Query 001669
Match_columns 1034
No_of_seqs 323 out of 2112
Neff 7.8
Searched_HMMs 29240
Date Tue Mar 26 16:36:19 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/001669.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_966-970//hhsearch_pdb/001669hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2y65_A Kinesin, kinesin heavy 1.0 1 1 711.3 28.2 353 2-392 4-359 (365)
2 3b6u_A Kinesin-like protein KI 1.0 1 1 702.5 27.0 347 4-385 16-371 (372)
3 3bfn_A Kinesin-like protein KI 1.0 1 1 693.9 25.9 347 5-392 17-372 (388)
4 2vvg_A Kinesin-2; motor protei 1.0 1 1 691.9 27.6 332 8-380 3-348 (350)
5 2owm_A Nckin3-434, related to 1.0 1 1 691.1 30.7 348 6-382 35-429 (443)
6 3cob_A Kinesin heavy chain-lik 1.0 1 1 690.1 31.5 346 8-396 4-354 (369)
7 1goj_A Kinesin, kinesin heavy 1.0 1 1 689.8 29.4 340 5-382 2-345 (355)
8 1x88_A Kinesin-like protein KI 1.0 1 1 684.8 25.2 337 5-376 4-359 (359)
9 1t5c_A CENP-E protein, centrom 1.0 1 1 681.9 29.7 338 7-380 2-341 (349)
10 4a14_A Kinesin, kinesin-like p 1.0 1 1 680.5 28.0 337 2-365 4-344 (344)
No 1
>2y65_A Kinesin, kinesin heavy chain; motor protein; HET: ADP; 2.20A {Drosophila melanogaster} PDB: 2y5w_A*
Probab=1.00 E-value=1 Score=711.33 Aligned_cols=353 Identities=40% Similarity=0.607 Sum_probs=322.0
Q ss_pred CCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEECC--CCCEEECCCEEEECEEECCCCCCHHHHHHHHHHHHHHHHHC
Q ss_conf 8999998655899970799982000399735998289--87212347014613350999997388898853656888424
Q 001669 2 ETGGGEDCCVKVAVHVRPLIGDERAQGCKDCVAVVPG--KPQVQIGTHSFTFDHVYGSTGSPSSAMFDECIAPLVDGLFQ 79 (1034)
Q Consensus 2 ~~~~~~~~~v~V~vRiRP~~~~E~~~~~~~~~~~~~~--~~~v~~~~~~f~FD~Vf~~~~s~q~~vy~~~v~plv~~~l~ 79 (1034)
+|..+..++|+|+|||||+.+.|...++..++.+.++ ...+.++.+.|+||+||++.++ |.+||+.++.|+|+++|+
T Consensus 4 ~~~~~~~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~~~~~i~~~~~~f~FD~Vf~~~~~-Q~~Vy~~~~~plv~~~l~ 82 (365)
T 2y65_A 4 EREIPAEDSIKVVCRFRPLNDSEEKAGSKFVVKFPNNVEENCISIAGKVYLFDKVFKPNAS-QEKVYNEAAKSIVTDVLA 82 (365)
T ss_dssp ----CCEEECEEEEEECCCCHHHHHTTCCBCEECCSSSTTCEEEETTEEEECSEEECTTCC-HHHHHHHHTHHHHHHHHT
T ss_pred CCCCCCCCCEEEEEECCCCCHHHHCCCCCEEEEECCCCCCCEEEECCEEEECCEEECCCCC-HHHHHHHHHHHHHHHHHC
T ss_conf 5567899995999994969946731599259994799877679989989867469647899-899999863037799867
Q ss_pred CCCEEEEEECCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECHHHHHHCCCCCCCCCCC
Q ss_conf 98516997235899954032679999987650757999999998721147607999841012011662328999999999
Q 001669 80 GYNATVLAYGQTGSGKTYTMGTGFKDGYQTGIIPLVMNVLFSKIETLKDQTEFQLHVSFIEILKEEVRDLLDPPCLNKPD 159 (1034)
Q Consensus 80 G~n~tilayG~tgSGKT~Tl~g~~~~~~~~Glipr~~~~LF~~i~~~~~~~~~~v~vS~~EIy~e~v~DLL~~~~~~~~~ 159 (1034)
|||+||||||||||||||||+|+.++...+|||||++.+||..+........|.|.+||+|||||+|+|||++.
T Consensus 83 G~n~tifAYGqTGSGKTyTm~G~~~~~~~~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~------ 156 (365)
T 2y65_A 83 GYNGTIFAYGQTSSGKTHTMEGVIGDSVKQGIIPRIVNDIFNHIYAMEVNLEFHIKVSYYEIYMDKIRDLLDVS------ 156 (365)
T ss_dssp TCCEEEEEECSTTSSHHHHHTBSTTCTTTBCHHHHHHHHHHHHHHHCCSCEEEEEEEEEEEEETTEEEETTCTT------
T ss_pred CCCEEEEEECCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCEEEECCCCC------
T ss_conf 98248983458999996488668887555773779999999999833689539999999999877212622587------
Q ss_pred CCCCCCCCCCCCCCCCCEEEECCCCCEEECCCEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEE
Q ss_conf 88898886457999981467558993897176489907977899999980012344567888899973689999998541
Q 001669 160 TANGHTGKVTVPGKPPIQIRETSNGVITLAGSTEVSVSSLKEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMR 239 (1034)
Q Consensus 160 ~~~~~~~~~~~~~~~~l~i~e~~~~~~~i~gl~e~~v~s~~e~~~~l~~g~~~R~~~~t~~n~~SSRSH~if~i~i~q~~ 239 (1034)
...+.|++++.++++|.|++++.|.|+++++.+|..|..+|.+++|.+|..|||||+||+|+|.+..
T Consensus 157 -------------~~~l~i~e~~~~~~~v~gl~~~~V~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~ 223 (365)
T 2y65_A 157 -------------KVNLSVHEDKNRVPYVKGATERFVSSPEDVFEVIEEGKSNRHIAVTNMNEHSSRSHSVFLINVKQEN 223 (365)
T ss_dssp -------------CCSBCEEECSSSCEEETTCCCEEECSHHHHHHHHHHHHHHHTTTCSCHHHHHHTSEEEEEEEEEEEE
T ss_pred -------------CCCCEEEECCCCCEEECCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEEE
T ss_conf -------------6772378879998784278899658799999999999864665235688878876399999999970
Q ss_pred CCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 36887679999998887637996796865799854446688303456637997644776899987201456889965567
Q 001669 240 KLSPVSLGDSSPNESMNEEYLCAKLHLVDLAGSERAKRTGSDGLRFKEGVHINRGLLALGNVISALGDDKKRKEGVHVPY 319 (1034)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~skl~fVDLAGsEr~~~~~~~g~r~~E~~~IN~sL~aL~~vi~~L~~~~~~~~~~~ipy 319 (1034)
.. ......|+|+|||||||||+.++++.|.+++|+.+||+||++||+||.+|+++.+ .||||
T Consensus 224 ~~--------------~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~----~hvPy 285 (365)
T 2y65_A 224 LE--------------NQKKLSGKLYLVDLAGSEKVSKTGAEGTVLDEAKNINKSLSALGNVISALADGNK----THIPY 285 (365)
T ss_dssp TT--------------TCCEEEEEEEEEECCCCCC----------------CCHHHHHHHHHHHHHHHCCC----SCCCG
T ss_pred CC--------------CCCEEEEEEEEEECCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC----CCCCC
T ss_conf 58--------------8878689999997999882012189522478998888889999989999852788----87866
Q ss_pred CCCHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH-HHHHHHHHHH
Q ss_conf 886322532203899850278863298766789889899999997301277642568862799-9999999999
Q 001669 320 RDSKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYANRARNIQNKPIVNRDPMSTEM-LKMRQQLEFL 392 (1034)
Q Consensus 320 rdSkLT~lLqdsLggns~t~~I~~vsp~~~~~~eTl~TL~~a~r~r~i~~kP~vn~~~~~~ei-~kLr~qle~L 392 (1034)
||||||+||+|+||||++|+||+||||+..+++||++||+||+||++|+|+|.+|.++...++ .+++++++++
T Consensus 286 RdSkLT~lLqdsLgGnskt~mI~~isP~~~~~~ETl~TL~fA~rak~I~n~~~~n~~~~~~~~~~~~~~e~~~~ 359 (365)
T 2y65_A 286 RDSKLTRILQESLGGNARTTIVICCSPASFNESETKSTLDFGRRAKTVKNVVCVNEELTAEEWKRRYEKEKEKN 359 (365)
T ss_dssp GGCHHHHHTGGGTTSSSEEEEEEEECCBGGGHHHHHHHHHHHHHHTTCEEECCCEEECCSHHHHHC--------
T ss_pred CCCHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHHHHHH
T ss_conf 35788898776138996379999846752788999999999999721567541178899999999999999999
No 2
>3b6u_A Kinesin-like protein KIF3B; structural genomics consortium, motor domain, ADP, SGC, ATP-binding, coiled coil, microtubule, motor protein; HET: ADP; 1.80A {Homo sapiens} PDB: 3b6v_A*
Probab=1.00 E-value=1 Score=702.47 Aligned_cols=347 Identities=45% Similarity=0.676 Sum_probs=314.9
Q ss_pred CCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEECCCCCEEEC---------CCEEEECEEECCCCCCHHHHHHHHHHHHH
Q ss_conf 999986558999707999820003997359982898721234---------70146133509999973888988536568
Q 001669 4 GGGEDCCVKVAVHVRPLIGDERAQGCKDCVAVVPGKPQVQIG---------THSFTFDHVYGSTGSPSSAMFDECIAPLV 74 (1034)
Q Consensus 4 ~~~~~~~v~V~vRiRP~~~~E~~~~~~~~~~~~~~~~~v~~~---------~~~f~FD~Vf~~~~s~q~~vy~~~v~plv 74 (1034)
..+..++|+|+|||||+.+.|...++..|+.+.+....+.+. .+.|+||+||++.++ |++||+.++.|+|
T Consensus 16 ~~~~~~~irV~vRvRP~~~~E~~~~~~~~v~~~~~~~~v~v~~~~~~~~~~~~~F~FD~Vf~~~~~-Q~~Vy~~~~~plv 94 (372)
T 3b6u_A 16 FQGSSESVRVVVRCRPMNGKEKAASYDKVVDVDVKLGQVSVKNPKGTAHEMPKTFTFDAVYDWNAK-QFELYDETFRPLV 94 (372)
T ss_dssp -----CBCEEEEEECCCCHHHHHTTCCBCEEEETTTTEEEECCTTCTTTCCCEEEECSEEECTTCC-HHHHHHHTHHHHH
T ss_pred CCCCCCCEEEEEECCCCCHHHHCCCCCEEEEEECCCCEEEEECCCCCCCCCCEEEECCEEECCCCC-HHHHHHHHHHHHH
T ss_conf 678999839999869899355304996389995899879997788777778438876869688674-1789887877778
Q ss_pred HHHHCCCCEEEEEECCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECHHHHHHCCCCCC
Q ss_conf 88424985169972358999540326799999876507579999999987211476079998410120116623289999
Q 001669 75 DGLFQGYNATVLAYGQTGSGKTYTMGTGFKDGYQTGIIPLVMNVLFSKIETLKDQTEFQLHVSFIEILKEEVRDLLDPPC 154 (1034)
Q Consensus 75 ~~~l~G~n~tilayG~tgSGKT~Tl~g~~~~~~~~Glipr~~~~LF~~i~~~~~~~~~~v~vS~~EIy~e~v~DLL~~~~ 154 (1034)
+++|+|||+||||||||||||||||+|..+++..+|||||++.+||..+.. .....|.|++||+|||||+|+|||++..
T Consensus 95 ~~~l~G~n~tifAYGqTGSGKTyTM~G~~~~~~~~Giipr~~~~lF~~i~~-~~~~~~~v~vS~~EIYnE~i~DLL~~~~ 173 (372)
T 3b6u_A 95 DSVLQGFNGTIFAYGQTGTGKTYTMEGIRGDPEKRGVIPNSFDHIFTHISR-SQNQQYLVRASYLEIYQEEIRDLLSKDQ 173 (372)
T ss_dssp HHHHTTCCEEEEEEESTTSSHHHHHTBCTTSGGGBCHHHHHHHHHHHHHHT-CSSCEEEEEEEEEEEETTEEEETTSSCT
T ss_pred HHHHCCCEEEEEEECCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHH-CCCCCEEEEEEEEEEECCEEEECCCCCC
T ss_conf 998679813588656899999875755899834488188999999998651-4577369999899996788899778977
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEECCCEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEE
Q ss_conf 99999888988864579999814675589938971764899079778999999800123445678888999736899999
Q 001669 155 LNKPDTANGHTGKVTVPGKPPIQIRETSNGVITLAGSTEVSVSSLKEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTIT 234 (1034)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~l~i~e~~~~~~~i~gl~e~~v~s~~e~~~~l~~g~~~R~~~~t~~n~~SSRSH~if~i~ 234 (1034)
...+.|++++.++++|.|++++.|.|++|++.+|..|..+|.+++|.+|..|||||+||+|+
T Consensus 174 ------------------~~~l~i~e~~~~~v~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~If~i~ 235 (372)
T 3b6u_A 174 ------------------TKRLELKERPDTGVYVKDLSSFVTKSVKEIEHVMNVGNQNRSVGATNMNEHSSRSHAIFVIT 235 (372)
T ss_dssp ------------------TCCBCEEEETTTEEEETTCCCEECCSHHHHHHHHHHHHHHHTTTCSSHHHHHHTSEEEEEEE
T ss_pred ------------------CCCCEEEECCCCCEECCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEE
T ss_conf ------------------77736898799967528988999267999999999999766725455778777642999999
Q ss_pred EEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 98541368876799999988876379967968657998544466883034566379976447768999872014568899
Q 001669 235 LEQMRKLSPVSLGDSSPNESMNEEYLCAKLHLVDLAGSERAKRTGSDGLRFKEGVHINRGLLALGNVISALGDDKKRKEG 314 (1034)
Q Consensus 235 i~q~~~~~~~~~~~~~~~~~~~~~~~~skl~fVDLAGsEr~~~~~~~g~r~~E~~~IN~sL~aL~~vi~~L~~~~~~~~~ 314 (1034)
|.+..... +.......|+|+|||||||||..++++.|.|++|+.+||+||++||+||.+|++++.
T Consensus 236 v~~~~~~~-----------~~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~---- 300 (372)
T 3b6u_A 236 IECSEVGL-----------DGENHIRVGKLNLVDLAGSERQAKTGAQGERLKEATKINLSLSALGNVISALVDGKS---- 300 (372)
T ss_dssp EEEEC----------------CCCEEEEEEEEEECCCCCE----------EEEGGGCCHHHHHHHHHHHHHHCC------
T ss_pred EEEEECCC-----------CCCCCEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC----
T ss_conf 99960477-----------887626788999997988765544575154314675650649999999999863898----
Q ss_pred CCCCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
Q ss_conf 65567886322532203899850278863298766789889899999997301277642568862799999
Q 001669 315 VHVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYANRARNIQNKPIVNRDPMSTEMLKM 385 (1034)
Q Consensus 315 ~~ipyrdSkLT~lLqdsLggns~t~~I~~vsp~~~~~~eTl~TL~~a~r~r~i~~kP~vn~~~~~~ei~kL 385 (1034)
.||||||||||+||+|+||||++|+|||||||+..+++||++||+||+||++|+|+|.+|.++....+.+|
T Consensus 301 ~hvPyRdSkLT~lLqdsLgGnskt~mIa~vsP~~~~~~ETlsTLrfA~rak~I~n~~~~n~~~~~~~~~~~ 371 (372)
T 3b6u_A 301 THIPYRDSKLTRLLQDSLGGNAKTVMVANVGPASYNVEETLTTLRYANRAKNIKNKPRVNEDPKDALLREF 371 (372)
T ss_dssp -CCCGGGSHHHHHTTTTTTSSSEEEEEEEECCBGGGHHHHHHHHHHHHHHTTCBCCCCCCC----------
T ss_pred CCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHC
T ss_conf 87866220889999986299954899999688524799999999999998645566625577579999851
No 3
>3bfn_A Kinesin-like protein KIF22; limited proteolysis, structural genomics consortium domain, ADP, SGC, ATP-binding, DNA-binding, microtubule, MO protein; HET: ADP; 2.30A {Homo sapiens}
Probab=1.00 E-value=1 Score=693.86 Aligned_cols=347 Identities=35% Similarity=0.556 Sum_probs=306.3
Q ss_pred CCCCCCEEEEEEECCCCCCCCCCCCCCEEEEECCCCC-EEE-----CCCEEEECEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 9998655899970799982000399735998289872-123-----4701461335099999738889885365688842
Q 001669 5 GGEDCCVKVAVHVRPLIGDERAQGCKDCVAVVPGKPQ-VQI-----GTHSFTFDHVYGSTGSPSSAMFDECIAPLVDGLF 78 (1034)
Q Consensus 5 ~~~~~~v~V~vRiRP~~~~E~~~~~~~~~~~~~~~~~-v~~-----~~~~f~FD~Vf~~~~s~q~~vy~~~v~plv~~~l 78 (1034)
.+..++|+|+|||||+.+.|...++..|+.+..+... +.. ....|+||+||++.++ |++||+.++.|+|+++|
T Consensus 17 ~~~~~~irV~vRvRP~~~~E~~~~~~~~v~~~~~~~~~i~~~~~~~~~~~f~FD~Vf~~~~t-Q~~Vy~~~~~plv~~~l 95 (388)
T 3bfn_A 17 QGPPARVRVAVRLRPFVDGTAGASDPPCVRGMDSCSLEIANWRNHQETLKYQFDAFYGERST-QQDIYAGSVQPILRHLL 95 (388)
T ss_dssp SSCCCCCEEEEEECCCC-----------------------------CEEEEECSEEECTTCC-HHHHHHHHTGGGHHHHT
T ss_pred CCCCCCEEEEEECCCCCHHHHCCCCCCEEEECCCCEEEEECCCCCCCEEEEECCEEECCCCC-HHHHHHHHHHHHHHHHH
T ss_conf 68999979999779899145346998639955998599956888877059872369567897-75778998888888761
Q ss_pred CCCCEEEEEECCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHCC---CCCCEEEEEEEEEECHHHHHHCCCCCCC
Q ss_conf 4985169972358999540326799999876507579999999987211---4760799984101201166232899999
Q 001669 79 QGYNATVLAYGQTGSGKTYTMGTGFKDGYQTGIIPLVMNVLFSKIETLK---DQTEFQLHVSFIEILKEEVRDLLDPPCL 155 (1034)
Q Consensus 79 ~G~n~tilayG~tgSGKT~Tl~g~~~~~~~~Glipr~~~~LF~~i~~~~---~~~~~~v~vS~~EIy~e~v~DLL~~~~~ 155 (1034)
+|||+||||||||||||||||+|+ ...+|||||++.+||..+.... ....|.|.+||+|||||.|+|||++.
T Consensus 96 ~G~N~tifAYGqTGSGKTyTM~G~---~~~~Giipra~~~lF~~i~~~~~~~~~~~~~V~vS~lEIYnE~i~DLL~~~-- 170 (388)
T 3bfn_A 96 EGQNASVLAYGPTGAGKTHTMLGS---PEQPGVIPRALMDLLQLTREEGAEGRPWALSVTMSYLEIYQEKVLDLLDPA-- 170 (388)
T ss_dssp TTCCEEEEEESCTTSSHHHHHTBC---SSSBCHHHHHHHHHHHHHHHHTSTTCSEEEEEEEEEEEEETTEEEESSSCS--
T ss_pred CCCEEEEEEECCCCCCCCEEEECC---CCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCEEEEHHCCC--
T ss_conf 696566761168889997686567---556641689999999999874233777148999999999888645600167--
Q ss_pred CCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEECCCEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEE
Q ss_conf 99998889888645799998146755899389717648990797789999998001234456788889997368999999
Q 001669 156 NKPDTANGHTGKVTVPGKPPIQIRETSNGVITLAGSTEVSVSSLKEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITL 235 (1034)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~l~i~e~~~~~~~i~gl~e~~v~s~~e~~~~l~~g~~~R~~~~t~~n~~SSRSH~if~i~i 235 (1034)
...+.|++++.++++|.|++++.|.|+++++.+|..|..+|.+++|.+|..|||||+||+|+|
T Consensus 171 -----------------~~~l~ired~~~~v~v~gl~~~~V~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~If~i~v 233 (388)
T 3bfn_A 171 -----------------SGDLVIREDCRGNILIPGLSQKPISSFADFERHFLPASRNRTVGATRLNQRSSRSHAVLLVKV 233 (388)
T ss_dssp -----------------SCBCCCEECTTSCEECTTCCCEECCSHHHHHHHHHHHTC-----------CGGGSEEEEEEEE
T ss_pred -----------------CCCCEEEECCCCCEEECCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEE
T ss_conf -----------------888459986999988536059995899999999999750265223647787777739999999
Q ss_pred EEEECCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 85413688767999999888763799679686579985444668830345663799764477689998720145688996
Q 001669 236 EQMRKLSPVSLGDSSPNESMNEEYLCAKLHLVDLAGSERAKRTGSDGLRFKEGVHINRGLLALGNVISALGDDKKRKEGV 315 (1034)
Q Consensus 236 ~q~~~~~~~~~~~~~~~~~~~~~~~~skl~fVDLAGsEr~~~~~~~g~r~~E~~~IN~sL~aL~~vi~~L~~~~~~~~~~ 315 (1034)
.+..... ......|+|+|||||||||..++++.|.|++|+.+||+||++||+||.+|+++..
T Consensus 234 ~~~~~~~-------------~~~~~~skL~lVDLAGSEr~~~t~~~g~rlkE~~~INkSL~aLg~vI~aL~~~~~----- 295 (388)
T 3bfn_A 234 DQRERLA-------------PFRQREGKLYLIDLAGSEDNRRTGNKGLRLKESGAINTSLFVLGKVVDALNQGLP----- 295 (388)
T ss_dssp EEEESST-------------TCCEEEEEEEEEECCCTTC--------------CCCCHHHHHHHHHHHHHHTTCS-----
T ss_pred EEECCCC-------------CCCEEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC-----
T ss_conf 9822688-------------8733688999998987766554567551147776750639999999999966999-----
Q ss_pred CCCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 55678863225322038998502788632987667898898999999973012776425688627999999999999
Q 001669 316 HVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYANRARNIQNKPIVNRDPMSTEMLKMRQQLEFL 392 (1034)
Q Consensus 316 ~ipyrdSkLT~lLqdsLggns~t~~I~~vsp~~~~~~eTl~TL~~a~r~r~i~~kP~vn~~~~~~ei~kLr~qle~L 392 (1034)
||||||||||+||+|+|||||+|+|||||||+..+++||++||+||+||++|+|+|.+|.++....+..++...++|
T Consensus 296 hVPYRdSkLTrlLqdsLgGnskT~mIa~iSP~~~~~~ETlsTLrfA~rak~I~n~p~~n~~~~~~~l~~~k~~~~~l 372 (388)
T 3bfn_A 296 RVPYRDSKLTRLLQDSLGGSAHSILIANIAPERRFYLDTVSALNFAARSKEVINRPFTNESLQPHALGPVKLSQKEL 372 (388)
T ss_dssp CCCGGGSHHHHHTTTSSSTTCEEEEEEEECCSGGGHHHHHHHHHHHCSEEEEC------------------------
T ss_pred CCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 88675658899999860899628999997985000899999999999985175767356789989998878899986
No 4
>2vvg_A Kinesin-2; motor protein, nucleotide-binding, microtubule, ATP-binding; HET: ADP; 1.60A {Giardia intestinalis}
Probab=1.00 E-value=1 Score=691.88 Aligned_cols=332 Identities=42% Similarity=0.664 Sum_probs=304.0
Q ss_pred CCCEEEEEEECCCCCCCCCCCCCCEEEEECCCCCEEEC--------------CCEEEECEEECCCCCCHHHHHHHHHHHH
Q ss_conf 86558999707999820003997359982898721234--------------7014613350999997388898853656
Q 001669 8 DCCVKVAVHVRPLIGDERAQGCKDCVAVVPGKPQVQIG--------------THSFTFDHVYGSTGSPSSAMFDECIAPL 73 (1034)
Q Consensus 8 ~~~v~V~vRiRP~~~~E~~~~~~~~~~~~~~~~~v~~~--------------~~~f~FD~Vf~~~~s~q~~vy~~~v~pl 73 (1034)
.++|+|+|||||+.+.|...++..|+.+.+....|.+. .+.|+||+||++.++ |++||+.++.|+
T Consensus 3 ~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~~~v~v~~~~~~~~~~~~~~~~~~f~FD~Vf~~~~~-Q~~Vy~~~~~pl 81 (350)
T 2vvg_A 3 SDNIKVIVRCRPLNARETRENALNIIRMDEASAQVIVDPPEQEKSATQAKKVPRTFTFDAVYDQTSC-NYGIFQASFKPL 81 (350)
T ss_dssp -CBCEEEEEECCCCHHHHHTTCCBCEEEEGGGTEEEECC--------------EEEECSEEECTTCC-HHHHHHHTTHHH
T ss_pred CCCEEEEEEECCCCHHHHCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCEEEECCEEECCCCC-HHHHHHHHHHHH
T ss_conf 9986999990979913320499538998499988999604554433445778527667889799761-068998789999
Q ss_pred HHHHHCCCCEEEEEECCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECHHHHHHCCCCC
Q ss_conf 88842498516997235899954032679999987650757999999998721147607999841012011662328999
Q 001669 74 VDGLFQGYNATVLAYGQTGSGKTYTMGTGFKDGYQTGIIPLVMNVLFSKIETLKDQTEFQLHVSFIEILKEEVRDLLDPP 153 (1034)
Q Consensus 74 v~~~l~G~n~tilayG~tgSGKT~Tl~g~~~~~~~~Glipr~~~~LF~~i~~~~~~~~~~v~vS~~EIy~e~v~DLL~~~ 153 (1034)
|+++|+|||+||||||||||||||||+|+ ...+|||||++.+||..+........|.|.+||+|||||+|+|||.+
T Consensus 82 v~~~l~G~n~tifAYGqTGSGKTyTm~G~---~~~~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~i~DLL~~- 157 (350)
T 2vvg_A 82 IDAVLEGFNSTIFAYGQTGAGKTWTMGGN---KEEPGAIPNSFKHLFDAINSSSSNQNFLVIGSYLELYNEEIRDLIKN- 157 (350)
T ss_dssp HHHHHTTCCEEEEEECSTTSSHHHHHTBC---SSSBCHHHHHHHHHHHHHHTCCTTEEEEEEEEEEEEETTEEEETTTT-
T ss_pred HHHHHCCCCEEEEEECCCCCCCCEEEECC---CCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCEEEECCCC-
T ss_conf 99985788526886468999998785358---76675588999999999986536875799999999928788885567-
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEECCCEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEE
Q ss_conf 99999988898886457999981467558993897176489907977899999980012344567888899973689999
Q 001669 154 CLNKPDTANGHTGKVTVPGKPPIQIRETSNGVITLAGSTEVSVSSLKEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTI 233 (1034)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~l~i~e~~~~~~~i~gl~e~~v~s~~e~~~~l~~g~~~R~~~~t~~n~~SSRSH~if~i 233 (1034)
...+.|++++.++++|.|++++.|.+++|++.+|..|..+|.+++|.+|..|||||+||+|
T Consensus 158 -------------------~~~l~i~e~~~~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i 218 (350)
T 2vvg_A 158 -------------------NTKLPLKEDKTRGIYVDGLSMHRVTTAAELSALMDKGFANRHVAATQMNDTSSRSHSIFMV 218 (350)
T ss_dssp -------------------EEEECEEEETTTEEEETTCCCEEESSHHHHHHHHHHHHHHC----------CTTCEEEEEE
T ss_pred -------------------CCCCEEEECCCCCEEECCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEE
T ss_conf -------------------7684256748998881587799749999999999999841460014578888765299999
Q ss_pred EEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 99854136887679999998887637996796865799854446688303456637997644776899987201456889
Q 001669 234 TLEQMRKLSPVSLGDSSPNESMNEEYLCAKLHLVDLAGSERAKRTGSDGLRFKEGVHINRGLLALGNVISALGDDKKRKE 313 (1034)
Q Consensus 234 ~i~q~~~~~~~~~~~~~~~~~~~~~~~~skl~fVDLAGsEr~~~~~~~g~r~~E~~~IN~sL~aL~~vi~~L~~~~~~~~ 313 (1034)
+|.+...... ......|+|+|||||||||..++++.|.+++|+.+||+||++||+||.+|++++
T Consensus 219 ~v~~~~~~~~------------~~~~~~skl~lVDLAGSEr~~~t~~~g~rl~E~~~IN~SL~aLg~vI~aL~~~~---- 282 (350)
T 2vvg_A 219 RIECSEVIEN------------KEVIRVGKLNLVDLAGSERQSKTGATGETLVEGAKINLSLSALGLVISKLVEGA---- 282 (350)
T ss_dssp EEEEEEC----------------CEEEEEEEEEEECCCCCC---------------CTTHHHHHHHHHHHHHHHTC----
T ss_pred EEEEEECCCC------------CCCEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC----
T ss_conf 9999504678------------761788999999689887554456507788999887589999999999997389----
Q ss_pred CCCCCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCH
Q ss_conf 9655678863225322038998502788632987667898898999999973012776425688627
Q 001669 314 GVHVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYANRARNIQNKPIVNRDPMST 380 (1034)
Q Consensus 314 ~~~ipyrdSkLT~lLqdsLggns~t~~I~~vsp~~~~~~eTl~TL~~a~r~r~i~~kP~vn~~~~~~ 380 (1034)
.||||||||||+||+|+|||||+|+|||||||+..+++||++||+||+|+++|+|+|.+|.++...
T Consensus 283 -~hvPyRdSkLT~lLqdsLgGnskt~mI~~isP~~~~~~ETl~TL~fA~rak~i~n~~~~n~~~~~~ 348 (350)
T 2vvg_A 283 -THIPYRDSKLTRLLQDSLGGNSKTLMCANISPASTNYDETMSTLRYADRAKQIKNKPRINEDPKDA 348 (350)
T ss_dssp -SSCCGGGCHHHHHTTTTTTSSSEEEEEEEECCBGGGHHHHHHHHHHHHHHTTCBCCCCCCBSCTTC
T ss_pred -CCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEECCCCHHC
T ss_conf -988764558889989860899628999996884001899999999999985445666125782010
No 5
>2owm_A Nckin3-434, related to kinesin-like protein KIF1C; motor domain, ADP, NECK linker, motor PR; HET: ADP; 3.25A {Neurospora crassa}
Probab=1.00 E-value=1 Score=691.09 Aligned_cols=348 Identities=40% Similarity=0.607 Sum_probs=300.0
Q ss_pred CCCCCEEEEEEECCCCCCCCCCCCCCEEEEECCCCCEE--------------------ECCCEEEECEEECCC------C
Q ss_conf 99865589997079998200039973599828987212--------------------347014613350999------9
Q 001669 6 GEDCCVKVAVHVRPLIGDERAQGCKDCVAVVPGKPQVQ--------------------IGTHSFTFDHVYGST------G 59 (1034)
Q Consensus 6 ~~~~~v~V~vRiRP~~~~E~~~~~~~~~~~~~~~~~v~--------------------~~~~~f~FD~Vf~~~------~ 59 (1034)
...++|+|+|||||+.+.|...++..++.+.+....+. ...+.|+||+||++. .
T Consensus 35 ~~~~~vrV~vRvRP~~~~E~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~F~FD~vF~~~~~~~~~~ 114 (443)
T 2owm_A 35 DPGANVRVVVRVRAFLPRELERNAECIVEMDPATERTSLLVPQETDFADARGARSRRVLEEKSFTFDKSFWSHNTEDEHY 114 (443)
T ss_dssp CCCEECEEEEEEECCCHHHHHTTCCCCEEECSSSCEEEECCCC---------------CCCEEEECSEEEEESCTTSTTC
T ss_pred CCCCCEEEEEEECCCCHHHHHCCCCEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEECCEEECCCCCCCCCC
T ss_conf 89989499999399996886269945999758986279955887654333332123366772685273827877677657
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHCC---CCCCEEEEE
Q ss_conf 97388898853656888424985169972358999540326799999876507579999999987211---476079998
Q 001669 60 SPSSAMFDECIAPLVDGLFQGYNATVLAYGQTGSGKTYTMGTGFKDGYQTGIIPLVMNVLFSKIETLK---DQTEFQLHV 136 (1034)
Q Consensus 60 s~q~~vy~~~v~plv~~~l~G~n~tilayG~tgSGKT~Tl~g~~~~~~~~Glipr~~~~LF~~i~~~~---~~~~~~v~v 136 (1034)
++|++||+.++.|+|+++|+|||+||||||||||||||||+|+ ..++|||||++.+||..|.... ....|.|.|
T Consensus 115 asQ~~Vy~~~~~plv~~~l~GyN~tIfAYGQTGSGKTyTM~G~---~~~~GIipr~~~~lF~~i~~~~~~~~~~~~~V~v 191 (443)
T 2owm_A 115 ATQEHVYDSLGEEFLDHNFEGYHTCIFAYGQTGSGKSYTMMGT---PDQPGLIPRTCEDLFQRIASAQDETPNISYNVKV 191 (443)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTCCEEEEEESSTTSSHHHHHTCC---TTSCCHHHHHHHHHHHHHHHTTTTSTTCEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEECC---CCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEE
T ss_conf 8799998763246888863687427998678899998886468---7777537999999999887652136773499999
Q ss_pred EEEEECHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEECCCEEEEECCHHHHHHHHHHCCCCCCCC
Q ss_conf 41012011662328999999999888988864579999814675589938971764899079778999999800123445
Q 001669 137 SFIEILKEEVRDLLDPPCLNKPDTANGHTGKVTVPGKPPIQIRETSNGVITLAGSTEVSVSSLKEMAACLEQGSLSRATG 216 (1034)
Q Consensus 137 S~~EIy~e~v~DLL~~~~~~~~~~~~~~~~~~~~~~~~~l~i~e~~~~~~~i~gl~e~~v~s~~e~~~~l~~g~~~R~~~ 216 (1034)
||+|||||.|+|||.+.... .....+.|++++.++++|.|++++.|.+++|++.+|..|..+|.++
T Consensus 192 S~lEIYnE~i~DLL~~~~~~--------------~~~~~l~ire~~~~g~~V~gl~e~~V~s~~e~~~ll~~G~~~R~~~ 257 (443)
T 2owm_A 192 SYFEVYNEHVRDLLAPVVPN--------------KPPYYLKVRESPTEGPYVKDLTEVPVRGLEEIIRWMRIGDGSRTVA 257 (443)
T ss_dssp EEEEEETTEEEETTSCCCSS--------------CCCCCCEEEEETTTEEEEETCCCEECCSHHHHHHHHHHHHTTSCBC
T ss_pred EEEEEECCEEEECCCCCCCC--------------CCCCCCCEEECCCCCEECCCCEEEECCCHHHHHHHHHHHHHHCCCC
T ss_conf 99999889756856763457--------------8653443037799999526877998289999999999997337863
Q ss_pred CCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 67888899973689999998541368876799999988876379967968657998544466883034566379976447
Q 001669 217 STNMNNQSSRSHAIFTITLEQMRKLSPVSLGDSSPNESMNEEYLCAKLHLVDLAGSERAKRTGSDGLRFKEGVHINRGLL 296 (1034)
Q Consensus 217 ~t~~n~~SSRSH~if~i~i~q~~~~~~~~~~~~~~~~~~~~~~~~skl~fVDLAGsEr~~~~~~~g~r~~E~~~IN~sL~ 296 (1034)
+|.+|..|||||+||+|+|.+...... ........|+|+|||||||||+.++++.|.|++|+.+||+||+
T Consensus 258 ~T~~N~~SSRSH~Ifti~v~~~~~~~~----------~~~~~~~~skL~lVDLAGSER~~~t~~~g~rlkE~~~INkSL~ 327 (443)
T 2owm_A 258 STKMNDTSSRSHAVFTIMLKQIHHDLE----------TDDTTERSSRIRLVDLAGSERAKSTEATGQRLREGSNINKSLT 327 (443)
T ss_dssp SSSSSCBCTTEEEEEEEEEEEEC-----------------CCEEEEEEEEEECCCCCC--------------CCSSHHHH
T ss_pred CCCCCCCCCCCEEEEEEEEEEEECCCC----------CCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHCHHHH
T ss_conf 375877667771999999998603567----------8874068877999979887535656776641211001057899
Q ss_pred HHHHHHHHHHCCCCC-----------------CCCCCCCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHH
Q ss_conf 768999872014568-----------------899655678863225322038998502788632987667898898999
Q 001669 297 ALGNVISALGDDKKR-----------------KEGVHVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLK 359 (1034)
Q Consensus 297 aL~~vi~~L~~~~~~-----------------~~~~~ipyrdSkLT~lLqdsLggns~t~~I~~vsp~~~~~~eTl~TL~ 359 (1034)
+||+||.+|++.... +...||||||||||+||+|+||||++|+|||||||+ +++||++||+
T Consensus 328 aLg~vI~aL~~~~~~~~~~~~~~~~g~~~~~~~~~~hVPYRdSkLTrLLqdsLgGnskT~mIa~iSP~--~~~ETlsTLr 405 (443)
T 2owm_A 328 TLGRVIAALADPKSSASRPSSPVKSGRGRTPGPANSVVPYRDSVLTWLLKDSLGGNSKTAMIACISPT--DYDETLSTLR 405 (443)
T ss_dssp HHHHHHHHHCC-------------------------CCCGGGSHHHHHSTTTTTSSCEEEEEEEECSS--CHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCC--CHHHHHHHHH
T ss_conf 99999999860455555444322234333445677745574547688888862799708999981643--0789999999
Q ss_pred HHHHHHCCCCCCCCCC-CCCCHHH
Q ss_conf 9999730127764256-8862799
Q 001669 360 YANRARNIQNKPIVNR-DPMSTEM 382 (1034)
Q Consensus 360 ~a~r~r~i~~kP~vn~-~~~~~ei 382 (1034)
||+||++|+|+|.+|. |+.....
T Consensus 406 fA~rak~I~n~~~vN~~d~~~~~~ 429 (443)
T 2owm_A 406 YADQAKRIRTRAVVNQVDGVSAAE 429 (443)
T ss_dssp HHHHHTTCEECCCCCCC-------
T ss_pred HHHHHHHCCCCCEECCCCCCCHHH
T ss_conf 999985445633351357766788
No 6
>3cob_A Kinesin heavy chain-like protein; motor, switch II, loop L11, conformation, nucleotide, ATP-binding, microtubule, motor protein; HET: ADP; 2.20A {Solanum tuberosum} SCOP: c.37.1.9 PDB: 3cnz_A* 1sdm_A* 3h4s_A*
Probab=1.00 E-value=1 Score=690.05 Aligned_cols=346 Identities=35% Similarity=0.572 Sum_probs=309.0
Q ss_pred CCCEEEEEEECCCCCCCCCCCCCCEEEEECCCCCEEE-----CCCEEEECEEECCCCCCHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 8655899970799982000399735998289872123-----47014613350999997388898853656888424985
Q 001669 8 DCCVKVAVHVRPLIGDERAQGCKDCVAVVPGKPQVQI-----GTHSFTFDHVYGSTGSPSSAMFDECIAPLVDGLFQGYN 82 (1034)
Q Consensus 8 ~~~v~V~vRiRP~~~~E~~~~~~~~~~~~~~~~~v~~-----~~~~f~FD~Vf~~~~s~q~~vy~~~v~plv~~~l~G~n 82 (1034)
.++|+|+|||||+.+.|...++..++.. .+...+.. ..+.|+||+||++.++ |.+||+. +.|+|+++|+|||
T Consensus 4 ~~~i~V~vRvRP~~~~E~~~~~~~~~~~-~~~~~v~~~~~~~~~~~f~FD~Vf~~~~~-Q~~Vy~~-~~~lv~~~l~G~n 80 (369)
T 3cob_A 4 KGKIRVYCRLRPLCEKEIIAKERNAIRS-VDEFTVEHLWKDDKAKQHMYDRVFDGNAT-QDDVFED-TKYLVQSAVDGYN 80 (369)
T ss_dssp CCBCEEEEEECCCCHHHHHTTCCBCEEE-CSSSEEEEECTTSCEEEEECSEEECTTCC-HHHHHHT-TTHHHHHHHTTCE
T ss_pred CCCEEEEEECCCCCHHHCCCCCCEEEEC-CCCEEEEECCCCCCCEEEECCEEECCCCC-CCEEHHH-HHHHHHHHHCCCC
T ss_conf 9984999987999834546798379976-99679993378998268865989899997-3140221-3132576646971
Q ss_pred EEEEEECCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECHHHHHHCCCCCCCCCCCCCC
Q ss_conf 16997235899954032679999987650757999999998721147607999841012011662328999999999888
Q 001669 83 ATVLAYGQTGSGKTYTMGTGFKDGYQTGIIPLVMNVLFSKIETLKDQTEFQLHVSFIEILKEEVRDLLDPPCLNKPDTAN 162 (1034)
Q Consensus 83 ~tilayG~tgSGKT~Tl~g~~~~~~~~Glipr~~~~LF~~i~~~~~~~~~~v~vS~~EIy~e~v~DLL~~~~~~~~~~~~ 162 (1034)
+||||||||||||||||+|+ ...+|||||++.+||..+........|.|.+||+|||||.|+|||.|...
T Consensus 81 ~tifAYGqTGSGKTyTM~G~---~~~~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~------- 150 (369)
T 3cob_A 81 VCIFAYGQTGSGKTFTIYGA---DSNPGLTPRAMSELFRIMKKDSNKFSFSLKAYMVELYQDTLVDLLLPKQA------- 150 (369)
T ss_dssp EEEEEEECTTSSHHHHHTBC---SSSBCHHHHHHHHHHHHHHHTTTTEEEEEEEEEEEECSSCEEESSCCSSS-------
T ss_pred EEEEEECCCCCCCEEEECCC---CCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCEEEECCCCCCC-------
T ss_conf 59998789999883751179---98886258999999999874135752677899987707632345787556-------
Q ss_pred CCCCCCCCCCCCCCEEEECCCCCEEECCCEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCC
Q ss_conf 98886457999981467558993897176489907977899999980012344567888899973689999998541368
Q 001669 163 GHTGKVTVPGKPPIQIRETSNGVITLAGSTEVSVSSLKEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLS 242 (1034)
Q Consensus 163 ~~~~~~~~~~~~~l~i~e~~~~~~~i~gl~e~~v~s~~e~~~~l~~g~~~R~~~~t~~n~~SSRSH~if~i~i~q~~~~~ 242 (1034)
....+.|++++.++++|.|++++.|.|+++++.+|..|..+|.+++|.+|..|||||+||+|+|.+....
T Consensus 151 ---------~~~~l~i~e~~~~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~- 220 (369)
T 3cob_A 151 ---------KRLKLDIKKDSKGMVSVENVTVVSISTYEELKTIIQRGSEQRHTTGTLMNEQSSRSHLIVSVIIESTNLQ- 220 (369)
T ss_dssp ---------CCCCCEEEECTTSCEEEETCCCEEECSHHHHHHHHHHHHHHTCCCSCCTTCHHHHSEEEEEEEEEEEETT-
T ss_pred ---------CCCCEEEEECCCCCEECCCCEEEEECCHHHHHHHHHHHHHCCEEECCCCCCCCCCCEEEEEEEEEEECCC-
T ss_conf ---------7764278997999888059879980899999999998752552303447787776338999999985278-
Q ss_pred CCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 87679999998887637996796865799854446688303456637997644776899987201456889965567886
Q 001669 243 PVSLGDSSPNESMNEEYLCAKLHLVDLAGSERAKRTGSDGLRFKEGVHINRGLLALGNVISALGDDKKRKEGVHVPYRDS 322 (1034)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~skl~fVDLAGsEr~~~~~~~g~r~~E~~~IN~sL~aL~~vi~~L~~~~~~~~~~~ipyrdS 322 (1034)
......|+|+|||||||||+.++++.|.+++|+.+||+||++||+||.+|+++.. |||||||
T Consensus 221 -------------~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~-----hvPyRdS 282 (369)
T 3cob_A 221 -------------TQAIARGKLSFVDLAGSERVKKSGSAGNQLKEAQSINKSLSALGDVISALSSGNQ-----HIPYRNH 282 (369)
T ss_dssp -------------TCCEEEEEEEEEECCCSSCCCCCSSCSHHHHHHHHHTHHHHHHHHHHHHHHTTCS-----CCCGGGC
T ss_pred -------------CCCEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC-----CCCCCCC
T ss_conf -------------7727888999996887875443476302347787877889999999999864899-----6787477
Q ss_pred HHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 32253220389985027886329876678988989999999730127764256886279999999999999999
Q 001669 323 KLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYANRARNIQNKPIVNRDPMSTEMLKMRQQLEFLQAEL 396 (1034)
Q Consensus 323 kLT~lLqdsLggns~t~~I~~vsp~~~~~~eTl~TL~~a~r~r~i~~kP~vn~~~~~~ei~kLr~qle~L~~eL 396 (1034)
|||+||+|+|||||+|+|||||||+..+++||++||+||+|+++|+|+|.+|.++ .++.+|++++..++.++
T Consensus 283 kLT~lLqdsLgGnskt~mIa~isP~~~~~~ETl~TLrfA~rak~i~~~~~~n~~~--~ei~~L~~~l~~~~~~~ 354 (369)
T 3cob_A 283 KLTMLMSDSLGGNAKTLMFVNISPAESNLDETHNSLTYASRVRSIVNDPSKNVSS--KEVARLKKLVSYWKEQA 354 (369)
T ss_dssp HHHHHTTTTTTSSSEEEEEEEECCBGGGHHHHHHHHHHHHHHHTCBCCCCCCEEC--HHHHHHHHHTTCC----
T ss_pred HHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCH--HHHHHHHHHHHHHHHHC
T ss_conf 7788788762898527999994772002899999999999986545677415788--99999999999999764
No 7
>1goj_A Kinesin, kinesin heavy chain; motor protein, ATPase; HET: ADP; 2.3A {Neurospora crassa} SCOP: c.37.1.9
Probab=1.00 E-value=1 Score=689.81 Aligned_cols=340 Identities=41% Similarity=0.611 Sum_probs=307.4
Q ss_pred CCCCCCEEEEEEECCCCCCCCCCCCCCEEEEECCCCCEEE---CCCEEEECEEECCCCCCHHHHHHHHHHHHHHHHHCCC
Q ss_conf 9998655899970799982000399735998289872123---4701461335099999738889885365688842498
Q 001669 5 GGEDCCVKVAVHVRPLIGDERAQGCKDCVAVVPGKPQVQI---GTHSFTFDHVYGSTGSPSSAMFDECIAPLVDGLFQGY 81 (1034)
Q Consensus 5 ~~~~~~v~V~vRiRP~~~~E~~~~~~~~~~~~~~~~~v~~---~~~~f~FD~Vf~~~~s~q~~vy~~~v~plv~~~l~G~ 81 (1034)
++..++|+|+|||||+.+.|...|...|+.+.+....... ..+.|+||+||++.++ |++||+.++.|+|+++|+||
T Consensus 2 s~~~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~~~~~~~~~~~~~f~FD~Vf~~~~~-Q~~Vy~~~~~plv~~~l~G~ 80 (355)
T 1goj_A 2 SSSANSIKVVARFRPQNRVEIESGGQPIVTFQGPDTCTVDSKEAQGSFTFDRVFDMSCK-QSDIFDFSIKPTVDDILNGY 80 (355)
T ss_dssp CCSSCBCEEEEEECCCCHHHHTTTCCBCEEECSTTEEEECSTTCCEEEECSEEECTTCC-HHHHHHHHTHHHHHHHTTTC
T ss_pred CCCCCCEEEEEECCCCCHHHHHCCCCEEEEECCCCEEEECCCCCCCEEEECEEECCCCC-CHHHHHHHHHHHHHHHHCCC
T ss_conf 98999869999889999578506996399986998499726897527761959899876-27999999999999985798
Q ss_pred CEEEEEECCCCCCCCEECCCCCC-CCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECHHHHHHCCCCCCCCCCCC
Q ss_conf 51699723589995403267999-99876507579999999987211476079998410120116623289999999998
Q 001669 82 NATVLAYGQTGSGKTYTMGTGFK-DGYQTGIIPLVMNVLFSKIETLKDQTEFQLHVSFIEILKEEVRDLLDPPCLNKPDT 160 (1034)
Q Consensus 82 n~tilayG~tgSGKT~Tl~g~~~-~~~~~Glipr~~~~LF~~i~~~~~~~~~~v~vS~~EIy~e~v~DLL~~~~~~~~~~ 160 (1034)
|+||||||||||||||||+|+.. +...+|||||++.+||..+........|.|++||+|||||+|+|||.+.
T Consensus 81 n~tifAYGqTGSGKTyTm~G~~~~~~~~~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~------- 153 (355)
T 1goj_A 81 NGTVFAYGQTGAGKSYTMMGTSIDDPDGRGVIPRIVEQIFTSILSSAANIEYTVRVSYMEIYMERIRDLLAPQ------- 153 (355)
T ss_dssp CEEEEEECSTTSSHHHHHTBSCTTSTTTBCHHHHHHHHHHHHHHTSCTTEEEEEEEEEEEEETTEEEETTSTT-------
T ss_pred CCEEEEECCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCEEEECCCCC-------
T ss_conf 2228888999998606751578877666870679999999998714568508999999999789778844576-------
Q ss_pred CCCCCCCCCCCCCCCCEEEECCCCCEEECCCEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEC
Q ss_conf 88988864579999814675589938971764899079778999999800123445678888999736899999985413
Q 001669 161 ANGHTGKVTVPGKPPIQIRETSNGVITLAGSTEVSVSSLKEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRK 240 (1034)
Q Consensus 161 ~~~~~~~~~~~~~~~l~i~e~~~~~~~i~gl~e~~v~s~~e~~~~l~~g~~~R~~~~t~~n~~SSRSH~if~i~i~q~~~ 240 (1034)
...+.|++++.++++|.|++++.|.|++|++.+|..|..+|.+++|.+|..|||||+||+|+|.+...
T Consensus 154 ------------~~~l~i~e~~~~g~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~ 221 (355)
T 1goj_A 154 ------------NDNLPVHEEKNRGVYVKGLLEIYVSSVQEVYEVMRRGGNARAVAATNMNQESSRSHSIFVITITQKNV 221 (355)
T ss_dssp ------------CCSCCEEEETTTEEEETTCCCEECCSHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEEEEEEEEEET
T ss_pred ------------CCCCEEEECCCCCEEECCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEECC
T ss_conf ------------67852688589999606877995799999999999997524723344789877760999999999606
Q ss_pred CCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 68876799999988876379967968657998544466883034566379976447768999872014568899655678
Q 001669 241 LSPVSLGDSSPNESMNEEYLCAKLHLVDLAGSERAKRTGSDGLRFKEGVHINRGLLALGNVISALGDDKKRKEGVHVPYR 320 (1034)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~skl~fVDLAGsEr~~~~~~~g~r~~E~~~IN~sL~aL~~vi~~L~~~~~~~~~~~ipyr 320 (1034)
. .+....|+|+|||||||||+.++++.|.+++|+.+||+||++||+||.+|++++. .|||||
T Consensus 222 ~--------------~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~IN~SL~aLg~vI~aL~~~~~----~hvPyR 283 (355)
T 1goj_A 222 E--------------TGSAKSGQLFLVDLAGSEKVGKTGASGQTLEEAKKINKSLSALGMVINALTDGKS----SHVPYR 283 (355)
T ss_dssp T--------------TTEEEEEEEEEEECCCCSCCTTSSSCCCCTTTTGGGTSHHHHHHHHHHHHHHCSC----SCCCGG
T ss_pred C--------------CCCEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC----CCCCCC
T ss_conf 8--------------8955665799998988774432466026678887651679999999999864899----988775
Q ss_pred CCHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
Q ss_conf 86322532203899850278863298766789889899999997301277642568862799
Q 001669 321 DSKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYANRARNIQNKPIVNRDPMSTEM 382 (1034)
Q Consensus 321 dSkLT~lLqdsLggns~t~~I~~vsp~~~~~~eTl~TL~~a~r~r~i~~kP~vn~~~~~~ei 382 (1034)
|||||+||+|+||||++|+|||||||+..+++||++||+||+||++|+|+|.+|.++...++
T Consensus 284 dSkLT~lLqdsLgGns~t~mI~~isP~~~~~~ETl~TL~fA~rak~I~n~~~vn~~~~~~~l 345 (355)
T 1goj_A 284 DSKLTRILQESLGGNSRTTLIINCSPSSYNDAETLSTLRFGMRAKSIKNKAKVNAELSPAEL 345 (355)
T ss_dssp GCHHHHHTGGGTTSSCEEEEEEEECCBGGGHHHHHHHHHHHHHHHTCBCCCCCCSSSSCSSS
T ss_pred CCHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEECCCCCHHHH
T ss_conf 57999999997289976899999796302699999999999997236677556787999999
No 8
>1x88_A Kinesin-like protein KIF11; switch II, motor domain, NECK linker, cell cycle; HET: ADP NAT; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 3hqd_A* 3ken_A* 2pg2_A* 1yrs_A* 2fme_A* 2g1q_A* 2gm1_A* 1ii6_A* 2uyi_A* 2uym_A* 2wog_A* 2x2r_A* 2x7c_A* 2x7d_A* 2x7e_A* 2xae_A* 3k3b_A* 3k5e_A* 3l9h_A* 1q0b_A* ...
Probab=1.00 E-value=1 Score=684.78 Aligned_cols=337 Identities=41% Similarity=0.630 Sum_probs=301.1
Q ss_pred CCCCCCEEEEEEECCCCCCCCCCCCCCEEEEECCCCCEEE---------CCCEEEECEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf 9998655899970799982000399735998289872123---------4701461335099999738889885365688
Q 001669 5 GGEDCCVKVAVHVRPLIGDERAQGCKDCVAVVPGKPQVQI---------GTHSFTFDHVYGSTGSPSSAMFDECIAPLVD 75 (1034)
Q Consensus 5 ~~~~~~v~V~vRiRP~~~~E~~~~~~~~~~~~~~~~~v~~---------~~~~f~FD~Vf~~~~s~q~~vy~~~v~plv~ 75 (1034)
.+..++|+|+|||||+...|...++..++.+.+....+.+ ..+.|+||+||++.++ |.+||+.++.|+|+
T Consensus 4 ~~~~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~f~FD~Vf~~~~~-Q~~Vy~~~~~plv~ 82 (359)
T 1x88_A 4 EEKGKNIQVVVRCRPFNLAERKASAHSIVECDPVRKEVSVRTGGLADKSSRKTYTFDMVFGASTK-QIDVYRSVVCPILD 82 (359)
T ss_dssp -----CCEEEEEECCCCHHHHHTTCCCCEEEETTTTEEEEEEEEETTEEEEEEEECSEEECTTCC-HHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEEEECCCCHHHHHCCCCEEEEECCCCCEEEEECCCCCCCCCCEEEECEEEEECCCC-HHHHHHHHHHHHHH
T ss_conf 78999859999908999256304996499975998579983787667767448754079852674-53789999888689
Q ss_pred HHHCCCCEEEEEECCCCCCCCEECCCCCCC--------CCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECHHHHH
Q ss_conf 842498516997235899954032679999--------987650757999999998721147607999841012011662
Q 001669 76 GLFQGYNATVLAYGQTGSGKTYTMGTGFKD--------GYQTGIIPLVMNVLFSKIETLKDQTEFQLHVSFIEILKEEVR 147 (1034)
Q Consensus 76 ~~l~G~n~tilayG~tgSGKT~Tl~g~~~~--------~~~~Glipr~~~~LF~~i~~~~~~~~~~v~vS~~EIy~e~v~ 147 (1034)
++|+|||+||||||||||||||||+|+... ...+|||||++.+||..+.. ....|.|.|||+|||||+|+
T Consensus 83 ~~l~G~n~tifAYGqTGSGKTyTM~G~~~~~~~~~~~~~~~~Giipr~~~~lF~~i~~--~~~~~~v~vS~~EIYnE~i~ 160 (359)
T 1x88_A 83 EVIMGYNCTIFAYGQTGTGKTFTMEGERSPNEEYTWEEDPLAGIIPRTLHQIFEKLTD--NGTEFSVKVSLLEIYNEELF 160 (359)
T ss_dssp HHHTTCEEEEEEEECTTSSHHHHHTBCCCGGGCSCGGGCTTBCHHHHHHHHHHHHTSS--SSEEEEEEEEEEEEETTEEE
T ss_pred HHHCCCCEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC--CCCEEEEEEEEEEEECCEEE
T ss_conf 8737982489984789998756885667766544444566687038999999987741--58259999999999576100
Q ss_pred HCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCC--CCEEECCCEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 328999999999888988864579999814675589--938971764899079778999999800123445678888999
Q 001669 148 DLLDPPCLNKPDTANGHTGKVTVPGKPPIQIRETSN--GVITLAGSTEVSVSSLKEMAACLEQGSLSRATGSTNMNNQSS 225 (1034)
Q Consensus 148 DLL~~~~~~~~~~~~~~~~~~~~~~~~~l~i~e~~~--~~~~i~gl~e~~v~s~~e~~~~l~~g~~~R~~~~t~~n~~SS 225 (1034)
|||+|... ....+.+++++. ++++|.|++++.|.|++|++.+|..|..+|.+++|.+|..||
T Consensus 161 DLL~~~~~----------------~~~~l~i~~~~~~~~~v~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SS 224 (359)
T 1x88_A 161 DLLNPSSD----------------VSERLQMFDDPRNKRGVIIKGLEEITVHNKDEVYQILEKGAAKRTTAATLMNAYSS 224 (359)
T ss_dssp ETTCTTSC----------------TTCCBEEEEETTEEEEEEEETCCCEEECSGGGHHHHHHHHHHHHHHHHHHSTTHHH
T ss_pred EHHCCCCC----------------CCCCCEEEECCCCCCCEEECCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 12115655----------------56660588655778988982878998499999999999877514612254778777
Q ss_pred CCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 73689999998541368876799999988876379967968657998544466883034566379976447768999872
Q 001669 226 RSHAIFTITLEQMRKLSPVSLGDSSPNESMNEEYLCAKLHLVDLAGSERAKRTGSDGLRFKEGVHINRGLLALGNVISAL 305 (1034)
Q Consensus 226 RSH~if~i~i~q~~~~~~~~~~~~~~~~~~~~~~~~skl~fVDLAGsEr~~~~~~~g~r~~E~~~IN~sL~aL~~vi~~L 305 (1034)
|||+||+|+|.+...... .......|+|+|||||||||+.++++.|.|++|+.+||+||++||+||.+|
T Consensus 225 RSH~if~i~i~~~~~~~~-----------~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL 293 (359)
T 1x88_A 225 RSHSVFSVTIHMKETTID-----------GEELVKIGKLNLVDLAGSENIGRSGAVDKRAREAGNINQSLLTLGRVITAL 293 (359)
T ss_dssp HCEEEEEEEEEEEEECTT-----------SCEEEEEEEEEEEECCCCCC---------------CCCHHHHHHHHHHHHH
T ss_pred CCCEEEEEEEEEECCCCC-----------CCCEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 762899999987435578-----------871377889999818998735435886320177765307899999999998
Q ss_pred HCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 01456889965567886322532203899850278863298766789889899999997301277642568
Q 001669 306 GDDKKRKEGVHVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYANRARNIQNKPIVNRD 376 (1034)
Q Consensus 306 ~~~~~~~~~~~ipyrdSkLT~lLqdsLggns~t~~I~~vsp~~~~~~eTl~TL~~a~r~r~i~~kP~vn~~ 376 (1034)
++.. .||||||||||+||+|+||||++|+|||||||+..+++||++||+||+||++|+|+|.+|..
T Consensus 294 ~~~~-----~hvPyRdSkLT~lLqdsLgGnskt~mIa~vsP~~~~~~ETl~TLrfA~rak~I~n~p~vn~~ 359 (359)
T 1x88_A 294 VERT-----PHVPYRESKLTRILQDSLGGRTRTSIIATISPASLNLEETLSTLEYAHRAKNILNKPEVNQK 359 (359)
T ss_dssp HTTC-----SCCCGGGSHHHHHTGGGSSSSSEEEEEEEECCCGGGHHHHHHHHHHHHHHTTCCCCCC----
T ss_pred HCCC-----CCCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEECCC
T ss_conf 6479-----97762256688999997589972999999789745689999999999998656676614779
No 9
>1t5c_A CENP-E protein, centromeric protein E; kinesin motor-domain-ADP complex, stranded beta-sheet core with solvent exposed alpha-helices; HET: ADP PIN; 2.50A {Homo sapiens}
Probab=1.00 E-value=1 Score=681.90 Aligned_cols=338 Identities=41% Similarity=0.630 Sum_probs=300.8
Q ss_pred CCCCEEEEEEECCCCCCCCCCCCCCEEEEECCCCCEEE--CCCEEEECEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEE
Q ss_conf 98655899970799982000399735998289872123--4701461335099999738889885365688842498516
Q 001669 7 EDCCVKVAVHVRPLIGDERAQGCKDCVAVVPGKPQVQI--GTHSFTFDHVYGSTGSPSSAMFDECIAPLVDGLFQGYNAT 84 (1034)
Q Consensus 7 ~~~~v~V~vRiRP~~~~E~~~~~~~~~~~~~~~~~v~~--~~~~f~FD~Vf~~~~s~q~~vy~~~v~plv~~~l~G~n~t 84 (1034)
+.++|+|+|||||+...|...|...++.+......+.. +.+.|+||+||++.++ |++||+.++.|+|+++|+|||+|
T Consensus 2 e~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~~~i~~~~~~~~F~FD~Vf~~~~t-Q~~Vy~~~~~plv~~~l~G~n~t 80 (349)
T 1t5c_A 2 EEGAVAVCVRVRPLNSREESLGETAQVYWKTDNNVIYQVDGSKSFNFDRVFHGNET-TKNVYEEIAAPIIDSAIQGYNGT 80 (349)
T ss_dssp -CCCEEEEEEECCCSCSSCTTTTCCCCCEEEETTEEEETTSSCEEECSCEECTTSC-HHHHHHHTTHHHHHHHHTTCCEE
T ss_pred CCCCEEEEEECCCCCHHHHCCCCCCEEEEECCCCEEEECCCCEEEECCEEECCCCC-HHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 98997999988988915642599747999589976997799828878979899999-89999999899999987488640
Q ss_pred EEEECCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 99723589995403267999998765075799999999872114760799984101201166232899999999988898
Q 001669 85 VLAYGQTGSGKTYTMGTGFKDGYQTGIIPLVMNVLFSKIETLKDQTEFQLHVSFIEILKEEVRDLLDPPCLNKPDTANGH 164 (1034)
Q Consensus 85 ilayG~tgSGKT~Tl~g~~~~~~~~Glipr~~~~LF~~i~~~~~~~~~~v~vS~~EIy~e~v~DLL~~~~~~~~~~~~~~ 164 (1034)
|||||||||||||||+|+ ...+|||||++.+||..+... ....|.|+|||+|||||+|+|||.+..
T Consensus 81 ifAYGqTGSGKTyTM~G~---~~~~Giipr~~~~lF~~i~~~-~~~~~~v~vS~~EIYnE~i~DLL~~~~---------- 146 (349)
T 1t5c_A 81 IFAYGQTASGKTYTMMGS---EDHLGVIPRAIHDIFQKIKKF-PDREFLLRVSYMEIYNETITDLLCGTQ---------- 146 (349)
T ss_dssp EEEEESTTSSHHHHHTBC---SSSBCHHHHHHHHHHHHGGGC-TTEEEEEEEEEEEEETTEEEESSSSSC----------
T ss_pred EEEECCCCCCCCEEEECC---CCCCCHHHHHHHHHHHHHHHC-CCCCEEEEEEEEEEECCEEEECCCCCC----------
T ss_conf 562158999987687468---888745889999999999747-688679998899984877788667877----------
Q ss_pred CCCCCCCCCCCCEEEECCCCCEEECCCEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCC
Q ss_conf 88645799998146755899389717648990797789999998001234456788889997368999999854136887
Q 001669 165 TGKVTVPGKPPIQIRETSNGVITLAGSTEVSVSSLKEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLSPV 244 (1034)
Q Consensus 165 ~~~~~~~~~~~l~i~e~~~~~~~i~gl~e~~v~s~~e~~~~l~~g~~~R~~~~t~~n~~SSRSH~if~i~i~q~~~~~~~ 244 (1034)
...++.|++++.++++|.|++++.|.|+++++.+|..|..+|.+++|.+|..|||||+||+|+|.+.....+.
T Consensus 147 -------~~~~l~i~ed~~~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~ 219 (349)
T 1t5c_A 147 -------KMKPLIIREDVNRNVYVADLTEEVVYTSEMALKWITKGEKSRHYGETKMNQRSSRSHTIFRMILESREKGEPS 219 (349)
T ss_dssp -------TTCCEEEEETTTTEEEETTCCCEECSSHHHHHHHHHHHHHTTSSSSSSSSCTTTTCEEEEEEEEEEEECC---
T ss_pred -------CCCCCEEEECCCCCEEECCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCC
T ss_conf -------7877469988999987448879986899999999997523345233657788887639999999985168876
Q ss_pred CCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHH
Q ss_conf 67999999888763799679686579985444668830345663799764477689998720145688996556788632
Q 001669 245 SLGDSSPNESMNEEYLCAKLHLVDLAGSERAKRTGSDGLRFKEGVHINRGLLALGNVISALGDDKKRKEGVHVPYRDSKL 324 (1034)
Q Consensus 245 ~~~~~~~~~~~~~~~~~skl~fVDLAGsEr~~~~~~~g~r~~E~~~IN~sL~aL~~vi~~L~~~~~~~~~~~ipyrdSkL 324 (1034)
...+....|+|+|||||||||+.++++.|.|++|+.+||+||++||+||.+|+++++ ..|||||||||
T Consensus 220 ---------~~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~---~~hvPyRdSkL 287 (349)
T 1t5c_A 220 ---------NCEGSVKVSHLNLVDLAGSERAAQTGAAGVRLKEGCNINRSLFILGQVIKKLSDGQV---GGFINYRDSKL 287 (349)
T ss_dssp -------------CEEEEEEEEEECCCGGGTC-------CCCSSSCCCHHHHHHHHHHHHHHHTCC---TTSSCGGGSHH
T ss_pred ---------CCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC---CCCCCCCCCHH
T ss_conf ---------767637899999997998753221478641113354776899999999999855687---77776556377
Q ss_pred HHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCH
Q ss_conf 25322038998502788632987667898898999999973012776425688627
Q 001669 325 TRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYANRARNIQNKPIVNRDPMST 380 (1034)
Q Consensus 325 T~lLqdsLggns~t~~I~~vsp~~~~~~eTl~TL~~a~r~r~i~~kP~vn~~~~~~ 380 (1034)
|+||||+||||++|+|||||||+ +++||++||+||+||++|+|+|.+|.++...
T Consensus 288 T~lLqdsLgGnskt~mI~~isP~--~~~ETlsTL~fA~rak~I~n~~~vn~~~~~~ 341 (349)
T 1t5c_A 288 TRILQNSLGGNAKTRIICTITPV--SFDETLTALQFASTAKYMKNTPYVNEVSTDE 341 (349)
T ss_dssp HHHTGGGTTSSSEEEEEEEECTT--CSHHHHHHHHHHHHHTTCCCCCCCCEEC---
T ss_pred HHHHHHHCCCCCEEEEEEEECCC--CHHHHHHHHHHHHHHHHCCCCCEECCCCCCC
T ss_conf 89999861899629999994777--7899999999999974536676536678888
No 10
>4a14_A Kinesin, kinesin-like protein KIF7; motor protein, motor domain; HET: ADP; 1.60A {Homo sapiens} SCOP: c.37.1.0 PDB: 2xt3_A*
Probab=1.00 E-value=1 Score=680.50 Aligned_cols=337 Identities=48% Similarity=0.781 Sum_probs=303.3
Q ss_pred CCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEECCCCCEEEC-CCEEEECEEECCCCCCHHHHHHHHHHHHHHHHHCC
Q ss_conf 89999986558999707999820003997359982898721234-70146133509999973888988536568884249
Q 001669 2 ETGGGEDCCVKVAVHVRPLIGDERAQGCKDCVAVVPGKPQVQIG-THSFTFDHVYGSTGSPSSAMFDECIAPLVDGLFQG 80 (1034)
Q Consensus 2 ~~~~~~~~~v~V~vRiRP~~~~E~~~~~~~~~~~~~~~~~v~~~-~~~f~FD~Vf~~~~s~q~~vy~~~v~plv~~~l~G 80 (1034)
.+.+.+.++|+|+|||||+.+.|...++..|+.+.++...+.++ .+.|+||+||++.++ |++||+.++.|+|+++|+|
T Consensus 4 ~~~~~~~~~i~V~vRvRP~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~f~FD~Vf~~~~~-Q~~vy~~~~~plv~~~l~G 82 (344)
T 4a14_A 4 GLPGAEEAPVRVALRVRPLLPKELLHGHQSCLQVEPGLGRVTLGRDRHFGFHVVLAEDAG-QEAVYQACVQPLLEAFFEG 82 (344)
T ss_dssp -----CCCCCEEEEEECCCCHHHHHTTCCBCEEEEGGGTEEEETTTEEEECSEEECTTCC-HHHHHHHHTHHHHHHHHTT
T ss_pred CCCCCCCCCEEEEEEECCCCHHHHHCCCEEEEEECCCCCEEEECCCCEEEEEEEEECCCC-HHHHHHHHHHHHHHHHHHH
T ss_conf 888743266589997235562877526705899758974178536535778999834764-6699999889999999711
Q ss_pred CCEEEEEECCCCCCCCEECCCCCCC---CCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECHHHHHHCCCCCCCCC
Q ss_conf 8516997235899954032679999---9876507579999999987211476079998410120116623289999999
Q 001669 81 YNATVLAYGQTGSGKTYTMGTGFKD---GYQTGIIPLVMNVLFSKIETLKDQTEFQLHVSFIEILKEEVRDLLDPPCLNK 157 (1034)
Q Consensus 81 ~n~tilayG~tgSGKT~Tl~g~~~~---~~~~Glipr~~~~LF~~i~~~~~~~~~~v~vS~~EIy~e~v~DLL~~~~~~~ 157 (1034)
||+||||||||||||||||+|+... ...+|||||++.+||..+... ....|.|.+||+|||||+|+|||++..
T Consensus 83 ~n~tifAYGqTGSGKTyTm~G~~~~~~~~~~~Giipr~~~~lF~~i~~~-~~~~~~v~vS~~EIYnE~i~DLL~~~~--- 158 (344)
T 4a14_A 83 FNATVFAYGQTGSGKTYTMGEASVASLLEDEQGIVPRAMAEAFKLIDEN-DLLDCLVHVSYLEVYKEEFRDLLEVGT--- 158 (344)
T ss_dssp CCEEEEEESSTTSSHHHHHCC--------CCCCHHHHHHHHHHHHHHHC-TTSEEEEEEEEEEEETTEEEETTSSCC---
T ss_pred CCEEEEEECCCCCCCEEEECCCCHHHHHHCCCCCCHHHHHHHHHHCCCC-CCEEEEEEEEHHHHHHHHHHHHHHHCC---
T ss_conf 6705899524688724765551134454211587449999999733656-630168777313556899999987501---
Q ss_pred CCCCCCCCCCCCCCCCCCCEEEECCCCCEEECCCEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEEEE
Q ss_conf 99888988864579999814675589938971764899079778999999800123445678888999736899999985
Q 001669 158 PDTANGHTGKVTVPGKPPIQIRETSNGVITLAGSTEVSVSSLKEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQ 237 (1034)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~l~i~e~~~~~~~i~gl~e~~v~s~~e~~~~l~~g~~~R~~~~t~~n~~SSRSH~if~i~i~q 237 (1034)
....+.|++++.++++|.|++++.|.+++|++.+|..|..+|.+++|.+|..|||||+||+|+|.+
T Consensus 159 --------------~~~~l~i~e~~~~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~If~i~v~~ 224 (344)
T 4a14_A 159 --------------ASRDIQLREDERGNVVLCGVKEVDVEGLDEVLSLLEMGNAARHTGATHLNHLSSRSHTVFTVTLEQ 224 (344)
T ss_dssp --------------CGGGCEEEECTTSCEEEESCCCEECCSHHHHHHHHHHHHHHHHC------CCGGGSEEEEEEEEEE
T ss_pred --------------CCCCCEEEECCCCCEEEEEEEECCCCCHHHHHHHHHHCCHHCCCCCCHHHHCCCCCCEEEEEEEEE
T ss_conf --------------234306410367988999314414347899999998434110257310000135540489998520
Q ss_pred EECCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 41368876799999988876379967968657998544466883034566379976447768999872014568899655
Q 001669 238 MRKLSPVSLGDSSPNESMNEEYLCAKLHLVDLAGSERAKRTGSDGLRFKEGVHINRGLLALGNVISALGDDKKRKEGVHV 317 (1034)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~skl~fVDLAGsEr~~~~~~~g~r~~E~~~IN~sL~aL~~vi~~L~~~~~~~~~~~i 317 (1034)
....... ...+.......|+|+|||||||||+.++++.|.|++|+.+||+||++||+||.+|++.++ +..||
T Consensus 225 ~~~~~~~------~~~~~~~~~~~skl~lVDLAGSEr~~~t~~~g~rl~E~~~IN~SL~aLg~vI~aL~~~~~--~~~hv 296 (344)
T 4a14_A 225 RGRAPSR------LPRPAPGQLLVSKFHFVDLAGSERVLKTGSTGERLKESIQINSSLLALGNVISALGDPQR--RGSHI 296 (344)
T ss_dssp EC------------------CEEEEEEEEEECCCCCCC--------------CCCSHHHHHHHHHHHHTCTTT--TTSCC
T ss_pred CCCCCCC------CCCCCCCCEEEEEEEEEECCCCHHHCCCCCCHHHHHHHEEECHHHHHHHHHHHHCCCCCC--CCCCC
T ss_conf 7889645------787664003214345775266431201688156546551325547766527876379101--58878
Q ss_pred CCCCCHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 678863225322038998502788632987667898898999999973
Q 001669 318 PYRDSKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYANRAR 365 (1034)
Q Consensus 318 pyrdSkLT~lLqdsLggns~t~~I~~vsp~~~~~~eTl~TL~~a~r~r 365 (1034)
||||||||+||+|+|||||+|+||+||||+..+++||++||+||+|||
T Consensus 297 PyRdSkLT~lLqdsLgGnskt~mI~~vsP~~~~~~ETl~TL~fA~rAk 344 (344)
T 4a14_A 297 PYRDSKITRILKDSLGGNAKTVMIACVSPSSSDFDETLNTLNYASRAQ 344 (344)
T ss_dssp CGGGCHHHHHTTTSSSTTSEEEEEEEECCBGGGHHHHHHHHHHHHHTC
T ss_pred CCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCC
T ss_conf 740246888767640897406999982787532567766530132059
Done!