BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001671
(1034 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ZW07|PUM1_ARATH Pumilio homolog 1 OS=Arabidopsis thaliana GN=APUM1 PE=1 SV=1
Length = 968
Score = 1023 bits (2645), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 575/1045 (55%), Positives = 713/1045 (68%), Gaps = 135/1045 (12%)
Query: 16 DYVEDLGKLIREQKQQQHLQEATQVNSASAADLEKELNIFRSGSAPPTVEGSLSSIDGL- 74
DY +++G L+ EQ+++Q A +LE+ELN+FRSGSAPPTV+GS+S+ GL
Sbjct: 22 DYEKEIGVLLGEQQRRQ----------VEADELERELNLFRSGSAPPTVDGSVSAAGGLF 71
Query: 75 ----------FKKLSDNKGGFLNEEELRADPAYVNYYYSNVNLNPRLPPPLLSKEDWRFT 124
F ++ G ++EE R DPAY++YYY+N+ LNPRLPPPL+S+ED R
Sbjct: 72 SGGGGAPFLEFGGVNKGNGFGGDDEEFRKDPAYLSYYYANMKLNPRLPPPLMSREDLRVA 131
Query: 125 QRLRGGGEV-GGIGDRRK--GNGSLFAVQPGFGGKEEENSGGSGGGGEWGGDGLIGLPGL 181
QRL+G V GG+GDRRK N SLF++ PGF G E +G S EW +GLIGLPGL
Sbjct: 132 QRLKGSNNVLGGVGDRRKVNDNRSLFSMPPGFEG---EKTGASAS--EWDANGLIGLPGL 186
Query: 182 GLGSRQKSIAEIIQDDMSHGAPVSRHPSRPPSRNAFEDAIESSETQFAHLHHDLSSIDGL 241
GLG +QKS A+I Q DM HG PV++ PSRP SRN F++ ++S
Sbjct: 187 GLGGKQKSFADIFQADMGHGHPVAQQPSRPASRNTFDENVDS------------------ 228
Query: 242 GSSANKQGMPSA-QSIGTSASHSYASALGASLSRSTTPDPQLMARAPSPRIPTAGVGRAS 300
N PSA Q IG + +SYA+ LG+SLSR+ TPDPQ +AR PSP + G GR S
Sbjct: 229 ----NNNLSPSASQGIGAPSPYSYAAVLGSSLSRNGTPDPQAIARVPSPCLTPIGSGRMS 284
Query: 301 SMDKRTVSGPLPLNGVSPSLKDSAEIVAALSGLNLSTD-GVADQENNSRSQNQHEIDD-R 358
S DKR S P NGV+ L +S+++V ALSGLNLS G+ D RSQ + +++ R
Sbjct: 285 SNDKRNTSNQSPFNGVTSGLNESSDLVNALSGLNLSCSVGLDD-----RSQAEQDVEKVR 339
Query: 359 HSLFNLQGDSRHMKQHPFLGRSESGHLLMHSASHSTKGSYPNMGKSGVGIDMNNASLMAD 418
+ +F LQG + QH F +S+ H
Sbjct: 340 NYMFGLQGGHNEVNQHEFPNKSDQAH---------------------------------- 365
Query: 419 GHKSALSSSNSYLKGPCTPTLNGGGNSPSHHQVMGNMNSAFSNFSLNGYSMNPSSPSMMG 478
K+ S NS L+GP NGG + +Q + + N+ LN Y++NP+ SMM
Sbjct: 366 --KATGSLRNSQLRGPHGSAYNGGVGLANPYQQLDS-----PNYCLNNYALNPAVASMMA 418
Query: 479 SPIGSGNLPPLYENAAAASAMAGNGLDARTLAS--LGLGPNVMAAAAELQSMNRLGNHT- 535
+ +G+ N P+Y+N SA+ +G+D+R + G N+ +E +++ R N
Sbjct: 419 NQLGNNNFAPMYDNV---SALGFSGMDSRHHGRGFVSSGQNL----SESRNLGRFSNRMM 471
Query: 536 -AGSALQAPLMDPLYLQYLRSNEYAAAQVASLNDPAMDI----GNSYMDLLGLQKAYLGA 590
G+ LQ+ ++DP+Y QY A + LNDP+MD G+SYMD+L LQ+AYLGA
Sbjct: 472 GGGAGLQSHMVDPMYNQY-------ADSLDLLNDPSMDRNFMGGSSYMDMLELQRAYLGA 524
Query: 591 LLSPQKSQYGVPYLNKSGSLNNN-LYGNPAFGLGMSYPGGPL----LPNSPVGSGSPVRH 645
QKSQYGVPY KSGS N++ YG+P FG MSYPG PL +PNS + SP+R
Sbjct: 525 ----QKSQYGVPY--KSGSPNSHSYYGSPTFGSNMSYPGSPLAHHGMPNSLMSPYSPMRR 578
Query: 646 GDRNMRFPSGMRNLSGGVMGPWHSEAGGSLDESFASSLLDEFKSNKTKCFELSEIAGHVV 705
+ NMRFPS RN SGG+MG WH +A S DE F SS+L+EFKSNKT+ FELSEIAGHVV
Sbjct: 579 DEVNMRFPSATRNYSGGLMGSWHMDA--SFDEGFGSSMLEEFKSNKTRGFELSEIAGHVV 636
Query: 706 EFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKFFEHGTASQV 765
EFS+DQYGSRFIQQKLETATT+EKNMV++EIMPQAL LMTDVFGNYVIQKFFEHG Q
Sbjct: 637 EFSSDQYGSRFIQQKLETATTDEKNMVYEEIMPQALVLMTDVFGNYVIQKFFEHGLPPQR 696
Query: 766 RELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKELDGHIMRCVRDQNGNHVI 825
RELA++L HVL LSLQMYGCRVIQKAIEVV+LDQ+ +MVKELDGH+MRCVRDQNGNHV+
Sbjct: 697 RELAEKLFDHVLPLSLQMYGCRVIQKAIEVVDLDQKIKMVKELDGHVMRCVRDQNGNHVV 756
Query: 826 QKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEHCHDEKTQSIMMDEILQSV 885
QKCIECVPE+ I+FI+ TF+ VVTLSTHPYGCRVIQRVLEHCHD TQS +M+EIL +V
Sbjct: 757 QKCIECVPEENIEFIISTFFGHVVTLSTHPYGCRVIQRVLEHCHDPDTQSKVMEEILSTV 816
Query: 886 CMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQIVQMSQQKFASNVIEKCLSFGTPAE 945
MLAQDQYGNYVVQHVLEHGKP ER+ IIK+L G+IVQMSQQKFASNV+EKCL+FG P E
Sbjct: 817 SMLAQDQYGNYVVQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASNVVEKCLTFGGPEE 876
Query: 946 RQALVNEMLGSIEENEPLQVMMKDQFANYVVQKVLETCDDQQLELILNRIKVHLNALKKY 1005
R+ LVNEMLG+ +ENEPLQ MMKDQFANYVVQKVLETCDDQQ ELIL RIKVHL ALKKY
Sbjct: 877 RELLVNEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQRELILTRIKVHLTALKKY 936
Query: 1006 TYGKHIVARVEKLVAAGERRISIMT 1030
TYGKH+VAR+EKLVAAGERR+++ +
Sbjct: 937 TYGKHVVARIEKLVAAGERRMALQS 961
>sp|Q9ZW06|PUM2_ARATH Pumilio homolog 2 OS=Arabidopsis thaliana GN=APUM2 PE=1 SV=1
Length = 972
Score = 1018 bits (2633), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 573/1048 (54%), Positives = 715/1048 (68%), Gaps = 137/1048 (13%)
Query: 16 DYVEDLGKLIREQKQQQHLQEATQVNSASAADLEKELNIFRSGSAPPTVEGSLSSIDGLF 75
DY +++G L+ EQ+++Q A +LE+ELN++RSGSAPPTV+GS+S+ GLF
Sbjct: 22 DYEKEIGVLLGEQQRRQ----------VEADELERELNLYRSGSAPPTVDGSVSAAGGLF 71
Query: 76 KKLSDNKGGFL-------------NEEELRADPAYVNYYYSNVNLNPRLPPPLLSKEDWR 122
FL ++EE R DPAY++YYY+N+ LNPRLPPPL+S+ED R
Sbjct: 72 SGGGGAP--FLEFGGGNKGNGFGGDDEEFRKDPAYLSYYYANMKLNPRLPPPLMSREDLR 129
Query: 123 FTQRLRGGGEV-GGIGDRRKGNG--SLFAVQPGFGGKEE---ENSGGSGGGGEWGGDGLI 176
QRL+G V GG+GDRRK N SLF++ PGF +++ E S EW +GLI
Sbjct: 130 VAQRLKGSSNVLGGVGDRRKVNDSQSLFSMPPGFDQRKQHEFEVEKTSASSSEWDANGLI 189
Query: 177 GLPGLGLGSRQKSIAEIIQDDMSHGAPVSRHPSRPPSRNAFEDAIESSETQFAHLHHDLS 236
GLPGLG+G +QKS A+I Q DM HG PV++ PSRP SRN F++ ++S ++LS
Sbjct: 190 GLPGLGIGGKQKSFADIFQADMGHGHPVTKQPSRPASRNTFDENVDSK--------NNLS 241
Query: 237 SIDGLGSSANKQGMPSA-QSIGTSASHSYASALGASLSRSTTPDPQLMARAPSPRIPTAG 295
PSA Q IG + +SYA+ LG+SLSR+ TPDPQ +AR PSP + G
Sbjct: 242 --------------PSASQGIGAPSPYSYAAVLGSSLSRNGTPDPQAIARVPSPCLTPIG 287
Query: 296 VGRASSMDKRTVSGPLPLNGVSPSLKDSAEIVAALSGLNLSTDGVADQENNSRSQNQHEI 355
GR SS DKR S P NG L +S+++V ALSG+NLS G D+ R Q + ++
Sbjct: 288 SGRVSSNDKRNTSNQSPFNG---GLNESSDLVNALSGMNLSGSGGLDE----RGQAEQDV 340
Query: 356 DD-RHSLFNLQGDSRHMKQHPFLGRSESGHLLMHSASHSTKGSYPNMGKSGVGIDMNNAS 414
+ R+ +F LQG + QH F +S+
Sbjct: 341 EKVRNYMFGLQGGHNEVNQHGFPNKSDQ-------------------------------- 368
Query: 415 LMADGHKSALSSSNSYLKGPCTPTLNGGGNSPSHHQVMGNMNSAFSNFSLNGYSMNPSSP 474
K+ NS L+G T N GG + +Q + + N+ LN Y +NP+
Sbjct: 369 ----AQKATGLLRNSQLRGAQGSTYNDGGGVATQYQHLDS-----PNYCLNNYGLNPAVA 419
Query: 475 SMMGSPIGSGNLPPLYENAAAASAMAGNGLDARTLAS--LGLGPNVMAAAAELQSMNRLG 532
SMM + +G+ N P+YENA+AASAM +G+D+R + G N+ +E +++ R
Sbjct: 420 SMMANQLGTNNYSPVYENASAASAMGFSGMDSRLHGGGYVSSGQNL----SESRNLGRFS 475
Query: 533 NHT--AGSALQAPLMDPLYLQYLRSNEYAAAQVASLNDPAMDI---GNSYMDLLGLQKAY 587
N G+ LQ+ + DP+Y QY A + LNDP+MD+ GNSYM++L LQ+AY
Sbjct: 476 NRMMGGGTGLQSHMADPMYHQY-------ADSLDLLNDPSMDVNFMGNSYMNMLELQRAY 528
Query: 588 LGALLSPQKSQYGVPYLNKSGSLNNNL-YGNPAFGLGMSYPGGP----LLPNSPVGSGSP 642
LGA QKSQYGVPY KSGS N++ YG+P FG SYPG P LLPNS V SP
Sbjct: 529 LGA----QKSQYGVPY--KSGSPNSHTDYGSPTFG---SYPGSPLAHHLLPNSLVSPCSP 579
Query: 643 VRHGDRNMRFPSGMRNLSGGVMGPWHSEAGGSLDESFASSLLDEFKSNKTKCFELSEIAG 702
+R G+ NMR+PS RN +GGVMG WH +A SLDE F SS+L+EFKSNKT+ FEL+EIAG
Sbjct: 580 MRRGEVNMRYPSATRNYAGGVMGSWHMDA--SLDEGFGSSMLEEFKSNKTRGFELAEIAG 637
Query: 703 HVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKFFEHGTA 762
HVVEFS+DQYGSRFIQQKLETAT++EKNMV++EIMP AL+LMTDVFGNYVIQKFFEHG
Sbjct: 638 HVVEFSSDQYGSRFIQQKLETATSDEKNMVYEEIMPHALALMTDVFGNYVIQKFFEHGLP 697
Query: 763 SQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKELDGHIMRCVRDQNGN 822
Q RELAD+L +VL LSLQMYGCRVIQKAIEVV+LDQ+ +MVKELDGH+MRCVRDQNGN
Sbjct: 698 PQRRELADKLFDNVLPLSLQMYGCRVIQKAIEVVDLDQKIKMVKELDGHVMRCVRDQNGN 757
Query: 823 HVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEHCHDEKTQSIMMDEIL 882
HV+QKCIECVPE+ I+FI+ TF+ VVTLSTHPYGCRVIQRVLEHCHD TQS +MDEI+
Sbjct: 758 HVVQKCIECVPEENIEFIISTFFGNVVTLSTHPYGCRVIQRVLEHCHDPDTQSKVMDEIM 817
Query: 883 QSVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQIVQMSQQKFASNVIEKCLSFGT 942
++ MLAQDQYGNYV+QHVLEHGKP ER+ IIK+L G+IVQMSQQKFASNV+EKCL+FG
Sbjct: 818 STISMLAQDQYGNYVIQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASNVVEKCLTFGG 877
Query: 943 PAERQALVNEMLGSIEENEPLQVMMKDQFANYVVQKVLETCDDQQLELILNRIKVHLNAL 1002
P ER+ LVNEMLG+ +ENEPLQ MMKDQFANYVVQKVLETCDDQQ ELIL RIKVHLNAL
Sbjct: 878 PEEREFLVNEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQRELILGRIKVHLNAL 937
Query: 1003 KKYTYGKHIVARVEKLVAAGERRISIMT 1030
KKYTYGKHIVARVEKLVAAGERR+++ +
Sbjct: 938 KKYTYGKHIVARVEKLVAAGERRMALQS 965
Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/118 (22%), Positives = 55/118 (46%), Gaps = 6/118 (5%)
Query: 697 LSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQA------LSLMTDVFGN 750
+ E+AG +V+ S ++ S +++ L EE+ + E++ ++M D F N
Sbjct: 849 IKELAGKIVQMSQQKFASNVVEKCLTFGGPEEREFLVNEMLGTTDENEPLQAMMKDQFAN 908
Query: 751 YVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKEL 808
YV+QK E Q + ++ H+ L YG ++ + ++V ++ ++ L
Sbjct: 909 YVVQKVLETCDDQQRELILGRIKVHLNALKKYTYGKHIVARVEKLVAAGERRMALQSL 966
>sp|Q9ZW02|PUM3_ARATH Pumilio homolog 3 OS=Arabidopsis thaliana GN=APUM3 PE=1 SV=1
Length = 964
Score = 987 bits (2551), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 564/1046 (53%), Positives = 706/1046 (67%), Gaps = 135/1046 (12%)
Query: 16 DYVEDLGKLIREQKQQQHLQEATQVNSASAADLEKELNIFRSGSAPPTVEGSLSSIDGL- 74
DY +++G L+ EQ+++Q A +LE+ELN++RSGSAPPTV+GSLS+ GL
Sbjct: 23 DYEKEIGVLLGEQQRRQ----------VEADELERELNLYRSGSAPPTVDGSLSAAGGLF 72
Query: 75 ----------FKKLSDNKGGFLNEEELRADPAYVNYYYSNVNLNPRLPPPLLSKEDWRFT 124
F ++ G ++EE R DPAY++YYY+N+ LNPRLPPPL+S+ED R
Sbjct: 73 SGGGGASFLEFGGVNKGNGFGGDDEEFRKDPAYLSYYYANMKLNPRLPPPLMSREDLRVA 132
Query: 125 QRLRGGGEV-GGIGDRRKGNGS--LFAVQPGFGGKEEENSGGSGGGGEWGGDGLIGLPGL 181
QRL+G V GG+GDRRK N S LF++ PGF E G S EW +GLIGL
Sbjct: 133 QRLKGSNNVLGGVGDRRKVNDSRSLFSMPPGF---EAGKPGASAS--EWDANGLIGL--- 184
Query: 182 GLGSRQKSIAEIIQDDMSHGAPVSRHPSRPPSRNAFEDAIESSETQFAHLHHDLSSIDGL 241
GLG +QKS A+I Q DM H PV + PSRP SRN F++ ++S +++LS
Sbjct: 185 GLGGKQKSFADIFQADMGH--PVVQQPSRPASRNTFDENVDS--------NNNLS----- 229
Query: 242 GSSANKQGMPSA-QSIGTSASHSYASALGASLSRSTTPDPQLMARAPSPRIPTAGVGRAS 300
PSA Q IG + + YA+ LG+SLSR+ TPDPQ +AR PSP + G GR S
Sbjct: 230 ---------PSASQGIGAPSPYCYAAVLGSSLSRNGTPDPQGIARVPSPCLTPIGSGRVS 280
Query: 301 SMDKRTVSGPLPLNGVSPSLKDSAEIVAALSGLNLSTDGVADQENNSRSQNQHEIDD-RH 359
S DKR S P NGV+ L +S+++V ALSGLNLS G D+ R Q + +++ R+
Sbjct: 281 SNDKRNTSNQSPFNGVTSGLNESSDLVNALSGLNLSGTGGLDE----RGQAEQDVEKVRN 336
Query: 360 SLFNLQGDSRHMKQHPFLGRSESGHLLMHSASHSTKGSYPNMGKSGVGIDMNNASLMADG 419
+F LQ + H F RS+ + +GS + SG G+
Sbjct: 337 YMFGLQDGHNEVNPHGFPNRSDQARGTASCRNSQMRGSQGSAYNSGSGV----------- 385
Query: 420 HKSALSSSNSYLKGPCTPTLNGGGNSPSHHQVMGNMNSAFSNFSLNGYSMNPSSPSMMGS 479
+N Y HH S N Y++NP+ SMM +
Sbjct: 386 -------ANPY----------------QHHD------------SPNYYALNPAVASMMAN 410
Query: 480 PIGSGNLPPLYENAAAASAMAGNGLDARTLAS--LGLGPNVMAAAAELQSMNRLGNHT-- 535
+G+ N P+YENA+A + + +D+R + G N+ +E +++ R+GN
Sbjct: 411 QLGTNNYSPMYENASAT--LGYSAMDSRLHGGSFVSSGQNL----SESRNIGRVGNRMME 464
Query: 536 AGSALQAPLMDPLYLQYLRSNEYAAAQVASLNDPAMD--IGNSYMDLLGLQKAYLGALLS 593
G+ + L DP+Y QY R +E A + LNDP+MD GNSYM++L +Q+AYLG+
Sbjct: 465 GGTGHPSHLADPMYHQYARFSENADS-FDLLNDPSMDRNYGNSYMNMLEIQRAYLGS--- 520
Query: 594 PQKSQYGVPYLNKSGSLNNN-LYGNPAFGLGMSYPGGPL----LPNSPVGSGSPVRHGDR 648
QKSQYG+PY KSGS N++ YG+P FG MSYPG PL +PNS + SP+R G+
Sbjct: 521 -QKSQYGLPY--KSGSPNSHSYYGSPTFGSNMSYPGSPLAHHGMPNSLMSPYSPMRRGEV 577
Query: 649 NMRFPSGMRNLSGGVMGPWHSEAGGSLDESFASSLLDEFKSNKTKCFELSEIAGHVVEFS 708
NMR+P+ RN +GGVMG WH +A SLDE F SS+L+EFKSNKT+ FELSEIAGHVVEFS
Sbjct: 578 NMRYPAATRNYTGGVMGSWHMDA--SLDEGFGSSMLEEFKSNKTRGFELSEIAGHVVEFS 635
Query: 709 ADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKFFEHGTASQVREL 768
+DQYGSRFIQQKLETATT+EKNMV++EIMP+AL+LMTDVFGNYVIQKFFEHG Q REL
Sbjct: 636 SDQYGSRFIQQKLETATTDEKNMVYEEIMPKALALMTDVFGNYVIQKFFEHGLPPQRREL 695
Query: 769 ADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKELDGHIMRCVRDQNGNHVIQKC 828
++L +VL LSLQMYGCRVIQKAIEVV+LDQ+ QMVKELDGH+MRCVRDQNGNHV+QKC
Sbjct: 696 GEKLIDNVLPLSLQMYGCRVIQKAIEVVDLDQKIQMVKELDGHVMRCVRDQNGNHVVQKC 755
Query: 829 IECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEHCHDEKTQSIMMDEILQSVCML 888
IECVPE+ I+FI+ TF+ VVTLSTHPYGCRVIQRVLEHCH+ TQS +M+EIL +V ML
Sbjct: 756 IECVPEENIEFIISTFFGHVVTLSTHPYGCRVIQRVLEHCHNPDTQSKVMEEILSTVSML 815
Query: 889 AQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQIVQMSQQKFASNVIEKCLSFGTPAERQA 948
QDQYGNYVVQHVLEHGKP ER+ IIK+L G+IVQMSQQKFASNV+EKCL+FG P ER+
Sbjct: 816 TQDQYGNYVVQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASNVVEKCLTFGGPEEREL 875
Query: 949 LVNEMLGSIEENEPLQVMMKDQFANYVVQKVLETCDDQQLELILNRIKVHLNALKKYTYG 1008
LVNEMLG+ +ENEPLQ MMKDQFANYVVQKVLETCDDQQ ELIL RIKVHLNALKKYTYG
Sbjct: 876 LVNEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQRELILTRIKVHLNALKKYTYG 935
Query: 1009 KHIVARVEKLVAAGERRISIMT-PHP 1033
KHIVARVEKLVAAGERR+++ + P P
Sbjct: 936 KHIVARVEKLVAAGERRMALQSLPQP 961
>sp|Q9SS47|PUM4_ARATH Pumilio homolog 4 OS=Arabidopsis thaliana GN=APUM4 PE=1 SV=2
Length = 1003
Score = 735 bits (1898), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/1049 (43%), Positives = 613/1049 (58%), Gaps = 128/1049 (12%)
Query: 26 REQKQQQHLQEATQVNSASAADLEKELNIFRSGSAPPTVEGSLSSIDGLFKK-------- 77
R Q++ + L + + + + E+++++ RSGSAPPTVEG L ++D +
Sbjct: 27 RFQRELESLLQQHRNQQSFGRERERDIDVHRSGSAPPTVEGLLRAMDNQYLNNNNSDHRD 86
Query: 78 -------LSDNKGGFLNEEELRADPAYVNYYYSNVNLNPRLPPPLLSKEDWRFTQRLRGG 130
+ N L+++ELR P Y++YYYSN + NPRLPPPLLS+EDWR QR
Sbjct: 87 VGNISSITTSNGVELLSDDELRWHPEYLSYYYSNEHSNPRLPPPLLSREDWRVAQRFHNS 146
Query: 131 GEVGG-IGDRRK------GNGSLFAVQPGFGGKEEENS-----GGSGGGG-------EWG 171
V +G+ RK + SLF+VQPG ++ EN G + G
Sbjct: 147 ESVFDPVGEWRKKTVEVDNSSSLFSVQPGVPVEQAENDLMELRNAVAQGRSQKVQRLDQG 206
Query: 172 GDGLIGLPGL-GLGSRQKSIAEIIQDDMSHGAPVSRHPSRPPSRNAFEDAIESSETQFAH 230
+ LIGL G GLG R+KS A+I+Q+ + A + SRP S N F D
Sbjct: 207 REDLIGLSGYSGLGPRRKSFADILQEGLERDAALGSQLSRPASCNTFRDM---------- 256
Query: 231 LHHDLSSIDGLGSSANKQGMPSAQSIGTSASHSYASALGASLS----RSTTPDPQLMARA 286
D + + + + S+ ++A +S + LG+++S R+ TPD L+ R+
Sbjct: 257 --KDAAVLSNFSAGGFDSPLAFHDSLHSTAKNSPNTMLGSTMSSPVPRNRTPDSHLVGRS 314
Query: 287 PSPRIPTAGVGRASSMDKRTVSGPLPLNGVSPSLKDSAEIVAALSGLNLSTDGVADQENN 346
+ +P G R ++K+ G N S + +A++ LS LN+S +EN+
Sbjct: 315 TASGLPPIGT-RVGPVEKKNTFGTAIQNCESYT---AADVADTLSRLNMSEMSQV-KENH 369
Query: 347 SRSQNQHEIDDRHSLFNL--QGDSRHMKQHPFLGRSESGHLLMHSASHSTKGSYPNMGKS 404
+SQ Q E++++ + G + ++Q +E+ L + G ++G S
Sbjct: 370 MQSQLQVELENQSDVMRYIPNGHKKALRQQ---NTAETKDHLFSANYGGMSGYGASLGAS 426
Query: 405 GVGIDMNNASLMADGHKSALSSSNSYLKGPCTPTLNGGGNSPSHHQVMGNMNSAFSNFSL 464
VG S+ + P + + S S H +G++ S+ ++
Sbjct: 427 TVG-------------------SHGQVNIPKRTSSSASLYSTSDHSRLGSV--GLSDVNI 465
Query: 465 NGYSMNPSSPSMMGSPIGSGNLPPLYEN-AAAASAMAGNGLDARTLASLGLGPNVMAAAA 523
++N + S G + L L E+ +A S + G+G
Sbjct: 466 RNGNINGTDFSTAGGYMAKNKLNSLAEHYSAEGSHLTGDG-------------------- 505
Query: 524 ELQSMNRLGNHTAGSALQAPLMDPLYLQYLRSNEYAAAQVASLNDPAMDIGNSYMDLLG- 582
+ QS+NRL N A S L +P+MDP Y QYL + AA + D ++ I N++ G
Sbjct: 506 DRQSLNRLINQVA-SELHSPVMDPHYSQYLHTASSTAAPI----DHSL-IRNNFGTSNGD 559
Query: 583 LQKAYLGALLSPQKSQYGVPYLNKSGSLNNNLYGNPAFGLGMSYPGGPLLPNSPVGSGSP 642
YL LL+ + Q G LN + N+ + +P++ LG Y G L S S
Sbjct: 560 TANEYLAMLLAQNRQQLG--NLNAA---NSRFFESPSYDLGNMYLGNHL------PSPSK 608
Query: 643 VRHGDRNMRF---PSGMRNLSGGVMGPWHSEAGGSLDESFASSLLDEFKSNKTKCFELSE 699
+NMR S M+ GG+ G H + G + + +SLL+ FK+NKT+ ELSE
Sbjct: 609 NSRNFQNMRMSQSASMMKVPFGGLQGSSHVDIGSTAE----ASLLEGFKNNKTRSLELSE 664
Query: 700 IAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKFFEH 759
I GHV+EFS DQYGSRFIQQKLETAT EEKN +F EI+P +LMTDVFGNYVIQKFFEH
Sbjct: 665 IVGHVIEFSMDQYGSRFIQQKLETATDEEKNAIFPEILPYGRTLMTDVFGNYVIQKFFEH 724
Query: 760 GTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKELDGHIMRCVRDQ 819
GT Q +ELA+Q+TGHVL LSLQMYGCRVIQKA+EVVEL+QQ +MVKELDG +M+CV DQ
Sbjct: 725 GTTKQRKELAEQVTGHVLALSLQMYGCRVIQKALEVVELEQQARMVKELDGSVMKCVHDQ 784
Query: 820 NGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEHCHDEKTQSIMMD 879
NGNHVIQKCIE +P+D IQFI+ +FY +V+ LSTHPYGCRVIQRVLEH D +TQ I+M+
Sbjct: 785 NGNHVIQKCIERLPQDWIQFIISSFYGKVLALSTHPYGCRVIQRVLEHIDDIETQRIIME 844
Query: 880 EILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQIVQMSQQKFASNVIEKCLS 939
EI+ SVC LAQDQYGNYV+QH+++HGKPHERS II KL GQIV+MSQQKFASNV+EKCL+
Sbjct: 845 EIMDSVCTLAQDQYGNYVIQHIIQHGKPHERSEIINKLAGQIVKMSQQKFASNVVEKCLT 904
Query: 940 FGTPAERQALVNEMLGSIEENEPLQVMMKDQFANYVVQKVLETCDDQQLELILNRIKVHL 999
FG P ERQ LVNEMLG +ENEPLQ MMKD F NYVVQKVLETCDDQ L LIL+RIKVHL
Sbjct: 905 FGGPEERQVLVNEMLGYTDENEPLQAMMKDPFGNYVVQKVLETCDDQSLALILSRIKVHL 964
Query: 1000 NALKKYTYGKHIVARVEKLVAAGERRISI 1028
NALK+YTYGKHIVARVEKL+ GERRI +
Sbjct: 965 NALKRYTYGKHIVARVEKLITTGERRIGL 993
>sp|Q9LJX4|PUM5_ARATH Pumilio homolog 5 OS=Arabidopsis thaliana GN=APUM5 PE=1 SV=2
Length = 961
Score = 493 bits (1268), Expect = e-138, Method: Compositional matrix adjust.
Identities = 257/487 (52%), Positives = 322/487 (66%), Gaps = 21/487 (4%)
Query: 544 LMDPLYLQYLRSNEYAAAQVASLNDPAMDIGNSYMDLLGLQKAYLG---ALLSPQKSQYG 600
L+DP LQY + AQV + P +S+ Y+ L SP YG
Sbjct: 470 LVDPFQLQY-----FQQAQVDAYAPPFQSSTDSFGQKDQQAVGYMANHEPLNSPLSPGYG 524
Query: 601 VPYLNKSGSLNNNLYGNPAFGLGMSYPGGPL----LPNSPVGSGSPVRHGDRN-MRF-PS 654
L + N P + YPG PL +P+SPVG G G R+ R+
Sbjct: 525 ---LQSPRHMGNYFAVPPGVRVMPQYPGSPLASPVMPSSPVG-GMMSHFGRRSETRYHQQ 580
Query: 655 GMRNLSGGVMGPWHSEAGGS---LDESFASSLLDEFKSNKTKCFELSEIAGHVVEFSADQ 711
G +G G W GG+ +D+ S LDE KS + ELS+IAG VVEFS DQ
Sbjct: 581 GPSRNTGIYPGGWQGNRGGASSIVDDLKRHSFLDELKSPNARKLELSDIAGRVVEFSVDQ 640
Query: 712 YGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKFFEHGTASQVRELADQ 771
+GSRFIQQKLE + EEK VF E++PQA LMTDVFGNYVIQKF EHGT +Q EL Q
Sbjct: 641 HGSRFIQQKLEHCSDEEKASVFSEVLPQASKLMTDVFGNYVIQKFIEHGTPAQREELVKQ 700
Query: 772 LTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKELDGHIMRCVRDQNGNHVIQKCIEC 831
L G +++LSLQMYGCRVIQKA+EV+++DQ+T++++ELDG++++CVRDQNGNHVIQKCIE
Sbjct: 701 LAGQMVSLSLQMYGCRVIQKALEVIDVDQKTELIRELDGNVLKCVRDQNGNHVIQKCIES 760
Query: 832 VPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEHCHDEKTQSIMMDEILQSVCMLAQD 891
+P I F++ F QV TLSTHPYGCRVIQR+LEHC D++ ++DEIL+S LA D
Sbjct: 761 MPAGRIGFVIAAFRGQVATLSTHPYGCRVIQRILEHCSDDEETHCIIDEILESAFALAHD 820
Query: 892 QYGNYVVQHVLEHGKPHERSAIIKKLTGQIVQMSQQKFASNVIEKCLSFGTPAERQALVN 951
QYGNYV QHVLE GKP ER II+KLTG +VQMSQ K+ASNV+EKCL ER+ L+
Sbjct: 821 QYGNYVTQHVLERGKPDERRQIIEKLTGNVVQMSQHKYASNVVEKCLEHADSTEREFLIE 880
Query: 952 EMLGSIEENEPLQVMMKDQFANYVVQKVLETCDDQQLELILNRIKVHLNALKKYTYGKHI 1011
E++G EE+ L MMKDQFANYVVQKVLE DQQ E+++ R+K+HL +L+KYTYGKHI
Sbjct: 881 EIMGKSEEDNHLLAMMKDQFANYVVQKVLEISKDQQREILVQRMKIHLQSLRKYTYGKHI 940
Query: 1012 VARVEKL 1018
VAR E+L
Sbjct: 941 VARFEQL 947
Score = 107 bits (267), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 130/264 (49%), Gaps = 11/264 (4%)
Query: 767 ELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKELDGHIMRCVRDQNGNHVIQ 826
EL+D + G V+ S+ +G R IQ+ +E +++ + E+ + + D GN+VIQ
Sbjct: 625 ELSD-IAGRVVEFSVDQHGSRFIQQKLEHCSDEEKASVFSEVLPQASKLMTDVFGNYVIQ 683
Query: 827 KCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEHCH-DEKTQSIMMDEILQSV 885
K IE + +V Q+V+LS YGCRVIQ+ LE D+KT+ ++ E+ +V
Sbjct: 684 KFIEHGTPAQREELVKQLAGQMVSLSLQMYGCRVIQKALEVIDVDQKTE--LIRELDGNV 741
Query: 886 CMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQIVQMSQQKFASNVIEKCLSFGTPAE 945
+DQ GN+V+Q +E +I GQ+ +S + VI++ L + E
Sbjct: 742 LKCVRDQNGNHVIQKCIESMPAGRIGFVIAAFRGQVATLSTHPYGCRVIQRILEHCSDDE 801
Query: 946 R-QALVNEMLGSIEENEPLQVMMKDQFANYVVQKVLETCDDQQLELILNRIKVHLNALKK 1004
+++E+L E + DQ+ NYV Q VLE + I+ ++ ++ + +
Sbjct: 802 ETHCIIDEIL------ESAFALAHDQYGNYVTQHVLERGKPDERRQIIEKLTGNVVQMSQ 855
Query: 1005 YTYGKHIVARVEKLVAAGERRISI 1028
+ Y ++V + + + ER I
Sbjct: 856 HKYASNVVEKCLEHADSTEREFLI 879
Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 78/152 (51%), Gaps = 17/152 (11%)
Query: 56 RSGSAPPTVEGSLSSIDGLFKK--------LSDNKGGFLNEEELRADPAYVNYYYSNVNL 107
RS SAPP++EGS +++ L K+ LS + +EEE+R+DPAYV YY SN+NL
Sbjct: 59 RSESAPPSMEGSFAALRNLLKQQEGSSSEVLSRAIENYDSEEEIRSDPAYVAYYLSNINL 118
Query: 108 NPRLPPPLLSKEDWRFTQRLRGGGEVGGIGDRRKG-NGSLFAVQPGFGGKEEENSGGSGG 166
NPRLPPPL+S+E+ + + G SL + + EE +
Sbjct: 119 NPRLPPPLISRENQHLLRHFGDNNQSPTTSWDNMGIRSSLHSSRTALSTHREEPEDEASS 178
Query: 167 GGEWGGDGLIGLPGLGLGSRQKSIAEIIQDDM 198
G + L G R+KSIA++IQ+D
Sbjct: 179 GEQQSYASLAG--------RRKSIADMIQEDF 202
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/122 (21%), Positives = 59/122 (48%), Gaps = 6/122 (4%)
Query: 903 EHGKPHERSAIIKKLTGQIVQMSQQKFASNVIEKCLSFGTPAERQALVNEMLGSIEENEP 962
E P+ R + + G++V+ S + S I++ L + E+ ++ +E+L +
Sbjct: 615 ELKSPNARKLELSDIAGRVVEFSVDQHGSRFIQQKLEHCSDEEKASVFSEVLPQASK--- 671
Query: 963 LQVMMKDQFANYVVQKVLETCDDQQLELILNRIKVHLNALKKYTYGKHIVARVEKLVAAG 1022
+M D F NYV+QK +E Q E ++ ++ + +L YG ++ + +++
Sbjct: 672 ---LMTDVFGNYVIQKFIEHGTPAQREELVKQLAGQMVSLSLQMYGCRVIQKALEVIDVD 728
Query: 1023 ER 1024
++
Sbjct: 729 QK 730
>sp|Q9C5E7|PUM6_ARATH Pumilio homolog 6, chloroplastic OS=Arabidopsis thaliana GN=APUM6
PE=1 SV=1
Length = 861
Score = 442 bits (1138), Expect = e-123, Method: Compositional matrix adjust.
Identities = 202/336 (60%), Positives = 257/336 (76%)
Query: 682 SLLDEFKSNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQAL 741
+ L+E KS K + F+LS+I GH+VEFSADQ+GSRFIQQKLE EEK VF+EI+P A
Sbjct: 515 NFLEELKSGKGRRFDLSDITGHIVEFSADQHGSRFIQQKLENCKPEEKAAVFREILPHAC 574
Query: 742 SLMTDVFGNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQ 801
LMTDVFGNYVIQKFFE+G ++Q +ELADQL G ++ LSLQMYGCRVIQKA++V+E DQ+
Sbjct: 575 KLMTDVFGNYVIQKFFEYGNSTQRKELADQLMGQIVPLSLQMYGCRVIQKALDVIEPDQR 634
Query: 802 TQMVKELDGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVI 861
++ +ELDG +MRCVRDQNGNHVIQKCIE +P D + F++ F QV +LS HPYGCRVI
Sbjct: 635 VRLARELDGQVMRCVRDQNGNHVIQKCIENIPADKVGFMLYAFRGQVSSLSMHPYGCRVI 694
Query: 862 QRVLEHCHDEKTQSIMMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQI 921
QR+LE C + + +EIL+SVC+L++DQYGNYV QHVLE G ER I +KL+G I
Sbjct: 695 QRLLERCSHDHQCRFITEEILESVCVLSKDQYGNYVTQHVLEKGTSEERERIGRKLSGHI 754
Query: 922 VQMSQQKFASNVIEKCLSFGTPAERQALVNEMLGSIEENEPLQVMMKDQFANYVVQKVLE 981
VQ+S KFASNVIEKCL +G ER ++ E+ G E L +MMKDQ+ NYVVQK+ E
Sbjct: 755 VQLSLHKFASNVIEKCLEYGGRVERDLIIKEIAGPDESYNSLLMMMKDQYGNYVVQKIFE 814
Query: 982 TCDDQQLELILNRIKVHLNALKKYTYGKHIVARVEK 1017
TC Q + +R+++H +ALKKYTYGKHIV+R+E+
Sbjct: 815 TCTADQRLTLFSRVRMHASALKKYTYGKHIVSRLEQ 850
Score = 107 bits (266), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 130/263 (49%), Gaps = 9/263 (3%)
Query: 767 ELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKELDGHIMRCVRDQNGNHVIQ 826
+L+D +TGH++ S +G R IQ+ +E + +++ + +E+ H + + D GN+VIQ
Sbjct: 529 DLSD-ITGHIVEFSADQHGSRFIQQKLENCKPEEKAAVFREILPHACKLMTDVFGNYVIQ 587
Query: 827 KCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEHCH-DEKTQSIMMDEILQSV 885
K E + + Q+V LS YGCRVIQ+ L+ D++ + + E+ V
Sbjct: 588 KFFEYGNSTQRKELADQLMGQIVPLSLQMYGCRVIQKALDVIEPDQRVR--LARELDGQV 645
Query: 886 CMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQIVQMSQQKFASNVIEKCLSFGTPAE 945
+DQ GN+V+Q +E+ + ++ GQ+ +S + VI++ L +
Sbjct: 646 MRCVRDQNGNHVIQKCIENIPADKVGFMLYAFRGQVSSLSMHPYGCRVIQRLLERCSHDH 705
Query: 946 RQALVNEMLGSIEENEPLQVMMKDQFANYVVQKVLETCDDQQLELILNRIKVHLNALKKY 1005
+ + E E E + V+ KDQ+ NYV Q VLE ++ E I ++ H+ L +
Sbjct: 706 QCRFITE-----EILESVCVLSKDQYGNYVTQHVLEKGTSEERERIGRKLSGHIVQLSLH 760
Query: 1006 TYGKHIVARVEKLVAAGERRISI 1028
+ +++ + + ER + I
Sbjct: 761 KFASNVIEKCLEYGGRVERDLII 783
>sp|P25822|PUM_DROME Maternal protein pumilio OS=Drosophila melanogaster GN=pum PE=1 SV=2
Length = 1533
Score = 420 bits (1079), Expect = e-116, Method: Compositional matrix adjust.
Identities = 196/350 (56%), Positives = 260/350 (74%), Gaps = 3/350 (0%)
Query: 681 SSLLDEFKSNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQA 740
S LL++F++ + +L ++A H+VEFS DQ+GSRFIQQKLE AT EK MVF EI+ A
Sbjct: 1093 SRLLEDFRNQRYPNLQLRDLANHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAA 1152
Query: 741 LSLMTDVFGNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQ 800
SLMTDVFGNYVIQKFFE GT Q L Q+ GHVL L+LQMYGCRVIQKA+E + +Q
Sbjct: 1153 YSLMTDVFGNYVIQKFFEFGTPEQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQ 1212
Query: 801 QTQMVKELDGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRV 860
Q ++V ELDGH+++CV+DQNGNHV+QKCIECV A+QFI+ F QV +LSTHPYGCRV
Sbjct: 1213 QQEIVHELDGHVLKCVKDQNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRV 1272
Query: 861 IQRVLEHCHDEKTQSIMMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQ 920
IQR+LEHC E+T I +DE+ + L QDQYGNYV+QHVLEHGK ++S +I + G+
Sbjct: 1273 IQRILEHCTAEQTTPI-LDELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGK 1331
Query: 921 IVQMSQQKFASNVIEKCLSFGTPAERQALVNEMLGSIEENEPLQVMMKDQFANYVVQKVL 980
++ +SQ KFASNV+EKC++ T ER L++E+ + +N L VMMKDQ+ANYVVQK++
Sbjct: 1332 VLVLSQHKFASNVVEKCVTHATRGERTGLIDEVC-TFNDNA-LHVMMKDQYANYVVQKMI 1389
Query: 981 ETCDDQQLELILNRIKVHLNALKKYTYGKHIVARVEKLVAAGERRISIMT 1030
+ + QL+ ++ +I+ H+ AL+KYTYGKHI A++EK I++ T
Sbjct: 1390 DVSEPTQLKKLMTKIRPHMAALRKYTYGKHINAKLEKYYMKITNPITVGT 1439
>sp|Q8TB72|PUM2_HUMAN Pumilio homolog 2 OS=Homo sapiens GN=PUM2 PE=1 SV=2
Length = 1066
Score = 417 bits (1073), Expect = e-115, Method: Compositional matrix adjust.
Identities = 191/340 (56%), Positives = 260/340 (76%), Gaps = 4/340 (1%)
Query: 681 SSLLDEFKSNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQA 740
S LL++F++N+ +L ++ GH+VEFS DQ+GSRFIQQKLE AT E+ MVF EI+ A
Sbjct: 708 SRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAA 767
Query: 741 LSLMTDVFGNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQ 800
LMTDVFGNYVIQKFFE G+ Q LA ++ GHVL L+LQMYGCRVIQKA+E + DQ
Sbjct: 768 YQLMTDVFGNYVIQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQ 827
Query: 801 Q--TQMVKELDGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGC 858
Q ++MVKELDGH+++CV+DQNGNHV+QKCIECV ++QFI+ F QV LSTHPYGC
Sbjct: 828 QVISEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGC 887
Query: 859 RVIQRVLEHCHDEKTQSIMMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLT 918
RVIQR+LEHC E+T I ++E+ Q L QDQYGNYV+QHVLEHG+P ++S I+ ++
Sbjct: 888 RVIQRILEHCTAEQTLPI-LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIR 946
Query: 919 GQIVQMSQQKFASNVIEKCLSFGTPAERQALVNEMLGSIE-ENEPLQVMMKDQFANYVVQ 977
G+++ +SQ KFASNV+EKC++ + AER L++E+ + + L MMKDQ+ANYVVQ
Sbjct: 947 GKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQ 1006
Query: 978 KVLETCDDQQLELILNRIKVHLNALKKYTYGKHIVARVEK 1017
K+++ + Q ++I+++I+ H+ L+KYTYGKHI+A++EK
Sbjct: 1007 KMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEK 1046
Score = 117 bits (292), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 137/295 (46%), Gaps = 18/295 (6%)
Query: 735 EIMPQALSLMTDVFGNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIE 794
+IMP S + + F N Q+R+L GH++ S +G R IQ+ +E
Sbjct: 701 DIMPSGRSRLLEDFRNNRFPNL-------QLRDL----IGHIVEFSQDQHGSRFIQQKLE 749
Query: 795 VVELDQQTQMVKELDGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTH 854
++ + E+ + + D GN+VIQK E D + V+ L+
Sbjct: 750 RATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALATRIRGHVLPLALQ 809
Query: 855 PYGCRVIQRVLEHCH-DEKTQSIMMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAI 913
YGCRVIQ+ LE D++ S M+ E+ V +DQ GN+VVQ +E +P I
Sbjct: 810 MYGCRVIQKALESISSDQQVISEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFI 869
Query: 914 IKKLTGQIVQMSQQKFASNVIEKCLSFGTPAERQALVNEMLGSIEENEPLQVMMKDQFAN 973
I GQ+ +S + VI++ L T + ++ E+ E+ +++DQ+ N
Sbjct: 870 IDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQ------LVQDQYGN 923
Query: 974 YVVQKVLETCDDQQLELILNRIKVHLNALKKYTYGKHIVARVEKLVAAGERRISI 1028
YV+Q VLE + I++ I+ + AL ++ + ++V + + ER + I
Sbjct: 924 YVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLI 978
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 64/118 (54%), Gaps = 8/118 (6%)
Query: 914 IKKLTGQIVQMSQQKFASNVIEKCLSFGTPAERQALVNEMLGSIEENEPLQVMMKDQFAN 973
++ L G IV+ SQ + S I++ L TPAERQ + NE+L + + +M D F N
Sbjct: 724 LRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQ------LMTDVFGN 777
Query: 974 YVVQKVLETCD-DQQLELILNRIKVHLNALKKYTYGKHIVARVEKLVAAGERRISIMT 1030
YV+QK E DQ+L L RI+ H+ L YG ++ + + +++ ++ IS M
Sbjct: 778 YVIQKFFEFGSLDQKLALA-TRIRGHVLPLALQMYGCRVIQKALESISSDQQVISEMV 834
>sp|Q80U58|PUM2_MOUSE Pumilio homolog 2 OS=Mus musculus GN=Pum2 PE=1 SV=2
Length = 1066
Score = 417 bits (1071), Expect = e-115, Method: Compositional matrix adjust.
Identities = 190/340 (55%), Positives = 260/340 (76%), Gaps = 4/340 (1%)
Query: 681 SSLLDEFKSNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQA 740
S LL++F++N+ +L ++ GH+VEFS DQ+GSRFIQQKLE AT E+ +VF EI+ A
Sbjct: 708 SRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQIVFNEILQAA 767
Query: 741 LSLMTDVFGNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQ 800
LMTDVFGNYVIQKFFE G+ Q LA ++ GHVL L+LQMYGCRVIQKA+E + DQ
Sbjct: 768 YQLMTDVFGNYVIQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQ 827
Query: 801 Q--TQMVKELDGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGC 858
Q ++MVKELDGH+++CV+DQNGNHV+QKCIECV ++QFI+ F QV LSTHPYGC
Sbjct: 828 QVISEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGC 887
Query: 859 RVIQRVLEHCHDEKTQSIMMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLT 918
RVIQR+LEHC E+T I ++E+ Q L QDQYGNYV+QHVLEHG+P ++S I+ ++
Sbjct: 888 RVIQRILEHCTAEQTLPI-LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIR 946
Query: 919 GQIVQMSQQKFASNVIEKCLSFGTPAERQALVNEMLGSIE-ENEPLQVMMKDQFANYVVQ 977
G+++ +SQ KFASNV+EKC++ + AER L++E+ + + L MMKDQ+ANYVVQ
Sbjct: 947 GKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQ 1006
Query: 978 KVLETCDDQQLELILNRIKVHLNALKKYTYGKHIVARVEK 1017
K+++ + Q ++I+++I+ H+ L+KYTYGKHI+A++EK
Sbjct: 1007 KMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEK 1046
Score = 116 bits (291), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 137/295 (46%), Gaps = 18/295 (6%)
Query: 735 EIMPQALSLMTDVFGNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIE 794
+IMP S + + F N Q+R+L GH++ S +G R IQ+ +E
Sbjct: 701 DIMPSGRSRLLEDFRNNRFPNL-------QLRDL----IGHIVEFSQDQHGSRFIQQKLE 749
Query: 795 VVELDQQTQMVKELDGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTH 854
++ + E+ + + D GN+VIQK E D + V+ L+
Sbjct: 750 RATPAERQIVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALATRIRGHVLPLALQ 809
Query: 855 PYGCRVIQRVLEHCH-DEKTQSIMMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAI 913
YGCRVIQ+ LE D++ S M+ E+ V +DQ GN+VVQ +E +P I
Sbjct: 810 MYGCRVIQKALESISSDQQVISEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFI 869
Query: 914 IKKLTGQIVQMSQQKFASNVIEKCLSFGTPAERQALVNEMLGSIEENEPLQVMMKDQFAN 973
I GQ+ +S + VI++ L T + ++ E+ E+ +++DQ+ N
Sbjct: 870 IDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQ------LVQDQYGN 923
Query: 974 YVVQKVLETCDDQQLELILNRIKVHLNALKKYTYGKHIVARVEKLVAAGERRISI 1028
YV+Q VLE + I++ I+ + AL ++ + ++V + + ER + I
Sbjct: 924 YVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLI 978
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 64/118 (54%), Gaps = 8/118 (6%)
Query: 914 IKKLTGQIVQMSQQKFASNVIEKCLSFGTPAERQALVNEMLGSIEENEPLQVMMKDQFAN 973
++ L G IV+ SQ + S I++ L TPAERQ + NE+L + + +M D F N
Sbjct: 724 LRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQIVFNEILQAAYQ------LMTDVFGN 777
Query: 974 YVVQKVLETCD-DQQLELILNRIKVHLNALKKYTYGKHIVARVEKLVAAGERRISIMT 1030
YV+QK E DQ+L L RI+ H+ L YG ++ + + +++ ++ IS M
Sbjct: 778 YVIQKFFEFGSLDQKLALA-TRIRGHVLPLALQMYGCRVIQKALESISSDQQVISEMV 834
>sp|Q14671|PUM1_HUMAN Pumilio homolog 1 OS=Homo sapiens GN=PUM1 PE=1 SV=3
Length = 1186
Score = 414 bits (1064), Expect = e-114, Method: Compositional matrix adjust.
Identities = 186/338 (55%), Positives = 258/338 (76%), Gaps = 2/338 (0%)
Query: 681 SSLLDEFKSNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQA 740
S LL++F++N+ +L EIAGH++EFS DQ+GSRFIQ KLE AT E+ +VF EI+ A
Sbjct: 830 SRLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAA 889
Query: 741 LSLMTDVFGNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQ 800
LM DVFGNYVIQKFFE G+ Q LA+++ GHVL+L+LQMYGCRVIQKA+E + DQ
Sbjct: 890 YQLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQ 949
Query: 801 QTQMVKELDGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRV 860
Q +MV+ELDGH+++CV+DQNGNHV+QKCIECV ++QFI+ F QV LSTHPYGCRV
Sbjct: 950 QNEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRV 1009
Query: 861 IQRVLEHCHDEKTQSIMMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQ 920
IQR+LEHC ++T I ++E+ Q L QDQYGNYV+QHVLEHG+P ++S I+ ++ G
Sbjct: 1010 IQRILEHCLPDQTLPI-LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGN 1068
Query: 921 IVQMSQQKFASNVIEKCLSFGTPAERQALVNEMLGSIE-ENEPLQVMMKDQFANYVVQKV 979
++ +SQ KFASNV+EKC++ + ER L++E+ + + L MMKDQ+ANYVVQK+
Sbjct: 1069 VLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKM 1128
Query: 980 LETCDDQQLELILNRIKVHLNALKKYTYGKHIVARVEK 1017
++ + Q ++++++I+ H+ L+KYTYGKHI+A++EK
Sbjct: 1129 IDVAEPGQRKIVMHKIRPHIATLRKYTYGKHILAKLEK 1166
Score = 111 bits (277), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 137/294 (46%), Gaps = 18/294 (6%)
Query: 735 EIMPQALSLMTDVFGNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIE 794
++MP S + + F N Q+RE+A GH++ S +G R IQ +E
Sbjct: 823 DVMPSGRSRLLEDFRNNRYPNL-------QLREIA----GHIMEFSQDQHGSRFIQLKLE 871
Query: 795 VVELDQQTQMVKELDGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTH 854
++ + E+ + + D GN+VIQK E + + V++L+
Sbjct: 872 RATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQ 931
Query: 855 PYGCRVIQRVLEHCHDEKTQSIMMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAII 914
YGCRVIQ+ LE ++ Q+ M+ E+ V +DQ GN+VVQ +E +P II
Sbjct: 932 MYGCRVIQKALEFIPSDQ-QNEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII 990
Query: 915 KKLTGQIVQMSQQKFASNVIEKCLSFGTPAERQALVNEMLGSIEENEPLQVMMKDQFANY 974
GQ+ +S + VI++ L P + ++ E+ E+ +++DQ+ NY
Sbjct: 991 DAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQ------LVQDQYGNY 1044
Query: 975 VVQKVLETCDDQQLELILNRIKVHLNALKKYTYGKHIVARVEKLVAAGERRISI 1028
V+Q VLE + I+ I+ ++ L ++ + ++V + + ER + I
Sbjct: 1045 VIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAVLI 1098
>sp|Q5R5X3|PUM1_PONAB Pumilio homolog 1 OS=Pongo abelii GN=PUM1 PE=2 SV=1
Length = 1186
Score = 414 bits (1063), Expect = e-114, Method: Compositional matrix adjust.
Identities = 186/338 (55%), Positives = 258/338 (76%), Gaps = 2/338 (0%)
Query: 681 SSLLDEFKSNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQA 740
S LL++F++N+ +L EIAGH++EFS DQ+GSRFIQ KLE AT E+ +VF EI+ A
Sbjct: 830 SRLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAA 889
Query: 741 LSLMTDVFGNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQ 800
LM DVFGNYVIQKFFE G+ Q LA+++ GHVL+L+LQMYGCRVIQKA+E + DQ
Sbjct: 890 YQLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQ 949
Query: 801 QTQMVKELDGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRV 860
Q +MV+ELDGH+++CV+DQNGNHV+QKCIECV ++QFI+ F QV LSTHPYGCRV
Sbjct: 950 QNEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRV 1009
Query: 861 IQRVLEHCHDEKTQSIMMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQ 920
IQR+LEHC ++T I ++E+ Q L QDQYGNYV+QHVLEHG+P ++S I+ ++ G
Sbjct: 1010 IQRILEHCLPDQTLPI-LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGN 1068
Query: 921 IVQMSQQKFASNVIEKCLSFGTPAERQALVNEMLGSIE-ENEPLQVMMKDQFANYVVQKV 979
++ +SQ KFASNV+EKC++ + ER L++E+ + + L MMKDQ+ANYVVQK+
Sbjct: 1069 VLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKM 1128
Query: 980 LETCDDQQLELILNRIKVHLNALKKYTYGKHIVARVEK 1017
++ + Q ++++++I+ H+ L+KYTYGKHI+A++EK
Sbjct: 1129 IDVAEPGQRKIVMHKIRPHIATLRKYTYGKHILAKLEK 1166
Score = 110 bits (276), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 137/294 (46%), Gaps = 18/294 (6%)
Query: 735 EIMPQALSLMTDVFGNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIE 794
++MP S + + F N Q+RE+A GH++ S +G R IQ +E
Sbjct: 823 DVMPSGRSRLLEDFRNNRYPNL-------QLREIA----GHIMEFSQDQHGSRFIQLKLE 871
Query: 795 VVELDQQTQMVKELDGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTH 854
++ + E+ + + D GN+VIQK E + + V++L+
Sbjct: 872 RATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQ 931
Query: 855 PYGCRVIQRVLEHCHDEKTQSIMMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAII 914
YGCRVIQ+ LE ++ Q+ M+ E+ V +DQ GN+VVQ +E +P II
Sbjct: 932 MYGCRVIQKALEFIPSDQ-QNEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII 990
Query: 915 KKLTGQIVQMSQQKFASNVIEKCLSFGTPAERQALVNEMLGSIEENEPLQVMMKDQFANY 974
GQ+ +S + VI++ L P + ++ E+ E+ +++DQ+ NY
Sbjct: 991 DAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQ------LVQDQYGNY 1044
Query: 975 VVQKVLETCDDQQLELILNRIKVHLNALKKYTYGKHIVARVEKLVAAGERRISI 1028
V+Q VLE + I+ I+ ++ L ++ + ++V + + ER + I
Sbjct: 1045 VIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAVLI 1098
>sp|Q2VB19|PUM1_CHICK Pumilio homolog 1 OS=Gallus gallus GN=PUM1 PE=2 SV=1
Length = 1189
Score = 410 bits (1055), Expect = e-113, Method: Compositional matrix adjust.
Identities = 187/340 (55%), Positives = 258/340 (75%), Gaps = 4/340 (1%)
Query: 681 SSLLDEFKSNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQA 740
S LL++F++N+ +L EIAGH++EFS DQ+GSRFIQ KLE AT E+ +VF EI+ A
Sbjct: 831 SRLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAA 890
Query: 741 LSLMTDVFGNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQ 800
LM DVFGNYVIQKFFE G+ Q LA+++ GHVL+L+LQMYGCRVIQKA+E + DQ
Sbjct: 891 YQLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPPDQ 950
Query: 801 QT--QMVKELDGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGC 858
Q +MV+ELDGH+++CV+DQNGNHV+QKCIECV ++QFI+ F QV LSTHPYGC
Sbjct: 951 QVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGC 1010
Query: 859 RVIQRVLEHCHDEKTQSIMMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLT 918
RVIQR+LEHC E+T I ++E+ Q L QDQYGNYV+QHVLEHG+P ++S I+ ++
Sbjct: 1011 RVIQRILEHCLPEQTLPI-LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIR 1069
Query: 919 GQIVQMSQQKFASNVIEKCLSFGTPAERQALVNEMLGSIE-ENEPLQVMMKDQFANYVVQ 977
G ++ +SQ KFASNV+EKC++ + ER L++E+ + + L MMKDQ+ANYVVQ
Sbjct: 1070 GNVLVLSQHKFASNVVEKCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQ 1129
Query: 978 KVLETCDDQQLELILNRIKVHLNALKKYTYGKHIVARVEK 1017
K+++ + Q ++++++I+ H+ L+KYTYGKHI+A++EK
Sbjct: 1130 KMIDVAEPAQRKIVMHKIRPHIATLRKYTYGKHILAKLEK 1169
Score = 110 bits (275), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 137/295 (46%), Gaps = 18/295 (6%)
Query: 735 EIMPQALSLMTDVFGNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIE 794
++MP S + + F N Q+RE+A GH++ S +G R IQ +E
Sbjct: 824 DVMPSGRSRLLEDFRNNRYPNL-------QLREIA----GHIMEFSQDQHGSRFIQLKLE 872
Query: 795 VVELDQQTQMVKELDGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTH 854
++ + E+ + + D GN+VIQK E + + V++L+
Sbjct: 873 RATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQ 932
Query: 855 PYGCRVIQRVLEHCH-DEKTQSIMMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAI 913
YGCRVIQ+ LE D++ + M+ E+ V +DQ GN+VVQ +E +P I
Sbjct: 933 MYGCRVIQKALEFIPPDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFI 992
Query: 914 IKKLTGQIVQMSQQKFASNVIEKCLSFGTPAERQALVNEMLGSIEENEPLQVMMKDQFAN 973
I GQ+ +S + VI++ L P + ++ E+ E+ +++DQ+ N
Sbjct: 993 IDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPILEELHQHTEQ------LVQDQYGN 1046
Query: 974 YVVQKVLETCDDQQLELILNRIKVHLNALKKYTYGKHIVARVEKLVAAGERRISI 1028
YV+Q VLE + I+ I+ ++ L ++ + ++V + + ER + I
Sbjct: 1047 YVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAMLI 1101
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 61/117 (52%), Gaps = 6/117 (5%)
Query: 914 IKKLTGQIVQMSQQKFASNVIEKCLSFGTPAERQALVNEMLGSIEENEPLQVMMKDQFAN 973
++++ G I++ SQ + S I+ L TPAERQ + NE+L + + +M D F N
Sbjct: 847 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQ------LMVDVFGN 900
Query: 974 YVVQKVLETCDDQQLELILNRIKVHLNALKKYTYGKHIVARVEKLVAAGERRISIMT 1030
YV+QK E +Q + RI+ H+ +L YG ++ + + + ++ I+ M
Sbjct: 901 YVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPPDQQVINEMV 957
>sp|Q80U78|PUM1_MOUSE Pumilio homolog 1 OS=Mus musculus GN=Pum1 PE=1 SV=2
Length = 1189
Score = 409 bits (1051), Expect = e-113, Method: Compositional matrix adjust.
Identities = 186/340 (54%), Positives = 258/340 (75%), Gaps = 4/340 (1%)
Query: 681 SSLLDEFKSNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQA 740
S LL++F++N+ +L EIAGH++EFS DQ+GSRFIQ KLE AT E+ +VF EI+ A
Sbjct: 831 SRLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAA 890
Query: 741 LSLMTDVFGNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQ 800
LM DVFGNYVIQKFFE G+ Q LA+++ GHVL+L+LQMYGCRVIQKA+E + DQ
Sbjct: 891 YQLMVDVFGNYVIQKFFEFGSHEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQ 950
Query: 801 QT--QMVKELDGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGC 858
Q +MV+ELDGH+++CV+DQNGNHV+QKCIECV ++QFI+ F QV LSTHPYGC
Sbjct: 951 QVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGC 1010
Query: 859 RVIQRVLEHCHDEKTQSIMMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLT 918
RVIQR+LEHC ++T I ++E+ Q L QDQYGNYV+QHVLEHG+P ++S I+ ++
Sbjct: 1011 RVIQRILEHCLPDQTLPI-LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIR 1069
Query: 919 GQIVQMSQQKFASNVIEKCLSFGTPAERQALVNEMLGSIE-ENEPLQVMMKDQFANYVVQ 977
G ++ +SQ KFASNV+EKC++ + ER L++E+ + + L MMKDQ+ANYVVQ
Sbjct: 1070 GNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQ 1129
Query: 978 KVLETCDDQQLELILNRIKVHLNALKKYTYGKHIVARVEK 1017
K+++ + Q ++++++I+ H+ L+KYTYGKHI+A++EK
Sbjct: 1130 KMIDVAEPGQRKIVMHKIRPHIATLRKYTYGKHILAKLEK 1169
Score = 112 bits (280), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 137/295 (46%), Gaps = 18/295 (6%)
Query: 735 EIMPQALSLMTDVFGNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIE 794
++MP S + + F N Q+RE+A GH++ S +G R IQ +E
Sbjct: 824 DVMPSGRSRLLEDFRNNRYPNL-------QLREIA----GHIMEFSQDQHGSRFIQLKLE 872
Query: 795 VVELDQQTQMVKELDGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTH 854
++ + E+ + + D GN+VIQK E + + V++L+
Sbjct: 873 RATAAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSHEQKLALAERIRGHVLSLALQ 932
Query: 855 PYGCRVIQRVLEHC-HDEKTQSIMMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAI 913
YGCRVIQ+ LE D++ + M+ E+ V +DQ GN+VVQ +E +P I
Sbjct: 933 MYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFI 992
Query: 914 IKKLTGQIVQMSQQKFASNVIEKCLSFGTPAERQALVNEMLGSIEENEPLQVMMKDQFAN 973
I GQ+ +S + VI++ L P + ++ E+ E+ +++DQ+ N
Sbjct: 993 IDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQ------LVQDQYGN 1046
Query: 974 YVVQKVLETCDDQQLELILNRIKVHLNALKKYTYGKHIVARVEKLVAAGERRISI 1028
YV+Q VLE + I+ I+ ++ L ++ + ++V + + ER + I
Sbjct: 1047 YVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAVLI 1101
Score = 60.5 bits (145), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 61/117 (52%), Gaps = 6/117 (5%)
Query: 914 IKKLTGQIVQMSQQKFASNVIEKCLSFGTPAERQALVNEMLGSIEENEPLQVMMKDQFAN 973
++++ G I++ SQ + S I+ L T AERQ + NE+L + + +M D F N
Sbjct: 847 LREIAGHIMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQ------LMVDVFGN 900
Query: 974 YVVQKVLETCDDQQLELILNRIKVHLNALKKYTYGKHIVARVEKLVAAGERRISIMT 1030
YV+QK E +Q + RI+ H+ +L YG ++ + + + + ++ I+ M
Sbjct: 901 YVIQKFFEFGSHEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMV 957
>sp|O94462|PUF3_SCHPO mRNA-binding protein puf3 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=puf3 PE=2 SV=4
Length = 732
Score = 369 bits (946), Expect = e-100, Method: Compositional matrix adjust.
Identities = 170/340 (50%), Positives = 242/340 (71%), Gaps = 4/340 (1%)
Query: 681 SSLLDEFKSNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQA 740
S +L F +NK + FELS+I G+VV FS DQ+GSRFIQQKL TAT EE+ VFQEI +
Sbjct: 378 SRVLYLFHANKQRHFELSDILGNVVLFSTDQHGSRFIQQKLATATEEEREAVFQEIASTS 437
Query: 741 -LSLMTDVFGNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELD 799
L LM D+FGNYV+QK+FE G Q + L Q+ GHV +LSLQMYGCRV+QKAIE + +
Sbjct: 438 CLQLMMDIFGNYVVQKYFEFGNEKQKQILLSQIKGHVFSLSLQMYGCRVVQKAIEYISPE 497
Query: 800 QQTQMVKELDGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCR 859
Q Q+++ELDGH++ CV DQNGNHVIQK IEC+ +QFI+ Q+ LS HPYGCR
Sbjct: 498 HQVQLIQELDGHVLDCVCDQNGNHVIQKAIECIDTGHLQFILRALRPQIHVLSAHPYGCR 557
Query: 860 VIQRVLEHCHDEKTQSIMMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTG 919
VIQR +EHCH E+ ++++E+L + L QDQYGNYVVQH+L G ++ I +
Sbjct: 558 VIQRAIEHCHSER--KLIIEELLPHILKLTQDQYGNYVVQHILRTGSESDKKYIFDLMID 615
Query: 920 QIVQMSQQKFASNVIEKCLSFGTPAERQALVNEMLGSIEEN-EPLQVMMKDQFANYVVQK 978
++ +S KFASNV+E+C+S+ + +R+ ++N+++ EN L +MMKD++ANYV+QK
Sbjct: 616 HLLFLSCHKFASNVVERCISYISDVDRRRILNKIISEKAENCSILMLMMKDKYANYVIQK 675
Query: 979 VLETCDDQQLELILNRIKVHLNALKKYTYGKHIVARVEKL 1018
+L+ +++ +L+++ I H++ LKK+TYGKH++ VE+
Sbjct: 676 LLDASPEEERDLLISYIYPHISVLKKFTYGKHLIMSVERF 715
Score = 105 bits (261), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 133/274 (48%), Gaps = 16/274 (5%)
Query: 756 FFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKEL-DGHIMR 814
+ H + EL+D L G+V+ S +G R IQ+ + +++ + +E+ ++
Sbjct: 382 YLFHANKQRHFELSDIL-GNVVLFSTDQHGSRFIQQKLATATEEEREAVFQEIASTSCLQ 440
Query: 815 CVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEHCHDEKTQ 874
+ D GN+V+QK E E Q ++ V +LS YGCRV+Q+ +E+ E
Sbjct: 441 LMMDIFGNYVVQKYFEFGNEKQKQILLSQIKGHVFSLSLQMYGCRVVQKAIEYISPEHQV 500
Query: 875 SIMMD---EILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQIVQMSQQKFAS 931
++ + +L VC DQ GN+V+Q +E I++ L QI +S +
Sbjct: 501 QLIQELDGHVLDCVC----DQNGNHVIQKAIECIDTGHLQFILRALRPQIHVLSAHPYGC 556
Query: 932 NVIEKCLSFGTPAERQALVNEMLGSIEENEPLQVMMKDQFANYVVQKVLETCDDQQLELI 991
VI++ + +ER+ ++ E+L I + + +DQ+ NYVVQ +L T + + I
Sbjct: 557 RVIQRAIE-HCHSERKLIIEELLPHILK------LTQDQYGNYVVQHILRTGSESDKKYI 609
Query: 992 LNRIKVHLNALKKYTYGKHIVARVEKLVAAGERR 1025
+ + HL L + + ++V R ++ +RR
Sbjct: 610 FDLMIDHLLFLSCHKFASNVVERCISYISDVDRR 643
>sp|Q07807|PUF3_YEAST mRNA-binding protein PUF3 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=PUF3 PE=1 SV=1
Length = 879
Score = 292 bits (747), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 146/341 (42%), Positives = 222/341 (65%), Gaps = 15/341 (4%)
Query: 697 LSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKF 756
L +I GH +EF DQ+GSRFIQ++L T+ EK ++F EI A+ L DVFGNYVIQKF
Sbjct: 536 LKDIFGHSLEFCKDQHGSRFIQRELATSPASEKEVIFNEIRDDAIELSNDVFGNYVIQKF 595
Query: 757 FEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKELDGHIMRCV 816
FE G+ Q L DQ G++ LSLQMY CRVIQKA+E ++ +Q+ ++V EL +++ +
Sbjct: 596 FEFGSKIQKNTLVDQFKGNMKQLSLQMYACRVIQKALEYIDSNQRIELVLELSDSVLQMI 655
Query: 817 RDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEHCHDEKTQSI 876
+DQNGNHVIQK IE +P + + FI+ + + LSTH YGCRVIQR+LE E +SI
Sbjct: 656 KDQNGNHVIQKAIETIPIEKLPFILSSLTGHIYHLSTHSYGCRVIQRLLEFGSSEDQESI 715
Query: 877 MMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERS------AIIKKLTGQIVQMSQQKFA 930
++E+ + L QDQYGNYV+Q+VL+ + + II+ + +V+ S+ KFA
Sbjct: 716 -LNELKDFIPYLIQDQYGNYVIQYVLQQDQFTNKEMVDIKQEIIETVANNVVEYSKHKFA 774
Query: 931 SNVIEKCLSFGTPAERQALVNEMLG-------SIEENEPLQVMMKDQFANYVVQKVLETC 983
SNV+EK + +G+ ++ +++++L ++E++ P+ +M+KDQFANYV+QK++
Sbjct: 775 SNVVEKSILYGSKNQKDLIISKILPRDKNHALNLEDDSPMILMIKDQFANYVIQKLVNVS 834
Query: 984 DDQQLELILNRIKVHLNALKKY-TYGKHIVARVEKLVAAGE 1023
+ + +LI+ I+ +L+ L K + G +A VEKL A E
Sbjct: 835 EGEGKKLIVIAIRAYLDKLNKSNSLGNRHLASVEKLAALVE 875
Score = 38.9 bits (89), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/111 (19%), Positives = 51/111 (45%), Gaps = 6/111 (5%)
Query: 914 IKKLTGQIVQMSQQKFASNVIEKCLSFGTPAERQALVNEMLGSIEENEPLQVMMKDQFAN 973
+K + G ++ + + S I++ L+ +E++ + NE+ E + D F N
Sbjct: 536 LKDIFGHSLEFCKDQHGSRFIQRELATSPASEKEVIFNEIRDDAIE------LSNDVFGN 589
Query: 974 YVVQKVLETCDDQQLELILNRIKVHLNALKKYTYGKHIVARVEKLVAAGER 1024
YV+QK E Q ++++ K ++ L Y ++ + + + + +R
Sbjct: 590 YVIQKFFEFGSKIQKNTLVDQFKGNMKQLSLQMYACRVIQKALEYIDSNQR 640
>sp|Q92359|YDHE_SCHPO Pumilio domain-containing protein C6G9.14 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC6G9.14 PE=4 SV=1
Length = 681
Score = 215 bits (548), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 106/317 (33%), Positives = 181/317 (57%), Gaps = 6/317 (1%)
Query: 702 GHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKFFEHGT 761
+++ F DQ+G R++Q+ LE + VF E P LM D FGNY+ QK FEH +
Sbjct: 346 SNILSFCKDQHGCRYLQRLLEKKNQSHIDAVFAETHPYLAVLMVDAFGNYLCQKLFEHAS 405
Query: 762 ASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVEL-DQQTQMVKELDGHIMRCVRDQN 820
+Q + ++ +S M+G R +QK I++V DQ + +V L +++ +D N
Sbjct: 406 EAQRSTFIQIIAPKLVPISFNMHGTRALQKIIDLVSSPDQISCIVNALRPNVVLLTKDLN 465
Query: 821 GNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEHCHDEKTQSIMMDE 880
GNHVIQKC+ ++ QFI + + +STH +GC V+QR +H + + +++
Sbjct: 466 GNHVIQKCLNKFSQEDCQFIFDAICEDPLDVSTHRHGCCVVQRCFDHASPAQIEQ-LVEH 524
Query: 881 ILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQIVQMSQQKFASNVIEKCLSF 940
I+ L QD +GNYV+Q+VLE P+ AII ++ +S QKF+SNV+EKC+ F
Sbjct: 525 IVPHALTLVQDAFGNYVLQYVLELNNPNHTEAIISYFLYKVRALSTQKFSSNVMEKCIFF 584
Query: 941 GTPAERQALVNEMLGSIEENEPLQVMMKDQFANYVVQKVLETCDDQQLELILNRIKVHLN 1000
A ++ L++E++ + + L +++D FANYV+Q L+ +Q ++ RIK +
Sbjct: 585 APAAIKEKLISELM----DEKHLPKLLRDSFANYVIQTALDNASVKQRAELVERIKPLIP 640
Query: 1001 ALKKYTYGKHIVARVEK 1017
++K G+ I++++E+
Sbjct: 641 SIKNTPCGRRILSKLER 657
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/211 (19%), Positives = 97/211 (45%), Gaps = 8/211 (3%)
Query: 809 DGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEHC 868
+ +I+ +DQ+G +Q+ +E + I + + + L +G + Q++ EH
Sbjct: 345 NSNILSFCKDQHGCRYLQRLLEKKNQSHIDAVFAETHPYLAVLMVDAFGNYLCQKLFEHA 404
Query: 869 HDEKTQSIMMDEILQSVCMLAQDQYGNYVVQHVLEH-GKPHERSAIIKKLTGQIVQMSQQ 927
E +S + I + ++ + +G +Q +++ P + S I+ L +V +++
Sbjct: 405 -SEAQRSTFIQIIAPKLVPISFNMHGTRALQKIIDLVSSPDQISCIVNALRPNVVLLTKD 463
Query: 928 KFASNVIEKCLSFGTPAERQALVNEMLGSIEENEPLQVMMKDQFANYVVQKVLETCDDQQ 987
++VI+KCL+ + + Q + + + +PL V + VVQ+ + Q
Sbjct: 464 LNGNHVIQKCLNKFSQEDCQFIFDAIC-----EDPLDVSTH-RHGCCVVQRCFDHASPAQ 517
Query: 988 LELILNRIKVHLNALKKYTYGKHIVARVEKL 1018
+E ++ I H L + +G +++ V +L
Sbjct: 518 IEQLVEHIVPHALTLVQDAFGNYVLQYVLEL 548
>sp|Q09829|YAD3_SCHPO Pumilio domain-containing protein C4G8.03c OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC4G8.03c PE=4 SV=1
Length = 780
Score = 190 bits (483), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 101/317 (31%), Positives = 180/317 (56%), Gaps = 10/317 (3%)
Query: 702 GHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKFFEHGT 761
GH+ DQYG R++Q+ L+ ++ F EI + LM D FGNY+ QK F + +
Sbjct: 465 GHLSTICKDQYGCRYLQKLLDENPKVNASLFFPEIRQSVVQLMIDPFGNYMCQKLFVYAS 524
Query: 762 ASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMV-KELDGHIMRCVRDQN 820
Q + + + ++ + +YG R +Q I+ + ++Q ++ K + + D N
Sbjct: 525 REQKLSMLNGIGEGIVDICSNLYGTRSMQNIIDKLTSNEQISLLLKIIIPSLTTLACDNN 584
Query: 821 GNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEHCHDEKTQSIMMDE 880
G HV+QKCI P + ++ + L+ + ++TL+T+ +GC ++QR L+ + + Q +++
Sbjct: 585 GTHVLQKCIAKFPPEKLEPLFLSMEENLITLATNRHGCCILQRCLDRTNGD-IQERLVNS 643
Query: 881 ILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQIVQMSQQKFASNVIEKCLSF 940
I++S +L Q+ YGNY+VQHVLE II+K G I ++S QKF+SN IE+C+
Sbjct: 644 IIKSCLLLVQNAYGNYLVQHVLELNIQPYTERIIEKFFGNICKLSLQKFSSNAIEQCIRT 703
Query: 941 GTPAERQALVNEMLG--SIEENEPLQVMMKDQFANYVVQKVLETCDDQQLELILNRIKVH 998
+P+ R+ ++ E L +IE+ ++ D +ANYV+Q+ L D+ Q LIL I
Sbjct: 704 ASPSTREQMLQEFLSFPNIEQ------LLDDCYANYVMQRFLNVADESQKFLILRSISHV 757
Query: 999 LNALKKYTYGKHIVARV 1015
+ ++ +G+HI+A++
Sbjct: 758 IPKIQNTRHGRHILAKL 774
Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/219 (16%), Positives = 94/219 (42%), Gaps = 3/219 (1%)
Query: 682 SLLDEFKSNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQAL 741
+++D+ SN+ L I + + D G+ +Q+ + E+ +F + +
Sbjct: 554 NIIDKLTSNEQISLLLKIIIPSLTTLACDNNGTHVLQKCIAKFPPEKLEPLFLSMEENLI 613
Query: 742 SLMTDVFGNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQ 801
+L T+ G ++Q+ + L + + L L YG ++Q +E+
Sbjct: 614 TLATNRHGCCILQRCLDRTNGDIQERLVNSIIKSCLLLVQNAYGNYLVQHVLELNIQPYT 673
Query: 802 TQMVKELDGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTF--YDQVVTLSTHPYGCR 859
+++++ G+I + + ++ I++CI + ++ F + + L Y
Sbjct: 674 ERIIEKFFGNICKLSLQKFSSNAIEQCIRTASPSTREQMLQEFLSFPNIEQLLDDCYANY 733
Query: 860 VIQRVLEHCHDEKTQSIMMDEILQSVCMLAQDQYGNYVV 898
V+QR L + DE + +++ I + + ++G +++
Sbjct: 734 VMQRFL-NVADESQKFLILRSISHVIPKIQNTRHGRHIL 771
>sp|Q9LM20|PUM8_ARATH Putative pumilio homolog 8, chloroplastic OS=Arabidopsis thaliana
GN=APUM8 PE=3 SV=2
Length = 515
Score = 182 bits (461), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 101/323 (31%), Positives = 180/323 (55%), Gaps = 11/323 (3%)
Query: 696 ELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQK 755
++SE G+V + DQ+G RF+Q E + + ++F E++P + LM D FGNY++QK
Sbjct: 195 KVSEFQGYVYFMAKDQHGCRFLQWIFEDGSALDALVIFSEVIPHVVELMMDPFGNYLMQK 254
Query: 756 FFEHGTASQVRELADQLT---GHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKE-LDGH 811
+ Q ++ +T G ++ +SL YG RV+Q+ +E ++ +Q +VK L
Sbjct: 255 LLDVCNEEQRTQIILMVTSEPGQLIRISLNAYGTRVVQRLVESIKTRKQISLVKSALRPG 314
Query: 812 IMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEHCHDE 871
+ +RD NGNHVIQ+C++C+ + +FI + ++TH +GC V+Q+ + +
Sbjct: 315 FLNLIRDLNGNHVIQRCLQCLSTEDNEFIFEDATKFCIDIATHRHGCCVLQKCIAYSSGL 374
Query: 872 KTQSIMMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQIVQMSQQKFAS 931
+ + ++ EI ++ LAQD YGNY VQ VLE +A++ +L G V++S QKF+S
Sbjct: 375 QREK-LVTEISRNSLFLAQDPYGNYAVQFVLELRDFSAIAAMLAQLKGHYVELSMQKFSS 433
Query: 932 NVIEKCLSFGTPAERQALVNEMLGSIEENEPLQVMMKDQFANYVVQKVLETCDDQQLELI 991
+++E+CL+ P R +V E++ ++++D +AN+V+Q L +
Sbjct: 434 HMVERCLT-HCPESRPQIVRELISVPH----FDILIQDPYANFVIQAALAVTKGSLHATL 488
Query: 992 LNRIKVHLNALKKYTYGKHIVAR 1014
+ I+ H + L+ Y K I +R
Sbjct: 489 VEVIRPH-SILRNNPYCKRIFSR 510
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 81/184 (44%), Gaps = 1/184 (0%)
Query: 683 LLDEFKSNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALS 742
L++ K+ K S + + D G+ IQ+ L+ +TE+ +F++ +
Sbjct: 294 LVESIKTRKQISLVKSALRPGFLNLIRDLNGNHVIQRCLQCLSTEDNEFIFEDATKFCID 353
Query: 743 LMTDVFGNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQT 802
+ T G V+QK + + Q +L +++ + L L+ YG +Q +E+ +
Sbjct: 354 IATHRHGCCVLQKCIAYSSGLQREKLVTEISRNSLFLAQDPYGNYAVQFVLELRDFSAIA 413
Query: 803 QMVKELDGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIV-LTFYDQVVTLSTHPYGCRVI 861
M+ +L GH + + +H++++C+ PE Q + L L PY VI
Sbjct: 414 AMLAQLKGHYVELSMQKFSSHMVERCLTHCPESRPQIVRELISVPHFDILIQDPYANFVI 473
Query: 862 QRVL 865
Q L
Sbjct: 474 QAAL 477
Score = 41.2 bits (95), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 28/131 (21%), Positives = 63/131 (48%), Gaps = 20/131 (15%)
Query: 907 PHERSAIIKKLTGQIVQMSQQKFASNVIEKCLSFGTPAERQALVNEMLGSIEENEPLQVM 966
P+E + + G + M++ + ++ G+ + + +E++ + E +
Sbjct: 189 PNESLPKVSEFQGYVYFMAKDQHGCRFLQWIFEDGSALDALVIFSEVIPHVVE------L 242
Query: 967 MKDQFANYVVQKVLETCDDQQLELIL--------NRIKVHLNALKKYTYGKHIVARVEKL 1018
M D F NY++QK+L+ C+++Q I+ I++ LNA YG +V R+ +
Sbjct: 243 MMDPFGNYLMQKLLDVCNEEQRTQIILMVTSEPGQLIRISLNA-----YGTRVVQRLVES 297
Query: 1019 VAAGERRISIM 1029
+ ++IS++
Sbjct: 298 IKT-RKQISLV 307
>sp|P25339|PUF4_YEAST Pumilio homology domain family member 4 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=PUF4 PE=1 SV=2
Length = 888
Score = 180 bits (456), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 107/325 (32%), Positives = 175/325 (53%), Gaps = 24/325 (7%)
Query: 669 SEAGGSLDES--FASSLLDEFKSNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATT 726
+E ++ES FA ++LD++ G + DQ+G RF+Q++L+ +
Sbjct: 544 AEKQRKIEESSRFADAVLDQY-------------IGSIHSLCKDQHGCRFLQKQLDILGS 590
Query: 727 EEKNMVFQEIMPQALSLMTDVFGNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGC 786
+ + +F+E + LMTD FGNY+IQK E T Q L + H + +SL +G
Sbjct: 591 KAADAIFEETKDYTVELMTDSFGNYLIQKLLEEVTTEQRIVLTKISSPHFVEISLNPHGT 650
Query: 787 RVIQKAIEVVELDQQTQMVKE-LDGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFY 845
R +QK IE ++ D++ Q+V + L + ++ +D NGNHVIQKC++ + + QFI
Sbjct: 651 RALQKLIECIKTDEEAQIVVDSLRPYTVQLSKDLNGNHVIQKCLQRLKPENFQFIFDAIS 710
Query: 846 DQVVTLSTHPYGCRVIQRVLEHCHDEKTQSIMMDEILQSVCMLAQDQYGNYVVQHVL--- 902
D + ++TH +GC V+QR L+H E+ + + D++L V L D +GNYVVQ+++
Sbjct: 711 DSCIDIATHRHGCCVLQRCLDHGTTEQCDN-LCDKLLALVDKLTLDPFGNYVVQYIITKE 769
Query: 903 -EHGKPHERSAIIKKLTGQIVQMSQQKFASNVIEKCLSFGTPAERQALVNEMLGSIEENE 961
E K I+ L + +++S KF SNVIEK L +E L E+L + E
Sbjct: 770 AEKNKYDYTHKIVHLLKPRAIELSIHKFGSNVIEKILKTAIVSEPMIL--EILNNGGETG 827
Query: 962 PLQVMMKDQFANYVVQKVLETCDDQ 986
+Q ++ D + NYV+Q L+ Q
Sbjct: 828 -IQSLLNDSYGNYVLQTALDISHKQ 851
Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 127/263 (48%), Gaps = 14/263 (5%)
Query: 770 DQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKELDGHIMRCVRDQNGNHVIQKCI 829
DQ G + +L +GCR +QK ++++ + +E + + + D GN++IQK +
Sbjct: 562 DQYIGSIHSLCKDQHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGNYLIQKLL 621
Query: 830 ECVPEDAIQFIVLTFYD--QVVTLSTHPYGCRVIQRVLEHCHDEKTQSIMMDEILQSVCM 887
E V + Q IVLT V +S +P+G R +Q+++E ++ I++D +
Sbjct: 622 EEVTTE--QRIVLTKISSPHFVEISLNPHGTRALQKLIECIKTDEEAQIVVDSLRPYTVQ 679
Query: 888 LAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQIVQMSQQKFASNVIEKCLSFGTPAERQ 947
L++D GN+V+Q L+ KP I ++ + ++ + V+++CL GT +
Sbjct: 680 LSKDLNGNHVIQKCLQRLKPENFQFIFDAISDSCIDIATHRHGCCVLQRCLDHGTTEQCD 739
Query: 948 ALVNEMLGSIEENEPLQVMMKDQFANYVVQKVL----ETCDDQQLELILNRIKVHLNALK 1003
L +++L +++ + D F NYVVQ ++ E I++ +K L
Sbjct: 740 NLCDKLLALVDK------LTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHLLKPRAIELS 793
Query: 1004 KYTYGKHIVARVEKLVAAGERRI 1026
+ +G +++ ++ K E I
Sbjct: 794 IHKFGSNVIEKILKTAIVSEPMI 816
>sp|Q9C9R6|PUM7_ARATH Putative pumilio homolog 7, chloroplastic OS=Arabidopsis thaliana
GN=APUM7 PE=3 SV=2
Length = 650
Score = 177 bits (450), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 100/322 (31%), Positives = 181/322 (56%), Gaps = 11/322 (3%)
Query: 697 LSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKF 756
+ +I G+V + DQ+G RF+Q+ + T+ + ++F E++ + LM D FGNY++QK
Sbjct: 331 MCDIQGYVYLMAKDQHGCRFLQRIFDEGTSVDAMIIFNEVIAHVVELMMDPFGNYLMQKL 390
Query: 757 FEHGTA---SQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVK-ELDGHI 812
+ T +Q+ +A + G ++ +SL YG RV+Q+ +E + +Q +VK L
Sbjct: 391 LDVCTEEQRTQIVLVATEEPGQLIRISLNAYGTRVVQRLVETIRSGKQISLVKLALRPGF 450
Query: 813 MRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEHCHDEK 872
+ ++D NGNHVIQ+C++C+ + +FI ++TH +GC V+Q+ + + ++
Sbjct: 451 LDLIKDLNGNHVIQRCLQCLSTEDNKFIFDAATKFCTEIATHRHGCCVLQKCIAYSMRQQ 510
Query: 873 TQSIMMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQIVQMSQQKFASN 932
+ ++ EI ++ +LAQD +GNY VQ V+E P + ++ +L G VQ+S QKF+S+
Sbjct: 511 REKLIA-EISRNSLLLAQDPFGNYAVQFVIELRIPSAVAMMLAQLKGHYVQLSMQKFSSH 569
Query: 933 VIEKCLSFGTPAERQALVNEMLGSIEENEPLQVMMKDQFANYVVQKVLETCDDQQLELIL 992
++E+CL P R +V E++ ++ LQ D +AN+V+Q L ++
Sbjct: 570 MVERCL-MHCPESRPQIVRELVSVPHFDQLLQ----DPYANFVIQAALAATKGPLHASLV 624
Query: 993 NRIKVHLNALKKYTYGKHIVAR 1014
I+ H + L+ Y K I +R
Sbjct: 625 EVIRPH-SILRNNPYCKRIFSR 645
>sp|Q9LVC3|PUM12_ARATH Pumilio homolog 12 OS=Arabidopsis thaliana GN=APUM12 PE=2 SV=2
Length = 596
Score = 167 bits (423), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 96/323 (29%), Positives = 177/323 (54%), Gaps = 13/323 (4%)
Query: 697 LSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKF 756
++E G + + DQ+G RF+Q+ + M+F EI+ LM D FGNY++QK
Sbjct: 275 IAEARGKIYYLAKDQHGCRFLQRIFSEKDGNDIEMIFNEIIDYISELMMDPFGNYLVQKL 334
Query: 757 FEHGTASQVRELADQLT---GHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKELDGH-I 812
E Q ++ +T G ++ +S M+G R +QK +E + +++ ++ H I
Sbjct: 335 LEVCNEDQRMQIVHSITRKPGLLIKISCDMHGTRAVQKIVETAKREEEISIIISALKHGI 394
Query: 813 MRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEHCHDEK 872
+ +++ NGNHV+Q+C++ + +F+ V L+T +GC V+Q+ L + E+
Sbjct: 395 VHLIKNVNGNHVVQRCLQYLLPYCGKFLFEAAITHCVELATDRHGCCVLQKCLGYSEGEQ 454
Query: 873 TQSIMMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQIVQMSQQKFASN 932
Q ++ EI + +L+QD +GNYV+Q+V E I+++L G ++S QK +SN
Sbjct: 455 KQH-LVSEIASNALLLSQDPFGNYVLQYVFELQLQWATFEILEQLEGNYTELSMQKCSSN 513
Query: 933 VIEKCLSFGTPAERQALVNEML--GSIEENEPLQVMMKDQFANYVVQKVLETCDDQQLEL 990
V+EKCL R ++ E++ G ++ QVM+ D + NYV+Q L+ L
Sbjct: 514 VVEKCLKLADDKHRARIIRELINYGRLD-----QVML-DPYGNYVIQAALKQSKGNVHAL 567
Query: 991 ILNRIKVHLNALKKYTYGKHIVA 1013
+++ IK+++++L+ YGK +++
Sbjct: 568 LVDAIKLNISSLRTNPYGKKVLS 590
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 58/118 (49%), Gaps = 8/118 (6%)
Query: 914 IKKLTGQIVQMSQQKFASNVIEKCLSFGTPAERQALVNEMLGSIEENEPLQVMMKDQFAN 973
I + G+I +++ + +++ S + + + NE++ I E +M D F N
Sbjct: 275 IAEARGKIYYLAKDQHGCRFLQRIFSEKDGNDIEMIFNEIIDYISE------LMMDPFGN 328
Query: 974 YVVQKVLETCDDQQLELILNRIKVHLNALKKYTYGKHIVARVEKLV--AAGERRISIM 1029
Y+VQK+LE C++ Q I++ I L K + H V+K+V A E ISI+
Sbjct: 329 YLVQKLLEVCNEDQRMQIVHSITRKPGLLIKISCDMHGTRAVQKIVETAKREEEISII 386
>sp|P39016|MPT5_YEAST Suppressor protein MPT5 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=MPT5 PE=1 SV=2
Length = 859
Score = 160 bits (404), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 99/316 (31%), Positives = 174/316 (55%), Gaps = 41/316 (12%)
Query: 705 VEFSADQYGSRFIQQKLETATTEEKNMV----FQEIMPQALSLMTDVFGNYVIQKFFEHG 760
++ + DQ+G RF+Q+KLET + E NMV +++I P L L+ D FGNY++QK ++
Sbjct: 216 IKLATDQFGCRFLQKKLETPS--ESNMVRDLMYEQIKPFFLDLILDPFGNYLVQKLCDYL 273
Query: 761 TASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMV-----KELDG--HIM 813
TA Q L + +V +S+ YG R +QK I+ V+ + Q ++ +E ++
Sbjct: 274 TAEQKTLLIQTIYPNVFQISINQYGTRSLQKIIDTVDNEVQIDLIIKGFSQEFTSIEQVV 333
Query: 814 RCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQ--VVTLSTHPYGCRVIQRVLEHCHDE 871
+ D NGNHVIQKCI FI+ +Q ++T+STH +GC V+Q++L C +
Sbjct: 334 TLINDLNGNHVIQKCIFKFSPSKFGFIIDAIVEQNNIITISTHKHGCCVLQKLLSVCTLQ 393
Query: 872 KTQSIMMDEILQSVCMLAQDQYGNYVVQHVLEHGKP--HERSAIIKKLTGQIVQMSQQKF 929
+ I + +I+Q + L DQ+GNY++Q +L+ + + + + +L+ ++ Q+S KF
Sbjct: 394 QIFKISV-KIVQFLPGLINDQFGNYIIQFLLDIKELDFYLLAELFNRLSNELCQLSCLKF 452
Query: 930 ASNVIEKCL-------------SFGTPAERQAL---------VNEMLGSIE-ENEPLQVM 966
+SNV+EK + + G ++R A+ +N +L +I+ L V+
Sbjct: 453 SSNVVEKFIKKLFRIITGFIVNNNGGASQRTAVASDDVINASMNILLTTIDIFTVNLNVL 512
Query: 967 MKDQFANYVVQKVLET 982
++D F NY +Q +L+
Sbjct: 513 IRDNFGNYALQTLLDV 528
Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 121/262 (46%), Gaps = 45/262 (17%)
Query: 684 LDEFKSNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTE-EKNMVF----QEI-- 736
L ++ + + K + I +V + S +QYG+R +Q+ ++T E + +++ QE
Sbjct: 269 LCDYLTAEQKTLLIQTIYPNVFQISINQYGTRSLQKIIDTVDNEVQIDLIIKGFSQEFTS 328
Query: 737 MPQALSLMTDVFGNYVIQKFFEHGTASQVRELADQLT--GHVLTLSLQMYGCRVIQKAIE 794
+ Q ++L+ D+ GN+VIQK + S+ + D + +++T+S +GC V+QK +
Sbjct: 329 IEQVVTLINDLNGNHVIQKCIFKFSPSKFGFIIDAIVEQNNIITISTHKHGCCVLQKLLS 388
Query: 795 VVELDQQTQMVKELDGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLT-----FYDQVV 849
V L Q ++ ++ + + DQ GN++IQ ++ D F +L +++
Sbjct: 389 VCTLQQIFKISVKIVQFLPGLINDQFGNYIIQFLLDIKELD---FYLLAELFNRLSNELC 445
Query: 850 TLSTHPYGCRVIQRVLEHCHDEKTQSIM----------------------------MDEI 881
LS + V+++ ++ T I+ +D
Sbjct: 446 QLSCLKFSSNVVEKFIKKLFRIITGFIVNNNGGASQRTAVASDDVINASMNILLTTIDIF 505
Query: 882 LQSVCMLAQDQYGNYVVQHVLE 903
++ +L +D +GNY +Q +L+
Sbjct: 506 TVNLNVLIRDNFGNYALQTLLD 527
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/238 (20%), Positives = 106/238 (44%), Gaps = 36/238 (15%)
Query: 777 LTLSLQMYGCRVIQKAIEVVELDQQTQ--MVKELDGHIMRCVRDQNGNHVIQKCIECVPE 834
+ L+ +GCR +QK +E + M +++ + + D GN+++QK + +
Sbjct: 216 IKLATDQFGCRFLQKKLETPSESNMVRDLMYEQIKPFFLDLILDPFGNYLVQKLCDYLTA 275
Query: 835 DAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEHCHDEKTQSIMMDEILQSVCMLAQDQYG 894
+ ++ T Y V +S + YG R +Q++++ +E + +D I++
Sbjct: 276 EQKTLLIQTIYPNVFQISINQYGTRSLQKIIDTVDNE----VQIDLIIK----------- 320
Query: 895 NYVVQHVLEHGKPHERSAIIKKLTGQIVQMSQQKFASNVIEKCLSFGTPAERQALVNEML 954
G E ++I Q+V + ++VI+KC+ +P++ +++ +
Sbjct: 321 ----------GFSQEFTSI-----EQVVTLINDLNGNHVIQKCIFKFSPSKFGFIIDAI- 364
Query: 955 GSIEENEPLQVMMKDQFANYVVQKVLETCDDQQLELILNRIKVHLNALKKYTYGKHIV 1012
+E+N + + V+QK+L C QQ+ I +I L L +G +I+
Sbjct: 365 --VEQNNIITISTHKH-GCCVLQKLLSVCTLQQIFKISVKIVQFLPGLINDQFGNYII 419
>sp|O74438|MCP2_SCHPO Meiotic coiled-coil protein 2 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=mcp2 PE=4 SV=1
Length = 703
Score = 159 bits (402), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 100/337 (29%), Positives = 181/337 (53%), Gaps = 10/337 (2%)
Query: 689 SNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVF 748
S + ++ + I ++ S DQ S F+QQKL+ ++ + K + I+ Q LM + F
Sbjct: 352 SERNAVYDWNVIIDKII-VSNDQQSSIFLQQKLKISSYDMKQNIVDSIISQIHPLMLNRF 410
Query: 749 GNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKEL 808
GN+++Q+ FEHGTA Q+R++ + G++L L+ +GC V+QKAI+ V D + M+ EL
Sbjct: 411 GNFLVQRCFEHGTAPQIRQMGSAMLGNMLKLATDPFGCHVVQKAIDNVTEDIKLAMMDEL 470
Query: 809 DGHIMRCVRDQNGNHVIQKCIEC----VPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRV 864
I + HV QK E P + + + + ++ G V+Q +
Sbjct: 471 FLTIDVTIMHHYACHVWQKLFETQWYEYPVNVMNRVNNALRGKWHEVAVGENGSLVVQNM 530
Query: 865 LEHCHDEKTQSIMMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQIVQM 924
E+C EK + ++EI+ + +A+ Q+GN+VVQH++E+G+ + +I L + V+
Sbjct: 531 FENCV-EKDKRECIEEIIFHLDGIARGQWGNWVVQHMVENGQGEDLKRVIDALLNRAVEF 589
Query: 925 SQQKFASNVIEKCLSFGTPAERQALVNEMLGSIEEN---EPLQVMMKDQFANYVVQKVLE 981
S +FAS VIEK + G P +L + + + + +PL + DQ+ NY++Q++++
Sbjct: 590 SIDQFASKVIEKAIKSG-PKNFISLYLKQITNARVDRTRQPLIDIASDQYGNYLIQQIIQ 648
Query: 982 TCDDQQLELILNRIKVHLNALKKYTYGKHIVARVEKL 1018
+ L++ IK H+ +L+ YG+ + VEK
Sbjct: 649 LGQPAEKNLVITHIKKHMVSLRGSKYGQKVAYLVEKW 685
>sp|Q9LDW3|PUM11_ARATH Pumilio homolog 11 OS=Arabidopsis thaliana GN=APUM11 PE=3 SV=2
Length = 556
Score = 158 bits (400), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 102/332 (30%), Positives = 180/332 (54%), Gaps = 16/332 (4%)
Query: 690 NKTKCFELSEIA---GHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTD 746
NK +L+ + G V + DQ G R +Q+ ++ + ++F+E++ + L TD
Sbjct: 229 NKEDSLDLASMVDSYGSVYLMAKDQLGCRLLQKFVDEGNFVDVMIIFKEVINNVIELGTD 288
Query: 747 VFGNYVIQKFFEHGTASQVRELADQLT---GHVLTLSLQMYGCRVIQKAIEVVELDQQTQ 803
FGNY+IQK E Q ++ +LT G ++ +S+ YG RV+QK IE V +Q
Sbjct: 289 PFGNYLIQKLIEVCNEEQRTQILIRLTSKPGLLVKISINNYGTRVVQKLIETVTTKEQIS 348
Query: 804 MVKE-LDGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQ 862
+VK L + R+ NGNHVI C++ + +FI+ + ++T +GC V+Q
Sbjct: 349 LVKSALVPGFLSLFRELNGNHVILNCLKFFSPNDNKFILEAATKFCIEIATTRHGCCVLQ 408
Query: 863 RVLEHCHDEKTQSIMMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQIV 922
R + + E+ + ++DEI ++ +LAQD +GNY+VQ+++E K ++ +L G V
Sbjct: 409 RCVSYSVGEQHEK-LVDEISRNSLLLAQDPFGNYLVQYIIE--KKVGGVNVLFELRGNYV 465
Query: 923 QMSQQKFASNVIEKCLSFGTPAERQALVNEMLGSIEENEPLQVMMKDQFANYVVQKVLET 982
+++ QKF S+V+EKCL + P R +VNE++ + +++D +ANYV+Q L
Sbjct: 466 KLATQKFGSHVVEKCLRY-YPESRSQIVNELVSVLN----FGYLLQDPYANYVIQCALSK 520
Query: 983 CDDQQLELILNRIKVHLNALKKYTYGKHIVAR 1014
++ +++ + N LK Y K I ++
Sbjct: 521 TKGFVRASLVEKVRRYEN-LKMTPYCKRIFSK 551
Score = 42.0 bits (97), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/109 (22%), Positives = 54/109 (49%), Gaps = 9/109 (8%)
Query: 919 GQIVQMSQQKFASNVIEKCLSFGTPAERQALVNEMLGSIEENEPLQVMMKDQFANYVVQK 978
G + M++ + +++K + G + + E++ ++ E + D F NY++QK
Sbjct: 244 GSVYLMAKDQLGCRLLQKFVDEGNFVDVMIIFKEVINNVIE------LGTDPFGNYLIQK 297
Query: 979 VLETCDDQQLELILNRIKVHLNALKKYT---YGKHIVARVEKLVAAGER 1024
++E C+++Q IL R+ L K + YG +V ++ + V E+
Sbjct: 298 LIEVCNEEQRTQILIRLTSKPGLLVKISINNYGTRVVQKLIETVTTKEQ 346
>sp|Q10238|MPF1_SCHPO Meiotic PUF family protein 1 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=mpf1 PE=4 SV=1
Length = 581
Score = 148 bits (373), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 169/319 (52%), Gaps = 11/319 (3%)
Query: 707 FSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKFFEHGTASQVR 766
F DQ S +QQ+L+ E+ + I+P +++LM + FGN++IQK FE+ T +Q++
Sbjct: 263 FQNDQAASLSLQQQLKNEDIEDNINLINTILPFSVTLMKNKFGNFLIQKCFEYSTEAQLQ 322
Query: 767 ELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKELDGHIMRCVRDQNGNHVIQ 826
+ L HV LS+ +G V+QK++E+ +++EL + + ++ HV Q
Sbjct: 323 SFSYFLKKHVKELSIDAFGSHVLQKSLEIYPERFTNNLIEELIECLPATLMQRHSCHVWQ 382
Query: 827 KCIECVPEDAIQFIVLTFYDQV----VTLSTHPYGCRVIQRVLEHCHDEKTQSIMMDEIL 882
K E + + I F ++ + +S G V+Q + E+C EK + +DEI+
Sbjct: 383 KFFETRRKSLVDGIFDHFNKKMQGKWLQVSVSEMGSLVVQTIFENCK-EKDKRTCLDEII 441
Query: 883 QSVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQIVQMSQQKFASNVIEKCLSFGT 942
++ + Q+GN+V+QH++EHG ++ I+ L ++ S ++AS V+E+ L
Sbjct: 442 NNMDQIICGQWGNWVIQHIIEHGSEPDKQRILNSLLKEVESYSTNRYASKVVERALRVCH 501
Query: 943 PAERQALVNEMLGSIEENEP----LQVMMKDQFANYVVQKVLETCDDQQLELILNRIKVH 998
V E+ + +NE LQ + +Q+ NY+VQ +L+ Q+ L+ +K H
Sbjct: 502 VTFFDRYVKEI--TTPQNELPTIFLQEIASNQYGNYIVQYLLQVATPSQINLMAEHLKKH 559
Query: 999 LNALKKYTYGKHIVARVEK 1017
+ +L+ + YG+ I A VEK
Sbjct: 560 MVSLRGHKYGQRIAALVEK 578
>sp|Q1PFN9|PUM9_ARATH Pumilio homolog 9 OS=Arabidopsis thaliana GN=APUM9 PE=2 SV=1
Length = 564
Score = 146 bits (368), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 98/332 (29%), Positives = 170/332 (51%), Gaps = 24/332 (7%)
Query: 663 VMGPWHSEAGGSLDESFA--SSLLDEFKSNK------TKCFELSEIAGHVVEFSADQYGS 714
++ P+H + G L S+ + L+ + K + EI G V + DQ G
Sbjct: 205 LLSPFHEKVSGKLGASYLEDTVLIGQGSYGKMSPKSNNDLVSMVEIYGSVNLMAKDQIGC 264
Query: 715 RFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKFFEHGTASQVRELADQLTG 774
R +Q+ +E T E ++ I+ + L D FGNY++QK F+ Q + LT
Sbjct: 265 RVLQKLVEEGTFHEAKVILLAIIDHVVELSMDPFGNYIVQKLFDVSDEEQRTLIVSVLTS 324
Query: 775 H---VLTLSLQMYGCRVIQKAIEVVELDQQTQMVKE-LDGHIMRCVRDQNGNHVIQKCIE 830
+ ++ + L YG RV+QK IE V+ QQ +VK L + V+D NGNHVIQ C++
Sbjct: 325 NPRELIRICLNTYGTRVVQKMIETVKTKQQIALVKSGLKPGFLALVKDLNGNHVIQSCLQ 384
Query: 831 CVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEHCHDEKTQSIMMDEILQSVCMLAQ 890
+ + +F++ ++ H +GC V+Q + + + + ++ EI ++ L+Q
Sbjct: 385 TLGPNDNEFVLEAATKYCAEIAIHRHGCCVLQCCISNSVGLQRERLVA-EISRNSLHLSQ 443
Query: 891 DQYGNYVVQHVLEHGKPHERSAI--IKKLTGQIVQMSQQKFASNVIEKCLSFGTPAERQA 948
D +GNYVVQ++++ + SA+ + + +++ QKF+S+VIEKCL P R
Sbjct: 444 DPFGNYVVQYLID----QQVSAVKLLVQFRMHYAELATQKFSSHVIEKCLR-KYPESRAE 498
Query: 949 LVNEMLGSIEENEPLQVMMKDQFANYVVQKVL 980
+V E+L + +++D +ANYV+Q L
Sbjct: 499 IVRELLCV----PNFEYLLQDPYANYVIQTAL 526
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 64/157 (40%), Gaps = 55/157 (35%)
Query: 876 IMMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQIVQMSQQKFASNVIE 935
+ M EI SV ++A+DQ G V+Q ++E G HE I+ + +V++S
Sbjct: 245 VSMVEIYGSVNLMAKDQIGCRVLQKLVEEGTFHEAKVILLAIIDHVVELSM--------- 295
Query: 936 KCLSFGTPAERQALVNEMLGSIEENEPLQVMMKDQFANYVVQKVLETCDDQQLELILN-- 993
D F NY+VQK+ + D++Q LI++
Sbjct: 296 ---------------------------------DPFGNYIVQKLFDVSDEEQRTLIVSVL 322
Query: 994 ------RIKVHLNALKKYTYGKHIVARVEKLVAAGER 1024
I++ LN TYG +V ++ + V ++
Sbjct: 323 TSNPRELIRICLN-----TYGTRVVQKMIETVKTKQQ 354
Score = 33.9 bits (76), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 951 NEMLGSIEENEPLQVMMKDQFANYVVQKVLETCDDQQLELILNRIKVHLNALKKYTYGKH 1010
N+++ +E + +M KDQ V+QK++E + ++IL I H+ L +G +
Sbjct: 242 NDLVSMVEIYGSVNLMAKDQIGCRVLQKLVEEGTFHEAKVILLAIIDHVVELSMDPFGNY 301
Query: 1011 IVARVEKLVAAGERR--ISIMTPHP 1033
IV ++ + +R +S++T +P
Sbjct: 302 IVQKLFDVSDEEQRTLIVSVLTSNP 326
>sp|Q09312|FBF2_CAEEL Fem-3 mRNA-binding factor 2 OS=Caenorhabditis elegans GN=fbf-2 PE=1
SV=1
Length = 632
Score = 139 bits (349), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/336 (28%), Positives = 172/336 (51%), Gaps = 55/336 (16%)
Query: 697 LSEI--AGHVVEFSADQYGSRFIQQKLE-TATTEEKNMVFQEIMPQA---LSLMTDVFGN 750
LSE+ +G +++F+ D+ G +F+++ ++ + T+ +K +F++++ + L L T++FGN
Sbjct: 185 LSEVLDSGDLMKFAVDKTGCQFLEKAVKGSLTSYQKFQLFEQVIGRKDDFLKLSTNIFGN 244
Query: 751 YVIQKFF-------EHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQ 803
Y++Q + G + +L + ++ + + L + CRVIQ +++ ++L +
Sbjct: 245 YLVQSVIGISLATNDDGYTKRQEKLKNFISSQMTDMCLDKFACRVIQSSLQNMDLSLACK 304
Query: 804 MVKEL--DGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVT------LSTHP 855
+V+ L D ++ DQN NHVIQK + +P +FIV D V T + +
Sbjct: 305 LVQALPRDARLIAICVDQNANHVIQKVVAVIPLKNWEFIV----DFVATPEHLRQICSDK 360
Query: 856 YGCRVIQRVLEHCH---------------DEKTQSIMMDEILQSVCMLAQDQYGNYVVQH 900
YGCRV+Q ++E E+ +M + LA ++Y NY++QH
Sbjct: 361 YGCRVVQTIIEKLTADSMNVDLTSAAQNLRERALQRLMTSVTNRCQELATNEYANYIIQH 420
Query: 901 VLEHGK-PHERSAIIKK-LTGQIVQMSQQKFASNVIEKCLSFGTPAERQALVNEMLGSIE 958
++ + R II+K L ++ +SQ+KFAS+V+EK P E L+ EM+ I
Sbjct: 421 IVSNDDLAVYRECIIEKCLMRNLLSLSQEKFASHVVEKAF-LHAPLE---LLAEMMDEIF 476
Query: 959 E---------NEPLQVMMKDQFANYVVQKVLETCDD 985
+ + L +MM QF NYVVQ +L C D
Sbjct: 477 DGYIPHPDTGKDALDIMMFHQFGNYVVQCMLTICCD 512
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 67/143 (46%), Gaps = 14/143 (9%)
Query: 888 LAQDQYGNYVVQHVL-------EHGKPHERSAIIKKLTGQIVQMSQQKFASNVIEKCLSF 940
L+ + +GNY+VQ V+ + G + + ++ Q+ M KFA VI+ L
Sbjct: 237 LSTNIFGNYLVQSVIGISLATNDDGYTKRQEKLKNFISSQMTDMCLDKFACRVIQSSLQ- 295
Query: 941 GTPAERQALVNEMLGSIEENEPLQVMMKDQFANYVVQKVLETCDDQQLELILNRIKV--H 998
+L +++ ++ + L + DQ AN+V+QKV+ + E I++ + H
Sbjct: 296 ---NMDLSLACKLVQALPRDARLIAICVDQNANHVIQKVVAVIPLKNWEFIVDFVATPEH 352
Query: 999 LNALKKYTYGKHIVAR-VEKLVA 1020
L + YG +V +EKL A
Sbjct: 353 LRQICSDKYGCRVVQTIIEKLTA 375
>sp|Q9LP21|PUM10_ARATH Putative pumilio homolog 10 OS=Arabidopsis thaliana GN=APUM10 PE=3
SV=2
Length = 528
Score = 137 bits (346), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 99/323 (30%), Positives = 162/323 (50%), Gaps = 15/323 (4%)
Query: 697 LSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKF 756
+ EI G V + DQ G R +Q+ +E T + ++F EI+ + L D GNY++QK
Sbjct: 211 MVEIYGSVNLMARDQIGCRALQKLVEEGTVLDSKVIFLEIIDHVVELSMDPLGNYIVQKL 270
Query: 757 FEHGTASQVRELADQLTG---HVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKE-LDGHI 812
Q + LT ++ + L G RVIQK I+ V+ QQ +VK L+
Sbjct: 271 LVVSDEEQRTMIVSVLTSKPRELIKICLNTNGTRVIQKMIKTVKTKQQIALVKSALEPGF 330
Query: 813 MRCVRDQNGNHVIQKCIE-CVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEHCHDE 871
+ V D NG HV+Q C+E VP D +F+V + L+TH YGC V+Q L +
Sbjct: 331 LVLVNDSNGYHVLQSCLEFLVPNDN-KFVVEAATEYCAQLATHQYGCYVLQCSLINTVGL 389
Query: 872 KTQSIMMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQIVQMSQQKFAS 931
+ + ++ EI + L+QD +GNYVVQ +++ + ++ ++++ QKF+S
Sbjct: 390 QHER-LVAEISRDSLRLSQDPFGNYVVQCLID--QQVSSVNLLLPFRTHCIELATQKFSS 446
Query: 932 NVIEKCLSFGTPAERQALVNEMLGSIEENEPLQVMMKDQFANYVVQKVLETCDDQQLELI 991
+VIEKCL P R +V E+L + +++D +ANYV+Q L +
Sbjct: 447 HVIEKCLR-KYPESRAEIVRELLSY----PNFEQLLQDPYANYVIQTALSVTKGAVRARL 501
Query: 992 LNRIKVHLNALKKYTYGKHIVAR 1014
+ ++K L+ Y K I ++
Sbjct: 502 VEKVK-RFGKLQSNPYCKKIFSK 523
Score = 33.5 bits (75), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 25/117 (21%), Positives = 55/117 (47%), Gaps = 19/117 (16%)
Query: 916 KLTGQIVQMSQQKFASNVIEKCLSFGTPAERQALVNEMLGSIEENEPLQVMMKDQFANYV 975
++ G + M++ + ++K + GT + + + E++ + E + D NY+
Sbjct: 213 EIYGSVNLMARDQIGCRALQKLVEEGTVLDSKVIFLEIIDHVVE------LSMDPLGNYI 266
Query: 976 VQKVLETCDDQQLELILN--------RIKVHLNALKKYTYGKHIVARVEKLVAAGER 1024
VQK+L D++Q +I++ IK+ LN T G ++ ++ K V ++
Sbjct: 267 VQKLLVVSDEEQRTMIVSVLTSKPRELIKICLN-----TNGTRVIQKMIKTVKTKQQ 318
>sp|Q9N5M6|FBF1_CAEEL Fem-3 mRNA-binding factor 1 OS=Caenorhabditis elegans GN=fbf-1 PE=1
SV=1
Length = 614
Score = 136 bits (343), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 96/337 (28%), Positives = 172/337 (51%), Gaps = 57/337 (16%)
Query: 697 LSEI--AGHVVEFSADQYGSRFIQQKLE-TATTEEKNMVFQEIMPQA---LSLMTDVFGN 750
LSE+ +G +++F+ D+ G +F+++ ++ + T+ +K +F++++ + L L T++FGN
Sbjct: 183 LSEVLDSGDLMKFAVDKTGCQFLEKAVKGSLTSYQKFQLFEQVIGRKDDFLKLSTNIFGN 242
Query: 751 YVIQKF-------FEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQ 803
Y +Q+ ++ + +L + ++ + + L + CRVIQ +++ ++L +
Sbjct: 243 YFVQEIIGMSLTTYDDDNIKRQEKLKNFISSQMTDMCLDKFACRVIQSSLQNMDLSLACK 302
Query: 804 MVKEL--DGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVT------LSTHP 855
+V+ L D ++ DQN NHVIQK + +P +FIV D V T +
Sbjct: 303 LVQALPRDARLIAICVDQNANHVIQKVVAVIPLKNWEFIV----DFVATPEHLRQICFDK 358
Query: 856 YGCRVIQRVLE----------------HCHDEKTQSIMMDEILQSVCMLAQDQYGNYVVQ 899
YGCRV+Q ++E H + Q +M + LA ++Y NY++Q
Sbjct: 359 YGCRVVQTIIEKLTADSINVDLTSAAQHLRERALQRLMT-SVTNRCQELATNEYANYIIQ 417
Query: 900 HVLEHGK-PHERSAIIKK-LTGQIVQMSQQKFASNVIEKCLSFGTPAERQALVNEMLGSI 957
H++ + R II+K L ++ +SQ+KFAS+V+EK P E L+ EM+ I
Sbjct: 418 HIVSNDDLAVYRECIIEKCLMRNLLSLSQEKFASHVVEKAF-LHAPME---LLAEMMDEI 473
Query: 958 EE---------NEPLQVMMKDQFANYVVQKVLETCDD 985
+ + L +MM QF NYVVQ +L C D
Sbjct: 474 FDGYMPHPGTGKDALDIMMFHQFGNYVVQCMLTICCD 510
Score = 42.0 bits (97), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 65/143 (45%), Gaps = 14/143 (9%)
Query: 888 LAQDQYGNYVVQHVLEHGKPHERSAIIKK-------LTGQIVQMSQQKFASNVIEKCLSF 940
L+ + +GNY VQ ++ IK+ ++ Q+ M KFA VI+ L
Sbjct: 235 LSTNIFGNYFVQEIIGMSLTTYDDDNIKRQEKLKNFISSQMTDMCLDKFACRVIQSSLQ- 293
Query: 941 GTPAERQALVNEMLGSIEENEPLQVMMKDQFANYVVQKVLETCDDQQLELILNRIKV--H 998
+L +++ ++ + L + DQ AN+V+QKV+ + E I++ + H
Sbjct: 294 ---NMDLSLACKLVQALPRDARLIAICVDQNANHVIQKVVAVIPLKNWEFIVDFVATPEH 350
Query: 999 LNALKKYTYGKHIVAR-VEKLVA 1020
L + YG +V +EKL A
Sbjct: 351 LRQICFDKYGCRVVQTIIEKLTA 373
>sp|Q9FMH4|PUM13_ARATH Putative pumilio homolog 13 OS=Arabidopsis thaliana GN=APUM13 PE=3
SV=1
Length = 527
Score = 90.5 bits (223), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/362 (19%), Positives = 156/362 (43%), Gaps = 28/362 (7%)
Query: 662 GVMGPWHSEAGGSLDESFASSLLDEFKSNKTKCFELSEIAGHVVEFSADQYGSRFIQQKL 721
GV W S G + ++ A+S ++ + G + D+ S+ +++ +
Sbjct: 184 GVNNSWRSNEGCTYNQDQAASSMENGR-------------GSYFSIATDRVWSKELEKTI 230
Query: 722 ETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKFFEHGTASQVRELADQLTGHV---LT 778
T E +M+F ++ LM D FGN V++ ++ Q+ + D +T H+ +
Sbjct: 231 FVGTKETIDMIFDGLIVGICELMVDPFGNDVVKLLIGKCSSEQIILIVDVVTRHISKFVN 290
Query: 779 LSLQMYGCRVIQKAIEVVELDQQTQMVKELDGH---IMRCVRDQNGNHVIQKCIECVPED 835
+ G IQ + + Q+ + +D ++ R+ N +VI C
Sbjct: 291 ICFNPIGTLAIQVLLTSIHERANNQIPRIMDAISSVALQLTRNTNAKYVILACFRMFTSS 350
Query: 836 AIQFIVLTFYDQVVTLSTHPYGCRVIQRVL--EHCHDEKTQSIMMDEILQSVCMLAQDQY 893
+ ++ ++ GC ++Q+ E + + + ++ E+++ L + +
Sbjct: 351 QCRRLLEVVSQHCYQIAIDQNGCCLLQQCFDKERVPNHEIRQRLISEVIEHALKLCLNCH 410
Query: 894 GNYVVQHVLEHGKPHERSAIIKKLTGQIVQMSQQKFASNVIEKCLSFGTPAERQALVNEM 953
GNYVVQ+V+E HE ++ KL +++ K+ S+V++K L + +V+ +
Sbjct: 411 GNYVVQYVVELDNQHETDLLVNKLLRNYAHLARNKYGSHVVQKLLKLRGIDSKLIVVDLL 470
Query: 954 LGSIEENEPLQVMMKDQFANYVVQKVLETCDDQQLELILNRIKVHLNALKKYTYGKHIVA 1013
G + ++ D F NYV+Q + +++ I+ ++ ++ +G I+
Sbjct: 471 RG-------IDTLLLDPFGNYVIQTAWFVSKEDVRQMLRYYIERNIRLMRCNKFGNKILE 523
Query: 1014 RV 1015
++
Sbjct: 524 KL 525
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 94/219 (42%), Gaps = 14/219 (6%)
Query: 818 DQNGNHVIQKCI-ECVPEDAIQFI--VLTFYDQVVTLSTHPYGCRVIQRVLEHCHDEKTQ 874
D GN V++ I +C E I + V + V + +P G IQ +L H+
Sbjct: 255 DPFGNDVVKLLIGKCSSEQIILIVDVVTRHISKFVNICFNPIGTLAIQVLLTSIHERANN 314
Query: 875 SI--MMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQIVQMSQQKFASN 932
I +MD I L ++ YV+ + +++ ++ Q++ +
Sbjct: 315 QIPRIMDAISSVALQLTRNTNAKYVILACFRMFTSSQCRRLLEVVSQHCYQIAIDQNGCC 374
Query: 933 VIEKCLS---FGTPAERQALVNEMLGSIEENEPLQVMMKDQFANYVVQKVLETCDDQQLE 989
++++C RQ L++E++ E + + NYVVQ V+E + + +
Sbjct: 375 LLQQCFDKERVPNHEIRQRLISEVI------EHALKLCLNCHGNYVVQYVVELDNQHETD 428
Query: 990 LILNRIKVHLNALKKYTYGKHIVARVEKLVAAGERRISI 1028
L++N++ + L + YG H+V ++ KL + I +
Sbjct: 429 LLVNKLLRNYAHLARNKYGSHVVQKLLKLRGIDSKLIVV 467
>sp|Q9P789|YN8E_SCHPO Pumilio domain-containing protein P35G2.14 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPBP35G2.14 PE=1 SV=2
Length = 1065
Score = 73.6 bits (179), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/303 (20%), Positives = 131/303 (43%), Gaps = 20/303 (6%)
Query: 696 ELSEIAGHVVEFSADQYGSRFIQQKLET---------ATTEEKNMVFQEIMPQALSLMTD 746
EL++ A + S R KL T EE + + + L +D
Sbjct: 725 ELTDFAAQIPSISKAFSSRRLNAPKLRQVRKRIDNGLCTQEEVEDIAINWLDEVSDLSSD 784
Query: 747 VFGNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMV- 805
GN V+QK F++ + + +++ H+ + + G QK ++V + Q +++
Sbjct: 785 HLGNTVVQKLFDYCSDPVKEMMLERIAPHLAQIGIHKNGTWAAQKIVDVASTEAQMRLIA 844
Query: 806 KELDGHIMRCVRDQNGNHVIQKCIEC-VPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRV 864
K L +I DQ GN+V+Q C++ P + F+ +Q ++ YG R ++
Sbjct: 845 KHLQPYIPLLFADQFGNYVVQTCLKFGAPMN--DFVFEAILNQFWVIAQSRYGSRAVRAC 902
Query: 865 LEHCHDEKTQSIMMDEILQSVCM-LAQDQYGNYVVQHVLEH-GKPHERSAIIKKLTGQIV 922
LE + Q +++ + + LA + G ++ +++E+ PH + ++ IV
Sbjct: 903 LESPDVTEEQRVLVAAAITVYSVHLAMNGNGTLLLTYLVENMNYPHIPILLTRRFVQDIV 962
Query: 923 QMSQQKFASNVIEKCLSF--GTPAERQALVNEMLGS---IEENEPLQVMMKDQFANYVVQ 977
++ + A N + K +S G A +V+ +L + + N +++ + + +
Sbjct: 963 RVCTHRLAYNSLLKIISISQGDTACGDLVVDAILDTQNDLNPNSLEKILFEQTYGPSFIC 1022
Query: 978 KVL 980
K+L
Sbjct: 1023 KLL 1025
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 76/166 (45%), Gaps = 16/166 (9%)
Query: 868 CHDEKTQSIMMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQIVQMSQQ 927
C E+ + I ++ L V L+ D GN VVQ + ++ + +++++ + Q+
Sbjct: 762 CTQEEVEDIAIN-WLDEVSDLSSDHLGNTVVQKLFDYCSDPVKEMMLERIAPHLAQIGIH 820
Query: 928 KFASNVIEKCLSFGTPAERQALVNEMLGSIEENEP-LQVMMKDQFANYVVQKVLE---TC 983
K + +K + + + L+ + L +P + ++ DQF NYVVQ L+
Sbjct: 821 KNGTWAAQKIVDVASTEAQMRLIAKHL------QPYIPLLFADQFGNYVVQTCLKFGAPM 874
Query: 984 DDQQLELILNRIKVHLNALKKYTYGKHIV-ARVEKLVAAGERRISI 1028
+D E ILN+ V + + YG V A +E E+R+ +
Sbjct: 875 NDFVFEAILNQFWV----IAQSRYGSRAVRACLESPDVTEEQRVLV 916
Score = 37.0 bits (84), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 966 MMKDQFANYVVQKVLETCDDQQLELILNRIKVHLNALKKYTYGKHIVARVEKLVAAGERR 1025
+ D N VVQK+ + C D E++L RI HL + + G ++ VA+ E +
Sbjct: 781 LSSDHLGNTVVQKLFDYCSDPVKEMMLERIAPHLAQIGIHKNGTWAAQKIVD-VASTEAQ 839
Query: 1026 ISIMTPH 1032
+ ++ H
Sbjct: 840 MRLIAKH 846
>sp|Q4PSD1|PUM14_ARATH Pumilio homolog 14 OS=Arabidopsis thaliana GN=APUM14 PE=2 SV=1
Length = 518
Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/332 (19%), Positives = 146/332 (43%), Gaps = 22/332 (6%)
Query: 695 FELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQ 754
F+ ++ F+ D+ S + + T E + ++ ++ LM D +G+ V+Q
Sbjct: 196 FDYNQCQASFSAFAKDKEMSERLGMSIFQGTKETVDAIYNGLIGDICELMVDPYGSDVVQ 255
Query: 755 KFFEHGTASQVRELADQLTGHV---LTLSLQMYGCRVIQKAIEVVELDQQTQMVKELDGH 811
++ Q+ +L D +T + + + + G IQ + + + Q+ + +D
Sbjct: 256 LLMRRCSSEQIVQLVDIVTQQMFQFVNICIDSLGTNAIQVLLTCINERAKDQIPRIVD-- 313
Query: 812 IMRCVRDQ--NGNH---VIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLE 866
++R V Q NH VI C P + ++ ++ +GC ++Q
Sbjct: 314 VVRTVALQLSKSNHAIFVILACFRLFPLHC-RLLLELIVQNCHQIAIDQHGCCLLQLCFN 372
Query: 867 HCHD---EKTQSIMMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQIVQ 923
E Q ++M+ I ++ L + YGNYVVQ+++E + A++++L G
Sbjct: 373 KDRVPNLEIRQRLIMEAIANAL-RLCLNCYGNYVVQYIVELNNRYLIDALVRQLIGNYAH 431
Query: 924 MSQQKFASNVIEKCLSFGTPAERQALVNEMLGSIEENEPLQVMMKDQFANYVVQKVLETC 983
+++ K+ S+ ++K L R +V ++L I+ ++ D F NYV+Q
Sbjct: 432 LARNKYGSHAVQKLLKLRWIDSR-VIVIDLLREID------TLLLDPFGNYVIQTAWFVS 484
Query: 984 DDQQLELILNRIKVHLNALKKYTYGKHIVARV 1015
D ++ I+ ++ ++ +G ++ ++
Sbjct: 485 KDDVRRMLRYHIERNIPMMRCNKFGNKVLEKL 516
>sp|P47135|JSN1_YEAST Protein JSN1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=JSN1 PE=1 SV=1
Length = 1091
Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 120/251 (47%), Gaps = 16/251 (6%)
Query: 743 LMTDVFGNYVIQKFFEHGTASQVRELADQLTGHVLT-LSLQMYGCRVIQKAIEVVELDQQ 801
L +D GN ++QK FEH ++ ++++ + T LT + + G QK I + +Q
Sbjct: 625 LSSDYLGNTIVQKLFEH-SSDIIKDIMLRKTSKYLTSMGVHKNGTWACQKMITMAHTPRQ 683
Query: 802 T-QMVKELDGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRV 860
Q+ + + + + DQ GN+VIQ C+ QFI + + + YG R
Sbjct: 684 IMQVTQGVKDYCTPLINDQFGNYVIQ-CVLKFGFPWNQFIFESIIANFWVIVQNRYGARA 742
Query: 861 IQRVLEHCHDEKT--QSIMMDEILQSVC-MLAQDQYGNYVVQHVLEHGK-PHERSAIIKK 916
++ LE HD T QSI++ ++ + L+ + G +V L+ P+ S + +
Sbjct: 743 VRACLE-AHDIVTPEQSIVLSAMIVTYAEYLSTNSNGALLVTWFLDTSVLPNRHSILAPR 801
Query: 917 LTGQIVQMSQQKFASNVIEKCLSF-GTPAERQALVNEMLGSIEEN------EPLQVMMKD 969
LT +IV++ + AS I K L++ G R+ +++ + G++ + E +++ +
Sbjct: 802 LTKRIVELCGHRLASLTILKVLNYRGDDNARKIILDSLFGNVNAHDSSPPKELTKLLCET 861
Query: 970 QFANYVVQKVL 980
+ V KVL
Sbjct: 862 NYGPTFVHKVL 872
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/273 (19%), Positives = 110/273 (40%), Gaps = 20/273 (7%)
Query: 684 LDEFKSNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNM-VFQEIMPQALS 742
L E S+ K L + + ++ + G+ Q+ + A T + M V Q +
Sbjct: 638 LFEHSSDIIKDIMLRKTSKYLTSMGVHKNGTWACQKMITMAHTPRQIMQVTQGVKDYCTP 697
Query: 743 LMTDVFGNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIE---VVELD 799
L+ D FGNYVIQ + G + + + + + + YG R ++ +E +V +
Sbjct: 698 LINDQFGNYVIQCVLKFGFPWN-QFIFESIIANFWVIVQNRYGARAVRACLEAHDIVTPE 756
Query: 800 QQTQMVKELDGHIMRCVRDQNGNHVIQKCIEC-VPEDAIQFIVLTFYDQVVTLSTHPYGC 858
Q + + + + NG ++ ++ V + + ++V L H
Sbjct: 757 QSIVLSAMIVTYAEYLSTNSNGALLVTWFLDTSVLPNRHSILAPRLTKRIVELCGHRLAS 816
Query: 859 RVIQRVLEHCHDEKTQSIMMDEILQSVC------------MLAQDQYGNYVVQHVLEHGK 906
I +VL + D+ + I++D + +V +L + YG V VL
Sbjct: 817 LTILKVLNYRGDDNARKIILDSLFGNVNAHDSSPPKELTKLLCETNYGPTFVHKVLAMPL 876
Query: 907 PHE--RSAIIKKLTGQIVQMSQQKFASNVIEKC 937
+ R+ IIK++ + +Q + + ++E+
Sbjct: 877 LEDDLRAHIIKQVRKVLTDSTQIQPSRRLLEEV 909
Score = 41.2 bits (95), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 53/106 (50%), Gaps = 11/106 (10%)
Query: 877 MMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQIVQMSQQKFASNVIEK 936
M+DE+ + L+ D GN +VQ + EH + +++K + + M K + +K
Sbjct: 618 MLDELPE----LSSDYLGNTIVQKLFEHSSDIIKDIMLRKTSKYLTSMGVHKNGTWACQK 673
Query: 937 CLSFG-TPAERQALVNEMLGSIEENEPLQVMMKDQFANYVVQKVLE 981
++ TP RQ ++ G + PL + DQF NYV+Q VL+
Sbjct: 674 MITMAHTP--RQ-IMQVTQGVKDYCTPL---INDQFGNYVIQCVLK 713
>sp|O60059|YG58_SCHPO Pumilio domain-containing protein C56F2.08c OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPBC56F2.08c PE=1 SV=1
Length = 661
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 134/295 (45%), Gaps = 12/295 (4%)
Query: 725 TTEEKNMVFQEIMPQALSLMTDVFGNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMY 784
T EE ++ + ++ L +D GN V+QKFFE+ + + +++ ++ + +
Sbjct: 181 TQEEIEVIARSMLDDVAELSSDYLGNTVVQKFFEYCSDPIKEAMLERIAPYLAAIGIHKN 240
Query: 785 GCRVIQKAIEVVELDQQTQM-VKELDGHIMRCVRDQNGNHVIQKCIEC-VPEDAIQFIVL 842
G QK I+V ++Q + VK L + DQ GN+V Q C+ P++ F V+
Sbjct: 241 GTWAAQKIIDVASTEKQMDLIVKHLRPYTALLYFDQFGNYVAQCCLRFKYPKNTFLFEVM 300
Query: 843 TFYDQVVTLSTHPYGCRVIQRVLEHCHDE-KTQSIMMDEILQSVCMLAQDQYGNYVVQHV 901
+ +G R I+ LE+ + + Q++++ I+ + +LA + G ++ +
Sbjct: 301 A--RHCCEIGQSRFGARAIRACLENENATFEQQALVVASIIINSHLLATNSNGMLLLTWL 358
Query: 902 LEHGKPHERSAIIK-KLTGQIVQMSQQKFASNVIEKCLSFGTPAERQALVNEMLGSIEEN 960
L++ R ++ L + K AS +I K ++ E + L+ + L E++
Sbjct: 359 LDNSFFRNRHRLLAIHLATHLHTTCTHKLASTLIFKLINNKQEPESRNLLLKNLFFSEKD 418
Query: 961 EPLQVMMKDQFAN-YVVQKVLETCDD-----QQLELILNRIKVHLNALKKYTYGK 1009
L +++DQ + KV+ Q L++ R+ ++++A Y +
Sbjct: 419 NVLTYILQDQAVGPSFIHKVITYPSIGREFLAQFHLVIKRVLINIHAQPNAVYCR 473
>sp|Q9LXC5|PUM21_ARATH Putative pumilio homolog 21 OS=Arabidopsis thaliana GN=APUM21 PE=3
SV=1
Length = 517
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 89/189 (47%), Gaps = 14/189 (7%)
Query: 808 LDGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEH 867
+D + + D+ G +I I V + + + Y+ + L+ GC + VL+
Sbjct: 294 VDTNFFLLMSDKYGRGLIIPAIRAVDKTKKESLYKLTYEYTLHLARLETGCLALNNVLQ- 352
Query: 868 CHDEKTQSIMMDEILQSVC----MLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQIVQ 923
+ + I D I + V L+ D YG +VVQ++L P +AI ++L G +
Sbjct: 353 ----EIRGIYRDLIFECVANNADWLSFDPYGTHVVQNILILQNPVATTAIAERLRGSFFR 408
Query: 924 MSQQKFASNVIEKCLSFGTPAERQALVNEMLGSIEENEPLQVMMKDQFANYVVQKVLETC 983
++ ++ S V+EKCL + R ++ E G+ +E M D+F N+VVQ L
Sbjct: 409 LAMERQGSYVVEKCLK--SDFARDQVLEEFRGNAKE---WVRMTTDKFGNFVVQSALRVM 463
Query: 984 DDQQLELIL 992
++++ +L
Sbjct: 464 KEKEMRPLL 472
Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/123 (21%), Positives = 61/123 (49%), Gaps = 5/123 (4%)
Query: 729 KNMVFQEIMPQALSLMTDVFGNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRV 788
++++F+ + A L D +G +V+Q +A++L G L+++ G V
Sbjct: 359 RDLIFECVANNADWLSFDPYGTHVVQNILILQNPVATTAIAERLRGSFFRLAMERQGSYV 418
Query: 789 IQKAIEVVELDQQTQMVKELDGHIMRCVR---DQNGNHVIQKCIECVPEDAIQFIVLTFY 845
++K ++ + Q+++E G+ VR D+ GN V+Q + + E ++ ++ F
Sbjct: 419 VEKCLK--SDFARDQVLEEFRGNAKEWVRMTTDKFGNFVVQSALRVMKEKEMRPLLREFV 476
Query: 846 DQV 848
+++
Sbjct: 477 EKL 479
Score = 37.0 bits (84), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 51/111 (45%), Gaps = 8/111 (7%)
Query: 779 LSLQMYGCRVIQKAIEVVELDQQTQMVKELDGHIMRCVRDQNGNHVIQKCIECVPEDAIQ 838
LS YG V+Q + + T + + L G R ++ G++V++KC++ D +
Sbjct: 373 LSFDPYGTHVVQNILILQNPVATTAIAERLRGSFFRLAMERQGSYVVEKCLKS---DFAR 429
Query: 839 FIVLTFY----DQVVTLSTHPYGCRVIQRVLEHCHDEKTQSIMMDEILQSV 885
VL + + V ++T +G V+Q L EK ++ E ++ +
Sbjct: 430 DQVLEEFRGNAKEWVRMTTDKFGNFVVQSALR-VMKEKEMRPLLREFVEKL 479
>sp|Q9FIE9|PUM16_ARATH Putative pumilio homolog 16 OS=Arabidopsis thaliana GN=APUM16 PE=3
SV=2
Length = 332
Score = 65.9 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 41/145 (28%), Positives = 74/145 (51%), Gaps = 7/145 (4%)
Query: 845 YDQVVT----LSTHPYGCRVIQRVLEHCHDEKTQSIMMDEILQSVCMLAQDQYGNYVVQH 900
YDQ++ L+ YGC + ++ D + ++D + + +L+ D YGN+VVQH
Sbjct: 151 YDQILRYACFLAGDQYGCIALNEIITDLDDPYYRDQLLDIVANNALLLSNDAYGNFVVQH 210
Query: 901 VLEHGKPHERSAIIKKLTGQIVQMSQQKFASNVIEKCLSFGTPAERQALVNEMLGSIEEN 960
VL+ I KL G V++S +K+ S ++E+ L G +V ++L +
Sbjct: 211 VLKLRDSRCTRNIADKLCGYCVELSFKKYGSYIVERLLEAGD-VPMATVVLDLLAC--KT 267
Query: 961 EPLQVMMKDQFANYVVQKVLETCDD 985
E L + + ++ N+VV K LE ++
Sbjct: 268 EMLIRLARSEYGNFVVCKALELTNE 292
Score = 53.5 bits (127), Expect = 8e-06, Method: Composition-based stats.
Identities = 48/202 (23%), Positives = 93/202 (46%), Gaps = 10/202 (4%)
Query: 708 SADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKFFEHGTASQVRE 767
+ ++ GS+ +Q KL + + F+ IM + +MTD + +YV + +
Sbjct: 91 TTNKNGSKTLQ-KLMGMSDDMDVFFFEAIMRLFIHVMTDKYASYVTIQGMRVFQQDKREL 149
Query: 768 LADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQ---QTQMVKELDGHIMRCVRDQNGNHV 824
+ DQ+ + L+ YGC + + I +LD + Q++ + + + D GN V
Sbjct: 150 MYDQILRYACFLAGDQYGCIALNEII--TDLDDPYYRDQLLDIVANNALLLSNDAYGNFV 207
Query: 825 IQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEHCHDEKTQSIMMDEI--- 881
+Q ++ + I V LS YG +++R+LE D ++++D +
Sbjct: 208 VQHVLKLRDSRCTRNIADKLCGYCVELSFKKYGSYIVERLLE-AGDVPMATVVLDLLACK 266
Query: 882 LQSVCMLAQDQYGNYVVQHVLE 903
+ + LA+ +YGN+VV LE
Sbjct: 267 TEMLIRLARSEYGNFVVCKALE 288
Score = 52.4 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/132 (24%), Positives = 65/132 (49%), Gaps = 4/132 (3%)
Query: 707 FSADQYGSRFIQQKL-ETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKFFEHGTASQV 765
+ DQYG + + + + ++ + + AL L D +GN+V+Q + +
Sbjct: 161 LAGDQYGCIALNEIITDLDDPYYRDQLLDIVANNALLLSNDAYGNFVVQHVLKLRDSRCT 220
Query: 766 RELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKEL---DGHIMRCVRDQNGN 822
R +AD+L G+ + LS + YG ++++ +E ++ T ++ L ++R R + GN
Sbjct: 221 RNIADKLCGYCVELSFKKYGSYIVERLLEAGDVPMATVVLDLLACKTEMLIRLARSEYGN 280
Query: 823 HVIQKCIECVPE 834
V+ K +E E
Sbjct: 281 FVVCKALELTNE 292
Score = 38.5 bits (88), Expect = 0.28, Method: Composition-based stats.
Identities = 50/226 (22%), Positives = 87/226 (38%), Gaps = 59/226 (26%)
Query: 804 MVKELDGHIMRCVRDQNGNHVIQKCIECVPEDAIQFI--VLTFYDQVVTLSTHPY----G 857
M + D + M ++NG+ +QK + + + F ++ + V+T Y G
Sbjct: 80 MTSDCD-YFMVITTNKNGSKTLQKLMGMSDDMDVFFFEAIMRLFIHVMTDKYASYVTIQG 138
Query: 858 CRVIQRVLEHCHDEKTQSIMMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKL 917
RV Q + + +M D+IL+ C LA DQYG + ++
Sbjct: 139 MRVFQ--------QDKRELMYDQILRYACFLAGDQYGCIALNEIIT-------------- 176
Query: 918 TGQIVQMSQQKFASNVIEKCLSFGTPAERQALVNEMLGSIEENEPLQVMMKDQFANYVVQ 977
P R L++ I N L ++ D + N+VVQ
Sbjct: 177 ---------------------DLDDPYYRDQLLD-----IVANNAL-LLSNDAYGNFVVQ 209
Query: 978 KVLETCDDQQLELILNRIKVHLNALKKYTYGKHIVARVEKLVAAGE 1023
VL+ D + I +++ + L YG +I VE+L+ AG+
Sbjct: 210 HVLKLRDSRCTRNIADKLCGYCVELSFKKYGSYI---VERLLEAGD 252
Score = 33.5 bits (75), Expect = 8.8, Method: Composition-based stats.
Identities = 24/102 (23%), Positives = 49/102 (48%), Gaps = 3/102 (2%)
Query: 697 LSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKF 756
L +A + + S D YG+ +Q L+ + + ++ + L +G+Y++++
Sbjct: 188 LDIVANNALLLSNDAYGNFVVQHVLKLRDSRCTRNIADKLCGYCVELSFKKYGSYIVERL 247
Query: 757 FEHG---TASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEV 795
E G A+ V +L T ++ L+ YG V+ KA+E+
Sbjct: 248 LEAGDVPMATVVLDLLACKTEMLIRLARSEYGNFVVCKALEL 289
>sp|O81465|PUM15_ARATH Pumilio homolog 15 OS=Arabidopsis thaliana GN=APUM15 PE=3 SV=1
Length = 477
Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 120/278 (43%), Gaps = 22/278 (7%)
Query: 714 SRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKFFEHGTASQVRELADQLT 773
S +Q + E + +F ++ LM D +G+ V +K E T Q+ + D +
Sbjct: 165 SHMLQYVIAKGLKETIDKIFDNLISHVCELMLDYYGHKVFRKLMEKCTDEQITRVLDIVL 224
Query: 774 ---GHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKELDGHI-MRCVRDQNGNHVIQKCI 829
+ L + +G IQ + + ++Q E ++ + +D + VI C
Sbjct: 225 EEPFEFVRLCVHTHGTHAIQGLMRSLCSEEQISRFMETLCYVSLLLTKDVIAHRVILFCF 284
Query: 830 ECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEHCHDEKTQSIMMDEILQSVCMLA 889
++++ ++ GC ++++++ E + ++ EI+ L
Sbjct: 285 NQFSPSHTRYLLEVIVQNCYQVAIDQNGCCMLKKLIRQSSRE-LRDPLIKEIISIAVRLC 343
Query: 890 QDQYG----------NYVVQHVLEHGKPHERSAIIKKLTGQIVQMSQQKFASNVIEKCLS 939
+ YG NYVVQ++L SA+ K L G VQ+S K+ S+V++KCL
Sbjct: 344 GNCYGTLTPKSLLVRNYVVQYLLRLKDYEVTSALSKHLDGNYVQLSYDKYGSHVVQKCLE 403
Query: 940 FGTPAERQALVNEMLGSIEENEPLQVMMKDQFANYVVQ 977
+ R+ ++ E+L I+ ++ D + +YV+Q
Sbjct: 404 SREFSSRR-IIAELLSDIDS------LLVDPYGDYVIQ 434
Score = 40.0 bits (92), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 111/285 (38%), Gaps = 51/285 (17%)
Query: 751 YVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQ---MVKE 807
YVI K G + ++ D L HV L L YG +V +K +E +Q T+ +V E
Sbjct: 170 YVIAK----GLKETIDKIFDNLISHVCELMLDYYGHKVFRKLMEKCTDEQITRVLDIVLE 225
Query: 808 LDGHIMRCVRDQNGNHVIQKCIE--CVPEDAIQFI-VLTFYDQVVTLSTHPYGCRVIQRV 864
+R +G H IQ + C E +F+ L + ++T + RV
Sbjct: 226 EPFEFVRLCVHTHGTHAIQGLMRSLCSEEQISRFMETLCYVSLLLTKDV------IAHRV 279
Query: 865 LEHCHDEKTQS---IMMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQI 921
+ C ++ + S +++ I+Q+ +A DQ G +++ ++ R +IK++
Sbjct: 280 ILFCFNQFSPSHTRYLLEVIVQNCYQVAIDQNGCCMLKKLIRQSSRELRDPLIKEIISIA 339
Query: 922 VQMSQQKFASNVIEKCLSFGTPAERQALVNEMLGSIEENEPLQVMMKDQFANYVVQKVLE 981
V++ +GT + LV NYVVQ +L
Sbjct: 340 VRLCGN-----------CYGTLTPKSLLVR---------------------NYVVQYLLR 367
Query: 982 TCDDQQLELILNRIKVHLNALKKYTYGKHIVARVEKLVAAGERRI 1026
D + + + + L YG H+V + + RRI
Sbjct: 368 LKDYEVTSALSKHLDGNYVQLSYDKYGSHVVQKCLESREFSSRRI 412
Score = 38.9 bits (89), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 50/250 (20%), Positives = 92/250 (36%), Gaps = 52/250 (20%)
Query: 700 IAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQ-------------------- 739
+ HV E D YG + ++ +E T E+ V ++ +
Sbjct: 187 LISHVCELMLDYYGHKVFRKLMEKCTDEQITRVLDIVLEEPFEFVRLCVHTHGTHAIQGL 246
Query: 740 --------------------ALSLMTDVFGNYVIQKFFEHGTASQVRELADQLTGHVLTL 779
+L L DV + VI F + S R L + + + +
Sbjct: 247 MRSLCSEEQISRFMETLCYVSLLLTKDVIAHRVILFCFNQFSPSHTRYLLEVIVQNCYQV 306
Query: 780 SLQMYGCRVIQKAIEVVELDQQTQMVKELDGHIMRCVRDQNG----------NHVIQKCI 829
++ GC +++K I + + ++KE+ +R + G N+V+Q +
Sbjct: 307 AIDQNGCCMLKKLIRQSSRELRDPLIKEIISIAVRLCGNCYGTLTPKSLLVRNYVVQYLL 366
Query: 830 ECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEHCHDEKTQSIMMDEILQSVCMLA 889
+ + V LS YG V+Q+ LE E + ++ E+L + L
Sbjct: 367 RLKDYEVTSALSKHLDGNYVQLSYDKYGSHVVQKCLE--SREFSSRRIIAELLSDIDSLL 424
Query: 890 QDQYGNYVVQ 899
D YG+YV+Q
Sbjct: 425 VDPYGDYVIQ 434
>sp|Q9C8B8|PUM17_ARATH Putative pumilio homolog 17 OS=Arabidopsis thaliana GN=APUM17 PE=5
SV=2
Length = 332
Score = 63.5 bits (153), Expect = 8e-09, Method: Composition-based stats.
Identities = 48/186 (25%), Positives = 87/186 (46%), Gaps = 10/186 (5%)
Query: 845 YDQVVT----LSTHPYGCRVIQRVLEHCHDEKTQSIMMDEILQSVCMLAQDQYGNYVVQH 900
YD ++ L+ YGC + +++ D + +MD + + +L+ D YGN+VVQH
Sbjct: 151 YDHILRYALFLARDQYGCIALNEIIKELDDPYYRDELMDIVSNNALLLSNDAYGNFVVQH 210
Query: 901 VLEHGKPHERSAIIKKLTGQIVQMSQQKFASNVIEKCLSFGTPAERQALVNEMLGSIEEN 960
VL+ I KL G V++S +K+ S ++E+ L +V ++L +
Sbjct: 211 VLKLHDSRCTGNIADKLCGYCVELSFKKYGSYIVERLLEV-RDIPMATIVLDLLAC--KT 267
Query: 961 EPLQVMMKDQFANYVVQKVLETCDDQQLELILNRIKVHLNALKKYTYGKHIVARVEKLVA 1020
E L + + + N+VV K+LE +D L + +N L+ Y + H + +
Sbjct: 268 EMLIRLARSENGNFVVCKLLELTNDI---LTADLFYSLVNKLRPYRFLLHRFPESKIVAI 324
Query: 1021 AGERRI 1026
G R+
Sbjct: 325 LGSMRV 330
Score = 53.9 bits (128), Expect = 6e-06, Method: Composition-based stats.
Identities = 37/148 (25%), Positives = 73/148 (49%), Gaps = 5/148 (3%)
Query: 687 FKSNKTKCFELSEIAGHVVEFSADQYGSRFIQQKL-ETATTEEKNMVFQEIMPQALSLMT 745
FK +K + I + + + DQYG + + + E ++ + + AL L
Sbjct: 142 FKQDKRELM-YDHILRYALFLARDQYGCIALNEIIKELDDPYYRDELMDIVSNNALLLSN 200
Query: 746 DVFGNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMV 805
D +GN+V+Q + + +AD+L G+ + LS + YG ++++ +EV ++ T ++
Sbjct: 201 DAYGNFVVQHVLKLHDSRCTGNIADKLCGYCVELSFKKYGSYIVERLLEVRDIPMATIVL 260
Query: 806 KEL---DGHIMRCVRDQNGNHVIQKCIE 830
L ++R R +NGN V+ K +E
Sbjct: 261 DLLACKTEMLIRLARSENGNFVVCKLLE 288
>sp|Q562C7|K0020_RAT Pumilio domain-containing protein KIAA0020 homolog OS=Rattus
norvegicus PE=2 SV=1
Length = 647
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/269 (20%), Positives = 122/269 (45%), Gaps = 16/269 (5%)
Query: 700 IAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKFFEH 759
I G + + +R IQ ++ + E++ F+E+ + L + +++KF +
Sbjct: 165 IQGKIKTIAFAHDSTRVIQCLIQYGSEEQRKWAFEELQGDLVELSKAKYSRNIVKKFLMY 224
Query: 760 GTASQVRELADQLTGHVLTLSLQMYGCRVIQKAI-EVVELDQQTQMVKELDGHIMRCVRD 818
G+ Q+ E+ GHV + +++ A + L+Q+ + +EL G+ + +
Sbjct: 225 GSKPQIAEIIRSFKGHVRKMLRHSEASAIVEYAYNDKAILEQRNMLTEELYGNTFQLYK- 283
Query: 819 QNGNH-VIQKCIECVPEDAIQFI------VLTFYDQVVTLSTHPYGCRVIQRVLEHCHDE 871
+ +H ++K +E P ++ I +LT Q + H +V +
Sbjct: 284 -SADHPTLEKVLEVQP-GKLELILDEMKQILTPMAQKEAVIKHSLVHKVFLDFFTYA-PP 340
Query: 872 KTQSIMMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQIVQMSQQKFAS 931
K +S +++ I ++V LA G V H L HG P +R I+K + + +++ +++
Sbjct: 341 KLRSELIEAIREAVVYLAHTHDGARVAMHCLWHGTPKDRKVIVKTMKTYVEKIANGQYSH 400
Query: 932 NVIE---KCLSFGTPAERQALVNEMLGSI 957
V+ C+ T +Q +++E++ S+
Sbjct: 401 LVLLAAFDCID-DTKLVKQIIISEVISSL 428
Score = 41.6 bits (96), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 63/120 (52%), Gaps = 8/120 (6%)
Query: 843 TFYDQVVTLSTHPYGCRVIQRVLEHCHDEKTQSIMMD--EILQ-SVCMLAQDQYGNYVVQ 899
T YD VV + H + ++R + C EK +M D +++Q + +A V+Q
Sbjct: 129 TNYD-VVVRAKHIWES--LRR--KDCDKEKRVKLMSDLQKLIQGKIKTIAFAHDSTRVIQ 183
Query: 900 HVLEHGKPHERSAIIKKLTGQIVQMSQQKFASNVIEKCLSFGTPAERQALVNEMLGSIEE 959
++++G +R ++L G +V++S+ K++ N+++K L +G+ + ++ G + +
Sbjct: 184 CLIQYGSEEQRKWAFEELQGDLVELSKAKYSRNIVKKFLMYGSKPQIAEIIRSFKGHVRK 243
>sp|Q15397|K0020_HUMAN Pumilio domain-containing protein KIAA0020 OS=Homo sapiens
GN=KIAA0020 PE=1 SV=3
Length = 648
Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 107/242 (44%), Gaps = 10/242 (4%)
Query: 700 IAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKFFEH 759
I G + + +R IQ ++ E++ F+E+ + L + +++KF +
Sbjct: 166 IQGKIKTIAFAHDSTRVIQCYIQYGNEEQRKQAFEELRDDLVELSKAKYSRNIVKKFLMY 225
Query: 760 GTASQVRELADQLTGHVLTLSLQMYGCRVIQKAI-EVVELDQQTQMVKELDGHIMRCVRD 818
G+ Q+ E+ GHV + +++ A + L+Q+ + +EL G+ + +
Sbjct: 226 GSKPQIAEIIRSFKGHVRKMLRHAEASAIVEYAYNDKAILEQRNMLTEELYGNTFQLYKS 285
Query: 819 QNGNHVIQKCIECVPEDAIQFI------VLTFYDQVVTLSTHPYGCRVIQRVLEHCHDEK 872
+ + + K +E PE ++ I +LT Q + H +V + K
Sbjct: 286 AD-HRTLDKVLEVQPE-KLELIMDEMKQILTPMAQKEAVIKHSLVHKVFLDFFTYA-PPK 342
Query: 873 TQSIMMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQIVQMSQQKFASN 932
+S M++ I ++V LA G V H L HG P +R I+K + + +++ +++
Sbjct: 343 LRSEMIEAIREAVVYLAHTHDGARVAMHCLWHGTPKDRKVIVKTMKTYVEKVANGQYSHL 402
Query: 933 VI 934
V+
Sbjct: 403 VL 404
Score = 37.7 bits (86), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 20/95 (21%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 868 CHDEKTQSIMMD--EILQ-SVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQIVQM 924
C EK +M D +++Q + +A V+Q +++G +R ++L +V++
Sbjct: 150 CDKEKRVKLMSDLQKLIQGKIKTIAFAHDSTRVIQCYIQYGNEEQRKQAFEELRDDLVEL 209
Query: 925 SQQKFASNVIEKCLSFGTPAERQALVNEMLGSIEE 959
S+ K++ N+++K L +G+ + ++ G + +
Sbjct: 210 SKAKYSRNIVKKFLMYGSKPQIAEIIRSFKGHVRK 244
>sp|Q8BKS9|K0020_MOUSE Pumilio domain-containing protein KIAA0020 OS=Mus musculus
GN=Kiaa0020 PE=2 SV=2
Length = 647
Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 107/243 (44%), Gaps = 12/243 (4%)
Query: 700 IAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKFFEH 759
I G + + +R IQ ++ E++ FQE+ + L + +++KF +
Sbjct: 165 IQGKIKTIAFAHDSTRVIQCFIQYGNEEQRKQAFQELQGDLVELSKAKYSRNIVKKFLMY 224
Query: 760 GTASQVRELADQLTGHVLTLSLQMYGCRVIQKAI-EVVELDQQTQMVKELDGHIMRCVRD 818
G+ QV E+ GHV + +++ A + L+Q+ + +EL G+ + +
Sbjct: 225 GSKPQVAEIIRSFKGHVRKMLRHSEASAIVEYAYNDKAILEQRNMLTEELYGNTFQLYK- 283
Query: 819 QNGNH-VIQKCIECVPEDAIQFI------VLTFYDQVVTLSTHPYGCRVIQRVLEHCHDE 871
+ +H + K +E P ++ I +LT Q + H +V +
Sbjct: 284 -SADHPTLDKVLELQPA-KLELIMDEMKQILTPMAQKEAVIKHSLVHKVFLDFFTYA-PP 340
Query: 872 KTQSIMMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQIVQMSQQKFAS 931
K +S +++ I ++V LA G V H L HG P +R I+K + + +++ +++
Sbjct: 341 KPRSELIEAIREAVVYLAHTHDGARVAMHCLWHGTPKDRKVIVKTMKTYVEKVANGQYSH 400
Query: 932 NVI 934
V+
Sbjct: 401 LVL 403
Score = 41.6 bits (96), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 21/95 (22%), Positives = 50/95 (52%), Gaps = 3/95 (3%)
Query: 868 CHDEKTQSIMMD--EILQ-SVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQIVQM 924
C EK +M D +++Q + +A V+Q +++G +R ++L G +V++
Sbjct: 149 CDKEKRVKLMSDLQKLIQGKIKTIAFAHDSTRVIQCFIQYGNEEQRKQAFQELQGDLVEL 208
Query: 925 SQQKFASNVIEKCLSFGTPAERQALVNEMLGSIEE 959
S+ K++ N+++K L +G+ + ++ G + +
Sbjct: 209 SKAKYSRNIVKKFLMYGSKPQVAEIIRSFKGHVRK 243
>sp|Q12221|PUF2_YEAST mRNA-binding protein PUF2 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=PUF2 PE=1 SV=1
Length = 1075
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 115/254 (45%), Gaps = 21/254 (8%)
Query: 715 RFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKFFEHGTASQVRELADQLTG 774
+F L T E+ +V + +P+ L +D GN VIQK FE+ +++ +R++ +
Sbjct: 559 QFDSNSLSTIEMEQLAIVMLDQLPE---LSSDYLGNTVIQKLFEN-SSNIIRDIMLRKCN 614
Query: 775 HVLT-LSLQMYGCRVIQKAIEVVELDQQTQMVKE-LDGHIMRCVRDQNGNHVIQKCIEC- 831
LT + + G V QK I++ +Q +V + + DQ GN+VIQ ++
Sbjct: 615 KYLTSMGVHKNGTWVCQKIIKMANTPRQINLVTSGVSDYCTPLFNDQFGNYVIQGILKFG 674
Query: 832 VPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLE------HCHDEKTQSIMMDEILQSV 885
P ++ FI + T+ + YG R ++ LE C S+++ +L
Sbjct: 675 FPWNS--FIFESVLSHFWTIVQNRYGSRAVRACLEADSIITQCQLLTITSLII--VLSP- 729
Query: 886 CMLAQDQYGNYVVQHVLEHGK-PHERSAIIKKLTGQ-IVQMSQQKFASNVIEKCLSFGTP 943
LA D G ++ +L+ P++ + KL + +V++ K S + K L+
Sbjct: 730 -YLATDTNGTLLITWLLDTCTLPNKNLILCDKLVNKNLVKLCCHKLGSLTVLKILNLRGG 788
Query: 944 AERQALVNEMLGSI 957
E N+++ +I
Sbjct: 789 EEEALSKNKIIHAI 802
Score = 53.9 bits (128), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 108/243 (44%), Gaps = 25/243 (10%)
Query: 762 ASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKELDGHIMRCVRDQNG 821
A ++REL Q + L+ +++M + + +V LDQ + EL D G
Sbjct: 550 APKLRELRKQFDSNSLS-TIEM-------EQLAIVMLDQ----LPELSS-------DYLG 590
Query: 822 NHVIQKCIECVPEDAIQFIVLTFYDQVVT-LSTHPYGCRVIQRVLEHCHDEKTQSIMMDE 880
N VIQK E + I+ I+L ++ +T + H G V Q++++ + + +++
Sbjct: 591 NTVIQKLFEN-SSNIIRDIMLRKCNKYLTSMGVHKNGTWVCQKIIKMANTPRQINLVTSG 649
Query: 881 ILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQIVQMSQQKFASNVIEKCLSF 940
+ L DQ+GNYV+Q +L+ G P S I + + + Q ++ S + CL
Sbjct: 650 VSDYCTPLFNDQFGNYVIQGILKFGFPWN-SFIFESVLSHFWTIVQNRYGSRAVRACLEA 708
Query: 941 GTPAERQALVNEMLGSIEENEPLQVMMKDQFANYVVQKVLETCDDQQLELILNRIKVHLN 1000
+ + L+ + I P + D ++ +L+TC LIL V+ N
Sbjct: 709 DSIITQCQLL-TITSLIIVLSPY--LATDTNGTLLITWLLDTCTLPNKNLILCDKLVNKN 765
Query: 1001 ALK 1003
+K
Sbjct: 766 LVK 768
Score = 42.7 bits (99), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 74/188 (39%), Gaps = 7/188 (3%)
Query: 684 LDEFKSNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEK-NMVFQEIMPQALS 742
L E SN + L + ++ + G+ Q+ ++ A T + N+V +
Sbjct: 597 LFENSSNIIRDIMLRKCNKYLTSMGVHKNGTWVCQKIIKMANTPRQINLVTSGVSDYCTP 656
Query: 743 LMTDVFGNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQT 802
L D FGNYVIQ + G + + + H T+ YG R ++ +E + Q
Sbjct: 657 LFNDQFGNYVIQGILKFGFPWN-SFIFESVLSHFWTIVQNRYGSRAVRACLEADSIITQC 715
Query: 803 QMVKELDGHIM---RCVRDQNGNHVIQKCIE-C-VPEDAIQFIVLTFYDQVVTLSTHPYG 857
Q++ I+ D NG +I ++ C +P + +V L H G
Sbjct: 716 QLLTITSLIIVLSPYLATDTNGTLLITWLLDTCTLPNKNLILCDKLVNKNLVKLCCHKLG 775
Query: 858 CRVIQRVL 865
+ ++L
Sbjct: 776 SLTVLKIL 783
>sp|Q9LVG3|PUM18_ARATH Pumilio homolog 18 OS=Arabidopsis thaliana GN=APUM18 PE=2 SV=1
Length = 327
Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 108/254 (42%), Gaps = 19/254 (7%)
Query: 666 PWHSEAGGSLDESFASSLLDEFKSNKTKCFELSEIAG-------HVVEFSADQYGSRFIQ 718
P H+ + + S E SN K EL +A + + ++GSR +Q
Sbjct: 40 PLHAALFNLMTDGDGVSYFKEMISNSDKT-ELQRMASLLTSDSDYFMSIVTTKFGSRRVQ 98
Query: 719 QKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKFFEHGTASQVRELADQLTGHVLT 778
KL + + I+ + L + TD + +YV + + L +++ H L
Sbjct: 99 -KLLGKSDDVDAFFCAAILRRFLHITTDKYASYVTIRAMVVFDKVMKKALYERILYHALD 157
Query: 779 LSLQMYGCRVIQKAI-EVVELDQQTQMVKELDGHIMRCVRDQNGNHVIQKCIECVPEDAI 837
L+ +GC + I + + + Q+++ + + +R D +GN V+Q + I
Sbjct: 158 LACDQHGCIALNDIITDADDPYYRDQLLELVASNALRLSNDASGNFVVQHVLTLYDSRCI 217
Query: 838 QFIVLTFYDQVVTLSTHPYGCRVIQRVLEHCHDEKTQSIMM-----DEILQSVCMLAQDQ 892
I + Y Q + LS YG +++++LE + + D +++ LA+++
Sbjct: 218 HNIAVNLYGQCIELSFKKYGSYIVEKLLEVEESMVVVVVELLGCDGDRLMR----LARNE 273
Query: 893 YGNYVVQHVLEHGK 906
+GN+VV L K
Sbjct: 274 FGNFVVVKALRFTK 287
>sp|Q9XI17|PUM20_ARATH Putative pumilio homolog 20 OS=Arabidopsis thaliana GN=APUM20 PE=5
SV=2
Length = 332
Score = 53.9 bits (128), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/259 (20%), Positives = 116/259 (44%), Gaps = 24/259 (9%)
Query: 764 QVRELADQLTG---HVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKELDGHIMRCVRDQN 820
+++ +A LT + L ++ M G + IQK + + D + + + D+
Sbjct: 79 KLQTMASLLTSDPDYFLMIARNMNGSKRIQKLLGKTD-DVDALFAAAILRRFLHIITDKY 137
Query: 821 GNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTH----PYGCRVIQRVLEHCHDEKTQSI 876
++V+++ + + + Y+ ++ ++H +G + ++ + K
Sbjct: 138 ASYVVRRGMTVFDKKKKK----AMYEHILHYASHIARDKHGNLALNDIITDAYRNK---- 189
Query: 877 MMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQIVQMSQQKFASNVIEK 936
+ D I +L+ D YGN+V+Q VL+ ++ I+ L G V +S QK+ S V++
Sbjct: 190 LFDVIAHKALVLSNDAYGNFVIQRVLKLNDLRSKNNIVVSLRGHFVDLSFQKYGSYVVDV 249
Query: 937 CLSFGTPAERQALVNEMLGSIEENEPLQVMMKDQFANYVVQKVLETCDDQQLELILNRIK 996
L T +V E++ E + L + ++++ N++V K L + + L
Sbjct: 250 LLE--TKESMVVVVEELMEC--EGDMLMRLARNEYGNFLVCKALRVTQKEMVRTDLFWGL 305
Query: 997 VH----LNALKKYTYGKHI 1011
VH + L +++ GK+I
Sbjct: 306 VHKLKPFHNLLRWSRGKNI 324
Score = 53.5 bits (127), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 6/121 (4%)
Query: 722 ETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKFFEHGTASQVRELADQLTGHVLTLSL 781
+ T +N +F I +AL L D +GN+VIQ+ + + L GH + LS
Sbjct: 180 DIITDAYRNKLFDVIAHKALVLSNDAYGNFVIQRVLKLNDLRSKNNIVVSLRGHFVDLSF 239
Query: 782 QMYGCRVIQKAIEVVELDQQTQMVKEL----DGHIMRCVRDQNGNHVIQKCIECVPEDAI 837
Q YG V+ +E E +V+EL +MR R++ GN ++ K + ++ +
Sbjct: 240 QKYGSYVVDVLLETKE--SMVVVVEELMECEGDMLMRLARNEYGNFLVCKALRVTQKEMV 297
Query: 838 Q 838
+
Sbjct: 298 R 298
Score = 40.0 bits (92), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 38/196 (19%), Positives = 95/196 (48%), Gaps = 13/196 (6%)
Query: 713 GSRFIQQKLETATTEEKNMVFQE-IMPQALSLMTDVFGNYVIQKFFEHGTASQVRELADQ 771
GS+ IQ+ L T++ + +F I+ + L ++TD + +YV+++ + + + +
Sbjct: 103 GSKRIQKLL--GKTDDVDALFAAAILRRFLHIITDKYASYVVRRGMTVFDKKKKKAMYEH 160
Query: 772 LTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKELDGHIMRCVRDQNGNHVIQKCIEC 831
+ + ++ +G + +++ + ++ + + D GN VIQ+ ++
Sbjct: 161 ILHYASHIARDKHGNLALN---DIITDAYRNKLFDVIAHKALVLSNDAYGNFVIQRVLKL 217
Query: 832 VPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEHCHDEKTQSIMMDEILQS----VCM 887
+ IV++ V LS YG V+ +LE +++ ++++E+++ +
Sbjct: 218 NDLRSKNNIVVSLRGHFVDLSFQKYGSYVVDVLLE---TKESMVVVVEELMECEGDMLMR 274
Query: 888 LAQDQYGNYVVQHVLE 903
LA+++YGN++V L
Sbjct: 275 LARNEYGNFLVCKALR 290
>sp|Q9LRZ3|PUM24_ARATH Pumilio homolog 24 OS=Arabidopsis thaliana GN=APUM24 PE=2 SV=1
Length = 641
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 70/151 (46%), Gaps = 9/151 (5%)
Query: 658 NLSGGVMGPWHSEAGGSLDESFASSLLDEFKSNKTKCFELSEIAGHVVEFSADQYGSRFI 717
NL ++ W ++ + S L+ E + ++ G V E + SR +
Sbjct: 86 NLEQELVSLWEKMRRRNIGKEDRSKLISE---------AIRKMKGKVPEIAVSHVSSRVL 136
Query: 718 QQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKFFEHGTASQVRELADQLTGHVL 777
Q ++ + EK+++F E+ PQ L+L ++ + + IQK + + Q+ L GHV
Sbjct: 137 QTCVKFCSQAEKDVLFTELQPQFLNLASNKYAVHFIQKMLDGASKQQLAACISSLRGHVA 196
Query: 778 TLSLQMYGCRVIQKAIEVVELDQQTQMVKEL 808
L ++G V++ A + Q+ +++ EL
Sbjct: 197 PLLRHVFGSLVVEHAYHLGSAAQKQELLAEL 227
Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 63/116 (54%), Gaps = 8/116 (6%)
Query: 911 SAIIKKLTGQIVQMSQQKFASNVIEKCLSFGTPAERQALVNEMLGSIEENEPLQV-MMKD 969
S I+K+ G++ +++ +S V++ C+ F + AE+ L E+ +P + + +
Sbjct: 113 SEAIRKMKGKVPEIAVSHVSSRVLQTCVKFCSQAEKDVLFTEL-------QPQFLNLASN 165
Query: 970 QFANYVVQKVLETCDDQQLELILNRIKVHLNALKKYTYGKHIVARVEKLVAAGERR 1025
++A + +QK+L+ QQL ++ ++ H+ L ++ +G +V L +A +++
Sbjct: 166 KYAVHFIQKMLDGASKQQLAACISSLRGHVAPLLRHVFGSLVVEHAYHLGSAAQKQ 221
Score = 37.4 bits (85), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 57/133 (42%), Gaps = 5/133 (3%)
Query: 647 DRNMRFPSGMRNLSGGVMGPWHSEAGGSLDESFASSLLDEFKSNKTKCFELSEIAGHVVE 706
DR+ +R + G V E S S +F S K +E+ +
Sbjct: 107 DRSKLISEAIRKMKGKV-----PEIAVSHVSSRVLQTCVKFCSQAEKDVLFTELQPQFLN 161
Query: 707 FSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKFFEHGTASQVR 766
++++Y FIQ+ L+ A+ ++ + L+ VFG+ V++ + G+A+Q +
Sbjct: 162 LASNKYAVHFIQKMLDGASKQQLAACISSLRGHVAPLLRHVFGSLVVEHAYHLGSAAQKQ 221
Query: 767 ELADQLTGHVLTL 779
EL +L L L
Sbjct: 222 ELLAELYSTELQL 234
>sp|Q9LSS8|PUM19_ARATH Putative pumilio homolog 19 OS=Arabidopsis thaliana GN=APUM19 PE=3
SV=2
Length = 327
Score = 52.0 bits (123), Expect = 2e-05, Method: Composition-based stats.
Identities = 49/230 (21%), Positives = 107/230 (46%), Gaps = 17/230 (7%)
Query: 688 KSNKTKCFELSEI----AGHVVEFSADQYGSRFIQQKLETATTEEKNMVF-QEIMPQALS 742
KS+KT+ ++ + + + + ++GSR +Q+ L +++ + F I+ + L
Sbjct: 64 KSDKTELQRMASLLTSDSDYFMSIVTTKFGSRRVQKLL--GKSDDVDAFFCAAILRRFLH 121
Query: 743 LMTDVFGNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAI-EVVELDQQ 801
+ TD + +YV + + L +++ H L L+ +GC + I + + +
Sbjct: 122 ITTDKYASYVTIRAMVVFDKVMKKALYERILYHALDLACDQHGCIALNDIITDADDPYYR 181
Query: 802 TQMVKELDGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVI 861
Q+++ + + +R D +GN V+Q + I I + Y Q + LS YG ++
Sbjct: 182 DQLLELVVSNALRLSNDASGNFVVQHVLTLYDSRCIHNIAVNLYGQCIELSFKKYGSYIV 241
Query: 862 QRVLEHCHDEKTQSIMM-----DEILQSVCMLAQDQYGNYVVQHVLEHGK 906
+++LE + + D +++ LA++++GN+VV L K
Sbjct: 242 EKLLEVEESMVVVVVELLGCDGDRLMR----LARNEFGNFVVVKALRFTK 287
Score = 50.8 bits (120), Expect = 5e-05, Method: Composition-based stats.
Identities = 51/253 (20%), Positives = 112/253 (44%), Gaps = 8/253 (3%)
Query: 741 LSLMTDVFGNYVIQKFFEHGTASQVRELADQLTG---HVLTLSLQMYGCRVIQKAIEVVE 797
+LMTD G ++ ++++ +A LT + +++ +G R +QK + +
Sbjct: 46 FNLMTDGDGVSYFKEMISKSDKTELQRMASLLTSDSDYFMSIVTTKFGSRRVQKLLGKSD 105
Query: 798 LDQQTQMVKELDGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYG 857
D + + D+ ++V + + + + + + L+ +G
Sbjct: 106 -DVDAFFCAAILRRFLHITTDKYASYVTIRAMVVFDKVMKKALYERILYHALDLACDQHG 164
Query: 858 CRVIQRVLEHCHDEKTQSIMMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKL 917
C + ++ D + +++ ++ + L+ D GN+VVQHVL I L
Sbjct: 165 CIALNDIITDADDPYYRDQLLELVVSNALRLSNDASGNFVVQHVLTLYDSRCIHNIAVNL 224
Query: 918 TGQIVQMSQQKFASNVIEKCLSFGTPAERQALVNEMLGSIEENEPLQVMMKDQFANYVVQ 977
GQ +++S +K+ S ++EK L +V E+LG + + L + +++F N+VV
Sbjct: 225 YGQCIELSFKKYGSYIVEKLLE--VEESMVVVVVELLGC--DGDRLMRLARNEFGNFVVV 280
Query: 978 KVLETCDDQQLEL 990
K L + +++L
Sbjct: 281 KALRFTKEMRMDL 293
Score = 43.9 bits (102), Expect = 0.007, Method: Composition-based stats.
Identities = 34/135 (25%), Positives = 63/135 (46%), Gaps = 3/135 (2%)
Query: 703 HVVEFSADQYGSRFIQQKLETATTEE-KNMVFQEIMPQALSLMTDVFGNYVIQKFFEHGT 761
H ++ + DQ+G + + A ++ + + ++ AL L D GN+V+Q
Sbjct: 154 HALDLACDQHGCIALNDIITDADDPYYRDQLLELVVSNALRLSNDASGNFVVQHVLTLYD 213
Query: 762 ASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKE-LDG-HIMRCVRDQ 819
+ + +A L G + LS + YG +++K +EV E + DG +MR R++
Sbjct: 214 SRCIHNIAVNLYGQCIELSFKKYGSYIVEKLLEVEESMVVVVVELLGCDGDRLMRLARNE 273
Query: 820 NGNHVIQKCIECVPE 834
GN V+ K + E
Sbjct: 274 FGNFVVVKALRFTKE 288
>sp|O61345|PEN_DROME Protein penguin OS=Drosophila melanogaster GN=pen PE=2 SV=1
Length = 737
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/145 (20%), Positives = 68/145 (46%), Gaps = 11/145 (7%)
Query: 813 MRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEHCHDEK 872
+RC R +N + ++++ + VL D + + RVIQ +L++
Sbjct: 147 LRCRRTENKDKLVEQI----------YKVLNVGDTISKVVKAHDTARVIQSMLKYA-SPA 195
Query: 873 TQSIMMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQIVQMSQQKFASN 932
++ + +++L + Q +Y + VQ +L++G P ++ ++ L G IV+++ S
Sbjct: 196 LRAEISEKLLPFTVEMCQSKYAQFCVQRMLKYGAPATKAKLVDSLYGHIVRLAGHSIGSG 255
Query: 933 VIEKCLSFGTPAERQALVNEMLGSI 957
+++ TP +R + E G +
Sbjct: 256 LLDSMYQSATPNQRIYMRQEFYGDL 280
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/107 (20%), Positives = 52/107 (48%)
Query: 714 SRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKFFEHGTASQVRELADQLT 773
+R IQ L+ A+ + + ++++P + + + + +Q+ ++G + +L D L
Sbjct: 182 ARVIQSMLKYASPALRAEISEKLLPFTVEMCQSKYAQFCVQRMLKYGAPATKAKLVDSLY 241
Query: 774 GHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKELDGHIMRCVRDQN 820
GH++ L+ G ++ + +Q+ M +E G + R +D N
Sbjct: 242 GHIVRLAGHSIGSGLLDSMYQSATPNQRIYMRQEFYGDLYRKAKDSN 288
>sp|Q09622|PUF12_CAEEL Pumilio domain-containing protein 12 OS=Caenorhabditis elegans
GN=puf-12 PE=4 SV=1
Length = 766
Score = 47.0 bits (110), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 52/284 (18%), Positives = 120/284 (42%), Gaps = 15/284 (5%)
Query: 700 IAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKFFEH 759
+ GH + SR I+ + T N +F E+ P+ + + +V+ + ++K ++
Sbjct: 278 VKGHAAKLIYAHDTSRVIECLVATEREGIINNLFNELTPEIVRMSKNVYSKFFVKKMLKN 337
Query: 760 GTASQVRELADQLTGHVLTLSLQMYGCRVIQKAI-EVVELDQQTQMVKELDGHIMRCVRD 818
GT Q + + GH TL + V++ A + Q+ ++ E G R+
Sbjct: 338 GTKEQRDIIINAFRGHAPTLLRIKHAAEVLEYAYNDFANAHQRYNIITEFYGKEFILFRE 397
Query: 819 QNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCR--VIQRVL----EHCHDEK 872
N + + E PE + ++L D+V+ R ++ +++ ++C +EK
Sbjct: 398 DNIRSLTEILAE-KPEKKV--VILKHLDEVIGAVNEKETLRLSILHKLMLDFFDNCDEEK 454
Query: 873 TQSIMMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQIVQMSQQKFASN 932
+ ++D + + G + ++ ER I+K V+ + + +
Sbjct: 455 KIN-LLDSLKDKIPEFIHTPDGAKLAIKLIWFAPVKERKLIVKNFKDLSVKAAMEHYGHR 513
Query: 933 VIEKCLSFGTPAERQALVNEMLGSIEENEPLQVMMKDQFANYVV 976
V+ L+ + L+N+++ S NE ++ +++D + V+
Sbjct: 514 VL---LALFDTVDDTVLLNKVIVSELANE-MKKLIEDDWGEKVI 553
>sp|Q9UU76|PUF6_SCHPO Pumilio homology domain family member 6 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=puf6 PE=1 SV=1
Length = 642
Score = 40.4 bits (93), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 51/98 (52%), Gaps = 2/98 (2%)
Query: 859 RVIQRVLEHCHDEKTQSIMMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLT 918
RV+Q ++ ++ ++I E+ S L + YG Y+ + ++G P + I+ ++
Sbjct: 177 RVVQTCVKFGSKQQRETICA-ELAGSYVDLCKSPYGKYLAIKIFKYGTPKMKEVILGEMY 235
Query: 919 GQIVQMSQQKFASNVIEKCL-SFGTPAERQALVNEMLG 955
G +V+M + + A+ V+E F +++AL+ E G
Sbjct: 236 GNVVKMIRHREAAYVVEDAFREFTNLQQQRALICEFYG 273
Score = 35.4 bits (80), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 26/122 (21%), Positives = 55/122 (45%), Gaps = 1/122 (0%)
Query: 714 SRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKFFEHGTASQVRELADQLT 773
SR +Q ++ + +++ + E+ + L +G Y+ K F++GT + ++
Sbjct: 176 SRVVQTCVKFGSKQQRETICAELAGSYVDLCKSPYGKYLAIKIFKYGTPKMKEVILGEMY 235
Query: 774 GHVLTLSLQMYGCRVIQKAI-EVVELDQQTQMVKELDGHIMRCVRDQNGNHVIQKCIECV 832
G+V+ + V++ A E L QQ ++ E G + +D+ + I K +
Sbjct: 236 GNVVKMIRHREAAYVVEDAFREFTNLQQQRALICEFYGPEFQVFKDRTQDIHIDKLLIDH 295
Query: 833 PE 834
PE
Sbjct: 296 PE 297
>sp|Q04373|PUF6_YEAST Pumilio homology domain family member 6 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=PUF6 PE=1 SV=1
Length = 656
Score = 39.7 bits (91), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 897 VVQHVLEHGKPHERSAIIKKLTGQIVQMSQQKFASNVIEKCLSFGTPAERQALVNEMLGS 956
+VQ ++++ R I+ L G+ ++ + ++ K L +G+ + RQ ++NE+ GS
Sbjct: 173 IVQTLVKYSSKDRREQIVDALKGKFYVLATSAYGKYLLVKLLHYGSRSSRQTIINELHGS 232
Query: 957 IEENEPLQVMMKDQFANYVVQK--VLETCDDQQLELI 991
L+ +M+ + YVV+ VL +Q+ ++I
Sbjct: 233 ------LRKLMRHREGAYVVEDLFVLYATHEQRQQMI 263
Score = 34.7 bits (78), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 32/148 (21%), Positives = 68/148 (45%), Gaps = 7/148 (4%)
Query: 815 CVRD----QNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEHCHD 870
C+ D + + ++Q ++ +D + IV + L+T YG ++ ++L +
Sbjct: 160 CISDLVLKHDASRIVQTLVKYSSKDRREQIVDALKGKFYVLATSAYGKYLLVKLLHYGSR 219
Query: 871 EKTQSIMMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHE-RSAIIKKLTGQIVQMSQQKF 929
Q+I ++E+ S+ L + + G YVV+ + HE R +IK+ G + ++
Sbjct: 220 SSRQTI-INELHGSLRKLMRHREGAYVVEDLFVLYATHEQRQQMIKEFWGSEYAVFRETH 278
Query: 930 ASNVIEKCLSFGTPAERQALVNEMLGSI 957
IEK + +R + ++G+I
Sbjct: 279 KDLTIEKVCE-SSIEKRNIIARNLIGTI 305
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.131 0.376
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 392,726,174
Number of Sequences: 539616
Number of extensions: 18016761
Number of successful extensions: 61450
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 116
Number of HSP's successfully gapped in prelim test: 361
Number of HSP's that attempted gapping in prelim test: 53905
Number of HSP's gapped (non-prelim): 5400
length of query: 1034
length of database: 191,569,459
effective HSP length: 128
effective length of query: 906
effective length of database: 122,498,611
effective search space: 110983741566
effective search space used: 110983741566
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 67 (30.4 bits)