Your job contains 1 sequence.
>001681
MKRSRDEVYMNSQIKRPMISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQ
DKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLED
EQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALF
QDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQVHVDKKERAMASHA
DRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERRDDHRRERERDDRDFENDVNRDFSMQ
RFPHKRKSARKIEDSTAEPLHQGGEGDENFGMHPVSSSYDDKNAMKSMFSQELSFCEKVK
DKLRDDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLARCEKSEELLA
DVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRLDKSVAFVNKDVG
PKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWV
SVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIK
TDGPIRVEDHFTALNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCR
SDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAI
AAGNRRSIVPHLEFEYSDPDIHEDLYQLIKYSCGEMCTTEQLDKVMKIWTTFLEPMLGVP
SRPQGAEDTEDVVKAKSHTVKSRAASVGDSDGSPDGDAAAMTSKHSNPSRNGDESIPPEQ
SSSSRAWLPNGDHGIKEDVSVEADHNARKSDNFCDSSEQDKVQNNAAMADETSGISKQAS
TNERLIGTNAAIAAAADQSNGRSNIENTSGLSVAHSRPGNHIVEGGLELRSSNEILPSSE
GGECSRQNISTNGVMTEGAKILRYNAESVKQFKIEREEGELSPNGDFEEDNFAVYGESGL
EAVHKAKDWCC
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 001681
(1031 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2100277 - symbol:SNL1 "AT3G01320" species:3702... 1217 2.6e-224 3
TAIR|locus:2147845 - symbol:SNL2 "AT5G15020" species:3702... 1116 1.9e-217 3
ZFIN|ZDB-GENE-070620-3 - symbol:sin3aa "SIN3 homolog A, t... 473 4.4e-86 4
UNIPROTKB|F1SJ69 - symbol:SIN3A "Uncharacterized protein"... 473 1.4e-85 4
UNIPROTKB|F1MTR3 - symbol:SIN3A "Uncharacterized protein"... 473 1.8e-85 4
DICTYBASE|DDB_G0281045 - symbol:DDB_G0281045 "paired amph... 506 3.5e-85 5
UNIPROTKB|J9P8L1 - symbol:SIN3A "Uncharacterized protein"... 473 3.8e-85 4
MGI|MGI:107157 - symbol:Sin3a "transcriptional regulator,... 473 3.8e-85 4
RGD|1311598 - symbol:Sin3a "SIN3 transcription regulator ... 473 4.0e-85 4
UNIPROTKB|Q96ST3 - symbol:SIN3A "Paired amphipathic helix... 473 6.1e-85 4
UNIPROTKB|E1BX21 - symbol:SIN3A "Uncharacterized protein"... 473 1.6e-84 4
ZFIN|ZDB-GENE-030131-2066 - symbol:sin3ab "SIN3 homolog A... 450 6.4e-83 4
UNIPROTKB|F1PH07 - symbol:SIN3A "Uncharacterized protein"... 473 2.0e-81 4
UNIPROTKB|E1BGW5 - symbol:LOC520505 "Uncharacterized prot... 469 4.3e-79 5
ZFIN|ZDB-GENE-030131-8264 - symbol:sin3b "SIN3 homolog B,... 466 2.8e-78 4
FB|FBgn0022764 - symbol:Sin3A "Sin3A" species:7227 "Droso... 432 2.5e-72 5
SGD|S000005364 - symbol:SIN3 "Component of the Sin3p-Rpd3... 370 8.8e-69 4
MGI|MGI:107158 - symbol:Sin3b "transcriptional regulator,... 478 5.0e-68 3
UNIPROTKB|J9NXS4 - symbol:SIN3B "Uncharacterized protein"... 469 1.5e-67 3
UNIPROTKB|F1NMJ8 - symbol:SIN3B "Uncharacterized protein"... 480 4.3e-67 4
UNIPROTKB|F1S9U7 - symbol:SIN3B "Uncharacterized protein"... 469 2.3e-65 4
UNIPROTKB|O75182 - symbol:SIN3B "Paired amphipathic helix... 391 1.7e-63 4
UNIPROTKB|F1PN34 - symbol:SIN3B "Uncharacterized protein"... 391 6.8e-63 4
ASPGD|ASPL0000051511 - symbol:AN1546 species:162425 "Emer... 307 6.1e-61 4
POMBASE|SPBC12C2.10c - symbol:pst1 "Clr6 histone deacetyl... 351 9.0e-59 4
TAIR|locus:2032397 - symbol:AT1G24200 "AT1G24200" species... 522 2.3e-49 1
POMBASE|SPBC1734.16c - symbol:pst3 "SIN3 family co-repres... 232 6.8e-47 4
TAIR|locus:2020603 - symbol:AT1G70030 "AT1G70030" species... 456 3.2e-42 1
POMBASE|SPAC23C11.15 - symbol:pst2 "Clr6 histone deacetyl... 289 6.4e-33 4
TAIR|locus:2032442 - symbol:AT1G24230 "AT1G24230" species... 361 5.3e-32 1
TAIR|locus:2165887 - symbol:AT5G35610 "AT5G35610" species... 325 3.8e-28 1
UNIPROTKB|O01319 - symbol:sin-3 "Protein SIN-3, isoform a... 215 5.5e-28 2
WB|WBGene00004117 - symbol:sin-3 species:6239 "Caenorhabd... 215 5.6e-28 2
UNIPROTKB|A5JYW9 - symbol:sin-3 "Protein SIN-3, isoform b... 215 5.6e-28 2
TAIR|locus:2015919 - symbol:AT1G27280 "AT1G27280" species... 294 8.1e-25 1
TAIR|locus:2032362 - symbol:AT1G24250 "AT1G24250" species... 179 4.4e-22 2
TAIR|locus:2032422 - symbol:AT1G24210 "AT1G24210" species... 167 2.5e-21 2
TAIR|locus:2015994 - symbol:AT1G27260 "AT1G27260" species... 229 2.1e-20 2
TAIR|locus:2015899 - symbol:AT1G27270 "AT1G27270" species... 161 2.3e-18 2
TAIR|locus:2032427 - symbol:AT1G24220 "AT1G24220" species... 171 3.7e-17 2
TAIR|locus:2118116 - symbol:WRKY19 species:3702 "Arabidop... 265 1.1e-16 3
TAIR|locus:2205754 - symbol:AT1G27220 species:3702 "Arabi... 217 1.4e-16 1
TAIR|locus:2016024 - symbol:AT1G27250 "AT1G27250" species... 210 7.8e-16 1
TAIR|locus:2147870 - symbol:AT5G15040 "AT5G15040" species... 189 1.4e-13 1
TAIR|locus:2034860 - symbol:AT1G23810 "AT1G23810" species... 178 2.1e-12 1
UNIPROTKB|H3BP90 - symbol:SIN3A "Paired amphipathic helix... 165 5.0e-11 1
TAIR|locus:2015949 - symbol:AT1G27240 "AT1G27240" species... 156 4.6e-10 1
TAIR|locus:2090744 - symbol:AT3G28870 "AT3G28870" species... 146 8.5e-07 1
TAIR|locus:2087203 - symbol:AT3G24260 "AT3G24260" species... 113 0.00058 2
>TAIR|locus:2100277 [details] [associations]
symbol:SNL1 "AT3G01320" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0000956
"nuclear-transcribed mRNA catabolic process" evidence=RCA]
[GO:0007346 "regulation of mitotic cell cycle" evidence=RCA]
[GO:0010048 "vernalization response" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0010413 "glucuronoxylan metabolic process"
evidence=RCA] [GO:0016926 "protein desumoylation" evidence=RCA]
[GO:0043481 "anthocyanin accumulation in tissues in response to UV
light" evidence=RCA] [GO:0045492 "xylan biosynthetic process"
evidence=RCA] [GO:0048440 "carpel development" evidence=RCA]
[GO:0050665 "hydrogen peroxide biosynthetic process" evidence=RCA]
InterPro:IPR003822 Pfam:PF02671 PROSITE:PS51477 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0045892 GO:GO:0006351
EMBL:AC010676 Gene3D:1.20.1160.11 SUPFAM:SSF47762 eggNOG:COG5602
KO:K11644 InterPro:IPR013194 Pfam:PF08295 SMART:SM00761
IPI:IPI00521144 RefSeq:NP_186781.4 UniGene:At.41297 HSSP:Q62141
ProteinModelPortal:Q9SRH9 SMR:Q9SRH9 IntAct:Q9SRH9 STRING:Q9SRH9
PaxDb:Q9SRH9 PRIDE:Q9SRH9 EnsemblPlants:AT3G01320.1 GeneID:821265
KEGG:ath:AT3G01320 TAIR:At3g01320 HOGENOM:HOG000030343 OMA:SKPENSA
ProtClustDB:CLSN2681550 Genevestigator:Q9SRH9 Uniprot:Q9SRH9
Length = 1372
Score = 1217 (433.5 bits), Expect = 2.6e-224, Sum P(3) = 2.6e-224
Identities = 257/543 (47%), Positives = 343/543 (63%)
Query: 489 KDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSED 548
K +Y+ K IQELDLS+CE CTPSYRLLP +Y IP ASQR+ELGAEVLNDHWVSVTSGSED
Sbjct: 452 KKEYMGKSIQELDLSDCECCTPSYRLLPADYPIPIASQRSELGAEVLNDHWVSVTSGSED 511
Query: 549 YSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVE 608
YSFKHMR+NQYEESLFRCEDDRFELDMLLESV+ + E LL I I G R+E
Sbjct: 512 YSFKHMRRNQYEESLFRCEDDRFELDMLLESVSSAARSAESLLNIITEKKISFSGSFRIE 571
Query: 609 DHFTALNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWA 668
DHFTALNLRCIERLYGDHGLDV+D+L KN + ALPVILTRLKQKQ EW +CR DF+KVWA
Sbjct: 572 DHFTALNLRCIERLYGDHGLDVIDILNKNPATALPVILTRLKQKQGEWKKCRDDFDKVWA 631
Query: 669 EIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAXXXXXXXXXXXXDDVLLAIAAGNRRSI 728
+Y+KN++KSLDHRSFYFKQQDSK+L AK+L A DDVLL+I+AG R+ I
Sbjct: 632 NVYAKNHYKSLDHRSFYFKQQDSKNLSAKSLLAEIKELKEKSQNDDDVLLSISAGYRQPI 691
Query: 729 VPHLEFEYSDPDIHEDLYQLIKYSCGEMCTT-EQLDKVMKIWTTFLEPMLGVPSRPQGAE 787
P+LE+EY + IHED+++++++SC E+C+T EQL KV+++W FLE +LGVP R +G +
Sbjct: 692 NPNLEYEYLNRAIHEDMFKVVQFSCEELCSTKEQLSKVLRLWENFLEAVLGVPPRAKGTD 751
Query: 788 DTEDVV-KAKSHTVKSRXXXXXXXXXXXXXXXXXMTSKHSNPSRNGDESIPPEQSSSSRA 846
EDVV K+ V + S+ + NGDE+ +
Sbjct: 752 LVEDVVINPKTLDVNHSTSPNGEAAVSSGGDTARLASRKLKSAANGDEN-SSSGTFKHGI 810
Query: 847 WLPNGDHGIKEDVS-VEADHNARKSDNFCDSSEQDKVQNNAAMADETSGISKQASTNERL 905
L N D KE++ VE A + C + + K Q A++ G +ER
Sbjct: 811 GLLNKDSTGKENLEDVEI---ANRDGVACSAVKPQKEQETGNEAEKRFGKPIPMDISERA 867
Query: 906 IGTNXXXXXXXDQSNGRSNIENTSGLSVAHSRPGNHIVEGGLELRSSNEILPSSEGGECS 965
++ + ++ E G ++P + + + ++ S E + S++GG+
Sbjct: 868 AISSISIPSGAENNHCVVGKEVLPGAHEIQAKPSDTLTDIHHDV-DSIETVHSTQGGDVG 926
Query: 966 RQNISTNGVMTEGAKILRYNAESVKQFKIEREEGELSPNGDFEEDNFAVYGESGLEAVHK 1025
+ NG+ ++ +K R + + + E+EEGELSPNGDFE DNF VY + G+++ K
Sbjct: 927 NSIVLANGLRSDSSKGTRNSDDPEGPSRNEKEEGELSPNGDFE-DNFGVYKDHGVKSTSK 985
Query: 1026 AKD 1028
++
Sbjct: 986 PEN 988
Score = 717 (257.5 bits), Expect = 2.6e-224, Sum P(3) = 2.6e-224
Identities = 157/270 (58%), Positives = 189/270 (70%)
Query: 1 MKRSRDEVYMN-SQIKRPMISSRGEPSGQTQVVXXXXXXX---------AQKLTTNDALA 50
MKR RD+VY + SQ +RP+ SSRG+ GQ+ V +QKLTTNDAL+
Sbjct: 1 MKRIRDDVYASGSQFRRPLGSSRGQLCGQSPVHGSGDTEEEEEGGSRRVSQKLTTNDALS 60
Query: 51 YLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPK 110
YL+ VK++FQD+REKYD FLEVMKDFKAQR DT GVIARVKELFKGH +LI GFNTFLPK
Sbjct: 61 YLREVKEMFQDQREKYDRFLEVMKDFKAQRTDTGGVIARVKELFKGHNNLIYGFNTFLPK 120
Query: 111 GYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSIT 170
GYEITL +E++ PKK VEFE+AINFVNKIK RF+ D+HVYKSFL+ILNMYRKENK I
Sbjct: 121 GYEITL-IEEDDALPKKTVEFEQAINFVNKIKMRFKHDEHVYKSFLEILNMYRKENKEIK 179
Query: 171 EVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQVHVD 230
EVY EV LFQ H DLLE+FT FLP S + S + DR S P Q+ V+
Sbjct: 180 EVYNEVSILFQGHLDLLEQFTRFLPASLPSHSAAQHSRSQAQQYSDRGSDPPLLHQMQVE 239
Query: 231 KKERAMASHADR-DLSVDRPDPDHDRVLLK 259
K+ R + A R D SV+R D + D+ ++K
Sbjct: 240 KERRRERAVALRGDYSVERYDLNDDKTMVK 269
Score = 271 (100.5 bits), Expect = 2.6e-224, Sum P(3) = 2.6e-224
Identities = 63/144 (43%), Positives = 90/144 (62%)
Query: 298 SMQRFPHKRKSARKIEDSTAEPLHQGGEGDENFGMHPVSSSYDDKNAMKSMFSQELSFCE 357
++ FP KRKS+R+ E A + G S+S+ +K+ +KSM+ Q FCE
Sbjct: 299 NLHHFPEKRKSSRRAEALEA---YSG------------SASHSEKDNLKSMYKQAFVFCE 343
Query: 358 KVKDKL--RDDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLARCEKS 415
KVKD+L +DDYQ FL+CL++++ II R +LQ+LV DLLG++PDLMD FN F RCE
Sbjct: 344 KVKDRLCSQDDYQTFLKCLNIFSNGIIQRKDLQNLVSDLLGKFPDLMDEFNQFFERCESI 403
Query: 416 EE---LLADVMSKKSLWNEGRIPK 436
+ LA VMSKK +E ++ +
Sbjct: 404 TDGFQRLAGVMSKKLFSSEEQLSR 427
Score = 87 (35.7 bits), Expect = 7.7e-131, Sum P(2) = 7.7e-131
Identities = 24/74 (32%), Positives = 39/74 (52%)
Query: 340 DDKNAMKSM-FSQELSFCEKVKDKLRDD---YQEFLRCLHLYTKEIITRSELQSLVGDLL 395
DD K++ F Q ++F K+K + + D Y+ FL L++Y KE E+ + V L
Sbjct: 130 DDALPKKTVEFEQAINFVNKIKMRFKHDEHVYKSFLEILNMYRKENKEIKEVYNEVSILF 189
Query: 396 GRYPDLMDGFNGFL 409
+ DL++ F FL
Sbjct: 190 QGHLDLLEQFTRFL 203
Score = 81 (33.6 bits), Expect = 2.4e-101, Sum P(3) = 2.4e-101
Identities = 34/142 (23%), Positives = 58/142 (40%)
Query: 821 MTSKHSNPSRNGDESIPPEQSSSSRAWL-PNGDHGIKEDVSVEADHNARKSDNFCDSSEQ 879
+ S S +RN D+ P ++ L PNGD +++ V DH KS + ++S +
Sbjct: 935 LRSDSSKGTRNSDDPEGPSRNEKEEGELSPNGD--FEDNFGVYKDHGV-KSTSKPENSAE 991
Query: 880 DKVQNNAAMADETSGISKQASTNERLIGTNXXXXX-XXDQSNGRSNIENTSGLSVAHSRP 938
+V+ +A + +E + GT D+ N E+ A S
Sbjct: 992 AEVEADAEVENEDDADDVDSENASEASGTESGGDVCSQDEDREEENGEHDEIDGKAESEG 1051
Query: 939 GNHIVEGGLELRSSNEILPSSE 960
++ L L +E+LP SE
Sbjct: 1052 EAEGMDPHL-LEGESELLPQSE 1072
Score = 79 (32.9 bits), Expect = 5.4e-130, Sum P(2) = 5.4e-130
Identities = 19/63 (30%), Positives = 31/63 (49%)
Query: 131 FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEF 190
+++A F K+K R D Y++FL LN++ ++ V L PDL++EF
Sbjct: 335 YKQAFVFCEKVKDRLCSQDD-YQTFLKCLNIFSNGIIQRKDLQNLVSDLLGKFPDLMDEF 393
Query: 191 THF 193
F
Sbjct: 394 NQF 396
Score = 64 (27.6 bits), Expect = 2.1e-128, Sum P(2) = 2.1e-128
Identities = 24/95 (25%), Positives = 44/95 (46%)
Query: 319 PLHQGG--EGDENFGMHPVSSSYDDKNAMKSMFSQELSFCEKVKDKLRDDYQEFLRCLHL 376
P+H G E +E G VS +A+ + +E+ E +D+ R+ Y FL +
Sbjct: 31 PVHGSGDTEEEEEGGSRRVSQKLTTNDALS--YLREVK--EMFQDQ-REKYDRFLEVMKD 85
Query: 377 YTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLAR 411
+ + + + V +L + +L+ GFN FL +
Sbjct: 86 FKAQRTDTGGVIARVKELFKGHNNLIYGFNTFLPK 120
Score = 47 (21.6 bits), Expect = 1.3e-126, Sum P(2) = 1.3e-126
Identities = 18/68 (26%), Positives = 28/68 (41%)
Query: 48 ALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTF 107
A + + VKD + + Y FL+ + F I + V +L DL+ FN F
Sbjct: 338 AFVFCEKVKDRLCSQ-DDYQTFLKCLNIFSNGIIQRKDLQNLVSDLLGKFPDLMDEFNQF 396
Query: 108 LPKGYEIT 115
+ IT
Sbjct: 397 FERCESIT 404
Score = 43 (20.2 bits), Expect = 2.1e-77, Sum P(3) = 2.1e-77
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 544 SGSEDYSFKHMRKNQYEESLFRCE 567
SGS +S K K+ Y+++ CE
Sbjct: 320 SGSASHSEKDNLKSMYKQAFVFCE 343
>TAIR|locus:2147845 [details] [associations]
symbol:SNL2 "AT5G15020" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0005829
"cytosol" evidence=IDA] [GO:0010048 "vernalization response"
evidence=RCA] [GO:0043481 "anthocyanin accumulation in tissues in
response to UV light" evidence=RCA] [GO:0048440 "carpel
development" evidence=RCA] InterPro:IPR003822 Pfam:PF02671
PROSITE:PS51477 GO:GO:0005829 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006355 GO:GO:0006351 EMBL:AL391146
Gene3D:1.20.1160.11 SUPFAM:SSF47762 eggNOG:COG5602 KO:K11644
InterPro:IPR013194 Pfam:PF08295 SMART:SM00761 HSSP:Q62141
HOGENOM:HOG000030343 ProtClustDB:CLSN2681550 EMBL:AK118953
IPI:IPI00531017 PIR:T51447 RefSeq:NP_197006.2 UniGene:At.43354
ProteinModelPortal:Q9LFQ3 SMR:Q9LFQ3 STRING:Q9LFQ3 PaxDb:Q9LFQ3
PRIDE:Q9LFQ3 EnsemblPlants:AT5G15020.1 GeneID:831354
KEGG:ath:AT5G15020 TAIR:At5g15020 InParanoid:Q9LFQ3 OMA:LFRLHRV
PhylomeDB:Q9LFQ3 Genevestigator:Q9LFQ3 Uniprot:Q9LFQ3
Length = 1367
Score = 1116 (397.9 bits), Expect = 1.9e-217, Sum P(3) = 1.9e-217
Identities = 262/574 (45%), Positives = 340/574 (59%)
Query: 477 KDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLN 536
+DV SKDKY+ K IQELDLS+CERCTPSYRLLP +Y IPS R + GA VLN
Sbjct: 435 RDVEAAKEKERSKDKYMGKSIQELDLSDCERCTPSYRLLPPDYPIPSVRHRQKSGAAVLN 494
Query: 537 DHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINN 596
DHWVSVTSGSEDYSFKHMR+NQYEESLFRCEDDRFELDMLLESV K EELL I +
Sbjct: 495 DHWVSVTSGSEDYSFKHMRRNQYEESLFRCEDDRFELDMLLESVGSAAKSAEELLNIIID 554
Query: 597 NTIKTDGPIRVEDHFTALNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEW 656
I +G R+EDHFTALNLRCIERLYGDHGLDV D++RKN + ALPVILTRLKQKQ+EW
Sbjct: 555 KKISFEGSFRIEDHFTALNLRCIERLYGDHGLDVTDLIRKNPAAALPVILTRLKQKQDEW 614
Query: 657 ARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAXXXXXXXXXXXXDDV 716
+CR FN VWA++Y+KN++KSLDHRSFYFKQQDSK+L AKAL + DDV
Sbjct: 615 TKCREGFNVVWADVYAKNHYKSLDHRSFYFKQQDSKNLSAKALVSEVKDLKEKSQKEDDV 674
Query: 717 LLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLIKYSCGEMCTT-EQLDKVMKIWTTFLEP 775
+L+I+AG R+ I+PHLE++Y D IHEDL++L+++SC E+C+T EQ KV+K+W FLE
Sbjct: 675 VLSISAGYRQPIIPHLEYDYLDRAIHEDLFKLVQFSCEEICSTKEQTGKVLKLWANFLEL 734
Query: 776 MLGVPSRPQGAEDTEDVVKAKSHTVKSRXXXXXXXXXXXXXXXXXMTSKHSNPSRNGDES 835
ML V R +G++ EDVV+ + H + S+ + NGD
Sbjct: 735 MLDVAPRAKGSDSVEDVVETQ-HQ-----RAFTSGEANESSDAISLVSRQLKFATNGDVH 788
Query: 836 IPPEQSSSSRAWLPNGDHGIKEDVSVEADHNARKSDNFC-DSSEQDK-VQNNAAM--ADE 891
S L N D KE++ + D A K C + ++D+ + N AA D
Sbjct: 789 ASSGVSKHGETGLLNRDSSGKENLK-DGDL-ANKDVATCAEKPQKDQEIGNGAAKRSGDV 846
Query: 892 TSGISKQASTNERLIGTNXXXXXXXDQSNGRSNIENTSGL-----SVAHSRP---GNHIV 943
++ +S+ + N D S R + S S+ H++ G IV
Sbjct: 847 DERVATSSSSFPSGVENNNGKVGSRDSSGSRGILSKPSEAIDKVDSIQHTQGVDIGRIIV 906
Query: 944 EG-GLELRSS--NEILPSSEG--------GECSRQNISTNGVMTEGAKILRYNAESVKQF 992
G GL+ +S N S G GE S S + + + L+ A++ +
Sbjct: 907 LGNGLQSDTSKANSNYDESGGPSKIEKEEGELSPVGDSEDNFVVYEDRELKATAKT--EH 964
Query: 993 KIEREEGELSPNGDFEE-DNFAVYGE--SGLEAV 1023
+E E GE + D E+ D+ + GE SG E++
Sbjct: 965 SVEAE-GENDEDADDEDGDDASEAGEDASGTESI 997
Score = 740 (265.6 bits), Expect = 1.9e-217, Sum P(3) = 1.9e-217
Identities = 156/267 (58%), Positives = 192/267 (71%)
Query: 1 MKRSRDEVYMN-SQIKRPMISSRGEPSGQTQVVXXXXXXXA----QKLTTNDALAYLKAV 55
MKR RD++Y SQ KRP+ SSRGE Q+ + QKLTT+DAL YLK V
Sbjct: 1 MKRIRDDIYATGSQFKRPLGSSRGESYEQSPITGGGSIGEGGINTQKLTTDDALTYLKEV 60
Query: 56 KDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEIT 115
K++FQD+R+KYD FLEVMKDFKAQ+ DT+GVI+RVKELFKGH +LI GFNTFLPKG+EIT
Sbjct: 61 KEMFQDQRDKYDMFLEVMKDFKAQKTDTSGVISRVKELFKGHNNLIFGFNTFLPKGFEIT 120
Query: 116 LPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQE 175
L +D + P KK VEFEEAI+FVNKIKTRFQ ++ VYKSFL+ILNMYRK+NK ITEVY E
Sbjct: 121 L--DDVEAPSKKTVEFEEAISFVNKIKTRFQHNELVYKSFLEILNMYRKDNKDITEVYNE 178
Query: 176 VEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQVHVDK---K 232
V LF+DH DLLEEFT FLPDS + + + DR S P R++ ++K +
Sbjct: 179 VSTLFEDHSDLLEEFTRFLPDSLAPHTEAQLLRSQAQRYDDRGSGPPLVRRMFMEKDRRR 238
Query: 233 ERAMASHADRDLSVDRPDPDHDRVLLK 259
ER +AS DRD SVDR D + D+ ++K
Sbjct: 239 ERTVASRGDRDHSVDRSDLNDDKSMVK 265
Score = 284 (105.0 bits), Expect = 1.9e-217, Sum P(3) = 1.9e-217
Identities = 66/144 (45%), Positives = 94/144 (65%)
Query: 298 SMQRFPHKRKSARKIEDSTAEPLHQGGEGDENFGMHPVSSSYDDKNAMKSMFSQELSFCE 357
++Q F KRKS+R++E A + G P S S +KN +KSM++Q FCE
Sbjct: 295 NLQHFSEKRKSSRRMEGFEA---YSG----------PASHS--EKNNLKSMYNQAFLFCE 339
Query: 358 KVKDKL--RDDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLARCEKS 415
KVK++L +DDYQ FL+CL++++ II R +LQ+LV D+LG++PDLMD FN F RCE
Sbjct: 340 KVKERLCSQDDYQAFLKCLNMFSNGIIQRKDLQNLVSDVLGKFPDLMDEFNQFFERCESI 399
Query: 416 E--ELLADVMSKKSLWNEGRIPKS 437
+ + LA VMSKKSL +E + +S
Sbjct: 400 DGFQHLAGVMSKKSLGSEENLSRS 423
Score = 126 (49.4 bits), Expect = 5.5e-110, Sum P(3) = 5.5e-110
Identities = 39/136 (28%), Positives = 67/136 (49%)
Query: 893 SGISKQAS-TNERLIGTNXXXXXXXDQSNGRSNIENTSGLSVAHSRPGNHIVEGGLELRS 951
+G +K++ +ER+ ++ + +NG+ ++SG S+P I
Sbjct: 837 NGAAKRSGDVDERVATSSSSFPSGVENNNGKVGSRDSSGSRGILSKPSEAI--------D 888
Query: 952 SNEILPSSEGGECSRQNISTNGVMTEGAKILRYNAESVKQFKIEREEGELSPNGDFEEDN 1011
+ + ++G + R + NG+ ++ +K ES KIE+EEGELSP GD EDN
Sbjct: 889 KVDSIQHTQGVDIGRIIVLGNGLQSDTSKANSNYDESGGPSKIEKEEGELSPVGD-SEDN 947
Query: 1012 FAVYGESGLEAVHKAK 1027
F VY + L+A K +
Sbjct: 948 FVVYEDRELKATAKTE 963
Score = 83 (34.3 bits), Expect = 9.5e-120, Sum P(2) = 9.5e-120
Identities = 28/107 (26%), Positives = 48/107 (44%)
Query: 131 FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRK---ENKSITEVYQEVEALFQDHPDLL 187
+ +A F K+K R D Y++FL LNM+ + K + + +V F PDL+
Sbjct: 331 YNQAFLFCEKVKERLCSQDD-YQAFLKCLNMFSNGIIQRKDLQNLVSDVLGKF---PDLM 386
Query: 188 EEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQVHVDKKER 234
+EF F ++ +G S + S +R V ++K+R
Sbjct: 387 DEFNQFFERCESIDGFQHL-AGVMS-KKSLGSEENLSRSVKGEEKDR 431
Score = 81 (33.6 bits), Expect = 1.5e-119, Sum P(2) = 1.5e-119
Identities = 19/64 (29%), Positives = 35/64 (54%)
Query: 349 FSQELSFCEKVKDKLRDD---YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGF 405
F + +SF K+K + + + Y+ FL L++Y K+ +E+ + V L + DL++ F
Sbjct: 134 FEEAISFVNKIKTRFQHNELVYKSFLEILNMYRKDNKDITEVYNEVSTLFEDHSDLLEEF 193
Query: 406 NGFL 409
FL
Sbjct: 194 TRFL 197
Score = 66 (28.3 bits), Expect = 5.9e-118, Sum P(2) = 5.9e-118
Identities = 27/91 (29%), Positives = 43/91 (47%)
Query: 343 NAMKSMFSQELSFCEKVKDKL---RDDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYP 399
N K L++ ++VK+ RD Y FL + + + S + S V +L +
Sbjct: 44 NTQKLTTDDALTYLKEVKEMFQDQRDKYDMFLEVMKDFKAQKTDTSGVISRVKELFKGHN 103
Query: 400 DLMDGFNGFLARCEKSEELLADVM--SKKSL 428
+L+ GFN FL + E L DV SKK++
Sbjct: 104 NLIFGFNTFLPK--GFEITLDDVEAPSKKTV 132
Score = 40 (19.1 bits), Expect = 2.4e-84, Sum P(3) = 2.4e-84
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 544 SGSEDYSFKHMRKNQYEESLFRCE 567
SG +S K+ K+ Y ++ CE
Sbjct: 316 SGPASHSEKNNLKSMYNQAFLFCE 339
>ZFIN|ZDB-GENE-070620-3 [details] [associations]
symbol:sin3aa "SIN3 homolog A, transcription
regulator (yeast) a" species:7955 "Danio rerio" [GO:0005634
"nucleus" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR003822 Pfam:PF02671 PROSITE:PS51477
ZFIN:ZDB-GENE-070620-3 GO:GO:0005634 GO:GO:0006355
Gene3D:1.20.1160.11 SUPFAM:SSF47762 eggNOG:COG5602 KO:K11644
InterPro:IPR013194 Pfam:PF08295 SMART:SM00761 HOVERGEN:HBG060425
OMA:PNQNGCQ OrthoDB:EOG48KR9G GeneTree:ENSGT00390000007239
HOGENOM:HOG000230688 EMBL:CU207224 EMBL:BC139856 IPI:IPI00484779
RefSeq:NP_001091650.1 UniGene:Dr.79679 SMR:A5D6S0 STRING:A5D6S0
Ensembl:ENSDART00000083539 GeneID:563090 KEGG:dre:563090 CTD:563090
NextBio:20884735 Uniprot:A5D6S0
Length = 1276
Score = 473 (171.6 bits), Expect = 4.4e-86, Sum P(4) = 4.4e-86
Identities = 113/307 (36%), Positives = 172/307 (56%)
Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQ 558
E+D ++C+R SYR LPK+Y +P + RT + EVLND WVS S SED +F +K Q
Sbjct: 548 EIDYASCKRLGSSYRALPKSYQLPKCTGRTAICKEVLNDTWVSFPSWSEDSTFVSSKKTQ 607
Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEK-INNNTIKTDGPIRVEDH---FTAL 614
YEE ++RCED+RFELD++LE+ N+ T RV E +K ++ + + R+++ F+ +
Sbjct: 608 YEEHMYRCEDERFELDVVLET-NLATIRVLETTQKKLSRMSAEEQAKFRLDNTLGGFSEI 666
Query: 615 -NLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSK 673
+ + I+R+YGD D++D L+KN + ++P++L RLK K+EEW + FNK+W E K
Sbjct: 667 IHRKAIQRIYGDKAPDIIDGLKKNPAASVPIVLKRLKLKEEEWREAQRGFNKIWREQNEK 726
Query: 674 NYHKSLDHRSFYFKQQDSKSLGAKALSAXXXXXXXXXXXXDDVLLAIAAGNRRSIV--PH 731
Y KSLDH+ FKQ D+K L +K L D+ ++ N + PH
Sbjct: 727 YYLKSLDHQGINFKQNDTKVLRSKTL------LNEIESIFDERQEQVSEDNSSTTASSPH 780
Query: 732 LEFEYSDPDIHEDLYQLIKYSCGEMCTTEQLDK--VMKIWTTFLEPML----GVPSRPQG 785
L Y D I ED LI + + + DK + +I F+ ML GV S +
Sbjct: 781 LTLTYEDHQILEDAAALIIHHVKRQSSINKEDKYKIKQIVYHFIPDMLFAQRGVLSDVEE 840
Query: 786 AEDTEDV 792
++ ED+
Sbjct: 841 EDEEEDM 847
Score = 241 (89.9 bits), Expect = 4.4e-86, Sum P(4) = 4.4e-86
Identities = 46/80 (57%), Positives = 61/80 (76%)
Query: 41 QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDL 100
Q+L DAL+YL VK F ++ + Y+DFL++MK+FK+Q IDT GVI+RV +LFKGH DL
Sbjct: 119 QRLKVEDALSYLDQVKLQFGNQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDL 178
Query: 101 ILGFNTFLPKGYEITLPLED 120
I+GFNTFLP GY+I + D
Sbjct: 179 IMGFNTFLPPGYKIEVQTND 198
Score = 200 (75.5 bits), Expect = 4.4e-86, Sum P(4) = 4.4e-86
Identities = 51/134 (38%), Positives = 76/134 (56%)
Query: 114 ITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKS----- 168
I PL++ QP VEF AIN+VNKIK RFQG ++YKSFL+IL+ Y+KE ++
Sbjct: 295 IAPPLQNNQP-----VEFNHAINYVNKIKNRFQGQPNIYKSFLEILHKYQKEQRNAKEAG 349
Query: 169 ------ITE--VYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSA 220
+TE VY EV LF++ DLL EF FLPD++ + + + +R+
Sbjct: 350 GSYTPVLTEQEVYAEVAQLFKNQEDLLSEFGQFLPDANSTMLLGKTTAEKAESVRNDHGG 409
Query: 221 MPTARQVHVDKKER 234
T ++ ++ K+R
Sbjct: 410 --TVKKPQLNNKQR 421
Score = 129 (50.5 bits), Expect = 4.4e-86, Sum P(4) = 4.4e-86
Identities = 30/66 (45%), Positives = 40/66 (60%)
Query: 352 ELSFCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFL 409
E F EKV+ LR + Y FLRCL ++ +EII+R+EL LV LG++P+L F FL
Sbjct: 466 ESLFFEKVRKVLRSAEAYDNFLRCLVIFNEEIISRAELVQLVVPFLGKFPELFTWFKNFL 525
Query: 410 ARCEKS 415
E S
Sbjct: 526 GYKEMS 531
Score = 124 (48.7 bits), Expect = 1.6e-57, Sum P(3) = 1.6e-57
Identities = 22/67 (32%), Positives = 40/67 (59%)
Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
++ E+A+++++++K +F VY FLDI+ ++ ++ V V LF+ HPDL+
Sbjct: 121 LKVEDALSYLDQVKLQFGNQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIM 180
Query: 189 EFTHFLP 195
F FLP
Sbjct: 181 GFNTFLP 187
Score = 88 (36.0 bits), Expect = 9.5e-54, Sum P(3) = 9.5e-54
Identities = 28/82 (34%), Positives = 39/82 (47%)
Query: 41 QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDF-KAQR-IDTAG-----------VI 87
Q + N A+ Y+ +K+ FQ + Y FLE++ + K QR AG V
Sbjct: 303 QPVEFNHAINYVNKIKNRFQGQPNIYKSFLEILHKYQKEQRNAKEAGGSYTPVLTEQEVY 362
Query: 88 ARVKELFKGHRDLILGFNTFLP 109
A V +LFK DL+ F FLP
Sbjct: 363 AEVAQLFKNQEDLLSEFGQFLP 384
Score = 74 (31.1 bits), Expect = 1.3e-43, Sum P(2) = 1.3e-43
Identities = 24/94 (25%), Positives = 43/94 (45%)
Query: 334 PVSSSYDDKNAMKSMFSQELSFCEKVKDKLRDD---YQEFLRCLHLYTKEIITRSELQSL 390
P +S+ + + LS+ ++VK + + Y +FL + + + I + S
Sbjct: 108 PSASTQGQQQFQRLKVEDALSYLDQVKLQFGNQPQVYNDFLDIMKEFKSQSIDTPGVISR 167
Query: 391 VGDLLGRYPDLMDGFNGFLARCEKSEELLADVMS 424
V L +PDL+ GFN FL K E D+++
Sbjct: 168 VSQLFKGHPDLIMGFNTFLPPGYKIEVQTNDLVN 201
Score = 68 (29.0 bits), Expect = 2.3e-63, Sum P(3) = 2.3e-63
Identities = 24/95 (25%), Positives = 41/95 (43%)
Query: 349 FSQELSFCEKVKDKLRDD---YQEFLRCLHLYTKE-------------IITRSELQSLVG 392
F+ +++ K+K++ + Y+ FL LH Y KE ++T E+ + V
Sbjct: 307 FNHAINYVNKIKNRFQGQPNIYKSFLEILHKYQKEQRNAKEAGGSYTPVLTEQEVYAEVA 366
Query: 393 DLLGRYPDLMDGFNGFLARCEKSEELLADVMSKKS 427
L DL+ F FL S LL ++K+
Sbjct: 367 QLFKNQEDLLSEFGQFLPDAN-STMLLGKTTAEKA 400
Score = 53 (23.7 bits), Expect = 2.1e-41, Sum P(2) = 2.1e-41
Identities = 18/69 (26%), Positives = 30/69 (43%)
Query: 51 YLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPK 110
+ + V+ + + E YD+FL + F + I A ++ V +L F FL
Sbjct: 469 FFEKVRKVLRSA-EAYDNFLRCLVIFNEEIISRAELVQLVVPFLGKFPELFTWFKNFL-- 525
Query: 111 GYEITLPLE 119
GY+ LE
Sbjct: 526 GYKEMSHLE 534
Score = 52 (23.4 bits), Expect = 1.1e-61, Sum P(3) = 1.1e-61
Identities = 16/58 (27%), Positives = 27/58 (46%)
Query: 137 FVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFL 194
F K++ + + Y +FL L ++ +E S E+ Q V P+L F +FL
Sbjct: 469 FFEKVRKVLRSAE-AYDNFLRCLVIFNEEIISRAELVQLVVPFLGKFPELFTWFKNFL 525
Score = 49 (22.3 bits), Expect = 9.8e-31, Sum P(4) = 9.8e-31
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 380 EIITRSELQSLVGDLLGRYPDLMDG 404
EII R +Q + GD + PD++DG
Sbjct: 665 EIIHRKAIQRIYGD---KAPDIIDG 686
Score = 39 (18.8 bits), Expect = 5.8e-39, Sum P(4) = 5.8e-39
Identities = 11/41 (26%), Positives = 20/41 (48%)
Query: 841 SSSSRAWLPNGDHGIKEDVSVEADHNARKSDNFCDSSEQDK 881
+SS L DH I ED + H+ ++ + +++DK
Sbjct: 776 ASSPHLTLTYEDHQILEDAAALIIHHVKRQSSI---NKEDK 813
Score = 39 (18.8 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 10/23 (43%), Positives = 11/23 (47%)
Query: 828 PSRNGDESIPPEQSSSSRAWLPN 850
PS + SIPP S S PN
Sbjct: 265 PSSQPNPSIPPYASPRSPPLQPN 287
Score = 37 (18.1 bits), Expect = 9.3e-39, Sum P(4) = 9.3e-39
Identities = 13/42 (30%), Positives = 22/42 (52%)
Query: 567 EDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVE 608
+++ F+L L NV + ELL+ N+ DGP+ +E
Sbjct: 1067 DENCFKLMFLKSRGNV--QLTVELLDTEEENS---DGPMEIE 1103
>UNIPROTKB|F1SJ69 [details] [associations]
symbol:SIN3A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071333 "cellular response to glucose stimulus"
evidence=IEA] [GO:0051595 "response to methylglyoxal" evidence=IEA]
[GO:0051329 "interphase of mitotic cell cycle" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0034613 "cellular protein localization"
evidence=IEA] [GO:0017053 "transcriptional repressor complex"
evidence=IEA] [GO:0016580 "Sin3 complex" evidence=IEA] [GO:0006260
"DNA replication" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0001106 "RNA polymerase II transcription corepressor activity"
evidence=IEA] [GO:0001103 "RNA polymerase II repressing
transcription factor binding" evidence=IEA] [GO:0000776
"kinetochore" evidence=IEA] InterPro:IPR003822 Pfam:PF02671
PROSITE:PS51477 GO:GO:0017053 GO:GO:0043066 GO:GO:0000776
GO:GO:0034613 GO:GO:0071333 GO:GO:0003677 GO:GO:0006260
GO:GO:0001701 GO:GO:0003700 GO:GO:0003682 GO:GO:0005667
GO:GO:0051595 GO:GO:0001106 GO:GO:0016580 Gene3D:1.20.1160.11
SUPFAM:SSF47762 GO:GO:0051329 InterPro:IPR013194 Pfam:PF08295
SMART:SM00761 OMA:PNQNGCQ GeneTree:ENSGT00390000007239
EMBL:CU467588 Ensembl:ENSSSCT00000002105 Uniprot:F1SJ69
Length = 1227
Score = 473 (171.6 bits), Expect = 1.4e-85, Sum P(4) = 1.4e-85
Identities = 109/287 (37%), Positives = 162/287 (56%)
Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQ 558
E+D ++C+R SYR LPK+Y P + RT L EVLND WVS S SED +F +K Q
Sbjct: 499 EIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVSSKKTQ 558
Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEK-INNNTIKTDGPIRVEDHF--TA-- 613
YEE ++RCED+RFELD++LE+ N+ T RV E ++K ++ + + R+++ T+
Sbjct: 559 YEEHIYRCEDERFELDVVLET-NLATIRVLEAIQKKLSRLSAEEQAKFRLDNTLGGTSEV 617
Query: 614 LNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSK 673
++ + ++R+Y D D++D LRKN S+A+P++L RLK K+EEW + FNKVW E K
Sbjct: 618 IHRKALQRIYADKAADIIDGLRKNPSIAVPIVLKRLKMKEEEWREAQRGFNKVWREQNEK 677
Query: 674 NYHKSLDHRSFYFKQQDSKSLGAKAL-SAXXXXXXXXXXXXDDVLLAIAAGNRRSIVPHL 732
Y KSLDH+ FKQ D+K L +K+L + + + G PHL
Sbjct: 678 YYLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQATEENAGVPVG------PHL 731
Query: 733 EFEYSDPDIHEDLYQLIKYSCGEMCTTEQLDK--VMKIWTTFLEPML 777
Y D I ED LI + ++ DK + +I F+ +L
Sbjct: 732 SLAYEDKQILEDAAALIIHHVKRQTGIQKEDKYKIKQIMHHFIPDLL 778
Score = 240 (89.5 bits), Expect = 1.4e-85, Sum P(4) = 1.4e-85
Identities = 46/80 (57%), Positives = 60/80 (75%)
Query: 41 QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDL 100
Q+L DAL+YL VK F + + Y+DFL++MK+FK+Q IDT GVI+RV +LFKGH DL
Sbjct: 72 QRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDL 131
Query: 101 ILGFNTFLPKGYEITLPLED 120
I+GFNTFLP GY+I + D
Sbjct: 132 IMGFNTFLPPGYKIEVQTND 151
Score = 191 (72.3 bits), Expect = 1.4e-85, Sum P(4) = 1.4e-85
Identities = 46/123 (37%), Positives = 70/123 (56%)
Query: 114 ITLPLEDEQP-PPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKS---- 168
+T+ L P +PVEF AIN+VNKIK RFQG +YK+FL+IL+ Y+KE ++
Sbjct: 239 VTISLGTAPPLQNNQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEA 298
Query: 169 -------ITE--VYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGR-NSILRDRS 218
+TE VY +V LF++ DLL EF FLPD++ + + + + +S+ D
Sbjct: 299 GGNYTPALTEQEVYAQVARLFKNQEDLLSEFGQFLPDANSSVLLSKTTAEKVDSVRNDHG 358
Query: 219 SAM 221
+
Sbjct: 359 GTV 361
Score = 133 (51.9 bits), Expect = 1.4e-85, Sum P(4) = 1.4e-85
Identities = 28/69 (40%), Positives = 43/69 (62%)
Query: 343 NAMKSMFSQELSFCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPD 400
+A K E F +KV+ LR + Y+ FLRCL ++ +E+I+R+EL LV LG++P+
Sbjct: 408 DASKHGVGTESLFFDKVRKALRSTEAYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPE 467
Query: 401 LMDGFNGFL 409
L + F FL
Sbjct: 468 LFNWFKNFL 476
Score = 125 (49.1 bits), Expect = 3.9e-58, Sum P(3) = 3.9e-58
Identities = 25/79 (31%), Positives = 45/79 (56%)
Query: 117 PLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEV 176
P++ +Q + VE +A+++++++K +F VY FLDI+ ++ ++ V V
Sbjct: 64 PVQGQQQFQRLKVE--DALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRV 121
Query: 177 EALFQDHPDLLEEFTHFLP 195
LF+ HPDL+ F FLP
Sbjct: 122 SQLFKGHPDLIMGFNTFLP 140
Score = 87 (35.7 bits), Expect = 3.6e-54, Sum P(3) = 3.6e-54
Identities = 28/82 (34%), Positives = 40/82 (48%)
Query: 41 QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDF-KAQR-IDTAG-----------VI 87
Q + N A+ Y+ +K+ FQ + + Y FLE++ + K QR AG V
Sbjct: 253 QPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVY 312
Query: 88 ARVKELFKGHRDLILGFNTFLP 109
A+V LFK DL+ F FLP
Sbjct: 313 AQVARLFKNQEDLLSEFGQFLP 334
Score = 72 (30.4 bits), Expect = 1.8e-43, Sum P(2) = 1.8e-43
Identities = 26/105 (24%), Positives = 45/105 (42%)
Query: 334 PVSSSYDDKNAMKSMFSQELSFCEKVKDKLRDD---YQEFLRCLHLYTKEIITRSELQSL 390
PV+ + + LS+ ++VK + Y +FL + + + I + S
Sbjct: 61 PVAPVQGQQQFQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISR 120
Query: 391 VGDLLGRYPDLMDGFNGFLARCEKSEELLADVMSKKSLWNEGRIP 435
V L +PDL+ GFN FL K E D+++ + +IP
Sbjct: 121 VSQLFKGHPDLIMGFNTFLPPGYKIEVQTNDMVNVTTPGQVHQIP 165
Score = 68 (29.0 bits), Expect = 2.3e-63, Sum P(3) = 2.3e-63
Identities = 25/94 (26%), Positives = 41/94 (43%)
Query: 349 FSQELSFCEKVKDKLR---DDYQEFLRCLHLYTKE-------------IITRSELQSLVG 392
F+ +++ K+K++ + D Y+ FL LH Y KE +T E+ + V
Sbjct: 257 FNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVYAQVA 316
Query: 393 DLLGRYPDLMDGFNGFLARCEKSEELLADVMSKK 426
L DL+ F FL S LL+ ++K
Sbjct: 317 RLFKNQEDLLSEFGQFLPDANSSV-LLSKTTAEK 349
Score = 61 (26.5 bits), Expect = 1.2e-62, Sum P(3) = 1.2e-62
Identities = 16/58 (27%), Positives = 29/58 (50%)
Query: 137 FVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFL 194
F +K++ + + Y++FL L ++ +E S E+ Q V P+L F +FL
Sbjct: 420 FFDKVRKALRSTE-AYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPELFNWFKNFL 476
Score = 52 (23.4 bits), Expect = 2.3e-41, Sum P(2) = 2.3e-41
Identities = 16/56 (28%), Positives = 26/56 (46%)
Query: 64 EKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLE 119
E Y++FL + F + I A ++ V +L F FL GY+ ++ LE
Sbjct: 432 EAYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPELFNWFKNFL--GYKESVHLE 485
Score = 41 (19.5 bits), Expect = 1.3e-29, Sum P(3) = 1.3e-29
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 378 TKEIITRSELQSLVGDLLGRYPDLMDG 404
T E+I R LQ + D + D++DG
Sbjct: 614 TSEVIHRKALQRIYAD---KAADIIDG 637
Score = 37 (18.1 bits), Expect = 3.3e-29, Sum P(3) = 3.3e-29
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 399 PDLMDGFNGFLARCEKSEELLADV 422
PDL+ G L+ E+ EE DV
Sbjct: 775 PDLLFAQRGDLSDVEEEEEEEMDV 798
>UNIPROTKB|F1MTR3 [details] [associations]
symbol:SIN3A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071333 "cellular response to glucose stimulus"
evidence=IEA] [GO:0051595 "response to methylglyoxal" evidence=IEA]
[GO:0051329 "interphase of mitotic cell cycle" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0034613 "cellular protein localization"
evidence=IEA] [GO:0017053 "transcriptional repressor complex"
evidence=IEA] [GO:0016580 "Sin3 complex" evidence=IEA] [GO:0006260
"DNA replication" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0001106 "RNA polymerase II transcription corepressor activity"
evidence=IEA] [GO:0001103 "RNA polymerase II repressing
transcription factor binding" evidence=IEA] [GO:0000776
"kinetochore" evidence=IEA] InterPro:IPR003822 Pfam:PF02671
PROSITE:PS51477 GO:GO:0017053 GO:GO:0043066 GO:GO:0000776
GO:GO:0034613 GO:GO:0071333 GO:GO:0003677 GO:GO:0006260
GO:GO:0001701 GO:GO:0003700 GO:GO:0003682 GO:GO:0005667
GO:GO:0051595 GO:GO:0001106 GO:GO:0016580 Gene3D:1.20.1160.11
SUPFAM:SSF47762 GO:GO:0051329 KO:K11644 InterPro:IPR013194
Pfam:PF08295 SMART:SM00761 CTD:25942 OMA:PNQNGCQ
GeneTree:ENSGT00390000007239 EMBL:DAAA02052491 IPI:IPI01028188
RefSeq:XP_002696677.1 RefSeq:XP_003583795.1 RefSeq:XP_003587608.1
RefSeq:XP_880544.4 Ensembl:ENSBTAT00000013167 GeneID:518504
KEGG:bta:518504 NextBio:20872670 Uniprot:F1MTR3
Length = 1274
Score = 473 (171.6 bits), Expect = 1.8e-85, Sum P(4) = 1.8e-85
Identities = 109/287 (37%), Positives = 162/287 (56%)
Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQ 558
E+D ++C+R SYR LPK+Y P + RT L EVLND WVS S SED +F +K Q
Sbjct: 546 EIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVSSKKTQ 605
Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEK-INNNTIKTDGPIRVEDHF--TA-- 613
YEE ++RCED+RFELD++LE+ N+ T RV E ++K ++ + + R+++ T+
Sbjct: 606 YEEHIYRCEDERFELDVVLET-NLATIRVLEAIQKKLSRLSAEEQAKFRLDNTLGGTSEV 664
Query: 614 LNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSK 673
++ + ++R+Y D D++D LRKN S+A+P++L RLK K+EEW + FNKVW E K
Sbjct: 665 IHRKALQRIYADKAADIIDGLRKNPSIAVPIVLKRLKMKEEEWREAQRGFNKVWREQNEK 724
Query: 674 NYHKSLDHRSFYFKQQDSKSLGAKAL-SAXXXXXXXXXXXXDDVLLAIAAGNRRSIVPHL 732
Y KSLDH+ FKQ D+K L +K+L + + + G PHL
Sbjct: 725 YYLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQATEENAGVPVG------PHL 778
Query: 733 EFEYSDPDIHEDLYQLIKYSCGEMCTTEQLDK--VMKIWTTFLEPML 777
Y D I ED LI + ++ DK + +I F+ +L
Sbjct: 779 SLAYEDKQILEDAAALIIHHVKRQTGIQKEDKYKIKQIMHHFIPDLL 825
Score = 240 (89.5 bits), Expect = 1.8e-85, Sum P(4) = 1.8e-85
Identities = 46/80 (57%), Positives = 60/80 (75%)
Query: 41 QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDL 100
Q+L DAL+YL VK F + + Y+DFL++MK+FK+Q IDT GVI+RV +LFKGH DL
Sbjct: 119 QRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDL 178
Query: 101 ILGFNTFLPKGYEITLPLED 120
I+GFNTFLP GY+I + D
Sbjct: 179 IMGFNTFLPPGYKIEVQTND 198
Score = 191 (72.3 bits), Expect = 1.8e-85, Sum P(4) = 1.8e-85
Identities = 46/123 (37%), Positives = 70/123 (56%)
Query: 114 ITLPLEDEQP-PPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKS---- 168
+T+ L P +PVEF AIN+VNKIK RFQG +YK+FL+IL+ Y+KE ++
Sbjct: 286 VTISLGTAPPLQNNQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEA 345
Query: 169 -------ITE--VYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGR-NSILRDRS 218
+TE VY +V LF++ DLL EF FLPD++ + + + + +S+ D
Sbjct: 346 GGNYTPALTEQEVYAQVARLFKNQEDLLSEFGQFLPDANSSVLLSKTTAEKVDSVRNDHG 405
Query: 219 SAM 221
+
Sbjct: 406 GTV 408
Score = 133 (51.9 bits), Expect = 1.8e-85, Sum P(4) = 1.8e-85
Identities = 28/69 (40%), Positives = 43/69 (62%)
Query: 343 NAMKSMFSQELSFCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPD 400
+A K E F +KV+ LR + Y+ FLRCL ++ +E+I+R+EL LV LG++P+
Sbjct: 455 DASKHGVGTESLFFDKVRKALRSAEAYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPE 514
Query: 401 LMDGFNGFL 409
L + F FL
Sbjct: 515 LFNWFKNFL 523
Score = 125 (49.1 bits), Expect = 4.9e-58, Sum P(3) = 4.9e-58
Identities = 25/79 (31%), Positives = 45/79 (56%)
Query: 117 PLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEV 176
P++ +Q + VE +A+++++++K +F VY FLDI+ ++ ++ V V
Sbjct: 111 PVQGQQQFQRLKVE--DALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRV 168
Query: 177 EALFQDHPDLLEEFTHFLP 195
LF+ HPDL+ F FLP
Sbjct: 169 SQLFKGHPDLIMGFNTFLP 187
Score = 87 (35.7 bits), Expect = 4.6e-54, Sum P(3) = 4.6e-54
Identities = 28/82 (34%), Positives = 40/82 (48%)
Query: 41 QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDF-KAQR-IDTAG-----------VI 87
Q + N A+ Y+ +K+ FQ + + Y FLE++ + K QR AG V
Sbjct: 300 QPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVY 359
Query: 88 ARVKELFKGHRDLILGFNTFLP 109
A+V LFK DL+ F FLP
Sbjct: 360 AQVARLFKNQEDLLSEFGQFLP 381
Score = 72 (30.4 bits), Expect = 2.1e-43, Sum P(2) = 2.1e-43
Identities = 26/105 (24%), Positives = 45/105 (42%)
Query: 334 PVSSSYDDKNAMKSMFSQELSFCEKVKDKLRDD---YQEFLRCLHLYTKEIITRSELQSL 390
PV+ + + LS+ ++VK + Y +FL + + + I + S
Sbjct: 108 PVAPVQGQQQFQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISR 167
Query: 391 VGDLLGRYPDLMDGFNGFLARCEKSEELLADVMSKKSLWNEGRIP 435
V L +PDL+ GFN FL K E D+++ + +IP
Sbjct: 168 VSQLFKGHPDLIMGFNTFLPPGYKIEVQTNDMVNVTTPGQVHQIP 212
Score = 68 (29.0 bits), Expect = 2.9e-63, Sum P(3) = 2.9e-63
Identities = 25/94 (26%), Positives = 41/94 (43%)
Query: 349 FSQELSFCEKVKDKLR---DDYQEFLRCLHLYTKE-------------IITRSELQSLVG 392
F+ +++ K+K++ + D Y+ FL LH Y KE +T E+ + V
Sbjct: 304 FNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVYAQVA 363
Query: 393 DLLGRYPDLMDGFNGFLARCEKSEELLADVMSKK 426
L DL+ F FL S LL+ ++K
Sbjct: 364 RLFKNQEDLLSEFGQFLPDANSSV-LLSKTTAEK 396
Score = 60 (26.2 bits), Expect = 2.0e-62, Sum P(3) = 2.0e-62
Identities = 16/58 (27%), Positives = 29/58 (50%)
Query: 137 FVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFL 194
F +K++ + + Y++FL L ++ +E S E+ Q V P+L F +FL
Sbjct: 467 FFDKVRKALRSAE-AYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPELFNWFKNFL 523
Score = 52 (23.4 bits), Expect = 2.6e-41, Sum P(2) = 2.6e-41
Identities = 16/56 (28%), Positives = 26/56 (46%)
Query: 64 EKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLE 119
E Y++FL + F + I A ++ V +L F FL GY+ ++ LE
Sbjct: 479 EAYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPELFNWFKNFL--GYKESVHLE 532
Score = 41 (19.5 bits), Expect = 1.5e-29, Sum P(3) = 1.5e-29
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 378 TKEIITRSELQSLVGDLLGRYPDLMDG 404
T E+I R LQ + D + D++DG
Sbjct: 661 TSEVIHRKALQRIYAD---KAADIIDG 684
Score = 37 (18.1 bits), Expect = 3.8e-29, Sum P(3) = 3.8e-29
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 399 PDLMDGFNGFLARCEKSEELLADV 422
PDL+ G L+ E+ EE DV
Sbjct: 822 PDLLFAQRGDLSDVEEEEEEEMDV 845
>DICTYBASE|DDB_G0281045 [details] [associations]
symbol:DDB_G0281045 "paired amphipathic helix (PAH)
containing protein" species:44689 "Dictyostelium discoideum"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR003822 Pfam:PF02671
PROSITE:PS51477 dictyBase:DDB_G0281045 GO:GO:0005634 GO:GO:0006355
EMBL:AAFI02000040 InterPro:IPR011050 SUPFAM:SSF51126
Gene3D:1.20.1160.11 SUPFAM:SSF47762 eggNOG:COG5602 KO:K11644
InterPro:IPR013194 Pfam:PF08295 SMART:SM00761 RefSeq:XP_640783.1
ProteinModelPortal:Q54UJ3 SMR:Q54UJ3 EnsemblProtists:DDB0216409
GeneID:8622836 KEGG:ddi:DDB_G0281045 InParanoid:Q54UJ3
Uniprot:Q54UJ3
Length = 1934
Score = 506 (183.2 bits), Expect = 3.5e-85, Sum P(5) = 3.5e-85
Identities = 112/282 (39%), Positives = 166/282 (58%)
Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQ 558
E+D + C+R PSYR LPKNY P + R+EL VLND WVS +GSED+ FK RKNQ
Sbjct: 1180 EIDFTTCKRLGPSYRALPKNYPQPRCTGRSELAESVLNDVWVSFPTGSEDFGFKSQRKNQ 1239
Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVE---DHFTALN 615
+EE+LF+CED+RFELD+++E +N +T RV L+ I N+ I R+ + L+
Sbjct: 1240 FEENLFKCEDERFELDLIIE-LNASTIRV---LDPILNSLIDMHDHERLNFRMPNLDVLH 1295
Query: 616 LRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNY 675
R IERLY + G++++ L N ++LPVIL RLKQK +EW + + ++NKVW + KNY
Sbjct: 1296 HRSIERLYNNKGMEIITALYNNPLVSLPVILKRLKQKDQEWRKAKREWNKVWKDTTEKNY 1355
Query: 676 HKSLDHRSFYFKQQDSKSLGAKALSAXXXXXXXXXXXXDDVLLAIAAGNRRSIV--PHLE 733
++SLD++S FKQ D K+L K L A D LL + +++I+ P
Sbjct: 1356 YRSLDYQSTSFKQSDKKTLTPKVLLAEIRQKYSEKIRERDDLLQRRSRIKQTIIKPPPYH 1415
Query: 734 FEYSDPD--IHEDLYQLIKYSCGEMCTTEQLDKVMKIWTTFL 773
Y PD + ++ LI ++ ++ + L+K+ FL
Sbjct: 1416 LLYFMPDYKVCSNISSLILFAAEKIVQKQDLEKIENFLNFFL 1457
Score = 216 (81.1 bits), Expect = 3.5e-85, Sum P(5) = 3.5e-85
Identities = 45/116 (38%), Positives = 67/116 (57%)
Query: 119 EDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEA 178
+ QPP KK E + A N+V KIK RF VY+ FL+IL+ Y E ++I +VY +V
Sbjct: 613 QQNQPPQKKQTELDHARNYVKKIKNRFINQPDVYRHFLEILHNYHNEPQTIKDVYDQVAD 672
Query: 179 LFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQVHVDKKER 234
LF+ HPDLL EFT FLPD+ A+ N++L + M +Q+ ++++
Sbjct: 673 LFRAHPDLLSEFTQFLPDAVNASQ------NPNAVLEQQQQQMLQQQQLQQQQQQQ 722
Score = 190 (71.9 bits), Expect = 3.5e-85, Sum P(5) = 3.5e-85
Identities = 41/85 (48%), Positives = 53/85 (62%)
Query: 41 QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDL 100
Q+ ++A +L+ VK F + Y+ FL++MKD KA IDT VIARV ELFKGH+ L
Sbjct: 411 QQQQFDNAFYFLEQVKMQFSKQPRIYNQFLDIMKDLKAHNIDTPVVIARVIELFKGHKHL 470
Query: 101 ILGFNTFLPKGYEITLPLEDEQPPP 125
I GFNTFLP Y I + D+ P
Sbjct: 471 ISGFNTFLPADYRIDVSTFDDDGKP 495
Score = 132 (51.5 bits), Expect = 3.5e-85, Sum P(5) = 3.5e-85
Identities = 32/72 (44%), Positives = 48/72 (66%)
Query: 351 QELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGD-LLGRYPDLMDGFNG 407
+EL F KV+ + ++ Y EFL+CL+L+++EII+R+EL LV D LL R P L + F
Sbjct: 1092 EELDFFHKVRTGVPNNKLYNEFLKCLNLFSQEIISRTELVLLVKDILLPRLPALFEWFKS 1151
Query: 408 FLARCEKSEELL 419
F+ ++S ELL
Sbjct: 1152 FIGVDDQSIELL 1163
Score = 120 (47.3 bits), Expect = 7.1e-60, Sum P(4) = 7.1e-60
Identities = 25/81 (30%), Positives = 40/81 (49%)
Query: 119 EDEQPPPKKPV----EFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQ 174
+ +QP P+ P+ +F+ A F+ ++K +F +Y FLDI+ + N V
Sbjct: 399 QQQQPAPQSPIRQQQQFDNAFYFLEQVKMQFSKQPRIYNQFLDIMKDLKAHNIDTPVVIA 458
Query: 175 EVEALFQDHPDLLEEFTHFLP 195
V LF+ H L+ F FLP
Sbjct: 459 RVIELFKGHKHLISGFNTFLP 479
Score = 95 (38.5 bits), Expect = 2.8e-57, Sum P(4) = 2.8e-57
Identities = 23/70 (32%), Positives = 39/70 (55%)
Query: 41 QKLTTND-ALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRD 99
+K T D A Y+K +K+ F ++ + Y FLE++ ++ + V +V +LF+ H D
Sbjct: 620 KKQTELDHARNYVKKIKNRFINQPDVYRHFLEILHNYHNEPQTIKDVYDQVADLFRAHPD 679
Query: 100 LILGFNTFLP 109
L+ F FLP
Sbjct: 680 LLSEFTQFLP 689
Score = 84 (34.6 bits), Expect = 3.6e-62, Sum P(4) = 3.6e-62
Identities = 20/59 (33%), Positives = 31/59 (52%)
Query: 354 SFCEKVKDKL---RDDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFL 409
++ +K+K++ D Y+ FL LH Y E T ++ V DL +PDL+ F FL
Sbjct: 630 NYVKKIKNRFINQPDVYRHFLEILHNYHNEPQTIKDVYDQVADLFRAHPDLLSEFTQFL 688
Score = 69 (29.3 bits), Expect = 1.3e-60, Sum P(4) = 1.3e-60
Identities = 20/63 (31%), Positives = 34/63 (53%)
Query: 133 EAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEV-EALFQDHPDLLEEFT 191
E ++F +K++T ++ +Y FL LN++ +E S TE+ V + L P L E F
Sbjct: 1092 EELDFFHKVRTGVP-NNKLYNEFLKCLNLFSQEIISRTELVLLVKDILLPRLPALFEWFK 1150
Query: 192 HFL 194
F+
Sbjct: 1151 SFI 1153
Score = 50 (22.7 bits), Expect = 3.9e-27, Sum P(3) = 3.9e-27
Identities = 13/54 (24%), Positives = 25/54 (46%)
Query: 876 SSEQDKVQNNAAMADETSGISKQASTNERLIGTNXXXXXXXDQSNGRSNIENTS 929
SSE++K + + +D+ + +Q S ++ TN SN +N N +
Sbjct: 988 SSEKEKKKRFSKKSDDKNEYGQQISGGVQMYPTNNNLINSMMNSNANNNNNNNN 1041
Score = 44 (20.5 bits), Expect = 1.5e-42, Sum P(4) = 1.5e-42
Identities = 18/68 (26%), Positives = 29/68 (42%)
Query: 346 KSMFSQELSFCEKVKDKLRDD---YQEFLRCLH-LYTKEIITRSELQSLVGDLLGRYPDL 401
+ F F E+VK + Y +FL + L I T + ++ +L + L
Sbjct: 412 QQQFDNAFYFLEQVKMQFSKQPRIYNQFLDIMKDLKAHNIDTPVVIARVI-ELFKGHKHL 470
Query: 402 MDGFNGFL 409
+ GFN FL
Sbjct: 471 ISGFNTFL 478
Score = 44 (20.5 bits), Expect = 3.7e-35, Sum P(4) = 3.7e-35
Identities = 11/25 (44%), Positives = 13/25 (52%)
Query: 490 DKYLAKPIQELDLSNCERCTPSYRL 514
D+ L I E L C CT +YRL
Sbjct: 1867 DEALKDTINETGLE-CRICTQTYRL 1890
Score = 42 (19.8 bits), Expect = 3.5e-85, Sum P(5) = 3.5e-85
Identities = 12/54 (22%), Positives = 23/54 (42%)
Query: 876 SSEQDKVQNNAAMADETSGISKQASTNERLIGTNXXXXXXXDQSNGRSNIENTS 929
S+ + NN +M ++ +GIS ++ N TN + +N +S
Sbjct: 1592 SANSNTDSNNDSMDEKLNGIS-HSNNNNNNNNTNNTTATTTTTTTTTTNSSESS 1644
Score = 41 (19.5 bits), Expect = 1.1e-51, Sum P(4) = 1.1e-51
Identities = 7/22 (31%), Positives = 15/22 (68%)
Query: 206 VPSGRNSILRDRSSAMPTARQV 227
+PS +N++ D ++ +P R+V
Sbjct: 145 LPSAKNTLNDDNTADLPYGRRV 166
Score = 39 (18.8 bits), Expect = 5.3e-26, Sum P(3) = 5.3e-26
Identities = 13/74 (17%), Positives = 28/74 (37%)
Query: 837 PPEQSSSSRAWLPNGDHGIKE-----DVSVEADHNARKSDNFCDSSEQDKVQNNAAMADE 891
PP + S+A PN + G ++ ++ ++ +Q + Q A +
Sbjct: 806 PPPYAQQSQAGYPNYNQGNQQLTPQQQAQIQQHQEYQQQQQLQQQQQQQQQQQLLAQQQQ 865
Query: 892 TSGISKQASTNERL 905
+QA ++L
Sbjct: 866 QQQQQQQALQQQQL 879
Score = 39 (18.8 bits), Expect = 5.3e-26, Sum P(3) = 5.3e-26
Identities = 14/80 (17%), Positives = 37/80 (46%)
Query: 830 RNGDESIPPEQSSSSRAWLPNGDHGIKEDVSVEADHNARKSDNFCDSSEQDKVQNNAAMA 889
++ D++ +Q S P ++ I ++ A++N ++N +++ + NN M
Sbjct: 1000 KSDDKNEYGQQISGGVQMYPTNNNLINSMMNSNANNNNNNNNNNNNNNNNNN-NNNNIMN 1058
Query: 890 DETSGISKQASTNERLIGTN 909
+ +++Q + N + N
Sbjct: 1059 QQN--MNQQQNMNNMISNNN 1076
Score = 38 (18.4 bits), Expect = 3.0e-42, Sum P(3) = 3.0e-42
Identities = 17/74 (22%), Positives = 30/74 (40%)
Query: 66 YDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILG-FNTFLP-KGYEITLPLEDEQP 123
Y++FL+ + F + I ++ VK++ + F +F+ I L EQ
Sbjct: 1110 YNEFLKCLNLFSQEIISRTELVLLVKDILLPRLPALFEWFKSFIGVDDQSIELLERMEQS 1169
Query: 124 PPKKPVEFEEAINF 137
P K I+F
Sbjct: 1170 SPGKQNNAWSEIDF 1183
>UNIPROTKB|J9P8L1 [details] [associations]
symbol:SIN3A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003822 Pfam:PF02671 PROSITE:PS51477 GO:GO:0005634
GO:GO:0006355 Gene3D:1.20.1160.11 SUPFAM:SSF47762 KO:K11644
InterPro:IPR013194 Pfam:PF08295 SMART:SM00761 CTD:25942 OMA:PNQNGCQ
GeneTree:ENSGT00390000007239 EMBL:AAEX03016328 EMBL:AAEX03016329
RefSeq:XP_535546.4 Ensembl:ENSCAFT00000045591 GeneID:478372
KEGG:cfa:478372 Uniprot:J9P8L1
Length = 1274
Score = 473 (171.6 bits), Expect = 3.8e-85, Sum P(4) = 3.8e-85
Identities = 111/286 (38%), Positives = 162/286 (56%)
Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQ 558
E+D ++C+R SYR LPK+Y P + RT L EVLND WVS S SED +F +K Q
Sbjct: 546 EIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVSSKKTQ 605
Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEK-INNNTIKTDGPIRVEDHF--TA-- 613
YEE ++RCED+RFELD++LE+ N+ T RV E ++K ++ + + R+++ T+
Sbjct: 606 YEEHIYRCEDERFELDVVLET-NLATIRVLEAIQKKLSRLSAEEQAKFRLDNTLGGTSEV 664
Query: 614 LNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSK 673
++ + ++R+Y D D++D LRKN S+A+P++L RLK K+EEW + FNKVW E K
Sbjct: 665 IHRKALQRIYADKAADIIDGLRKNPSIAVPIVLKRLKMKEEEWREAQRGFNKVWREQNEK 724
Query: 674 NYHKSLDHRSFYFKQQDSKSLGAKALSAXXXXXXXXXXXXDDVLLAIAAGNRRSIVPHLE 733
Y KSLDH+ FKQ D+K L +K+L + AG I PHL
Sbjct: 725 YYLKSLDHQGINFKQNDTKVLRSKSL---LNEIESIYDERQEQATEDNAGV--PIGPHLS 779
Query: 734 FEYSDPDIHEDLYQLIKYSCGEMCTTEQLDK--VMKIWTTFLEPML 777
Y D I ED LI + ++ DK + +I F+ +L
Sbjct: 780 LAYEDKQILEDAAALIIHHVKRQTGIQKEDKYKIKQIMHHFIPDLL 825
Score = 240 (89.5 bits), Expect = 3.8e-85, Sum P(4) = 3.8e-85
Identities = 46/80 (57%), Positives = 60/80 (75%)
Query: 41 QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDL 100
Q+L DAL+YL VK F + + Y+DFL++MK+FK+Q IDT GVI+RV +LFKGH DL
Sbjct: 119 QRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDL 178
Query: 101 ILGFNTFLPKGYEITLPLED 120
I+GFNTFLP GY+I + D
Sbjct: 179 IMGFNTFLPPGYKIEVQTND 198
Score = 188 (71.2 bits), Expect = 3.8e-85, Sum P(4) = 3.8e-85
Identities = 43/109 (39%), Positives = 65/109 (59%)
Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKS-----------ITE--VY 173
+PVEF AIN+VNKIK RFQG +YK+FL+IL+ Y+KE ++ +TE VY
Sbjct: 300 QPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVY 359
Query: 174 QEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGR-NSILRDRSSAM 221
+V LF++ DLL EF FLPD++ + + + + +S+ D +
Sbjct: 360 AQVARLFKNQEDLLSEFGQFLPDANSSVLLSKTTAEKVDSVRNDHGGTV 408
Score = 133 (51.9 bits), Expect = 3.8e-85, Sum P(4) = 3.8e-85
Identities = 28/69 (40%), Positives = 43/69 (62%)
Query: 343 NAMKSMFSQELSFCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPD 400
+A K E F +KV+ LR + Y+ FLRCL ++ +E+I+R+EL LV LG++P+
Sbjct: 455 DASKHGVGTESLFFDKVRKALRSAEAYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPE 514
Query: 401 LMDGFNGFL 409
L + F FL
Sbjct: 515 LFNWFKNFL 523
Score = 125 (49.1 bits), Expect = 4.9e-58, Sum P(3) = 4.9e-58
Identities = 25/79 (31%), Positives = 45/79 (56%)
Query: 117 PLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEV 176
P++ +Q + VE +A+++++++K +F VY FLDI+ ++ ++ V V
Sbjct: 111 PVQGQQQFQRLKVE--DALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRV 168
Query: 177 EALFQDHPDLLEEFTHFLP 195
LF+ HPDL+ F FLP
Sbjct: 169 SQLFKGHPDLIMGFNTFLP 187
Score = 87 (35.7 bits), Expect = 4.6e-54, Sum P(3) = 4.6e-54
Identities = 28/82 (34%), Positives = 40/82 (48%)
Query: 41 QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDF-KAQR-IDTAG-----------VI 87
Q + N A+ Y+ +K+ FQ + + Y FLE++ + K QR AG V
Sbjct: 300 QPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVY 359
Query: 88 ARVKELFKGHRDLILGFNTFLP 109
A+V LFK DL+ F FLP
Sbjct: 360 AQVARLFKNQEDLLSEFGQFLP 381
Score = 72 (30.4 bits), Expect = 2.1e-43, Sum P(2) = 2.1e-43
Identities = 26/105 (24%), Positives = 45/105 (42%)
Query: 334 PVSSSYDDKNAMKSMFSQELSFCEKVKDKLRDD---YQEFLRCLHLYTKEIITRSELQSL 390
PV+ + + LS+ ++VK + Y +FL + + + I + S
Sbjct: 108 PVAPVQGQQQFQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISR 167
Query: 391 VGDLLGRYPDLMDGFNGFLARCEKSEELLADVMSKKSLWNEGRIP 435
V L +PDL+ GFN FL K E D+++ + +IP
Sbjct: 168 VSQLFKGHPDLIMGFNTFLPPGYKIEVQTNDMVNVTTPGQVHQIP 212
Score = 68 (29.0 bits), Expect = 2.9e-63, Sum P(3) = 2.9e-63
Identities = 25/94 (26%), Positives = 41/94 (43%)
Query: 349 FSQELSFCEKVKDKLR---DDYQEFLRCLHLYTKE-------------IITRSELQSLVG 392
F+ +++ K+K++ + D Y+ FL LH Y KE +T E+ + V
Sbjct: 304 FNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVYAQVA 363
Query: 393 DLLGRYPDLMDGFNGFLARCEKSEELLADVMSKK 426
L DL+ F FL S LL+ ++K
Sbjct: 364 RLFKNQEDLLSEFGQFLPDANSSV-LLSKTTAEK 396
Score = 60 (26.2 bits), Expect = 2.0e-62, Sum P(3) = 2.0e-62
Identities = 16/58 (27%), Positives = 29/58 (50%)
Query: 137 FVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFL 194
F +K++ + + Y++FL L ++ +E S E+ Q V P+L F +FL
Sbjct: 467 FFDKVRKALRSAE-AYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPELFNWFKNFL 523
Score = 52 (23.4 bits), Expect = 2.6e-41, Sum P(2) = 2.6e-41
Identities = 16/56 (28%), Positives = 26/56 (46%)
Query: 64 EKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLE 119
E Y++FL + F + I A ++ V +L F FL GY+ ++ LE
Sbjct: 479 EAYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPELFNWFKNFL--GYKESVHLE 532
Score = 41 (19.5 bits), Expect = 3.0e-29, Sum P(3) = 3.0e-29
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 378 TKEIITRSELQSLVGDLLGRYPDLMDG 404
T E+I R LQ + D + D++DG
Sbjct: 661 TSEVIHRKALQRIYAD---KAADIIDG 684
Score = 37 (18.1 bits), Expect = 7.7e-29, Sum P(3) = 7.7e-29
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 399 PDLMDGFNGFLARCEKSEELLADV 422
PDL+ G L+ E+ EE DV
Sbjct: 822 PDLLFAQRGDLSDVEEEEEEEMDV 845
>MGI|MGI:107157 [details] [associations]
symbol:Sin3a "transcriptional regulator, SIN3A (yeast)"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO;IGI]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0000785 "chromatin"
evidence=ISO] [GO:0001102 "RNA polymerase II activating
transcription factor binding" evidence=ISO] [GO:0001103 "RNA
polymerase II repressing transcription factor binding"
evidence=IPI] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=IGI] [GO:0001701 "in utero embryonic
development" evidence=IMP] [GO:0002218 "activation of innate immune
response" evidence=ISO] [GO:0002230 "positive regulation of defense
response to virus by host" evidence=ISO] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IMP] [GO:0003714 "transcription corepressor
activity" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005667 "transcription
factor complex" evidence=IPI] [GO:0006260 "DNA replication"
evidence=IMP] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0006476 "protein deacetylation"
evidence=ISO] [GO:0007568 "aging" evidence=ISO] [GO:0008134
"transcription factor binding" evidence=IPI] [GO:0010243 "response
to organic nitrogen" evidence=ISO] [GO:0010971 "positive regulation
of G2/M transition of mitotic cell cycle" evidence=IMP] [GO:0016580
"Sin3 complex" evidence=ISO] [GO:0017053 "transcriptional repressor
complex" evidence=IDA;IPI] [GO:0031937 "positive regulation of
chromatin silencing" evidence=ISO] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033558 "protein deacetylase activity"
evidence=ISO] [GO:0034613 "cellular protein localization"
evidence=IMP] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0043234 "protein complex" evidence=ISO]
[GO:0043619 "regulation of transcription from RNA polymerase II
promoter in response to oxidative stress" evidence=ISO] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0051595 "response to
methylglyoxal" evidence=IDA] [GO:0071333 "cellular response to
glucose stimulus" evidence=IDA] [GO:1900181 "negative regulation of
protein localization to nucleus" evidence=ISO] [GO:1901675
"negative regulation of histone H3-K27 acetylation" evidence=ISO]
[GO:2000678 "negative regulation of transcription regulatory region
DNA binding" evidence=ISO] InterPro:IPR003822 Pfam:PF02671
PROSITE:PS51477 MGI:MGI:107157 GO:GO:0017053 GO:GO:0043066
GO:GO:0005730 GO:GO:0000776 GO:GO:0034613 GO:GO:0071333
GO:GO:0003677 GO:GO:0006260 GO:GO:0007568 GO:GO:0001701
GO:GO:0003700 GO:GO:0003682 GO:GO:0005667 GO:GO:0010243
GO:GO:0051595 GO:GO:0001106 GO:GO:0043619 GO:GO:0016580
Gene3D:1.20.1160.11 SUPFAM:SSF47762 PDB:1S5R PDBsum:1S5R
GO:GO:0051329 PDB:1G1E PDB:1S5Q PDBsum:1G1E PDBsum:1S5Q PDB:2L9S
PDBsum:2L9S eggNOG:COG5602 KO:K11644 InterPro:IPR013194
Pfam:PF08295 SMART:SM00761 PDB:2RMS PDBsum:2RMS PDB:2LD7
PDBsum:2LD7 CTD:25942 HOVERGEN:HBG060425 OMA:PNQNGCQ
OrthoDB:EOG48KR9G EMBL:L36831 EMBL:U22394 EMBL:AK220292
EMBL:BC052716 EMBL:BC053385 EMBL:L38620 EMBL:L38621 IPI:IPI00276051
IPI:IPI00985713 PIR:A56068 PIR:I61713 RefSeq:NP_001103820.1
RefSeq:NP_001103821.1 RefSeq:NP_035508.2 UniGene:Mm.15755 PDB:2RMR
PDBsum:2RMR ProteinModelPortal:Q60520 SMR:Q60520 DIP:DIP-469N
IntAct:Q60520 MINT:MINT-1510506 STRING:Q60520 PhosphoSite:Q60520
PaxDb:Q60520 PRIDE:Q60520 Ensembl:ENSMUST00000049169
Ensembl:ENSMUST00000167715 Ensembl:ENSMUST00000168177
Ensembl:ENSMUST00000168502 Ensembl:ENSMUST00000168678 GeneID:20466
KEGG:mmu:20466 UCSC:uc009ptx.2 UCSC:uc012gtw.1
GeneTree:ENSGT00390000007239 InParanoid:Q570Z7
EvolutionaryTrace:Q60520 NextBio:298567 Bgee:Q60520
CleanEx:MM_SIN3A Genevestigator:Q60520
GermOnline:ENSMUSG00000042557 Uniprot:Q60520
Length = 1274
Score = 473 (171.6 bits), Expect = 3.8e-85, Sum P(4) = 3.8e-85
Identities = 109/287 (37%), Positives = 162/287 (56%)
Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQ 558
E+D ++C+R SYR LPK+Y P + RT L EVLND WVS S SED +F +K Q
Sbjct: 546 EIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVSSKKTQ 605
Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEK-INNNTIKTDGPIRVEDHF--TA-- 613
YEE ++RCED+RFELD++LE+ N+ T RV E ++K ++ + + R+++ T+
Sbjct: 606 YEEHIYRCEDERFELDVVLET-NLATIRVLEAIQKKLSRLSAEEQAKFRLDNTLGGTSEV 664
Query: 614 LNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSK 673
++ + ++R+Y D D++D LRKN S+A+P++L RLK K+EEW + FNKVW E K
Sbjct: 665 IHRKALQRIYADKAADIIDGLRKNPSIAVPIVLKRLKMKEEEWREAQRGFNKVWREQNEK 724
Query: 674 NYHKSLDHRSFYFKQQDSKSLGAKAL-SAXXXXXXXXXXXXDDVLLAIAAGNRRSIVPHL 732
Y KSLDH+ FKQ D+K L +K+L + + + G PHL
Sbjct: 725 YYLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQATEENAGVPVG------PHL 778
Query: 733 EFEYSDPDIHEDLYQLIKYSCGEMCTTEQLDK--VMKIWTTFLEPML 777
Y D I ED LI + ++ DK + +I F+ +L
Sbjct: 779 SLAYEDKQILEDAAALIIHHVKRQTGIQKEDKYKIKQIMHHFIPDLL 825
Score = 240 (89.5 bits), Expect = 3.8e-85, Sum P(4) = 3.8e-85
Identities = 46/80 (57%), Positives = 60/80 (75%)
Query: 41 QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDL 100
Q+L DAL+YL VK F + + Y+DFL++MK+FK+Q IDT GVI+RV +LFKGH DL
Sbjct: 119 QRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDL 178
Query: 101 ILGFNTFLPKGYEITLPLED 120
I+GFNTFLP GY+I + D
Sbjct: 179 IMGFNTFLPPGYKIEVQTND 198
Score = 188 (71.2 bits), Expect = 3.8e-85, Sum P(4) = 3.8e-85
Identities = 43/109 (39%), Positives = 65/109 (59%)
Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKS-----------ITE--VY 173
+PVEF AIN+VNKIK RFQG +YK+FL+IL+ Y+KE ++ +TE VY
Sbjct: 300 QPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVY 359
Query: 174 QEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGR-NSILRDRSSAM 221
+V LF++ DLL EF FLPD++ + + + + +S+ D +
Sbjct: 360 AQVARLFKNQEDLLSEFGQFLPDANSSVLLSKTTAEKVDSVRNDHGGTV 408
Score = 133 (51.9 bits), Expect = 3.8e-85, Sum P(4) = 3.8e-85
Identities = 28/69 (40%), Positives = 43/69 (62%)
Query: 343 NAMKSMFSQELSFCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPD 400
+A K E F +KV+ LR + Y+ FLRCL ++ +E+I+R+EL LV LG++P+
Sbjct: 455 DASKHGVGTESLFFDKVRKALRSAEAYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPE 514
Query: 401 LMDGFNGFL 409
L + F FL
Sbjct: 515 LFNWFKNFL 523
Score = 125 (49.1 bits), Expect = 4.9e-58, Sum P(3) = 4.9e-58
Identities = 25/79 (31%), Positives = 45/79 (56%)
Query: 117 PLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEV 176
P++ +Q + VE +A+++++++K +F VY FLDI+ ++ ++ V V
Sbjct: 111 PVQGQQQFQRLKVE--DALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRV 168
Query: 177 EALFQDHPDLLEEFTHFLP 195
LF+ HPDL+ F FLP
Sbjct: 169 SQLFKGHPDLIMGFNTFLP 187
Score = 87 (35.7 bits), Expect = 4.6e-54, Sum P(3) = 4.6e-54
Identities = 28/82 (34%), Positives = 40/82 (48%)
Query: 41 QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDF-KAQR-IDTAG-----------VI 87
Q + N A+ Y+ +K+ FQ + + Y FLE++ + K QR AG V
Sbjct: 300 QPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVY 359
Query: 88 ARVKELFKGHRDLILGFNTFLP 109
A+V LFK DL+ F FLP
Sbjct: 360 AQVARLFKNQEDLLSEFGQFLP 381
Score = 72 (30.4 bits), Expect = 2.1e-43, Sum P(2) = 2.1e-43
Identities = 26/105 (24%), Positives = 45/105 (42%)
Query: 334 PVSSSYDDKNAMKSMFSQELSFCEKVKDKLRDD---YQEFLRCLHLYTKEIITRSELQSL 390
PV+ + + LS+ ++VK + Y +FL + + + I + S
Sbjct: 108 PVAPVQGQQQFQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISR 167
Query: 391 VGDLLGRYPDLMDGFNGFLARCEKSEELLADVMSKKSLWNEGRIP 435
V L +PDL+ GFN FL K E D+++ + +IP
Sbjct: 168 VSQLFKGHPDLIMGFNTFLPPGYKIEVQTNDMVNVTTPGQVHQIP 212
Score = 68 (29.0 bits), Expect = 2.9e-63, Sum P(3) = 2.9e-63
Identities = 25/94 (26%), Positives = 41/94 (43%)
Query: 349 FSQELSFCEKVKDKLR---DDYQEFLRCLHLYTKE-------------IITRSELQSLVG 392
F+ +++ K+K++ + D Y+ FL LH Y KE +T E+ + V
Sbjct: 304 FNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVYAQVA 363
Query: 393 DLLGRYPDLMDGFNGFLARCEKSEELLADVMSKK 426
L DL+ F FL S LL+ ++K
Sbjct: 364 RLFKNQEDLLSEFGQFLPDANSSV-LLSKTTAEK 396
Score = 60 (26.2 bits), Expect = 2.0e-62, Sum P(3) = 2.0e-62
Identities = 16/58 (27%), Positives = 29/58 (50%)
Query: 137 FVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFL 194
F +K++ + + Y++FL L ++ +E S E+ Q V P+L F +FL
Sbjct: 467 FFDKVRKALRSAE-AYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPELFNWFKNFL 523
Score = 52 (23.4 bits), Expect = 2.6e-41, Sum P(2) = 2.6e-41
Identities = 16/56 (28%), Positives = 26/56 (46%)
Query: 64 EKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLE 119
E Y++FL + F + I A ++ V +L F FL GY+ ++ LE
Sbjct: 479 EAYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPELFNWFKNFL--GYKESVHLE 532
Score = 41 (19.5 bits), Expect = 3.0e-29, Sum P(3) = 3.0e-29
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 378 TKEIITRSELQSLVGDLLGRYPDLMDG 404
T E+I R LQ + D + D++DG
Sbjct: 661 TSEVIHRKALQRIYAD---KAADIIDG 684
Score = 37 (18.1 bits), Expect = 7.7e-29, Sum P(3) = 7.7e-29
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 399 PDLMDGFNGFLARCEKSEELLADV 422
PDL+ G L+ E+ EE DV
Sbjct: 822 PDLLFAQRGDLSDVEEEEEEEMDV 845
>RGD|1311598 [details] [associations]
symbol:Sin3a "SIN3 transcription regulator homolog A (yeast)"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0000776 "kinetochore" evidence=IEA;ISO] [GO:0000785 "chromatin"
evidence=IDA] [GO:0001102 "RNA polymerase II activating
transcription factor binding" evidence=ISO] [GO:0001103 "RNA
polymerase II repressing transcription factor binding"
evidence=IEA;ISO] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=IEA;ISO] [GO:0001701 "in utero
embryonic development" evidence=IEA;ISO] [GO:0002218 "activation of
innate immune response" evidence=ISO] [GO:0002230 "positive
regulation of defense response to virus by host" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IEA;ISO] [GO:0003682 "chromatin
binding" evidence=IEA;ISO] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISO]
[GO:0003714 "transcription corepressor activity" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005667 "transcription factor complex"
evidence=IEA;ISO] [GO:0006260 "DNA replication" evidence=IEA;ISO]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0006476 "protein deacetylation" evidence=ISO]
[GO:0007568 "aging" evidence=IDA] [GO:0008134 "transcription factor
binding" evidence=ISO] [GO:0010243 "response to organic nitrogen"
evidence=IDA] [GO:0016580 "Sin3 complex" evidence=IEA;ISO]
[GO:0017053 "transcriptional repressor complex" evidence=IEA;ISO]
[GO:0031937 "positive regulation of chromatin silencing"
evidence=ISO] [GO:0032403 "protein complex binding" evidence=IDA]
[GO:0033558 "protein deacetylase activity" evidence=ISO]
[GO:0034613 "cellular protein localization" evidence=IEA;ISO]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA;ISO] [GO:0043234 "protein complex" evidence=IDA]
[GO:0043619 "regulation of transcription from RNA polymerase II
promoter in response to oxidative stress" evidence=IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0051329 "interphase of
mitotic cell cycle" evidence=IEA;ISO] [GO:0051595 "response to
methylglyoxal" evidence=IEA;ISO] [GO:0071333 "cellular response to
glucose stimulus" evidence=IEA;ISO] [GO:1900181 "negative
regulation of protein localization to nucleus" evidence=ISO]
[GO:1901675 "negative regulation of histone H3-K27 acetylation"
evidence=ISO] [GO:2000678 "negative regulation of transcription
regulatory region DNA binding" evidence=ISO] InterPro:IPR003822
Pfam:PF02671 PROSITE:PS51477 RGD:1311598 GO:GO:0017053
GO:GO:0043066 GO:GO:0043234 GO:GO:0000776 GO:GO:0034613
GO:GO:0032403 GO:GO:0071333 GO:GO:0003677 GO:GO:0006260
GO:GO:0007568 GO:GO:0001701 GO:GO:0000785 GO:GO:0003700
GO:GO:0003682 GO:GO:0005667 GO:GO:0010243 GO:GO:0051595
GO:GO:0001106 GO:GO:0043619 GO:GO:0016580 Gene3D:1.20.1160.11
SUPFAM:SSF47762 GO:GO:0051329 InterPro:IPR013194 Pfam:PF08295
SMART:SM00761 OrthoDB:EOG48KR9G IPI:IPI00190130
Ensembl:ENSRNOT00000041686 UCSC:RGD:1311598 ArrayExpress:D3ZIN2
Uniprot:D3ZIN2
Length = 1282
Score = 473 (171.6 bits), Expect = 4.0e-85, Sum P(4) = 4.0e-85
Identities = 109/287 (37%), Positives = 162/287 (56%)
Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQ 558
E+D ++C+R SYR LPK+Y P + RT L EVLND WVS S SED +F +K Q
Sbjct: 546 EIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVSSKKTQ 605
Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEK-INNNTIKTDGPIRVEDHF--TA-- 613
YEE ++RCED+RFELD++LE+ N+ T RV E ++K ++ + + R+++ T+
Sbjct: 606 YEEHIYRCEDERFELDVVLET-NLATIRVLEAIQKKLSRLSAEEQAKFRLDNTLGGTSEV 664
Query: 614 LNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSK 673
++ + ++R+Y D D++D LRKN S+A+P++L RLK K+EEW + FNKVW E K
Sbjct: 665 IHRKALQRIYADKAADIIDGLRKNPSIAVPIVLKRLKMKEEEWREAQRGFNKVWREQNEK 724
Query: 674 NYHKSLDHRSFYFKQQDSKSLGAKAL-SAXXXXXXXXXXXXDDVLLAIAAGNRRSIVPHL 732
Y KSLDH+ FKQ D+K L +K+L + + + G PHL
Sbjct: 725 YYLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQATEENAGVPVG------PHL 778
Query: 733 EFEYSDPDIHEDLYQLIKYSCGEMCTTEQLDK--VMKIWTTFLEPML 777
Y D I ED LI + ++ DK + +I F+ +L
Sbjct: 779 SLAYEDKQILEDAAALIIHHVKRQTGIQKEDKYKIKQIMHHFIPDLL 825
Score = 240 (89.5 bits), Expect = 4.0e-85, Sum P(4) = 4.0e-85
Identities = 46/80 (57%), Positives = 60/80 (75%)
Query: 41 QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDL 100
Q+L DAL+YL VK F + + Y+DFL++MK+FK+Q IDT GVI+RV +LFKGH DL
Sbjct: 119 QRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDL 178
Query: 101 ILGFNTFLPKGYEITLPLED 120
I+GFNTFLP GY+I + D
Sbjct: 179 IMGFNTFLPPGYKIEVQTND 198
Score = 188 (71.2 bits), Expect = 4.0e-85, Sum P(4) = 4.0e-85
Identities = 43/109 (39%), Positives = 65/109 (59%)
Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKS-----------ITE--VY 173
+PVEF AIN+VNKIK RFQG +YK+FL+IL+ Y+KE ++ +TE VY
Sbjct: 300 QPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVY 359
Query: 174 QEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGR-NSILRDRSSAM 221
+V LF++ DLL EF FLPD++ + + + + +S+ D +
Sbjct: 360 AQVARLFKNQEDLLSEFGQFLPDANSSVLLSKTTAEKVDSVRNDHGGTV 408
Score = 133 (51.9 bits), Expect = 4.0e-85, Sum P(4) = 4.0e-85
Identities = 28/69 (40%), Positives = 43/69 (62%)
Query: 343 NAMKSMFSQELSFCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPD 400
+A K E F +KV+ LR + Y+ FLRCL ++ +E+I+R+EL LV LG++P+
Sbjct: 455 DASKHGVGTESLFFDKVRKALRSAEAYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPE 514
Query: 401 LMDGFNGFL 409
L + F FL
Sbjct: 515 LFNWFKNFL 523
Score = 125 (49.1 bits), Expect = 5.1e-58, Sum P(3) = 5.1e-58
Identities = 25/79 (31%), Positives = 45/79 (56%)
Query: 117 PLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEV 176
P++ +Q + VE +A+++++++K +F VY FLDI+ ++ ++ V V
Sbjct: 111 PVQGQQQFQRLKVE--DALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRV 168
Query: 177 EALFQDHPDLLEEFTHFLP 195
LF+ HPDL+ F FLP
Sbjct: 169 SQLFKGHPDLIMGFNTFLP 187
Score = 87 (35.7 bits), Expect = 4.8e-54, Sum P(3) = 4.8e-54
Identities = 28/82 (34%), Positives = 40/82 (48%)
Query: 41 QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDF-KAQR-IDTAG-----------VI 87
Q + N A+ Y+ +K+ FQ + + Y FLE++ + K QR AG V
Sbjct: 300 QPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVY 359
Query: 88 ARVKELFKGHRDLILGFNTFLP 109
A+V LFK DL+ F FLP
Sbjct: 360 AQVARLFKNQEDLLSEFGQFLP 381
Score = 69 (29.3 bits), Expect = 4.4e-43, Sum P(2) = 4.4e-43
Identities = 24/86 (27%), Positives = 40/86 (46%)
Query: 353 LSFCEKVKDKLRDD---YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFL 409
LS+ ++VK + Y +FL + + + I + S V L +PDL+ GFN FL
Sbjct: 127 LSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIMGFNTFL 186
Query: 410 ARCEKSEELLADVMSKKSLWNEGRIP 435
K E D+++ + +IP
Sbjct: 187 PPGYKIEVQTNDMVNVTTPGQVHQIP 212
Score = 68 (29.0 bits), Expect = 3.0e-63, Sum P(3) = 3.0e-63
Identities = 25/94 (26%), Positives = 41/94 (43%)
Query: 349 FSQELSFCEKVKDKLR---DDYQEFLRCLHLYTKE-------------IITRSELQSLVG 392
F+ +++ K+K++ + D Y+ FL LH Y KE +T E+ + V
Sbjct: 304 FNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVYAQVA 363
Query: 393 DLLGRYPDLMDGFNGFLARCEKSEELLADVMSKK 426
L DL+ F FL S LL+ ++K
Sbjct: 364 RLFKNQEDLLSEFGQFLPDANSSV-LLSKTTAEK 396
Score = 60 (26.2 bits), Expect = 2.0e-62, Sum P(3) = 2.0e-62
Identities = 16/58 (27%), Positives = 29/58 (50%)
Query: 137 FVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFL 194
F +K++ + + Y++FL L ++ +E S E+ Q V P+L F +FL
Sbjct: 467 FFDKVRKALRSAE-AYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPELFNWFKNFL 523
Score = 52 (23.4 bits), Expect = 2.7e-41, Sum P(2) = 2.7e-41
Identities = 16/56 (28%), Positives = 26/56 (46%)
Query: 64 EKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLE 119
E Y++FL + F + I A ++ V +L F FL GY+ ++ LE
Sbjct: 479 EAYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPELFNWFKNFL--GYKESVHLE 532
Score = 41 (19.5 bits), Expect = 3.1e-29, Sum P(3) = 3.1e-29
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 378 TKEIITRSELQSLVGDLLGRYPDLMDG 404
T E+I R LQ + D + D++DG
Sbjct: 661 TSEVIHRKALQRIYAD---KAADIIDG 684
Score = 37 (18.1 bits), Expect = 7.9e-29, Sum P(3) = 7.9e-29
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 399 PDLMDGFNGFLARCEKSEELLADV 422
PDL+ G L+ E+ EE DV
Sbjct: 822 PDLLFAQRGDLSDVEEEEEEEMDV 845
>UNIPROTKB|Q96ST3 [details] [associations]
symbol:SIN3A "Paired amphipathic helix protein Sin3a"
species:9606 "Homo sapiens" [GO:0007568 "aging" evidence=IEA]
[GO:0010243 "response to organic nitrogen" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0032403 "protein complex binding" evidence=IEA] [GO:0034613
"cellular protein localization" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0043619
"regulation of transcription from RNA polymerase II promoter in
response to oxidative stress" evidence=IEA] [GO:0051329 "interphase
of mitotic cell cycle" evidence=IEA] [GO:0051595 "response to
methylglyoxal" evidence=IEA] [GO:0071333 "cellular response to
glucose stimulus" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0001103 "RNA polymerase II repressing
transcription factor binding" evidence=IEA] [GO:0001106 "RNA
polymerase II transcription corepressor activity" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISS;IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0003714
"transcription corepressor activity" evidence=RCA] [GO:0016580
"Sin3 complex" evidence=NAS;IDA] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0007596 "blood coagulation" evidence=TAS]
[GO:0044255 "cellular lipid metabolic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0001102 "RNA polymerase
II activating transcription factor binding" evidence=IPI]
[GO:0033558 "protein deacetylase activity" evidence=IMP]
[GO:0006476 "protein deacetylation" evidence=IMP] [GO:1900181
"negative regulation of protein localization to nucleus"
evidence=IMP] [GO:2000678 "negative regulation of transcription
regulatory region DNA binding" evidence=IMP] [GO:1901675 "negative
regulation of histone H3-K27 acetylation" evidence=IMP] [GO:0031937
"positive regulation of chromatin silencing" evidence=IMP]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0002230 "positive
regulation of defense response to virus by host" evidence=IMP]
[GO:0002218 "activation of innate immune response" evidence=IMP]
Reactome:REACT_604 Reactome:REACT_111217 InterPro:IPR003822
Pfam:PF02671 PROSITE:PS51477 GO:GO:0017053
Pathway_Interaction_DB:telomerasepathway GO:GO:0043066
GO:GO:0005730 GO:GO:0000776 GO:GO:0034613 GO:GO:0044281
GO:GO:0071333 GO:GO:0003677 GO:GO:0007596 GO:GO:0006260
GO:GO:0007568 GO:GO:0001701 GO:GO:0045944 GO:GO:0003700
GO:GO:0044255 GO:GO:0003682 GO:GO:0002230 GO:GO:0005667
GO:GO:0000122 GO:GO:0010243 GO:GO:0002218
Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0051595
GO:GO:0001106 GO:GO:0043619 GO:GO:0016580 GO:GO:0031937
GO:GO:2000678 Gene3D:1.20.1160.11 SUPFAM:SSF47762 GO:GO:0033558
PDB:1PO4 PDBsum:1PO4 GO:GO:0051329 eggNOG:COG5602 KO:K11644
InterPro:IPR013194 Pfam:PF08295 SMART:SM00761 EMBL:AF418569
EMBL:BC018973 EMBL:BC137098 EMBL:BC137099 EMBL:AK027559
EMBL:AK074903 EMBL:AK096477 EMBL:AY044430 EMBL:AL117513
IPI:IPI00170596 PIR:T17282 RefSeq:NP_001138829.1
RefSeq:NP_001138830.1 RefSeq:NP_056292.1 UniGene:Hs.513039
ProteinModelPortal:Q96ST3 SMR:Q96ST3 IntAct:Q96ST3
MINT:MINT-2815493 STRING:Q96ST3 PhosphoSite:Q96ST3 DMDM:37999759
PaxDb:Q96ST3 PeptideAtlas:Q96ST3 PRIDE:Q96ST3
Ensembl:ENST00000360439 Ensembl:ENST00000394947
Ensembl:ENST00000394949 GeneID:25942 KEGG:hsa:25942 UCSC:uc002bai.3
CTD:25942 GeneCards:GC15M075661 H-InvDB:HIX0012443
H-InvDB:HIX0019634 H-InvDB:HIX0172841 HGNC:HGNC:19353 HPA:CAB004506
MIM:607776 neXtProt:NX_Q96ST3 PharmGKB:PA134993567
HOVERGEN:HBG060425 InParanoid:Q96ST3 OMA:PNQNGCQ OrthoDB:EOG48KR9G
PhylomeDB:Q96ST3 ChiTaRS:SIN3A GenomeRNAi:25942 NextBio:47516
Bgee:Q96ST3 CleanEx:HS_SIN3A Genevestigator:Q96ST3
GermOnline:ENSG00000169375 GO:GO:1901675 GO:GO:1900181
Uniprot:Q96ST3
Length = 1273
Score = 473 (171.6 bits), Expect = 6.1e-85, Sum P(4) = 6.1e-85
Identities = 109/287 (37%), Positives = 162/287 (56%)
Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQ 558
E+D ++C+R SYR LPK+Y P + RT L EVLND WVS S SED +F +K Q
Sbjct: 545 EIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVSSKKTQ 604
Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEK-INNNTIKTDGPIRVEDHF--TA-- 613
YEE ++RCED+RFELD++LE+ N+ T RV E ++K ++ + + R+++ T+
Sbjct: 605 YEEHIYRCEDERFELDVVLET-NLATIRVLEAIQKKLSRLSAEEQAKFRLDNTLGGTSEV 663
Query: 614 LNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSK 673
++ + ++R+Y D D++D LRKN S+A+P++L RLK K+EEW + FNKVW E K
Sbjct: 664 IHRKALQRIYADKAADIIDGLRKNPSIAVPIVLKRLKMKEEEWREAQRGFNKVWREQNEK 723
Query: 674 NYHKSLDHRSFYFKQQDSKSLGAKAL-SAXXXXXXXXXXXXDDVLLAIAAGNRRSIVPHL 732
Y KSLDH+ FKQ D+K L +K+L + + + G PHL
Sbjct: 724 YYLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQATEENAGVPVG------PHL 777
Query: 733 EFEYSDPDIHEDLYQLIKYSCGEMCTTEQLDK--VMKIWTTFLEPML 777
Y D I ED LI + ++ DK + +I F+ +L
Sbjct: 778 SLAYEDKQILEDAAALIIHHVKRQTGIQKEDKYKIKQIMHHFIPDLL 824
Score = 240 (89.5 bits), Expect = 6.1e-85, Sum P(4) = 6.1e-85
Identities = 46/80 (57%), Positives = 60/80 (75%)
Query: 41 QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDL 100
Q+L DAL+YL VK F + + Y+DFL++MK+FK+Q IDT GVI+RV +LFKGH DL
Sbjct: 119 QRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDL 178
Query: 101 ILGFNTFLPKGYEITLPLED 120
I+GFNTFLP GY+I + D
Sbjct: 179 IMGFNTFLPPGYKIEVQTND 198
Score = 188 (71.2 bits), Expect = 6.1e-85, Sum P(4) = 6.1e-85
Identities = 43/109 (39%), Positives = 65/109 (59%)
Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKS-----------ITE--VY 173
+PVEF AIN+VNKIK RFQG +YK+FL+IL+ Y+KE ++ +TE VY
Sbjct: 300 QPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVY 359
Query: 174 QEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGR-NSILRDRSSAM 221
+V LF++ DLL EF FLPD++ + + + + +S+ D +
Sbjct: 360 AQVARLFKNQEDLLSEFGQFLPDANSSVLLSKTTAEKVDSVRNDHGGTV 408
Score = 131 (51.2 bits), Expect = 6.1e-85, Sum P(4) = 6.1e-85
Identities = 28/69 (40%), Positives = 43/69 (62%)
Query: 343 NAMKSMFSQELSFCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPD 400
+A K E F +KV+ LR + Y+ FLRCL ++ +E+I+R+EL LV LG++P+
Sbjct: 454 DASKHGGGTESLFFDKVRKALRSAEAYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPE 513
Query: 401 LMDGFNGFL 409
L + F FL
Sbjct: 514 LFNWFKNFL 522
Score = 125 (49.1 bits), Expect = 7.9e-58, Sum P(3) = 7.9e-58
Identities = 25/79 (31%), Positives = 45/79 (56%)
Query: 117 PLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEV 176
P++ +Q + VE +A+++++++K +F VY FLDI+ ++ ++ V V
Sbjct: 111 PVQGQQQFQRLKVE--DALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRV 168
Query: 177 EALFQDHPDLLEEFTHFLP 195
LF+ HPDL+ F FLP
Sbjct: 169 SQLFKGHPDLIMGFNTFLP 187
Score = 87 (35.7 bits), Expect = 7.4e-54, Sum P(3) = 7.4e-54
Identities = 28/82 (34%), Positives = 40/82 (48%)
Query: 41 QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDF-KAQR-IDTAG-----------VI 87
Q + N A+ Y+ +K+ FQ + + Y FLE++ + K QR AG V
Sbjct: 300 QPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVY 359
Query: 88 ARVKELFKGHRDLILGFNTFLP 109
A+V LFK DL+ F FLP
Sbjct: 360 AQVARLFKNQEDLLSEFGQFLP 381
Score = 72 (30.4 bits), Expect = 2.1e-43, Sum P(2) = 2.1e-43
Identities = 26/105 (24%), Positives = 45/105 (42%)
Query: 334 PVSSSYDDKNAMKSMFSQELSFCEKVKDKLRDD---YQEFLRCLHLYTKEIITRSELQSL 390
PV+ + + LS+ ++VK + Y +FL + + + I + S
Sbjct: 108 PVAPVQGQQQFQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISR 167
Query: 391 VGDLLGRYPDLMDGFNGFLARCEKSEELLADVMSKKSLWNEGRIP 435
V L +PDL+ GFN FL K E D+++ + +IP
Sbjct: 168 VSQLFKGHPDLIMGFNTFLPPGYKIEVQTNDMVNVTTPGQVHQIP 212
Score = 68 (29.0 bits), Expect = 2.8e-63, Sum P(3) = 2.8e-63
Identities = 25/94 (26%), Positives = 41/94 (43%)
Query: 349 FSQELSFCEKVKDKLR---DDYQEFLRCLHLYTKE-------------IITRSELQSLVG 392
F+ +++ K+K++ + D Y+ FL LH Y KE +T E+ + V
Sbjct: 304 FNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVYAQVA 363
Query: 393 DLLGRYPDLMDGFNGFLARCEKSEELLADVMSKK 426
L DL+ F FL S LL+ ++K
Sbjct: 364 RLFKNQEDLLSEFGQFLPDANSSV-LLSKTTAEK 396
Score = 60 (26.2 bits), Expect = 2.0e-62, Sum P(3) = 2.0e-62
Identities = 16/58 (27%), Positives = 29/58 (50%)
Query: 137 FVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFL 194
F +K++ + + Y++FL L ++ +E S E+ Q V P+L F +FL
Sbjct: 466 FFDKVRKALRSAE-AYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPELFNWFKNFL 522
Score = 56 (24.8 bits), Expect = 1.0e-41, Sum P(2) = 1.0e-41
Identities = 30/121 (24%), Positives = 51/121 (42%)
Query: 10 MNSQIKRPMISS---RGEPSGQTQVVXXXXXXXAQKLTTN-DALAYLKAVKDIFQDK--- 62
+N++ +RP + R P+G T V K ++ DA + + +F DK
Sbjct: 413 LNNKPQRPSQNGCQIRRHPTGTTPPVKKKPKLLNLKDSSMADASKHGGGTESLFFDKVRK 472
Query: 63 ----REKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPL 118
E Y++FL + F + I A ++ V +L F FL GY+ ++ L
Sbjct: 473 ALRSAEAYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPELFNWFKNFL--GYKESVHL 530
Query: 119 E 119
E
Sbjct: 531 E 531
Score = 41 (19.5 bits), Expect = 3.0e-29, Sum P(3) = 3.0e-29
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 378 TKEIITRSELQSLVGDLLGRYPDLMDG 404
T E+I R LQ + D + D++DG
Sbjct: 660 TSEVIHRKALQRIYAD---KAADIIDG 683
Score = 37 (18.1 bits), Expect = 7.7e-29, Sum P(3) = 7.7e-29
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 399 PDLMDGFNGFLARCEKSEELLADV 422
PDL+ G L+ E+ EE DV
Sbjct: 821 PDLLFAQRGDLSDVEEEEEEEMDV 844
>UNIPROTKB|E1BX21 [details] [associations]
symbol:SIN3A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001106 "RNA polymerase II transcription corepressor
activity" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0016580 "Sin3 complex" evidence=IEA] [GO:0017053
"transcriptional repressor complex" evidence=IEA] [GO:0034613
"cellular protein localization" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0051329
"interphase of mitotic cell cycle" evidence=IEA] [GO:0051595
"response to methylglyoxal" evidence=IEA] [GO:0071333 "cellular
response to glucose stimulus" evidence=IEA] [GO:0000776
"kinetochore" evidence=IEA] [GO:0001103 "RNA polymerase II
repressing transcription factor binding" evidence=IEA]
InterPro:IPR003822 Pfam:PF02671 PROSITE:PS51477 GO:GO:0017053
GO:GO:0043066 GO:GO:0000776 GO:GO:0034613 GO:GO:0071333
GO:GO:0003677 GO:GO:0006260 GO:GO:0003700 GO:GO:0003682
GO:GO:0005667 GO:GO:0051595 GO:GO:0001106 GO:GO:0016580
Gene3D:1.20.1160.11 SUPFAM:SSF47762 GO:GO:0051329
InterPro:IPR013194 Pfam:PF08295 SMART:SM00761 OMA:PNQNGCQ
GeneTree:ENSGT00390000007239 EMBL:AADN02074787 EMBL:AADN02074788
EMBL:AADN02074789 IPI:IPI00598520 Ensembl:ENSGALT00000002511
Uniprot:E1BX21
Length = 1269
Score = 473 (171.6 bits), Expect = 1.6e-84, Sum P(4) = 1.6e-84
Identities = 109/287 (37%), Positives = 162/287 (56%)
Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQ 558
E+D ++C+R SYR LPK+Y P + RT L EVLND WVS S SED +F +K Q
Sbjct: 541 EIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVSSKKTQ 600
Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEK-INNNTIKTDGPIRVEDHF--TA-- 613
YEE ++RCED+RFELD++LE+ N+ T RV E ++K ++ + + R+++ T+
Sbjct: 601 YEEHIYRCEDERFELDVVLET-NLATIRVLEAIQKKLSRLSAEEQAKFRLDNTLGGTSEV 659
Query: 614 LNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSK 673
++ + ++R+Y D D++D LRKN S+A+P++L RLK K+EEW + FNKVW E K
Sbjct: 660 IHRKALQRIYADKAADIIDGLRKNPSVAVPIVLKRLKMKEEEWREAQRGFNKVWREQNEK 719
Query: 674 NYHKSLDHRSFYFKQQDSKSLGAKAL-SAXXXXXXXXXXXXDDVLLAIAAGNRRSIVPHL 732
Y KSLDH+ FKQ D+K L +K+L + + + G PHL
Sbjct: 720 YYLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQASEDNAGVPTG------PHL 773
Query: 733 EFEYSDPDIHEDLYQLIKYSCGEMCTTEQLDK--VMKIWTTFLEPML 777
Y D I ED LI + ++ DK + +I F+ +L
Sbjct: 774 SLAYEDKQILEDAASLIIHHVKRQTGIQKEDKYKIKQIMYHFIPDLL 820
Score = 233 (87.1 bits), Expect = 1.6e-84, Sum P(4) = 1.6e-84
Identities = 45/78 (57%), Positives = 58/78 (74%)
Query: 43 LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
L DAL+YL VK F + + Y+DFL++MK+FK+Q IDT GVI+RV +LFKGH DLI+
Sbjct: 116 LQVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIM 175
Query: 103 GFNTFLPKGYEITLPLED 120
GFNTFLP GY+I + D
Sbjct: 176 GFNTFLPPGYKIEVQTND 193
Score = 189 (71.6 bits), Expect = 1.6e-84, Sum P(4) = 1.6e-84
Identities = 45/122 (36%), Positives = 71/122 (58%)
Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKS-----------ITE--VY 173
+PVEF AIN+VNKIK RFQG +YK+FL+IL+ Y+KE ++ +TE VY
Sbjct: 295 QPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVY 354
Query: 174 QEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGR-NSILRDRSSAMPTARQVHVDKK 232
+V LF++ DLL EF FLPD++ + + + + S+ D T ++ ++ K
Sbjct: 355 AQVARLFKNQEDLLSEFGQFLPDANSSVLLSKTTAEKVESVRNDHGG---TVKKPQLNNK 411
Query: 233 ER 234
++
Sbjct: 412 QQ 413
Score = 133 (51.9 bits), Expect = 1.6e-84, Sum P(4) = 1.6e-84
Identities = 29/68 (42%), Positives = 41/68 (60%)
Query: 344 AMKSMFSQELSFCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDL 401
A K E F EKV+ LR + Y+ FLRCL ++ +E+I+R+EL LV LG++P+L
Sbjct: 451 ASKHGVGTESLFFEKVRKALRSTEAYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPEL 510
Query: 402 MDGFNGFL 409
F FL
Sbjct: 511 FTWFKNFL 518
Score = 125 (49.1 bits), Expect = 4.8e-58, Sum P(3) = 4.8e-58
Identities = 22/67 (32%), Positives = 40/67 (59%)
Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
++ E+A+++++++K +F VY FLDI+ ++ ++ V V LF+ HPDL+
Sbjct: 116 LQVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIM 175
Query: 189 EFTHFLP 195
F FLP
Sbjct: 176 GFNTFLP 182
Score = 87 (35.7 bits), Expect = 4.5e-54, Sum P(3) = 4.5e-54
Identities = 28/82 (34%), Positives = 40/82 (48%)
Query: 41 QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDF-KAQR-IDTAG-----------VI 87
Q + N A+ Y+ +K+ FQ + + Y FLE++ + K QR AG V
Sbjct: 295 QPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVY 354
Query: 88 ARVKELFKGHRDLILGFNTFLP 109
A+V LFK DL+ F FLP
Sbjct: 355 AQVARLFKNQEDLLSEFGQFLP 376
Score = 69 (29.3 bits), Expect = 4.3e-43, Sum P(2) = 4.3e-43
Identities = 24/86 (27%), Positives = 40/86 (46%)
Query: 353 LSFCEKVKDKLRDD---YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFL 409
LS+ ++VK + Y +FL + + + I + S V L +PDL+ GFN FL
Sbjct: 122 LSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIMGFNTFL 181
Query: 410 ARCEKSEELLADVMSKKSLWNEGRIP 435
K E D+++ + +IP
Sbjct: 182 PPGYKIEVQTNDMVNVTTPGQVHQIP 207
Score = 68 (29.0 bits), Expect = 1.5e-62, Sum P(3) = 1.5e-62
Identities = 25/94 (26%), Positives = 41/94 (43%)
Query: 349 FSQELSFCEKVKDKLR---DDYQEFLRCLHLYTKE-------------IITRSELQSLVG 392
F+ +++ K+K++ + D Y+ FL LH Y KE +T E+ + V
Sbjct: 299 FNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVYAQVA 358
Query: 393 DLLGRYPDLMDGFNGFLARCEKSEELLADVMSKK 426
L DL+ F FL S LL+ ++K
Sbjct: 359 RLFKNQEDLLSEFGQFLPDANSSV-LLSKTTAEK 391
Score = 59 (25.8 bits), Expect = 1.3e-61, Sum P(3) = 1.3e-61
Identities = 16/58 (27%), Positives = 28/58 (48%)
Query: 137 FVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFL 194
F K++ + + Y++FL L ++ +E S E+ Q V P+L F +FL
Sbjct: 462 FFEKVRKALRSTE-AYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPELFTWFKNFL 518
Score = 52 (23.4 bits), Expect = 2.6e-41, Sum P(2) = 2.6e-41
Identities = 15/56 (26%), Positives = 26/56 (46%)
Query: 64 EKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLE 119
E Y++FL + F + I A ++ V +L F FL GY+ ++ +E
Sbjct: 474 EAYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPELFTWFKNFL--GYKESVHME 527
Score = 41 (19.5 bits), Expect = 7.9e-28, Sum P(4) = 7.9e-28
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 378 TKEIITRSELQSLVGDLLGRYPDLMDG 404
T E+I R LQ + D + D++DG
Sbjct: 656 TSEVIHRKALQRIYAD---KAADIIDG 679
Score = 38 (18.4 bits), Expect = 2.8e-37, Sum P(4) = 2.8e-37
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 839 EQSSSSRAWLPNGDH 853
EQ+S A +P G H
Sbjct: 758 EQASEDNAGVPTGPH 772
Score = 37 (18.1 bits), Expect = 3.4e-28, Sum P(3) = 3.4e-28
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 399 PDLMDGFNGFLARCEKSEELLADV 422
PDL+ G L+ E+ EE DV
Sbjct: 817 PDLLFAQRGELSDVEEEEEEEMDV 840
>ZFIN|ZDB-GENE-030131-2066 [details] [associations]
symbol:sin3ab "SIN3 homolog A, transcription
regulator (yeast) b" species:7955 "Danio rerio" [GO:0005634
"nucleus" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR003822 Pfam:PF02671
PROSITE:PS51477 ZFIN:ZDB-GENE-030131-2066 GO:GO:0005634
GO:GO:0006355 Gene3D:1.20.1160.11 SUPFAM:SSF47762
InterPro:IPR013194 Pfam:PF08295 SMART:SM00761
GeneTree:ENSGT00390000007239 EMBL:BX663612 IPI:IPI00802882
Ensembl:ENSDART00000083555 Uniprot:E7F0R9
Length = 1264
Score = 450 (163.5 bits), Expect = 6.4e-83, Sum P(4) = 6.4e-83
Identities = 105/287 (36%), Positives = 159/287 (55%)
Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQ 558
E+D ++C+R SYR LPK++ P + RT L EVLND WVS S SED +F +K Q
Sbjct: 541 EIDYASCKRLGSSYRALPKSFQQPRCTGRTPLCKEVLNDTWVSFPSWSEDSTFVSSKKTQ 600
Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEK-INNNTIKTDGPIRVEDHF----TA 613
YEE ++RCED+RFELD++LE+ N+ T RV E ++K I+ + + R+++
Sbjct: 601 YEEHIYRCEDERFELDVVLET-NLATIRVLEAVQKRISRMSAEEQAKFRLDNTIGGSSEV 659
Query: 614 LNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSK 673
++ + I+R+YGD D++D L+ N ++++P++L RLK K+EEW + FNK+W E K
Sbjct: 660 IHRKAIQRIYGDKAPDIIDGLKTNPAVSVPIVLKRLKIKEEEWREAQRGFNKIWREQNEK 719
Query: 674 NYHKSLDHRSFYFKQQDSKSLGAKAL-SAXXXXXXXXXXXXDDVLLAIAAGNRRSIVPHL 732
Y KSLDH+ FKQ D+K +K L + + A+ +G PH+
Sbjct: 720 YYLKSLDHQGINFKQNDTKVFRSKTLLNEIETLYDERQEQASEDNAAVPSG------PHM 773
Query: 733 EFEYSDPDIHEDLYQLIKYSCGEMCTTEQLDK--VMKIWTTFLEPML 777
Y D I ED LI + + DK + +I F+ ML
Sbjct: 774 TLMYEDSQILEDAAALIIHHVKRQSGIHKDDKYKIKQIIYHFIPDML 820
Score = 241 (89.9 bits), Expect = 6.4e-83, Sum P(4) = 6.4e-83
Identities = 46/80 (57%), Positives = 61/80 (76%)
Query: 41 QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDL 100
Q+L DAL+YL VK F ++ + Y+DFL++MK+FK+Q IDT GVI+RV +LFKGH DL
Sbjct: 113 QRLKVEDALSYLDQVKLQFGNQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDL 172
Query: 101 ILGFNTFLPKGYEITLPLED 120
I+GFNTFLP GY+I + D
Sbjct: 173 IMGFNTFLPPGYKIEVQTND 192
Score = 197 (74.4 bits), Expect = 6.4e-83, Sum P(4) = 6.4e-83
Identities = 51/132 (38%), Positives = 75/132 (56%)
Query: 117 PLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKS-------- 168
PL++ QP VEF AIN+VNKIK RFQG VYKSFL+IL+ Y+KE ++
Sbjct: 292 PLQNNQP-----VEFNHAINYVNKIKNRFQGQPEVYKSFLEILHTYQKEQRNAKEAGGNY 346
Query: 169 ---ITE--VYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILR-DRSSAMP 222
+TE VY +V LF++ DLL EF FLPD++ + + + + +R D
Sbjct: 347 TPTLTEQQVYAQVAQLFKNQEDLLSEFGQFLPDANSSVLLSKTTAEKAEAVRIDHGG--- 403
Query: 223 TARQVHVDKKER 234
T ++ ++ K+R
Sbjct: 404 TVKRPQLNNKQR 415
Score = 127 (49.8 bits), Expect = 6.4e-83, Sum P(4) = 6.4e-83
Identities = 29/68 (42%), Positives = 39/68 (57%)
Query: 344 AMKSMFSQELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDL 401
A K E F EKV+ LR Y FLRCL ++ +E+I+R+EL LV LG++P+L
Sbjct: 451 ASKLGIGAESLFFEKVRKALRSSEAYDNFLRCLVIFNQEVISRAELVQLVLPFLGKFPEL 510
Query: 402 MDGFNGFL 409
F FL
Sbjct: 511 FTWFKNFL 518
Score = 124 (48.7 bits), Expect = 1.0e-54, Sum P(3) = 1.0e-54
Identities = 22/67 (32%), Positives = 40/67 (59%)
Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
++ E+A+++++++K +F VY FLDI+ ++ ++ V V LF+ HPDL+
Sbjct: 115 LKVEDALSYLDQVKLQFGNQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIM 174
Query: 189 EFTHFLP 195
F FLP
Sbjct: 175 GFNTFLP 181
Score = 95 (38.5 bits), Expect = 1.1e-51, Sum P(3) = 1.1e-51
Identities = 29/82 (35%), Positives = 41/82 (50%)
Query: 41 QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDF-KAQR-IDTAG-----------VI 87
Q + N A+ Y+ +K+ FQ + E Y FLE++ + K QR AG V
Sbjct: 297 QPVEFNHAINYVNKIKNRFQGQPEVYKSFLEILHTYQKEQRNAKEAGGNYTPTLTEQQVY 356
Query: 88 ARVKELFKGHRDLILGFNTFLP 109
A+V +LFK DL+ F FLP
Sbjct: 357 AQVAQLFKNQEDLLSEFGQFLP 378
Score = 69 (29.3 bits), Expect = 1.5e-40, Sum P(2) = 1.5e-40
Identities = 22/75 (29%), Positives = 37/75 (49%)
Query: 353 LSFCEKVKDKLRDD---YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFL 409
LS+ ++VK + + Y +FL + + + I + S V L +PDL+ GFN FL
Sbjct: 121 LSYLDQVKLQFGNQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIMGFNTFL 180
Query: 410 ARCEKSEELLADVMS 424
K E D+++
Sbjct: 181 PPGYKIEVQTNDLVN 195
Score = 68 (29.0 bits), Expect = 8.8e-61, Sum P(3) = 8.8e-61
Identities = 27/114 (23%), Positives = 49/114 (42%)
Query: 334 PVSSSYDDKNAMKSM----FSQELSFCEKVKDKLRDD---YQEFLRCLHLYTKE------ 380
P+SSS +++ F+ +++ K+K++ + Y+ FL LH Y KE
Sbjct: 282 PISSSTAGSTPLQNNQPVEFNHAINYVNKIKNRFQGQPEVYKSFLEILHTYQKEQRNAKE 341
Query: 381 -------IITRSELQSLVGDLLGRYPDLMDGFNGFLARCEKSEELLADVMSKKS 427
+T ++ + V L DL+ F FL S LL+ ++K+
Sbjct: 342 AGGNYTPTLTEQQVYAQVAQLFKNQEDLLSEFGQFLPDANSSV-LLSKTTAEKA 394
Score = 57 (25.1 bits), Expect = 2.7e-39, Sum P(2) = 2.7e-39
Identities = 32/126 (25%), Positives = 49/126 (38%)
Query: 77 KAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLEDEQPPPKKPVEFEEAIN 136
+A RID G + R +L R G G T P++ +Q K EA
Sbjct: 395 EAVRIDHGGTVKR-PQLNNKQRFNQNGCQIRRHSGPPTTPPVKKKQKFAVKDPSVAEASK 453
Query: 137 --------FVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
F K++ + + Y +FL L ++ +E S E+ Q V P+L
Sbjct: 454 LGIGAESLFFEKVRKALRSSE-AYDNFLRCLVIFNQEVISRAELVQLVLPFLGKFPELFT 512
Query: 189 EFTHFL 194
F +FL
Sbjct: 513 WFKNFL 518
Score = 52 (23.4 bits), Expect = 9.1e-39, Sum P(2) = 9.1e-39
Identities = 19/73 (26%), Positives = 29/73 (39%)
Query: 40 AQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRD 99
A KL + + V+ + E YD+FL + F + I A ++ V +
Sbjct: 451 ASKLGIGAESLFFEKVRKALRSS-EAYDNFLRCLVIFNQEVISRAELVQLVLPFLGKFPE 509
Query: 100 LILGFNTFLPKGY 112
L F FL GY
Sbjct: 510 LFTWFKNFL--GY 520
Score = 49 (22.3 bits), Expect = 2.4e-30, Sum P(4) = 2.4e-30
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 378 TKEIITRSELQSLVGDLLGRYPDLMDG 404
+ E+I R +Q + GD + PD++DG
Sbjct: 656 SSEVIHRKAIQRIYGD---KAPDIIDG 679
Score = 38 (18.4 bits), Expect = 2.3e-38, Sum P(4) = 2.3e-38
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 839 EQSSSSRAWLPNGDH 853
EQ+S A +P+G H
Sbjct: 758 EQASEDNAAVPSGPH 772
>UNIPROTKB|F1PH07 [details] [associations]
symbol:SIN3A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003822 Pfam:PF02671 PROSITE:PS51477 GO:GO:0005634
GO:GO:0006355 Gene3D:1.20.1160.11 SUPFAM:SSF47762
InterPro:IPR013194 Pfam:PF08295 SMART:SM00761
GeneTree:ENSGT00390000007239 EMBL:AAEX03016328 EMBL:AAEX03016329
Ensembl:ENSCAFT00000028626 Uniprot:F1PH07
Length = 959
Score = 473 (171.6 bits), Expect = 2.0e-81, Sum P(4) = 2.0e-81
Identities = 111/286 (38%), Positives = 162/286 (56%)
Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQ 558
E+D ++C+R SYR LPK+Y P + RT L EVLND WVS S SED +F +K Q
Sbjct: 495 EIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVSSKKTQ 554
Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEK-INNNTIKTDGPIRVEDHF--TA-- 613
YEE ++RCED+RFELD++LE+ N+ T RV E ++K ++ + + R+++ T+
Sbjct: 555 YEEHIYRCEDERFELDVVLET-NLATIRVLEAIQKKLSRLSAEEQAKFRLDNTLGGTSEV 613
Query: 614 LNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSK 673
++ + ++R+Y D D++D LRKN S+A+P++L RLK K+EEW + FNKVW E K
Sbjct: 614 IHRKALQRIYADKAADIIDGLRKNPSIAVPIVLKRLKMKEEEWREAQRGFNKVWREQNEK 673
Query: 674 NYHKSLDHRSFYFKQQDSKSLGAKALSAXXXXXXXXXXXXDDVLLAIAAGNRRSIVPHLE 733
Y KSLDH+ FKQ D+K L +K+L + AG I PHL
Sbjct: 674 YYLKSLDHQGINFKQNDTKVLRSKSL---LNEIESIYDERQEQATEDNAGV--PIGPHLS 728
Query: 734 FEYSDPDIHEDLYQLIKYSCGEMCTTEQLDK--VMKIWTTFLEPML 777
Y D I ED LI + ++ DK + +I F+ +L
Sbjct: 729 LAYEDKQILEDAAALIIHHVKRQTGIQKEDKYKIKQIMHHFIPDLL 774
Score = 240 (89.5 bits), Expect = 2.0e-81, Sum P(4) = 2.0e-81
Identities = 46/80 (57%), Positives = 60/80 (75%)
Query: 41 QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDL 100
Q+L DAL+YL VK F + + Y+DFL++MK+FK+Q IDT GVI+RV +LFKGH DL
Sbjct: 119 QRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDL 178
Query: 101 ILGFNTFLPKGYEITLPLED 120
I+GFNTFLP GY+I + D
Sbjct: 179 IMGFNTFLPPGYKIEVQTND 198
Score = 141 (54.7 bits), Expect = 2.0e-81, Sum P(4) = 2.0e-81
Identities = 28/57 (49%), Positives = 41/57 (71%)
Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDH 183
+PVEF AIN+VNKIK RFQG +YK+FL+IL+ Y+ +K+ E +V+++ DH
Sbjct: 300 QPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQLLSKTTAE---KVDSVRNDH 353
Score = 133 (51.9 bits), Expect = 2.0e-81, Sum P(4) = 2.0e-81
Identities = 28/69 (40%), Positives = 43/69 (62%)
Query: 343 NAMKSMFSQELSFCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPD 400
+A K E F +KV+ LR + Y+ FLRCL ++ +E+I+R+EL LV LG++P+
Sbjct: 404 DASKHGVGTESLFFDKVRKALRSAEAYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPE 463
Query: 401 LMDGFNGFL 409
L + F FL
Sbjct: 464 LFNWFKNFL 472
Score = 125 (49.1 bits), Expect = 6.3e-59, Sum P(3) = 6.3e-59
Identities = 25/79 (31%), Positives = 45/79 (56%)
Query: 117 PLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEV 176
P++ +Q + VE +A+++++++K +F VY FLDI+ ++ ++ V V
Sbjct: 111 PVQGQQQFQRLKVE--DALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRV 168
Query: 177 EALFQDHPDLLEEFTHFLP 195
LF+ HPDL+ F FLP
Sbjct: 169 SQLFKGHPDLIMGFNTFLP 187
Score = 72 (30.4 bits), Expect = 5.3e-44, Sum P(2) = 5.3e-44
Identities = 26/105 (24%), Positives = 45/105 (42%)
Query: 334 PVSSSYDDKNAMKSMFSQELSFCEKVKDKLRDD---YQEFLRCLHLYTKEIITRSELQSL 390
PV+ + + LS+ ++VK + Y +FL + + + I + S
Sbjct: 108 PVAPVQGQQQFQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISR 167
Query: 391 VGDLLGRYPDLMDGFNGFLARCEKSEELLADVMSKKSLWNEGRIP 435
V L +PDL+ GFN FL K E D+++ + +IP
Sbjct: 168 VSQLFKGHPDLIMGFNTFLPPGYKIEVQTNDMVNVTTPGQVHQIP 212
Score = 61 (26.5 bits), Expect = 3.1e-52, Sum P(3) = 3.1e-52
Identities = 14/51 (27%), Positives = 27/51 (52%)
Query: 41 QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVK 91
Q + N A+ Y+ +K+ FQ + + Y FLE++ ++ TA + V+
Sbjct: 300 QPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQLLSKTTAEKVDSVR 350
Score = 60 (26.2 bits), Expect = 2.5e-63, Sum P(3) = 2.5e-63
Identities = 16/58 (27%), Positives = 29/58 (50%)
Query: 137 FVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFL 194
F +K++ + + Y++FL L ++ +E S E+ Q V P+L F +FL
Sbjct: 416 FFDKVRKALRSAE-AYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPELFNWFKNFL 472
Score = 52 (23.4 bits), Expect = 1.8e-62, Sum P(3) = 1.8e-62
Identities = 10/32 (31%), Positives = 19/32 (59%)
Query: 349 FSQELSFCEKVKDKLR---DDYQEFLRCLHLY 377
F+ +++ K+K++ + D Y+ FL LH Y
Sbjct: 304 FNHAINYVNKIKNRFQGQPDIYKAFLEILHTY 335
Score = 52 (23.4 bits), Expect = 6.7e-42, Sum P(2) = 6.7e-42
Identities = 16/56 (28%), Positives = 26/56 (46%)
Query: 64 EKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLE 119
E Y++FL + F + I A ++ V +L F FL GY+ ++ LE
Sbjct: 428 EAYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPELFNWFKNFL--GYKESVHLE 481
Score = 41 (19.5 bits), Expect = 6.6e-25, Sum P(3) = 6.6e-25
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 378 TKEIITRSELQSLVGDLLGRYPDLMDG 404
T E+I R LQ + D + D++DG
Sbjct: 610 TSEVIHRKALQRIYAD---KAADIIDG 633
Score = 37 (18.1 bits), Expect = 1.5e-70, Sum P(4) = 1.5e-70
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 166 NKSITEVYQEVEALFQDHPDLLEEFTHFL 194
N +I V +++ FQ PD+ + F L
Sbjct: 305 NHAINYV-NKIKNRFQGQPDIYKAFLEIL 332
Score = 37 (18.1 bits), Expect = 1.7e-24, Sum P(3) = 1.7e-24
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 399 PDLMDGFNGFLARCEKSEELLADV 422
PDL+ G L+ E+ EE DV
Sbjct: 771 PDLLFAQRGDLSDVEEEEEEEMDV 794
>UNIPROTKB|E1BGW5 [details] [associations]
symbol:LOC520505 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0048738 "cardiac muscle tissue development"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0030849 "autosome" evidence=IEA]
[GO:0007519 "skeletal muscle tissue development" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0001741 "XY body" evidence=IEA] [GO:0000806 "Y chromosome"
evidence=IEA] [GO:0000805 "X chromosome" evidence=IEA]
InterPro:IPR003822 Pfam:PF02671 PROSITE:PS51477 GO:GO:0005634
GO:GO:0005737 GO:GO:0003714 GO:GO:0045892 GO:GO:0003682
GO:GO:0048738 GO:GO:0001741 GO:GO:0007519 GO:GO:0000805
GO:GO:0000806 Gene3D:1.20.1160.11 SUPFAM:SSF47762 GO:GO:0030849
InterPro:IPR013194 Pfam:PF08295 SMART:SM00761
GeneTree:ENSGT00390000007239 OMA:DVYSLFF EMBL:DAAA02019084
IPI:IPI00690642 Ensembl:ENSBTAT00000036414 Uniprot:E1BGW5
Length = 1144
Score = 469 (170.2 bits), Expect = 4.3e-79, Sum P(5) = 4.3e-79
Identities = 109/260 (41%), Positives = 150/260 (57%)
Query: 498 QELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKN 557
+E+D ++C+R SYR LPK Y P S RT + EVLND WVS S SED +F +K
Sbjct: 405 REIDYASCKRIGSSYRALPKTYQQPKCSGRTAICKEVLNDTWVSFPSWSEDSTFVSSKKT 464
Query: 558 QYEESLFRCEDDRFELDMLLESVNVTTKRV-EELLEKINNNTIKTDGPIRVEDHF--TA- 613
YEE L RCED+RFELD++LE+ N+ T RV E + +K++ + R++D T+
Sbjct: 465 PYEEQLHRCEDERFELDVVLET-NLATIRVLESVQKKLSRMAPEDQEKFRLDDCLGGTSE 523
Query: 614 -LNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYS 672
+ R I R+YGD ++++ L+KN A+PV+L RLK K+EEW + FNK+W E Y
Sbjct: 524 VIQRRAIHRIYGDKAPEIIESLKKNPVTAVPVVLKRLKAKEEEWREAQQGFNKIWREQYE 583
Query: 673 KNYHKSLDHRSFYFKQQDSKSLGAKALSAXXXXXXXXXXXXDDVLLAIAAGNRR-SIVPH 731
K Y KSLDH++ FKQ D+K+L +K+L D+ + G S PH
Sbjct: 584 KAYLKSLDHQAVNFKQNDTKALRSKSL------LNEIESVYDEHQEQHSEGRSAPSSEPH 637
Query: 732 LEFEYSDPDIHEDLYQLIKY 751
L F Y D I ED LI Y
Sbjct: 638 LIFVYEDRQILEDAAALISY 657
Score = 202 (76.2 bits), Expect = 4.3e-79, Sum P(5) = 4.3e-79
Identities = 41/71 (57%), Positives = 48/71 (67%)
Query: 47 DALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNT 106
DAL YL VK F Y+ FLE+MK+FK+Q IDT GVI RV +LF H DLI+GFN
Sbjct: 39 DALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRVSQLFHEHPDLIVGFNA 98
Query: 107 FLPKGYEITLP 117
FLP GY I +P
Sbjct: 99 FLPLGYRIDIP 109
Score = 168 (64.2 bits), Expect = 4.3e-79, Sum P(5) = 4.3e-79
Identities = 45/111 (40%), Positives = 60/111 (54%)
Query: 115 TLPLEDEQPPPKKP--VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSIT-- 170
TL ED+ P + VEF AI++VNKIKTRF +Y+SFL+IL+ Y+KE S
Sbjct: 162 TLYKEDKPQVPLESDSVEFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLSTKGR 221
Query: 171 --------EVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSI 213
EV+ EV LF+ DLL EF FLP++ + P NS+
Sbjct: 222 PFRGMSEEEVFTEVANLFRGQEDLLSEFGQFLPEAKRSLFTGNGPCEMNSV 272
Score = 138 (53.6 bits), Expect = 4.2e-59, Sum P(4) = 4.2e-59
Identities = 25/70 (35%), Positives = 41/70 (58%)
Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
K PV E+A+ +++++K RF D Y FL+I+ ++ ++ V + V LF +HPD
Sbjct: 32 KLPVHVEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRVSQLFHEHPD 91
Query: 186 LLEEFTHFLP 195
L+ F FLP
Sbjct: 92 LIVGFNAFLP 101
Score = 137 (53.3 bits), Expect = 4.3e-79, Sum P(5) = 4.3e-79
Identities = 29/67 (43%), Positives = 42/67 (62%)
Query: 351 QELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGF 408
QE SF +KV+ L+ Y+ FLRC+ L+ +E+++ SEL LVG LG++P+L F F
Sbjct: 324 QEFSFFDKVRRVLKSQEVYENFLRCIALFNQELVSGSELLQLVGPFLGKFPELFAQFKSF 383
Query: 409 LARCEKS 415
L E S
Sbjct: 384 LGVKELS 390
Score = 104 (41.7 bits), Expect = 1.4e-55, Sum P(4) = 1.4e-55
Identities = 24/75 (32%), Positives = 39/75 (52%)
Query: 46 NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAG----------VIARVKELFK 95
N+A++Y+ +K F D E Y FLE++ ++ +++ T G V V LF+
Sbjct: 181 NNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLSTKGRPFRGMSEEEVFTEVANLFR 240
Query: 96 GHRDLILGFNTFLPK 110
G DL+ F FLP+
Sbjct: 241 GQEDLLSEFGQFLPE 255
Score = 69 (29.3 bits), Expect = 1.1e-58, Sum P(4) = 1.1e-58
Identities = 19/75 (25%), Positives = 36/75 (48%)
Query: 133 EAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTH 192
+ +F +K++ R VY++FL + ++ +E S +E+ Q V P+L +F
Sbjct: 324 QEFSFFDKVR-RVLKSQEVYENFLRCIALFNQELVSGSELLQLVGPFLGKFPELFAQFKS 382
Query: 193 FLPDSSGAASIHYVP 207
FL G + + P
Sbjct: 383 FL----GVKELSFAP 393
Score = 69 (29.3 bits), Expect = 1.1e-58, Sum P(4) = 1.1e-58
Identities = 22/80 (27%), Positives = 36/80 (45%)
Query: 349 FSQELSFCEKVKDKLRDD---YQEFLRCLHLYTKEIIT----------RSELQSLVGDLL 395
F+ +S+ K+K + D Y+ FL LH Y KE ++ E+ + V +L
Sbjct: 180 FNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLSTKGRPFRGMSEEEVFTEVANLF 239
Query: 396 GRYPDLMDGFNGFLARCEKS 415
DL+ F FL ++S
Sbjct: 240 RGQEDLLSEFGQFLPEAKRS 259
Score = 68 (29.0 bits), Expect = 6.7e-42, Sum P(3) = 6.7e-42
Identities = 18/60 (30%), Positives = 29/60 (48%)
Query: 353 LSFCEKVKDKLRDD---YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFL 409
L++ ++VK + D Y FL + + + I + V L +PDL+ GFN FL
Sbjct: 41 LTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRVSQLFHEHPDLIVGFNAFL 100
Score = 54 (24.1 bits), Expect = 3.4e-12, Sum P(2) = 3.4e-12
Identities = 18/69 (26%), Positives = 31/69 (44%)
Query: 110 KGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLD-ILNMYRKENKS 168
KG P + QPP KP++ ++ F N F ++++ +L +YR+ K
Sbjct: 732 KGAAGEAPAPEPQPPQHKPLDDVYSLFFANNNWYFFL---RLHQTLCSRLLKIYRQAQKQ 788
Query: 169 ITEVYQEVE 177
+ E E E
Sbjct: 789 LLEYRTEKE 797
Score = 45 (20.9 bits), Expect = 1.7e-39, Sum P(3) = 1.7e-39
Identities = 16/80 (20%), Positives = 33/80 (41%)
Query: 42 KLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLI 101
K T ++ V+ + + + E Y++FL + F + + + ++ V +L
Sbjct: 319 KYGTLQEFSFFDKVRRVLKSQ-EVYENFLRCIALFNQELVSGSELLQLVGPFLGKFPELF 377
Query: 102 LGFNTFLP-KGYEITLPLED 120
F +FL K P+ D
Sbjct: 378 AQFKSFLGVKELSFAPPMND 397
Score = 37 (18.1 bits), Expect = 4.3e-79, Sum P(5) = 4.3e-79
Identities = 9/32 (28%), Positives = 17/32 (53%)
Query: 980 KILRYNAESVKQFKIEREEGELSPNGDFEEDN 1011
KI R + + +++ E+E +L G E+ N
Sbjct: 780 KIYRQAQKQLLEYRTEKEREKLLCEGRREKGN 811
>ZFIN|ZDB-GENE-030131-8264 [details] [associations]
symbol:sin3b "SIN3 homolog B, transcription
regulator (yeast)" species:7955 "Danio rerio" [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR003822 Pfam:PF02671
PROSITE:PS51477 ZFIN:ZDB-GENE-030131-8264 GO:GO:0005634
GO:GO:0006355 EMBL:BX004884 Gene3D:1.20.1160.11 SUPFAM:SSF47762
eggNOG:COG5602 InterPro:IPR013194 Pfam:PF08295 SMART:SM00761
HOVERGEN:HBG060425 GeneTree:ENSGT00390000007239 CTD:23309
HOGENOM:HOG000230688 OMA:DVYSLFF OrthoDB:EOG4ZGPBH EMBL:BC171496
EMBL:BC171498 IPI:IPI00501556 RefSeq:NP_001038410.1
UniGene:Dr.74013 SMR:Q1LYM8 STRING:Q1LYM8
Ensembl:ENSDART00000090371 GeneID:560837 KEGG:dre:560837
InParanoid:Q1LYM8 NextBio:20883638 Uniprot:Q1LYM8
Length = 1196
Score = 466 (169.1 bits), Expect = 2.8e-78, Sum P(4) = 2.8e-78
Identities = 108/286 (37%), Positives = 159/286 (55%)
Query: 490 DKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDY 549
D+Y+ +E+D ++C+R SYR LPK Y P S RT + EVLND WVS S SED
Sbjct: 423 DRYMEGGGREVDYASCKRLGSSYRALPKTYQQPKCSGRTAICKEVLNDTWVSFPSWSEDS 482
Query: 550 SFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRV-EELLEKINNNTIKTDGPIRVE 608
+F +K YEE L RCED+RFELD++LE+ N+ T RV E + +K++ +++ R++
Sbjct: 483 TFVSSKKTPYEEQLHRCEDERFELDVVLET-NLATIRVLESVQKKLSRLSLEDQERFRLD 541
Query: 609 DHF--TA--LNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFN 664
D T+ + R + R+YGD ++++ L+++ + A+PV+L RLK K+EEW + FN
Sbjct: 542 DCLGGTSEVIQRRAVYRIYGDKAPEIIEGLKRSPATAVPVVLKRLKAKEEEWREAQQGFN 601
Query: 665 KVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKAL--SAXXXXXXXXXXXXDDVLLAIAA 722
K+W E Y K Y KSLDH+ FKQ D K+L +K+L ++ +
Sbjct: 602 KIWREQYEKAYLKSLDHQGVNFKQNDMKALRSKSLLNEIESIYDERQEQSTEEGSVGQQG 661
Query: 723 GNRRSIV----PHLEFEYSDPDIHEDLYQLIKYSCGEMCTTEQLDK 764
+ S PH+ F Y D I ED LI Y T + DK
Sbjct: 662 RDGTSTASTSEPHMIFNYEDKQILEDAASLIIYHVKRQPTIHKDDK 707
Score = 221 (82.9 bits), Expect = 2.8e-78, Sum P(4) = 2.8e-78
Identities = 44/77 (57%), Positives = 54/77 (70%)
Query: 41 QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDL 100
QKL DAL+YL VK F + Y+ FL++MK+FK+Q IDT GVI RV +LF GH DL
Sbjct: 34 QKLKVEDALSYLDQVKIRFGNDPGIYNKFLDIMKEFKSQSIDTPGVINRVSQLFHGHPDL 93
Query: 101 ILGFNTFLPKGYEITLP 117
+LGFN FLP GY I +P
Sbjct: 94 VLGFNAFLPPGYRIEIP 110
Score = 159 (61.0 bits), Expect = 2.8e-78, Sum P(4) = 2.8e-78
Identities = 40/106 (37%), Positives = 56/106 (52%)
Query: 108 LPKGYEITLPLEDEQPPPKK---PVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRK 164
LP + P PP PVEF+ AI++VNKIK RF + Y++FL+IL+ Y+K
Sbjct: 180 LPNRESQSQPAATSVSPPTSEPSPVEFDSAISYVNKIKNRFLDNPETYRAFLEILHTYQK 239
Query: 165 ENKSITE-------------VYQEVEALFQDHPDLLEEFTHFLPDS 197
E + E V+ +V +LF+ DLL EF FLPD+
Sbjct: 240 EQLEVKESRGRSTGGMTEDEVFSKVASLFKGQEDLLAEFGQFLPDA 285
Score = 130 (50.8 bits), Expect = 1.1e-56, Sum P(3) = 1.1e-56
Identities = 27/101 (26%), Positives = 50/101 (49%)
Query: 95 KGHRDLILGFNTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKS 154
+ H N K Y + ++ + + ++ E+A+++++++K RF D +Y
Sbjct: 5 QAHSSTAKQINQIQDKAYVVQKQVQQQH---FQKLKVEDALSYLDQVKIRFGNDPGIYNK 61
Query: 155 FLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLP 195
FLDI+ ++ ++ V V LF HPDL+ F FLP
Sbjct: 62 FLDIMKEFKSQSIDTPGVINRVSQLFHGHPDLVLGFNAFLP 102
Score = 121 (47.7 bits), Expect = 2.8e-78, Sum P(4) = 2.8e-78
Identities = 25/67 (37%), Positives = 41/67 (61%)
Query: 351 QELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGF 408
+E +F +KV+ L+ Y+ FLRC+ L+ +E+++ +EL LV LG++P+L F F
Sbjct: 349 REFTFFDKVRRLLKSQEVYENFLRCIALFNQEVVSGAELLQLVTPFLGKFPELYTQFKSF 408
Query: 409 LARCEKS 415
L E S
Sbjct: 409 LGDKELS 415
Score = 102 (41.0 bits), Expect = 9.5e-54, Sum P(3) = 9.5e-54
Identities = 34/112 (30%), Positives = 54/112 (48%)
Query: 46 NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRID--------TAG-----VIARVKE 92
+ A++Y+ +K+ F D E Y FLE++ ++ ++++ T G V ++V
Sbjct: 207 DSAISYVNKIKNRFLDNPETYRAFLEILHTYQKEQLEVKESRGRSTGGMTEDEVFSKVAS 266
Query: 93 LFKGHRDLILGFNTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTR 144
LFKG DL+ F FLP + L P K VE EE +N K + R
Sbjct: 267 LFKGQEDLLAEFGQFLP---DAKRSLFTGGSLPLKKVE-EEELNKQTKKRPR 314
Score = 75 (31.5 bits), Expect = 4.7e-43, Sum P(2) = 4.7e-43
Identities = 21/78 (26%), Positives = 36/78 (46%)
Query: 335 VSSSYDDKNAMKSMFSQELSFCEKVKDKLRDD---YQEFLRCLHLYTKEIITRSELQSLV 391
V ++ K LS+ ++VK + +D Y +FL + + + I + + V
Sbjct: 24 VQKQVQQQHFQKLKVEDALSYLDQVKIRFGNDPGIYNKFLDIMKEFKSQSIDTPGVINRV 83
Query: 392 GDLLGRYPDLMDGFNGFL 409
L +PDL+ GFN FL
Sbjct: 84 SQLFHGHPDLVLGFNAFL 101
Score = 73 (30.8 bits), Expect = 3.6e-61, Sum P(3) = 3.6e-61
Identities = 27/96 (28%), Positives = 45/96 (46%)
Query: 349 FSQELSFCEKVKDKLRDD---YQEFLRCLHLYTKEI--ITRSELQSLVG----DLLGRYP 399
F +S+ K+K++ D+ Y+ FL LH Y KE + S +S G ++ +
Sbjct: 206 FDSAISYVNKIKNRFLDNPETYRAFLEILHTYQKEQLEVKESRGRSTGGMTEDEVFSKVA 265
Query: 400 DLMDGFNGFLARCEKSEELLADVMSKKSLWNEGRIP 435
L G LA + + L D +K+SL+ G +P
Sbjct: 266 SLFKGQEDLLA---EFGQFLPD--AKRSLFTGGSLP 296
Score = 70 (29.7 bits), Expect = 7.4e-61, Sum P(3) = 7.4e-61
Identities = 18/60 (30%), Positives = 30/60 (50%)
Query: 137 FVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLPD 196
F +K++ R VY++FL + ++ +E S E+ Q V P+L +F FL D
Sbjct: 353 FFDKVR-RLLKSQEVYENFLRCIALFNQEVVSGAELLQLVTPFLGKFPELYTQFKSFLGD 411
Score = 49 (22.3 bits), Expect = 6.5e-33, Sum P(4) = 6.5e-33
Identities = 11/41 (26%), Positives = 21/41 (51%)
Query: 535 LNDHWVSVTSGSEDYSFKH---MRKNQYEESLFRCEDDRFE 572
LN H + SEDY ++ ++ + + + R + +RFE
Sbjct: 1093 LNTHKMVFVMNSEDYMYRRGALVKARRSQHRVARAQHERFE 1133
Score = 46 (21.3 bits), Expect = 2.4e-13, Sum P(2) = 2.4e-13
Identities = 11/25 (44%), Positives = 13/25 (52%)
Query: 826 SNPSRNGDESIPPEQSSSSRAWLPN 850
++P S PPEQSS LPN
Sbjct: 158 TSPESIASSSGPPEQSSKLSLPLPN 182
Score = 40 (19.1 bits), Expect = 2.2e-39, Sum P(2) = 2.2e-39
Identities = 11/46 (23%), Positives = 21/46 (45%)
Query: 63 REKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFL 108
+E Y++FL + F + + A ++ V +L F +FL
Sbjct: 364 QEVYENFLRCIALFNQEVVSGAELLQLVTPFLGKFPELYTQFKSFL 409
>FB|FBgn0022764 [details] [associations]
symbol:Sin3A "Sin3A" species:7227 "Drosophila melanogaster"
[GO:0005634 "nucleus" evidence=ISS;IDA;NAS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEP;IMP;TAS] [GO:0007422 "peripheral
nervous system development" evidence=TAS] [GO:0000785 "chromatin"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IMP] [GO:0003712 "transcription cofactor activity"
evidence=NAS] [GO:0016580 "Sin3 complex" evidence=NAS] [GO:0000791
"euchromatin" evidence=TAS] [GO:0046982 "protein heterodimerization
activity" evidence=IPI] [GO:0048813 "dendrite morphogenesis"
evidence=IMP] [GO:0007517 "muscle organ development" evidence=IMP]
[GO:0048666 "neuron development" evidence=IMP] [GO:0070822
"Sin3-type complex" evidence=IDA] [GO:0017053 "transcriptional
repressor complex" evidence=IDA] [GO:0005700 "polytene chromosome"
evidence=IDA] [GO:0035206 "regulation of hemocyte proliferation"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] InterPro:IPR003822 Pfam:PF02671 PROSITE:PS51477
EMBL:AE013599 GO:GO:0007346 GO:GO:0017053 GO:GO:0045892
GO:GO:0007422 GO:GO:0048813 GO:GO:0007517 GO:GO:0005700
GO:GO:0035206 GO:GO:0016580 GO:GO:0000791 Gene3D:1.20.1160.11
SUPFAM:SSF47762 KO:K11644 InterPro:IPR013194 Pfam:PF08295
SMART:SM00761 CTD:25942 ChiTaRS:SIN3A GeneTree:ENSGT00390000007239
UniGene:Dm.4374 GeneID:36382 KEGG:dme:Dmel_CG8815
FlyBase:FBgn0022764 GenomeRNAi:36382 NextBio:798235 EMBL:BT016112
RefSeq:NP_001188912.1 RefSeq:NP_725187.1 RefSeq:NP_725188.1
SMR:Q5U0Y0 IntAct:Q5U0Y0 STRING:Q5U0Y0 EnsemblMetazoa:FBtr0087887
EnsemblMetazoa:FBtr0087890 EnsemblMetazoa:FBtr0303565
UCSC:CG8815-RB InParanoid:Q5U0Y0 Uniprot:Q5U0Y0
Length = 2062
Score = 432 (157.1 bits), Expect = 2.5e-72, Sum P(5) = 2.5e-72
Identities = 106/307 (34%), Positives = 167/307 (54%)
Query: 494 AKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSV-TSGSEDYSFK 552
A+ +Q++DLS+C+R SY LP++ + S RT L EVLND WVS T SED +F
Sbjct: 1022 AEYVQDVDLSSCKRLGASYCALPQSTVPKKCSGRTALCREVLNDKWVSFPTWASEDSTFV 1081
Query: 553 HMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRV-EELLEKINNNTIKTDGPIRVEDHF 611
RK Q+EE+++R ED+RFELD+++E VN T RV E L +K++ + + ++DH
Sbjct: 1082 TSRKTQFEETIYRTEDERFELDLVIE-VNSATIRVLENLQKKMSRMSTEELSKFHLDDHL 1140
Query: 612 --TA--LNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVW 667
T+ ++ R I R+YGD +++ ++KN +A+P++L RLK K+EEW + FNK W
Sbjct: 1141 GGTSQTIHQRAIHRIYGDKSGEIITGMKKNPFVAVPIVLKRLKVKEEEWREAQKTFNKQW 1200
Query: 668 AEIYSKNYHKSLDHRSFYFKQQDSKSLGAKAL-SAXXXXXXXXXXXXDDVLLAIAAGNRR 726
E K Y KSLDH++ FK D K+L +K+L + DD +
Sbjct: 1201 REQNEKYYLKSLDHQAINFKPNDMKALRSKSLFNEIETLYDERHDQEDDAMEPFG----- 1255
Query: 727 SIVPHLEFEYSDPDIHEDLYQLIKYSCGEMCTTEQLDK--VMKIWTTFLEPMLGVPSRPQ 784
PHL Y D I +D L+ + ++ +K + +I F+ + P +P
Sbjct: 1256 ---PHLVLPYKDKTILDDAANLLIHHVKRQTGIQKQEKQKIKQIIRQFVPDLFFAPRQPL 1312
Query: 785 GAEDTED 791
++ +D
Sbjct: 1313 SDDERDD 1319
Score = 210 (79.0 bits), Expect = 2.5e-72, Sum P(5) = 2.5e-72
Identities = 43/92 (46%), Positives = 57/92 (61%)
Query: 25 PSGQTQVVXXXXXXXAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTA 84
P G T +L DAL+YL VK + D+ + Y++FL++MK+FK+ IDT
Sbjct: 252 PVGGTTPPQGQSGNATPRLKVEDALSYLDQVKYQYADQPQIYNNFLDIMKEFKSHCIDTP 311
Query: 85 GVIARVKELFKGHRDLILGFNTFLPKGYEITL 116
GVI RV LFKGH +LI GFN FLP GY+I +
Sbjct: 312 GVIERVSTLFKGHTELIYGFNMFLPPGYKIEI 343
Score = 169 (64.5 bits), Expect = 2.5e-72, Sum P(5) = 2.5e-72
Identities = 47/111 (42%), Positives = 59/111 (53%)
Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENK-----SIT--------EVY 173
+PVEF AI +VNKIK RFQ YK FL+IL+ Y++E K S+ EVY
Sbjct: 565 QPVEFNHAITYVNKIKNRFQNQPAKYKKFLEILHDYQREQKVMKEGSLNQGKMLTEQEVY 624
Query: 174 QEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTA 224
+V LF DLL EF FLPD++ S Y+ S S+ D PTA
Sbjct: 625 TQVAKLFGQDEDLLREFGQFLPDATNHQSGQYM-SKSASVHNDHGKR-PTA 673
Score = 121 (47.7 bits), Expect = 2.5e-72, Sum P(5) = 2.5e-72
Identities = 25/60 (41%), Positives = 38/60 (63%)
Query: 352 ELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFL 409
+ +F +KV+ LR Y FLRCL L+ +EI++++EL LV L ++PDL+ F FL
Sbjct: 921 DAAFFDKVRKALRSPEVYDNFLRCLTLFNQEIVSKTELLGLVSPFLMKFPDLLRWFTDFL 980
Score = 107 (42.7 bits), Expect = 1.1e-48, Sum P(4) = 1.1e-48
Identities = 20/81 (24%), Positives = 43/81 (53%)
Query: 115 TLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQ 174
T P + + ++ E+A+++++++K ++ +Y +FLDI+ ++ V +
Sbjct: 256 TTPPQGQSGNATPRLKVEDALSYLDQVKYQYADQPQIYNNFLDIMKEFKSHCIDTPGVIE 315
Query: 175 EVEALFQDHPDLLEEFTHFLP 195
V LF+ H +L+ F FLP
Sbjct: 316 RVSTLFKGHTELIYGFNMFLP 336
Score = 89 (36.4 bits), Expect = 4.5e-56, Sum P(4) = 4.5e-56
Identities = 30/91 (32%), Positives = 42/91 (46%)
Query: 123 PPPKKP------VEFEEAIN--------FVNKIKTRFQGDDHVYKSFLDILNMYRKENKS 168
PP K+P V F EA + F +K++ + + VY +FL L ++ +E S
Sbjct: 896 PPAKRPKPYCRDVSFSEASSKCTISDAAFFDKVRKALRSPE-VYDNFLRCLTLFNQEIVS 954
Query: 169 ITEVYQEVEALFQDHPDLLEEFTHFLPDSSG 199
TE+ V PDLL FT FL SG
Sbjct: 955 KTELLGLVSPFLMKFPDLLRWFTDFLGPPSG 985
Score = 89 (36.4 bits), Expect = 7.7e-47, Sum P(4) = 7.7e-47
Identities = 25/82 (30%), Positives = 41/82 (50%)
Query: 41 QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDF-KAQRIDTAG------------VI 87
Q + N A+ Y+ +K+ FQ++ KY FLE++ D+ + Q++ G V
Sbjct: 565 QPVEFNHAITYVNKIKNRFQNQPAKYKKFLEILHDYQREQKVMKEGSLNQGKMLTEQEVY 624
Query: 88 ARVKELFKGHRDLILGFNTFLP 109
+V +LF DL+ F FLP
Sbjct: 625 TQVAKLFGQDEDLLREFGQFLP 646
Score = 70 (29.7 bits), Expect = 4.3e-54, Sum P(4) = 4.3e-54
Identities = 27/105 (25%), Positives = 49/105 (46%)
Query: 349 FSQELSFCEKVKDKLRDD---YQEFLRCLHLYTKE-------------IITRSELQSLVG 392
F+ +++ K+K++ ++ Y++FL LH Y +E ++T E+ + V
Sbjct: 569 FNHAITYVNKIKNRFQNQPAKYKKFLEILHDYQREQKVMKEGSLNQGKMLTEQEVYTQVA 628
Query: 393 DLLGRYPDLMDGFNGFLARCEKSEELLADVMSKK-SLWNE-GRIP 435
L G+ DL+ F FL + MSK S+ N+ G+ P
Sbjct: 629 KLFGQDEDLLREFGQFLPDATNHQS--GQYMSKSASVHNDHGKRP 671
Score = 61 (26.5 bits), Expect = 3.6e-36, Sum P(3) = 3.6e-36
Identities = 20/74 (27%), Positives = 32/74 (43%)
Query: 40 AQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRD 99
+ K T +DA A+ V+ + E YD+FL + F + + ++ V D
Sbjct: 914 SSKCTISDA-AFFDKVRKALRSP-EVYDNFLRCLTLFNQEIVSKTELLGLVSPFLMKFPD 971
Query: 100 LILGFNTFL--PKG 111
L+ F FL P G
Sbjct: 972 LLRWFTDFLGPPSG 985
Score = 52 (23.4 bits), Expect = 2.4e-34, Sum P(4) = 2.4e-34
Identities = 17/60 (28%), Positives = 27/60 (45%)
Query: 353 LSFCEKVKDKLRDD---YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFL 409
LS+ ++VK + D Y FL + + I + V L + +L+ GFN FL
Sbjct: 276 LSYLDQVKYQYADQPQIYNNFLDIMKEFKSHCIDTPGVIERVSTLFKGHTELIYGFNMFL 335
Score = 41 (19.5 bits), Expect = 2.5e-72, Sum P(5) = 2.5e-72
Identities = 12/36 (33%), Positives = 15/36 (41%)
Query: 945 GGLELRSSNEILPSSEGGECSRQNISTNGVMTEGAK 980
G E + N SE +R N ST+ V G K
Sbjct: 1338 GRTESSTRNAKSTPSESASPARSNASTSSVTPAGIK 1373
Score = 40 (19.1 bits), Expect = 5.5e-11, Sum P(2) = 5.5e-11
Identities = 9/39 (23%), Positives = 16/39 (41%)
Query: 934 AHSRPGNHIVEGGLELRSSNEILPSSEGGECSRQNISTN 972
+ S G H+ ++N ++P G S N+ N
Sbjct: 445 SQSPGGGHVHVSVTNSTAANAVVPGQPGISVSAHNVPQN 483
Score = 37 (18.1 bits), Expect = 1.8e-41, Sum P(4) = 1.8e-41
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 195 PDSSGAASIHYVPS 208
P GA +I Y+PS
Sbjct: 80 PQHGGAQTIAYLPS 93
Score = 37 (18.1 bits), Expect = 6.8e-23, Sum P(3) = 6.8e-23
Identities = 15/73 (20%), Positives = 36/73 (49%)
Query: 367 YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLARCEKSEELLADVMSKK 426
Y F ++ + ++ ++ + Q+ V LLG+ D ++ +G+ K++ + SK
Sbjct: 1898 YAHFQTYVNKWLQQHVSEQQQQNCVDWLLGKTADQINA-SGW-GSASKTKTVQQKDTSKT 1955
Query: 427 S--LWNEGRIPKS 437
++N R+ +S
Sbjct: 1956 PYRIYNRYRVVQS 1968
>SGD|S000005364 [details] [associations]
symbol:SIN3 "Component of the Sin3p-Rpd3p histone deacetylase
complex" species:4932 "Saccharomyces cerevisiae" [GO:0070210
"Rpd3L-Expanded complex" evidence=IDA] [GO:0033698 "Rpd3L complex"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0032221 "Rpd3S complex"
evidence=IDA] [GO:0061186 "negative regulation of chromatin
silencing at silent mating-type cassette" evidence=IMP] [GO:0061188
"negative regulation of chromatin silencing at rDNA" evidence=IMP]
[GO:0031939 "negative regulation of chromatin silencing at
telomere" evidence=IMP] [GO:0016479 "negative regulation of
transcription from RNA polymerase I promoter" evidence=IMP]
[GO:0000117 "regulation of transcription involved in G2/M-phase of
mitotic cell cycle" evidence=IGI] [GO:0016575 "histone
deacetylation" evidence=IMP] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0051301 "cell division"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0070822 "Sin3-type complex"
evidence=IDA] [GO:0003714 "transcription corepressor activity"
evidence=IMP;IPI] [GO:0006303 "double-strand break repair via
nonhomologous end joining" evidence=IMP] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0003713 "transcription coactivator activity"
evidence=IMP] [GO:0061408 "positive regulation of transcription
from RNA polymerase II promoter in response to heat stress"
evidence=IMP] [GO:0030174 "regulation of DNA-dependent DNA
replication initiation" evidence=IMP] [GO:0051038 "negative
regulation of transcription during meiosis" evidence=IMP]
InterPro:IPR003822 Pfam:PF02671 PROSITE:PS51477 SGD:S000005364
GO:GO:0003714 EMBL:BK006948 GO:GO:0051301 GO:GO:0006351
GO:GO:0000122 GO:GO:0003713 GO:GO:0061408 GO:GO:0033698
GO:GO:0070210 GO:GO:0006303 GO:GO:0000117 GO:GO:0016575
GO:GO:0051038 GO:GO:0030174 GO:GO:0032221 GO:GO:0061188
GO:GO:0061186 GO:GO:0031939 Gene3D:1.20.1160.11 SUPFAM:SSF47762
GO:GO:0016479 eggNOG:COG5602 KO:K11644 OMA:NDEWASH
OrthoDB:EOG4X3M8D InterPro:IPR013194 Pfam:PF08295 SMART:SM00761
GeneTree:ENSGT00390000007239 EMBL:M36822 EMBL:Z74746 PIR:S66686
RefSeq:NP_014639.1 ProteinModelPortal:P22579 SMR:P22579
DIP:DIP-597N IntAct:P22579 MINT:MINT-422975 STRING:P22579
PaxDb:P22579 PeptideAtlas:P22579 EnsemblFungi:YOL004W GeneID:854158
KEGG:sce:YOL004W CYGD:YOL004w HOGENOM:HOG000248545 NextBio:975926
Genevestigator:P22579 GermOnline:YOL004W Uniprot:P22579
Length = 1536
Score = 370 (135.3 bits), Expect = 8.8e-69, Sum P(4) = 8.8e-69
Identities = 86/223 (38%), Positives = 123/223 (55%)
Query: 486 YSSKDKYLAKPIQE---LDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS- 541
Y K K + + E LDL CE PSY+ LPK+ S R ++ EVLND WV
Sbjct: 726 YQEKTKCIENIVHEKHRLDLDLCEAFGPSYKRLPKSDTFMPCSGRDDMCWEVLNDEWVGH 785
Query: 542 VTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKT 601
SED F RKNQYEE+LF+ E++R E D +ES T + +E ++ KI N T
Sbjct: 786 PVWASEDSGFIAHRKNQYEETLFKIEEERHEYDFYIESNLRTIQCLETIVNKIENMTENE 845
Query: 602 DGPIRVEDHF--TALNL--RCIERLYG-DHGLDVMDVLRKNASLALPVILTRLKQKQEEW 656
++ T++ + + I ++Y + G +++D L ++ ++ PV+L RLKQK EEW
Sbjct: 846 KANFKLPPGLGHTSMTIYKKVIRKVYDKERGFEIIDALHEHPAVTAPVVLKRLKQKDEEW 905
Query: 657 ARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKAL 699
R + ++NKVW E+ K + KSLDH FKQ D K L K L
Sbjct: 906 RRAQREWNKVWRELEQKVFFKSLDHLGLTFKQADKKLLTTKQL 948
Score = 226 (84.6 bits), Expect = 8.8e-69, Sum P(4) = 8.8e-69
Identities = 47/95 (49%), Positives = 64/95 (67%)
Query: 108 LPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENK 167
+P+ + +P ED + VEF +AI++VNKIKTRF +YK FL+IL Y++E K
Sbjct: 388 IPQSQSL-VPQEDAKK--NVDVEFSQAISYVNKIKTRFADQPDIYKHFLEILQTYQREQK 444
Query: 168 SITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAAS 202
I EVY +V LFQ+ PDLLE+F FLPDSS +A+
Sbjct: 445 PINEVYAQVTHLFQNAPDLLEDFKKFLPDSSASAN 479
Score = 206 (77.6 bits), Expect = 8.8e-69, Sum P(4) = 8.8e-69
Identities = 42/81 (51%), Positives = 54/81 (66%)
Query: 43 LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
L DAL+YL+ VK F + + Y+ FL++MKDFK+Q IDT GVI RV LF+G+ LI
Sbjct: 219 LNVKDALSYLEQVKFQFSSRPDIYNLFLDIMKDFKSQAIDTPGVIERVSTLFRGYPILIQ 278
Query: 103 GFNTFLPKGYEITLPLEDEQP 123
GFNTFLP+GY I + P
Sbjct: 279 GFNTFLPQGYRIECSSNPDDP 299
Score = 110 (43.8 bits), Expect = 1.7e-40, Sum P(3) = 1.7e-40
Identities = 19/69 (27%), Positives = 40/69 (57%)
Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDL 186
+P+ ++A++++ ++K +F +Y FLDI+ ++ + V + V LF+ +P L
Sbjct: 217 RPLNVKDALSYLEQVKFQFSSRPDIYNLFLDIMKDFKSQAIDTPGVIERVSTLFRGYPIL 276
Query: 187 LEEFTHFLP 195
++ F FLP
Sbjct: 277 IQGFNTFLP 285
Score = 102 (41.0 bits), Expect = 2.4e-51, Sum P(3) = 2.4e-51
Identities = 22/76 (28%), Positives = 41/76 (53%)
Query: 123 PPPKKPVE----FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEA 178
P P +P+E E + F K K R+ G+ H+Y FL ILN+Y ++ + ++ ++V+
Sbjct: 650 PEPTEPIENNISLNEEVTFFEKAK-RYIGNKHLYTEFLKILNLYSQDILDLDDLVEKVDF 708
Query: 179 LFQDHPDLLEEFTHFL 194
+ +L F +F+
Sbjct: 709 YLGSNKELFTWFKNFV 724
Score = 100 (40.3 bits), Expect = 2.8e-40, Sum P(3) = 2.8e-40
Identities = 27/97 (27%), Positives = 49/97 (50%)
Query: 14 IKRP-MISSRGEPSGQTQVVXXXXXXXAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEV 72
I++P M + R P Q+ V + + A++Y+ +K F D+ + Y FLE+
Sbjct: 377 IQQPEMPAHRQIPQSQSLVPQEDAKKNVD-VEFSQAISYVNKIKTRFADQPDIYKHFLEI 435
Query: 73 MKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLP 109
++ ++ ++ V A+V LF+ DL+ F FLP
Sbjct: 436 LQTYQREQKPINEVYAQVTHLFQNAPDLLEDFKKFLP 472
Score = 94 (38.1 bits), Expect = 1.7e-50, Sum P(3) = 1.7e-50
Identities = 24/73 (32%), Positives = 36/73 (49%)
Query: 340 DDKNAMKSMFSQELSFCEKVKDKLRDD---YQEFLRCLHLYTKEIITRSELQSLVGDLLG 396
D K + FSQ +S+ K+K + D Y+ FL L Y +E +E+ + V L
Sbjct: 399 DAKKNVDVEFSQAISYVNKIKTRFADQPDIYKHFLEILQTYQREQKPINEVYAQVTHLFQ 458
Query: 397 RYPDLMDGFNGFL 409
PDL++ F FL
Sbjct: 459 NAPDLLEDFKKFL 471
Score = 90 (36.7 bits), Expect = 8.8e-69, Sum P(4) = 8.8e-69
Identities = 23/79 (29%), Positives = 45/79 (56%)
Query: 350 SQELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNG 407
++E++F EK K + + Y EFL+ L+LY+++I+ +L V LG +L F
Sbjct: 663 NEEVTFFEKAKRYIGNKHLYTEFLKILNLYSQDILDLDDLVEKVDFYLGSNKELFTWFKN 722
Query: 408 FLARCEKSEELLADVMSKK 426
F+ EK++ + +++ +K
Sbjct: 723 FVGYQEKTK-CIENIVHEK 740
Score = 67 (28.6 bits), Expect = 2.7e-31, Sum P(2) = 2.7e-31
Identities = 26/95 (27%), Positives = 42/95 (44%)
Query: 319 PLHQGGEGDENFGMHPVSSSYDDKNAMKSMFSQE-LSFCEKVKDKL--RDD-YQEFLRCL 374
P D N + +S+D+ + + ++ LS+ E+VK + R D Y FL +
Sbjct: 190 PDPSSNHADANDDNNNNENSHDEDADYRPLNVKDALSYLEQVKFQFSSRPDIYNLFLDIM 249
Query: 375 HLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFL 409
+ + I + V L YP L+ GFN FL
Sbjct: 250 KDFKSQAIDTPGVIERVSTLFRGYPILIQGFNTFL 284
Score = 56 (24.8 bits), Expect = 3.8e-30, Sum P(2) = 3.8e-30
Identities = 13/71 (18%), Positives = 34/71 (47%)
Query: 43 LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
++ N+ + + + K +K Y +FL+++ + +D ++ +V +++L
Sbjct: 660 ISLNEEVTFFEKAKRYIGNKH-LYTEFLKILNLYSQDILDLDDLVEKVDFYLGSNKELFT 718
Query: 103 GFNTFLPKGYE 113
F F+ GY+
Sbjct: 719 WFKNFV--GYQ 727
Score = 44 (20.5 bits), Expect = 4.8e-34, Sum P(4) = 4.8e-34
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 540 VSVTSGSEDYSFKHMRKNQYEESL 563
VS +SGS+D S RK Y++ +
Sbjct: 1040 VSESSGSDDGSSIASRKRPYQQEM 1063
Score = 40 (19.1 bits), Expect = 3.2e-33, Sum P(3) = 3.2e-33
Identities = 11/41 (26%), Positives = 16/41 (39%)
Query: 162 YRKEN-KSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAA 201
YR N K ++V+ F PD+ F + D A
Sbjct: 216 YRPLNVKDALSYLEQVKFQFSSRPDIYNLFLDIMKDFKSQA 256
>MGI|MGI:107158 [details] [associations]
symbol:Sin3b "transcriptional regulator, SIN3B (yeast)"
species:10090 "Mus musculus" [GO:0000805 "X chromosome"
evidence=IDA] [GO:0000806 "Y chromosome" evidence=IDA] [GO:0001741
"XY body" evidence=IDA] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0003714 "transcription corepressor activity"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007519 "skeletal muscle tissue
development" evidence=IDA] [GO:0030849 "autosome" evidence=IDA]
[GO:0045786 "negative regulation of cell cycle" evidence=TAS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0048738 "cardiac muscle tissue development"
evidence=IDA] InterPro:IPR003822 Pfam:PF02671 PROSITE:PS51477
MGI:MGI:107158 GO:GO:0005634 GO:GO:0005737 GO:GO:0003714
GO:GO:0045892 GO:GO:0006351 GO:GO:0003682 GO:GO:0048738
GO:GO:0045786 GO:GO:0001741 GO:GO:0007519 GO:GO:0000805
GO:GO:0000806 Gene3D:1.20.1160.11 SUPFAM:SSF47762 GO:GO:0030849
PDB:1E91 PDB:1PD7 PDBsum:1E91 PDBsum:1PD7 eggNOG:COG5602
InterPro:IPR013194 Pfam:PF08295 SMART:SM00761 PDB:2CZY PDBsum:2CZY
HOVERGEN:HBG060425 GeneTree:ENSGT00390000007239 CTD:23309
HOGENOM:HOG000230688 OMA:DVYSLFF OrthoDB:EOG4ZGPBH EMBL:L38622
EMBL:AF038848 EMBL:AK173005 EMBL:BC020049 EMBL:BC021160
IPI:IPI00121971 IPI:IPI00124066 IPI:IPI00338793 IPI:IPI00608092
PIR:I61714 RefSeq:NP_001106719.1 RefSeq:NP_033214.2 UniGene:Mm.2137
PDB:2CR7 PDB:2F05 PDBsum:2CR7 PDBsum:2F05 ProteinModelPortal:Q62141
SMR:Q62141 DIP:DIP-470N IntAct:Q62141 STRING:Q62141
PhosphoSite:Q62141 PaxDb:Q62141 PRIDE:Q62141
Ensembl:ENSMUST00000004494 Ensembl:ENSMUST00000109950 GeneID:20467
KEGG:mmu:20467 UCSC:uc009mgp.2 UCSC:uc009mgq.3 InParanoid:Q62141
EvolutionaryTrace:Q62141 NextBio:298571 Bgee:Q62141
CleanEx:MM_SIN3B Genevestigator:Q62141
GermOnline:ENSMUSG00000031622 Uniprot:Q62141
Length = 1098
Score = 478 (173.3 bits), Expect = 5.0e-68, Sum P(3) = 5.0e-68
Identities = 115/302 (38%), Positives = 168/302 (55%)
Query: 498 QELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKN 557
+E+D ++C+R SYR LPK Y P S RT + EVLND WVS S SED +F +K
Sbjct: 378 REIDYASCKRIGSSYRALPKTYQQPKCSGRTAICKEVLNDTWVSFPSWSEDSTFVSSKKT 437
Query: 558 QYEESLFRCEDDRFELDMLLESVNVTTKRV-EELLEKINNNTIKTDGPIRVEDHF--TA- 613
YEE L RCED+RFELD++LE+ N+ T RV E + +K++ + +R++D T+
Sbjct: 438 PYEEQLHRCEDERFELDVVLET-NLATIRVLESVQKKLSRMAPEDQEKLRLDDCLGGTSE 496
Query: 614 -LNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYS 672
+ R I R+YGD +V++ L++N + A+PV+L RLK K+EEW + FNK+W E Y
Sbjct: 497 VIQRRAIHRIYGDKAPEVIESLKRNPATAVPVVLKRLKAKEEEWREAQQGFNKIWREQYE 556
Query: 673 KNYHKSLDHRSFYFKQQDSKSLGAKALSAXXXXXXXXXXXXDDVLLAIAAGNRR-SIVPH 731
K Y KSLDH++ FKQ D+K+L +K+L D+ + G S PH
Sbjct: 557 KAYLKSLDHQAVNFKQNDTKALRSKSL------LNEIESVYDEHQEQHSEGRSAPSSEPH 610
Query: 732 LEFEYSDPDIHEDLYQLIKYSCGEMCTTEQLDK--VMKIWTTFLEPMLGVPSRPQGAEDT 789
L F Y D I ED LI Y ++ D+ + ++ FL + P ++D+
Sbjct: 611 LIFVYEDRQILEDAAALISYYVKRQPAIQKEDQGTIRQLLHRFLPSLFFSQQCPGTSDDS 670
Query: 790 ED 791
D
Sbjct: 671 AD 672
Score = 211 (79.3 bits), Expect = 5.0e-68, Sum P(3) = 5.0e-68
Identities = 54/153 (35%), Positives = 78/153 (50%)
Query: 47 DALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNT 106
DAL YL VK F Y+ FLE+MK+FK+Q IDT GVI RV +LF H DLI+GFN
Sbjct: 36 DALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRVSQLFHEHPDLIVGFNA 95
Query: 107 FLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKEN 166
FLP GY I +P ++ + + P+ ++ N G+D S+ + E+
Sbjct: 96 FLPLGYRIDIP-KNGKLNIQSPLSSQD-----NSHSHGDCGEDFKQMSYKEDRGQVPLES 149
Query: 167 KSIT-----EVYQEVEALFQDHPDLLEEFTHFL 194
S+ +++ F DHP++ F L
Sbjct: 150 DSVEFNNAISYVNKIKTRFLDHPEIYRSFLEIL 182
Score = 158 (60.7 bits), Expect = 1.8e-62, Sum P(3) = 1.8e-62
Identities = 38/85 (44%), Positives = 49/85 (57%)
Query: 123 PPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKEN----------KSITEV 172
P VEF AI++VNKIKTRF +Y+SFL+IL+ Y+KE S EV
Sbjct: 146 PLESDSVEFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLHTKGRPFRGMSEEEV 205
Query: 173 YQEVEALFQDHPDLLEEFTHFLPDS 197
+ EV LF+ DLL EF FLP++
Sbjct: 206 FTEVANLFRGQEDLLSEFGQFLPEA 230
Score = 138 (53.6 bits), Expect = 2.2e-60, Sum P(3) = 2.2e-60
Identities = 25/70 (35%), Positives = 41/70 (58%)
Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
K PV E+A+ +++++K RF D Y FL+I+ ++ ++ V + V LF +HPD
Sbjct: 29 KLPVHVEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRVSQLFHEHPD 88
Query: 186 LLEEFTHFLP 195
L+ F FLP
Sbjct: 89 LIVGFNAFLP 98
Score = 133 (51.9 bits), Expect = 5.0e-68, Sum P(3) = 5.0e-68
Identities = 32/79 (40%), Positives = 46/79 (58%)
Query: 351 QELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGF 408
QE SF +KV+ L+ Y+ FLRC+ L+ +E+++ SEL LV LG++P+L F F
Sbjct: 297 QEFSFFDKVRRVLKSQEVYENFLRCIALFNQELVSGSELLQLVSPFLGKFPELFAQFKSF 356
Query: 409 LARCEKSEELLADVMSKKS 427
L E S A MS +S
Sbjct: 357 LGVKELS---FAPPMSDRS 372
Score = 103 (41.3 bits), Expect = 1.0e-56, Sum P(3) = 1.0e-56
Identities = 24/75 (32%), Positives = 39/75 (52%)
Query: 46 NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAG----------VIARVKELFK 95
N+A++Y+ +K F D E Y FLE++ ++ +++ T G V V LF+
Sbjct: 155 NNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLHTKGRPFRGMSEEEVFTEVANLFR 214
Query: 96 GHRDLILGFNTFLPK 110
G DL+ F FLP+
Sbjct: 215 GQEDLLSEFGQFLPE 229
Score = 71 (30.1 bits), Expect = 3.0e-50, Sum P(3) = 3.0e-50
Identities = 19/75 (25%), Positives = 36/75 (48%)
Query: 133 EAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTH 192
+ +F +K++ R VY++FL + ++ +E S +E+ Q V P+L +F
Sbjct: 297 QEFSFFDKVR-RVLKSQEVYENFLRCIALFNQELVSGSELLQLVSPFLGKFPELFAQFKS 355
Query: 193 FLPDSSGAASIHYVP 207
FL G + + P
Sbjct: 356 FL----GVKELSFAP 366
Score = 69 (29.3 bits), Expect = 1.1e-53, Sum P(3) = 1.1e-53
Identities = 22/80 (27%), Positives = 36/80 (45%)
Query: 349 FSQELSFCEKVKDKLRDD---YQEFLRCLHLYTKEII----------TRSELQSLVGDLL 395
F+ +S+ K+K + D Y+ FL LH Y KE + + E+ + V +L
Sbjct: 154 FNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLHTKGRPFRGMSEEEVFTEVANLF 213
Query: 396 GRYPDLMDGFNGFLARCEKS 415
DL+ F FL ++S
Sbjct: 214 RGQEDLLSEFGQFLPEAKRS 233
Score = 68 (29.0 bits), Expect = 8.0e-44, Sum P(2) = 8.0e-44
Identities = 18/60 (30%), Positives = 29/60 (48%)
Query: 353 LSFCEKVKDKLRDD---YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFL 409
L++ ++VK + D Y FL + + + I + V L +PDL+ GFN FL
Sbjct: 38 LTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRVSQLFHEHPDLIVGFNAFL 97
Score = 47 (21.6 bits), Expect = 1.3e-41, Sum P(2) = 1.3e-41
Identities = 16/80 (20%), Positives = 33/80 (41%)
Query: 42 KLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLI 101
K T ++ V+ + + + E Y++FL + F + + + ++ V +L
Sbjct: 292 KYGTLQEFSFFDKVRRVLKSQ-EVYENFLRCIALFNQELVSGSELLQLVSPFLGKFPELF 350
Query: 102 LGFNTFLP-KGYEITLPLED 120
F +FL K P+ D
Sbjct: 351 AQFKSFLGVKELSFAPPMSD 370
Score = 38 (18.4 bits), Expect = 2.2e-20, Sum P(3) = 2.2e-20
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 474 FVNKDVGPKMSMYSSKDKYLAKPI 497
+V + VG + + SS + +L KP+
Sbjct: 927 YVEQYVGSEGASSSSTEGFLLKPV 950
>UNIPROTKB|J9NXS4 [details] [associations]
symbol:SIN3B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003822 Pfam:PF02671 PROSITE:PS51477 GO:GO:0005634
GO:GO:0006355 Gene3D:1.20.1160.11 SUPFAM:SSF47762
InterPro:IPR013194 Pfam:PF08295 SMART:SM00761
GeneTree:ENSGT00390000007239 EMBL:AAEX03012305
Ensembl:ENSCAFT00000049746 Uniprot:J9NXS4
Length = 1127
Score = 469 (170.2 bits), Expect = 1.5e-67, Sum P(3) = 1.5e-67
Identities = 109/260 (41%), Positives = 150/260 (57%)
Query: 498 QELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKN 557
+E+D ++C+R SYR LPK Y P S RT + EVLND WVS S SED +F +K
Sbjct: 389 REIDYASCKRIGSSYRALPKTYQQPKCSGRTAICKEVLNDTWVSFPSWSEDSTFVSSKKT 448
Query: 558 QYEESLFRCEDDRFELDMLLESVNVTTKRV-EELLEKINNNTIKTDGPIRVEDHF--TA- 613
YEE L RCED+RFELD++LE+ N+ T RV E + +K++ + R++D T+
Sbjct: 449 PYEEQLHRCEDERFELDVVLET-NLATIRVLESVQKKLSRMAPEDQEKFRLDDCLGGTSE 507
Query: 614 -LNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYS 672
+ R I R+YGD ++++ L+KN A+PV+L RLK K+EEW + FNK+W E Y
Sbjct: 508 VIQRRAIHRIYGDKAPEIIESLKKNPVTAVPVVLKRLKAKEEEWREAQQGFNKIWREQYE 567
Query: 673 KNYHKSLDHRSFYFKQQDSKSLGAKALSAXXXXXXXXXXXXDDVLLAIAAGNRR-SIVPH 731
K Y KSLDH++ FKQ D+K+L +K+L D+ + G S PH
Sbjct: 568 KAYLKSLDHQAVNFKQNDTKALRSKSL------LNEIESVYDEHQEQHSEGRSAPSSEPH 621
Query: 732 LEFEYSDPDIHEDLYQLIKY 751
L F Y D I ED LI Y
Sbjct: 622 LIFVYEDRQILEDAAALISY 641
Score = 217 (81.4 bits), Expect = 1.5e-67, Sum P(3) = 1.5e-67
Identities = 54/151 (35%), Positives = 82/151 (54%)
Query: 47 DALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNT 106
DAL YL VK F Y+ FLE+MK+FK+Q IDT GVI RV +LF H DLI+GFN
Sbjct: 45 DALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRVSQLFHEHPDLIVGFNA 104
Query: 107 FLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKE- 165
FLP GY I +P ++ + + P+ +++ + + F+ +YK + +
Sbjct: 105 FLPLGYRIDIP-KNGKLNIQSPLSSQDSSHNHSDCAENFK-QQMLYKEDKPQVPLESDSV 162
Query: 166 --NKSITEVYQEVEALFQDHPDLLEEFTHFL 194
N +I+ V +++ F DHP++ F L
Sbjct: 163 EFNNAISYV-NKIKTRFLDHPEIYRSFLEIL 192
Score = 164 (62.8 bits), Expect = 5.4e-62, Sum P(3) = 5.4e-62
Identities = 43/107 (40%), Positives = 58/107 (54%)
Query: 119 EDEQPPPKKP--VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSIT------ 170
ED+ P + VEF AI++VNKIKTRF +Y+SFL+IL+ Y+KE S
Sbjct: 150 EDKPQVPLESDSVEFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLSTKGRPFRG 209
Query: 171 ----EVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSI 213
EV+ EV LF+ DLL EF FLP++ + P NS+
Sbjct: 210 MSEEEVFTEVANLFRGQEDLLSEFGQFLPEAKRSLFTGNGPCEMNSV 256
Score = 138 (53.6 bits), Expect = 2.8e-59, Sum P(3) = 2.8e-59
Identities = 25/70 (35%), Positives = 41/70 (58%)
Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
K PV E+A+ +++++K RF D Y FL+I+ ++ ++ V + V LF +HPD
Sbjct: 38 KLPVHVEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRVSQLFHEHPD 97
Query: 186 LLEEFTHFLP 195
L+ F FLP
Sbjct: 98 LIVGFNAFLP 107
Score = 133 (51.9 bits), Expect = 1.5e-67, Sum P(3) = 1.5e-67
Identities = 32/79 (40%), Positives = 46/79 (58%)
Query: 351 QELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGF 408
QE SF +KV+ L+ Y+ FLRC+ L+ +E+++ SEL LV LG++P+L F F
Sbjct: 308 QEFSFFDKVRRVLKSQEVYENFLRCIALFNQELVSGSELLQLVSPFLGKFPELFAQFKSF 367
Query: 409 LARCEKSEELLADVMSKKS 427
L E S A MS +S
Sbjct: 368 LGVKELS---FAPPMSDRS 383
Score = 104 (41.7 bits), Expect = 1.0e-55, Sum P(3) = 1.0e-55
Identities = 24/75 (32%), Positives = 39/75 (52%)
Query: 46 NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAG----------VIARVKELFK 95
N+A++Y+ +K F D E Y FLE++ ++ +++ T G V V LF+
Sbjct: 165 NNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLSTKGRPFRGMSEEEVFTEVANLFR 224
Query: 96 GHRDLILGFNTFLPK 110
G DL+ F FLP+
Sbjct: 225 GQEDLLSEFGQFLPE 239
Score = 71 (30.1 bits), Expect = 8.6e-53, Sum P(3) = 8.6e-53
Identities = 28/117 (23%), Positives = 49/117 (41%)
Query: 315 STAEPLHQGGEGDENFGMHPVSSSYDDKNAMKS---MFSQELSFCEKVKDKLRDD---YQ 368
S+ + H + ENF + + ++S F+ +S+ K+K + D Y+
Sbjct: 127 SSQDSSHNHSDCAENFKQQMLYKEDKPQVPLESDSVEFNNAISYVNKIKTRFLDHPEIYR 186
Query: 369 EFLRCLHLYTKEIIT----------RSELQSLVGDLLGRYPDLMDGFNGFLARCEKS 415
FL LH Y KE ++ E+ + V +L DL+ F FL ++S
Sbjct: 187 SFLEILHTYQKEQLSTKGRPFRGMSEEEVFTEVANLFRGQEDLLSEFGQFLPEAKRS 243
Score = 71 (30.1 bits), Expect = 3.0e-49, Sum P(3) = 3.0e-49
Identities = 19/75 (25%), Positives = 36/75 (48%)
Query: 133 EAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTH 192
+ +F +K++ R VY++FL + ++ +E S +E+ Q V P+L +F
Sbjct: 308 QEFSFFDKVR-RVLKSQEVYENFLRCIALFNQELVSGSELLQLVSPFLGKFPELFAQFKS 366
Query: 193 FLPDSSGAASIHYVP 207
FL G + + P
Sbjct: 367 FL----GVKELSFAP 377
Score = 68 (29.0 bits), Expect = 9.2e-43, Sum P(2) = 9.2e-43
Identities = 18/60 (30%), Positives = 29/60 (48%)
Query: 353 LSFCEKVKDKLRDD---YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFL 409
L++ ++VK + D Y FL + + + I + V L +PDL+ GFN FL
Sbjct: 47 LTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRVSQLFHEHPDLIVGFNAFL 106
Score = 47 (21.6 bits), Expect = 1.5e-40, Sum P(2) = 1.5e-40
Identities = 16/80 (20%), Positives = 33/80 (41%)
Query: 42 KLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLI 101
K T ++ V+ + + + E Y++FL + F + + + ++ V +L
Sbjct: 303 KYGTLQEFSFFDKVRRVLKSQ-EVYENFLRCIALFNQELVSGSELLQLVSPFLGKFPELF 361
Query: 102 LGFNTFLP-KGYEITLPLED 120
F +FL K P+ D
Sbjct: 362 AQFKSFLGVKELSFAPPMSD 381
Score = 37 (18.1 bits), Expect = 6.9e-21, Sum P(3) = 6.9e-21
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 643 PVILTRLKQKQEEW 656
P++L R Q EEW
Sbjct: 1054 PLVLLRHHQHFEEW 1067
>UNIPROTKB|F1NMJ8 [details] [associations]
symbol:SIN3B "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000805 "X chromosome" evidence=IEA] [GO:0000806 "Y
chromosome" evidence=IEA] [GO:0001741 "XY body" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007519 "skeletal muscle tissue development" evidence=IEA]
[GO:0030849 "autosome" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0048738 "cardiac muscle tissue development" evidence=IEA]
InterPro:IPR003822 Pfam:PF02671 PROSITE:PS51477 GO:GO:0005634
GO:GO:0005737 GO:GO:0003714 GO:GO:0045892 GO:GO:0003682
GO:GO:0001741 GO:GO:0000805 GO:GO:0000806 Gene3D:1.20.1160.11
SUPFAM:SSF47762 GO:GO:0030849 InterPro:IPR013194 Pfam:PF08295
SMART:SM00761 GeneTree:ENSGT00390000007239 OMA:DVYSLFF
EMBL:AADN02061989 EMBL:AADN02061988 EMBL:AADN02061985
EMBL:AADN02061986 EMBL:AADN02061983 EMBL:AADN02061984
EMBL:AADN02061987 EMBL:AADN02061990 EMBL:AADN02061991
IPI:IPI00600088 Ensembl:ENSGALT00000005982 Uniprot:F1NMJ8
Length = 1078
Score = 480 (174.0 bits), Expect = 4.3e-67, Sum P(4) = 4.3e-67
Identities = 118/303 (38%), Positives = 168/303 (55%)
Query: 498 QELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKN 557
+E+D ++C+R SYR LPK Y P S RT + EVLND WVS S SED +F +K
Sbjct: 343 REIDYASCKRIGSSYRALPKTYQQPKCSGRTAICKEVLNDTWVSFPSWSEDSTFVSSKKT 402
Query: 558 QYEESLFRCEDDRFELDMLLESVNVTTKRV-EELLEKINNNTIKTDGPIRVEDHF--TA- 613
YEE L RCED+RFELD++LE+ N+ T RV E + +K++ T + R++D T+
Sbjct: 403 PYEEQLHRCEDERFELDVVLET-NLATIRVLESVQKKLSRLTQEDQEKFRLDDCLGGTSE 461
Query: 614 -LNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYS 672
+ R I R+YGD ++++ L+KN A+PV+L RLK K+EEW + FNK+W E Y
Sbjct: 462 VIQRRAIYRIYGDKAPEIIESLKKNPVTAVPVVLKRLKAKEEEWREAQQGFNKIWREQYE 521
Query: 673 KNYHKSLDHRSFYFKQQDSKSLGAKALSAXXXXXXXXXXXXDDVLLAIAAGNRRSI-VPH 731
K Y KSLDH++ FKQ D+K+L +K+L D+ + G S PH
Sbjct: 522 KAYLKSLDHQAVNFKQNDTKALRSKSL------LNEIESVYDEHQEQHSEGRSSSTNEPH 575
Query: 732 LEFEYSDPDIHEDLYQLIKYSCGEMCTTEQLDK--VMKIWTTFL-EPMLGVPSRPQGAED 788
L F Y D I ED LI Y T ++ D+ + +I F+ E P +E+
Sbjct: 576 LIFIYEDKQILEDAASLISYYVKRQPTIQKEDQATIRQIMHHFIPELFFSQPPEHSISEE 635
Query: 789 TED 791
+ D
Sbjct: 636 STD 638
Score = 208 (78.3 bits), Expect = 4.3e-67, Sum P(4) = 4.3e-67
Identities = 54/147 (36%), Positives = 77/147 (52%)
Query: 49 LAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFL 108
L+YL VK F Y+ FLE+MK+FK+Q IDT GVI RV +LF H DLI+GFN FL
Sbjct: 1 LSYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRVSQLFHEHPDLIVGFNAFL 60
Query: 109 PKGYEITLPLEDEQPPPKKPVEFEEAINFVN-KIKTRFQGDDHVYKSFLDILNMYRKENK 167
P GY I +P + E + N + + R Q KS + + + + N
Sbjct: 61 PLGYRIEIPKNGKLSIQSPLTSQENSHNHSDCSEEFRHQLPYKEDKSQIPLESDSVEFNN 120
Query: 168 SITEVYQEVEALFQDHPDLLEEFTHFL 194
+I+ V +++ F DHP++ F L
Sbjct: 121 AISYV-NKIKTRFLDHPEIYRSFLEIL 146
Score = 166 (63.5 bits), Expect = 1.0e-62, Sum P(4) = 1.0e-62
Identities = 49/128 (38%), Positives = 65/128 (50%)
Query: 97 HRDLILGFNTFLP-KGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSF 155
H D F LP K + +PLE + VEF AI++VNKIKTRF +Y+SF
Sbjct: 89 HSDCSEEFRHQLPYKEDKSQIPLESDS------VEFNNAISYVNKIKTRFLDHPEIYRSF 142
Query: 156 LDILNMYRKEN----------KSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHY 205
L+IL+ Y+KE S EV+ EV LF+ DLL EF FLP++ +
Sbjct: 143 LEILHTYQKEQLNTKGRPFRGMSEEEVFTEVANLFRGQEDLLSEFGQFLPEAKRSLFTGN 202
Query: 206 VPSGRNSI 213
P NS+
Sbjct: 203 GPCEVNSV 210
Score = 129 (50.5 bits), Expect = 4.3e-67, Sum P(4) = 4.3e-67
Identities = 28/67 (41%), Positives = 41/67 (61%)
Query: 351 QELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGF 408
QE SF +KV+ L+ Y+ FLRC+ L+ +E+++ SEL LV LG++P+L F F
Sbjct: 262 QEFSFFDKVRRVLKSQEVYENFLRCIALFNQELVSGSELLQLVTPFLGKFPELFAQFKSF 321
Query: 409 LARCEKS 415
L E S
Sbjct: 322 LGVKELS 328
Score = 115 (45.5 bits), Expect = 2.1e-57, Sum P(4) = 2.1e-57
Identities = 20/61 (32%), Positives = 36/61 (59%)
Query: 135 INFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFL 194
+++++++K RF D Y FL+I+ ++ ++ V + V LF +HPDL+ F FL
Sbjct: 1 LSYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRVSQLFHEHPDLIVGFNAFL 60
Query: 195 P 195
P
Sbjct: 61 P 61
Score = 105 (42.0 bits), Expect = 2.3e-56, Sum P(4) = 2.3e-56
Identities = 24/75 (32%), Positives = 40/75 (53%)
Query: 46 NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAG----------VIARVKELFK 95
N+A++Y+ +K F D E Y FLE++ ++ ++++T G V V LF+
Sbjct: 119 NNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLNTKGRPFRGMSEEEVFTEVANLFR 178
Query: 96 GHRDLILGFNTFLPK 110
G DL+ F FLP+
Sbjct: 179 GQEDLLSEFGQFLPE 193
Score = 71 (30.1 bits), Expect = 1.2e-43, Sum P(3) = 1.2e-43
Identities = 19/60 (31%), Positives = 29/60 (48%)
Query: 353 LSFCEKVKDKLRDD---YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFL 409
LS+ ++VK + D Y FL + + + I + V L +PDL+ GFN FL
Sbjct: 1 LSYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRVSQLFHEHPDLIVGFNAFL 60
Score = 69 (29.3 bits), Expect = 3.5e-51, Sum P(4) = 3.5e-51
Identities = 22/80 (27%), Positives = 36/80 (45%)
Query: 349 FSQELSFCEKVKDKLRDD---YQEFLRCLHLYTKEII----------TRSELQSLVGDLL 395
F+ +S+ K+K + D Y+ FL LH Y KE + + E+ + V +L
Sbjct: 118 FNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLNTKGRPFRGMSEEEVFTEVANLF 177
Query: 396 GRYPDLMDGFNGFLARCEKS 415
DL+ F FL ++S
Sbjct: 178 RGQEDLLSEFGQFLPEAKRS 197
Score = 69 (29.3 bits), Expect = 3.8e-50, Sum P(4) = 3.8e-50
Identities = 17/62 (27%), Positives = 32/62 (51%)
Query: 133 EAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTH 192
+ +F +K++ R VY++FL + ++ +E S +E+ Q V P+L +F
Sbjct: 262 QEFSFFDKVR-RVLKSQEVYENFLRCIALFNQELVSGSELLQLVTPFLGKFPELFAQFKS 320
Query: 193 FL 194
FL
Sbjct: 321 FL 322
Score = 49 (22.3 bits), Expect = 2.3e-41, Sum P(3) = 2.3e-41
Identities = 17/80 (21%), Positives = 33/80 (41%)
Query: 42 KLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLI 101
K T ++ V+ + + + E Y++FL + F + + + ++ V +L
Sbjct: 257 KYGTLQEFSFFDKVRRVLKSQ-EVYENFLRCIALFNQELVSGSELLQLVTPFLGKFPELF 315
Query: 102 LGFNTFLP-KGYEITLPLED 120
F +FL K PL D
Sbjct: 316 AQFKSFLGVKELSFASPLSD 335
Score = 42 (19.8 bits), Expect = 7.8e-50, Sum P(4) = 7.8e-50
Identities = 8/14 (57%), Positives = 9/14 (64%)
Query: 182 DHPDLLEEFTHFLP 195
+H D EEF H LP
Sbjct: 88 NHSDCSEEFRHQLP 101
Score = 42 (19.8 bits), Expect = 4.2e-20, Sum P(3) = 4.2e-20
Identities = 17/59 (28%), Positives = 26/59 (44%)
Query: 535 LNDHWVSVTSGSEDYSFKH---MRKNQYEESLFRCEDDRFEL--DMLLESVNVTTKRVE 588
LN H + SEDY ++ R Q + + +FE + LE NVT + V+
Sbjct: 976 LNTHKMMFIMNSEDYMYRRGALCRAKQVQPMVLLKHHQQFEEWHNRWLEE-NVTMEAVD 1033
Score = 37 (18.1 bits), Expect = 4.3e-67, Sum P(4) = 4.3e-67
Identities = 9/32 (28%), Positives = 17/32 (53%)
Query: 980 KILRYNAESVKQFKIEREEGELSPNGDFEEDN 1011
KI R + + +++ E+E +L G E+ N
Sbjct: 714 KIYRQAQKQLLEYRTEKEREKLLCEGRKEKTN 745
>UNIPROTKB|F1S9U7 [details] [associations]
symbol:SIN3B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001741 "XY body"
evidence=IEA] [GO:0000806 "Y chromosome" evidence=IEA] [GO:0000805
"X chromosome" evidence=IEA] [GO:0048738 "cardiac muscle tissue
development" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0030849 "autosome"
evidence=IEA] [GO:0007519 "skeletal muscle tissue development"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR003822 Pfam:PF02671 PROSITE:PS51477 GO:GO:0005634
GO:GO:0005737 GO:GO:0003714 GO:GO:0045892 GO:GO:0003682
GO:GO:0048738 GO:GO:0001741 GO:GO:0007519 GO:GO:0000805
GO:GO:0000806 Gene3D:1.20.1160.11 SUPFAM:SSF47762 GO:GO:0030849
InterPro:IPR013194 Pfam:PF08295 SMART:SM00761
GeneTree:ENSGT00390000007239 OMA:DVYSLFF EMBL:CU915550
Ensembl:ENSSSCT00000015147 Uniprot:F1S9U7
Length = 1141
Score = 469 (170.2 bits), Expect = 2.3e-65, Sum P(4) = 2.3e-65
Identities = 109/260 (41%), Positives = 150/260 (57%)
Query: 498 QELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKN 557
+E+D ++C+R SYR LPK Y P S RT + EVLND WVS S SED +F +K
Sbjct: 403 REIDYASCKRIGSSYRALPKTYQQPKCSGRTAICKEVLNDTWVSFPSWSEDSTFVSSKKT 462
Query: 558 QYEESLFRCEDDRFELDMLLESVNVTTKRV-EELLEKINNNTIKTDGPIRVEDHF--TA- 613
YEE L RCED+RFELD++LE+ N+ T RV E + +K++ + R++D T+
Sbjct: 463 PYEEQLHRCEDERFELDVVLET-NLATIRVLESVQKKLSRMAPEDQEKFRLDDCLGGTSE 521
Query: 614 -LNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYS 672
+ R I R+YGD ++++ L+KN A+PV+L RLK K+EEW + FNK+W E Y
Sbjct: 522 VIQRRAIHRIYGDKAPEIIESLKKNPVTAVPVVLKRLKAKEEEWREAQQGFNKIWREQYE 581
Query: 673 KNYHKSLDHRSFYFKQQDSKSLGAKALSAXXXXXXXXXXXXDDVLLAIAAGNRR-SIVPH 731
K Y KSLDH++ FKQ D+K+L +K+L D+ + G S PH
Sbjct: 582 KAYLKSLDHQAVNFKQNDTKALRSKSL------LNEIESVYDEHQEQHSEGRSAPSSEPH 635
Query: 732 LEFEYSDPDIHEDLYQLIKY 751
L F Y D I ED LI Y
Sbjct: 636 LIFVYEDRQILEDAAALISY 655
Score = 202 (76.2 bits), Expect = 2.3e-65, Sum P(4) = 2.3e-65
Identities = 41/71 (57%), Positives = 48/71 (67%)
Query: 47 DALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNT 106
DAL YL VK F Y+ FLE+MK+FK+Q IDT GVI RV +LF H DLI+GFN
Sbjct: 39 DALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRVSQLFHEHPDLIVGFNA 98
Query: 107 FLPKGYEITLP 117
FLP GY I +P
Sbjct: 99 FLPLGYRIDIP 109
Score = 175 (66.7 bits), Expect = 1.5e-62, Sum P(4) = 1.5e-62
Identities = 51/128 (39%), Positives = 66/128 (51%)
Query: 81 IDTAGVIARVKELFKGHRDLILGFNTFLP-KGYEITLPLEDEQPPPKKPVEFEEAINFVN 139
I GV A KE H D F +P K + +PLE + VEF AI++VN
Sbjct: 134 ISAPGVFAG-KENSHNHSDCAENFKQQMPYKEDKPQVPLESDS------VEFNNAISYVN 186
Query: 140 KIKTRFQGDDHVYKSFLDILNMYRKENKSIT----------EVYQEVEALFQDHPDLLEE 189
KIKTRF +Y+SFL+IL+ Y+KE S EV+ EV LF+ DLL E
Sbjct: 187 KIKTRFLDHPEIYRSFLEILHTYQKEQLSTKGRPFRGMSEEEVFTEVANLFRGQEDLLSE 246
Query: 190 FTHFLPDS 197
F FLP++
Sbjct: 247 FGQFLPEA 254
Score = 138 (53.6 bits), Expect = 1.1e-58, Sum P(4) = 1.1e-58
Identities = 25/70 (35%), Positives = 41/70 (58%)
Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
K PV E+A+ +++++K RF D Y FL+I+ ++ ++ V + V LF +HPD
Sbjct: 32 KLPVHVEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRVSQLFHEHPD 91
Query: 186 LLEEFTHFLP 195
L+ F FLP
Sbjct: 92 LIVGFNAFLP 101
Score = 133 (51.9 bits), Expect = 2.3e-65, Sum P(4) = 2.3e-65
Identities = 32/79 (40%), Positives = 46/79 (58%)
Query: 351 QELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGF 408
QE SF +KV+ L+ Y+ FLRC+ L+ +E+++ SEL LV LG++P+L F F
Sbjct: 322 QEFSFFDKVRRVLKSQEVYENFLRCIALFNQELVSGSELLQLVSPFLGKFPELFAQFKSF 381
Query: 409 LARCEKSEELLADVMSKKS 427
L E S A MS +S
Sbjct: 382 LGVKELS---FAPPMSDRS 397
Score = 104 (41.7 bits), Expect = 3.7e-55, Sum P(4) = 3.7e-55
Identities = 24/75 (32%), Positives = 39/75 (52%)
Query: 46 NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAG----------VIARVKELFK 95
N+A++Y+ +K F D E Y FLE++ ++ +++ T G V V LF+
Sbjct: 179 NNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLSTKGRPFRGMSEEEVFTEVANLFR 238
Query: 96 GHRDLILGFNTFLPK 110
G DL+ F FLP+
Sbjct: 239 GQEDLLSEFGQFLPE 253
Score = 71 (30.1 bits), Expect = 6.7e-59, Sum P(4) = 6.7e-59
Identities = 19/75 (25%), Positives = 36/75 (48%)
Query: 133 EAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTH 192
+ +F +K++ R VY++FL + ++ +E S +E+ Q V P+L +F
Sbjct: 322 QEFSFFDKVR-RVLKSQEVYENFLRCIALFNQELVSGSELLQLVSPFLGKFPELFAQFKS 380
Query: 193 FLPDSSGAASIHYVP 207
FL G + + P
Sbjct: 381 FL----GVKELSFAP 391
Score = 69 (29.3 bits), Expect = 1.1e-58, Sum P(4) = 1.1e-58
Identities = 22/80 (27%), Positives = 36/80 (45%)
Query: 349 FSQELSFCEKVKDKLRDD---YQEFLRCLHLYTKEIIT----------RSELQSLVGDLL 395
F+ +S+ K+K + D Y+ FL LH Y KE ++ E+ + V +L
Sbjct: 178 FNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLSTKGRPFRGMSEEEVFTEVANLF 237
Query: 396 GRYPDLMDGFNGFLARCEKS 415
DL+ F FL ++S
Sbjct: 238 RGQEDLLSEFGQFLPEAKRS 257
Score = 68 (29.0 bits), Expect = 6.6e-42, Sum P(3) = 6.6e-42
Identities = 18/60 (30%), Positives = 29/60 (48%)
Query: 353 LSFCEKVKDKLRDD---YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFL 409
L++ ++VK + D Y FL + + + I + V L +PDL+ GFN FL
Sbjct: 41 LTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRVSQLFHEHPDLIVGFNAFL 100
Score = 50 (22.7 bits), Expect = 8.5e-11, Sum P(3) = 8.5e-11
Identities = 15/59 (25%), Positives = 29/59 (49%)
Query: 120 DEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLD-ILNMYRKENKSITEVYQEVE 177
++QPP KP++ ++ F N F ++++ +L +YR+ K + E E E
Sbjct: 739 EQQPPQHKPLDDVYSLFFANNNWYFFL---RLHQTLCSRLLKIYRQAQKQLLEYRTEKE 794
Score = 47 (21.6 bits), Expect = 1.0e-39, Sum P(3) = 1.0e-39
Identities = 16/80 (20%), Positives = 33/80 (41%)
Query: 42 KLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLI 101
K T ++ V+ + + + E Y++FL + F + + + ++ V +L
Sbjct: 317 KYGTLQEFSFFDKVRRVLKSQ-EVYENFLRCIALFNQELVSGSELLQLVSPFLGKFPELF 375
Query: 102 LGFNTFLP-KGYEITLPLED 120
F +FL K P+ D
Sbjct: 376 AQFKSFLGVKELSFAPPMSD 395
Score = 37 (18.1 bits), Expect = 2.3e-65, Sum P(4) = 2.3e-65
Identities = 9/32 (28%), Positives = 17/32 (53%)
Query: 980 KILRYNAESVKQFKIEREEGELSPNGDFEEDN 1011
KI R + + +++ E+E +L G E+ N
Sbjct: 777 KIYRQAQKQLLEYRTEKEREKLLCEGRREKGN 808
Score = 37 (18.1 bits), Expect = 3.0e-19, Sum P(3) = 3.0e-19
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 643 PVILTRLKQKQEEW 656
P++L R Q EEW
Sbjct: 1068 PLVLLRHHQHFEEW 1081
>UNIPROTKB|O75182 [details] [associations]
symbol:SIN3B "Paired amphipathic helix protein Sin3b"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0000805 "X chromosome"
evidence=IEA] [GO:0000806 "Y chromosome" evidence=IEA] [GO:0001741
"XY body" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007519
"skeletal muscle tissue development" evidence=IEA] [GO:0030849
"autosome" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0048738 "cardiac
muscle tissue development" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0044255 "cellular lipid
metabolic process" evidence=TAS] [GO:0044281 "small molecule
metabolic process" evidence=TAS] Reactome:REACT_111217
InterPro:IPR003822 Pfam:PF02671 PROSITE:PS51477 GO:GO:0005737
GO:GO:0003714 GO:GO:0045892
Pathway_Interaction_DB:telomerasepathway GO:GO:0005654
GO:GO:0044281 GO:GO:0044255 GO:GO:0006351 GO:GO:0003682
GO:GO:0048738 EMBL:CH471106
Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0001741
GO:GO:0007519 GO:GO:0000805 GO:GO:0000806 Gene3D:1.20.1160.11
SUPFAM:SSF47762 GO:GO:0030849 eggNOG:COG5602 InterPro:IPR013194
Pfam:PF08295 SMART:SM00761 HOVERGEN:HBG060425 EMBL:AY706204
EMBL:AB014600 EMBL:BC005113 EMBL:BC025026 EMBL:BC063531
EMBL:BC110821 IPI:IPI00464980 IPI:IPI00607589 IPI:IPI00607724
RefSeq:NP_056075.1 UniGene:Hs.13999 ProteinModelPortal:O75182
SMR:O75182 IntAct:O75182 STRING:O75182 PhosphoSite:O75182
PaxDb:O75182 PRIDE:O75182 DNASU:23309 Ensembl:ENST00000248054
Ensembl:ENST00000379803 GeneID:23309 KEGG:hsa:23309 UCSC:uc002new.3
UCSC:uc002ney.2 UCSC:uc002nez.2 CTD:23309 GeneCards:GC19P016940
HGNC:HGNC:19354 HPA:HPA050329 MIM:607777 neXtProt:NX_O75182
PharmGKB:PA134909030 HOGENOM:HOG000230688 InParanoid:O75182
OMA:DVYSLFF OrthoDB:EOG4ZGPBH GenomeRNAi:23309 NextBio:45174
Bgee:O75182 CleanEx:HS_SIN3B Genevestigator:O75182
GermOnline:ENSG00000127511 Uniprot:O75182
Length = 1162
Score = 391 (142.7 bits), Expect = 1.7e-63, Sum P(4) = 1.7e-63
Identities = 94/226 (41%), Positives = 129/226 (57%)
Query: 532 AEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRV-EEL 590
A VLND WVS S SED +F +K YEE L RCED+RFELD++LE+ N+ T RV E +
Sbjct: 453 AGVLNDTWVSFPSWSEDSTFVSSKKTPYEEQLHRCEDERFELDVVLET-NLATIRVLESV 511
Query: 591 LEKINNNTIKTDGPIRVEDHF--TA--LNLRCIERLYGDHGLDVMDVLRKNASLALPVIL 646
+K++ + R++D T+ + R I R+YGD ++++ L+KN A+PV+L
Sbjct: 512 QKKLSRMAPEDQEKFRLDDSLGGTSEVIQRRAIYRIYGDKAPEIIESLKKNPVTAVPVVL 571
Query: 647 TRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAXXXXX 706
RLK K+EEW + FNK+W E Y K Y KSLDH++ FKQ D+K+L +K+L
Sbjct: 572 KRLKAKEEEWREAQQGFNKIWREQYEKAYLKSLDHQAVNFKQNDTKALRSKSL------L 625
Query: 707 XXXXXXXDDVLLAIAAGNRR-SIVPHLEFEYSDPDIHEDLYQLIKY 751
D+ + G S PHL F Y D I ED LI Y
Sbjct: 626 NEIESVYDEHQEQHSEGRSAPSSEPHLIFVYEDRQILEDAAALISY 671
Score = 206 (77.6 bits), Expect = 1.7e-63, Sum P(4) = 1.7e-63
Identities = 54/149 (36%), Positives = 77/149 (51%)
Query: 47 DALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNT 106
DAL YL VK F Y+ FLE+MK+FK+Q IDT GVI RV +LF H DLI+GFN
Sbjct: 43 DALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRVSQLFHEHPDLIVGFNA 102
Query: 107 FLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVY-KSFLDILNMYRKE 165
FLP GY I +P + E + N + + Q + K + + + +
Sbjct: 103 FLPLGYRIDIPKNGKLNIQSPLTSQENSHNHGDGAEDFKQQVPYKEDKPQVPLESDSVEF 162
Query: 166 NKSITEVYQEVEALFQDHPDLLEEFTHFL 194
N +I+ V +++ F DHP++ F L
Sbjct: 163 NNAISYV-NKIKTRFLDHPEIYRSFLEIL 190
Score = 165 (63.1 bits), Expect = 3.1e-59, Sum P(4) = 3.1e-59
Identities = 43/120 (35%), Positives = 65/120 (54%)
Query: 116 LPLEDEQPP-PKKP--VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKEN------ 166
+P ++++P P + VEF AI++VNKIKTRF +Y+SFL+IL+ Y+KE
Sbjct: 144 VPYKEDKPQVPLESDSVEFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLNTRGR 203
Query: 167 ----KSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMP 222
S EV+ EV LF+ DLL EF FLP++ + P +S+ ++ P
Sbjct: 204 PFRGMSEEEVFTEVANLFRGQEDLLSEFGQFLPEAKRSLFTGNGPCEMHSVQKNEHDKTP 263
Score = 138 (53.6 bits), Expect = 2.0e-56, Sum P(4) = 2.0e-56
Identities = 25/70 (35%), Positives = 41/70 (58%)
Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
K PV E+A+ +++++K RF D Y FL+I+ ++ ++ V + V LF +HPD
Sbjct: 36 KLPVHVEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRVSQLFHEHPD 95
Query: 186 LLEEFTHFLP 195
L+ F FLP
Sbjct: 96 LIVGFNAFLP 105
Score = 133 (51.9 bits), Expect = 1.7e-63, Sum P(4) = 1.7e-63
Identities = 32/79 (40%), Positives = 46/79 (58%)
Query: 351 QELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGF 408
QE SF +KV+ L+ Y+ FLRC+ L+ +E+++ SEL LV LG++P+L F F
Sbjct: 306 QEFSFFDKVRRVLKSQEVYENFLRCIALFNQELVSGSELLQLVSPFLGKFPELFAQFKSF 365
Query: 409 LARCEKSEELLADVMSKKS 427
L E S A MS +S
Sbjct: 366 LGVKELS---FAPPMSDRS 381
Score = 105 (42.0 bits), Expect = 5.3e-53, Sum P(4) = 5.3e-53
Identities = 24/75 (32%), Positives = 40/75 (53%)
Query: 46 NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAG----------VIARVKELFK 95
N+A++Y+ +K F D E Y FLE++ ++ ++++T G V V LF+
Sbjct: 163 NNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLNTRGRPFRGMSEEEVFTEVANLFR 222
Query: 96 GHRDLILGFNTFLPK 110
G DL+ F FLP+
Sbjct: 223 GQEDLLSEFGQFLPE 237
Score = 102 (41.0 bits), Expect = 1.7e-63, Sum P(4) = 1.7e-63
Identities = 22/53 (41%), Positives = 32/53 (60%)
Query: 498 QELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVT-SGSEDY 549
+E+D ++C+R SYR LPK Y P S RT + E+ DHW + S ++DY
Sbjct: 387 REIDYASCKRIGSSYRALPKTYQQPKCSGRTAICKEL--DHWTLLQGSWTDDY 437
Score = 79 (32.9 bits), Expect = 8.0e-51, Sum P(4) = 8.0e-51
Identities = 31/117 (26%), Positives = 51/117 (43%)
Query: 315 STAEPLHQGGEGDENFGMHPVSSSYDDKNAMKS---MFSQELSFCEKVKDKLRDD---YQ 368
++ E H G+G E+F + ++S F+ +S+ K+K + D Y+
Sbjct: 125 TSQENSHNHGDGAEDFKQQVPYKEDKPQVPLESDSVEFNNAISYVNKIKTRFLDHPEIYR 184
Query: 369 EFLRCLHLYTKEII-TRS---------ELQSLVGDLLGRYPDLMDGFNGFLARCEKS 415
FL LH Y KE + TR E+ + V +L DL+ F FL ++S
Sbjct: 185 SFLEILHTYQKEQLNTRGRPFRGMSEEEVFTEVANLFRGQEDLLSEFGQFLPEAKRS 241
Score = 71 (30.1 bits), Expect = 1.4e-46, Sum P(4) = 1.4e-46
Identities = 19/75 (25%), Positives = 36/75 (48%)
Query: 133 EAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTH 192
+ +F +K++ R VY++FL + ++ +E S +E+ Q V P+L +F
Sbjct: 306 QEFSFFDKVR-RVLKSQEVYENFLRCIALFNQELVSGSELLQLVSPFLGKFPELFAQFKS 364
Query: 193 FLPDSSGAASIHYVP 207
FL G + + P
Sbjct: 365 FL----GVKELSFAP 375
Score = 68 (29.0 bits), Expect = 7.3e-40, Sum P(3) = 7.3e-40
Identities = 18/60 (30%), Positives = 29/60 (48%)
Query: 353 LSFCEKVKDKLRDD---YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFL 409
L++ ++VK + D Y FL + + + I + V L +PDL+ GFN FL
Sbjct: 45 LTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRVSQLFHEHPDLIVGFNAFL 104
Score = 47 (21.6 bits), Expect = 1.1e-37, Sum P(3) = 1.1e-37
Identities = 16/80 (20%), Positives = 33/80 (41%)
Query: 42 KLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLI 101
K T ++ V+ + + + E Y++FL + F + + + ++ V +L
Sbjct: 301 KYGTLQEFSFFDKVRRVLKSQ-EVYENFLRCIALFNQELVSGSELLQLVSPFLGKFPELF 359
Query: 102 LGFNTFLP-KGYEITLPLED 120
F +FL K P+ D
Sbjct: 360 AQFKSFLGVKELSFAPPMSD 379
Score = 37 (18.1 bits), Expect = 1.6e-25, Sum P(4) = 1.6e-25
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 643 PVILTRLKQKQEEW 656
P++L R Q EEW
Sbjct: 1089 PLVLLRHHQHFEEW 1102
>UNIPROTKB|F1PN34 [details] [associations]
symbol:SIN3B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003822 Pfam:PF02671 PROSITE:PS51477 GO:GO:0005634
GO:GO:0006355 Gene3D:1.20.1160.11 SUPFAM:SSF47762
InterPro:IPR013194 Pfam:PF08295 SMART:SM00761
GeneTree:ENSGT00390000007239 OMA:DVYSLFF EMBL:AAEX03012305
Ensembl:ENSCAFT00000024754 Uniprot:F1PN34
Length = 1156
Score = 391 (142.7 bits), Expect = 6.8e-63, Sum P(4) = 6.8e-63
Identities = 93/225 (41%), Positives = 129/225 (57%)
Query: 533 EVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRV-EELL 591
+VLND WVS S SED +F +K YEE L RCED+RFELD++LE+ N+ T RV E +
Sbjct: 453 QVLNDTWVSFPSWSEDSTFVSSKKTPYEEQLHRCEDERFELDVVLET-NLATIRVLESVQ 511
Query: 592 EKINNNTIKTDGPIRVEDHF--TA--LNLRCIERLYGDHGLDVMDVLRKNASLALPVILT 647
+K++ + R++D T+ + R I R+YGD ++++ L+KN A+PV+L
Sbjct: 512 KKLSRMAPEDQEKFRLDDCLGGTSEVIQRRAIHRIYGDKAPEIIESLKKNPVTAVPVVLK 571
Query: 648 RLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAXXXXXX 707
RLK K+EEW + FNK+W E Y K Y KSLDH++ FKQ D+K+L +K+L
Sbjct: 572 RLKAKEEEWREAQQGFNKIWREQYEKAYLKSLDHQAVNFKQNDTKALRSKSL------LN 625
Query: 708 XXXXXXDDVLLAIAAGNRR-SIVPHLEFEYSDPDIHEDLYQLIKY 751
D+ + G S PHL F Y D I ED LI Y
Sbjct: 626 EIESVYDEHQEQHSEGRSAPSSEPHLIFVYEDRQILEDAAALISY 670
Score = 217 (81.4 bits), Expect = 6.8e-63, Sum P(4) = 6.8e-63
Identities = 54/151 (35%), Positives = 82/151 (54%)
Query: 47 DALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNT 106
DAL YL VK F Y+ FLE+MK+FK+Q IDT GVI RV +LF H DLI+GFN
Sbjct: 43 DALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRVSQLFHEHPDLIVGFNA 102
Query: 107 FLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKE- 165
FLP GY I +P ++ + + P+ +++ + + F+ +YK + +
Sbjct: 103 FLPLGYRIDIP-KNGKLNIQSPLSSQDSSHNHSDCAENFK-QQMLYKEDKPQVPLESDSV 160
Query: 166 --NKSITEVYQEVEALFQDHPDLLEEFTHFL 194
N +I+ V +++ F DHP++ F L
Sbjct: 161 EFNNAISYV-NKIKTRFLDHPEIYRSFLEIL 190
Score = 164 (62.8 bits), Expect = 2.2e-57, Sum P(4) = 2.2e-57
Identities = 43/107 (40%), Positives = 58/107 (54%)
Query: 119 EDEQPPPKKP--VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSIT------ 170
ED+ P + VEF AI++VNKIKTRF +Y+SFL+IL+ Y+KE S
Sbjct: 148 EDKPQVPLESDSVEFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLSTKGRPFRG 207
Query: 171 ----EVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSI 213
EV+ EV LF+ DLL EF FLP++ + P NS+
Sbjct: 208 MSEEEVFTEVANLFRGQEDLLSEFGQFLPEAKRSLFTGNGPCEMNSV 254
Score = 138 (53.6 bits), Expect = 1.1e-54, Sum P(4) = 1.1e-54
Identities = 25/70 (35%), Positives = 41/70 (58%)
Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
K PV E+A+ +++++K RF D Y FL+I+ ++ ++ V + V LF +HPD
Sbjct: 36 KLPVHVEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRVSQLFHEHPD 95
Query: 186 LLEEFTHFLP 195
L+ F FLP
Sbjct: 96 LIVGFNAFLP 105
Score = 133 (51.9 bits), Expect = 6.8e-63, Sum P(4) = 6.8e-63
Identities = 32/79 (40%), Positives = 46/79 (58%)
Query: 351 QELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGF 408
QE SF +KV+ L+ Y+ FLRC+ L+ +E+++ SEL LV LG++P+L F F
Sbjct: 306 QEFSFFDKVRRVLKSQEVYENFLRCIALFNQELVSGSELLQLVSPFLGKFPELFAQFKSF 365
Query: 409 LARCEKSEELLADVMSKKS 427
L E S A MS +S
Sbjct: 366 LGVKELS---FAPPMSDRS 381
Score = 104 (41.7 bits), Expect = 3.8e-51, Sum P(4) = 3.8e-51
Identities = 24/75 (32%), Positives = 39/75 (52%)
Query: 46 NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAG----------VIARVKELFK 95
N+A++Y+ +K F D E Y FLE++ ++ +++ T G V V LF+
Sbjct: 163 NNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLSTKGRPFRGMSEEEVFTEVANLFR 222
Query: 96 GHRDLILGFNTFLPK 110
G DL+ F FLP+
Sbjct: 223 GQEDLLSEFGQFLPE 237
Score = 85 (35.0 bits), Expect = 6.8e-63, Sum P(4) = 6.8e-63
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 498 QELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVL 535
+E+D ++C+R SYR LPK Y P S RT + EV+
Sbjct: 387 REIDYASCKRIGSSYRALPKTYQQPKCSGRTAICKEVV 424
Score = 71 (30.1 bits), Expect = 3.0e-48, Sum P(4) = 3.0e-48
Identities = 28/117 (23%), Positives = 49/117 (41%)
Query: 315 STAEPLHQGGEGDENFGMHPVSSSYDDKNAMKS---MFSQELSFCEKVKDKLRDD---YQ 368
S+ + H + ENF + + ++S F+ +S+ K+K + D Y+
Sbjct: 125 SSQDSSHNHSDCAENFKQQMLYKEDKPQVPLESDSVEFNNAISYVNKIKTRFLDHPEIYR 184
Query: 369 EFLRCLHLYTKEIIT----------RSELQSLVGDLLGRYPDLMDGFNGFLARCEKS 415
FL LH Y KE ++ E+ + V +L DL+ F FL ++S
Sbjct: 185 SFLEILHTYQKEQLSTKGRPFRGMSEEEVFTEVANLFRGQEDLLSEFGQFLPEAKRS 241
Score = 71 (30.1 bits), Expect = 1.0e-44, Sum P(4) = 1.0e-44
Identities = 19/75 (25%), Positives = 36/75 (48%)
Query: 133 EAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTH 192
+ +F +K++ R VY++FL + ++ +E S +E+ Q V P+L +F
Sbjct: 306 QEFSFFDKVR-RVLKSQEVYENFLRCIALFNQELVSGSELLQLVSPFLGKFPELFAQFKS 364
Query: 193 FLPDSSGAASIHYVP 207
FL G + + P
Sbjct: 365 FL----GVKELSFAP 375
Score = 68 (29.0 bits), Expect = 4.1e-38, Sum P(3) = 4.1e-38
Identities = 18/60 (30%), Positives = 29/60 (48%)
Query: 353 LSFCEKVKDKLRDD---YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFL 409
L++ ++VK + D Y FL + + + I + V L +PDL+ GFN FL
Sbjct: 45 LTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRVSQLFHEHPDLIVGFNAFL 104
Score = 47 (21.6 bits), Expect = 6.3e-36, Sum P(3) = 6.3e-36
Identities = 16/80 (20%), Positives = 33/80 (41%)
Query: 42 KLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLI 101
K T ++ V+ + + + E Y++FL + F + + + ++ V +L
Sbjct: 301 KYGTLQEFSFFDKVRRVLKSQ-EVYENFLRCIALFNQELVSGSELLQLVSPFLGKFPELF 359
Query: 102 LGFNTFLP-KGYEITLPLED 120
F +FL K P+ D
Sbjct: 360 AQFKSFLGVKELSFAPPMSD 379
Score = 37 (18.1 bits), Expect = 5.6e-25, Sum P(4) = 5.6e-25
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 643 PVILTRLKQKQEEW 656
P++L R Q EEW
Sbjct: 1083 PLVLLRHHQHFEEW 1096
>ASPGD|ASPL0000051511 [details] [associations]
symbol:AN1546 species:162425 "Emericella nidulans"
[GO:0032221 "Rpd3S complex" evidence=IEA] [GO:0005721 "centromeric
heterochromatin" evidence=IEA] [GO:0033698 "Rpd3L complex"
evidence=IEA] [GO:0070210 "Rpd3L-Expanded complex" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0061408 "positive regulation of transcription from RNA
polymerase II promoter in response to heat stress" evidence=IEA]
[GO:0061186 "negative regulation of chromatin silencing at silent
mating-type cassette" evidence=IEA] [GO:0030261 "chromosome
condensation" evidence=IEA] [GO:0030174 "regulation of
DNA-dependent DNA replication initiation" evidence=IEA] [GO:0030702
"chromatin silencing at centromere" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0061188 "negative regulation of
chromatin silencing at rDNA" evidence=IEA] [GO:0031939 "negative
regulation of chromatin silencing at telomere" evidence=IEA]
[GO:0000117 "regulation of transcription involved in G2/M-phase of
mitotic cell cycle" evidence=IEA] [GO:0016479 "negative regulation
of transcription from RNA polymerase I promoter" evidence=IEA]
[GO:0016575 "histone deacetylation" evidence=IEA] [GO:0006303
"double-strand break repair via nonhomologous end joining"
evidence=IEA] [GO:0051038 "negative regulation of transcription
during meiosis" evidence=IEA] InterPro:IPR003822 Pfam:PF02671
PROSITE:PS51477 GO:GO:0005634 GO:GO:0006355 EMBL:BN001307
EMBL:AACD01000025 Gene3D:1.20.1160.11 SUPFAM:SSF47762
eggNOG:COG5602 KO:K11644 OMA:NDEWASH OrthoDB:EOG4X3M8D
InterPro:IPR013194 Pfam:PF08295 SMART:SM00761 RefSeq:XP_659150.1
ProteinModelPortal:Q5BD34 SMR:Q5BD34 STRING:Q5BD34
EnsemblFungi:CADANIAT00008174 GeneID:2874883 KEGG:ani:AN1546.2
HOGENOM:HOG000158405 Uniprot:Q5BD34
Length = 1605
Score = 307 (113.1 bits), Expect = 6.1e-61, Sum P(4) = 6.1e-61
Identities = 81/225 (36%), Positives = 118/225 (52%)
Query: 483 MSMYSSKDKYL-AKPIQE---LDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDH 538
M + +DK + KP QE ++LS+C PSYRLLPK S R EL VLND
Sbjct: 802 MHVEEPEDKIVEVKPKQEPGIVNLSHCRSLGPSYRLLPKRERQKPCSGRDELCRSVLNDE 861
Query: 539 WVS-VTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNN 597
W S T SED F RKNQYE++L R E+DR + D +E+ N T + +E ++++
Sbjct: 862 WASHPTWASEDSGFVAHRKNQYEDALHRIEEDRHDYDHHIEACNRTIQLIEPIVQQFLVM 921
Query: 598 TIKTDG----PIRVEDHFTALNLRCIERLYG-DHGLDVMDVLRKNASLALPVILTRLKQK 652
T P + A+ R I+++Y G ++ + + LP++L RLKQK
Sbjct: 922 TEAERAAFQLPRGLGGQSEAIYQRVIKKIYDRQRGERIIKEMFERPCHVLPIVLFRLKQK 981
Query: 653 QEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAK 697
EEW + +++K+W E K Y +SLDH++ K D K AK
Sbjct: 982 CEEWKASQREWDKIWREQMQKAYWRSLDHQAIASKGVDKKLFVAK 1026
Score = 213 (80.0 bits), Expect = 6.1e-61, Sum P(4) = 6.1e-61
Identities = 44/74 (59%), Positives = 51/74 (68%)
Query: 47 DALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNT 106
DAL+YL VK F D+ + Y+ FL++MKDFK+Q IDT GVI RV LF GH LI GFNT
Sbjct: 277 DALSYLDQVKVRFVDQPDVYNRFLDIMKDFKSQAIDTPGVIQRVSNLFNGHPALIQGFNT 336
Query: 107 FLPKGYEITLPLED 120
FLP GY I ED
Sbjct: 337 FLPPGYRIECGTED 350
Score = 208 (78.3 bits), Expect = 6.1e-61, Sum P(4) = 6.1e-61
Identities = 42/85 (49%), Positives = 56/85 (65%)
Query: 118 LEDEQPPPKK-PVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEV 176
L+ Q K+ PVEF AI++VNKIK RF +YK FL+IL Y++E+K I +VY +V
Sbjct: 516 LQGSQADLKRGPVEFNHAISYVNKIKNRFSSRPEIYKQFLEILQTYQRESKPIGDVYTQV 575
Query: 177 EALFQDHPDLLEEFTHFLPDSSGAA 201
LF PDLLE+F FLP+S+ A
Sbjct: 576 TQLFNSAPDLLEDFKQFLPESAAHA 600
Score = 117 (46.2 bits), Expect = 2.9e-34, Sum P(3) = 2.9e-34
Identities = 22/64 (34%), Positives = 37/64 (57%)
Query: 132 EEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFT 191
++A+++++++K RF VY FLDI+ ++ + V Q V LF HP L++ F
Sbjct: 276 QDALSYLDQVKVRFVDQPDVYNRFLDIMKDFKSQAIDTPGVIQRVSNLFNGHPALIQGFN 335
Query: 192 HFLP 195
FLP
Sbjct: 336 TFLP 339
Score = 103 (41.3 bits), Expect = 8.3e-33, Sum P(3) = 8.3e-33
Identities = 20/65 (30%), Positives = 36/65 (55%)
Query: 46 NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFN 105
N A++Y+ +K+ F + E Y FLE+++ ++ + V +V +LF DL+ F
Sbjct: 531 NHAISYVNKIKNRFSSRPEIYKQFLEILQTYQRESKPIGDVYTQVTQLFNSAPDLLEDFK 590
Query: 106 TFLPK 110
FLP+
Sbjct: 591 QFLPE 595
Score = 94 (38.1 bits), Expect = 6.1e-61, Sum P(4) = 6.1e-61
Identities = 22/78 (28%), Positives = 42/78 (53%)
Query: 351 QELSFCEKVKDKL--RDDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGF 408
+E +F ++VK + + + EFL+ +LY+ ++I R L +G P+LM F F
Sbjct: 742 EEFAFFDRVKKYIGNKQTFSEFLKLCNLYSTDLIDRHVLVKRAAGYIGSNPELMAWFKRF 801
Query: 409 LARCEKSEELLADVMSKK 426
+ E+ E+ + +V K+
Sbjct: 802 M-HVEEPEDKIVEVKPKQ 818
Score = 80 (33.2 bits), Expect = 8.7e-43, Sum P(3) = 8.7e-43
Identities = 19/64 (29%), Positives = 34/64 (53%)
Query: 349 FSQELSFCEKVKDKL--RDD-YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGF 405
F+ +S+ K+K++ R + Y++FL L Y +E ++ + V L PDL++ F
Sbjct: 530 FNHAISYVNKIKNRFSSRPEIYKQFLEILQTYQRESKPIGDVYTQVTQLFNSAPDLLEDF 589
Query: 406 NGFL 409
FL
Sbjct: 590 KQFL 593
Score = 68 (29.0 bits), Expect = 1.6e-24, Sum P(2) = 1.6e-24
Identities = 20/65 (30%), Positives = 32/65 (49%)
Query: 349 FSQE-LSFCEKVKDKLRDD---YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDG 404
F Q+ LS+ ++VK + D Y FL + + + I + V +L +P L+ G
Sbjct: 274 FCQDALSYLDQVKVRFVDQPDVYNRFLDIMKDFKSQAIDTPGVIQRVSNLFNGHPALIQG 333
Query: 405 FNGFL 409
FN FL
Sbjct: 334 FNTFL 338
Score = 57 (25.1 bits), Expect = 2.2e-40, Sum P(3) = 2.2e-40
Identities = 15/76 (19%), Positives = 33/76 (43%)
Query: 123 PPPKKPV----EFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEA 178
P P +P +E F +++K ++ G+ + FL + N+Y + + +
Sbjct: 728 PEPVQPTFSLTPTQEEFAFFDRVK-KYIGNKQTFSEFLKLCNLYSTDLIDRHVLVKRAAG 786
Query: 179 LFQDHPDLLEEFTHFL 194
+P+L+ F F+
Sbjct: 787 YIGSNPELMAWFKRFM 802
Score = 49 (22.3 bits), Expect = 1.5e-22, Sum P(2) = 1.5e-22
Identities = 13/64 (20%), Positives = 28/64 (43%)
Query: 45 TNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGF 104
T + A+ VK +K + + +FL++ + ID ++ R + +L+ F
Sbjct: 740 TQEEFAFFDRVKKYIGNK-QTFSEFLKLCNLYSTDLIDRHVLVKRAAGYIGSNPELMAWF 798
Query: 105 NTFL 108
F+
Sbjct: 799 KRFM 802
Score = 40 (19.1 bits), Expect = 2.8e-26, Sum P(3) = 2.8e-26
Identities = 8/27 (29%), Positives = 12/27 (44%)
Query: 175 EVEALFQDHPDLLEEFTHFLPDSSGAA 201
+V+ F D PD+ F + D A
Sbjct: 284 QVKVRFVDQPDVYNRFLDIMKDFKSQA 310
>POMBASE|SPBC12C2.10c [details] [associations]
symbol:pst1 "Clr6 histone deacetylase complex subunit
Pst1" species:4896 "Schizosaccharomyces pombe" [GO:0003714
"transcription corepressor activity" evidence=ISO] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005721 "centromeric heterochromatin" evidence=IDA] [GO:0006338
"chromatin remodeling" evidence=ISO] [GO:0016575 "histone
deacetylation" evidence=IGI] [GO:0030261 "chromosome condensation"
evidence=IMP] [GO:0030702 "chromatin silencing at centromere"
evidence=IMP] [GO:0032221 "Rpd3S complex" evidence=IDA] [GO:0033698
"Rpd3L complex" evidence=IDA] InterPro:IPR003822 Pfam:PF02671
PROSITE:PS51477 PomBase:SPBC12C2.10c GO:GO:0003714 GO:GO:0051301
EMBL:CU329671 GO:GO:0006351 GenomeReviews:CU329671_GR GO:GO:0006338
GO:GO:0007049 GO:GO:0030702 GO:GO:0005721 GO:GO:0030261
GO:GO:0033698 GO:GO:0016575 GO:GO:0032221 Gene3D:1.20.1160.11
SUPFAM:SSF47762 EMBL:AF280407 PIR:T39371 RefSeq:NP_596012.2
ProteinModelPortal:Q09750 SMR:Q09750 DIP:DIP-29340N IntAct:Q09750
STRING:Q09750 EnsemblFungi:SPBC12C2.10c.1 GeneID:2540018
KEGG:spo:SPBC12C2.10c eggNOG:COG5602 KO:K11644 OMA:NDEWASH
OrthoDB:EOG4X3M8D NextBio:20801161 InterPro:IPR013194 Pfam:PF08295
SMART:SM00761 Uniprot:Q09750
Length = 1522
Score = 351 (128.6 bits), Expect = 9.0e-59, Sum P(4) = 9.0e-59
Identities = 89/295 (30%), Positives = 149/295 (50%)
Query: 496 PIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSV-TSGSEDYSFKHM 554
P +DL+ C+ C PSYRLLPK L+ S R +L +LND WVS T SED F
Sbjct: 584 PRPRVDLTQCKSCGPSYRLLPKIELLLPCSGRDDLCWTILNDAWVSFPTLASEDSGFIAH 643
Query: 555 RKNQYEESLFRCEDDRFELDMLLES----VNVTTKRVEELLEKINNNTIKTDGPIRVEDH 610
RKNQ+EE+L + E++R+E D + + + + +++L+ P +
Sbjct: 644 RKNQFEENLHKLEEERYEYDRHIGANMRFIELLQIHADKMLKMSEVEKANWTLPSNLGGK 703
Query: 611 FTALNLRCIERLYG-DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAE 669
++ + I+++YG +H +++ L+KN S+ +P++L RLK+K EW ++ +N++W +
Sbjct: 704 SVSIYHKVIKKVYGKEHAQQIIENLQKNPSVTIPIVLERLKKKDREWRSLQNHWNELWHD 763
Query: 670 IYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAXXXXXXXXXXXXDDVLLAIAAGNRRSIV 729
I KN+++SLDH+ FK D KS K L + + ++ G +
Sbjct: 764 IEEKNFYRSLDHQGVSFKSVDKKSTTPKFLISELRNLAQQQK------VELSEGK---VT 814
Query: 730 PHLEF--EYSDPDIHEDLYQLIKYSC--GEMCTTEQLDKVMKIWTTFLEPMLGVP 780
P +F Y DP+I D+ +L G + E +K+ +FL VP
Sbjct: 815 PSHQFLFSYKDPNIITDIARLFGVFLIHGSTHSAEDNEKMSNFLRSFLSLFFDVP 869
Score = 199 (75.1 bits), Expect = 9.0e-59, Sum P(4) = 9.0e-59
Identities = 40/80 (50%), Positives = 55/80 (68%)
Query: 41 QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDL 100
++L DAL+YL VK F + E Y++FL++MK+FK+Q I+T VI RV +LF G+ +L
Sbjct: 178 RQLNVTDALSYLDLVKLQFHQEPEIYNEFLDIMKEFKSQAIETPEVITRVSKLFAGYPNL 237
Query: 101 ILGFNTFLPKGYEITLPLED 120
I GFNTFLP GY I + D
Sbjct: 238 IQGFNTFLPPGYSIEISSAD 257
Score = 183 (69.5 bits), Expect = 9.0e-59, Sum P(4) = 9.0e-59
Identities = 36/73 (49%), Positives = 46/73 (63%)
Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
K+ + ++AINFVN +K RF Y SFLDIL Y+ + + I VY +V LF + PD
Sbjct: 344 KQAADLDQAINFVNNVKNRFSHKPEAYNSFLDILKSYQHDQRPIQLVYFQVSQLFAEAPD 403
Query: 186 LLEEFTHFLPDSS 198
LLEEF FLPD S
Sbjct: 404 LLEEFKRFLPDVS 416
Score = 124 (48.7 bits), Expect = 9.2e-37, Sum P(3) = 9.2e-37
Identities = 24/85 (28%), Positives = 46/85 (54%)
Query: 116 LPLEDEQPPPKKPVEFEE-----AINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSIT 170
+P ++ PP P E+ + A+++++ +K +F + +Y FLDI+ ++ +
Sbjct: 162 VPNQNPSAPPPPPQEYRQLNVTDALSYLDLVKLQFHQEPEIYNEFLDIMKEFKSQAIETP 221
Query: 171 EVYQEVEALFQDHPDLLEEFTHFLP 195
EV V LF +P+L++ F FLP
Sbjct: 222 EVITRVSKLFAGYPNLIQGFNTFLP 246
Score = 96 (38.9 bits), Expect = 7.5e-34, Sum P(3) = 7.5e-34
Identities = 25/90 (27%), Positives = 42/90 (46%)
Query: 41 QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDL 100
Q + A+ ++ VK+ F K E Y+ FL+++K ++ + V +V +LF DL
Sbjct: 345 QAADLDQAINFVNNVKNRFSHKPEAYNSFLDILKSYQHDQRPIQLVYFQVSQLFAEAPDL 404
Query: 101 ILGFNTFLPKGYEITLPLEDEQPPPKKPVE 130
+ F FLP + P E + P E
Sbjct: 405 LEEFKRFLPD-VSVNAPAETQDKSTVVPQE 433
Score = 79 (32.9 bits), Expect = 1.7e-30, Sum P(2) = 1.7e-30
Identities = 20/60 (33%), Positives = 31/60 (51%)
Query: 353 LSFCEKVKDKLRDD---YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFL 409
LS+ + VK + + Y EFL + + + I E+ + V L YP+L+ GFN FL
Sbjct: 186 LSYLDLVKLQFHQEPEIYNEFLDIMKEFKSQAIETPEVITRVSKLFAGYPNLIQGFNTFL 245
Score = 64 (27.6 bits), Expect = 9.0e-59, Sum P(4) = 9.0e-59
Identities = 13/38 (34%), Positives = 23/38 (60%)
Query: 352 ELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSEL 387
EL F E + L ++ Y EF++ L LY++E+ ++ L
Sbjct: 514 ELEFLEHARQYLANESKYNEFIKLLELYSQEVFDKNAL 551
Score = 58 (25.5 bits), Expect = 6.1e-44, Sum P(3) = 6.1e-44
Identities = 22/82 (26%), Positives = 34/82 (41%)
Query: 334 PVSSSYDDKNA-MKSM--FSQELSFCEKVKDKLR---DDYQEFLRCLHLYTKEIITRSEL 387
P + SY +A +K Q ++F VK++ + Y FL L Y + +
Sbjct: 331 PAAPSYPPVDASVKQAADLDQAINFVNNVKNRFSHKPEAYNSFLDILKSYQHDQRPIQLV 390
Query: 388 QSLVGDLLGRYPDLMDGFNGFL 409
V L PDL++ F FL
Sbjct: 391 YFQVSQLFAEAPDLLEEFKRFL 412
Score = 43 (20.2 bits), Expect = 9.8e-27, Sum P(2) = 9.8e-27
Identities = 14/75 (18%), Positives = 36/75 (48%)
Query: 49 LAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFL 108
L +L+ + ++ KY++F+++++ + + D ++ R F G + ++ + L
Sbjct: 515 LEFLEHARQYLANE-SKYNEFIKLLELYSQEVFDKNALVERCYVFF-GSNEHLMNWLKDL 572
Query: 109 PKGYEITLPLEDEQP 123
K Y P+ +P
Sbjct: 573 VK-YNPANPIPVPRP 586
Score = 43 (20.2 bits), Expect = 1.3e-09, Sum P(3) = 1.3e-09
Identities = 14/60 (23%), Positives = 32/60 (53%)
Query: 115 TLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKS--FLDILNMYRKENKSITEV 172
TL ED + +FEE ++ + + R++ D H+ + F+++L ++ + ++EV
Sbjct: 632 TLASEDSGFIAHRKNQFEENLHKLEE--ERYEYDRHIGANMRFIELLQIHADKMLKMSEV 689
Score = 40 (19.1 bits), Expect = 1.0e-25, Sum P(4) = 1.0e-25
Identities = 7/18 (38%), Positives = 13/18 (72%)
Query: 990 KQFKIEREEGELSPNGDF 1007
+Q K+E EG+++P+ F
Sbjct: 802 QQQKVELSEGKVTPSHQF 819
>TAIR|locus:2032397 [details] [associations]
symbol:AT1G24200 "AT1G24200" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] InterPro:IPR003822
Pfam:PF02671 PROSITE:PS51477 EMBL:CP002684 GO:GO:0005634
GO:GO:0006355 Gene3D:1.20.1160.11 SUPFAM:SSF47762 IPI:IPI00528109
RefSeq:NP_173830.1 UniGene:At.51748 ProteinModelPortal:F4I964
SMR:F4I964 EnsemblPlants:AT1G24200.1 GeneID:839034
KEGG:ath:AT1G24200 OMA:VIIRMKE Uniprot:F4I964
Length = 196
Score = 522 (188.8 bits), Expect = 2.3e-49, P = 2.3e-49
Identities = 105/156 (67%), Positives = 120/156 (76%)
Query: 40 AQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRD 99
A K TTNDAL YL+AVK FQ +REKYD+FL++M D+K QRID +GVI R+KEL K +
Sbjct: 7 AHKPTTNDALKYLRAVKAKFQGQREKYDEFLQIMIDYKTQRIDISGVIIRMKELLKEQQG 66
Query: 100 LILGFNTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDIL 159
L+LGFN FLP GY IT EQP KKPVE EAI+F+NKIKTRFQGDD VYKS LDIL
Sbjct: 67 LLLGFNAFLPNGYMIT---HHEQPSQKKPVELGEAISFINKIKTRFQGDDRVYKSVLDIL 123
Query: 160 NMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLP 195
NMYRK+ K IT VY+EV LF DH +LL EFTHFLP
Sbjct: 124 NMYRKDRKPITAVYREVAILFLDHNNLLVEFTHFLP 159
>POMBASE|SPBC1734.16c [details] [associations]
symbol:pst3 "SIN3 family co-repressor Pst3"
species:4896 "Schizosaccharomyces pombe" [GO:0000790 "nuclear
chromatin" evidence=IC] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006303 "double-strand break repair via
nonhomologous end joining" evidence=ISO] [GO:0006338 "chromatin
remodeling" evidence=NAS] [GO:0006342 "chromatin silencing"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IC] [GO:0016575 "histone deacetylation"
evidence=IC] [GO:0032221 "Rpd3S complex" evidence=IDA] [GO:0070210
"Rpd3L-Expanded complex" evidence=IDA] InterPro:IPR003822
Pfam:PF02671 PROSITE:PS51477 PomBase:SPBC1734.16c GO:GO:0005829
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0006338 GO:GO:0006342
GO:GO:0070210 GO:GO:0006303 GO:GO:0016575 GO:GO:0032221
Gene3D:1.20.1160.11 SUPFAM:SSF47762 eggNOG:COG5602
InterPro:IPR013194 Pfam:PF08295 SMART:SM00761 PIR:T39663
RefSeq:NP_595433.1 ProteinModelPortal:O74755 SMR:O74755
STRING:O74755 EnsemblFungi:SPBC1734.16c.1 GeneID:2539793
KEGG:spo:SPBC1734.16c OMA:NILNICE OrthoDB:EOG4NGKXP
NextBio:20800942 Uniprot:O74755
Length = 1154
Score = 232 (86.7 bits), Expect = 6.8e-47, Sum P(4) = 6.8e-47
Identities = 45/77 (58%), Positives = 58/77 (75%)
Query: 43 LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
L NDAL+YL+ VK F ++RE Y+ FLE+M+DFK+Q +DT GVI RV ELF G+ LI
Sbjct: 113 LDVNDALSYLELVKYYFSERREIYNRFLEIMRDFKSQALDTLGVINRVSELFNGYPQLIE 172
Query: 103 GFNTFLPKGYEITLPLE 119
GFNTFLP GY+I + L+
Sbjct: 173 GFNTFLPSGYKIEVQLD 189
Score = 206 (77.6 bits), Expect = 6.8e-47, Sum P(4) = 6.8e-47
Identities = 56/204 (27%), Positives = 99/204 (48%)
Query: 495 KPIQE-LDLSNCERCTP-SYRLLPKNYLIPSASQRTELGAEVLNDHWVSVT-SGSEDYSF 551
+P+ E + L C +YR LP ++ S R +L VLND ++SV S +
Sbjct: 481 EPVDERVYLPETFECISLTYRKLPDSWKQDKCSGRDDLDNSVLNDDYISVAPKPSHVKNI 540
Query: 552 KHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF 611
H +NQY ++L ED+R++ D +L + K + E + ++T ++ +
Sbjct: 541 MH-HENQYLQALQLVEDERYDYDRVLNTTESAIKILANFCEPTIHEHLET--ALQELERS 597
Query: 612 TALNLRCIERLYG-DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEI 670
+ + +YG +H +D L K A PV+L R+K K +EW R + +++K+W +I
Sbjct: 598 KRIIKNALIIVYGKEHANLALDTLFKKLPTAAPVLLKRIKTKDQEWRRSKREWSKIWRQI 657
Query: 671 YSKNYHKSLDHRSFYFKQQDSKSL 694
KN + D R + +D + L
Sbjct: 658 EKKNAQAAFDDRYCRIEGRDRRGL 681
Score = 179 (68.1 bits), Expect = 6.8e-47, Sum P(4) = 6.8e-47
Identities = 44/123 (35%), Positives = 65/123 (52%)
Query: 126 KKP-VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHP 184
+KP V+F AI ++NK+K R+ + Y FL +L Y+K KSI EV V +F+D P
Sbjct: 250 EKPRVDFNYAIAYMNKVKARYPPNSDTYMEFLGVLRTYQKAQKSIFEVRARVAEIFKDSP 309
Query: 185 DLLEEFTHFLPDS--SGAASIHYVPSGRNSILRDRSSAMPTARQVHVDKKERAMASHADR 242
DLLEEF FLPD+ S S V N + + ++P + V + A ++ R
Sbjct: 310 DLLEEFKLFLPDNVDSTEPSTPNVQKSPNRLPPVGNFSLPPSAPVREKRNRPAHSAQISR 369
Query: 243 DLS 245
+S
Sbjct: 370 SIS 372
Score = 110 (43.8 bits), Expect = 1.0e-21, Sum P(3) = 1.0e-21
Identities = 26/100 (26%), Positives = 48/100 (48%)
Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDL 186
+P++ +A++++ +K F +Y FL+I+ ++ + V V LF +P L
Sbjct: 111 RPLDVNDALSYLELVKYYFSERREIYNRFLEIMRDFKSQALDTLGVINRVSELFNGYPQL 170
Query: 187 LEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQ 226
+E F FLP SG + S S++R + P +Q
Sbjct: 171 IEGFNTFLP--SGYKIEVQLDSSNTSVVRVGTPMHPLPQQ 208
Score = 107 (42.7 bits), Expect = 4.4e-20, Sum P(3) = 4.4e-20
Identities = 32/98 (32%), Positives = 48/98 (48%)
Query: 21 SRGEPSGQTQVVXXXXXXXAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDF-KAQ 79
S+ +PS V ++ N A+AY+ VK + + Y +FL V++ + KAQ
Sbjct: 234 SQPQPSAPNLV--SSTENEKPRVDFNYAIAYMNKVKARYPPNSDTYMEFLGVLRTYQKAQ 291
Query: 80 RIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLP 117
+ V ARV E+FK DL+ F FLP + T P
Sbjct: 292 K-SIFEVRARVAEIFKDSPDLLEEFKLFLPDNVDSTEP 328
Score = 80 (33.2 bits), Expect = 1.8e-34, Sum P(3) = 1.8e-34
Identities = 24/78 (30%), Positives = 41/78 (52%)
Query: 335 VSSSYDDKNAMKSMFSQELSFCEKVKDKL---RDDYQEFLRCLHLYTKEIITRSELQSLV 391
VSS+ ++K + F+ +++ KVK + D Y EFL L Y K + E+++ V
Sbjct: 244 VSSTENEKPRVD--FNYAIAYMNKVKARYPPNSDTYMEFLGVLRTYQKAQKSIFEVRARV 301
Query: 392 GDLLGRYPDLMDGFNGFL 409
++ PDL++ F FL
Sbjct: 302 AEIFKDSPDLLEEFKLFL 319
Score = 78 (32.5 bits), Expect = 4.2e-15, Sum P(2) = 4.2e-15
Identities = 21/67 (31%), Positives = 33/67 (49%)
Query: 353 LSFCEKVK---DKLRDDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFL 409
LS+ E VK + R+ Y FL + + + + + + V +L YP L++GFN FL
Sbjct: 119 LSYLELVKYYFSERREIYNRFLEIMRDFKSQALDTLGVINRVSELFNGYPQLIEGFNTFL 178
Query: 410 ARCEKSE 416
K E
Sbjct: 179 PSGYKIE 185
Score = 67 (28.6 bits), Expect = 6.8e-47, Sum P(4) = 6.8e-47
Identities = 25/109 (22%), Positives = 48/109 (44%)
Query: 304 HKRKSARKIEDSTAEPLHQGGEGDEN-FGMHPVSSSYDDKNAMKSMFSQELSFCEKVKDK 362
H + +R I T+ Q E N + +H + + +EL ++
Sbjct: 363 HSAQISRSIS-KTSRMYRQTAEEPLNSYSLHVYPQKITAPTSPYAATQEELLAFTTIRQH 421
Query: 363 LRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFL 409
L D + +FL LHLY ++++ ++EL + L+ R +L F+ F+
Sbjct: 422 LPDTLAFHKFLELLHLYREKLLDKTELLNSFSKLV-RNDNLTLWFSEFI 469
Score = 53 (23.7 bits), Expect = 2.7e-15, Sum P(2) = 2.7e-15
Identities = 27/120 (22%), Positives = 49/120 (40%)
Query: 132 EEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFT 191
EE + F I+ D + FL++L++YR++ TE+ L ++ +L F+
Sbjct: 410 EELLAFTT-IRQHLP-DTLAFHKFLELLHLYREKLLDKTELLNSFSKLVRND-NLTLWFS 466
Query: 192 HFLPDSSGAASIHYVPSGRNSILRDRSSAMP-TARQVHVDKKERAMASHADRDLSVDRPD 250
F+ S + P L + + T R++ K+ + D D SV D
Sbjct: 467 EFIRWSDNPILVKNEPVDERVYLPETFECISLTYRKLPDSWKQDKCSGRDDLDNSVLNDD 526
>TAIR|locus:2020603 [details] [associations]
symbol:AT1G70030 "AT1G70030" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] InterPro:IPR003822
Pfam:PF02671 PROSITE:PS51477 EMBL:CP002684 GO:GO:0005634
GO:GO:0006355 Gene3D:1.20.1160.11 SUPFAM:SSF47762 HSSP:Q62141
EMBL:BT006143 EMBL:BT008545 EMBL:AK229700 IPI:IPI00521746
RefSeq:NP_177161.2 UniGene:At.35350 ProteinModelPortal:Q84R24
SMR:Q84R24 EnsemblPlants:AT1G70030.1 GeneID:843340
KEGG:ath:AT1G70030 TAIR:At1g70030 InParanoid:Q84R24 OMA:EVAILFQ
PhylomeDB:Q84R24 ProtClustDB:CLSN2682381 ArrayExpress:Q84R24
Genevestigator:Q84R24 Uniprot:Q84R24
Length = 160
Score = 456 (165.6 bits), Expect = 3.2e-42, P = 3.2e-42
Identities = 92/155 (59%), Positives = 113/155 (72%)
Query: 41 QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDL 100
+KLTT DAL +L VK +QD RE YD FL +MKDF+ QR T VI++VKELFKG +L
Sbjct: 5 KKLTTTDALDFLHLVKTKYQDNREIYDSFLTIMKDFRGQRAKTCDVISKVKELFKGQPEL 64
Query: 101 ILGFNTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILN 160
+LGFNTFLP G+EITL +DE K F+EA FVNK+KTRFQ +D V+ SFL++L
Sbjct: 65 LLGFNTFLPTGFEITLS-DDELTSNSKFAHFDEAYEFVNKVKTRFQNND-VFNSFLEVLK 122
Query: 161 MYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLP 195
++KENKS+ E+YQEV LFQ H DLLEEF FLP
Sbjct: 123 THKKENKSVAELYQEVAILFQGHRDLLEEFHLFLP 157
>POMBASE|SPAC23C11.15 [details] [associations]
symbol:pst2 "Clr6 histone deacetylase complex subunit
Pst2" species:4896 "Schizosaccharomyces pombe" [GO:0003714
"transcription corepressor activity" evidence=ISO] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=IC] [GO:0006342
"chromatin silencing" evidence=ISO] [GO:0016575 "histone
deacetylation" evidence=IMP] [GO:0030261 "chromosome condensation"
evidence=IMP] [GO:0032221 "Rpd3S complex" evidence=IDA]
InterPro:IPR003822 Pfam:PF02671 PROSITE:PS51477
PomBase:SPAC23C11.15 GO:GO:0003714 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0006351 GO:GO:0006338 GO:GO:0006342
GO:GO:0030261 GO:GO:0016575 GO:GO:0032221 Gene3D:1.20.1160.11
SUPFAM:SSF47762 eggNOG:COG5602 InterPro:IPR013194 Pfam:PF08295
SMART:SM00761 PIR:T38253 RefSeq:NP_593646.1
ProteinModelPortal:O13919 DIP:DIP-29341N IntAct:O13919
STRING:O13919 EnsemblFungi:SPAC23C11.15.1 GeneID:2541624
KEGG:spo:SPAC23C11.15 OMA:WITTANT OrthoDB:EOG454D8N
NextBio:20802717 Uniprot:O13919
Length = 1075
Score = 289 (106.8 bits), Expect = 6.4e-33, Sum P(4) = 6.4e-33
Identities = 71/226 (31%), Positives = 120/226 (53%)
Query: 483 MSMYS-SKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS 541
+S+ S S +++L+ + S+ C PSYRLLP S S R + +LND WVS
Sbjct: 313 LSLTSLSPEEFLS--VYNSACSDFPECGPSYRLLPVEERNISCSGRDDFAWGILNDDWVS 370
Query: 542 -VTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIK 600
T SE+ F RK YEE++ + E++R+E D +E+ + T K ++++ +IN +
Sbjct: 371 HPTWASEESGFIVQRKTPYEEAMTKLEEERYEFDRHIEATSWTIKSLKKIQNRINELPEE 430
Query: 601 TDGPIRVEDHF----TALNLRCIERLY-GDHGLDVMDVLRKNASLALPVILTRLKQKQEE 655
+E+ ++ + I+ +Y +H ++ L + L LP++++RL++K EE
Sbjct: 431 ERETYTLEEGLGLPSKSIYKKTIKLVYTSEHAEEMFKALERMPCLTLPLVISRLEEKNEE 490
Query: 656 WARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSA 701
W + W I KNY KSLD + YFK +D K++ +K L A
Sbjct: 491 WKSVKRSLQPGWRSIEFKNYDKSLDSQCVYFKARDKKNVSSKFLLA 536
Score = 101 (40.6 bits), Expect = 6.4e-33, Sum P(4) = 6.4e-33
Identities = 20/70 (28%), Positives = 35/70 (50%)
Query: 128 PVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLL 187
P + AI FV++++ + + D L ++ S++E+ V +L +HP L
Sbjct: 139 PCTYHRAIGFVSRVRRALLSNPEQFFKLQDSLRKFKNSECSLSELQTIVTSLLAEHPSLA 198
Query: 188 EEFTHFLPDS 197
EF +FLP S
Sbjct: 199 HEFHNFLPSS 208
Score = 94 (38.1 bits), Expect = 1.8e-28, Sum P(3) = 1.8e-28
Identities = 19/61 (31%), Positives = 30/61 (49%)
Query: 137 FVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLPD 196
FV K+ R +VY +F+D++ E + + + +D+PDLLE FLP
Sbjct: 42 FVQKLGQRLCHRPYVYSAFMDVVKALHNEIVDFPGFIERISVILRDYPDLLEYLNIFLPS 101
Query: 197 S 197
S
Sbjct: 102 S 102
Score = 80 (33.2 bits), Expect = 6.4e-33, Sum P(4) = 6.4e-33
Identities = 16/51 (31%), Positives = 27/51 (52%)
Query: 66 YDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITL 116
Y F++V+K + +D G I R+ + + + DL+ N FLP Y+ L
Sbjct: 57 YSAFMDVVKALHNEIVDFPGFIERISVILRDYPDLLEYLNIFLPSSYKYLL 107
Score = 73 (30.8 bits), Expect = 6.4e-33, Sum P(4) = 6.4e-33
Identities = 24/58 (41%), Positives = 32/58 (55%)
Query: 335 VSSSYDDKNAMKSMFSQELS-FCEKVKDKLRD--DYQEFLRCLHLYTKEIITRSELQS 389
+S S D + S S E S F + VK+ L D Y EFL+ L+LY + II R+ L S
Sbjct: 239 LSQSRPDNLSPFSHLSNESSDFFKNVKNVLTDVETYHEFLKLLNLYVQGIIDRNILVS 296
Score = 73 (30.8 bits), Expect = 1.8e-28, Sum P(3) = 1.8e-28
Identities = 23/82 (28%), Positives = 40/82 (48%)
Query: 334 PVS--SSY-DDKNAMKSMFSQELSFCEKVKDKLRDDYQEFLRC---LHLYTKEIITRSEL 387
PVS S+Y N + + + + F +V+ L + ++F + L + + SEL
Sbjct: 124 PVSTPSTYVATYNDLPCTYHRAIGFVSRVRRALLSNPEQFFKLQDSLRKFKNSECSLSEL 183
Query: 388 QSLVGDLLGRYPDLMDGFNGFL 409
Q++V LL +P L F+ FL
Sbjct: 184 QTIVTSLLAEHPSLAHEFHNFL 205
Score = 49 (22.3 bits), Expect = 8.0e-24, Sum P(3) = 8.0e-24
Identities = 14/66 (21%), Positives = 27/66 (40%)
Query: 44 TTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILG 103
T + A+ ++ V+ E++ + ++ FK + + V L H L
Sbjct: 141 TYHRAIGFVSRVRRALLSNPEQFFKLQDSLRKFKNSECSLSELQTIVTSLLAEHPSLAHE 200
Query: 104 FNTFLP 109
F+ FLP
Sbjct: 201 FHNFLP 206
Score = 49 (22.3 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 15/46 (32%), Positives = 26/46 (56%)
Query: 195 PDSSGAASIHYVPSGRNSILRDRSSAMPTARQVH--VDKKERAMAS 238
P ++ AS+ Y PS +S+L + A T ++H VDK++ +S
Sbjct: 704 PAAAIKASLKY-PSHPDSLLEHQDHAGDTENEMHDDVDKEQFGYSS 748
Score = 46 (21.3 bits), Expect = 8.7e-21, Sum P(2) = 8.7e-21
Identities = 12/43 (27%), Positives = 19/43 (44%)
Query: 367 YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFL 409
Y F+ + EI+ + +L YPDL++ N FL
Sbjct: 57 YSAFMDVVKALHNEIVDFPGFIERISVILRDYPDLLEYLNIFL 99
Score = 45 (20.9 bits), Expect = 3.9e-24, Sum P(3) = 3.9e-24
Identities = 13/47 (27%), Positives = 19/47 (40%)
Query: 118 LEDEQPPPKKPVEF--EEAINFVNKIKTRFQGDDHVYKSFLDILNMY 162
L +P P E+ +F +K D Y FL +LN+Y
Sbjct: 239 LSQSRPDNLSPFSHLSNESSDFFKNVKNVLT-DVETYHEFLKLLNLY 284
Score = 42 (19.8 bits), Expect = 8.0e-24, Sum P(3) = 8.0e-24
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 177 EALFQDHPDLLEEFTHFLPDSS 198
+ L Q PD L F+H +SS
Sbjct: 237 DLLSQSRPDNLSPFSHLSNESS 258
>TAIR|locus:2032442 [details] [associations]
symbol:AT1G24230 "AT1G24230" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] InterPro:IPR003822
Pfam:PF02671 PROSITE:PS51477 EMBL:CP002684 GO:GO:0005634
GO:GO:0006355 Gene3D:1.20.1160.11 SUPFAM:SSF47762 eggNOG:COG5602
EMBL:BT031359 IPI:IPI00548571 RefSeq:NP_173833.1 UniGene:At.49912
ProteinModelPortal:B2GVM8 SMR:B2GVM8 DNASU:839037
EnsemblPlants:AT1G24230.1 GeneID:839037 KEGG:ath:AT1G24230
TAIR:At1g24230 PhylomeDB:B2GVM8 Genevestigator:B2GVM8
Uniprot:B2GVM8
Length = 245
Score = 361 (132.1 bits), Expect = 5.3e-32, P = 5.3e-32
Identities = 78/177 (44%), Positives = 113/177 (63%)
Query: 42 KLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLI 101
K T +D +Y+ ++K+ F+D+ KY FLE++ D+ A+R+D +AR+ EL K HR+L+
Sbjct: 81 KETFHDVRSYIYSLKESFRDEPAKYAQFLEILNDYSARRVDAPSAVARMTELMKDHRNLV 140
Query: 102 LGFNTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDD-HVYKSFLDILN 160
LGF+ L G T PLE E P K + NF++K+K RFQG+D HVY+SFL+IL
Sbjct: 141 LGFSVLLSTGDTKTTPLEAE-PDNNKRIR---VANFISKLKARFQGNDGHVYESFLEILT 196
Query: 161 MYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDR 217
MY++ NKS+ ++YQEV AL Q H DL+ EF++ ++G PSG S RDR
Sbjct: 197 MYQQGNKSVNDLYQEVVALLQGHEDLVMEFSNVFKRTTG-------PSGSKSA-RDR 245
Score = 193 (73.0 bits), Expect = 4.6e-16, Sum P(2) = 4.6e-16
Identities = 48/152 (31%), Positives = 78/152 (51%)
Query: 44 TTNDALAYLKAVKDIF-QDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
T ++A +Y+ AVK+ F D+ KY +FL++M D +A R+D A V+ R++EL K H +L+L
Sbjct: 11 TIDEATSYINAVKEAFGADQPAKYREFLDIMLDLRANRVDLATVVPRMRELLKDHVNLLL 70
Query: 103 GFNTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMY 162
FN FLP + T F + +++ +K F+ + Y FL+ILN Y
Sbjct: 71 RFNAFLPAEAKET---------------FHDVRSYIYSLKESFRDEPAKYAQFLEILNDY 115
Query: 163 RKENKSITEVYQEVEALFQDHPDLLEEFTHFL 194
+ L +DH +L+ F+ L
Sbjct: 116 SARRVDAPSAVARMTELMKDHRNLVLGFSVLL 147
Score = 102 (41.0 bits), Expect = 0.00077, Sum P(2) = 0.00077
Identities = 25/78 (32%), Positives = 38/78 (48%)
Query: 132 EEAINFVNKIKTRFQGDDHV-YKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEF 190
+EA +++N +K F D Y+ FLDI+ R + V + L +DH +LL F
Sbjct: 13 DEATSYINAVKEAFGADQPAKYREFLDIMLDLRANRVDLATVVPRMRELLKDHVNLLLRF 72
Query: 191 THFLPDSSGAASIHYVPS 208
FLP + + H V S
Sbjct: 73 NAFLP-AEAKETFHDVRS 89
Score = 57 (25.1 bits), Expect = 0.00077, Sum P(2) = 0.00077
Identities = 20/87 (22%), Positives = 42/87 (48%)
Query: 346 KSMFSQELSFCEKVKDKLRDD---YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLM 402
K F S+ +K+ RD+ Y +FL L+ Y+ + + + +L+ + +L+
Sbjct: 81 KETFHDVRSYIYSLKESFRDEPAKYAQFLEILNDYSARRVDAPSAVARMTELMKDHRNLV 140
Query: 403 DGFNGFLARCE-KSEELLADVMSKKSL 428
GF+ L+ + K+ L A+ + K +
Sbjct: 141 LGFSVLLSTGDTKTTPLEAEPDNNKRI 167
Score = 45 (20.9 bits), Expect = 4.6e-16, Sum P(2) = 4.6e-16
Identities = 16/62 (25%), Positives = 30/62 (48%)
Query: 354 SFCEKVKDKLRDD----YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFL 409
+F K+K + + + Y+ FL L +Y + + ++L V LL + DL+ F+
Sbjct: 171 NFISKLKARFQGNDGHVYESFLEILTMYQQGNKSVNDLYQEVVALLQGHEDLVMEFSNVF 230
Query: 410 AR 411
R
Sbjct: 231 KR 232
>TAIR|locus:2165887 [details] [associations]
symbol:AT5G35610 "AT5G35610" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] InterPro:IPR003822
Pfam:PF02671 PROSITE:PS51477 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006355 EMBL:AB013393
Gene3D:1.20.1160.11 SUPFAM:SSF47762 eggNOG:COG5602 IPI:IPI00519565
RefSeq:NP_198411.1 UniGene:At.55139 ProteinModelPortal:Q9FJS7
SMR:Q9FJS7 EnsemblPlants:AT5G35610.1 GeneID:833533
KEGG:ath:AT5G35610 TAIR:At5g35610 HOGENOM:HOG000147073
InParanoid:Q9FJS7 OMA:DIEYSEA PhylomeDB:Q9FJS7
Genevestigator:Q9FJS7 Uniprot:Q9FJS7
Length = 155
Score = 325 (119.5 bits), Expect = 3.8e-28, P = 3.8e-28
Identities = 74/148 (50%), Positives = 100/148 (67%)
Query: 40 AQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRD 99
A K+T ++ YLK VK+ Q+KRE Y FL+VM + AQRID +GV + VKELFK ++
Sbjct: 3 ASKITKSNPRKYLKIVKNKLQNKREIYVRFLQVMTAYSAQRIDPSGVKSVVKELFKEDQE 62
Query: 100 LILGFNTFLPKGYEIT---------LPLEDEQPPPKK--PVEFEEAINFVNKIKTRFQGD 148
I GFNTFLPKG+EI + LE EQ PPKK +E+ EA++FV K+K D
Sbjct: 63 PISGFNTFLPKGFEIKPECDQNGFKIKLECEQTPPKKYVDIEYSEALDFVRKVKD----D 118
Query: 149 DHVYKSFLDILNMYRKENKSITEVYQEV 176
D +YKSF+ I++MY+K+NKS+ EV +EV
Sbjct: 119 DRIYKSFVTIMDMYKKKNKSLDEVCREV 146
>UNIPROTKB|O01319 [details] [associations]
symbol:sin-3 "Protein SIN-3, isoform a" species:6239
"Caenorhabditis elegans" [GO:0016575 "histone deacetylation"
evidence=IDA] InterPro:IPR003822 Pfam:PF02671 PROSITE:PS51477
GO:GO:0005634 GO:GO:0001708 GO:GO:0016246 GO:GO:0006355
GO:GO:0040011 GO:GO:0006974 GO:GO:0045138 GO:GO:0040025
GO:GO:0040027 GO:GO:0016575 Gene3D:1.20.1160.11 SUPFAM:SSF47762
EMBL:Z81494 KO:K11644 InterPro:IPR013194 Pfam:PF08295 SMART:SM00761
GeneTree:ENSGT00390000007239 UniGene:Cel.18986 GeneID:172628
KEGG:cel:CELE_F02E9.4 UCSC:F02E9.4b CTD:172628 NextBio:876327
PIR:T20513 RefSeq:NP_492284.2 ProteinModelPortal:O01319 SMR:O01319
STRING:O01319 EnsemblMetazoa:F02E9.4a WormBase:F02E9.4a
ArrayExpress:O01319 Uniprot:O01319
Length = 1505
Score = 215 (80.7 bits), Expect = 5.5e-28, Sum P(2) = 5.5e-28
Identities = 61/237 (25%), Positives = 114/237 (48%)
Query: 473 AFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGA 532
A + KD+ +D+ + + ++ ++ + PSYR + K+ S R EL
Sbjct: 766 AVMRKDLPAIQPKRGLRDQKMLQQVKNVEAATVCTLGPSYRFM-KDTKATDCSGRVELDD 824
Query: 533 E---VLNDHWVSVTS-GSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVE 588
+ VLND W S+ S SED + ++K+ EE F+ ED+R+ELD++++S +++
Sbjct: 825 DLKGVLNDTWTSIPSWSSEDTGSQAIKKSNLEEFHFKTEDERYELDIIVDSNRTVIEQLS 884
Query: 589 ELL---EKINNN---TIKTDGPIRVEDHFTALNLRCIERLYGDHGLDVMDVLRKNASLAL 642
+ L E +++ + K D + T + R + +++ + D +D +KN + L
Sbjct: 885 KTLRDYEAMSDEDKKSFKLDKWLNASSRSTTI--RVLAKVFTNSAQDFIDAAQKNPLVGL 942
Query: 643 PVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKAL 699
IL LK+K W+R + D N+ W + K + + K D K+ +K L
Sbjct: 943 RRILESLKEKDLLWSRFQQDTNRTWRDALDKQMSAATTILNNQHKNYDQKAFKSKPL 999
Score = 195 (73.7 bits), Expect = 5.5e-28, Sum P(2) = 5.5e-28
Identities = 39/71 (54%), Positives = 49/71 (69%)
Query: 46 NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFN 105
++ALAYL+ +K F Y FLE+MKDF+AQRI+T VI +V EL +L+LGFN
Sbjct: 287 DEALAYLRVIKSTFSSDVPVYHRFLEIMKDFRAQRIETPDVIEQVAELLYDSPELVLGFN 346
Query: 106 TFLPKGYEITL 116
TFLP GY ITL
Sbjct: 347 TFLPTGYRITL 357
Score = 116 (45.9 bits), Expect = 9.9e-20, Sum P(2) = 9.9e-20
Identities = 24/71 (33%), Positives = 39/71 (54%)
Query: 125 PKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHP 184
P+ P +EA+ ++ IK+ F D VY FL+I+ +R + +V ++V L D P
Sbjct: 280 PEGPPRVDEALAYLRVIKSTFSSDVPVYHRFLEIMKDFRAQRIETPDVIEQVAELLYDSP 339
Query: 185 DLLEEFTHFLP 195
+L+ F FLP
Sbjct: 340 ELVLGFNTFLP 350
Score = 60 (26.2 bits), Expect = 7.6e-13, Sum P(3) = 7.6e-13
Identities = 17/62 (27%), Positives = 29/62 (46%)
Query: 351 QELSFCEKVKDKLRDD---YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNG 407
+ L++ +K D Y FL + + + I ++ V +LL P+L+ GFN
Sbjct: 288 EALAYLRVIKSTFSSDVPVYHRFLEIMKDFRAQRIETPDVIEQVAELLYDSPELVLGFNT 347
Query: 408 FL 409
FL
Sbjct: 348 FL 349
Score = 45 (20.9 bits), Expect = 3.2e-10, Sum P(2) = 3.2e-10
Identities = 20/91 (21%), Positives = 42/91 (46%)
Query: 565 RCEDDRFELDMLLESVNVTTKRVEELLEKINNNTI-KTDGPIRVEDHF-TALNLRCIERL 622
+C+ DR ++ + + + +++ ++N I K G + +++ T LN+ R+
Sbjct: 1051 KCDRDRTKIVLFRILMEWLCQEGQQVQIDLDNGEIFKFQGDLNEDENLMTLLNMDG-RRI 1109
Query: 623 YGDHGLDVMDVLRKNASLALPVILTRLKQKQ 653
GD + V L N S ++ L QK+
Sbjct: 1110 CGDRVVPVSTSLESNES-SIDHFSENLHQKR 1139
Score = 43 (20.2 bits), Expect = 5.0e-09, Sum P(3) = 5.0e-09
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 566 CEDDRFELDMLLESVNVTTKRVEELLEK 593
CED + E++M E + T + ELL+K
Sbjct: 468 CEDSQQEIEMSSE-LAAHTLNIIELLKK 494
Score = 38 (18.4 bits), Expect = 7.6e-13, Sum P(3) = 7.6e-13
Identities = 7/24 (29%), Positives = 14/24 (58%)
Query: 121 EQPPPKKPVEFEEAINFVNKIKTR 144
+Q P +P+ ++A+N N T+
Sbjct: 178 QQSPLIRPIPQQQALNIQNLTSTQ 201
Score = 38 (18.4 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 23/101 (22%), Positives = 46/101 (45%)
Query: 131 FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALF-QDHPDLLEE 189
F E ++ + + F GDD VY I+ + + ++ +A++ Q+H D ++
Sbjct: 1131 FSENLH-QKRTRRTFYGDDSVYM----IIRYHHMIQERFAKILS-TQAIYAQEHFDNQKK 1184
Query: 190 FTHFLPDSSGAASIHYVPSGRNSI---LRDRSSAMPTARQV 227
+ D GA +H GR ++ ++ R +A+ R V
Sbjct: 1185 NKRW-EDGIGA-DMH----GRKALQENIKQRRAAVNDIRNV 1219
Score = 38 (18.4 bits), Expect = 5.0e-09, Sum P(3) = 5.0e-09
Identities = 6/15 (40%), Positives = 10/15 (66%)
Query: 671 YSKNYHKSLDHRSFY 685
+S+N H+ R+FY
Sbjct: 1131 FSENLHQKRTRRTFY 1145
Score = 37 (18.1 bits), Expect = 2.0e-08, Sum P(3) = 2.0e-08
Identities = 7/18 (38%), Positives = 13/18 (72%)
Query: 144 RFQGDDHVYKSFLDILNM 161
+FQGD + ++ + +LNM
Sbjct: 1087 KFQGDLNEDENLMTLLNM 1104
>WB|WBGene00004117 [details] [associations]
symbol:sin-3 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IMP] [GO:0016246 "RNA
interference" evidence=IMP] [GO:0040027 "negative regulation of
vulval development" evidence=IMP] [GO:0045138 "tail tip
morphogenesis" evidence=IGI;IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0040025 "vulval development" evidence=IMP]
[GO:0004407 "histone deacetylase activity" evidence=IDA]
[GO:0001708 "cell fate specification" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR003822 Pfam:PF02671
PROSITE:PS51477 GO:GO:0005634 GO:GO:0001708 GO:GO:0016246
GO:GO:0006355 GO:GO:0040011 GO:GO:0006974 GO:GO:0045138
GO:GO:0040025 GO:GO:0040027 GO:GO:0016575 Gene3D:1.20.1160.11
SUPFAM:SSF47762 EMBL:Z81494 eggNOG:COG5602 KO:K11644
InterPro:IPR013194 Pfam:PF08295 SMART:SM00761
GeneTree:ENSGT00390000007239 RefSeq:NP_001122442.1
UniGene:Cel.18986 ProteinModelPortal:A5JYW9 SMR:A5JYW9
IntAct:A5JYW9 STRING:A5JYW9 PaxDb:A5JYW9 EnsemblMetazoa:F02E9.4b
GeneID:172628 KEGG:cel:CELE_F02E9.4 UCSC:F02E9.4b CTD:172628
WormBase:F02E9.4b InParanoid:A5JYW9 OMA:ILMEWLC NextBio:876327
ArrayExpress:A5JYW9 Uniprot:A5JYW9
Length = 1507
Score = 215 (80.7 bits), Expect = 5.6e-28, Sum P(2) = 5.6e-28
Identities = 61/237 (25%), Positives = 114/237 (48%)
Query: 473 AFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGA 532
A + KD+ +D+ + + ++ ++ + PSYR + K+ S R EL
Sbjct: 766 AVMRKDLPAIQPKRGLRDQKMLQQVKNVEAATVCTLGPSYRFM-KDTKATDCSGRVELDD 824
Query: 533 E---VLNDHWVSVTS-GSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVE 588
+ VLND W S+ S SED + ++K+ EE F+ ED+R+ELD++++S +++
Sbjct: 825 DLKGVLNDTWTSIPSWSSEDTGSQAIKKSNLEEFHFKTEDERYELDIIVDSNRTVIEQLS 884
Query: 589 ELL---EKINNN---TIKTDGPIRVEDHFTALNLRCIERLYGDHGLDVMDVLRKNASLAL 642
+ L E +++ + K D + T + R + +++ + D +D +KN + L
Sbjct: 885 KTLRDYEAMSDEDKKSFKLDKWLNASSRSTTI--RVLAKVFTNSAQDFIDAAQKNPLVGL 942
Query: 643 PVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKAL 699
IL LK+K W+R + D N+ W + K + + K D K+ +K L
Sbjct: 943 RRILESLKEKDLLWSRFQQDTNRTWRDALDKQMSAATTILNNQHKNYDQKAFKSKPL 999
Score = 195 (73.7 bits), Expect = 5.6e-28, Sum P(2) = 5.6e-28
Identities = 39/71 (54%), Positives = 49/71 (69%)
Query: 46 NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFN 105
++ALAYL+ +K F Y FLE+MKDF+AQRI+T VI +V EL +L+LGFN
Sbjct: 287 DEALAYLRVIKSTFSSDVPVYHRFLEIMKDFRAQRIETPDVIEQVAELLYDSPELVLGFN 346
Query: 106 TFLPKGYEITL 116
TFLP GY ITL
Sbjct: 347 TFLPTGYRITL 357
Score = 116 (45.9 bits), Expect = 9.9e-20, Sum P(2) = 9.9e-20
Identities = 24/71 (33%), Positives = 39/71 (54%)
Query: 125 PKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHP 184
P+ P +EA+ ++ IK+ F D VY FL+I+ +R + +V ++V L D P
Sbjct: 280 PEGPPRVDEALAYLRVIKSTFSSDVPVYHRFLEIMKDFRAQRIETPDVIEQVAELLYDSP 339
Query: 185 DLLEEFTHFLP 195
+L+ F FLP
Sbjct: 340 ELVLGFNTFLP 350
Score = 60 (26.2 bits), Expect = 7.7e-13, Sum P(3) = 7.7e-13
Identities = 17/62 (27%), Positives = 29/62 (46%)
Query: 351 QELSFCEKVKDKLRDD---YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNG 407
+ L++ +K D Y FL + + + I ++ V +LL P+L+ GFN
Sbjct: 288 EALAYLRVIKSTFSSDVPVYHRFLEIMKDFRAQRIETPDVIEQVAELLYDSPELVLGFNT 347
Query: 408 FL 409
FL
Sbjct: 348 FL 349
Score = 45 (20.9 bits), Expect = 3.2e-09, Sum P(3) = 3.2e-09
Identities = 24/95 (25%), Positives = 43/95 (45%)
Query: 565 RCEDDR-----FELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF-TALNLRC 618
+C+ DR F +L+E + ++V+ L+ N K G + +++ T LN+
Sbjct: 1051 KCDRDRTKIVLFSYRILMEWLCQEGQQVQIDLD--NGEIFKFQGDLNEDENLMTLLNMDG 1108
Query: 619 IERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQ 653
R+ GD + V L N S ++ L QK+
Sbjct: 1109 -RRICGDRVVPVSTSLESNES-SIDHFSENLHQKR 1141
Score = 43 (20.2 bits), Expect = 5.1e-09, Sum P(3) = 5.1e-09
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 566 CEDDRFELDMLLESVNVTTKRVEELLEK 593
CED + E++M E + T + ELL+K
Sbjct: 468 CEDSQQEIEMSSE-LAAHTLNIIELLKK 494
Score = 38 (18.4 bits), Expect = 7.7e-13, Sum P(3) = 7.7e-13
Identities = 7/24 (29%), Positives = 14/24 (58%)
Query: 121 EQPPPKKPVEFEEAINFVNKIKTR 144
+Q P +P+ ++A+N N T+
Sbjct: 178 QQSPLIRPIPQQQALNIQNLTSTQ 201
Score = 38 (18.4 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 23/101 (22%), Positives = 46/101 (45%)
Query: 131 FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALF-QDHPDLLEE 189
F E ++ + + F GDD VY I+ + + ++ +A++ Q+H D ++
Sbjct: 1133 FSENLH-QKRTRRTFYGDDSVYM----IIRYHHMIQERFAKILS-TQAIYAQEHFDNQKK 1186
Query: 190 FTHFLPDSSGAASIHYVPSGRNSI---LRDRSSAMPTARQV 227
+ D GA +H GR ++ ++ R +A+ R V
Sbjct: 1187 NKRW-EDGIGA-DMH----GRKALQENIKQRRAAVNDIRNV 1221
Score = 38 (18.4 bits), Expect = 3.2e-09, Sum P(3) = 3.2e-09
Identities = 6/15 (40%), Positives = 10/15 (66%)
Query: 671 YSKNYHKSLDHRSFY 685
+S+N H+ R+FY
Sbjct: 1133 FSENLHQKRTRRTFY 1147
Score = 37 (18.1 bits), Expect = 2.0e-08, Sum P(3) = 2.0e-08
Identities = 7/18 (38%), Positives = 13/18 (72%)
Query: 144 RFQGDDHVYKSFLDILNM 161
+FQGD + ++ + +LNM
Sbjct: 1089 KFQGDLNEDENLMTLLNM 1106
>UNIPROTKB|A5JYW9 [details] [associations]
symbol:sin-3 "Protein SIN-3, isoform b" species:6239
"Caenorhabditis elegans" [GO:0016575 "histone deacetylation"
evidence=IDA] InterPro:IPR003822 Pfam:PF02671 PROSITE:PS51477
GO:GO:0005634 GO:GO:0001708 GO:GO:0016246 GO:GO:0006355
GO:GO:0040011 GO:GO:0006974 GO:GO:0045138 GO:GO:0040025
GO:GO:0040027 GO:GO:0016575 Gene3D:1.20.1160.11 SUPFAM:SSF47762
EMBL:Z81494 eggNOG:COG5602 KO:K11644 InterPro:IPR013194
Pfam:PF08295 SMART:SM00761 GeneTree:ENSGT00390000007239
RefSeq:NP_001122442.1 UniGene:Cel.18986 ProteinModelPortal:A5JYW9
SMR:A5JYW9 IntAct:A5JYW9 STRING:A5JYW9 PaxDb:A5JYW9
EnsemblMetazoa:F02E9.4b GeneID:172628 KEGG:cel:CELE_F02E9.4
UCSC:F02E9.4b CTD:172628 WormBase:F02E9.4b InParanoid:A5JYW9
OMA:ILMEWLC NextBio:876327 ArrayExpress:A5JYW9 Uniprot:A5JYW9
Length = 1507
Score = 215 (80.7 bits), Expect = 5.6e-28, Sum P(2) = 5.6e-28
Identities = 61/237 (25%), Positives = 114/237 (48%)
Query: 473 AFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGA 532
A + KD+ +D+ + + ++ ++ + PSYR + K+ S R EL
Sbjct: 766 AVMRKDLPAIQPKRGLRDQKMLQQVKNVEAATVCTLGPSYRFM-KDTKATDCSGRVELDD 824
Query: 533 E---VLNDHWVSVTS-GSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVE 588
+ VLND W S+ S SED + ++K+ EE F+ ED+R+ELD++++S +++
Sbjct: 825 DLKGVLNDTWTSIPSWSSEDTGSQAIKKSNLEEFHFKTEDERYELDIIVDSNRTVIEQLS 884
Query: 589 ELL---EKINNN---TIKTDGPIRVEDHFTALNLRCIERLYGDHGLDVMDVLRKNASLAL 642
+ L E +++ + K D + T + R + +++ + D +D +KN + L
Sbjct: 885 KTLRDYEAMSDEDKKSFKLDKWLNASSRSTTI--RVLAKVFTNSAQDFIDAAQKNPLVGL 942
Query: 643 PVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKAL 699
IL LK+K W+R + D N+ W + K + + K D K+ +K L
Sbjct: 943 RRILESLKEKDLLWSRFQQDTNRTWRDALDKQMSAATTILNNQHKNYDQKAFKSKPL 999
Score = 195 (73.7 bits), Expect = 5.6e-28, Sum P(2) = 5.6e-28
Identities = 39/71 (54%), Positives = 49/71 (69%)
Query: 46 NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFN 105
++ALAYL+ +K F Y FLE+MKDF+AQRI+T VI +V EL +L+LGFN
Sbjct: 287 DEALAYLRVIKSTFSSDVPVYHRFLEIMKDFRAQRIETPDVIEQVAELLYDSPELVLGFN 346
Query: 106 TFLPKGYEITL 116
TFLP GY ITL
Sbjct: 347 TFLPTGYRITL 357
Score = 116 (45.9 bits), Expect = 9.9e-20, Sum P(2) = 9.9e-20
Identities = 24/71 (33%), Positives = 39/71 (54%)
Query: 125 PKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHP 184
P+ P +EA+ ++ IK+ F D VY FL+I+ +R + +V ++V L D P
Sbjct: 280 PEGPPRVDEALAYLRVIKSTFSSDVPVYHRFLEIMKDFRAQRIETPDVIEQVAELLYDSP 339
Query: 185 DLLEEFTHFLP 195
+L+ F FLP
Sbjct: 340 ELVLGFNTFLP 350
Score = 60 (26.2 bits), Expect = 7.7e-13, Sum P(3) = 7.7e-13
Identities = 17/62 (27%), Positives = 29/62 (46%)
Query: 351 QELSFCEKVKDKLRDD---YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNG 407
+ L++ +K D Y FL + + + I ++ V +LL P+L+ GFN
Sbjct: 288 EALAYLRVIKSTFSSDVPVYHRFLEIMKDFRAQRIETPDVIEQVAELLYDSPELVLGFNT 347
Query: 408 FL 409
FL
Sbjct: 348 FL 349
Score = 45 (20.9 bits), Expect = 3.2e-09, Sum P(3) = 3.2e-09
Identities = 24/95 (25%), Positives = 43/95 (45%)
Query: 565 RCEDDR-----FELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF-TALNLRC 618
+C+ DR F +L+E + ++V+ L+ N K G + +++ T LN+
Sbjct: 1051 KCDRDRTKIVLFSYRILMEWLCQEGQQVQIDLD--NGEIFKFQGDLNEDENLMTLLNMDG 1108
Query: 619 IERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQ 653
R+ GD + V L N S ++ L QK+
Sbjct: 1109 -RRICGDRVVPVSTSLESNES-SIDHFSENLHQKR 1141
Score = 43 (20.2 bits), Expect = 5.1e-09, Sum P(3) = 5.1e-09
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 566 CEDDRFELDMLLESVNVTTKRVEELLEK 593
CED + E++M E + T + ELL+K
Sbjct: 468 CEDSQQEIEMSSE-LAAHTLNIIELLKK 494
Score = 38 (18.4 bits), Expect = 7.7e-13, Sum P(3) = 7.7e-13
Identities = 7/24 (29%), Positives = 14/24 (58%)
Query: 121 EQPPPKKPVEFEEAINFVNKIKTR 144
+Q P +P+ ++A+N N T+
Sbjct: 178 QQSPLIRPIPQQQALNIQNLTSTQ 201
Score = 38 (18.4 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 23/101 (22%), Positives = 46/101 (45%)
Query: 131 FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALF-QDHPDLLEE 189
F E ++ + + F GDD VY I+ + + ++ +A++ Q+H D ++
Sbjct: 1133 FSENLH-QKRTRRTFYGDDSVYM----IIRYHHMIQERFAKILS-TQAIYAQEHFDNQKK 1186
Query: 190 FTHFLPDSSGAASIHYVPSGRNSI---LRDRSSAMPTARQV 227
+ D GA +H GR ++ ++ R +A+ R V
Sbjct: 1187 NKRW-EDGIGA-DMH----GRKALQENIKQRRAAVNDIRNV 1221
Score = 38 (18.4 bits), Expect = 3.2e-09, Sum P(3) = 3.2e-09
Identities = 6/15 (40%), Positives = 10/15 (66%)
Query: 671 YSKNYHKSLDHRSFY 685
+S+N H+ R+FY
Sbjct: 1133 FSENLHQKRTRRTFY 1147
Score = 37 (18.1 bits), Expect = 2.0e-08, Sum P(3) = 2.0e-08
Identities = 7/18 (38%), Positives = 13/18 (72%)
Query: 144 RFQGDDHVYKSFLDILNM 161
+FQGD + ++ + +LNM
Sbjct: 1089 KFQGDLNEDENLMTLLNM 1106
>TAIR|locus:2015919 [details] [associations]
symbol:AT1G27280 "AT1G27280" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] InterPro:IPR003822
Pfam:PF02671 PROSITE:PS51477 EMBL:CP002684 GO:GO:0005634
GO:GO:0006355 Gene3D:1.20.1160.11 SUPFAM:SSF47762 IPI:IPI00521050
RefSeq:NP_174047.1 UniGene:At.51788 ProteinModelPortal:F4HR64
SMR:F4HR64 EnsemblPlants:AT1G27280.1 GeneID:839616
KEGG:ath:AT1G27280 Uniprot:F4HR64
Length = 225
Score = 294 (108.6 bits), Expect = 8.1e-25, P = 8.1e-25
Identities = 60/151 (39%), Positives = 92/151 (60%)
Query: 27 GQTQVVXXXXXXXAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGV 86
G Q+ + T +DA++Y+ VK+ F D+ KY +F ++ D + + ID AG
Sbjct: 61 GLAQLQTIAATSVSPDSTIDDAVSYINTVKEAFHDEPAKYYEFFQLFYDIRYRLIDVAGG 120
Query: 87 IARVKELFKGHRDLILGFNTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQ 146
I RV+EL K H++L++ N FLP + L L+ EQ + + +F+ K+K RFQ
Sbjct: 121 ITRVEELLKAHKNLLVRLNAFLPPEAQRILHLKIEQRAASDINKRKRVASFIGKLKERFQ 180
Query: 147 GDD-HVYKSFLDILNMYRKENKSITEVYQEV 176
GDD HVY+SFL+IL MY++ NKS+ ++YQEV
Sbjct: 181 GDDRHVYESFLEILTMYQEGNKSVNDLYQEV 211
Score = 138 (53.6 bits), Expect = 4.7e-08, Sum P(2) = 4.7e-08
Identities = 35/143 (24%), Positives = 67/143 (46%)
Query: 55 VKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLP-KGYE 113
+++++ D+ EK++ L +++D+ R D A + A + EL + H +L++ F F P + E
Sbjct: 1 MEEVYHDEPEKFNHILHLIRDYFNHRDDRARITACMGELMRDHLNLLVRFFDFFPAEASE 60
Query: 114 ITLPLEDEQPPPKKPVE-FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEV 172
L+ P ++A++++N +K F + Y F + R +
Sbjct: 61 GLAQLQTIAATSVSPDSTIDDAVSYINTVKEAFHDEPAKYYEFFQLFYDIRYRLIDVAGG 120
Query: 173 YQEVEALFQDHPDLLEEFTHFLP 195
VE L + H +LL FLP
Sbjct: 121 ITRVEELLKAHKNLLVRLNAFLP 143
Score = 53 (23.7 bits), Expect = 4.7e-08, Sum P(2) = 4.7e-08
Identities = 15/47 (31%), Positives = 26/47 (55%)
Query: 354 SFCEKVKDKLRDD----YQEFLRCLHLYTKEIITRSELQSLVGDLLG 396
SF K+K++ + D Y+ FL L +Y + + ++L VG L+G
Sbjct: 170 SFIGKLKERFQGDDRHVYESFLEILTMYQEGNKSVNDLYQEVGFLVG 216
>TAIR|locus:2032362 [details] [associations]
symbol:AT1G24250 "AT1G24250" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] InterPro:IPR003822
Pfam:PF02671 PROSITE:PS51477 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0006355 EMBL:AC002396
Gene3D:1.20.1160.11 SUPFAM:SSF47762 IPI:IPI00521169 PIR:T00655
RefSeq:NP_173835.1 UniGene:At.51750 ProteinModelPortal:O48692
SMR:O48692 PRIDE:O48692 EnsemblPlants:AT1G24250.1 GeneID:839039
KEGG:ath:AT1G24250 TAIR:At1g24250 eggNOG:KOG4204
HOGENOM:HOG000057296 InParanoid:O48692 PhylomeDB:O48692
ProtClustDB:CLSN2682122 Genevestigator:O48692 Uniprot:O48692
Length = 252
Score = 179 (68.1 bits), Expect = 4.4e-22, Sum P(2) = 4.4e-22
Identities = 37/76 (48%), Positives = 51/76 (67%)
Query: 44 TTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILG 103
T +DA +YL AVK+ F D+ KY + L+++KDFKA+R+D A VIARV+EL K H +L+ G
Sbjct: 117 TIDDATSYLIAVKEAFHDEPAKYGEMLKLLKDFKARRVDAACVIARVEELMKDHLNLLFG 176
Query: 104 FNTFLPKGYEITLPLE 119
F FL T L+
Sbjct: 177 FCVFLSATTSFTTKLK 192
Score = 135 (52.6 bits), Expect = 4.4e-22, Sum P(2) = 4.4e-22
Identities = 30/62 (48%), Positives = 37/62 (59%)
Query: 136 NFVNKIKTRFQGD-DHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFL 194
+F K+K RFQGD V S L I+ MY + NKS + YQEV AL Q H DL+ E + L
Sbjct: 186 SFTTKLKARFQGDGSQVVDSVLQIMRMYGEGNKSKHDAYQEVVALVQGHDDLVMELSQIL 245
Query: 195 PD 196
D
Sbjct: 246 TD 247
Score = 117 (46.2 bits), Expect = 8.0e-14, Sum P(2) = 8.0e-14
Identities = 26/74 (35%), Positives = 40/74 (54%)
Query: 47 DALAYLKAVKDIFQDKRE-KYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFN 105
D AY+ AV+ Q+ ++ F+ + + F A RI AR+++L K H L LG N
Sbjct: 14 DVKAYVNAVEVALQEMEPARFGMFVRLFRGFTAPRIGMPTFSARMQDLLKDHPSLCLGLN 73
Query: 106 TFLPKGYEITLPLE 119
LP Y++T+P E
Sbjct: 74 VLLPPEYQLTIPPE 87
Score = 70 (29.7 bits), Expect = 7.9e-07, Sum P(2) = 7.9e-07
Identities = 18/70 (25%), Positives = 31/70 (44%)
Query: 125 PKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHP 184
P+ ++A +++ +K F + Y L +L ++ V VE L +DH
Sbjct: 112 PRPEPTIDDATSYLIAVKEAFHDEPAKYGEMLKLLKDFKARRVDAACVIARVEELMKDHL 171
Query: 185 DLLEEFTHFL 194
+LL F FL
Sbjct: 172 NLLFGFCVFL 181
>TAIR|locus:2032422 [details] [associations]
symbol:AT1G24210 "AT1G24210" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] InterPro:IPR003822
Pfam:PF02671 PROSITE:PS51477 EMBL:CP002684 GO:GO:0005634
GO:GO:0006355 Gene3D:1.20.1160.11 SUPFAM:SSF47762
ProtClustDB:CLSN2682877 EMBL:AY086413 EMBL:BT024693 IPI:IPI00540858
RefSeq:NP_564212.1 UniGene:At.41463 ProteinModelPortal:Q8LCT6
SMR:Q8LCT6 EnsemblPlants:AT1G24210.1 GeneID:839035
KEGG:ath:AT1G24210 TAIR:At1g24210 InParanoid:Q8LCT6 OMA:VKETFHD
PhylomeDB:Q8LCT6 Genevestigator:Q8LCT6 Uniprot:Q8LCT6
Length = 155
Score = 167 (63.8 bits), Expect = 2.5e-21, Sum P(2) = 2.5e-21
Identities = 32/67 (47%), Positives = 47/67 (70%)
Query: 43 LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
LT +DA +Y+ AVK+ F D+ KY +F++++ R+D VIARV+EL K H+DL+L
Sbjct: 10 LTKDDAHSYIIAVKETFHDEPTKYQEFIKLLNGVCDHRVDKYSVIARVEELMKDHQDLLL 69
Query: 103 GFNTFLP 109
GF+ FLP
Sbjct: 70 GFSVFLP 76
Score = 122 (48.0 bits), Expect = 2.5e-21, Sum P(2) = 2.5e-21
Identities = 28/68 (41%), Positives = 42/68 (61%)
Query: 128 PVEFEEAINFVNKIKTRFQG-DDHVYKSFLDILNMYRKENKSITEVYQEV-EALFQDHPD 185
PV E+ F+NK+KTRFQ D HV + ++ M+++ S+ EV +EV + LF H D
Sbjct: 77 PVSVED---FINKLKTRFQSLDTHVVGAIRGLMKMFKEGKMSVKEVQEEVIDVLFY-HED 132
Query: 186 LLEEFTHF 193
L+E+F F
Sbjct: 133 LIEDFLRF 140
>TAIR|locus:2015994 [details] [associations]
symbol:AT1G27260 "AT1G27260" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] InterPro:IPR003822
Pfam:PF02671 PROSITE:PS51477 EMBL:CP002684 GO:GO:0005634
GO:GO:0006355 Gene3D:1.20.1160.11 SUPFAM:SSF47762 IPI:IPI00548787
RefSeq:NP_174045.1 UniGene:At.51786 ProteinModelPortal:F4HR62
SMR:F4HR62 EnsemblPlants:AT1G27260.1 GeneID:839614
KEGG:ath:AT1G27260 OMA:IEDATSY Uniprot:F4HR62
Length = 222
Score = 229 (85.7 bits), Expect = 2.1e-20, Sum P(2) = 2.1e-20
Identities = 54/155 (34%), Positives = 81/155 (52%)
Query: 46 NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFN 105
N A AY+ AV+D F+D+ KY FL +++D +A+RID A + EL K H DL+LGFN
Sbjct: 2 NKAFAYIIAVRDRFRDEPAKYRQFLSLLRDRRARRIDKATFFVGLVELIKDHLDLLLGFN 61
Query: 106 TFLPKGYEITL-P-----LEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDIL 159
LP ++I + P + PP+ +E +A +++N +K F + Y+ L +L
Sbjct: 62 ALLPARFQIPITPAGFQNVVGRSVPPETTIE--DATSYLNSVKRAFHDEPAKYEELLKLL 119
Query: 160 NMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFL 194
N VE L +DH LL F+ FL
Sbjct: 120 NDIEARRVDAASFIASVEELMKDHQTLLNGFSVFL 154
Score = 154 (59.3 bits), Expect = 1.5e-19, Sum P(2) = 1.5e-19
Identities = 29/65 (44%), Positives = 44/65 (67%)
Query: 44 TTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILG 103
T DA +YL +VK F D+ KY++ L+++ D +A+R+D A IA V+EL K H+ L+ G
Sbjct: 90 TIEDATSYLNSVKRAFHDEPAKYEELLKLLNDIEARRVDAASFIASVEELMKDHQTLLNG 149
Query: 104 FNTFL 108
F+ FL
Sbjct: 150 FSVFL 154
Score = 139 (54.0 bits), Expect = 1.5e-19, Sum P(2) = 1.5e-19
Identities = 29/56 (51%), Positives = 37/56 (66%)
Query: 135 INFVNKIKTRFQGD-DHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEE 189
+ F+ K+K +FQGD HV S L IL MY + NKS +E +QEV L QDH DL+ E
Sbjct: 158 MKFIRKLKAKFQGDGSHVADSVLQILRMYSEGNKSKSEAFQEVVPLVQDHEDLVME 213
Score = 50 (22.7 bits), Expect = 2.1e-20, Sum P(2) = 2.1e-20
Identities = 17/64 (26%), Positives = 29/64 (45%)
Query: 343 NAMKSMFSQELSFCEKVKDKLRDD----YQEFLRCLHLYTKEIITRSELQSLVGDLLGRY 398
N S E+ F K+K K + D L+ L +Y++ ++SE V L+ +
Sbjct: 148 NGFSVFLSAEMKFIRKLKAKFQGDGSHVADSVLQILRMYSEGNKSKSEAFQEVVPLVQDH 207
Query: 399 PDLM 402
DL+
Sbjct: 208 EDLV 211
>TAIR|locus:2015899 [details] [associations]
symbol:AT1G27270 "AT1G27270" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] InterPro:IPR003822
Pfam:PF02671 PROSITE:PS51477 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0006355 EMBL:AC004557
Gene3D:1.20.1160.11 SUPFAM:SSF47762 HOGENOM:HOG000057296
ProtClustDB:CLSN2682122 IPI:IPI00525539 RefSeq:NP_174046.1
UniGene:At.51787 ProteinModelPortal:Q9FZK9 SMR:Q9FZK9
EnsemblPlants:AT1G27270.1 GeneID:839615 KEGG:ath:AT1G27270
TAIR:At1g27270 eggNOG:NOG309267 InParanoid:Q9FZK9 OMA:MDDATSY
PhylomeDB:Q9FZK9 Genevestigator:Q9FZK9 Uniprot:Q9FZK9
Length = 241
Score = 161 (61.7 bits), Expect = 2.3e-18, Sum P(2) = 2.3e-18
Identities = 32/65 (49%), Positives = 46/65 (70%)
Query: 44 TTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILG 103
T +DA +YL AVK+ F D+ KY + +++ D KA+RI+ A VIAR++EL K H +L+LG
Sbjct: 110 TMDDATSYLNAVKEAFHDEPAKYMEITKLLTDLKARRINAASVIARMEELLKDHLNLLLG 169
Query: 104 FNTFL 108
F FL
Sbjct: 170 FCVFL 174
Score = 154 (59.3 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 45/161 (27%), Positives = 70/161 (43%)
Query: 47 DALAYLKAVKDIFQDKR-EKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFN 105
D +AY AVK QD EKY +F+ + D+ A R + A ++EL + H +L G N
Sbjct: 14 DGMAYFDAVKVALQDTEPEKYQEFVRIFIDYTANRFGFETLSASLQELLRDHANLCHGSN 73
Query: 106 TFLPKGYEITLPLE-----------DEQPPPKKPVE-FEEAINFVNKIKTRFQGDDHVYK 153
LP + +P E PP V ++A +++N +K F + Y
Sbjct: 74 VLLPFRLQTAIPPEASAEFHINKVVGRSVPPAVAVPTMDDATSYLNAVKEAFHDEPAKYM 133
Query: 154 SFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFL 194
+L + + V +E L +DH +LL F FL
Sbjct: 134 EITKLLTDLKARRINAASVIARMEELLKDHLNLLLGFCVFL 174
Score = 125 (49.1 bits), Expect = 2.3e-18, Sum P(2) = 2.3e-18
Identities = 29/61 (47%), Positives = 34/61 (55%)
Query: 137 FVNKIKTRFQGD-DHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLP 195
F+ K+K RF GD V S L IL M+ + NKS E QEV AL Q H DLL E +
Sbjct: 180 FITKLKARFLGDGSQVVDSVLQILRMHSEGNKSKDEASQEVRALIQGHEDLLMELSEIFS 239
Query: 196 D 196
D
Sbjct: 240 D 240
>TAIR|locus:2032427 [details] [associations]
symbol:AT1G24220 "AT1G24220" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] InterPro:IPR003822
Pfam:PF02671 PROSITE:PS51477 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0006355 EMBL:AC002396
Gene3D:1.20.1160.11 SUPFAM:SSF47762 IPI:IPI00536064 PIR:T00652
RefSeq:NP_173832.1 UniGene:At.51749 ProteinModelPortal:O48689
SMR:O48689 EnsemblPlants:AT1G24220.1 GeneID:839036
KEGG:ath:AT1G24220 TAIR:At1g24220 eggNOG:NOG127728
HOGENOM:HOG000114710 InParanoid:O48689 OMA:RRTIPSE PhylomeDB:O48689
ProtClustDB:CLSN2914177 Genevestigator:O48689 Uniprot:O48689
Length = 744
Score = 171 (65.3 bits), Expect = 3.7e-17, Sum P(2) = 3.7e-17
Identities = 33/74 (44%), Positives = 50/74 (67%)
Query: 44 TTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILG 103
T +DA +Y+ +VK+ F D+ KY +FL+++ D+KA+R+D VIARV EL K HR+L+LG
Sbjct: 173 TLDDARSYIDSVKEAFHDEPAKYAEFLKLLNDYKARRLDADSVIARVDELTKDHRNLLLG 232
Query: 104 FNTFLPKGYEITLP 117
L + T+P
Sbjct: 233 LRAILLPAAKSTIP 246
Score = 158 (60.7 bits), Expect = 6.7e-08, Sum P(2) = 6.7e-08
Identities = 43/100 (43%), Positives = 54/100 (54%)
Query: 97 HRDLILGFNTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQG-DDHVYKSF 155
H D L F LP T+P E E KP +E +NF+NK+KTRFQ D HV SF
Sbjct: 343 HTDE-LNFMNKLPTKARRTIPSEAE-----KPTHTDE-LNFMNKLKTRFQRIDTHVVGSF 395
Query: 156 LDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLP 195
I+ MY++ KS EV++EV L H DL +FT P
Sbjct: 396 HSIMTMYKEGKKSRKEVHEEVCDLLYYHEDLRADFTRIFP 435
Score = 139 (54.0 bits), Expect = 8.1e-13, Sum P(3) = 8.1e-13
Identities = 29/83 (34%), Positives = 51/83 (61%)
Query: 40 AQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRD 99
+Q+ T DA++Y+++VK+ F D+ K+D+F + + + R++ + AR+ EL G+
Sbjct: 7 SQEPTMADAVSYIESVKEEFHDEPAKFDEFRMRLNEVRDDRVEKDRITARINELISGNPK 66
Query: 100 LILGFNTFLPKGYEITLPLEDEQ 122
L LG F P+ EIT+P + EQ
Sbjct: 67 LHLGSKVFFPEA-EITIPPKVEQ 88
Score = 129 (50.5 bits), Expect = 3.7e-17, Sum P(2) = 3.7e-17
Identities = 32/67 (47%), Positives = 37/67 (55%)
Query: 125 PKKPVEFEEAINFVNKIKTRFQG-DDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDH 183
PK A + NK RFQG HV S L IL MY + NKS E YQEV +L Q+H
Sbjct: 659 PKAKRTIPPAESNKNKKNARFQGYGSHVVNSVLQILKMYSEGNKSKDEAYQEVVSLLQNH 718
Query: 184 PDLLEEF 190
DL+ EF
Sbjct: 719 VDLVMEF 725
Score = 120 (47.3 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 26/72 (36%), Positives = 40/72 (55%)
Query: 44 TTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILG 103
T + + Y+ VK+ F D+ K+ +FL +M D +I+ A AR+ E+ KGH L+L
Sbjct: 499 TIRETVTYIADVKEAFLDEPAKFHEFLRLMNDVCDHKIEEANGSARMAEIIKGHPRLLLV 558
Query: 104 FNTFLPKG--YE 113
+ F PK YE
Sbjct: 559 LSVFFPKSKQYE 570
Score = 103 (41.3 bits), Expect = 8.1e-13, Sum P(3) = 8.1e-13
Identities = 29/124 (23%), Positives = 57/124 (45%)
Query: 128 PVE--FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
P+E ++A ++++ +K F + Y FL +LN Y+ V V+ L +DH +
Sbjct: 169 PLEKTLDDARSYIDSVKEAFHDEPAKYAEFLKLLNDYKARRLDADSVIARVDELTKDHRN 228
Query: 186 LLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQVHV--DKKERAMASHADRD 243
LL L ++ ++I + G+ + + S +P ++ + K R + S AD+
Sbjct: 229 LLLGLRAILLPAA-KSTIPHKAKGKRTARPEASRTIPVKLKITIIPPKARRTIPSEADKP 287
Query: 244 LSVD 247
D
Sbjct: 288 THTD 291
Score = 63 (27.2 bits), Expect = 8.1e-13, Sum P(3) = 8.1e-13
Identities = 32/114 (28%), Positives = 48/114 (42%)
Query: 299 MQRFPHKRKSARKIEDSTAEPLHQGGEGDE-NF-GMHPVSSSYD-DKNAMKSMFSQELSF 355
M + P KR+ R I +P H DE NF P + A K + EL+F
Sbjct: 323 MNKLPTKRR--RTIPSEAEKPTHT----DELNFMNKLPTKARRTIPSEAEKPTHTDELNF 376
Query: 356 CEKVKDKLR--DDYQ--EFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGF 405
K+K + + D + F + +Y + +R E+ V DLL + DL F
Sbjct: 377 MNKLKTRFQRIDTHVVGSFHSIMTMYKEGKKSRKEVHEEVCDLLYYHEDLRADF 430
Score = 57 (25.1 bits), Expect = 4.7e-09, Sum P(3) = 4.7e-09
Identities = 23/112 (20%), Positives = 43/112 (38%)
Query: 133 EAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTH 192
E + ++ +K F + + FL ++N + + + HP LL +
Sbjct: 502 ETVTYIADVKEAFLDEPAKFHEFLRLMNDVCDHKIEEANGSARMAEIIKGHPRLLLVLSV 561
Query: 193 FLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQVHVDKKERAMASHADRDL 244
F P S Y + R SI + S +P + K R ++ A+R +
Sbjct: 562 FFPKSK-----QYEEAAR-SISSEASRTIPPKATIP-PKSSRTISPKANRTI 606
Score = 57 (25.1 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 17/65 (26%), Positives = 30/65 (46%)
Query: 354 SFCEKVKDKLRDD---YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLA 410
S+ + VK+ D+ Y EFL+ L+ Y + + + V +L + +L+ G L
Sbjct: 179 SYIDSVKEAFHDEPAKYAEFLKLLNDYKARRLDADSVIARVDELTKDHRNLLLGLRAILL 238
Query: 411 RCEKS 415
KS
Sbjct: 239 PAAKS 243
Score = 57 (25.1 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 20/72 (27%), Positives = 28/72 (38%)
Query: 40 AQKLTTNDALAYLKAVKDIFQD-KREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHR 98
A+K T D L ++ +K FQ F +M +K + V V +L H
Sbjct: 365 AEKPTHTDELNFMNKLKTRFQRIDTHVVGSFHSIMTMYKEGKKSRKEVHEEVCDLLYYHE 424
Query: 99 DLILGFNTFLPK 110
DL F PK
Sbjct: 425 DLRADFTRIFPK 436
Score = 53 (23.7 bits), Expect = 8.4e-12, Sum P(3) = 8.4e-12
Identities = 17/91 (18%), Positives = 42/91 (46%)
Query: 340 DDKNAMKSMFSQELSFCEKVKDKLRDD---YQEFLRCLHLYTKEIITRSELQSLVGDLLG 396
D + + S + +++ VK+ D+ + EFLR ++ I + + + +++
Sbjct: 491 DYRLEIASTIRETVTYIADVKEAFLDEPAKFHEFLRLMNDVCDHKIEEANGSARMAEIIK 550
Query: 397 RYPDLMDGFNGFLARCEKSEELLADVMSKKS 427
+P L+ + F + ++ EE + S+ S
Sbjct: 551 GHPRLLLVLSVFFPKSKQYEEAARSISSEAS 581
Score = 38 (18.4 bits), Expect = 2.8e-10, Sum P(3) = 2.8e-10
Identities = 12/51 (23%), Positives = 22/51 (43%)
Query: 371 LRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLARCEKSEELLAD 421
L+ L +Y++ ++ E V LL + DL+ F + + L D
Sbjct: 691 LQILKMYSEGNKSKDEAYQEVVSLLQNHVDLVMEFGDYFSGISAYNRFLRD 741
>TAIR|locus:2118116 [details] [associations]
symbol:WRKY19 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0004672 "protein kinase activity"
evidence=IEA] [GO:0004713 "protein tyrosine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006468 "protein
phosphorylation" evidence=IEA] [GO:0006952 "defense response"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0043531 "ADP
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006944 "cellular
membrane fusion" evidence=RCA] [GO:0009556 "microsporogenesis"
evidence=RCA] [GO:0052543 "callose deposition in cell wall"
evidence=RCA] Pfam:PF00560 InterPro:IPR000157 InterPro:IPR001611
InterPro:IPR000719 InterPro:IPR000742 InterPro:IPR000767
InterPro:IPR002182 InterPro:IPR002290 InterPro:IPR003593
InterPro:IPR003657 InterPro:IPR003822 InterPro:IPR011009
Pfam:PF00069 Pfam:PF00931 Pfam:PF02671 Pfam:PF03106 PRINTS:PR00364
PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011 PROSITE:PS50811
PROSITE:PS51477 SMART:SM00181 SMART:SM00220 SMART:SM00382
SMART:SM00774 GO:GO:0005524 GO:GO:0005634 GO:GO:0007165
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006952
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674 GO:GO:0043565
GO:GO:0009941 GO:GO:0003700 GO:GO:0043531 GO:GO:0006351
GO:GO:0017111 EMBL:AL049638 EMBL:AL161533 InterPro:IPR011713
Pfam:PF07725 Gene3D:1.20.1160.11 SUPFAM:SSF47762 SUPFAM:SSF52200
Gene3D:2.20.25.80 SUPFAM:SSF118290 IPI:IPI00519247 PIR:T06609
RefSeq:NP_001118968.1 UniGene:At.3076 ProteinModelPortal:Q9SZ67
SMR:Q9SZ67 IntAct:Q9SZ67 PaxDb:Q9SZ67 PRIDE:Q9SZ67
EnsemblPlants:AT4G12020.2 GeneID:826810 KEGG:ath:AT4G12020
GeneFarm:1664 TAIR:At4g12020 InParanoid:Q9SZ67
ProtClustDB:CLSN2690875 ArrayExpress:Q9SZ67 Genevestigator:Q9SZ67
Uniprot:Q9SZ67
Length = 1895
Score = 265 (98.3 bits), Expect = 1.1e-16, Sum P(3) = 1.1e-16
Identities = 53/81 (65%), Positives = 65/81 (80%)
Query: 43 LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
+TT DAL YLKAVKD F+D EKYD FLEV+ D K Q +DT+GVIAR+K+LFKGH DL+L
Sbjct: 304 VTTGDALNYLKAVKDKFEDS-EKYDTFLEVLNDCKHQGVDTSGVIARLKDLFKGHDDLLL 362
Query: 103 GFNTFLPKGYEITLPLEDEQP 123
GFNT+L K Y+IT+ ED+ P
Sbjct: 363 GFNTYLSKEYQITILPEDDFP 383
Score = 46 (21.3 bits), Expect = 1.1e-16, Sum P(3) = 1.1e-16
Identities = 16/69 (23%), Positives = 30/69 (43%)
Query: 303 PHKRKSARKIEDSTAEPLHQGGEGDE--NFGMHPVSSSYDDKNAMKSMFSQELSFCEKVK 360
P KRK R ++ AE +++ E N G ++ + + S EL+ +
Sbjct: 499 PSKRKVERSLDGQVAEIVYKDRHNHEPPNQGKDGSTTYLSGSSTHINCMSSELTASQFSS 558
Query: 361 DKLRDDYQE 369
+K + + QE
Sbjct: 559 NKTKIEQQE 567
Score = 41 (19.5 bits), Expect = 1.1e-16, Sum P(3) = 1.1e-16
Identities = 14/71 (19%), Positives = 29/71 (40%)
Query: 826 SNPSRNGDESIPPEQSSSSRAWLPNGDHGIKEDVSVEADHNARKSDNFCDSSEQDKVQNN 885
+NP+ N E +P E S P D+ + +VE ++ S + + ++
Sbjct: 1461 TNPNANSTELMPSESSKLEILGTP-ADNEVVVGGTVEKTRGIERTPTILVKSREYLIPDD 1519
Query: 886 A-AMADETSGI 895
A+ + G+
Sbjct: 1520 VVAVGGDIKGL 1530
>TAIR|locus:2205754 [details] [associations]
symbol:AT1G27220 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] InterPro:IPR003822
InterPro:IPR012337 Pfam:PF02671 PROSITE:PS51477 EMBL:CP002684
GO:GO:0005634 GO:GO:0006355 GO:GO:0003676 SUPFAM:SSF53098
Gene3D:1.20.1160.11 SUPFAM:SSF47762 IPI:IPI00534786
RefSeq:NP_174042.1 UniGene:At.51783 ProteinModelPortal:F4HR59
SMR:F4HR59 EnsemblPlants:AT1G27220.1 GeneID:839611
KEGG:ath:AT1G27220 ArrayExpress:F4HR59 Uniprot:F4HR59
Length = 184
Score = 217 (81.4 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 42/73 (57%), Positives = 52/73 (71%)
Query: 42 KLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLI 101
K T +DA AY++ VK F + +KYDDF+ +MK+FKA++ID I VKEL KGHRDLI
Sbjct: 9 KATVDDAYAYIRTVKSTFHNDPDKYDDFMAIMKNFKARKIDRNTCIEEVKELLKGHRDLI 68
Query: 102 LGFNTFLPKGYEI 114
GFN FLPK EI
Sbjct: 69 SGFNAFLPKCLEI 81
>TAIR|locus:2016024 [details] [associations]
symbol:AT1G27250 "AT1G27250" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] InterPro:IPR003822
Pfam:PF02671 PROSITE:PS51477 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0006355 EMBL:AC000348
Gene3D:1.20.1160.11 SUPFAM:SSF47762 IPI:IPI00544484
RefSeq:NP_174044.1 UniGene:At.51785 ProteinModelPortal:O04572
SMR:O04572 PaxDb:O04572 PRIDE:O04572 EnsemblPlants:AT1G27250.1
GeneID:839613 KEGG:ath:AT1G27250 TAIR:At1g27250 eggNOG:NOG320258
HOGENOM:HOG000113937 InParanoid:O04572 OMA:GCIKEVE PhylomeDB:O04572
ProtClustDB:CLSN2682873 Genevestigator:O04572 Uniprot:O04572
Length = 137
Score = 210 (79.0 bits), Expect = 7.8e-16, P = 7.8e-16
Identities = 42/73 (57%), Positives = 53/73 (72%)
Query: 42 KLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLI 101
+ T +DA AYL+AV+ F + +KYDDF+ VM +FKA+RID G I V++L KGHRDLI
Sbjct: 16 RATKDDAYAYLRAVRAKFHNDSKKYDDFVAVMTNFKARRIDRDGCIKEVEQLLKGHRDLI 75
Query: 102 LGFNTFLPKGYEI 114
GFN FLPK EI
Sbjct: 76 SGFNAFLPKCLEI 88
>TAIR|locus:2147870 [details] [associations]
symbol:AT5G15040 "AT5G15040" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] InterPro:IPR003822
Pfam:PF02671 PROSITE:PS51477 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006355 EMBL:AL391146
Gene3D:1.20.1160.11 SUPFAM:SSF47762 IPI:IPI00528888 PIR:T51449
RefSeq:NP_197008.1 UniGene:At.54851 ProteinModelPortal:Q9LFQ1
SMR:Q9LFQ1 EnsemblPlants:AT5G15040.1 GeneID:831356
KEGG:ath:AT5G15040 TAIR:At5g15040 eggNOG:NOG238905
HOGENOM:HOG000153015 InParanoid:Q9LFQ1 OMA:MAECRAY PhylomeDB:Q9LFQ1
ProtClustDB:CLSN2916836 Genevestigator:Q9LFQ1 Uniprot:Q9LFQ1
Length = 87
Score = 189 (71.6 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 37/67 (55%), Positives = 46/67 (68%)
Query: 50 AYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLP 109
AY VKD F D+ EKYD F ++ D KA+RI A++KELFK H +LI+GFNTFLP
Sbjct: 6 AYFMEVKDTFHDQIEKYDMFKNILLDLKARRIGRHTAFAQLKELFKEHNELIIGFNTFLP 65
Query: 110 KGYEITL 116
GY+I L
Sbjct: 66 TGYKIAL 72
>TAIR|locus:2034860 [details] [associations]
symbol:AT1G23810 "AT1G23810" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] InterPro:IPR003822
Pfam:PF02671 PROSITE:PS51477 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0006355 EMBL:AC005990
Gene3D:1.20.1160.11 SUPFAM:SSF47762 eggNOG:KOG4204
HOGENOM:HOG000057296 ProtClustDB:CLSN2682122 IPI:IPI00530955
PIR:D86372 RefSeq:NP_173793.1 UniGene:At.51744
ProteinModelPortal:Q9ZUB5 SMR:Q9ZUB5 PRIDE:Q9ZUB5
EnsemblPlants:AT1G23810.1 GeneID:838992 KEGG:ath:AT1G23810
TAIR:At1g23810 InParanoid:Q9ZUB5 PhylomeDB:Q9ZUB5
Genevestigator:Q9ZUB5 Uniprot:Q9ZUB5
Length = 241
Score = 178 (67.7 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 42/132 (31%), Positives = 76/132 (57%)
Query: 44 TTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILG 103
T +DA +YL AVK+ F D+ KY++ L+++ DFKA+R++ A VIARV+EL K H +L+ G
Sbjct: 106 TIDDATSYLIAVKEAFHDEPAKYEEMLKLLNDFKARRVNAASVIARVEELMKDHSNLLFG 165
Query: 104 FNTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRF-QGDDHVYKSFLDILNMY 162
F FL T L+ K + + ++ V +I + +G+ + ++ +I+ +
Sbjct: 166 FCVFLSATTSFTTKLK-----AKFQGDGSQVVDSVLQIMRMYGEGNKSKHDAYQEIVALV 220
Query: 163 RKENKSITEVYQ 174
+ + + E+ Q
Sbjct: 221 QGHDDLVMELSQ 232
Score = 172 (65.6 bits), Expect = 6.3e-11, P = 6.3e-11
Identities = 46/157 (29%), Positives = 76/157 (48%)
Query: 47 DALAYLKAVKDIFQDKRE-KYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFN 105
D AY+ AVK ++ KY +FL + + A+R+ A AR+++L K H L LG N
Sbjct: 14 DGKAYVNAVKVALEEAEPAKYQEFLRLFHEVIARRMGMATFSARMQDLLKDHPSLCLGLN 73
Query: 106 TFLPKGYEITLPLE--DE------QPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLD 157
L Y+ +P E +E + P+ ++A +++ +K F + Y+ L
Sbjct: 74 VMLAPEYQRAIPPEASEEFHKVVGRSVPRPEPTIDDATSYLIAVKEAFHDEPAKYEEMLK 133
Query: 158 ILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFL 194
+LN ++ + V VE L +DH +LL F FL
Sbjct: 134 LLNDFKARRVNAASVIARVEELMKDHSNLLFGFCVFL 170
Score = 130 (50.8 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 28/64 (43%), Positives = 37/64 (57%)
Query: 136 NFVNKIKTRFQGD-DHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFL 194
+F K+K +FQGD V S L I+ MY + NKS + YQE+ AL Q H DL+ E +
Sbjct: 175 SFTTKLKAKFQGDGSQVVDSVLQIMRMYGEGNKSKHDAYQEIVALVQGHDDLVMELSQIF 234
Query: 195 PDSS 198
D S
Sbjct: 235 TDPS 238
>UNIPROTKB|H3BP90 [details] [associations]
symbol:SIN3A "Paired amphipathic helix protein Sin3a"
species:9606 "Homo sapiens" [GO:0000776 "kinetochore" evidence=IEA]
[GO:0000785 "chromatin" evidence=IEA] [GO:0001103 "RNA polymerase
II repressing transcription factor binding" evidence=IEA]
[GO:0001106 "RNA polymerase II transcription corepressor activity"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] [GO:0007568 "aging"
evidence=IEA] [GO:0010243 "response to organic nitrogen"
evidence=IEA] [GO:0017053 "transcriptional repressor complex"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0034613 "cellular protein localization" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0043619 "regulation of transcription from RNA
polymerase II promoter in response to oxidative stress"
evidence=IEA] [GO:0051329 "interphase of mitotic cell cycle"
evidence=IEA] [GO:0051595 "response to methylglyoxal" evidence=IEA]
[GO:0071333 "cellular response to glucose stimulus" evidence=IEA]
InterPro:IPR003822 Pfam:PF02671 PROSITE:PS51477 GO:GO:0017053
GO:GO:0043066 GO:GO:0000776 GO:GO:0034613 GO:GO:0071333
GO:GO:0003677 GO:GO:0006260 GO:GO:0007568 GO:GO:0001701
GO:GO:0000785 GO:GO:0003700 GO:GO:0003682 GO:GO:0005667
GO:GO:0010243 GO:GO:0051595 GO:GO:0001106 GO:GO:0043619
EMBL:AC068338 Gene3D:1.20.1160.11 SUPFAM:SSF47762 GO:GO:0051329
HGNC:HGNC:19353 ChiTaRS:SIN3A EMBL:AC105137 Ensembl:ENST00000564778
Bgee:H3BP90 Uniprot:H3BP90
Length = 176
Score = 165 (63.1 bits), Expect = 5.0e-11, P = 5.0e-11
Identities = 32/57 (56%), Positives = 43/57 (75%)
Query: 41 QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGH 97
Q+L DAL+YL VK F + + Y+DFL++MK+FK+Q IDT GVI+RV +LFKGH
Sbjct: 119 QRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGH 175
>TAIR|locus:2015949 [details] [associations]
symbol:AT1G27240 "AT1G27240" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] InterPro:IPR003822
Pfam:PF02671 PROSITE:PS51477 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0006355 EMBL:AC004557
EMBL:AC000348 Gene3D:1.20.1160.11 SUPFAM:SSF47762 HSSP:Q62141
IPI:IPI00544967 RefSeq:NP_174043.1 UniGene:At.51784
ProteinModelPortal:O04571 SMR:O04571 EnsemblPlants:AT1G27240.1
GeneID:839612 KEGG:ath:AT1G27240 TAIR:At1g27240 eggNOG:NOG292628
HOGENOM:HOG000113936 InParanoid:O04571 OMA:THVVESF PhylomeDB:O04571
ProtClustDB:CLSN2682877 Genevestigator:O04571 Uniprot:O04571
Length = 186
Score = 156 (60.0 bits), Expect = 4.6e-10, P = 4.6e-10
Identities = 41/147 (27%), Positives = 82/147 (55%)
Query: 44 TTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILG 103
T +DA +Y+ AVK+ F D+ KY++F+++M D + +D A IA++ EL KGH L+ G
Sbjct: 11 TLSDAHSYITAVKEAFHDEPTKYEEFIKLMNDIRDHGVDKASGIAKLTELIKGHPRLLRG 70
Query: 104 FNTFLPK-GYEI------TLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFL 156
+ F P+ +I T+ L+D+ P + + A + KIK + + D +++F+
Sbjct: 71 LSFFFPQVNRDIHHEAKRTIILKDKATIPPEAA-YRGAKSTYTKIK-QIEPD---WENFM 125
Query: 157 DILNM-YRKENKSITEVYQEVEALFQD 182
++L +R + + E + ++ ++ +
Sbjct: 126 NMLKTRFRSLDTHVVESFLKIMIMYDE 152
Score = 123 (48.4 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 27/56 (48%), Positives = 37/56 (66%)
Query: 136 NFVNKIKTRFQG-DDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEF 190
NF+N +KTRF+ D HV +SFL I+ MY + KS EV +EV L H DL+++F
Sbjct: 123 NFMNMLKTRFRSLDTHVVESFLKIMIMYDEGKKSEKEVQEEVVDLLYYHEDLIDKF 178
>TAIR|locus:2090744 [details] [associations]
symbol:AT3G28870 "AT3G28870" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002686 InterPro:IPR004179 SMART:SM00973
InterPro:IPR013194 Pfam:PF08295 IPI:IPI00541068 RefSeq:NP_189529.1
UniGene:At.53548 ProteinModelPortal:F4J0F5 SMR:F4J0F5
EnsemblPlants:AT3G28870.1 GeneID:822521 KEGG:ath:AT3G28870
ArrayExpress:F4J0F5 Uniprot:F4J0F5
Length = 355
Score = 146 (56.5 bits), Expect = 8.5e-07, P = 8.5e-07
Identities = 43/142 (30%), Positives = 67/142 (47%)
Query: 553 HMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFT 612
H EE +++ ED+ FE+DML+ V T VE E I G + ++D
Sbjct: 142 HKNLTDIEEDMYKWEDEMFEVDMLMR---VLTSAVESAKEVIK-------GEMELKD-LG 190
Query: 613 ALNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYS 672
A RC+E LYG+ D+ + + ++ ALP+IL+RLKQK R +W +
Sbjct: 191 AKFYRCVEMLYGE---DMFETVTEDHQRALPMILSRLKQKLRHVTTARERLKPLWKQTIE 247
Query: 673 KNYHKSLDHRSFYFKQQDSKSL 694
K S + R +D+ +L
Sbjct: 248 K---LSTNQRGSTISSEDNNNL 266
>TAIR|locus:2087203 [details] [associations]
symbol:AT3G24260 "AT3G24260" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AP000382
InterPro:IPR013194 Pfam:PF08295 SMART:SM00761 IPI:IPI00533121
RefSeq:NP_189069.1 UniGene:At.65146 PRIDE:Q9LK19
EnsemblPlants:AT3G24260.1 GeneID:822014 KEGG:ath:AT3G24260
TAIR:At3g24260 eggNOG:NOG324637 HOGENOM:HOG000153034
InParanoid:Q9LK19 OMA:TELLMAT PhylomeDB:Q9LK19
ProtClustDB:CLSN2914811 Genevestigator:Q9LK19 Uniprot:Q9LK19
Length = 374
Score = 113 (44.8 bits), Expect = 0.00058, Sum P(2) = 0.00058
Identities = 35/114 (30%), Positives = 51/114 (44%)
Query: 560 EESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFTALNLRCI 619
E+ ++ ED FELDML+ + K EE++ +K G F RC
Sbjct: 255 EKDMYNWEDQMFELDMLVGFLTSAAKNAEEVIN--GERDLKDLG-----GKF----YRCA 303
Query: 620 ERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSK 673
E LYG D+++++++N LP IL RL QK E R V + K
Sbjct: 304 ENLYGR---DMLEIVKENHQRVLPAILNRLNQKLREVTLVRERLKPVLKQTIEK 354
Score = 53 (23.7 bits), Expect = 0.00058, Sum P(2) = 0.00058
Identities = 23/103 (22%), Positives = 42/103 (40%)
Query: 2 KRSRDEVYMNSQIKRPMISSRGEPSGQTQVVXXXXXXXAQKLTTNDALAYLKAVKDIFQD 61
K + + +N P I +P + QKLT LKA+++
Sbjct: 57 KPEENPILLNEPKMIPRIRIVYKPKDDVERKMKDRLEAKQKLTE-----LLKAIEERLT- 110
Query: 62 KREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGF 104
R + + + KDFK+ RID + + ++ L +++L F
Sbjct: 111 -RSELRVYTCLCKDFKSHRIDYSQFVKSLQRLIDKYKNLYQRF 152
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.131 0.377 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1031 919 0.00090 122 3 11 23 0.44 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 49
No. of states in DFA: 629 (67 KB)
Total size of DFA: 446 KB (2212 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 86.08u 0.17s 86.25t Elapsed: 00:00:04
Total cpu time: 86.10u 0.17s 86.27t Elapsed: 00:00:04
Start: Tue May 21 17:02:49 2013 End: Tue May 21 17:02:53 2013