
Sbjct: 184 SGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINF--TGSTGIGERIGKMA 241
Query: 438 RGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWEDE 497
+ + GGK+ AI++ DA ++ T +++ FG +G+RCTA+ + + S E
Sbjct: 242 GMRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVE 301
Query: 498 LVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYEN 557
+ + AD+ P++ + D + LI +A D GA+ +
Sbjct: 302 KIREKVLALTIGNPEDDADITPLIDTKSADYVEGLINDANDKGAT-------ALTEIKRE 354
Query: 558 GNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGL 617
GN + P + VT++M EE FGPVL ++ S+EEAI++ N++ + ASIFT+
Sbjct: 355 GNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFP 414
Query: 618 AARKFQNEIEARLVGINVPVPSS-----FSSINESGEFNFCGKSGVQFYTQIKTV 667
A ++E V IN F +SG K ++ T +K+V
Sbjct: 415 RAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSV 469
|
| >d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 516 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: 1-pyrroline-5-carboxylate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Score = 269 bits (687), Expect = 3e-80
Identities = 124/488 (25%), Positives = 207/488 (42%), Gaps = 25/488 (5%)
Query: 201 RVSNFIGGKFVDLRGSATIDVINP-ATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTP 259
+IGG++VD + +NP A EV E + A++AA +AF WK+ P
Sbjct: 37 HYPLYIGGEWVD--TKERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFKTWKDWP 94
Query: 260 VATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVA-TLQI 318
R R++ K L+RR +L + E G A DV ++ +E A +
Sbjct: 95 QEDRSRLLLKAAALMRRRKRELEATLVYEVGKNWVEASADVAEAIDFIEYYARAALRYRY 154
Query: 319 GEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPG 378
G D F PLG I P+NFP M V GNT I KP+E
Sbjct: 155 PAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVV 214
Query: 379 TSMILAALAMEAGLPDGVLNIVHGTN-DVINHICDDEDIKAISFVASSTASVQMYARA-- 435
+ + EAG P GV+N + G +V ++ + I+ I+F S +++Y A
Sbjct: 215 VGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGR 274
Query: 436 ----AARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGS- 490
KR GGKN I+ A D +V + +G G++C+A S +
Sbjct: 275 LAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGA 334
Query: 491 SVQWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNI 550
+ +++ A+ L V + + D+GPVVS E + ++ I+ + G L+L G+ +
Sbjct: 335 YEPVLERVLKRAERLSVGPA-EENPDLGPVVSAEQERKVLSYIEIGKNEGQ-LVLGGKRL 392
Query: 551 VVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGAS 610
GY F+ PT+ +V +EEIFGPVL ++ EA+++ N +
Sbjct: 393 EGEGY----FIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGG 448
Query: 611 IFTSSGLAARKFQNEIEARLVGINVPVPSS------FSSINESGEFNFCGK-SGVQFYTQ 663
+++ + E + N + + F SG G ++ + +
Sbjct: 449 VYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLE 508
Query: 664 IKTVAQQW 671
+K VA+++
Sbjct: 509 MKAVAERF 516
|
| >d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} Length = 499 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN species: Archaeon Thermoproteus tenax [TaxId: 2271]
Score = 236 bits (601), Expect = 2e-68
Identities = 103/479 (21%), Positives = 201/479 (41%), Gaps = 18/479 (3%)
Query: 204 NFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFP-AWKNTPVAT 262
+++ G++ I+V +P ++V + EE + +D + + ++ P
Sbjct: 19 SYLAGEWGG--SGQEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRWSARDMPGTE 76
Query: 263 RQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQ----ACAVATLQI 318
R ++ K ++I R++D A + + G AA +V ++ + + I
Sbjct: 77 RLAVLRKAADIIERNLDVFAEVLVMNAGKPKSAAVGEVKAAVDRLRLAELDLKKIGGDYI 136
Query: 319 GEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPG 378
+ REPLGV A I PFN+P + + + GN ++KPS +P
Sbjct: 137 PGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPL 196
Query: 379 TSMILAALAMEAGLPDGVLNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAAR 438
+ + ++AG P + +++ I D+ + A+SF S+ ++
Sbjct: 197 PAAMAVKALLDAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGERVVKVGGV- 255
Query: 439 GKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDE 497
K+ GG + AI++ DA +D + + + AG+RC A+ + + +E
Sbjct: 256 -KQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEE 314
Query: 498 LVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYEN 557
+ + +L+V D + DVGP++S D++ I++AV+ G +L GR + +
Sbjct: 315 VAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLGPTYVQP 374
Query: 558 GNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGL 617
P +M YK E+F PV ++ L++AI++ N + A++F +
Sbjct: 375 TLVEAPADRVK---DMVLYKREVFAPVASAVEVKDLDQAIELANGRPYGLDAAVFGRDVV 431
Query: 618 AARKFQNEIEARLVGINVPVPSS-----FSSINESGEFNFCGKSGVQFYTQIKTVAQQW 671
R+ +E + IN F +SG F V+ T KT+ +
Sbjct: 432 KIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIVFNY 490
|
| >d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 446 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 212 bits (541), Expect = 7e-61
Identities = 96/445 (21%), Positives = 168/445 (37%), Gaps = 24/445 (5%)
Query: 243 DAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLK-AAQRDVL 301
D V A+ AF + K + R + + LQ +I ++ ++ + + G + +V
Sbjct: 4 DTVKRAREAFNSGKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYYEEVA 63
Query: 302 FGLEVVEQACAVATLQIGEF---VPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMF 358
LE ++ + D Y EPLGV I +N+P +
Sbjct: 64 HVLEELDTTIKELPDWAEDEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLTIQPM 123
Query: 359 SIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGTNDVINHICDDEDIKA 418
AV GN ILKPSE + + +LA L + + L + G + + + D
Sbjct: 124 VGAVAAGNAVILKPSEVSGHMADLLATLIPQYMDQNLYLVVKGGVPETTELLKERFDH-- 181
Query: 419 ISFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGER 478
I + S+ + A AA V GGK+ + D +D + F +G+
Sbjct: 182 IMYTGSTAVGKIVMAAAAKHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKFMNSGQT 241
Query: 479 CTALSTAVFVGSSVQWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVD 538
C A + S E ++ + S D G +++ ++ LI N
Sbjct: 242 CVAPDYILCDPSIQNQIVEKLKKSLKDFYGEDAKQSRDYGRIINDRHFQRVKGLIDNQKV 301
Query: 539 NGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIK 598
++ PTIL DV +EEIFGPV+ + SLEEAI+
Sbjct: 302 AHGGTWDQS----------SRYIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRSLEEAIQ 351
Query: 599 MVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGIN-----VPVPS-SFSSINESGEFNF 652
+N+ +F+++ +K E + V N + VP+ F + SG +
Sbjct: 352 FINQREKPLALYVFSNNEKVIKKMIAETSSGGVTANDVIVHITVPTLPFGGVGNSGMGAY 411
Query: 653 CGKSGVQFYTQIKTVAQQ--WNDLP 675
GK + ++ ++ + N+
Sbjct: 412 HGKKSFETFSHRRSCLVKSLLNEEA 436
|
| >d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]} Length = 504 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Vibrio harveyi [TaxId: 669]
Score = 137 bits (345), Expect = 1e-34
Identities = 62/498 (12%), Positives = 124/498 (24%), Gaps = 36/498 (7%)
Query: 218 TIDVINPATQEV-GSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRR 276
N T E P+ T E A AA + ++ + R ++ + +
Sbjct: 4 VFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASELEA 63
Query: 277 DIDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVP--------NALCG 328
D + +E ++ + V L
Sbjct: 64 RSDDIIARAHLETALPEVRLTGEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPK 123
Query: 329 LDTYCFREPLGVCAGICPFNFPDMTPLWMFSIA--VTCGNTFILKPSEKNPGTSMILAAL 386
D + LG A NFP A + G I+K +PGTS I+A
Sbjct: 124 PDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHTAHPGTSQIVAEC 183
Query: 387 AMEAGLPDGVLNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNR 446
+A + + + + A RA +
Sbjct: 184 IEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHERPEP 243
Query: 447 GGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWEDELVELAKALK 506
+ + + A + F +A
Sbjct: 244 IPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFI 303
Query: 507 VNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTIL 566
+ + + + + + + P + FV +
Sbjct: 304 ETAQSLIRQQSPSTLLTPGIRDSYQSQVVSRGSDDGIDVTFSQAESPCVASALFVTSS-- 361
Query: 567 RDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSG--LAARKFQN 624
+ ++EEIFGP L + +++ + + + A+I + +
Sbjct: 362 -ENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIP 420
Query: 625 EIEAR--LVGIN-----VPVPSS------FSSINESGEFNFCGKSGVQFYTQIKTVAQQW 671
+E + N V V + + + S G + + + Q
Sbjct: 421 RLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSA-STSVGAEAIHRWLRPVAY-QAL 478
Query: 672 ND--LP---KLGMPLTMP 684
+ LP K PL +
Sbjct: 479 PESLLPDSLKAENPLEIA 496
|
| >d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} Length = 414 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Thermotoga maritima [TaxId: 2336]
Score = 115 bits (288), Expect = 6e-28
Identities = 52/454 (11%), Positives = 127/454 (27%), Gaps = 74/454 (16%)
Query: 239 EEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQR 298
+E + + A+ +N + + + K+ E + ++ ++ + +
Sbjct: 1 DELLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVK 60
Query: 299 DVLFG------------LEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICP 346
+ L ++ E + +
Sbjct: 61 ESLVDRLALNDKRIDEMIKACETVIGLKDPVGEVIDSWVREDGLRIARVRV-PIGPIGII 119
Query: 347 FNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGTNDV 406
+ + +A+ GNT +L+ ++ + + EA + +
Sbjct: 120 YESRPNVTVETTILALKSGNTILLRGGSDALNSNKAIVSAIREALKETEIPESSVEFIEN 179
Query: 407 INHICDDEDI--KAISFVASSTASVQMYARAAARGKRVQSNRGGK-NYAIIMPDASIDAT 463
+ E I + + + + G + + A +
Sbjct: 180 TDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNATVPVLETGVGNCHIFVDESADLKKA 239
Query: 464 LNALVSAGFGAAGERCTALSTAVFVGSSVQWEDELVELAKALKVNVGTDASADVGPVVSV 523
+ +++A G A V + ++ +VE + V V
Sbjct: 240 VPVIINAKTQRPGTCNAAEKLLVHEKIAKEFLPVIVEELRKHGVEVRGC----------- 288
Query: 524 EVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGP 583
E + P + V + + + E
Sbjct: 289 --------------------------------EKTREIVPDV---VPATEDDWPTEYLDL 313
Query: 584 VLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPVPSSFSS 643
++ +++EAI+ + + + SI T + A+KF +EI+A V +N + F+
Sbjct: 314 IIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAKKFVSEIDAAAVYVN--ASTRFTD 371
Query: 644 INESG----------EFNFCGKSGVQFYTQIKTV 667
+ G F+ G G++ T K V
Sbjct: 372 GGQFGFGAEIGISTQRFHARGPVGLRELTTYKFV 405
|
| >d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 436 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 89.9 bits (222), Expect = 2e-19
Identities = 55/415 (13%), Positives = 124/415 (29%), Gaps = 54/415 (13%)
Query: 242 KDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKL----AMNITVEQGTTLKAAQ 297
+ A++A K R I++K+ + ++ + + +++ V + T L +
Sbjct: 6 QQIAKNARKAGNILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSL 65
Query: 298 RDVLFGLEVVE-QACAVATLQIGEFVPNALCGLDTYCFREPLGVC-------AGICPFNF 349
L + + + + E + L + + F
Sbjct: 66 LKRLDLFKGDKFEVMLQGIKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVIFES 125
Query: 350 PDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAM--------EAGLPDGVLNIVH 401
+ ++++ GN ILK +++ T +A + E G+P G + ++
Sbjct: 126 RPEVIANITALSIKSGNAAILKGGKESVNTFREMAKIVNDTIAQFQSETGVPVGSVQLIE 185
Query: 402 GTNDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMPDASID 461
DV + + DE I + S+ ++ V + G + DA +
Sbjct: 186 TRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT---KIPVLGHADGICSIYLDEDADLI 242
Query: 462 ATLNALVSAGFGAAGERCTALSTAVFVGSSVQWEDELVELAKALKVNVGTDASADVGPVV 521
+ A + + S WE + V
Sbjct: 243 KAKRISLDAKTNYPAGCNAMETLLINPKFSKWWEVLENLTLEG---------------GV 287
Query: 522 SVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIF 581
++ + + ++ G T+ + + +E
Sbjct: 288 TIHATKDLKTAYFDKLNEL-------------GKLTEAIQCKTV---DADEEQDFDKEFL 331
Query: 582 GPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVP 636
L S E AI+ +N + + +I T + A KF +++ V N
Sbjct: 332 SLDLAAKFVTSTESAIQHINTHSSRHTDAIVTENKANAEKFMKGVDSSGVYWNAS 386
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1035 | |||
| d1bxsa_ | 494 | Aldehyde reductase (dehydrogenase), ALDH {Sheep (O | 100.0 | |
| d1a4sa_ | 503 | Aldehyde reductase (dehydrogenase), ALDH {Baltic c | 100.0 | |
| d1o04a_ | 494 | Aldehyde reductase (dehydrogenase), ALDH {Human (H | 100.0 | |
| d1wnda_ | 474 | Putative betaine aldehyde dehydrogenase YdcW {Esch | 100.0 | |
| d1uzba_ | 516 | 1-pyrroline-5-carboxylate dehydrogenase {Thermus t | 100.0 | |
| d1ky8a_ | 499 | Non-phosphorylating glyceraldehyde-3-phosphate deh | 100.0 | |
| d1euha_ | 474 | Aldehyde reductase (dehydrogenase), ALDH {Streptoc | 100.0 | |
| d1ad3a_ | 446 | Aldehyde reductase (dehydrogenase), ALDH {Rat (Rat | 100.0 | |
| d1ez0a_ | 504 | Aldehyde reductase (dehydrogenase), ALDH {Vibrio h | 100.0 | |
| d1o20a_ | 414 | Gamma-glutamyl phosphate reductase {Thermotoga mar | 100.0 | |
| d1vlua_ | 436 | Gamma-glutamyl phosphate reductase {Baker's yeast | 100.0 | |
| d1k75a_ | 431 | L-histidinol dehydrogenase HisD {Escherichia coli | 96.71 |
| >d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Sheep (Ovis aries) [TaxId: 9940]
Probab=100.00 E-value=0 Score=773.68 Aligned_cols=471 Identities=30% Similarity=0.420 Sum_probs=442.2
Q ss_pred CCCCCCCCEEECCEEECCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH---HHHCCCHHHHHHHHHHHHH
Q ss_conf 8888743507729773089997499455999973799638999999999999998307---6318999999999999999
Q 001665 196 NIDNNRVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFP---AWKNTPVATRQRIMFKLQE 272 (1035)
Q Consensus 196 ~~~~~~i~~~I~G~~~~~~~~~~~~v~nP~tGe~i~~v~~~s~~di~~av~~Ar~A~~---~W~~~s~~~R~~iL~~la~ 272 (1035)
+....-.++||||+|+.+.++++++++||+||+++++++.++.+|++.|+++|++||+ .|+.++.++|.++|+++++
T Consensus 8 ~~~~~~~~~yI~G~w~~~~s~~~~~v~nP~t~e~i~~v~~a~~~dvd~Av~aA~~Af~a~~~W~~~s~~eR~~iL~kia~ 87 (494)
T d1bxsa_ 8 NLQFKYTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLAD 87 (494)
T ss_dssp SCCCCCCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHH
T ss_pred CCCCCCCCEEECCEECCCCCCCEEEEECCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHH
T ss_conf 97767577779997538999998985579999888998089999999999999998753541322999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCEEEEEECCCCCCH
Q ss_conf 9998599999999999299979999-999998889999999987511831147789975126521660699877888550
Q 001665 273 LIRRDIDKLAMNITVEQGTTLKAAQ-RDVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPD 351 (1035)
Q Consensus 273 ~L~~~~e~La~~l~~etGk~~~ea~-~Ev~~a~~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~ePlGVV~vI~P~N~Pl 351 (1035)
+|++++++|++++++|+||+..++. .|+...+..+++++.......+...+. ..+...+++++|+|||++|+|||||+
T Consensus 88 ~L~~~~eela~l~~~E~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I~PwN~P~ 166 (494)
T d1bxsa_ 88 LIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPM-DGNFFTYTRSEPVGVCGQIIPWNFPL 166 (494)
T ss_dssp HHHHTHHHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEEECC-SSSEEEEEEEEECCEEEEECCSSSHH
T ss_pred HHHHCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECC-CCCCEEEEEECCEEEEEEEECCCCHH
T ss_conf 99868999999998762896054443221345677999863155406645237-89814699975678999990766536
Q ss_pred HCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEECC-HHHHHHHHCCCCCCEEEEECCCHHHHH
Q ss_conf 2048899999861998999089999237999999999909999857896266-355763412998069999216147899
Q 001665 352 MTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGT-NDVINHICDDEDIKAISFVASSTASVQ 430 (1035)
Q Consensus 352 ~~~~~~l~~ALaaGNaVIlKPSe~ap~ta~~L~ell~eAGlP~gvv~vV~g~-~e~~~~L~~h~~vd~V~fTGS~~vG~~ 430 (1035)
.++++++++||++||+||+|||+.+|.++.++++++.++|+|+|++|+|+|+ .+.+..|+.||+|++|.||||..+|+.
T Consensus 167 ~~~~~~i~~ALaaGN~VVlKpse~tp~~a~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~p~v~~i~fTGS~~~g~~ 246 (494)
T d1bxsa_ 167 LMFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKL 246 (494)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHCCCCCEEEECCCHHHHHH
T ss_conf 78888789999749869997898781999999999998297968089996896589999972989588995298899999
Q ss_pred HHHHHHH-CCCCEEECCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCH-HHHHHHHHHHHHCCCC
Q ss_conf 9999982-3981521289965699968999999999999997413899845785089927507-8799999999752014
Q 001665 431 MYARAAA-RGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVN 508 (1035)
Q Consensus 431 I~~~Aa~-~lkpv~lElGGksp~IV~~dADle~Aa~~Iv~s~f~naGQ~C~a~~~ViV~~~~~-~f~e~Lv~~~~~lkvG 508 (1035)
|++.|+. +++|+++|||||||+||++|||++.|++.+++++|+|+||.|+++++++|+++++ +|+++|+++++++++|
T Consensus 247 i~~~aa~~~~~~~~lElGG~np~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~~~d~f~~~l~~~~~~~~~g 326 (494)
T d1bxsa_ 247 IKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLG 326 (494)
T ss_dssp HHHHHHHTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCCBS
T ss_pred HHHHHCCCCCCEEEEECCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHEEEE
T ss_conf 99972204887399976873848987674166768999987853898655410487425424678999998641305530
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCEEECEEEECCCCCCCCCCCCCCCCCEEEE
Q ss_conf 69999988577769899999999999999879817307754446788999425042883499988221112348612699
Q 001665 509 VGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNM 588 (1035)
Q Consensus 509 ~p~d~~~~~Gpli~~~~~eri~~~I~~av~~GAkvl~gG~~~~~~~~~~g~fi~PTIl~~v~~d~~i~~eEiFGPVl~V~ 588 (1035)
++.++++++||++++.+++++.+++++++++|+++++||... ...|+|++||||.++++++.+++||+||||++|+
T Consensus 327 ~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~----~~~g~~~~Ptvl~~~~~~~~~~~~E~FGPvl~v~ 402 (494)
T d1bxsa_ 327 NPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPW----GNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIM 402 (494)
T ss_dssp CTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEE----CSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEE
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCC----CCCCEEECCEEEECCCCCCHHHHCCCCCCEEEEE
T ss_conf 347988857876899999999999999997699798679736----8994058078984799976787465667658999
Q ss_pred ECCCHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHCCCEEEEEECCCCC----CCCCCCCCCCCCCCCCHHHHHHCCEE
Q ss_conf 63999999999981599857999838878899987414315999929867----88789889889786749999840204
Q 001665 589 QADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPVP----SSFSSINESGEFNFCGKSGVQFYTQI 664 (1035)
Q Consensus 589 ~~~d~eEAI~l~N~~~~gLsasIfT~d~~~~~~~a~~l~sG~V~VN~~~~----~PfGG~~~SG~G~~~G~~g~~~ft~~ 664 (1035)
+|+|++|||+++|+++|||+++|||+|.+.+++++.++++|+|+||++.. +||||+|.||+|+++|.+|+++||+.
T Consensus 403 ~~~~~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~~~SG~G~~~g~~~~~~ft~~ 482 (494)
T d1bxsa_ 403 KFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTEV 482 (494)
T ss_dssp EECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCCCCCTTSCBCCSGGGEESCBSHHHHHHTTEEE
T ss_pred EECCHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCE
T ss_conf 97999999999967999986999928999999999859875999828987688998376231617726689999984353
Q ss_pred EEEEEEC
Q ss_conf 0999944
Q 001665 665 KTVAQQW 671 (1035)
Q Consensus 665 k~v~~~~ 671 (1035)
|+|++++
T Consensus 483 k~i~~~~ 489 (494)
T d1bxsa_ 483 KTVTIKI 489 (494)
T ss_dssp EEEEEEC
T ss_pred EEEEEEC
T ss_conf 8999965
|
| >d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Baltic cod (Gadus callarias) [TaxId: 8053]
Probab=100.00 E-value=0 Score=770.45 Aligned_cols=473 Identities=29% Similarity=0.463 Sum_probs=445.0
Q ss_pred CCEEECCEEECCCCCCEE-EEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 350772977308999749-9455999973799638999999999999998307631899999999999999999985999
Q 001665 202 VSNFIGGKFVDLRGSATI-DVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDK 280 (1035)
Q Consensus 202 i~~~I~G~~~~~~~~~~~-~v~nP~tGe~i~~v~~~s~~di~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e~ 280 (1035)
..+||||+|+.+.++.++ +|+||+||+++++++.++.+|+++|+++|++||+.|+.++..+|.++|++++++|++++++
T Consensus 20 ~~n~I~G~~v~~~~g~~~~~V~nP~tge~i~~v~~a~~~dV~~AV~aA~~A~~~W~~~s~~eR~~iL~~~a~~L~~~~ee 99 (503)
T d1a4sa_ 20 DLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYLKWSKMAGIERSRVMLEAARIIRERRDN 99 (503)
T ss_dssp CCEEETTEEECCCTTCCCEEEECTTTCCEEEEECCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred CCEEECCEEECCCCCCEEEEEECCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 77489898947999970540126999988899949999999999999999999984099999999999999999975999
Q ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCEEEEEECCCCCCHHCHHHHHHH
Q ss_conf 99999999299979999999998889999999987511831147789975126521660699877888550204889999
Q 001665 281 LAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSI 360 (1035)
Q Consensus 281 La~~l~~etGk~~~ea~~Ev~~a~~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~ePlGVV~vI~P~N~Pl~~~~~~l~~ 360 (1035)
|+++++.|+||++.+++.|+..+++.+++++.......+..... ..+...+++++|+|||++|+|||||+.+.++++++
T Consensus 100 la~~~~~etGkp~~ea~~ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I~p~NfP~~~~~~~~~~ 178 (503)
T d1a4sa_ 100 IAKLEVINNGKTITEAEYDIDAAWQCIEYYAGLAPTLSGQHIQL-PGGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAP 178 (503)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCCEEEEEC-GGGCEEEEEEEECSEEEEECCSSSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHH
T ss_conf 99999774031010233444555420101234444332223236-99853210133301221156778759999999999
Q ss_pred HHHCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHCCC
Q ss_conf 98619989990899992379999999999099998578962663557634129980699992161478999999982398
Q 001665 361 AVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAARGK 440 (1035)
Q Consensus 361 ALaaGNaVIlKPSe~ap~ta~~L~ell~eAGlP~gvv~vV~g~~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~~Aa~~lk 440 (1035)
||++||+||+|||+.+|.++.++++++.++|+|+|++|+|+|+.+.+..|+.|++|++|.||||+.+|+.|++.++++++
T Consensus 179 ALaaGN~VV~Kps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~e~g~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~~ 258 (503)
T d1a4sa_ 179 ALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQGGAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKTVK 258 (503)
T ss_dssp HHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCSHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHTTTC
T ss_pred HHHCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHCCC
T ss_conf 99759879998898885999999999998395978699914888999999729996889976979999999997641489
Q ss_pred CEEECCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCH-HHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 1521289965699968999999999999997413899845785089927507-879999999975201469999988577
Q 001665 441 RVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDASADVGP 519 (1035)
Q Consensus 441 pv~lElGGksp~IV~~dADle~Aa~~Iv~s~f~naGQ~C~a~~~ViV~~~~~-~f~e~Lv~~~~~lkvG~p~d~~~~~Gp 519 (1035)
|+++|||||||+||++|||++.|++.+++++|.++||.|+++++++|+++++ +|+++|++.++++++|++.+..+++||
T Consensus 259 ~~~lElGG~~p~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~ri~v~~~~~~~~~~~l~~~~~~~~~g~~~~~~~~~gp 338 (503)
T d1a4sa_ 259 HVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLTETRMGG 338 (503)
T ss_dssp EEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCC
T ss_pred CEEEECCCCCCEEECCCCCHHHHHHHHHCCHHCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHEEECCCCCCCCCCCC
T ss_conf 57997787486799898458887455330332038985556740178731022578999975430764454364444451
Q ss_pred CCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCC--CCCCCCCEEECEEEECCCCCCCCCCCCCCCCCEEEEECCCHHHHH
Q ss_conf 769899999999999999879817307754446--788999425042883499988221112348612699639999999
Q 001665 520 VVSVEVKDQISRLIQNAVDNGASLLLDGRNIVV--PGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAI 597 (1035)
Q Consensus 520 li~~~~~eri~~~I~~av~~GAkvl~gG~~~~~--~~~~~g~fi~PTIl~~v~~d~~i~~eEiFGPVl~V~~~~d~eEAI 597 (1035)
++++.+++++.+++++++++||++++||..... +....|+|++||||.+++++++++++|+||||++|++|++++|||
T Consensus 339 ~i~~~~~~~~~~~~~~a~~~Ga~v~~gg~~~~~~~~~~~~G~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~~eai 418 (503)
T d1a4sa_ 339 LISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVL 418 (503)
T ss_dssp CSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCEEECCEEEECCCCCCHHHHCCCCCCEEEEEECCCHHHHH
T ss_conf 15999999999999999976999997883067788666785277088995799987888554457647999719999999
Q ss_pred HHHHHCCCCCEEEEECCCHHHHHHHHHCCCEEEEEECCCC----CCCCCCCCCCCCCCCCCHHHHHHCCEEEEEEEECCC
Q ss_conf 9998159985799983887889998741431599992986----788789889889786749999840204099994488
Q 001665 598 KMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPV----PSSFSSINESGEFNFCGKSGVQFYTQIKTVAQQWND 673 (1035)
Q Consensus 598 ~l~N~~~~gLsasIfT~d~~~~~~~a~~l~sG~V~VN~~~----~~PfGG~~~SG~G~~~G~~g~~~ft~~k~v~~~~~~ 673 (1035)
+++|+++|||++||||+|...+++++.++++|+|+||++. .+||||+|.||+|+++|.+++++||+.|+|++++.+
T Consensus 419 ~~an~~~~gL~~~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~~~~ 498 (503)
T d1a4sa_ 419 QRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSISPVEVPFGGYKMSGFGRENGQATVDYYSQLKTVIVEMGD 498 (503)
T ss_dssp HHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESCCCCCCTTSCBCCSGGGEECCBSTTGGGGGSEEEEEEEECCSC
T ss_pred HHHHCCCCCCEEEEECCCHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCEEEEEECCCC
T ss_conf 99867999986999918999999999868862799918988888988467041707841289999996080899995777
Q ss_pred CC
Q ss_conf 87
Q 001665 674 LP 675 (1035)
Q Consensus 674 ~~ 675 (1035)
.+
T Consensus 499 ~~ 500 (503)
T d1a4sa_ 499 VD 500 (503)
T ss_dssp CC
T ss_pred CC
T ss_conf 78
|
| >d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Human (Homo sapiens), mitochondrial [TaxId: 9606]
Probab=100.00 E-value=0 Score=769.25 Aligned_cols=469 Identities=30% Similarity=0.405 Sum_probs=441.7
Q ss_pred CCCCCCEEECCEEECCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH---HHHCCCHHHHHHHHHHHHHHH
Q ss_conf 88743507729773089997499455999973799638999999999999998307---631899999999999999999
Q 001665 198 DNNRVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFP---AWKNTPVATRQRIMFKLQELI 274 (1035)
Q Consensus 198 ~~~~i~~~I~G~~~~~~~~~~~~v~nP~tGe~i~~v~~~s~~di~~av~~Ar~A~~---~W~~~s~~~R~~iL~~la~~L 274 (1035)
.....++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+.++.++|.++|+++++.|
T Consensus 10 ~~~~~~~~I~G~w~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~Af~~~~~W~~~~~~eRa~iL~~~a~~l 89 (494)
T d1o04a_ 10 EVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLI 89 (494)
T ss_dssp CCCCCSEEETTEEECCTTCCEEEEEETTTTEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEECCEECCCCCCCEEEEECCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHH
T ss_conf 52347707899863899999897457999987899828999999999999999876366143199999999999999999
Q ss_pred HHHHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCEEEEEECCCCCCHHC
Q ss_conf 98599999999999299979999-99999888999999998751183114778997512652166069987788855020
Q 001665 275 RRDIDKLAMNITVEQGTTLKAAQ-RDVLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMT 353 (1035)
Q Consensus 275 ~~~~e~La~~l~~etGk~~~ea~-~Ev~~a~~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~ePlGVV~vI~P~N~Pl~~ 353 (1035)
++++++|++++++|+||+..++. .|+..++..+++++.......++..+. ..+...+++++|+|||++|+|||||+.+
T Consensus 90 ~~~~eela~~~~~E~GK~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I~P~N~P~~~ 168 (494)
T d1o04a_ 90 ERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPI-DGDFFSYTRHEPVGVCGQIIPWNFPLLM 168 (494)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEEECC-SSSEEEEEEEEECCEEEEECCSSSHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECC-CCCCEEEEEEECCCEEEEECCCCCHHHH
T ss_conf 872999999999985761245456678899998999987788724823236-8983269997234379998886428889
Q ss_pred HHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEECC-HHHHHHHHCCCCCCEEEEECCCHHHHHHH
Q ss_conf 48899999861998999089999237999999999909999857896266-35576341299806999921614789999
Q 001665 354 PLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGT-NDVINHICDDEDIKAISFVASSTASVQMY 432 (1035)
Q Consensus 354 ~~~~l~~ALaaGNaVIlKPSe~ap~ta~~L~ell~eAGlP~gvv~vV~g~-~e~~~~L~~h~~vd~V~fTGS~~vG~~I~ 432 (1035)
+++++++||++||+||+|||+.+|.++.++++++.++|+|+|++|+|+|+ .+.+..|+.|+++++|.||||..+|+.|+
T Consensus 169 ~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~l~~~aglP~gv~~~v~g~~~~~g~~L~~~~~v~~v~fTGS~~~g~~i~ 248 (494)
T d1o04a_ 169 QAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQ 248 (494)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHCCCCCEEEEECCHHHHHHHH
T ss_conf 88899999982992899678778089999999999839492708999689768999996098969899859879999999
Q ss_pred HHHH-HCCCCEEECCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCH-HHHHHHHHHHHHCCCCCC
Q ss_conf 9998-23981521289965699968999999999999997413899845785089927507-879999999975201469
Q 001665 433 ARAA-ARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVG 510 (1035)
Q Consensus 433 ~~Aa-~~lkpv~lElGGksp~IV~~dADle~Aa~~Iv~s~f~naGQ~C~a~~~ViV~~~~~-~f~e~Lv~~~~~lkvG~p 510 (1035)
++|+ ++++|+++|||||||+||++|||++.|++.+++++|+++||.|+++++++|+++++ +|++.|+++++.+++|+|
T Consensus 249 ~~aa~~~~~~~~lElGG~~p~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~p 328 (494)
T d1o04a_ 249 VAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNP 328 (494)
T ss_dssp HHHHHTTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBCCT
T ss_pred HHHHCCCCCEEEEECCCCCCEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEECCC
T ss_conf 97203698749997787583898467568888776665411457633423654443201567777899998642442686
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCEEECEEEECCCCCCCCCCCCCCCCCEEEEEC
Q ss_conf 99998857776989999999999999987981730775444678899942504288349998822111234861269963
Q 001665 511 TDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQA 590 (1035)
Q Consensus 511 ~d~~~~~Gpli~~~~~eri~~~I~~av~~GAkvl~gG~~~~~~~~~~g~fi~PTIl~~v~~d~~i~~eEiFGPVl~V~~~ 590 (1035)
.++++++||++++.+++++.+++++++++|+++++||... .+.|+|++||||.++++++++++||+||||++|++|
T Consensus 329 ~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~----~~~g~~~~Ptvl~~~~~~~~~~~eE~FGPvl~v~~~ 404 (494)
T d1o04a_ 329 FDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIA----ADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKF 404 (494)
T ss_dssp TSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBC----CSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEE
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCC----CCCCCEECCEEEECCCCCCHHHHCCCCCCEEEEEEE
T ss_conf 6666865777899999999999999998799999789827----899744728798379998778856666765899996
Q ss_pred CCHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHCCCEEEEEECCCC----CCCCCCCCCCCCCCCCCHHHHHHCCEEEE
Q ss_conf 99999999998159985799983887889998741431599992986----78878988988978674999984020409
Q 001665 591 DSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPV----PSSFSSINESGEFNFCGKSGVQFYTQIKT 666 (1035)
Q Consensus 591 ~d~eEAI~l~N~~~~gLsasIfT~d~~~~~~~a~~l~sG~V~VN~~~----~~PfGG~~~SG~G~~~G~~g~~~ft~~k~ 666 (1035)
+|++|||+++|+++|||+++|||+|.+.++++++++++|+|+||++. .+||||+|.||+|+++|.+++++||+.|+
T Consensus 405 ~~~~eai~~an~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~~~SG~G~~~g~~~~~~ft~~k~ 484 (494)
T d1o04a_ 405 KTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKT 484 (494)
T ss_dssp CCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCSSCCCTTSCBCCSGGGEESCBSTGGGGGGGEEEEE
T ss_pred CCHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEE
T ss_conf 99999999996799998699990899999999986885499981899878999947745261770158999998447279
Q ss_pred EEEEC
Q ss_conf 99944
Q 001665 667 VAQQW 671 (1035)
Q Consensus 667 v~~~~ 671 (1035)
|+++|
T Consensus 485 v~~~~ 489 (494)
T d1o04a_ 485 VTVKV 489 (494)
T ss_dssp EEEEC
T ss_pred EEEEC
T ss_conf 99967
|
| >d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Putative betaine aldehyde dehydrogenase YdcW species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=750.66 Aligned_cols=467 Identities=25% Similarity=0.362 Sum_probs=429.7
Q ss_pred CCCCEEECCEEECCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 74350772977308999749945599997379963899999999999999830763189999999999999999998599
Q 001665 200 NRVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDID 279 (1035)
Q Consensus 200 ~~i~~~I~G~~~~~~~~~~~~v~nP~tGe~i~~v~~~s~~di~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e 279 (1035)
+..++||||+|+.+ +++.++|+||+||+++++++.++.+|+++|+++|++||+.|+.++.++|.++|++++++|+++++
T Consensus 1 m~~~l~I~G~~v~~-~g~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~ 79 (474)
T d1wnda_ 1 MQHKLLINGELVSG-EGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPKVRAECLLKLADVIEENGQ 79 (474)
T ss_dssp CCCCEEETTEEECC-CSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred CCCCCEECCEEECC-CCCEEEEECCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCHH
T ss_conf 99764789857089-89856647899999879995999999999999999999988219999999999999999986899
Q ss_pred HHHHHHHHHHCCCHHHHHHH-HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCEEEEEECCCCCCHHCHHHHH
Q ss_conf 99999999929997999999-99988899999999875118311477899751265216606998778885502048899
Q 001665 280 KLAMNITVEQGTTLKAAQRD-VLFGLEVVEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMF 358 (1035)
Q Consensus 280 ~La~~l~~etGk~~~ea~~E-v~~a~~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~ePlGVV~vI~P~N~Pl~~~~~~l 358 (1035)
+|+++++.|+||++.++..+ +..+...+.+++...........+....+...+++++|+|||++|+|||||+.+.++++
T Consensus 80 ela~~~~~e~Gk~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~ 159 (474)
T d1wnda_ 80 VFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKL 159 (474)
T ss_dssp HHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCHHHHHHHCCH
T ss_conf 99999999739985676411223332223222233332222121123678634999833541478852040766644108
Q ss_pred HHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEECC-HHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHH
Q ss_conf 999861998999089999237999999999909999857896266-3557634129980699992161478999999982
Q 001665 359 SIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGT-NDVINHICDDEDIKAISFVASSTASVQMYARAAA 437 (1035)
Q Consensus 359 ~~ALaaGNaVIlKPSe~ap~ta~~L~ell~eAGlP~gvv~vV~g~-~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~~Aa~ 437 (1035)
++||++||+||+|||+.+|.++.+++++++++ +|+|++|+|+|. .+.++.|+.||+|++|.||||+.+|+.|++.+++
T Consensus 160 a~ALaaGN~Vv~Kps~~~p~~~~~~~~l~~~~-lP~gv~~~v~g~~~~~g~~L~~~p~i~~v~fTGS~~~G~~i~~~a~~ 238 (474)
T d1wnda_ 160 APALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTAS 238 (474)
T ss_dssp HHHHHTTCEEEEECCTTCCHHHHHHHHHHTTT-SCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHHHHHHGG
T ss_pred HHHHHHCCCEEEECCCCCCHHHHHHHHHHHHH-CCCCCEEEEECCCHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHC
T ss_conf 99997199789957875868999999999974-89880899867948999999719896889916988999999986552
Q ss_pred CCCCEEECCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCH-HHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 3981521289965699968999999999999997413899845785089927507-879999999975201469999988
Q 001665 438 RGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDASAD 516 (1035)
Q Consensus 438 ~lkpv~lElGGksp~IV~~dADle~Aa~~Iv~s~f~naGQ~C~a~~~ViV~~~~~-~f~e~Lv~~~~~lkvG~p~d~~~~ 516 (1035)
+++|+++|||||||+||++|||++.|++.+++++|+|+||.|+++++++|+++++ +|+++|++.++++++|++.+++++
T Consensus 239 ~~k~~~lElgG~~p~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~~~~~l~~~~~~l~~G~~~~~~~~ 318 (474)
T d1wnda_ 239 SIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTE 318 (474)
T ss_dssp GTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCTTSTTCC
T ss_pred CCCEEEEECCCCCCEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCE
T ss_conf 78759997588781698176466433345543114578865423233434444000111245788985026876787760
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCEEECEEEECCCCCCCCCCCCCCCCCEEEEECCCHHHH
Q ss_conf 57776989999999999999987981730775444678899942504288349998822111234861269963999999
Q 001665 517 VGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEA 596 (1035)
Q Consensus 517 ~Gpli~~~~~eri~~~I~~av~~GAkvl~gG~~~~~~~~~~g~fi~PTIl~~v~~d~~i~~eEiFGPVl~V~~~~d~eEA 596 (1035)
+||+++..+++++.+++++++..|+..+.+|... ....|+|++|||+.++.+++++++||+||||++|++|+|+|||
T Consensus 319 ~Gpli~~~~~~~~~~~i~~a~~~ga~~v~~G~~~---~~~~g~~~~Ptil~~~~~~~~~~~eE~FGPVl~v~~~~~~dea 395 (474)
T d1wnda_ 319 LGPLSSLAHLERVGKAVEEAKATGHIKVITGGEK---RKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQV 395 (474)
T ss_dssp BCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSB---CSSSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHH
T ss_pred ECCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCC---CCCCCEEEEEEEEECCCCCCCCEEECCCCCEEEEEEECCHHHH
T ss_conf 3444112222007899999997799099747854---6889518820575224566660043155776999995999999
Q ss_pred HHHHHHCCCCCEEEEECCCHHHHHHHHHCCCEEEEEECCCCC----CCCCCCCCCCCCCCCCHHHHHHCCEEEEEEEEC
Q ss_conf 999981599857999838878899987414315999929867----887898898897867499998402040999944
Q 001665 597 IKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPVP----SSFSSINESGEFNFCGKSGVQFYTQIKTVAQQW 671 (1035)
Q Consensus 597 I~l~N~~~~gLsasIfT~d~~~~~~~a~~l~sG~V~VN~~~~----~PfGG~~~SG~G~~~G~~g~~~ft~~k~v~~~~ 671 (1035)
|+++|+++|||+++|||+|..++++++.++++|+|+||++.. +||||+|.||+|+++|.+|+++||+.|+|++++
T Consensus 396 i~~an~~~~GL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~gl~~~t~~k~v~i~~ 474 (474)
T d1wnda_ 396 VNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVMVKH 474 (474)
T ss_dssp HHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCCCCCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEEEC
T ss_pred HHHHHCCCCCCEEEEEECCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEEEEC
T ss_conf 9999679999869999089999999998488437999099885688772662406448557799999708778999959
|
| >d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: 1-pyrroline-5-carboxylate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=0 Score=744.14 Aligned_cols=465 Identities=26% Similarity=0.411 Sum_probs=430.9
Q ss_pred CCCCCEEECCEEECCCCCCEEEEECCC-CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 874350772977308999749945599-9973799638999999999999998307631899999999999999999985
Q 001665 199 NNRVSNFIGGKFVDLRGSATIDVINPA-TQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRD 277 (1035)
Q Consensus 199 ~~~i~~~I~G~~~~~~~~~~~~v~nP~-tGe~i~~v~~~s~~di~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~ 277 (1035)
...+++||||+|+.+ ...+.++||. +|+++++++.++.+|+++|+++|++||+.|+.++.++|.++|+++++.|+++
T Consensus 35 ~~~~~l~I~G~~v~s--~~~~~~~nP~~tge~i~~~~~a~~~dv~~Av~aA~~A~~~W~~~s~~~R~~iL~~~a~~l~~~ 112 (516)
T d1uzba_ 35 GRHYPLYIGGEWVDT--KERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFKTWKDWPQEDRSRLLLKAAALMRRR 112 (516)
T ss_dssp TEEECEEETTEEECC--SSEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCEEECCEEECC--CCCEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_conf 988883772878779--998588689999869999739999999999999999999874499999999999999999987
Q ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC-CCCCCCCCEEEECCCEEEEEECCCCCCHHCHHH
Q ss_conf 9999999999929997999999999888999999998751183114-778997512652166069987788855020488
Q 001665 278 IDKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVP-NALCGLDTYCFREPLGVCAGICPFNFPDMTPLW 356 (1035)
Q Consensus 278 ~e~La~~l~~etGk~~~ea~~Ev~~a~~~l~~~~~~~~~~~~~~~~-~~~~g~~~~~~~ePlGVV~vI~P~N~Pl~~~~~ 356 (1035)
+++|+++++.|+||+..+++.|+..++..+++++..+....+.... ....+...+.+++|+|||++|+|||||+.++++
T Consensus 113 ~~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~PwN~Pl~~~~~ 192 (516)
T d1uzba_ 113 KRELEATLVYEVGKNWVEASADVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTG 192 (516)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHGGGCSSCCCCCCCTTEEEEEEEEECCEEEEECCSSSTTHHHHH
T ss_pred HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCC
T ss_conf 99999999998388743330567888888788899877522100022123565406886226752234533333321223
Q ss_pred HHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEECC-HHHHHHHHCCCCCCEEEEECCCHHHHHHHHHH
Q ss_conf 99999861998999089999237999999999909999857896266-35576341299806999921614789999999
Q 001665 357 MFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGT-NDVINHICDDEDIKAISFVASSTASVQMYARA 435 (1035)
Q Consensus 357 ~l~~ALaaGNaVIlKPSe~ap~ta~~L~ell~eAGlP~gvv~vV~g~-~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~~A 435 (1035)
++++||++||+||+|||+.+|.++.++++++.++|+|+|++|+|+|. .+.+..|+.|++|++|.||||..+|+.|++.|
T Consensus 193 ~~~~ALaaGN~Vv~Kps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~hp~v~~I~FTGs~~~G~~i~~~a 272 (516)
T d1uzba_ 193 MIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAA 272 (516)
T ss_dssp HHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHHHHH
T ss_pred CCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHH
T ss_conf 55404331134543232026899999999999809696708873698699999998498957896266116788999987
Q ss_pred H------HCCCCEEECCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCH-HHHHHHHHHHHHCCCC
Q ss_conf 8------23981521289965699968999999999999997413899845785089927507-8799999999752014
Q 001665 436 A------ARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVN 508 (1035)
Q Consensus 436 a------~~lkpv~lElGGksp~IV~~dADle~Aa~~Iv~s~f~naGQ~C~a~~~ViV~~~~~-~f~e~Lv~~~~~lkvG 508 (1035)
+ .+++|+++|||||||+||++|||++.|++.|++++|+|+||.|+++++++|+++++ +|+++++++++++++|
T Consensus 273 a~~~~~~~~~k~v~lElgG~~p~iV~~dAd~~~aa~~i~~~~~~~~GQ~C~a~~ri~v~~~i~d~~~~~~~~~~~~l~~g 352 (516)
T d1uzba_ 273 GRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVG 352 (516)
T ss_dssp TSCCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBS
T ss_pred HHCCCCHHHHHHHEEECCCCCCEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC
T ss_conf 40142022322310003676422554235677777787642100588765346754334554310146799999863158
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCEEECEEEECCCCCCCCCCCCCCCCCEEEE
Q ss_conf 69999988577769899999999999999879817307754446788999425042883499988221112348612699
Q 001665 509 VGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNM 588 (1035)
Q Consensus 509 ~p~d~~~~~Gpli~~~~~eri~~~I~~av~~GAkvl~gG~~~~~~~~~~g~fi~PTIl~~v~~d~~i~~eEiFGPVl~V~ 588 (1035)
|.++++++||+++..+++++.+++++++++|+.+ ++|... +..|+|++||||.++++++++++||+||||++|+
T Consensus 353 -~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v-~~g~~~----~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~ 426 (516)
T d1uzba_ 353 -PAEENPDLGPVVSAEQERKVLSYIEIGKNEGQLV-LGGKRL----EGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVI 426 (516)
T ss_dssp -CGGGCCSBCCCSCHHHHHHHHHHHHHHTTTSEEE-ECCSBC----SSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEE
T ss_pred -CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEE-ECCCCC----CCCCCEECCEEEECCCCCCHHHCCCCCCCEEEEE
T ss_conf -9864576664349999999999999999779999-888867----9998268788995689886111377757469999
Q ss_pred ECCCHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHCCCEEEEEECCCC-----C-CCCCCCCCCCCCCCCC-HHHHHHC
Q ss_conf 6399999999998159985799983887889998741431599992986-----7-8878988988978674-9999840
Q 001665 589 QADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPV-----P-SSFSSINESGEFNFCG-KSGVQFY 661 (1035)
Q Consensus 589 ~~~d~eEAI~l~N~~~~gLsasIfT~d~~~~~~~a~~l~sG~V~VN~~~-----~-~PfGG~~~SG~G~~~G-~~g~~~f 661 (1035)
+|+|++|||+++|+++|||+++|||+|.++++++++++++|+|+||++. . +||||+|.||+|+++| .+++++|
T Consensus 427 ~~~d~eeai~~an~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~G~~~~l~~~ 506 (516)
T d1uzba_ 427 RVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLF 506 (516)
T ss_dssp EESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCSGGGBSCCCBTSHHHHHTT
T ss_pred EECCHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
T ss_conf 94999999999977999987999858899999999868872899838988887489997670526088010217999983
Q ss_pred CEEEEEEEEC
Q ss_conf 2040999944
Q 001665 662 TQIKTVAQQW 671 (1035)
Q Consensus 662 t~~k~v~~~~ 671 (1035)
++.|+|..+|
T Consensus 507 ~~~k~v~~r~ 516 (516)
T d1uzba_ 507 LEMKAVAERF 516 (516)
T ss_dssp EEEEEEEEEC
T ss_pred CCEEEEEECC
T ss_conf 8722679759
|
| >d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN species: Archaeon Thermoproteus tenax [TaxId: 2271]
Probab=100.00 E-value=0 Score=700.40 Aligned_cols=464 Identities=23% Similarity=0.375 Sum_probs=426.3
Q ss_pred CCCCEEECCEEECCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH-HHHCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 743507729773089997499455999973799638999999999999998307-6318999999999999999999859
Q 001665 200 NRVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFP-AWKNTPVATRQRIMFKLQELIRRDI 278 (1035)
Q Consensus 200 ~~i~~~I~G~~~~~~~~~~~~v~nP~tGe~i~~v~~~s~~di~~av~~Ar~A~~-~W~~~s~~~R~~iL~~la~~L~~~~ 278 (1035)
-.+++||||+|+. ++.+++++||+||+++++++.++.+|+++|+++|++|++ .|+.++.++|.++|+++++.|++++
T Consensus 15 ~~~~~~I~G~~~~--sg~~~~v~~P~t~~~i~~v~~a~~~dv~~Av~~A~~a~~~~w~~~~~~~R~~iL~~~a~~l~~~~ 92 (499)
T d1ky8a_ 15 PVYPSYLAGEWGG--SGQEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRWSARDMPGTERLAVLRKAADIIERNL 92 (499)
T ss_dssp EEECEECSSSEEC--CSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHTHHHHHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred CCCCCEECCEECC--CCCEEEEECCCCCCEEEEEECCCHHHHHHHHHHHHHHCHHHHHCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 8778878775879--99938812799878899993899999999999998735302331999999999999999999709
Q ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC----CCCCCCCEEEECCCEEEEEECCCCCCHHCH
Q ss_conf 9999999999299979999999998889999999987511831147----789975126521660699877888550204
Q 001665 279 DKLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEFVPN----ALCGLDTYCFREPLGVCAGICPFNFPDMTP 354 (1035)
Q Consensus 279 e~La~~l~~etGk~~~ea~~Ev~~a~~~l~~~~~~~~~~~~~~~~~----~~~g~~~~~~~ePlGVV~vI~P~N~Pl~~~ 354 (1035)
++|+++++.|+||+..+++.|+..++..+++++...+...+..... ...+...+++++|+|||++|+|||||+.++
T Consensus 93 ~~la~~~~~etGk~~~~a~~Ev~~~i~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~I~p~N~P~~~~ 172 (499)
T d1ky8a_ 93 DVFAEVLVMNAGKPKSAAVGEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDA 172 (499)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHGGGGGGTTTCCEEEESTTSSTTTTEEEEEEEEECSEEEEECCSSSHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHH
T ss_conf 99999999981998899865232021222110244555421000011135555652035530456311346433331244
Q ss_pred HHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHCCCCCCEEEEECCCHHHHHHHHH
Q ss_conf 88999998619989990899992379999999999099998578962663557634129980699992161478999999
Q 001665 355 LWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYAR 434 (1035)
Q Consensus 355 ~~~l~~ALaaGNaVIlKPSe~ap~ta~~L~ell~eAGlP~gvv~vV~g~~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~~ 434 (1035)
++++++||++||+||+|||+.++.++..+++++.++|+|.++++++.+..+.+..|+.|++++.|.||||..+|+.+++.
T Consensus 173 ~~~~~~ALaaGn~Vi~Kps~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~l~~~~~i~~v~ftGs~~~g~~i~~~ 252 (499)
T d1ky8a_ 173 VNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGERVVKV 252 (499)
T ss_dssp HHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCCCGGGGHHHHHCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHCCHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCEEEEEEECCCCCCEEEEEC
T ss_conf 31000332014333223431001234321122112455310110256773789998606625589741233340477513
Q ss_pred HHHCCCCEEECCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCH-HHHHHHHHHHHHCCCCCCCCC
Q ss_conf 9823981521289965699968999999999999997413899845785089927507-879999999975201469999
Q 001665 435 AAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDA 513 (1035)
Q Consensus 435 Aa~~lkpv~lElGGksp~IV~~dADle~Aa~~Iv~s~f~naGQ~C~a~~~ViV~~~~~-~f~e~Lv~~~~~lkvG~p~d~ 513 (1035)
++ .+|+++|+|||||+||++|||++.|++.|++++|+++||.|+++++++|+++++ +|+++|++.++++++|+|.++
T Consensus 253 ~~--~~~~~lElgG~np~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~d~f~~~l~~~~~~l~~G~p~~~ 330 (499)
T d1ky8a_ 253 GG--VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPRDP 330 (499)
T ss_dssp HC--SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTST
T ss_pred CC--CCCEEEECCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 53--0016882588784999688584550125550041157654422001322210599999999999982766797775
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCEEECEEE---ECCCCCCCCCCCCCCCCCEEEEEC
Q ss_conf 98857776989999999999999987981730775444678899942504288---349998822111234861269963
Q 001665 514 SADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTIL---RDVTSNMECYKEEIFGPVLLNMQA 590 (1035)
Q Consensus 514 ~~~~Gpli~~~~~eri~~~I~~av~~GAkvl~gG~~~~~~~~~~g~fi~PTIl---~~v~~d~~i~~eEiFGPVl~V~~~ 590 (1035)
++++||+++..+++++.+++++++.+|++++.+|... ...++.++++ .++.+|+.+++||+||||++|++|
T Consensus 331 ~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~~~~~~------~~~~~~~~~~~~~~~~~~d~~~~~eE~FGPvl~v~~~ 404 (499)
T d1ky8a_ 331 TVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRL------GPTYVQPTLVEAPADRVKDMVLYKREVFAPVASAVEV 404 (499)
T ss_dssp TCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCEE------ETTEECCEEEECCHHHHTTSHHHHSCCCSSEEEEEEE
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCC------CCCCCCCCCCCCCCCCCCCCHHHHCCCCCCEEEEEEC
T ss_conf 5652665048789999999999997499776420233------3221232112223457988702321366866899980
Q ss_pred CCHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHCCCEEEEEECCCC----C-CCCCCCCCCCCCCCCCHHHHHHCCEEE
Q ss_conf 99999999998159985799983887889998741431599992986----7-887898898897867499998402040
Q 001665 591 DSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPV----P-SSFSSINESGEFNFCGKSGVQFYTQIK 665 (1035)
Q Consensus 591 ~d~eEAI~l~N~~~~gLsasIfT~d~~~~~~~a~~l~sG~V~VN~~~----~-~PfGG~~~SG~G~~~G~~g~~~ft~~k 665 (1035)
+|++|||+++|++++||+++|||+|.+++++++.++++|+|+||++. . +||||+|.||+|++||.+|+++|++.|
T Consensus 405 ~~~~eai~~~n~~~~gLt~sv~s~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~~~~~k 484 (499)
T d1ky8a_ 405 KDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYK 484 (499)
T ss_dssp SSHHHHHHHHHTSSEESEEEEECCCHHHHHHHHHHCCSSEEEETSCCCCTTSSSCBCCEETTEESCBSTTTTHHHHEEEE
T ss_pred CCHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCEE
T ss_conf 99999999986799997699993899999999986877399996998888778984543617688777799999960788
Q ss_pred EEEEECCC
Q ss_conf 99994488
Q 001665 666 TVAQQWND 673 (1035)
Q Consensus 666 ~v~~~~~~ 673 (1035)
+|+++|..
T Consensus 485 ~i~~~~~~ 492 (499)
T d1ky8a_ 485 TIVFNYKG 492 (499)
T ss_dssp EEEEECTT
T ss_pred EEEECCCC
T ss_conf 99993798
|
| >d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Streptococcus mutans [TaxId: 1309]
Probab=100.00 E-value=0 Score=671.89 Aligned_cols=459 Identities=27% Similarity=0.412 Sum_probs=423.5
Q ss_pred CCCCEEECCEEECCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 74350772977308999749945599997379963899999999999999830763189999999999999999998599
Q 001665 200 NRVSNFIGGKFVDLRGSATIDVINPATQEVGSQVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDID 279 (1035)
Q Consensus 200 ~~i~~~I~G~~~~~~~~~~~~v~nP~tGe~i~~v~~~s~~di~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e 279 (1035)
..|++||||+|+.+ +..++++||+||+.+++++.++.+|+++|+++|++||+.|+.++.++|.++|+++++.|+++++
T Consensus 2 k~~~n~I~G~~~~~--~~~~~v~~P~tg~~i~~~~~a~~~dv~~Ai~~A~~A~~~W~~~s~~~R~~iL~~~a~~L~~~~~ 79 (474)
T d1euha_ 2 KQYKNYVNGEWKLS--ENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADILMRDKE 79 (474)
T ss_dssp CBCCEEETTEEECC--SSEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred CCCCCEECCEECCC--CCCEEEECCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 64653666834289--9977976899988889994989999999999999975987309999999999999999997499
Q ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-----CCCCCCCCCCEEEECCCEEEEEECCCCCCHHCH
Q ss_conf 999999999299979999999998889999999987511831-----147789975126521660699877888550204
Q 001665 280 KLAMNITVEQGTTLKAAQRDVLFGLEVVEQACAVATLQIGEF-----VPNALCGLDTYCFREPLGVCAGICPFNFPDMTP 354 (1035)
Q Consensus 280 ~La~~l~~etGk~~~ea~~Ev~~a~~~l~~~~~~~~~~~~~~-----~~~~~~g~~~~~~~ePlGVV~vI~P~N~Pl~~~ 354 (1035)
+|+.+++.|+||+..+++.|+...+..++++........... ......+...+++++|+|||++|+|||||+..+
T Consensus 80 ~la~~~~~e~Gk~~~~a~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~I~p~n~P~~~~ 159 (474)
T d1euha_ 80 KIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLA 159 (474)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEEEECSEEEEECCTTSTTHHH
T ss_pred HHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECEEEEEEECCCCCCCHHH
T ss_conf 99999999768983000133201378899998887653200012211123457850699850356999865634310344
Q ss_pred HHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEECC-HHHHHHHHCCCCCCEEEEECCCHHHHHHHH
Q ss_conf 8899999861998999089999237999999999909999857896266-355763412998069999216147899999
Q 001665 355 LWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGVLNIVHGT-NDVINHICDDEDIKAISFVASSTASVQMYA 433 (1035)
Q Consensus 355 ~~~l~~ALaaGNaVIlKPSe~ap~ta~~L~ell~eAGlP~gvv~vV~g~-~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~ 433 (1035)
++.+++||++||+||+||++.++.++.++++++.++|+|+|++|+|+++ .+.++.|+.|+++++|.||||..+|+.+.+
T Consensus 160 ~~~~~~aL~aGN~vV~Kps~~~~~~~~~l~~~~~eaglP~gv~~~i~g~~~~~~~~L~~~~~v~~v~ftGs~~~~~~i~~ 239 (474)
T d1euha_ 160 GSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGK 239 (474)
T ss_dssp HHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHH
T ss_pred HHHCHHHHHCCCCCEECCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCHHH
T ss_conf 31000033235430211356663899999999998487967499746884899999984988247983376444422444
Q ss_pred HHHHCCCCEEECCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCH-HHHHHHHHHHHHCCCCCCCC
Q ss_conf 99823981521289965699968999999999999997413899845785089927507-87999999997520146999
Q 001665 434 RAAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTD 512 (1035)
Q Consensus 434 ~Aa~~lkpv~lElGGksp~IV~~dADle~Aa~~Iv~s~f~naGQ~C~a~~~ViV~~~~~-~f~e~Lv~~~~~lkvG~p~d 512 (1035)
.++ ++|+++|+||+||+||++|||++.|++.+++++|+++||.|+++++++|+++++ +|++.++++...++.+++.+
T Consensus 240 ~a~--~k~~~~e~gG~~~~iV~~dAdl~~aa~~i~~~~~~~~Gq~C~a~~~i~v~~~~~~~~~~~l~~~~~~~~~~~~~~ 317 (474)
T d1euha_ 240 MAG--MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPED 317 (474)
T ss_dssp HTT--TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBSCGGG
T ss_pred HCC--CCEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 413--656888527744599989986366899999998617897556664102034445566676666653012347522
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCEEECEEEECCCCCCCCCCCCCCCCCEEEEECCC
Q ss_conf 99885777698999999999999998798173077544467889994250428834999882211123486126996399
Q 001665 513 ASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADS 592 (1035)
Q Consensus 513 ~~~~~Gpli~~~~~eri~~~I~~av~~GAkvl~gG~~~~~~~~~~g~fi~PTIl~~v~~d~~i~~eEiFGPVl~V~~~~d 592 (1035)
. ..+++++.....+++...+......++..+..+. ..|+|++|||+.++++++++++||+||||++|++|+|
T Consensus 318 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~ 389 (474)
T d1euha_ 318 D-ADITPLIDTKSADYVEGLINDANDKGATALTEIK-------REGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTS 389 (474)
T ss_dssp T-CSBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCC-------EETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESC
T ss_pred C-CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC-------CCCCCCCCEEEECCCCCCHHHHCCCCCCEEEEEEECC
T ss_conf 2-3446431057898877777764213000124678-------7888768989965898663231136786789999699
Q ss_pred HHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHCCCEEEEEECCCCC-----CCCCCCCCCCCCCCCCHHHHHHCCEEEEE
Q ss_conf 9999999981599857999838878899987414315999929867-----88789889889786749999840204099
Q 001665 593 LEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINVPVP-----SSFSSINESGEFNFCGKSGVQFYTQIKTV 667 (1035)
Q Consensus 593 ~eEAI~l~N~~~~gLsasIfT~d~~~~~~~a~~l~sG~V~VN~~~~-----~PfGG~~~SG~G~~~G~~g~~~ft~~k~v 667 (1035)
+||||+++|+.++||+++|||+|.+++++++.++++|+|+||++.. +||||+|.||+|++||.+|+++||+.|+|
T Consensus 390 ~deai~~~n~~~~glta~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v 469 (474)
T d1euha_ 390 VEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSV 469 (474)
T ss_dssp HHHHHHHHHHSSEESEEEEECSCHHHHHHHHHHSCSSEEEESSCCCCCSTTSCBCCEETTEESCBSHHHHHHHTEEEEEE
T ss_pred HHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEE
T ss_conf 99999999779999869999189999999998587889999799787888988464054715765789999972867899
Q ss_pred EEE
Q ss_conf 994
Q 001665 668 AQQ 670 (1035)
Q Consensus 668 ~~~ 670 (1035)
+..
T Consensus 470 ~~~ 472 (474)
T d1euha_ 470 VFD 472 (474)
T ss_dssp EEE
T ss_pred EEE
T ss_conf 995
|
| >d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=0 Score=643.70 Aligned_cols=419 Identities=23% Similarity=0.295 Sum_probs=379.2
Q ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 999999999830763189999999999999999998599999999999299979999-9999988899999999875118
Q 001665 241 FKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQ-RDVLFGLEVVEQACAVATLQIG 319 (1035)
Q Consensus 241 i~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e~La~~l~~etGk~~~ea~-~Ev~~a~~~l~~~~~~~~~~~~ 319 (1035)
|++||++|++||+.|+..+.++|.++|++++++|++++++|+++++.|+||+..++. .|+..+++.+++++........
T Consensus 2 v~~av~~Ar~Af~~w~~~s~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~GK~~~ea~~~ev~~~i~~~~~~~~~~~~~~~ 81 (446)
T d1ad3a_ 2 ISDTVKRAREAFNSGKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYYEEVAHVLEELDTTIKELPDWAE 81 (446)
T ss_dssp HHHHHHHHHHHHHTTGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 89999999999986288999999999999999999799999999999739987887899999999999999999987655
Q ss_pred -CCC--CCCCCCCCCEEEECCCEEEEEECCCCCCHHCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCC
Q ss_conf -311--47789975126521660699877888550204889999986199899908999923799999999990999985
Q 001665 320 -EFV--PNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAALAMEAGLPDGV 396 (1035)
Q Consensus 320 -~~~--~~~~~g~~~~~~~ePlGVV~vI~P~N~Pl~~~~~~l~~ALaaGNaVIlKPSe~ap~ta~~L~ell~eAGlP~gv 396 (1035)
... .....+...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++.++++++.+. +|+++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~vi~Kps~~~p~~~~~~~~~~~~~-~~~~~ 160 (446)
T d1ad3a_ 82 DEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLTIQPMVGAVAAGNAVILKPSEVSGHMADLLATLIPQY-MDQNL 160 (446)
T ss_dssp CEECCCCSTTTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHH-SCTTT
T ss_pred CCCCCCCCCCCCCCEEEEEECCEEEECCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCEECCCCCCCCCCCCCC-CCCCC
T ss_conf 56436677778862599962652575146655433222466422001135420113310001222232222232-22222
Q ss_pred EEEEECCHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEECCCCCCEEEECCCCCHHHHHHHHHHHHHCCCC
Q ss_conf 78962663557634129980699992161478999999982398152128996569996899999999999999741389
Q 001665 397 LNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMPDASIDATLNALVSAGFGAAG 476 (1035)
Q Consensus 397 v~vV~g~~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~~Aa~~lkpv~lElGGksp~IV~~dADle~Aa~~Iv~s~f~naG 476 (1035)
++++.+.......++. +.+|+|.||||+.+|+.|++.++++++|+++|||||||+||++|||++.|++.|++++|+|+|
T Consensus 161 ~~~~~~~~~~~~~~~~-~~~~~v~fTGs~~~G~~i~~~aa~~~~~~~lElgG~np~iV~~dADl~~Aa~~iv~~~~~~~G 239 (446)
T d1ad3a_ 161 YLVVKGGVPETTELLK-ERFDHIMYTGSTAVGKIVMAAAAKHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKFMNSG 239 (446)
T ss_dssp EEECCCSHHHHHHHTT-SCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCCEEEECSSSCHHHHHHHHHHHHHTTTT
T ss_pred CCCCCCCCHHHHHHCC-CCCCCEEEECCHHHHHHHHHHHHHCCCCEEEECCCCCCEEEECCCCHHHHHHHHHHHHHCCCC
T ss_conf 2234443124566400-236750887858999999999883399579977886747994488617799999998734799
Q ss_pred CCCCCCCEEEEECCCH-HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCC
Q ss_conf 9845785089927507-879999999975201469999988577769899999999999999879817307754446788
Q 001665 477 ERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGY 555 (1035)
Q Consensus 477 Q~C~a~~~ViV~~~~~-~f~e~Lv~~~~~lkvG~p~d~~~~~Gpli~~~~~eri~~~I~~av~~GAkvl~gG~~~~~~~~ 555 (1035)
|.|+++++++|+++++ +|+++|++.++.+ +|++.++++++||++++.+++++..++++ ++...|+.. .
T Consensus 240 Q~C~a~~rv~v~~~i~~~f~~~l~~~~~~~-~g~~~~~~~~~gp~i~~~~~~~~~~~~~~-----a~~~~g~~~-----~ 308 (446)
T d1ad3a_ 240 QTCVAPDYILCDPSIQNQIVEKLKKSLKDF-YGEDAKQSRDYGRIINDRHFQRVKGLIDN-----QKVAHGGTW-----D 308 (446)
T ss_dssp CCTTSCCEEEECGGGHHHHHHHHHHHHHHH-HCSCGGGCTTSCCCSCHHHHHHHHHTTTT-----SCEEECCCE-----E
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHEE-ECCCCCCCCCCCCHHHHHHHHHHHCCCCC-----HHCCCCEEE-----C
T ss_conf 834668855332200577787653221046-32211223335623443110111101410-----010253210-----6
Q ss_pred CCCCEEECEEEECCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHCCCEEEEEECC
Q ss_conf 99942504288349998822111234861269963999999999981599857999838878899987414315999929
Q 001665 556 ENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNEIEARLVGINV 635 (1035)
Q Consensus 556 ~~g~fi~PTIl~~v~~d~~i~~eEiFGPVl~V~~~~d~eEAI~l~N~~~~gLsasIfT~d~~~~~~~a~~l~sG~V~VN~ 635 (1035)
..+.|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.+++++.++++|+|+||+
T Consensus 309 ~~~~~~~Ptil~~v~~~~~~~~eE~FgPVl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~a~~~~~~l~~G~v~iN~ 388 (446)
T d1ad3a_ 309 QSSRYIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRSLEEAIQFINQREKPLALYVFSNNEKVIKKMIAETSSGGVTAND 388 (446)
T ss_dssp TTTTEECCEEECSCCTTSGGGTSCCCSSEECEEECSSHHHHHHHHHTSCCCSEEEEECSCHHHHHHHHTTCCCSEEEESS
T ss_pred CCCCCCCCEEEECCCCCCHHHHCCCCCCCEEEEEECCHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHCCEEEEEEEC
T ss_conf 88877489799778999887718555762578874008999999868999987999858999999999858871899948
Q ss_pred CC------CCCCCCCCCCCCCCCCCHHHHHHCCEEEEEEEECC
Q ss_conf 86------78878988988978674999984020409999448
Q 001665 636 PV------PSSFSSINESGEFNFCGKSGVQFYTQIKTVAQQWN 672 (1035)
Q Consensus 636 ~~------~~PfGG~~~SG~G~~~G~~g~~~ft~~k~v~~~~~ 672 (1035)
.. .+||||+|.||+|+++|.+|+++||+.|+|++++.
T Consensus 389 ~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~ft~~k~v~~~~~ 431 (446)
T d1ad3a_ 389 VIVHITVPTLPFGGVGNSGMGAYHGKKSFETFSHRRSCLVKSL 431 (446)
T ss_dssp SSGGGGCTTSCCCCCGGGEECCCSTHHHHHHTEEEEEEEECCC
T ss_pred CCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHCEEEEEECCC
T ss_conf 7438877899702266361265428999999720369999247
|
| >d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Vibrio harveyi [TaxId: 669]
Probab=100.00 E-value=0 Score=601.70 Aligned_cols=433 Identities=16% Similarity=0.194 Sum_probs=365.0
Q ss_pred CCEEEEECCCCCCEEE-EECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
Q ss_conf 9749945599997379-963899999999999999830763189999999999999999998599999999999299979
Q 001665 216 SATIDVINPATQEVGS-QVPLTTYEEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLK 294 (1035)
Q Consensus 216 ~~~~~v~nP~tGe~i~-~v~~~s~~di~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e~La~~l~~etGk~~~ 294 (1035)
+.+|+++||+|||.|+ .++.++.+|+++|+++|++||+.|+.++.++|.++|++++++|++++++|+++++.|+||+..
T Consensus 2 ~~~f~~~nP~tge~l~~~~~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gkp~~ 81 (504)
T d1ez0a_ 2 DNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASELEARSDDIIARAHLETALPEV 81 (504)
T ss_dssp CCEEEEECTTTSSEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHH
T ss_pred CCEEEEECCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
T ss_conf 98699888999898120006999999999999999999998339999999999999999997899999999998098889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCC--------CCCCCCCCEEEECCCEEEEEECCCCCCHHCH--HHHHHHHHHC
Q ss_conf 99999999888999999998751183114--------7789975126521660699877888550204--8899999861
Q 001665 295 AAQRDVLFGLEVVEQACAVATLQIGEFVP--------NALCGLDTYCFREPLGVCAGICPFNFPDMTP--LWMFSIAVTC 364 (1035)
Q Consensus 295 ea~~Ev~~a~~~l~~~~~~~~~~~~~~~~--------~~~~g~~~~~~~ePlGVV~vI~P~N~Pl~~~--~~~l~~ALaa 364 (1035)
+++.|+..++..+++++............ ....+...+..++|+|||++|+|||||+.+. .+++++||++
T Consensus 82 ~a~~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~PwNfPl~~~~~~~~~a~ALaa 161 (504)
T d1ez0a_ 82 RLTGEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAA 161 (504)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHH
T ss_conf 99999999999999999987630322220002465446676642368994275588883143321111136779999997
Q ss_pred CCEEEEECCCCCHHHHHHHHHH----HHHHCCCCCCEEEEECC-HHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHCC
Q ss_conf 9989990899992379999999----99909999857896266-355763412998069999216147899999998239
Q 001665 365 GNTFILKPSEKNPGTSMILAAL----AMEAGLPDGVLNIVHGT-NDVINHICDDEDIKAISFVASSTASVQMYARAAARG 439 (1035)
Q Consensus 365 GNaVIlKPSe~ap~ta~~L~el----l~eAGlP~gvv~vV~g~-~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~~Aa~~l 439 (1035)
||+||+|||+.+|.++.++.++ +.++|+|+|++|+|+|+ .+.++.|+.|++|++|+||||+.+|+.|.+.+++++
T Consensus 162 GN~VVlKPs~~tp~ta~~~~~li~~a~~~aGlP~Gv~~~v~g~~~~~g~~L~~~p~v~~V~FTGS~~~g~~i~~~aa~~~ 241 (504)
T d1ez0a_ 162 GCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHERP 241 (504)
T ss_dssp TCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSS
T ss_pred HCCCEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCC
T ss_conf 40320047632122014555678877653121367200046665333432012322102221252178888876300015
Q ss_pred CCEE--ECCCCCCEEEECCCCCHHHHH--HHHHHHHHCCCCCCCCCCCEEEEECCCH--HHHHHHHHHHHHCCCCCCCCC
Q ss_conf 8152--128996569996899999999--9999997413899845785089927507--879999999975201469999
Q 001665 440 KRVQ--SNRGGKNYAIIMPDASIDATL--NALVSAGFGAAGERCTALSTAVFVGSSV--QWEDELVELAKALKVNVGTDA 513 (1035)
Q Consensus 440 kpv~--lElGGksp~IV~~dADle~Aa--~~Iv~s~f~naGQ~C~a~~~ViV~~~~~--~f~e~Lv~~~~~lkvG~p~d~ 513 (1035)
+|+. +|||||||+||++|||++.|+ ..+++++|+|+||.|+++++++|+++.+ .|++.+.+.++.. ++
T Consensus 242 ~~~~l~~ElGGknp~iV~~dAd~~~Aa~~~~~~~~~~~~~GQ~C~a~~rv~v~~~~~~~~~~~~~~~~~~~~------~~ 315 (504)
T d1ez0a_ 242 EPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQ------SP 315 (504)
T ss_dssp SCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHHC------CC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC------CC
T ss_conf 653211245554433343321378876642012212100574121565432123456777766656654320------23
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCEEECEEEE---CCCCCCCCCCCCCCCCCEEEEEC
Q ss_conf 988577769899999999999999879817307754446788999425042883---49998822111234861269963
Q 001665 514 SADVGPVVSVEVKDQISRLIQNAVDNGASLLLDGRNIVVPGYENGNFVGPTILR---DVTSNMECYKEEIFGPVLLNMQA 590 (1035)
Q Consensus 514 ~~~~Gpli~~~~~eri~~~I~~av~~GAkvl~gG~~~~~~~~~~g~fi~PTIl~---~v~~d~~i~~eEiFGPVl~V~~~ 590 (1035)
++.+||+++..+++++ ++.+...|++++.++.. +.+..|.++. ++..++++++||+||||++|++|
T Consensus 316 ~~~~gp~i~~~~~~~v---i~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~eE~FGPvl~i~~~ 384 (504)
T d1ez0a_ 316 STLLTPGIRDSYQSQV---VSRGSDDGIDVTFSQAE--------SPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVC 384 (504)
T ss_dssp BCCSSHHHHHHHHHHH---HHHHTSTTEEEEECCCC--------TTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEEEEEE
T ss_pred CCCCCCCHHHHHHHHH---HHHHHHHHHHCCCCCCC--------CCCCCCCCCCCCCCCCCCCHHHCCCCCCCEEEEEEC
T ss_conf 3334663054443344---23456665310011234--------665577655555555555322205665775530543
Q ss_pred CCHHHHHHHHHHCCCCCEEEEECCCH--HHHHHHHHCCC--EEEEEECCCC------C-----CCCCCCCCCCCCCCCCH
Q ss_conf 99999999998159985799983887--88999874143--1599992986------7-----88789889889786749
Q 001665 591 DSLEEAIKMVNRNRFVNGASIFTSSG--LAARKFQNEIE--ARLVGINVPV------P-----SSFSSINESGEFNFCGK 655 (1035)
Q Consensus 591 ~d~eEAI~l~N~~~~gLsasIfT~d~--~~~~~~a~~l~--sG~V~VN~~~------~-----~PfGG~~~SG~G~~~G~ 655 (1035)
+|++|||+++|+++|||+++|||+|. ..+.+++.+++ +|+|+||+.. . .||||.+.||.|+ +|.
T Consensus 385 ~~~~eai~~an~~~~gL~a~I~t~d~d~~~a~~~~~~l~~~aG~v~iN~~~tG~~v~~~~~~ggpf~g~~~sg~~~-~G~ 463 (504)
T d1ez0a_ 385 ENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSASTS-VGA 463 (504)
T ss_dssp SSHHHHHHHHHTCCCEEEEEEECCGGGHHHHHHHHHHHHTTEEEEEESSCSSCCCCSSSCCCCCSTTSCSCSSCCS-SSG
T ss_pred CCHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEECCCCCCCEECCCCCCCCCCCCCCCCCCCC-CHH
T ss_conf 9999999999779999569999445549999999999867742899968766656357677898988857999875-229
Q ss_pred HHHHHCCEEEE
Q ss_conf 99984020409
Q 001665 656 SGVQFYTQIKT 666 (1035)
Q Consensus 656 ~g~~~ft~~k~ 666 (1035)
.+++.|++...
T Consensus 464 ~~i~~f~r~v~ 474 (504)
T d1ez0a_ 464 EAIHRWLRPVA 474 (504)
T ss_dssp GGGGGGEEEEE
T ss_pred HHHHHHHCHHH
T ss_conf 99999735564
|
| >d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=0 Score=480.28 Aligned_cols=381 Identities=13% Similarity=0.125 Sum_probs=301.5
Q ss_pred HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH------------HHHHHHH
Q ss_conf 9999999999983076318999999999999999999859999999999929997999999------------9998889
Q 001665 239 EEFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNITVEQGTTLKAAQRD------------VLFGLEV 306 (1035)
Q Consensus 239 ~di~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e~La~~l~~etGk~~~ea~~E------------v~~a~~~ 306 (1035)
+|+.+++++|++||+.|+.++.++|.++|++++++|++++++|++++++|+||+..++..| +..++..
T Consensus 1 ee~~~a~~~A~~Af~~w~~~s~~eR~~iL~k~a~~l~~~~~eia~~~~~e~gk~~~~~~~e~~~~rl~~~~~~i~~~~~~ 80 (414)
T d1o20a_ 1 DELLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDEMIKA 80 (414)
T ss_dssp CHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHH
T ss_conf 97999999999999998629999999999999999997699999999999865886041177787874249999999999
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCEEEEEECCCCCCHHCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHH
Q ss_conf 99999998751183114778997512652166069987788855020488999998619989990899992379999999
Q 001665 307 VEQACAVATLQIGEFVPNALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILAAL 386 (1035)
Q Consensus 307 l~~~~~~~~~~~~~~~~~~~~g~~~~~~~ePlGVV~vI~P~N~Pl~~~~~~l~~ALaaGNaVIlKPSe~ap~ta~~L~el 386 (1035)
+++++.......+...... .......+++|+||++++.|||||+.++++++++||++||+||+|||+.+|.++.+++++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~gv~~~~~p~n~p~~~~~~~~~~alaaGN~vvlKps~~tp~~~~~~~~l 159 (414)
T d1o20a_ 81 CETVIGLKDPVGEVIDSWV-REDGLRIARVRVPIGPIGIIYESRPNVTVETTILALKSGNTILLRGGSDALNSNKAIVSA 159 (414)
T ss_dssp HHHHHHSCCCTTCEEEEEE-CTTSCEEEEEEEECCCEEEECCSCTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCCCC-CCCCCCEEECCCCCCCCCCCCCCCHHHHHHCCCHHEECCCCHHCCCCCCCCCCCCHHHHH
T ss_conf 9999986551123344334-433210121122123201231571777651410100136520104560001100203467
Q ss_pred HHHHCCCC----CCEEEEECC-HHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEECCCCCC-EEEECCCCCH
Q ss_conf 99909999----857896266-35576341299806999921614789999999823981521289965-6999689999
Q 001665 387 AMEAGLPD----GVLNIVHGT-NDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKN-YAIIMPDASI 460 (1035)
Q Consensus 387 l~eAGlP~----gvv~vV~g~-~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~~Aa~~lkpv~lElGGks-p~IV~~dADl 460 (1035)
+.+++.|. ++++.+.+. .+....++.++ .+.|+|+..+|..+.+.++++++++.+|+||+| ++||++|||+
T Consensus 160 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~v~~~a~~~~~~~~le~gGgn~~viv~~dAd~ 236 (414)
T d1o20a_ 160 IREALKETEIPESSVEFIENTDRSLVLEMIRLR---EYLSLVIPRGGYGLISFVRDNATVPVLETGVGNCHIFVDESADL 236 (414)
T ss_dssp HHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCT---TTCSEEEECSCHHHHHHHHHHCSSCBCCCCCCCEEEEECTTSCH
T ss_pred HHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCC---CCCEEEECCCHHHHHHHHHHCCCCCEECCCCCCCCEECCCCCCH
T ss_conf 776543212432124555543103444123334---35869974607999987654034402104698787105333543
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCEEEEECCCH-HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC
Q ss_conf 99999999997413899845785089927507-87999999997520146999998857776989999999999999987
Q 001665 461 DATLNALVSAGFGAAGERCTALSTAVFVGSSV-QWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDN 539 (1035)
Q Consensus 461 e~Aa~~Iv~s~f~naGQ~C~a~~~ViV~~~~~-~f~e~Lv~~~~~lkvG~p~d~~~~~Gpli~~~~~eri~~~I~~av~~ 539 (1035)
+.|++.+++++|.+ ||.|+++++++||++++ +|+++|++...+..++.+.+ +.. .
T Consensus 237 ~~A~~~~~~~~~~~-gq~C~a~~r~~V~~~i~d~f~~~l~~~~~~~~~~~~~~----------~~~--------~----- 292 (414)
T d1o20a_ 237 KKAVPVIINAKTQR-PGTCNAAEKLLVHEKIAKEFLPVIVEELRKHGVEVRGC----------EKT--------R----- 292 (414)
T ss_dssp HHHHHHHHHHHHSC-TTSTTSEEEEEEEHHHHHHHHHHHHHHHHHTTCEEEEC----------HHH--------H-----
T ss_pred HHHHHHHHHHHHCC-CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC----------HHH--------H-----
T ss_conf 44566887544137-86433555220108899999999868999769865554----------655--------4-----
Q ss_pred CCCEEECCCCCCCCCCCCCCEEECEEEECCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCEEEEECCCHHHH
Q ss_conf 98173077544467889994250428834999882211123486126996399999999998159985799983887889
Q 001665 540 GASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAA 619 (1035)
Q Consensus 540 GAkvl~gG~~~~~~~~~~g~fi~PTIl~~v~~d~~i~~eEiFGPVl~V~~~~d~eEAI~l~N~~~~gLsasIfT~d~~~~ 619 (1035)
++.+.+. ......+.+|+||||++|++|+|+||||+++|+++|||+++|||+|.+++
T Consensus 293 --------------------~~~~~~~---~~~~~~~~~E~FgPvl~v~~~~~~dEAI~~aN~~~yGLsa~I~T~d~~~a 349 (414)
T d1o20a_ 293 --------------------EIVPDVV---PATEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNA 349 (414)
T ss_dssp --------------------HHSTTSE---ECCGGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHH
T ss_pred --------------------HHCCCCE---ECCCCCCCCEEEEEEEEEEEECCHHHHHHHHHCCCCCCCEEEEECCHHHH
T ss_conf --------------------2110000---00245677022003799999499999999985589998179995899999
Q ss_pred HHHHHCCCEEEEEECCCCC----CCCCCCCCCCC--CCCC--CHHHHHHCCEEEEEEEE
Q ss_conf 9987414315999929867----88789889889--7867--49999840204099994
Q 001665 620 RKFQNEIEARLVGINVPVP----SSFSSINESGE--FNFC--GKSGVQFYTQIKTVAQQ 670 (1035)
Q Consensus 620 ~~~a~~l~sG~V~VN~~~~----~PfGG~~~SG~--G~~~--G~~g~~~ft~~k~v~~~ 670 (1035)
+++++++++|.|+||.+.. .|||+.|++|+ |+.| |.+|+++|++.|+|+.+
T Consensus 350 ~~~~~~i~~G~V~IN~~~~~~~~~~~g~g~~~G~~~~~~~~~G~~gl~~~t~~K~vv~~ 408 (414)
T d1o20a_ 350 KKFVSEIDAAAVYVNASTRFTDGGQFGFGAEIGISTQRFHARGPVGLRELTTYKFVVLG 408 (414)
T ss_dssp HHHHHHCCSSEEEESSCGGGCSTTTTTCSCCSCEECSSSSCCEECCTGGGEEEEEEEEC
T ss_pred HHHHHHCCEEEEEEECCCCCCCCCCCCCCCCEECCCCCCCCCCHHHHHHHCEEEEEEEC
T ss_conf 99998398149999189868888887997815624998998745679984957799987
|
| >d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=384.26 Aligned_cols=393 Identities=17% Similarity=0.189 Sum_probs=284.8
Q ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHCCCHHHH-HHH------HHHHHHH
Q ss_conf 99999999998307631899999999999999999985999999999------9929997999-999------9998889
Q 001665 240 EFKDAVDAAKRAFPAWKNTPVATRQRIMFKLQELIRRDIDKLAMNIT------VEQGTTLKAA-QRD------VLFGLEV 306 (1035)
Q Consensus 240 di~~av~~Ar~A~~~W~~~s~~~R~~iL~~la~~L~~~~e~La~~l~------~etGk~~~ea-~~E------v~~a~~~ 306 (1035)
.++++++.|++|++.|+.++.++|.++|.++++.|+++.++|+++.. .+.|++.... +.+ +...++.
T Consensus 4 ~~e~~~~~Ak~A~~~l~~~s~~~R~~iL~~~a~~L~~~~~eI~~aN~~Dl~~a~~~g~~~~~idRL~l~~~~ri~~~~~~ 83 (436)
T d1vlua_ 4 SSQQIAKNARKAGNILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVMLQG 83 (436)
T ss_dssp HHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHH
T ss_conf 79999999999999998699999999999999999979999999889999999984995888877726846899999999
Q ss_pred HHHHHHHHHHHCCCCCC--CCCCCCCCEEEECCCEEEEEECCCCCCHHCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHH
Q ss_conf 99999998751183114--7789975126521660699877888550204889999986199899908999923799999
Q 001665 307 VEQACAVATLQIGEFVP--NALCGLDTYCFREPLGVCAGICPFNFPDMTPLWMFSIAVTCGNTFILKPSEKNPGTSMILA 384 (1035)
Q Consensus 307 l~~~~~~~~~~~~~~~~--~~~~g~~~~~~~ePlGVV~vI~P~N~Pl~~~~~~l~~ALaaGNaVIlKPSe~ap~ta~~L~ 384 (1035)
++..+.+. ...+.... ....+...+..+.|+|||++| |+++| ...+...+.||++||+||+||++.++.++..++
T Consensus 84 l~~i~~~~-dpvg~~~~~~~~~~gl~~~~~~~P~GVigiI-~e~~P-~vt~~~~~lalksGNavIlk~~~~a~~s~~~l~ 160 (436)
T d1vlua_ 84 IKDVAELE-DPVGKVKMARELDDGLTLYQVTAPVGVLLVI-FESRP-EVIANITALSIKSGNAAILKGGKESVNTFREMA 160 (436)
T ss_dssp HHHHHHSC-CSSSCEEEEEEEETTEEEEEEEEECCEEEEE-ESSCT-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHHH
T ss_pred HHHHHHCC-CCCEEEEEEEECCCCCEEEEEEEEEEEEECC-CCCCC-HHHHHHHHCCCCCCCCCEECCCCCCCCCHHHHH
T ss_conf 99998365-4350576522236652378864111134214-44552-145666540012477311047842246899999
Q ss_pred HHHH--------HHCCCCCCEEEEECCHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEECCCCCCEEEECC
Q ss_conf 9999--------90999985789626635576341299806999921614789999999823981521289965699968
Q 001665 385 ALAM--------EAGLPDGVLNIVHGTNDVINHICDDEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNYAIIMP 456 (1035)
Q Consensus 385 ell~--------eAGlP~gvv~vV~g~~e~~~~L~~h~~vd~V~fTGS~~vG~~I~~~Aa~~lkpv~lElGGksp~IV~~ 456 (1035)
++++ ++|+|+++++++++..+.+..|+.|+.+|.|+||||...++.+.+. ...|+++++||++|+||++
T Consensus 161 ~~~~~al~~a~~~aGlP~~~i~~v~~~~~v~~~l~~~~~Id~ii~tGg~~lv~~v~~~---~~~pvi~~~~G~~~~~Vd~ 237 (436)
T d1vlua_ 161 KIVNDTIAQFQSETGVPVGSVQLIETRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDT---TKIPVLGHADGICSIYLDE 237 (436)
T ss_dssp HHHHHHHHHHHHHHCCCTTSEEECCCC--CGGGGGCTTTCCEEEEESCHHHHHHHHHT---CCSCBTTBCSCCEEEEECT
T ss_pred HHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHCCCCCCCEEEEECCCCEEEEEECC---CCCEEEEECCCCCCEEECC
T ss_conf 9987766653024579974699841216788875037777559971477425655214---6540798549854121103
Q ss_pred CCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 99999999999999741389984578508992750787999999997520146999998857776989999999999999
Q 001665 457 DASIDATLNALVSAGFGAAGERCTALSTAVFVGSSVQWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNA 536 (1035)
Q Consensus 457 dADle~Aa~~Iv~s~f~naGQ~C~a~~~ViV~~~~~~f~e~Lv~~~~~lkvG~p~d~~~~~Gpli~~~~~eri~~~I~~a 536 (1035)
|||++.|++.++.++|++.|| |++.++++|+++++++.+.+...+.+-. ..+. .++.... ...+.
T Consensus 238 ~ADl~~A~~~i~~ak~~~~g~-C~a~e~llV~e~ia~~~~~~~~~~~~~g--------v~l~--~~~~~~~----~~~~~ 302 (436)
T d1vlua_ 238 DADLIKAKRISLDAKTNYPAG-CNAMETLLINPKFSKWWEVLENLTLEGG--------VTIH--ATKDLKT----AYFDK 302 (436)
T ss_dssp TCCHHHHHHHHHHTTCC-----CCCCEEEEECTTSTTHHHHHHHHHHHHC--------CCBE--ECHHHHH----HHHHH
T ss_pred CCCHHHHHHHHHHHHCCCCCC-CCCCCCEEECHHHHHHHHHHHHHHHHCC--------CEEE--ECHHHHH----HHHHH
T ss_conf 443778999987875047774-4455533312766644056689998689--------2898--2799998----86543
Q ss_pred HHCCCCEEECCCCCCCCCCCCCCEEECEEEECCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCEEEEECCCH
Q ss_conf 98798173077544467889994250428834999882211123486126996399999999998159985799983887
Q 001665 537 VDNGASLLLDGRNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSG 616 (1035)
Q Consensus 537 v~~GAkvl~gG~~~~~~~~~~g~fi~PTIl~~v~~d~~i~~eEiFGPVl~V~~~~d~eEAI~l~N~~~~gLsasIfT~d~ 616 (1035)
....++ ..+....|++......+ +.+|.|+|+|+|++|+++||||+++|..++||+++|||+|.
T Consensus 303 ~~~~~~-------------~~~~~~~~~~~~~~~~d---~~~E~l~pvl~v~~v~~~eEAI~~in~~g~ghta~I~T~d~ 366 (436)
T d1vlua_ 303 LNELGK-------------LTEAIQCKTVDADEEQD---FDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTENK 366 (436)
T ss_dssp HHHHTC-------------CCHHHHTTBC----------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEECSCH
T ss_pred HHHCCC-------------CCCCCCCCCCCCCCCCC---HHHHHHCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEECCH
T ss_conf 310122-------------10012344567775346---66665272304999899999999999748998619997999
Q ss_pred HHHHHHHHCCCEEEEEECCCCC----CCCC-----CCCCCCCCCCCCHHHHHHCCEEEEEEEE
Q ss_conf 8899987414315999929867----8878-----9889889786749999840204099994
Q 001665 617 LAARKFQNEIEARLVGINVPVP----SSFS-----SINESGEFNFCGKSGVQFYTQIKTVAQQ 670 (1035)
Q Consensus 617 ~~~~~~a~~l~sG~V~VN~~~~----~PfG-----G~~~SG~G~~~G~~g~~~ft~~k~v~~~ 670 (1035)
..+++|.+++++|.|+||.+.. .+|| |+. ++-....|..|++.+|..|++..-
T Consensus 367 ~~a~~F~~~vda~~V~vNasTrf~Dg~~~g~g~e~Gis-t~k~h~rGp~gl~~ltt~k~~~~g 428 (436)
T d1vlua_ 367 ANAEKFMKGVDSSGVYWNASTRFADGFRYGFGAEVGIS-TSKIHARGPVGLDGLVSYQYQIRG 428 (436)
T ss_dssp HHHHHHHHHCCCSEEEESSCGGGCC-----------------------CCSGGGEEEEEEEEC
T ss_pred HHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCEEEEE-CCCCCCCCCCCHHHHCEEEEEEEC
T ss_conf 99999998589339998177765778855675446675-487778888676784557899977
|
| >d1k75a_ c.82.1.2 (A:) L-histidinol dehydrogenase HisD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: L-histidinol dehydrogenase HisD domain: L-histidinol dehydrogenase HisD species: Escherichia coli [TaxId: 562]
Probab=96.71 E-value=0.016 Score=32.00 Aligned_cols=325 Identities=14% Similarity=0.107 Sum_probs=171.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CC---H-------HHH--------HHHHHHHHHHHHHHHHHHHHHC-C
Q ss_conf 9999999999999999859999999999929-99---7-------999--------9999998889999999987511-8
Q 001665 260 VATRQRIMFKLQELIRRDIDKLAMNITVEQG-TT---L-------KAA--------QRDVLFGLEVVEQACAVATLQI-G 319 (1035)
Q Consensus 260 ~~~R~~iL~~la~~L~~~~e~La~~l~~etG-k~---~-------~ea--------~~Ev~~a~~~l~~~~~~~~~~~-~ 319 (1035)
.+...+.+..+.+.+..+.|.-....+.... .. + .++ +..+..+.+.++.|. ..+. .
T Consensus 26 ~~~v~~~V~~Ii~~Vr~~GD~AL~~yt~kFD~~~~~~l~Vs~~Ei~~A~~~l~~el~~AI~~A~~rI~~FH---~~Q~~~ 102 (431)
T d1k75a_ 26 SESITRTVNDILDNVKARGDEALREYSAKFDKTTVTALKVSAEEIAAASERLSDELKQAMAVAVKNIETFH---TAQKLP 102 (431)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCCCCSCSBCCHHHHHHHHHHSCHHHHHHHHHHHHHHHHHH---HTTCCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH---HHHCCC
T ss_conf 28899999999999997259999999998579984323059999999986299999999999999999999---860379
Q ss_pred CCCCCCCCCCCCEEEECCCEEEEEECCCC---CCHHCHHHHHHHHHHCCCEE--EEECCCCCHHHHHHHHHHHHHHCCCC
Q ss_conf 31147789975126521660699877888---55020488999998619989--99089999237999999999909999
Q 001665 320 EFVPNALCGLDTYCFREPLGVCAGICPFN---FPDMTPLWMFSIAVTCGNTF--ILKPSEKNPGTSMILAALAMEAGLPD 394 (1035)
Q Consensus 320 ~~~~~~~~g~~~~~~~ePlGVV~vI~P~N---~Pl~~~~~~l~~ALaaGNaV--IlKPSe~ap~ta~~L~ell~eAGlP~ 394 (1035)
.+......|...-..+.|+--|++..|.- ||-. .+..++||..||+.= ++.|....|. .| -....+|..
T Consensus 103 ~~~~e~~~Gv~~g~~~~PI~~VGlYVPGG~A~ypSs-vLM~aiPAkvAGV~~Ivv~tPp~~~~~---~l-~aa~~~Gv~- 176 (431)
T d1k75a_ 103 PVDVETQPGVRCQQVTRPVASVGLYIPGGSAPLFST-VLMLATPASIAGCKKVVLCSPPPIADE---IL-YAAQLCGVQ- 176 (431)
T ss_dssp CEEEEEETTEEEEEEEEECSEEEEECCCSSSCCHHH-HHHHHHHHHHHTCSEEEEEECSSCCHH---HH-HHHHHTTCC-
T ss_pred CCEEECCCCCEEEEEEEEHHHHEEECCCCCCCCHHH-HHHHHHHHHHCCCCCEEEEECCCCCCH---HH-HHHHHCCCC-
T ss_conf 830003677302444444101003315787653688-998878777428871069717877516---77-999972834-
Q ss_pred CCEEEEE-CCHHHHHHHHC----CCCCCEEEEECCCHHHHHHHHHHHHCCCCEEECCCCCCE--EEECCCCCHHHHHHHH
Q ss_conf 8578962-66355763412----998069999216147899999998239815212899656--9996899999999999
Q 001665 395 GVLNIVH-GTNDVINHICD----DEDIKAISFVASSTASVQMYARAAARGKRVQSNRGGKNY--AIIMPDASIDATLNAL 467 (1035)
Q Consensus 395 gvv~vV~-g~~e~~~~L~~----h~~vd~V~fTGS~~vG~~I~~~Aa~~lkpv~lElGGksp--~IV~~dADle~Aa~~I 467 (1035)
.+.. |+.....+|.- -++||.|+=.|+.-|...=..-......--+=-+.|.+= +|.|++||.+.+|.++
T Consensus 177 ---~iy~~GGaqAIAAlAyGT~ti~~VdkI~GPGN~yV~~AK~~v~g~~~~vgID~~aGPSEv~viAD~~a~p~~iAaDl 253 (431)
T d1k75a_ 177 ---DVFNVGGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQRLDGAAIDMPAGPSEVLVIADSGATPDFVASDL 253 (431)
T ss_dssp ---EEEECCHHHHHHHHHHCCSSSCCCSEEECCCSHHHHHHHHHHHHSTTSCEESCCCCCCEEEEEECTTSCHHHHHHHH
T ss_pred ---CEEECCCHHHHHHHHHCCCCCCCCCEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHH
T ss_conf ---06762776887877633675242003416886255526773226677655433457753899826889989999999
Q ss_pred HHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECC
Q ss_conf 99974138998457850899275078799999999752014699999885777698999999999999998798173077
Q 001665 468 VSAGFGAAGERCTALSTAVFVGSSVQWEDELVELAKALKVNVGTDASADVGPVVSVEVKDQISRLIQNAVDNGASLLLDG 547 (1035)
Q Consensus 468 v~s~f~naGQ~C~a~~~ViV~~~~~~f~e~Lv~~~~~lkvG~p~d~~~~~Gpli~~~~~eri~~~I~~av~~GAkvl~gG 547 (1035)
+.-+=.+..-.| +++..+. ++.++..+.+.+.--. + | .. +.+....
T Consensus 254 laQAEH~~~a~~-----ilvt~~~-~l~~~v~~~i~~~l~~--------l-~--r~-------~i~~~s~---------- 299 (431)
T d1k75a_ 254 LSQAEHGPDSQV-----ILLTPAA-DMARRVAEAVERQLAE--------L-P--RA-------ETARQAL---------- 299 (431)
T ss_dssp HHHHTTCTTCEE-----EEEESCH-HHHHHHHHHHHHHHHT--------C-S--SC-------HHHHHHH----------
T ss_pred HHCCCCCCCCEE-----EEEECCH-HHHHHHHHHHHHHHHH--------C-H--HH-------HHHHHHH----------
T ss_conf 852687666516-----9996547-7778999999998533--------3-2--78-------8887643----------
Q ss_pred CCCCCCCCCCCCEEECEEEECCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHC-C
Q ss_conf 544467889994250428834999882211123486126996399999999998159985799983887889998741-4
Q 001665 548 RNIVVPGYENGNFVGPTILRDVTSNMECYKEEIFGPVLLNMQADSLEEAIKMVNRNRFVNGASIFTSSGLAARKFQNE-I 626 (1035)
Q Consensus 548 ~~~~~~~~~~g~fi~PTIl~~v~~d~~i~~eEiFGPVl~V~~~~d~eEAI~l~N~~~~gLsasIfT~d~~~~~~~a~~-l 626 (1035)
+-. .++.+++++||++++|..--- -+.|.++|.. .+... .
T Consensus 300 -------------------------------~~~----~ii~v~~~~ea~~~~N~~APE-HL~l~~~~~~---~~~~~i~ 340 (431)
T d1k75a_ 300 -------------------------------NAS----RLIVTKDLAQCVEISNQYGPE-HLIIQTRNAR---ELVDSIT 340 (431)
T ss_dssp -------------------------------TTC----EEEECSSHHHHHHHHHHHCCS-EEEEESTTHH---HHGGGCC
T ss_pred -------------------------------CCC----EEEEECCHHHHHHHHHHHHHH-HHHHHHCCHH---HHHHHHH
T ss_conf -------------------------------034----479946878889999845578-8999735999---9985503
Q ss_pred CEEEEEECCCCC--------CCCCCCCCCCCCCCCCHHHHHHCCEEEEEEE
Q ss_conf 315999929867--------8878988988978674999984020409999
Q 001665 627 EARLVGINVPVP--------SSFSSINESGEFNFCGKSGVQFYTQIKTVAQ 669 (1035)
Q Consensus 627 ~sG~V~VN~~~~--------~PfGG~~~SG~G~~~G~~g~~~ft~~k~v~~ 669 (1035)
.+|.|++....+ .|-.=.+.+|.+++.+..+...|...-++..
T Consensus 341 nAGsIflG~~sp~a~GDY~aGpnHvLPT~G~Ar~~sgLsv~dF~k~~s~~~ 391 (431)
T d1k75a_ 341 SAGSVFLGDWSPESAGDYASGTNHVLPTYGYTATCSSLGLADFQKRMTVQE 391 (431)
T ss_dssp CCSEEEESTTCCHHHHHHTSSSCCCCCCTTGGGTCCCCCGGGGEEEEEEEE
T ss_pred HCCHHHCCCCCCCHHHCCCCCCCCCCCCCCCEEECCCCCHHHEEEEEEEEE
T ss_conf 316324189985011013667886379997420057997899431214799
|