Query 001678
Match_columns 1033
No_of_seqs 398 out of 2550
Neff 4.8
Searched_HMMs 29240
Date Tue Mar 26 16:17:01 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/001678.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_976-980//hhsearch_pdb/001678hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4b9d_A Serine/threonine-protei 1.0 1 1 357.4 18.4 204 798-1031 22-229 (350)
2 4aw0_A HPDK1, 3-phosphoinositi 1.0 1 1 354.3 18.6 204 798-1031 30-238 (311)
3 4fie_A Serine/threonine-protei 1.0 1 1 352.9 21.9 198 799-1030 150-350 (423)
4 4fih_A Serine/threonine-protei 1.0 1 1 350.7 21.1 198 799-1030 73-273 (346)
5 3ubd_A Ribosomal protein S6 ki 1.0 1 1 347.8 14.8 205 796-1031 20-230 (304)
6 3omv_A RAF proto-oncogene seri 1.0 1 1 347.4 20.9 210 793-1031 29-241 (307)
7 3v5w_A G-protein coupled recep 1.0 1 1 346.5 20.9 208 795-1029 184-393 (689)
8 4g3f_A NF-kappa-beta-inducing 1.0 1 1 344.8 20.3 196 798-1031 56-260 (336)
9 4asz_A BDNF/NT-3 growth factor 1.0 1 1 343.9 17.9 206 794-1031 7-235 (299)
10 4aoj_A High affinity nerve gro 1.0 1 1 341.4 21.9 207 793-1031 34-265 (329)
No 1
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=1.00 E-value=1 Score=357.38 Aligned_cols=204 Identities=21% Similarity=0.397 Sum_probs=177.0
Q ss_pred CCCCCEEEEEECCCCCEEEEEEEEC--CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECC
Q ss_conf 5888139999642483799999985--96259998303334899246899999999999999716999800388999818
Q 001678 798 KNDDLEEVRELGSGTYGSVYHGKWR--GSDVAIKRIKASCFAGKPSERERLIADFWKEALLLSSLHHPNVVSFYGIVRDG 875 (1033)
Q Consensus 798 ~~~dYeiLkkLGkGsFGtVYkAk~k--GtkVAIKvik~s~l~~k~~erer~ik~FlkEi~ILkkL~HPNIVkLlGvf~e~ 875 (1033)
..++|+++++||+|+||+||+|+++ ++.||||++...... ......+.+|+.++++|+|||||++++++.+
T Consensus 22 sme~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~------~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~- 94 (350)
T 4b9d_A 22 SMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMS------SKEREESRREVAVLANMKHPNIVQYRESFEE- 94 (350)
T ss_dssp CCCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSC------HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-
T ss_pred CCCCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCC------HHHHHHHHHHHHHHHHCCCCCCCCEEEEEEE-
T ss_conf 512558847970277939999998899989999998658789------7999999999999987799898919999998-
Q ss_pred CCCCEEEEEEECCCCCHHHHHHHC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCEEEEEEC
Q ss_conf 999559998421477089999732-7765899999999999999999994994215799996798058999990999844
Q 001678 876 PDGSLATVTEFMVNGSLKQFLQKK-DRTIDRRKRLIIAMDAAFGMEYLHGKNIVHFDLKCENLLVNMRDPQRPVCKIGDL 954 (1033)
Q Consensus 876 e~g~l~LVmEYiegGSL~dlLkk~-~k~lse~~il~IA~QIlkALeYLHskGIIHRDIKPsNILLd~~~~~~g~VKLiDF 954 (1033)
.+.+|||||||++|+|.++|... ...+++..++.|+.||+.||.|||+++||||||||+||||+ .++.+||+||
T Consensus 95 -~~~~yiVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~----~~g~vKl~DF 169 (350)
T 4b9d_A 95 -NGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLT----KDGTVQLGDF 169 (350)
T ss_dssp -TTEEEEEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEEC----TTCCEEECST
T ss_pred -CCEEEEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHEEEC----CCCCEEECCC
T ss_conf -99999999488998399999973899997899999999999999999989915135978997987----8999897646
Q ss_pred CCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 8841134553-3477678886446410258876653023210000210357743440899999999990699998988
Q 001678 955 GLSKVKQQTL-VSGGVRGTLPWMAPELLSGKSHMVTEKVTLFSLKFCCFQLKWSYDCYSLGILFFFLQFILCFIDFFS 1031 (1033)
Q Consensus 955 GLAk~~~~~~-~s~~~~GT~~YmAPEvl~gk~~~~t~ksDIwSLGi~L~eittkvDIWSLGVILYeLLTGk~PFd~~s 1031 (1033)
|+|+...... .....+||+.|||||++.+.. |+.++||||||||+|+|++|+.||...+
T Consensus 170 Gla~~~~~~~~~~~~~~GT~~YmAPE~l~~~~------------------y~~~~DiwSlGvilyemltG~~PF~~~~ 229 (350)
T 4b9d_A 170 GIARVLNSTVELARACIGTPYYLSPEICENKP------------------YNNKSDIWALGCVLYELCTLKHAFEAGS 229 (350)
T ss_dssp TEESCCCHHHHHHHHHHSCCTTCCHHHHTTCC------------------CCHHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred CCCEEECCCCCCCCCCCCCCCCCCHHHHCCCC------------------CCCHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 52144068854101457883603999987999------------------8959999999999999997879989969
No 2
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=1.00 E-value=1 Score=354.33 Aligned_cols=204 Identities=28% Similarity=0.387 Sum_probs=177.0
Q ss_pred CCCCCEEEEEECCCCCEEEEEEEE--CCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECC
Q ss_conf 588813999964248379999998--596259998303334899246899999999999999716999800388999818
Q 001678 798 KNDDLEEVRELGSGTYGSVYHGKW--RGSDVAIKRIKASCFAGKPSERERLIADFWKEALLLSSLHHPNVVSFYGIVRDG 875 (1033)
Q Consensus 798 ~~~dYeiLkkLGkGsFGtVYkAk~--kGtkVAIKvik~s~l~~k~~erer~ik~FlkEi~ILkkL~HPNIVkLlGvf~e~ 875 (1033)
..++|++++.||+|+||+||+|++ +++.||||++.+..... ......+.+|+.+++.++|||||+++++|++
T Consensus 30 ~~~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~-----~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~- 103 (311)
T 4aw0_A 30 RPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIK-----ENKVPYVTRERDVMSRLDHPFFVKLYFTFQD- 103 (311)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHH-----TTCHHHHHHHHHHHTTCCCTTBCCEEEEEEC-
T ss_pred CCCCCEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCCC-----HHHHHHHHHHHHHHHHCCCCCCCEEEEEEEE-
T ss_conf 8523689889831648499999999999899999988888779-----7899999999999986799898919999973-
Q ss_pred CCCCEEEEEEECCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCEEEEEECC
Q ss_conf 99955999842147708999973277658999999999999999999949942157999967980589999909998448
Q 001678 876 PDGSLATVTEFMVNGSLKQFLQKKDRTIDRRKRLIIAMDAAFGMEYLHGKNIVHFDLKCENLLVNMRDPQRPVCKIGDLG 955 (1033)
Q Consensus 876 e~g~l~LVmEYiegGSL~dlLkk~~k~lse~~il~IA~QIlkALeYLHskGIIHRDIKPsNILLd~~~~~~g~VKLiDFG 955 (1033)
.+.+|+||||+++|+|.+++.+.+ .+++..+..++.||+.||+|||+++||||||||+|||++ .++.+||+|||
T Consensus 104 -~~~~yivmEy~~gG~L~~~i~~~~-~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~----~~g~vKl~DFG 177 (311)
T 4aw0_A 104 -DEKLYFGLSYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN----EDMHIQITDFG 177 (311)
T ss_dssp -SSEEEEEECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC----TTSCEEECCCT
T ss_pred -CCEEEEEEECCCCCCHHHHHHHCC-CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEC----CCCCEEEEECC
T ss_conf -898999996489989999998749-999999999999999999999988782687878996985----89888998768
Q ss_pred CCCCCCCC---CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 84113455---33477678886446410258876653023210000210357743440899999999990699998988
Q 001678 956 LSKVKQQT---LVSGGVRGTLPWMAPELLSGKSHMVTEKVTLFSLKFCCFQLKWSYDCYSLGILFFFLQFILCFIDFFS 1031 (1033)
Q Consensus 956 LAk~~~~~---~~s~~~~GT~~YmAPEvl~gk~~~~t~ksDIwSLGi~L~eittkvDIWSLGVILYeLLTGk~PFd~~s 1031 (1033)
+|+..... .....++||+.|||||++.++. |+.++||||+||++|+|++|++||...+
T Consensus 178 la~~~~~~~~~~~~~~~~GTp~YmAPEvl~~~~------------------y~~~~DiWSlGvilyeml~G~~PF~~~~ 238 (311)
T 4aw0_A 178 TAKVLSPESKQARANSFVGTAQYVSPELLTEKS------------------ACKSSDLWALGCIIYQLVAGLPPFRAGN 238 (311)
T ss_dssp TCEECCTTTTCCCBCCCCSCGGGCCHHHHHHSC------------------BCHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred CCEECCCCCCCCCCCCCCCCCCCCCHHHHCCCC------------------CCCHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 750257787765436755680307998976899------------------9968989989999999974989989979
No 3
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=1.00 E-value=1 Score=352.95 Aligned_cols=198 Identities=23% Similarity=0.333 Sum_probs=173.6
Q ss_pred CCCCEEEEEECCCCCEEEEEEEEC--CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCC
Q ss_conf 888139999642483799999985--962599983033348992468999999999999997169998003889998189
Q 001678 799 NDDLEEVRELGSGTYGSVYHGKWR--GSDVAIKRIKASCFAGKPSERERLIADFWKEALLLSSLHHPNVVSFYGIVRDGP 876 (1033)
Q Consensus 799 ~~dYeiLkkLGkGsFGtVYkAk~k--GtkVAIKvik~s~l~~k~~erer~ik~FlkEi~ILkkL~HPNIVkLlGvf~e~e 876 (1033)
.+.|+++++||+|+||.||+|+++ ++.||||++....... .+.+.+|+.+|+.++|||||+++++|.+
T Consensus 150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~--------~~~~~~Ei~il~~l~HpnIV~l~~~~~~-- 219 (423)
T 4fie_A 150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR--------RELLFNEVVIMRDYQHENVVEMYNSYLV-- 219 (423)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSS--------GGGHHHHHHHHHHCCCTTBCCEEEEEEE--
T ss_pred HHHCEEEEEECCCCCCEEEEEEECCCCCEEEEEEEECCCHHH--------HHHHHHHHHHHHHCCCCCCCCEEEEEEE--
T ss_conf 684386169624818489999999999899999986255468--------9999999999985799898716899998--
Q ss_pred CCCEEEEEEECCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCEEEEEECCC
Q ss_conf 99559998421477089999732776589999999999999999999499421579999679805899999099984488
Q 001678 877 DGSLATVTEFMVNGSLKQFLQKKDRTIDRRKRLIIAMDAAFGMEYLHGKNIVHFDLKCENLLVNMRDPQRPVCKIGDLGL 956 (1033)
Q Consensus 877 ~g~l~LVmEYiegGSL~dlLkk~~k~lse~~il~IA~QIlkALeYLHskGIIHRDIKPsNILLd~~~~~~g~VKLiDFGL 956 (1033)
.+.+|||||||++|+|.++++.. .+++..+..|+.||+.||.|||+++||||||||+||||+ .++.+||+|||+
T Consensus 220 ~~~~~iVmEy~~gG~L~~~i~~~--~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~----~~g~vKl~DFGl 293 (423)
T 4fie_A 220 GDELWVVMEFLEGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLT----HDGRVKLSDFGF 293 (423)
T ss_dssp TTEEEEEEECCTTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEEC----TTCCEEECCCTT
T ss_pred CCEEEEEEECCCCCCHHHHHHCC--CCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEC----CCCCEEEECCCC
T ss_conf 99999999698998289887616--989999999999999999999988904465787778985----899989803726
Q ss_pred CCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 4113455-3347767888644641025887665302321000021035774344089999999999069999898
Q 001678 957 SKVKQQT-LVSGGVRGTLPWMAPELLSGKSHMVTEKVTLFSLKFCCFQLKWSYDCYSLGILFFFLQFILCFIDFF 1030 (1033)
Q Consensus 957 Ak~~~~~-~~s~~~~GT~~YmAPEvl~gk~~~~t~ksDIwSLGi~L~eittkvDIWSLGVILYeLLTGk~PFd~~ 1030 (1033)
|+..... ......+||+.|||||++.+.. |+.++|||||||++|+|++|++||.-.
T Consensus 294 a~~~~~~~~~~~~~~GTp~YmAPEvl~~~~------------------y~~~~DiWSlGvilyeml~G~~PF~~~ 350 (423)
T 4fie_A 294 CAQVSKEVPRRKSLVGTPYWMAPELISRLP------------------YGPEVDIWSLGIMVIEMVDGEPPYFNE 350 (423)
T ss_dssp CEECCSSCCCBCCCEECTTTCCHHHHTTCC------------------BCTHHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred CEECCCCCCCCCCCCCCCCCCCHHHHCCCC------------------CCCHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 547778876434666474727999977999------------------996899999999999999787998986
No 4
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=1.00 E-value=1 Score=350.73 Aligned_cols=198 Identities=23% Similarity=0.333 Sum_probs=173.7
Q ss_pred CCCCEEEEEECCCCCEEEEEEEEC--CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCC
Q ss_conf 888139999642483799999985--962599983033348992468999999999999997169998003889998189
Q 001678 799 NDDLEEVRELGSGTYGSVYHGKWR--GSDVAIKRIKASCFAGKPSERERLIADFWKEALLLSSLHHPNVVSFYGIVRDGP 876 (1033)
Q Consensus 799 ~~dYeiLkkLGkGsFGtVYkAk~k--GtkVAIKvik~s~l~~k~~erer~ik~FlkEi~ILkkL~HPNIVkLlGvf~e~e 876 (1033)
...|+++++||+|+||.||+|+++ ++.||||++....... .+.+.+|+.+|+.++|||||+++++|.+
T Consensus 73 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~--------~~~~~~Ei~il~~l~HpnIV~l~~~~~~-- 142 (346)
T 4fih_A 73 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR--------RELLFNEVVIMRDYQHENVVEMYNSYLV-- 142 (346)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSS--------GGGGHHHHHHHHHCCCTTBCCEEEEEEE--
T ss_pred HHHCEEEEEEECCCCEEEEEEEECCCCCEEEEEEEECCCHHH--------HHHHHHHHHHHHHCCCCCCCCEEEEEEE--
T ss_conf 575387079602728299999998999899999985276568--------9999999999986799899919999998--
Q ss_pred CCCEEEEEEECCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCEEEEEECCC
Q ss_conf 99559998421477089999732776589999999999999999999499421579999679805899999099984488
Q 001678 877 DGSLATVTEFMVNGSLKQFLQKKDRTIDRRKRLIIAMDAAFGMEYLHGKNIVHFDLKCENLLVNMRDPQRPVCKIGDLGL 956 (1033)
Q Consensus 877 ~g~l~LVmEYiegGSL~dlLkk~~k~lse~~il~IA~QIlkALeYLHskGIIHRDIKPsNILLd~~~~~~g~VKLiDFGL 956 (1033)
.+.+|||||||++|+|.+++.+. .+++..++.|+.||+.||.|||+++||||||||+||||+ .++.+||+|||+
T Consensus 143 ~~~~~ivmEy~~gg~L~~~l~~~--~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~----~~g~vKl~DFGl 216 (346)
T 4fih_A 143 GDELWVVMEFLEGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLT----HDGRVKLSDFGF 216 (346)
T ss_dssp TTEEEEEECCCTTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC----TTCCEEECCCTT
T ss_pred CCEEEEEEECCCCCCHHHHHHCC--CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEC----CCCCEEEECCCC
T ss_conf 99999999698998089998718--989999999999999999999988835562788997887----999889902757
Q ss_pred CCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 4113455-3347767888644641025887665302321000021035774344089999999999069999898
Q 001678 957 SKVKQQT-LVSGGVRGTLPWMAPELLSGKSHMVTEKVTLFSLKFCCFQLKWSYDCYSLGILFFFLQFILCFIDFF 1030 (1033)
Q Consensus 957 Ak~~~~~-~~s~~~~GT~~YmAPEvl~gk~~~~t~ksDIwSLGi~L~eittkvDIWSLGVILYeLLTGk~PFd~~ 1030 (1033)
|+..... ......+||+.|||||++.+.. |+.++||||||||+|+|++|++||.-.
T Consensus 217 a~~~~~~~~~~~~~~GTp~YmAPEvl~~~~------------------y~~~~DiWSlGvilyeml~G~~PF~~~ 273 (346)
T 4fih_A 217 CAQVSKEVPRRKSLVGTPYWMAPELISRLP------------------YGPEVDIWSLGIMVIEMVDGEPPYFNE 273 (346)
T ss_dssp CEECCSSSCCBCCCCSCGGGCCHHHHTTCC------------------BCTHHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred CEECCCCCCCCCCCCCCCCCCCHHHHCCCC------------------CCCHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 536678877534656275827999977999------------------996899999999999999787998985
No 5
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=1.00 E-value=1 Score=347.85 Aligned_cols=205 Identities=24% Similarity=0.320 Sum_probs=175.7
Q ss_pred CCCCCCCEEEEEECCCCCEEEEEEEE-----CCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE
Q ss_conf 33588813999964248379999998-----5962599983033348992468999999999999997169998003889
Q 001678 796 TIKNDDLEEVRELGSGTYGSVYHGKW-----RGSDVAIKRIKASCFAGKPSERERLIADFWKEALLLSSLHHPNVVSFYG 870 (1033)
Q Consensus 796 ~I~~~dYeiLkkLGkGsFGtVYkAk~-----kGtkVAIKvik~s~l~~k~~erer~ik~FlkEi~ILkkL~HPNIVkLlG 870 (1033)
.+..++|++++.||+|+||+||+|++ +++.||||+++......... ..+.+|+.++++++|||||++++
T Consensus 20 ~~~p~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~------~~~~~E~~il~~l~HpnIv~l~~ 93 (304)
T 3ubd_A 20 KADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDR------VRTKMERDILVEVNHPFIVKLHY 93 (304)
T ss_dssp CCCGGGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEEC------C------CCCCCCCCTTEECEEE
T ss_pred CCCCCCCEEEEEEECCCCEEEEEEEECCCCCCCEEEEEEEEEHHHCCHHHH------HHHHHHHHHHHHCCCCCCCEEEE
T ss_conf 389556589889721888399999985588789799999981577684789------99999999998779979990999
Q ss_pred EEECCCCCCEEEEEEECCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCEEE
Q ss_conf 99818999559998421477089999732776589999999999999999999499421579999679805899999099
Q 001678 871 IVRDGPDGSLATVTEFMVNGSLKQFLQKKDRTIDRRKRLIIAMDAAFGMEYLHGKNIVHFDLKCENLLVNMRDPQRPVCK 950 (1033)
Q Consensus 871 vf~e~e~g~l~LVmEYiegGSL~dlLkk~~k~lse~~il~IA~QIlkALeYLHskGIIHRDIKPsNILLd~~~~~~g~VK 950 (1033)
++.+ .+.+|+|||||++|+|.+++.+.+ .+++..+..++.||+.||.|||+++||||||||+|||++ .++.+|
T Consensus 94 ~~~~--~~~~~ivmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~----~~g~vK 166 (304)
T 3ubd_A 94 AFQT--EGKLYLILDFLRGGDLFTRLSKEV-MFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLD----EEGHIK 166 (304)
T ss_dssp EEEE--TTEEEEEECCCTTCEEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEEC----TTSCEE
T ss_pred EEEE--CCEEEEEEECCCCCCHHHHHHHCC-CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEC----CCCCEE
T ss_conf 9998--999999997579988899997559-999999999999999999999977995888878995786----899887
Q ss_pred EEECCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCC
Q ss_conf 984488411345-5334776788864464102588766530232100002103577434408999999999906999989
Q 001678 951 IGDLGLSKVKQQ-TLVSGGVRGTLPWMAPELLSGKSHMVTEKVTLFSLKFCCFQLKWSYDCYSLGILFFFLQFILCFIDF 1029 (1033)
Q Consensus 951 LiDFGLAk~~~~-~~~s~~~~GT~~YmAPEvl~gk~~~~t~ksDIwSLGi~L~eittkvDIWSLGVILYeLLTGk~PFd~ 1029 (1033)
|+|||+|+.... .......+||+.|||||++.+.. |+.++||||+||++|+|+||+.||..
T Consensus 167 l~DFGla~~~~~~~~~~~~~~GT~~YmAPE~~~~~~------------------y~~~~DiwSlGvilyemltG~~PF~~ 228 (304)
T 3ubd_A 167 LTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRG------------------HTQSADWWSFGVLMFEMLTGTLPFQG 228 (304)
T ss_dssp EESSEEEEC-----CCCCSCCCCGGGCCHHHHHTSC------------------CCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred ECCCCCCEECCCCCCCCCCCCCCCCCCCHHHHCCCC------------------CCCCCCCCCHHHHHHHHHHCCCCCCC
T ss_conf 623663433268876304544181507999965688------------------78777636119999999859899898
Q ss_pred CC
Q ss_conf 88
Q 001678 1030 FS 1031 (1033)
Q Consensus 1030 ~s 1031 (1033)
.+
T Consensus 229 ~~ 230 (304)
T 3ubd_A 229 KD 230 (304)
T ss_dssp SS
T ss_pred CC
T ss_conf 49
No 6
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=1.00 E-value=1 Score=347.35 Aligned_cols=210 Identities=31% Similarity=0.507 Sum_probs=178.3
Q ss_pred CCCCCCCCCCEEEEEECCCCCEEEEEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEE
Q ss_conf 02333588813999964248379999998596259998303334899246899999999999999716999800388999
Q 001678 793 GLQTIKNDDLEEVRELGSGTYGSVYHGKWRGSDVAIKRIKASCFAGKPSERERLIADFWKEALLLSSLHHPNVVSFYGIV 872 (1033)
Q Consensus 793 ~~~~I~~~dYeiLkkLGkGsFGtVYkAk~kGtkVAIKvik~s~l~~k~~erer~ik~FlkEi~ILkkL~HPNIVkLlGvf 872 (1033)
..|++..+++++.++||+|+||+||+|++++ .||||+++.... .....+.|.+|+.++++++|||||++++++
T Consensus 29 ~~Wei~~~~l~l~~~iG~G~fG~Vy~~~~~~-~vAvK~~~~~~~------~~~~~~~f~~E~~il~~l~HpNIV~l~g~~ 101 (307)
T 3omv_A 29 YYWEIEASEVMLSTRIGSGSFGTVYKGKWHG-DVAVKILKVVDP------TPEQFQAFRNEVAVLRKTRHVNILLFMGYM 101 (307)
T ss_dssp CCCBCCTTSCCEEEECCCCSSSEEEEEESSS-EEEEEECCCSSC------CHHHHHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred CCCEECHHHEEEEEEEEECCCCEEEEEEECC-CEEEEEEEECCC------CHHHHHHHHHHHHHHHHCCCCCEEEEEEEE
T ss_conf 6708747994984498208886899999899-689999972689------999999999999999858998874699999
Q ss_pred ECCCCCCEEEEEEECCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCEEEEE
Q ss_conf 81899955999842147708999973277658999999999999999999949942157999967980589999909998
Q 001678 873 RDGPDGSLATVTEFMVNGSLKQFLQKKDRTIDRRKRLIIAMDAAFGMEYLHGKNIVHFDLKCENLLVNMRDPQRPVCKIG 952 (1033)
Q Consensus 873 ~e~e~g~l~LVmEYiegGSL~dlLkk~~k~lse~~il~IA~QIlkALeYLHskGIIHRDIKPsNILLd~~~~~~g~VKLi 952 (1033)
.+ +.++||||||++|+|.++|......+++..++.|+.||+.||.|||+++||||||||+||||+ .++.+||+
T Consensus 102 ~~---~~~~iVmEy~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~----~~~~~Ki~ 174 (307)
T 3omv_A 102 TK---DNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLH----EGLTVKIG 174 (307)
T ss_dssp CS---SSCEEEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEE----TTEEEEEC
T ss_pred EC---CEEEEEEECCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEC----CCCCEEEE
T ss_conf 78---958999974899878898752489999999999999999999999779952785578997888----99908994
Q ss_pred ECCCCCCCCCC---CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCC
Q ss_conf 44884113455---334776788864464102588766530232100002103577434408999999999906999989
Q 001678 953 DLGLSKVKQQT---LVSGGVRGTLPWMAPELLSGKSHMVTEKVTLFSLKFCCFQLKWSYDCYSLGILFFFLQFILCFIDF 1029 (1033)
Q Consensus 953 DFGLAk~~~~~---~~s~~~~GT~~YmAPEvl~gk~~~~t~ksDIwSLGi~L~eittkvDIWSLGVILYeLLTGk~PFd~ 1029 (1033)
|||+|+..... ......+||+.|||||++.+.... .|+.++|||||||++|+|+||+.||.-
T Consensus 175 DFGla~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~---------------~y~~ksDVwS~Gvvl~Elltg~~Pf~~ 239 (307)
T 3omv_A 175 DFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNN---------------PFSFQSDVYSYGIVLYELMTGELPYSH 239 (307)
T ss_dssp CCSSCBC------------CCCCTTSCCHHHHHCCSSC---------------CCCHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred ECCCCEECCCCCCCEEECCCCCCCCCCCHHHHHCCCCC---------------CCCCHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 41575424667764031564468772498786146899---------------878687757289999999978899899
Q ss_pred CC
Q ss_conf 88
Q 001678 1030 FS 1031 (1033)
Q Consensus 1030 ~s 1031 (1033)
.+
T Consensus 240 ~~ 241 (307)
T 3omv_A 240 IN 241 (307)
T ss_dssp CC
T ss_pred CC
T ss_conf 99
No 7
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=1.00 E-value=1 Score=346.51 Aligned_cols=208 Identities=25% Similarity=0.297 Sum_probs=174.9
Q ss_pred CCCCCCCCEEEEEECCCCCEEEEEEEE--CCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEE
Q ss_conf 333588813999964248379999998--596259998303334899246899999999999999716999800388999
Q 001678 795 QTIKNDDLEEVRELGSGTYGSVYHGKW--RGSDVAIKRIKASCFAGKPSERERLIADFWKEALLLSSLHHPNVVSFYGIV 872 (1033)
Q Consensus 795 ~~I~~~dYeiLkkLGkGsFGtVYkAk~--kGtkVAIKvik~s~l~~k~~erer~ik~FlkEi~ILkkL~HPNIVkLlGvf 872 (1033)
..+..++|++++.||+|+||.||+|++ +++.||||++.+..+..+.. .........++.+++.++|||||+++++|
T Consensus 184 ~~~slddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~--~~~~~~E~~~l~ll~~~~HP~IV~l~~~f 261 (689)
T 3v5w_A 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQG--ETLALNERIMLSLVSTGDCPFIVCMSYAF 261 (689)
T ss_dssp CCCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTC--HHHHHHHHHHHHHHSSSCCTTBCCEEEEE
T ss_pred CCCCHHHEEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCCHHHH--HHHHHHHHHHHHHHHHCCCCCEEEEEEEE
T ss_conf 9995689288889831648399999999999899999975788252556--89999999999999648999871799999
Q ss_pred ECCCCCCEEEEEEECCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCEEEEE
Q ss_conf 81899955999842147708999973277658999999999999999999949942157999967980589999909998
Q 001678 873 RDGPDGSLATVTEFMVNGSLKQFLQKKDRTIDRRKRLIIAMDAAFGMEYLHGKNIVHFDLKCENLLVNMRDPQRPVCKIG 952 (1033)
Q Consensus 873 ~e~e~g~l~LVmEYiegGSL~dlLkk~~k~lse~~il~IA~QIlkALeYLHskGIIHRDIKPsNILLd~~~~~~g~VKLi 952 (1033)
++ .+.+|+||||+.||+|.++|.+.+. +++..+..++.||+.||.|||+++||||||||+||||+ .++.+||+
T Consensus 262 ~~--~~~lylVmEy~~GGdL~~~l~~~~~-l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld----~~G~vKL~ 334 (689)
T 3v5w_A 262 HT--PDKLSFILDLMNGGDLHYHLSQHGV-FSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLD----EHGHVRIS 334 (689)
T ss_dssp EC--SSEEEEEECCCCSCBHHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEEC----TTSCEEEC
T ss_pred EE--CCEEEEEEECCCCCCHHHHHHHCCC-CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEE----CCCCEEEC
T ss_conf 98--9988999946899829999986699-99999999999999999999978854168866875980----89988964
Q ss_pred ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCC
Q ss_conf 44884113455334776788864464102588766530232100002103577434408999999999906999989
Q 001678 953 DLGLSKVKQQTLVSGGVRGTLPWMAPELLSGKSHMVTEKVTLFSLKFCCFQLKWSYDCYSLGILFFFLQFILCFIDF 1029 (1033)
Q Consensus 953 DFGLAk~~~~~~~s~~~~GT~~YmAPEvl~gk~~~~t~ksDIwSLGi~L~eittkvDIWSLGVILYeLLTGk~PFd~ 1029 (1033)
|||+|+...... ....+||+.|||||++.... .|+.++||||||||+|+|++|.+||..
T Consensus 335 DFGlA~~~~~~~-~~t~~GTp~YmAPEvl~~~~-----------------~y~~~vDiWSLGvilYEmLtG~~PF~~ 393 (689)
T 3v5w_A 335 DLGLACDFSKKK-PHASVGTHGYMAPEVLQKGV-----------------AYDSSADWFSLGCMLFKLLRGHSPFRQ 393 (689)
T ss_dssp CCTTCEECSSCC-CCSCCSCGGGCCHHHHSTTC-----------------CCCTHHHHHHHHHHHHHHHHSSCTTCG
T ss_pred CCCEEEECCCCC-CCCCCCCCCCCCHHHHHCCC-----------------CCCCHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 565566637898-77765786731889984799-----------------999599999999999999868799999
No 8
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=1.00 E-value=1 Score=344.82 Aligned_cols=196 Identities=24% Similarity=0.358 Sum_probs=169.9
Q ss_pred CCCCCEEEEEECCCCCEEEEEEEEC--CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECC
Q ss_conf 5888139999642483799999985--96259998303334899246899999999999999716999800388999818
Q 001678 798 KNDDLEEVRELGSGTYGSVYHGKWR--GSDVAIKRIKASCFAGKPSERERLIADFWKEALLLSSLHHPNVVSFYGIVRDG 875 (1033)
Q Consensus 798 ~~~dYeiLkkLGkGsFGtVYkAk~k--GtkVAIKvik~s~l~~k~~erer~ik~FlkEi~ILkkL~HPNIVkLlGvf~e~ 875 (1033)
..+.|++.++||+|+||.||+|+++ ++.||||+++.... +.+|+.+++.++|||||+++++|.+
T Consensus 56 ~~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-------------~~~E~~il~~l~HpnIV~l~~~~~~- 121 (336)
T 4g3f_A 56 EVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-------------RVEELVACAGLSSPRIVPLYGAVRE- 121 (336)
T ss_dssp TTTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-------------CTHHHHTTTTCCCTTBCCEEEEEEE-
T ss_pred CHHHEEECCEECCCCCEEEEEEEECCCCCEEEEEEECHHHH-------------HHHHHHHHHHCCCCCCCCEEEEEEE-
T ss_conf 53351768685138780999999889998999999788886-------------9999999985799899939999998-
Q ss_pred CCCCEEEEEEECCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCC-EEEEEEC
Q ss_conf 999559998421477089999732776589999999999999999999499421579999679805899999-0999844
Q 001678 876 PDGSLATVTEFMVNGSLKQFLQKKDRTIDRRKRLIIAMDAAFGMEYLHGKNIVHFDLKCENLLVNMRDPQRP-VCKIGDL 954 (1033)
Q Consensus 876 e~g~l~LVmEYiegGSL~dlLkk~~k~lse~~il~IA~QIlkALeYLHskGIIHRDIKPsNILLd~~~~~~g-~VKLiDF 954 (1033)
.+.+|||||||++|+|.++|++.+ .+++..++.|+.||+.||.|||+++||||||||+||||+ .++ .+||+||
T Consensus 122 -~~~~~ivmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~----~~g~~vKl~DF 195 (336)
T 4g3f_A 122 -GPWVNIFMELLEGGSLGQLIKQMG-CLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLS----SDGSRAALCDF 195 (336)
T ss_dssp -TTEEEEEECCCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEEC----TTSCCEEECCC
T ss_pred -CCEEEEEEECCCCCCHHHHHHHCC-CCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHEEEE----CCCCEEEEEEC
T ss_conf -999999996659986999998769-999999999999999999999988904261677887995----89997999627
Q ss_pred CCCCCCCCCC------CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCCC
Q ss_conf 8841134553------3477678886446410258876653023210000210357743440899999999990699998
Q 001678 955 GLSKVKQQTL------VSGGVRGTLPWMAPELLSGKSHMVTEKVTLFSLKFCCFQLKWSYDCYSLGILFFFLQFILCFID 1028 (1033)
Q Consensus 955 GLAk~~~~~~------~s~~~~GT~~YmAPEvl~gk~~~~t~ksDIwSLGi~L~eittkvDIWSLGVILYeLLTGk~PFd 1028 (1033)
|+|+...... ....++||+.|||||++.++. |+.++|||||||++|+|++|++||.
T Consensus 196 Gla~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~------------------y~~~~DiwSlGvilyemltG~~Pf~ 257 (336)
T 4g3f_A 196 GHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKP------------------CDAKVDIWSSCCMMLHMLNGCHPWT 257 (336)
T ss_dssp TTCEEC------------CCCCCCGGGCCHHHHTTCC------------------CCTHHHHHHHHHHHHHHHHSSCSST
T ss_pred CCCEECCCCCCCCCEECCCCCCCCCCCCCHHHHCCCC------------------CCCHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 8776856787654022178545580200899988999------------------8908999999999999997869989
Q ss_pred CCC
Q ss_conf 988
Q 001678 1029 FFS 1031 (1033)
Q Consensus 1029 ~~s 1031 (1033)
-.+
T Consensus 258 ~~~ 260 (336)
T 4g3f_A 258 QYF 260 (336)
T ss_dssp TTC
T ss_pred CCC
T ss_conf 989
No 9
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=1.00 E-value=1 Score=343.88 Aligned_cols=206 Identities=33% Similarity=0.499 Sum_probs=175.8
Q ss_pred CCCCCCCCCEEEEEECCCCCEEEEEEEEC-------CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 23335888139999642483799999985-------96259998303334899246899999999999999716999800
Q 001678 794 LQTIKNDDLEEVRELGSGTYGSVYHGKWR-------GSDVAIKRIKASCFAGKPSERERLIADFWKEALLLSSLHHPNVV 866 (1033)
Q Consensus 794 ~~~I~~~dYeiLkkLGkGsFGtVYkAk~k-------GtkVAIKvik~s~l~~k~~erer~ik~FlkEi~ILkkL~HPNIV 866 (1033)
.+.+..++|.+.++||+|+||+||+|++. +..||||+++... ....+.|.+|+.++++++|||||
T Consensus 7 ~~~I~r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~--------~~~~~~f~~E~~il~~l~HpnIV 78 (299)
T 4asz_A 7 VQHIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS--------DNARKDFHREAELLTNLQHEHIV 78 (299)
T ss_dssp CCBCCGGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCC--------HHHHHHHHHHHHHHTTCCCTTBC
T ss_pred HCCCCHHHEEEEEEEEECCCCEEEEEEECCCCCCCCCEEEEEEEECCCC--------HHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 4414888929824982078829999998776667788799999967778--------58999999999999858998886
Q ss_pred EEEEEEECCCCCCEEEEEEECCCCCHHHHHHHCC------------CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 3889998189995599984214770899997327------------7658999999999999999999949942157999
Q 001678 867 SFYGIVRDGPDGSLATVTEFMVNGSLKQFLQKKD------------RTIDRRKRLIIAMDAAFGMEYLHGKNIVHFDLKC 934 (1033)
Q Consensus 867 kLlGvf~e~e~g~l~LVmEYiegGSL~dlLkk~~------------k~lse~~il~IA~QIlkALeYLHskGIIHRDIKP 934 (1033)
+++|+|.+ .+.++||||||++|+|.++|++.+ ..+++..++.|+.||+.||.|||+++||||||||
T Consensus 79 ~l~g~~~~--~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp 156 (299)
T 4asz_A 79 KFYGVCVE--GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLAT 156 (299)
T ss_dssp CEEEEECS--SSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSG
T ss_pred CEEEEEEE--CCEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
T ss_conf 28799956--9989999985899968999986086421112357778899999999999999999999759904676577
Q ss_pred CCEEEECCCCCCCEEEEEECCCCCCCCCCC---CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHCCCCCCCCHH
Q ss_conf 967980589999909998448841134553---34776788864464102588766530232100002103577434408
Q 001678 935 ENLLVNMRDPQRPVCKIGDLGLSKVKQQTL---VSGGVRGTLPWMAPELLSGKSHMVTEKVTLFSLKFCCFQLKWSYDCY 1011 (1033)
Q Consensus 935 sNILLd~~~~~~g~VKLiDFGLAk~~~~~~---~s~~~~GT~~YmAPEvl~gk~~~~t~ksDIwSLGi~L~eittkvDIW 1011 (1033)
+|||++ .++.+||+|||+|+...... ......||+.|||||++.+.. ++.++|||
T Consensus 157 ~NILl~----~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~------------------~~~k~DVw 214 (299)
T 4asz_A 157 RNCLVG----ENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRK------------------FTTESDVW 214 (299)
T ss_dssp GGEEEC----GGGCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCC------------------CCHHHHHH
T ss_pred HHEEEC----CCCCEEECCCCCCEECCCCCCEEECCCEECCHHHCCHHHHCCCC------------------CCCHHHHH
T ss_conf 638987----99868988730010067887416647513470103889870799------------------97036677
Q ss_pred HHHHHHHHHHC-CCCCCCCCC
Q ss_conf 99999999990-699998988
Q 001678 1012 SLGILFFFLQF-ILCFIDFFS 1031 (1033)
Q Consensus 1012 SLGVILYeLLT-Gk~PFd~~s 1031 (1033)
||||++|||+| |+.||.-.+
T Consensus 215 S~Gvvl~Ellt~G~~Pf~~~~ 235 (299)
T 4asz_A 215 SLGVVLWEIFTYGKQPWYQLS 235 (299)
T ss_dssp HHHHHHHHHHTTTCCTTTTSC
T ss_pred HHHHHHHHHHCCCCCCCCCCC
T ss_conf 889999999808999999989
No 10
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=1.00 E-value=1 Score=341.41 Aligned_cols=207 Identities=32% Similarity=0.473 Sum_probs=176.0
Q ss_pred CCCCCCCCCCEEEEEECCCCCEEEEEEEEC-------CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 023335888139999642483799999985-------9625999830333489924689999999999999971699980
Q 001678 793 GLQTIKNDDLEEVRELGSGTYGSVYHGKWR-------GSDVAIKRIKASCFAGKPSERERLIADFWKEALLLSSLHHPNV 865 (1033)
Q Consensus 793 ~~~~I~~~dYeiLkkLGkGsFGtVYkAk~k-------GtkVAIKvik~s~l~~k~~erer~ik~FlkEi~ILkkL~HPNI 865 (1033)
....+..++|.+.++||+|+||+||+|+++ +..||||+++.. .....+.|.+|+.+|++++||||
T Consensus 34 ~~~~i~~~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~--------~~~~~~~f~~E~~il~~l~HpnI 105 (329)
T 4aoj_A 34 CVHHIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA--------SESARQDFQREAELLTMLQHQHI 105 (329)
T ss_dssp CSCBCCGGGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCC--------SHHHHHHHHHHHHHHTTCCCTTB
T ss_pred HHCCCCHHHEEEEEEECCCCCCEEEEEEECCCCCCCCCEEEEEEEECCC--------CHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 5330678992887797147784899899878665778969999997757--------97999999999999985899899
Q ss_pred CEEEEEEECCCCCCEEEEEEECCCCCHHHHHHHCC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 03889998189995599984214770899997327--------------7658999999999999999999949942157
Q 001678 866 VSFYGIVRDGPDGSLATVTEFMVNGSLKQFLQKKD--------------RTIDRRKRLIIAMDAAFGMEYLHGKNIVHFD 931 (1033)
Q Consensus 866 VkLlGvf~e~e~g~l~LVmEYiegGSL~dlLkk~~--------------k~lse~~il~IA~QIlkALeYLHskGIIHRD 931 (1033)
|+++|+|.+ ...++||||||++|+|.+++++.. ..+++..++.|+.||+.||.|||+++|||||
T Consensus 106 V~l~g~~~~--~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRD 183 (329)
T 4aoj_A 106 VRFFGVCTE--GRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRD 183 (329)
T ss_dssp CCEEEEECS--SSSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred CCEEEEEEE--CCEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCC
T ss_conf 969899998--998999998279993999998607541001221124578899999999999999999998408842266
Q ss_pred CCCCCEEEECCCCCCCEEEEEECCCCCCCCCCC---CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHCCCCCCC
Q ss_conf 999967980589999909998448841134553---34776788864464102588766530232100002103577434
Q 001678 932 LKCENLLVNMRDPQRPVCKIGDLGLSKVKQQTL---VSGGVRGTLPWMAPELLSGKSHMVTEKVTLFSLKFCCFQLKWSY 1008 (1033)
Q Consensus 932 IKPsNILLd~~~~~~g~VKLiDFGLAk~~~~~~---~s~~~~GT~~YmAPEvl~gk~~~~t~ksDIwSLGi~L~eittkv 1008 (1033)
|||+||||+ .++.+||+|||+|+...... .....+||+.|||||++.+.. ++.++
T Consensus 184 LKp~NILl~----~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~------------------~~~~s 241 (329)
T 4aoj_A 184 LATRNCLVG----QGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRK------------------FTTES 241 (329)
T ss_dssp CCGGGEEEE----TTTEEEECCCC----------------CCCCGGGCCHHHHTTCC------------------CCHHH
T ss_pred CCHHHEEEC----CCCCEEECCCCCCEECCCCCCCEECCCCCCCCCCCCHHHHCCCC------------------CCCCC
T ss_conf 667648988----99968976660333656787530047645565665826544799------------------99663
Q ss_pred CHHHHHHHHHHHHC-CCCCCCCCC
Q ss_conf 40899999999990-699998988
Q 001678 1009 DCYSLGILFFFLQF-ILCFIDFFS 1031 (1033)
Q Consensus 1009 DIWSLGVILYeLLT-Gk~PFd~~s 1031 (1033)
|||||||++|||+| |+.||.-.+
T Consensus 242 DvwS~Gvvl~Ellt~G~~Pf~~~~ 265 (329)
T 4aoj_A 242 DVWSFGVVLWEIFTYGKQPWYQLS 265 (329)
T ss_dssp HHHHHHHHHHHHHTTSCCTTCSSC
T ss_pred CCCCHHHHHHHHHCCCCCCCCCCC
T ss_conf 001057899999828999999989
Done!