BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 001681
         (1031 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|296086479|emb|CBI32068.3| unnamed protein product [Vitis vinifera]
          Length = 1445

 Score = 1551 bits (4016), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 799/1033 (77%), Positives = 895/1033 (86%), Gaps = 20/1033 (1%)

Query: 1    MKRSRDEVYMNSQIKRPMISSRG-EPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIF 59
            MKRSRD+VYM SQ+KRP +SSRG E SGQ Q++GGG     QKLTTNDALAYLKAVKDIF
Sbjct: 1    MKRSRDDVYMGSQLKRPAVSSRGGEGSGQPQMMGGG----TQKLTTNDALAYLKAVKDIF 56

Query: 60   QDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLE 119
            QDKR+KYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLE
Sbjct: 57   QDKRDKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLE 116

Query: 120  DEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEAL 179
            DEQPP KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEV AL
Sbjct: 117  DEQPPVKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVAAL 176

Query: 180  FQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQVHVDKKERAMASH 239
            F DHPDLL EFTHFLPD+S AAS  Y PSGRN + R+R S +P  RQ+  DKKER  ASH
Sbjct: 177  FHDHPDLLVEFTHFLPDTS-AASTQYAPSGRNPMHRERGSLVPPLRQILTDKKERITASH 235

Query: 240  ADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERRDDHRRERERDDRDFENDVNRDFS- 298
            ADRDLSVDRPD DHDR+++++D   +RRG ++ + R D R  RERDDRDF++D NRDF+ 
Sbjct: 236  ADRDLSVDRPDTDHDRIIMRAD--NQRRGGEKEKERRDDRDRRERDDRDFDHDGNRDFNG 293

Query: 299  MQRFPHKRKSARKIEDSTAEPLHQGGEGDENFGMHPVSSSYDDKNAMKSMFSQELSFCEK 358
            M R PHKRK  R++EDS A+ ++QGGEG EN+GM P+SSSYDDKNA+KSM++QE  FCEK
Sbjct: 294  MPRVPHKRKVTRRVEDSVADQINQGGEGAENYGMRPMSSSYDDKNALKSMYNQEFVFCEK 353

Query: 359  VKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLARCEKSE 416
            VK+KLR  D YQEFL+CLH+Y+KEIITR+ELQSLVGDL+G+YPDLMD FN FL RCEK +
Sbjct: 354  VKEKLRQSDSYQEFLKCLHIYSKEIITRTELQSLVGDLIGKYPDLMDEFNEFLTRCEKID 413

Query: 417  ELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRLDKSVAFVN 476
              LA VMSK+ L      P+SVK+EDRDRDRDRERDD  KDRDRE RE+DRLDKS  F N
Sbjct: 414  GFLAGVMSKRHL------PRSVKIEDRDRDRDRERDDRDKDRDRENRERDRLDKSGGFGN 467

Query: 477  KD-VGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVL 535
            KD V  KMS++ +K+KY+AKPIQELDLSNCERCTPSYRLLPKNY IPSASQRTELGAEVL
Sbjct: 468  KDAVNQKMSLFQNKEKYMAKPIQELDLSNCERCTPSYRLLPKNYPIPSASQRTELGAEVL 527

Query: 536  NDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKIN 595
            ND+WVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELL+KIN
Sbjct: 528  NDYWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLDKIN 587

Query: 596  NNTIKTDGPIRVEDHFTALNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEE 655
            NNTIKTD PIR+ED+FTALNLRCIERLYGDHGLDVMDVLRKNA+LALPVILTRLKQKQEE
Sbjct: 588  NNTIKTDSPIRIEDYFTALNLRCIERLYGDHGLDVMDVLRKNATLALPVILTRLKQKQEE 647

Query: 656  WARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDD 715
            WARCRSDFNKVWAEIY+KNYHKSLDHRSFYFKQQDSKS   KAL AEIKEISEKKRKEDD
Sbjct: 648  WARCRSDFNKVWAEIYAKNYHKSLDHRSFYFKQQDSKSSSTKALLAEIKEISEKKRKEDD 707

Query: 716  VLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLIKYSCGEMCTTEQLDKVMKIWTTFLEP 775
            VLLAIAAGNRR I+P+LEFEY D DIHEDLYQLIKYSCGE+CTTEQLDKVMKIWTTFLEP
Sbjct: 708  VLLAIAAGNRRPIIPNLEFEYPDSDIHEDLYQLIKYSCGEVCTTEQLDKVMKIWTTFLEP 767

Query: 776  MLGVPSRPQGAEDTEDVVKAKSHTVKSRAASVGDSDGSPDGDAAAMTSKHSNPSRNGDES 835
            MLGVPSRPQGAED+EDVVK KSH  K+ AAS+G+SDGSP G A+A  +K  N SRNGDE+
Sbjct: 768  MLGVPSRPQGAEDSEDVVKTKSHAAKNGAASIGESDGSPGGGASATNTKQINSSRNGDET 827

Query: 836  IPPEQSSSSRAWLPNGDHGIKEDVSVEADHNARKSDNFCDSSEQDKVQNNAAMADETSGI 895
            IPPEQSSS R W+ NGD+G+KED S++AD   RK+D FC S++Q K+Q +AAMADE SG+
Sbjct: 828  IPPEQSSSCRVWMVNGDNGVKEDGSLDADRMPRKADTFCASTQQGKMQTSAAMADEMSGV 887

Query: 896  SKQASTNERLIGTNAAIAAAADQSNGRSNIENTSGLSVAHSRPGNHIVEGGLELRSSNEI 955
            SKQA+ NER+  +NA++A+ A+QS+GR+N+ENTSGL+   SR  N  +E GLELR SNE+
Sbjct: 888  SKQATCNERVTNSNASLASGAEQSHGRTNMENTSGLNATPSRASNTALESGLELRPSNEV 947

Query: 956  LPSSEGGECSRQNISTNGVMTEGAKILRYNAESVKQFKIEREEGELSPNGDFEEDNFAVY 1015
            LPSSE G+C R  ISTNGVMTEG K  RY+ ES    KIEREEGELSPNGDFEEDNFAVY
Sbjct: 948  LPSSEVGDCIRPTISTNGVMTEGVKAHRYHEESAGNSKIEREEGELSPNGDFEEDNFAVY 1007

Query: 1016 GESGLEAVHKAKD 1028
            G++G+E   K+KD
Sbjct: 1008 GDAGVEG--KSKD 1018


>gi|255558338|ref|XP_002520196.1| conserved hypothetical protein [Ricinus communis]
 gi|223540688|gb|EEF42251.1| conserved hypothetical protein [Ricinus communis]
          Length = 1452

 Score = 1550 bits (4012), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 808/1053 (76%), Positives = 899/1053 (85%), Gaps = 40/1053 (3%)

Query: 1    MKRSRDEVYMNS----QIKRPMISSRGEPSGQTQVVGGGGGGGA---------------- 40
            MKRSRD+VY+ S    Q+KRPM+SSRGE SGQ Q++GGGGGGG                 
Sbjct: 1    MKRSRDDVYVTSSSQSQLKRPMVSSRGETSGQPQMMGGGGGGGGGSGGGGGGGGGGASGG 60

Query: 41   -QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRD 99
             QKLTTNDALAYLKAVKDIFQDKR+KYDDFLEVMKDFKAQRIDTAGVIARVK+LFKGHRD
Sbjct: 61   GQKLTTNDALAYLKAVKDIFQDKRDKYDDFLEVMKDFKAQRIDTAGVIARVKDLFKGHRD 120

Query: 100  LILGFNTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDIL 159
            LILGFNTFLPKGYEITLPLEDEQPP KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDIL
Sbjct: 121  LILGFNTFLPKGYEITLPLEDEQPPQKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDIL 180

Query: 160  NMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSS 219
            NMYRKENKSITEVYQEV  LFQDH DLL EFTHFLPDSS  AS HY PS RNSI RDRSS
Sbjct: 181  NMYRKENKSITEVYQEVATLFQDHNDLLMEFTHFLPDSSATASAHYAPSVRNSIHRDRSS 240

Query: 220  AMPTARQVHVDKKERAMASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERRDDHR 279
            AMPT RQ+H+DKKER  ASHAD D SVDRPDPDHDR L++SDK+QRRRGEKE+ERR+D  
Sbjct: 241  AMPTMRQMHIDKKERMTASHADCDFSVDRPDPDHDRSLIRSDKEQRRRGEKEKERREDRV 300

Query: 280  RERERDDRDFE-NDVNRDFSMQRFPHKRKSARKIEDSTAEPLHQGGEGDENFGMHPVSSS 338
            R     +     +D +R+F+MQRFPHKRKS R++EDS A+  HQGG+GDENFGMHPVSS+
Sbjct: 301  RREREREDRDYEHDGSREFNMQRFPHKRKSTRRVEDSAAD--HQGGDGDENFGMHPVSST 358

Query: 339  YDDKNAMKSMFSQELSFCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLG 396
            +DDKNA+K+  SQELSFCEKVK+KLR  DDYQ FLRCLHLYTKEIITR+ELQSLV DLLG
Sbjct: 359  FDDKNAVKNALSQELSFCEKVKEKLRNADDYQGFLRCLHLYTKEIITRAELQSLVNDLLG 418

Query: 397  RYPDLMDGFNGFLARCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVK 456
            +Y DLMDGF+ FLARCEK+E LLA V+SKKSLWNEG +P+ VK+ED+DRDRDR R+DG+K
Sbjct: 419  KYQDLMDGFDEFLARCEKNEGLLAGVVSKKSLWNEGNLPRPVKLEDKDRDRDRGREDGIK 478

Query: 457  DRDREAREKDRLDKSVAFVNKDVGP-KMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLL 515
            DR+RE RE+DRLDK+VAF  KD G  KMS++SSKDK+LAKPI ELDLSNCERCTPSYRLL
Sbjct: 479  DRERETRERDRLDKNVAFGPKDTGGHKMSLFSSKDKFLAKPINELDLSNCERCTPSYRLL 538

Query: 516  PKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDM 575
            PKNY IPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDM
Sbjct: 539  PKNYPIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDM 598

Query: 576  LLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFTALNLRCIERLYGDHGLDVMDVLR 635
            LLESV VTTKRVEELLEKINNNTIK DG IR+++H TALN+RCIERLYGDHGLDVMDVLR
Sbjct: 599  LLESVKVTTKRVEELLEKINNNTIKADGLIRIDEHLTALNVRCIERLYGDHGLDVMDVLR 658

Query: 636  KNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLG 695
            KN SLALPVILTRLKQKQEEW +CR+DFNKVWAEIY+KNYHKSLDHRSFYFKQQD+KSL 
Sbjct: 659  KNTSLALPVILTRLKQKQEEWQKCRADFNKVWAEIYAKNYHKSLDHRSFYFKQQDTKSLS 718

Query: 696  AKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLIKYSCGE 755
             KAL AEIKE+SEKKRKEDD+LLA AAGNRR I+P+LEFEY DPDIHEDLYQLIKYSCGE
Sbjct: 719  TKALLAEIKELSEKKRKEDDMLLAFAAGNRRPIIPNLEFEYPDPDIHEDLYQLIKYSCGE 778

Query: 756  MCTTEQLDKVMKIWTTFLEPMLGVPSRPQGAEDTEDVVKAKSHTVKSRAASVGDSDGSPD 815
            +CTTEQLDKVMK+WTTFLEPMLGVPSRPQGAEDTEDVVKAK+H+ KS     GDS+GSP 
Sbjct: 779  VCTTEQLDKVMKVWTTFLEPMLGVPSRPQGAEDTEDVVKAKNHSSKS-----GDSEGSPS 833

Query: 816  GDAAAMTSKHSNPSRNGDESIPPEQSSSSRAWLPNGDHGIKEDVSVEADHNARKSDNFCD 875
            G  A + +KH NPSRNGDES+P EQSSS R WLPNGD+G     S + +  ARKSD  C 
Sbjct: 834  G-GATIINKHPNPSRNGDESMPLEQSSSCRNWLPNGDNG-----SPDVERIARKSDTSCS 887

Query: 876  SSEQDKVQNNAAMADETSGISKQASTNERLIGTNAAIAAAADQSNGRSNIENTSGLSVAH 935
            + + DK+QNN A ADETS + KQA+++ERL+ +N ++A  A+ SNGR+N+E  SGL+   
Sbjct: 888  TIQHDKLQNNPASADETSVVGKQATSSERLVNSNTSLATGAELSNGRTNVE--SGLNNTP 945

Query: 936  SRPGNHIVEGGLELRSSNEILPSSEGGECSRQNISTNGVMTEGAKILRYNAESVKQFKIE 995
            SRP N  + GG  L SSNE LPS+EGG+ SR NISTNG+M EG +  RYN ES  QFKIE
Sbjct: 946  SRPSNGALNGGFGLGSSNENLPSAEGGDFSRPNISTNGLMIEGMRSQRYNDESAAQFKIE 1005

Query: 996  REEGELSPNGDFEEDNFAVYGESGLEAVHKAKD 1028
            REEGELSPNGDFEEDNFA YGE+G EAVHKAK+
Sbjct: 1006 REEGELSPNGDFEEDNFAAYGEAGSEAVHKAKE 1038


>gi|359473314|ref|XP_002267856.2| PREDICTED: paired amphipathic helix protein Sin3-like 4-like [Vitis
            vinifera]
          Length = 1421

 Score = 1503 bits (3891), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 781/1033 (75%), Positives = 874/1033 (84%), Gaps = 44/1033 (4%)

Query: 1    MKRSRDEVYMNSQIKRPMISSRG-EPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIF 59
            MKRSRD+VYM SQ+KRP +SSRG E SGQ Q++GGG     QKLTTNDALAYLKAVKDIF
Sbjct: 1    MKRSRDDVYMGSQLKRPAVSSRGGEGSGQPQMMGGG----TQKLTTNDALAYLKAVKDIF 56

Query: 60   QDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLE 119
            QDKR+KYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLE
Sbjct: 57   QDKRDKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLE 116

Query: 120  DEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEAL 179
            DEQPP KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEV AL
Sbjct: 117  DEQPPVKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVAAL 176

Query: 180  FQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQVHVDKKERAMASH 239
            F DHPDLL EFTHFLPD+S AAS  Y PSGRN + R+R S +P  RQ+  DKKER  ASH
Sbjct: 177  FHDHPDLLVEFTHFLPDTS-AASTQYAPSGRNPMHRERGSLVPPLRQILTDKKERITASH 235

Query: 240  ADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERRDDHRRERERDDRDFENDVNRDFS- 298
            ADRDLSVDRPD DHDR+++++D   +RRG ++ + R D R  RERDDRDF++D NRDF+ 
Sbjct: 236  ADRDLSVDRPDTDHDRIIMRAD--NQRRGGEKEKERRDDRDRRERDDRDFDHDGNRDFNG 293

Query: 299  MQRFPHKRKSARKIEDSTAEPLHQGGEGDENFGMHPVSSSYDDKNAMKSMFSQELSFCEK 358
            M R PHKRK  R++EDS A+ ++QG                        M++QE  FCEK
Sbjct: 294  MPRVPHKRKVTRRVEDSVADQINQG------------------------MYNQEFVFCEK 329

Query: 359  VKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLARCEKSE 416
            VK+KLR  D YQEFL+CLH+Y+KEIITR+ELQSLVGDL+G+YPDLMD FN FL RCEK +
Sbjct: 330  VKEKLRQSDSYQEFLKCLHIYSKEIITRTELQSLVGDLIGKYPDLMDEFNEFLTRCEKID 389

Query: 417  ELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRLDKSVAFVN 476
              LA VMSKKSLWNEG +P+SVK+EDRDRDRDRERDD  KDRDRE RE+DRLDKS  F N
Sbjct: 390  GFLAGVMSKKSLWNEGHLPRSVKIEDRDRDRDRERDDRDKDRDRENRERDRLDKSGGFGN 449

Query: 477  KD-VGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVL 535
            KD V  KMS++ +K+KY+AKPIQELDLSNCERCTPSYRLLPKNY IPSASQRTELGAEVL
Sbjct: 450  KDAVNQKMSLFQNKEKYMAKPIQELDLSNCERCTPSYRLLPKNYPIPSASQRTELGAEVL 509

Query: 536  NDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKIN 595
            ND+WVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELL+KIN
Sbjct: 510  NDYWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLDKIN 569

Query: 596  NNTIKTDGPIRVEDHFTALNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEE 655
            NNTIKTD PIR+ED+FTALNLRCIERLYGDHGLDVMDVLRKNA+LALPVILTRLKQKQEE
Sbjct: 570  NNTIKTDSPIRIEDYFTALNLRCIERLYGDHGLDVMDVLRKNATLALPVILTRLKQKQEE 629

Query: 656  WARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDD 715
            WARCRSDFNKVWAEIY+KNYHKSLDHRSFYFKQQDSKS   KAL AEIKEISEKKRKEDD
Sbjct: 630  WARCRSDFNKVWAEIYAKNYHKSLDHRSFYFKQQDSKSSSTKALLAEIKEISEKKRKEDD 689

Query: 716  VLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLIKYSCGEMCTTEQLDKVMKIWTTFLEP 775
            VLLAIAAGNRR I+P+LEFEY D DIHEDLYQLIKYSCGE+CTTEQLDKVMKIWTTFLEP
Sbjct: 690  VLLAIAAGNRRPIIPNLEFEYPDSDIHEDLYQLIKYSCGEVCTTEQLDKVMKIWTTFLEP 749

Query: 776  MLGVPSRPQGAEDTEDVVKAKSHTVKSRAASVGDSDGSPDGDAAAMTSKHSNPSRNGDES 835
            MLGVPSRPQGAED+EDVVK KSH  K+ AAS+G+SDGSP G A+A  +K  N SRNGDE+
Sbjct: 750  MLGVPSRPQGAEDSEDVVKTKSHAAKNGAASIGESDGSPGGGASATNTKQINSSRNGDET 809

Query: 836  IPPEQSSSSRAWLPNGDHGIKEDVSVEADHNARKSDNFCDSSEQDKVQNNAAMADETSGI 895
            IPPEQSSS R W+ NGD+G+KED S++AD   RK+D FC S++Q K+Q +AAMADE SG+
Sbjct: 810  IPPEQSSSCRVWMVNGDNGVKEDGSLDADRMPRKADTFCASTQQGKMQTSAAMADEMSGV 869

Query: 896  SKQASTNERLIGTNAAIAAAADQSNGRSNIENTSGLSVAHSRPGNHIVEGGLELRSSNEI 955
            SKQA+ NER+  +NA++A+ A+QS+GR+N+ENTSGL+   SR  N  +E GLELR SNE+
Sbjct: 870  SKQATCNERVTNSNASLASGAEQSHGRTNMENTSGLNATPSRASNTALESGLELRPSNEV 929

Query: 956  LPSSEGGECSRQNISTNGVMTEGAKILRYNAESVKQFKIEREEGELSPNGDFEEDNFAVY 1015
                  G+C R  ISTNGVMTEG K  RY+ ES    KIEREEGELSPNGDFEEDNFAVY
Sbjct: 930  ------GDCIRPTISTNGVMTEGVKAHRYHEESAGNSKIEREEGELSPNGDFEEDNFAVY 983

Query: 1016 GESGLEAVHKAKD 1028
            G++G+E   K+KD
Sbjct: 984  GDAGVEG--KSKD 994


>gi|302399131|gb|ADL36860.1| WRKY domain class transcription factor [Malus x domestica]
          Length = 1419

 Score = 1488 bits (3853), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 768/1033 (74%), Positives = 865/1033 (83%), Gaps = 43/1033 (4%)

Query: 1    MKRSRDEVYMNSQIKRPMISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQ 60
            MKRSRD+V+M+SQ+KRPM+S+RGEPSGQ Q++       +QKLTTNDALAYLKAVKDIFQ
Sbjct: 1    MKRSRDDVFMSSQLKRPMVSARGEPSGQPQMMAAAAAA-SQKLTTNDALAYLKAVKDIFQ 59

Query: 61   DK-REKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPL- 118
            DK R KY++FLEVMKDFKA RIDTAGVI RVK+LFKGHR+LILGFNTFLPKGYEITLPL 
Sbjct: 60   DKNRGKYEEFLEVMKDFKATRIDTAGVIERVKDLFKGHRELILGFNTFLPKGYEITLPLD 119

Query: 119  EDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEA 178
            ED+QPP KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI EVYQEV A
Sbjct: 120  EDQQPPQKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSIQEVYQEVAA 179

Query: 179  LFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQVHVDKKERAMAS 238
            LFQDH DLL EFTHFLPD++G ASIH  P  RNS+LRDRSSAMPT RQ+HVDKKER M S
Sbjct: 180  LFQDHADLLVEFTHFLPDTTGTASIH--PPNRNSMLRDRSSAMPTMRQMHVDKKERTMGS 237

Query: 239  HADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERRDDHRRERERDDRDFENDVNRDFS 298
            +AD DLSVDRPDPDHD+ L+K DKDQRRRGEKE+ERR+D  R  + D   F++D +RD S
Sbjct: 238  YADHDLSVDRPDPDHDKALMKVDKDQRRRGEKEKERREDRERREQDDRD-FDHDGSRDLS 296

Query: 299  MQRFPHKRKSARKIEDSTAEPLHQGGEGDENFGMHPVSSSYDDKNAMKSMFSQELSFCEK 358
            MQRF HKRKSA +IED+  E L  G                        M+ QE +FCEK
Sbjct: 297  MQRFSHKRKSAHRIEDT--EQLQPG------------------------MYGQEFAFCEK 330

Query: 359  VKDKLRD--DYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLARCEKSE 416
            VK+KLR+  DYQEFL+CLH+Y+KEIITRSELQSLV DL+GRYP+LMDGF+ FLA CEK +
Sbjct: 331  VKEKLRNPEDYQEFLKCLHIYSKEIITRSELQSLVADLIGRYPELMDGFDDFLACCEKKD 390

Query: 417  ELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRLDKSVAFVN 476
              LA VMSKKSLWNEG +P+SVKVEDRDRDRDRERDDGVKDR+ E RE+DRLDK+ AF N
Sbjct: 391  GFLAGVMSKKSLWNEGHLPRSVKVEDRDRDRDRERDDGVKDREHETRERDRLDKNGAFGN 450

Query: 477  KDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLN 536
            K+VG + S+++SKDKYLAKPI ELDLSNCERCTPSYRLLPKNY IPSASQRTELG+EVLN
Sbjct: 451  KEVGGQKSLFTSKDKYLAKPINELDLSNCERCTPSYRLLPKNYPIPSASQRTELGSEVLN 510

Query: 537  DHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINN 596
            DHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEK+NN
Sbjct: 511  DHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKVNN 570

Query: 597  NTIKTDGPIRVEDHFTALNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEW 656
            NTIK D PIR+E+HFTALNLRCIERLYGDHGLDVMDVLRKNA LALPVILTRLKQKQEEW
Sbjct: 571  NTIKMDSPIRIEEHFTALNLRCIERLYGDHGLDVMDVLRKNAPLALPVILTRLKQKQEEW 630

Query: 657  ARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDV 716
            ARCRSDFNKVWA+IY+KNYHKSLDHRSFYFKQQD+KSL  KAL AEIKEISEKKRKEDDV
Sbjct: 631  ARCRSDFNKVWADIYAKNYHKSLDHRSFYFKQQDTKSLSTKALLAEIKEISEKKRKEDDV 690

Query: 717  LLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLIKYSCGEMCTTEQLDKVMKIWTTFLEPM 776
            LLAIAAGNRR I+P+LEFEY DP+IHEDLYQL+KYSCGE+CTTEQLDKVMKIWTTFLEP+
Sbjct: 691  LLAIAAGNRRPIIPNLEFEYPDPEIHEDLYQLVKYSCGEVCTTEQLDKVMKIWTTFLEPI 750

Query: 777  LGVPSRPQGAEDTEDVVKAKSHTVKSRAASVGDSDGSPDGDAAA--MTSKHSNPSRNGDE 834
            LGVP+RPQGAEDTEDVVK+K+ TVK  + S G+SD SPD DA A    SK  N SRNGDE
Sbjct: 751  LGVPTRPQGAEDTEDVVKSKNLTVKRGSVSPGESDVSPDADANATLTNSKQLNSSRNGDE 810

Query: 835  SIPPEQSSSSRAWLPNGDHGIKEDVSVEADHNARKSDNFCDSSEQDKVQNNAAMADETSG 894
            SI PEQSSS R W  NG +G+KE+  ++ D  A K D FC++S+Q KVQ+N + ADETSG
Sbjct: 811  SIQPEQSSSCRTWTVNGANGVKEESLLDIDRAACKGDTFCNTSQQGKVQSNTSTADETSG 870

Query: 895  ISKQASTNERLIGTNAAIAAAADQSNGRSNIENTSGLSVAHSRPGNHIVEGGLELRSSNE 954
             SKQ   NERL+ +N ++A   +QSNGR+N+E++SG S   SRPGN  V+ GLE      
Sbjct: 871  ASKQDYFNERLVNSNVSLATGLEQSNGRTNLEHSSGHSPTPSRPGNGTVDVGLE------ 924

Query: 955  ILPSSEGGECSRQNISTNGVMTEGAKILRYNAESVKQFKIEREEGELSPNGDFEEDNFAV 1014
             LPSSE G+ +R  IS+NG + EGAK LRY  ES + FKIEREEGE+SPNGDFEEDNFA 
Sbjct: 925  -LPSSEVGDSTRPGISSNGAIAEGAKGLRYLEESARHFKIEREEGEISPNGDFEEDNFAN 983

Query: 1015 YGESGLEAVHKAK 1027
            Y E+G EA+ K+K
Sbjct: 984  YREAGSEAIQKSK 996


>gi|449478506|ref|XP_004155336.1| PREDICTED: LOW QUALITY PROTEIN: paired amphipathic helix protein
            Sin3-like 4-like [Cucumis sativus]
          Length = 1419

 Score = 1438 bits (3722), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 748/1037 (72%), Positives = 846/1037 (81%), Gaps = 48/1037 (4%)

Query: 1    MKRSRDEVYMNSQIKRPMISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQ 60
            MKRSRD+VYM SQ+KRP IS+R E S Q Q+    G G  QKLTTNDAL YLK VKDIFQ
Sbjct: 1    MKRSRDDVYMGSQLKRPAISTRAEASTQPQM---AGAGSTQKLTTNDALVYLKRVKDIFQ 57

Query: 61   DKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLED 120
            DKR++Y+DFLEVMKDFKAQRIDTAGVI RVK+LFKGHRDLILGFNTFLPKGYEITLPLED
Sbjct: 58   DKRQQYEDFLEVMKDFKAQRIDTAGVIGRVKDLFKGHRDLILGFNTFLPKGYEITLPLED 117

Query: 121  EQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALF 180
            +QP  KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEV ALF
Sbjct: 118  DQPTQKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVAALF 177

Query: 181  QDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQVHVDKKERAMASHA 240
            Q+HPDLL EFTHFLPDSS   S+HY  SGR  +LRDR SAMP+ RQ+ VD+K+R +ASHA
Sbjct: 178  QEHPDLLVEFTHFLPDSSATGSVHY-SSGRGLMLRDRHSAMPSMRQMQVDRKDRTIASHA 236

Query: 241  DRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERRDDHRRERERD---DRDFENDVNRDF 297
            +RDLSVDRP+PDHDR L+K DKDQRRRG+KE+ERRDD  R        DRD+E+D  RD 
Sbjct: 237  ERDLSVDRPEPDHDRALMKLDKDQRRRGDKEKERRDDRERREHDRERVDRDYEHDGRRDC 296

Query: 298  SMQRFPHKRKSARKIEDSTAEPLHQGGEGDENFGMHPVSSSYDDKNAMKSMFSQELSFCE 357
            +M RFPHKRKSAR+I+DS+AE LH G                        ++SQE +FCE
Sbjct: 297  NMHRFPHKRKSARRIDDSSAEQLHPG------------------------LYSQEYAFCE 332

Query: 358  KVKDKLRD--DYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLARCEKS 415
            +VK+KLR+  DYQEFL+CLH+Y+KEIITR+ELQSL+GDLLGRY DLMDGFN FL+RCE++
Sbjct: 333  RVKEKLRNSEDYQEFLKCLHIYSKEIITRAELQSLMGDLLGRYSDLMDGFNEFLSRCERN 392

Query: 416  EELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDR--ERDDGVKDRDREAREKDRLDKSVA 473
            +  LA V S+KSLWNEG +P++V+VEDRDRDRDR  E++D  KDRDRE RE+DRL+K+  
Sbjct: 393  DGFLAGVTSRKSLWNEGSLPRTVQVEDRDRDRDRDREKEDISKDRDRENRERDRLEKNTT 452

Query: 474  FVNKD-VGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGA 532
            F +KD VG +MS++SSKDKYLAKPI ELDLSNCERCTPSYRLLPKNY IPSASQRT+LG 
Sbjct: 453  FGSKDIVGHRMSVFSSKDKYLAKPINELDLSNCERCTPSYRLLPKNYPIPSASQRTDLGD 512

Query: 533  EVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLE 592
            +VLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLE
Sbjct: 513  QVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLE 572

Query: 593  KINNNTIKTDGPIRVEDHFTALNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQK 652
            KINNN IK D PI +EDH TALNLRCIERLYGDHGLDVMDVLRKNA LALPVILTRLKQK
Sbjct: 573  KINNNVIKADCPITIEDHLTALNLRCIERLYGDHGLDVMDVLRKNAPLALPVILTRLKQK 632

Query: 653  QEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRK 712
            QEEWARCR DFNKVWAEIY+KNYHKSLDHRSFYFKQQD+KSL  KAL AEIKEISEKKRK
Sbjct: 633  QEEWARCRYDFNKVWAEIYAKNYHKSLDHRSFYFKQQDTKSLSTKALLAEIKEISEKKRK 692

Query: 713  EDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLIKYSCGEMCTTEQLDKVMKIWTTF 772
            EDDVLLAIAAGNRR I+P+LEFEY DP++HEDLYQLIKYSCGE+C+TEQLDKVMK+WTTF
Sbjct: 693  EDDVLLAIAAGNRRPIIPNLEFEYPDPELHEDLYQLIKYSCGEICSTEQLDKVMKVWTTF 752

Query: 773  LEPMLGVPSRPQGAEDTEDVVKAKSHTVKSRAASVGDSDGSPDGDAAAMTSKHSNPSRNG 832
            LEPMLGVPSRP GAEDTEDV+KAK H  KS  A+V +SDGSP G A  M  K  N SRNG
Sbjct: 753  LEPMLGVPSRPHGAEDTEDVIKAKIHPTKS--ATVVESDGSPGGGATMMHPKQLNSSRNG 810

Query: 833  DESIPPEQSSSSRAWLPNGDHGIKEDVSVEADHNARKSDNFCDSSEQDKVQNNAAMADET 892
            DESIPPEQSSS R W  NGD+G+KED   +AD   RK D FC  S+  K+Q+N  + DE 
Sbjct: 811  DESIPPEQSSSCRTWPLNGDNGVKEDSFHDADRTVRKGDPFCSISQHTKIQDNVPVNDEL 870

Query: 893  SGISKQASTNERLIGTNAAIAAAADQSNGRSNIENTSGLSVAHSRPGNHIVEGGLELRSS 952
            SG+SKQ ++ E  + +N ++A AA+QSNG+ NIENTSGLS          VE G+E    
Sbjct: 871  SGVSKQDNSTECFVNSNVSLATAAEQSNGKPNIENTSGLSTTPRLGNGGAVESGIE---- 926

Query: 953  NEILPSSEGGECSRQNISTNGVMTEGAKILRYNAESVKQFKIEREEGELSPNGDFEEDNF 1012
               LPSSE G  +RQ ++ NG +T+G K  RY  E  +  KIEREEGELSPNGDFEEDNF
Sbjct: 927  ---LPSSEVGGPARQILTANGAVTDGTKGHRYAEEPARHLKIEREEGELSPNGDFEEDNF 983

Query: 1013 AVY-GESGLEAVHKAKD 1028
            A Y GE  L+A+ K K+
Sbjct: 984  ANYDGE--LKALPKVKE 998


>gi|356498069|ref|XP_003517876.1| PREDICTED: paired amphipathic helix protein Sin3-like 4-like [Glycine
            max]
          Length = 1414

 Score = 1400 bits (3623), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 734/1038 (70%), Positives = 848/1038 (81%), Gaps = 50/1038 (4%)

Query: 1    MKRSRDEVYMN-SQIKRPMISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIF 59
            MKRSRDEV  + SQ+KRP++SSRGE SGQ Q++ GG    AQKLTTNDALAYLKAVKDIF
Sbjct: 1    MKRSRDEVLTSCSQLKRPVLSSRGEASGQPQMMNGG----AQKLTTNDALAYLKAVKDIF 56

Query: 60   QDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLE 119
            QDKR+KYDDFLEVMKDFKAQRIDT GVIARVKELFKGHRDLILGFNTFLPKGYEITLP E
Sbjct: 57   QDKRDKYDDFLEVMKDFKAQRIDTVGVIARVKELFKGHRDLILGFNTFLPKGYEITLPSE 116

Query: 120  DEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEAL 179
            D+QP PKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKE+KSITEVYQEV A+
Sbjct: 117  DDQPAPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKEDKSITEVYQEVAAI 176

Query: 180  FQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQVHVDKKERAMASH 239
            FQDHPDLL+EFTHFLPD+S AAS HY  S RNS+LRDRSSAMPT RQ+HV+K+ER + SH
Sbjct: 177  FQDHPDLLDEFTHFLPDASAAASTHYA-SARNSMLRDRSSAMPTIRQLHVEKRERTIVSH 235

Query: 240  ADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERRDDHRRERERDDRDFENDVNRDFSM 299
             D D SVDRPDPDHDR LL+ +K++RR  +++  R D  +RERERDDRD+E+D  RD   
Sbjct: 236  GDHDPSVDRPDPDHDRGLLRIEKERRRVEKEKERREDRDKRERERDDRDYEHDGARD--R 293

Query: 300  QRFPHKRKSARKIEDSTAEPLHQGGEGDENFGMHPVSSSYDDKNAMKSMFSQELSFCEKV 359
            +RF HKR   RK EDS AEPL    + DENFGM                +SQE +FCEKV
Sbjct: 294  ERFSHKRN--RKAEDSGAEPLL---DADENFGM----------------YSQEFAFCEKV 332

Query: 360  KDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLARCEKSEE 417
            K+KLR  DDYQEFL+CLH+Y++EIITR ELQSLVGDLLG+YPDLM+GFN FL + EK++ 
Sbjct: 333  KEKLRNPDDYQEFLKCLHIYSREIITRHELQSLVGDLLGKYPDLMEGFNEFLLQSEKNDG 392

Query: 418  -LLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDD----GVKDRDREAREKDRLDKSV 472
              LA VM+KKSLWN+G   K +KVED+DRD+DR+RD     G+K+RDRE RE+D   KS 
Sbjct: 393  GFLAGVMNKKSLWNDGHGLKQIKVEDKDRDQDRDRDRYRDDGMKERDREFRERD---KST 449

Query: 473  AFVNKDV-GPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELG 531
            A  NKDV G KMS+Y SK+KYL+KPI ELDLSNC++CTPSYRLLPKNY IP ASQ+TELG
Sbjct: 450  AIANKDVLGSKMSLYPSKEKYLSKPINELDLSNCDQCTPSYRLLPKNYPIPVASQKTELG 509

Query: 532  AEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELL 591
            AEVLND+WVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELL
Sbjct: 510  AEVLNDYWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELL 569

Query: 592  EKINNNTIKTDGPIRVEDHFTALNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQ 651
            +KIN+N IK D PIR+E+H TA+NLRCIERLYGDHGLDVM+VLRKNA LALPVILTRLKQ
Sbjct: 570  DKINSNIIKGDSPIRIEEHLTAINLRCIERLYGDHGLDVMEVLRKNAPLALPVILTRLKQ 629

Query: 652  KQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKR 711
            KQEEWARCR+DF+KVW EIY+KNYHKSLDHRSFYFKQQD+KSL  KAL AEIKEI EKKR
Sbjct: 630  KQEEWARCRADFSKVWGEIYAKNYHKSLDHRSFYFKQQDTKSLSTKALLAEIKEICEKKR 689

Query: 712  KEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLIKYSCGEMCTTEQLDKVMKIWTT 771
            K DDVLLAIAAGNRR I+P+LEF+YSDPDIHEDLYQLIKYSCGE+CTTE +DKVMK+WTT
Sbjct: 690  K-DDVLLAIAAGNRRPILPNLEFKYSDPDIHEDLYQLIKYSCGEICTTEHVDKVMKVWTT 748

Query: 772  FLEPMLGVPSRPQGAEDTEDVVKAKSHTVKSRAASVGDSDGSPDGDAAAMTSKHSNPSRN 831
            FLEPML +PSRPQ AEDTEDVVK K++ V +  A+V +SD SP   A  M  KH N SRN
Sbjct: 749  FLEPMLCIPSRPQCAEDTEDVVKVKNNCVLNDTATVAESDCSPVVGATIMNPKHINVSRN 808

Query: 832  GDESIPPEQSSSSRAWLPNGDHGIKEDVSVEADHNARKSDNFCDSSEQDKVQNNAAMADE 891
            GDE +P +QS+SS+AW  NGD G++ED  ++ DH  RK++    +++  K+ + A   DE
Sbjct: 809  GDECMPLDQSTSSKAWQSNGDSGVREDRYLD-DHALRKTETLGSNTQHGKMNSIAFTPDE 867

Query: 892  TSGI-SKQASTNERLIGTNAAIAAAADQSNGRSNIENTSGLSVAHSRPGNHIVEGGLELR 950
             SG  +KQ  ++ERL+  N + A+  +QSNGR+NI+N SGL+   +RPGN  VEGGL+  
Sbjct: 868  PSGFNNKQDQSSERLVNANVSPASGMEQSNGRTNIDNLSGLTATPTRPGNASVEGGLD-- 925

Query: 951  SSNEILPSSEGGECSRQNISTNGVMTEGAKILRYNAESVKQFKIEREEGELSPNGDFEED 1010
                 +PSSEGG+ +R   STNG +T G K+ RY  ESV+ FK EREEGELSPNGDFEED
Sbjct: 926  -----IPSSEGGDSTRLGTSTNGAITGGTKVHRYQEESVRPFKNEREEGELSPNGDFEED 980

Query: 1011 NFAVYGESGLEAVHKAKD 1028
            NFA YG +GL+AVHK KD
Sbjct: 981  NFAFYGGNGLDAVHKGKD 998


>gi|449434867|ref|XP_004135217.1| PREDICTED: LOW QUALITY PROTEIN: paired amphipathic helix protein
            Sin3-like 4-like [Cucumis sativus]
          Length = 1397

 Score = 1397 bits (3616), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 730/1011 (72%), Positives = 825/1011 (81%), Gaps = 53/1011 (5%)

Query: 35   GGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELF 94
             G G  QKLTTNDAL YLK VKDIFQDKR++Y+DFLEVMKDFKAQRIDTAGVI RVK+LF
Sbjct: 2    AGAGSTQKLTTNDALVYLKRVKDIFQDKRQQYEDFLEVMKDFKAQRIDTAGVIGRVKDLF 61

Query: 95   KGHRDLILGFNTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKS 154
            KGHRDLILGFNTFLPKGYEITLPLED+QP  KKPVEFEEAINFVNKIKTRFQGDDHVYKS
Sbjct: 62   KGHRDLILGFNTFLPKGYEITLPLEDDQPTQKKPVEFEEAINFVNKIKTRFQGDDHVYKS 121

Query: 155  FLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSIL 214
            FLDILNMYRKENKSITEVYQEV ALFQ+HPDLL EFTHFLPDSS   S+HY  SGR  +L
Sbjct: 122  FLDILNMYRKENKSITEVYQEVAALFQEHPDLLVEFTHFLPDSSATGSVHY-SSGRGLML 180

Query: 215  RDRSSAMPTARQVHVDKKERAMASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERER 274
            RDR SAMP+ RQ+ VD+K+R +ASHA+RDLSVDRP+PDHDR L+K DKDQRRRG+KE+ER
Sbjct: 181  RDRHSAMPSMRQMQVDRKDRTIASHAERDLSVDRPEPDHDRALMKLDKDQRRRGDKEKER 240

Query: 275  RDDHRRERERD---DRDFENDVNRDFSMQRFPHKRKSARKIEDSTAEPLHQGGEGDENFG 331
            RDD  R        DRD+E+D  RD +M RFPHKRKSAR+I+DS+AE LH G        
Sbjct: 241  RDDRERREHDRERVDRDYEHDGRRDCNMHRFPHKRKSARRIDDSSAEQLHPG-------- 292

Query: 332  MHPVSSSYDDKNAMKSMFSQELSFCEKVKDKLRD--DYQEFLRCLHLYTKEIITRSELQS 389
                            ++SQE +FCE+VK+KLR+  DYQEFL+CLH+Y+KEIITR+ELQS
Sbjct: 293  ----------------LYSQEYAFCERVKEKLRNSEDYQEFLKCLHIYSKEIITRAELQS 336

Query: 390  LVGDLLGRYPDLMDGFNGFLARCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDR 449
            L+GDLLGRY DLMDGFN FL+RCE+++  LA V S+KSLWNEG +P++V+VEDRDRDRDR
Sbjct: 337  LMGDLLGRYSDLMDGFNEFLSRCERNDGFLAGVTSRKSLWNEGSLPRTVQVEDRDRDRDR 396

Query: 450  --ERDDGVKDRDREAREKDRLDKSVAFVNKD-VGPKMSMYSSKDKYLAKPIQELDLSNCE 506
              E++D  KDRDRE RE+DRL+K+  F +KD VG +MS++SSKDKYLAKPI ELDLSNCE
Sbjct: 397  DREKEDISKDRDRENRERDRLEKNTTFGSKDIVGHRMSVFSSKDKYLAKPINELDLSNCE 456

Query: 507  RCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRC 566
            RCTPSYRLLPKNY IPSASQRT+LG +VLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRC
Sbjct: 457  RCTPSYRLLPKNYPIPSASQRTDLGDQVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRC 516

Query: 567  EDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFTALNLRCIERLYGDH 626
            EDDRFELDMLLESVNVTTKRVEELLEKINNN IK D PI +EDH TALNLRCIERLYGDH
Sbjct: 517  EDDRFELDMLLESVNVTTKRVEELLEKINNNVIKADCPITIEDHLTALNLRCIERLYGDH 576

Query: 627  GLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYF 686
            GLDVMDVLRKNA LALPVILTRLKQKQEEWARCR DFNKVWAEIY+KNYHKSLDHRSFYF
Sbjct: 577  GLDVMDVLRKNAPLALPVILTRLKQKQEEWARCRYDFNKVWAEIYAKNYHKSLDHRSFYF 636

Query: 687  KQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDP------- 739
            KQQD+KSL  KAL AEIKEISEKKRKEDDVLLAIAAGNRR I+P+LEFEY DP       
Sbjct: 637  KQQDTKSLSTKALLAEIKEISEKKRKEDDVLLAIAAGNRRPIIPNLEFEYPDPASXRLIS 696

Query: 740  DIHEDLYQLIKYSCGEMCTTEQLDKVMKIWTTFLEPMLGVPSRPQGAEDTEDVVKAKSHT 799
            ++HEDLYQLIKYSCGE+C+TEQLDKVMK+WTTFLEPMLGVPSRP GAEDTEDV+KAK H 
Sbjct: 697  ELHEDLYQLIKYSCGEICSTEQLDKVMKVWTTFLEPMLGVPSRPHGAEDTEDVIKAKIHP 756

Query: 800  VKSRAASVGDSDGSPDGDAAAMTSKHSNPSRNGDESIPPEQSSSSRAWLPNGDHGIKEDV 859
             KS  A+V +SDGSP G A  M  K  N SRNGDESIPPEQSSS R W  NGD+G+KED 
Sbjct: 757  TKS--ATVVESDGSPGGGATMMHPKQLNSSRNGDESIPPEQSSSCRTWPLNGDNGVKEDS 814

Query: 860  SVEADHNARKSDNFCDSSEQDKVQNNAAMADETSGISKQASTNERLIGTNAAIAAAADQS 919
              +AD   RK D FC  S+  K+Q+N  + DE SG+SKQ ++ E  + +N ++A AA+QS
Sbjct: 815  FHDADRTVRKGDPFCSISQHTKIQDNVPVNDELSGVSKQDNSTECFVNSNVSLATAAEQS 874

Query: 920  NGRSNIENTSGLSVAHSRPGN-HIVEGGLELRSSNEILPSSEGGECSRQNISTNGVMTEG 978
            NG+ NIENTSGLS   SR GN   VE G+E       LP+SE G  +RQ ++ NG +T+G
Sbjct: 875  NGKPNIENTSGLSTTPSRLGNGGAVESGIE-------LPTSEVGGPTRQILTANGAVTDG 927

Query: 979  AKILRYNAESVKQFKIEREEGELSPNGDFEEDNFAVY-GESGLEAVHKAKD 1028
             K  RY  E  +  KIEREEGELSPNGDFEEDNFA Y GE  L+A+ K K+
Sbjct: 928  TKGHRYAEEPARHLKIEREEGELSPNGDFEEDNFANYDGE--LKALPKVKE 976


>gi|356500930|ref|XP_003519283.1| PREDICTED: paired amphipathic helix protein Sin3-like 4-like [Glycine
            max]
          Length = 1407

 Score = 1361 bits (3523), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 721/1040 (69%), Positives = 834/1040 (80%), Gaps = 60/1040 (5%)

Query: 1    MKRSRDEVYMN-SQIKRPMISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIF 59
            MKRSRDEV+ + SQ+KRP++SSRGE SGQ Q++ GG    AQKLTTNDALAYLKAVKDIF
Sbjct: 1    MKRSRDEVFTSCSQLKRPVVSSRGEASGQPQIMNGG----AQKLTTNDALAYLKAVKDIF 56

Query: 60   QDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLE 119
            QDKR+KYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLP E
Sbjct: 57   QDKRDKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPSE 116

Query: 120  DEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEAL 179
            DEQ  PKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEV A+
Sbjct: 117  DEQLAPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVAAI 176

Query: 180  FQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQVHVDKKERAMASH 239
            FQDHPDLL+EFTHFLPD+S AAS H+V S RNS+LRDRSSAMPT RQ+HV+K+ER + SH
Sbjct: 177  FQDHPDLLDEFTHFLPDASAAASTHFV-SARNSMLRDRSSAMPTIRQLHVEKRERTIVSH 235

Query: 240  ADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERRDDHRRERERDDRDFENDVNRDFSM 299
             D D SVDRPDPD+DR LL+ +K++RR  +++  R D  +R+RERDDRDFE+D  RD   
Sbjct: 236  GDHDPSVDRPDPDNDRGLLRIEKERRRVEKEKERREDRDKRDRERDDRDFEHDGARD--R 293

Query: 300  QRFPHKRKSARKIEDSTAEPLHQGGEGDENFGMHPVSSSYDDKNAMKSMFSQELSFCEKV 359
            +RF HKR   RKI  S             NF              +  M+SQE +FCE V
Sbjct: 294  ERFSHKRN--RKISTS-------------NF-------------VISGMYSQEFAFCENV 325

Query: 360  KDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLARCEKSEE 417
            K+KLR  DDYQEFL+CLH+Y++EIITR ELQSLVGDLLG+YPDLM+GFN FL + EK++ 
Sbjct: 326  KEKLRNPDDYQEFLKCLHIYSREIITRHELQSLVGDLLGKYPDLMEGFNEFLLQSEKNDG 385

Query: 418  -LLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDG------VKDRDREAREKDRLDK 470
              LA VM+KKSLWN+G   K +KV+D DRDRDR+RD        +K+RDRE RE+D   K
Sbjct: 386  GFLAGVMNKKSLWNDGHGLKQIKVDDGDRDRDRDRDRDRYRDDGMKERDREFRERD---K 442

Query: 471  SVAFVNKDV-GPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTE 529
            S    NKDV G KMS+Y SK+KYL+KPI ELDLSNC++CTPSYRLLPKNY IP ASQ+TE
Sbjct: 443  STVIANKDVLGSKMSLYPSKEKYLSKPINELDLSNCDQCTPSYRLLPKNYPIPVASQKTE 502

Query: 530  LGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEE 589
            LGA VLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEE
Sbjct: 503  LGAGVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEE 562

Query: 590  LLEKINNNTIKTDGPIRVEDHFTALNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRL 649
            LL+KIN+N IK D  IR+E+H TA+NLRCIERLYGDHGLDVM+VLRKNA LALPVILTRL
Sbjct: 563  LLDKINSNIIKGDSLIRIEEHLTAINLRCIERLYGDHGLDVMEVLRKNAPLALPVILTRL 622

Query: 650  KQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEK 709
            KQKQEEWARCR+DF+KVW EIY+KNYHKSLDHRSFYFKQQD+KSL  KAL AEIKEISEK
Sbjct: 623  KQKQEEWARCRADFSKVWGEIYAKNYHKSLDHRSFYFKQQDTKSLSTKALLAEIKEISEK 682

Query: 710  KRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLIKYSCGEMCTTEQLDKVMKIW 769
            KRKEDDVLLAIAAGNRR I+P+LEF+YSDPDIHEDLYQLIKYS GE+CTTE +DKVMK+W
Sbjct: 683  KRKEDDVLLAIAAGNRRPILPNLEFKYSDPDIHEDLYQLIKYSSGEICTTEHVDKVMKVW 742

Query: 770  TTFLEPMLGVPSRPQGAEDTEDVVKAKSHTVKSRAASVGDSDGSPDGDAAAMTSKHSNPS 829
            TTFLEPML VP RPQGAEDTEDVVKAK++ VK+  A+V +SD SP   A  M  KH N S
Sbjct: 743  TTFLEPMLCVPCRPQGAEDTEDVVKAKNNHVKNGTATVAESDCSPVVGAIIMNPKHINVS 802

Query: 830  RNGDESIPPEQSSSSRAWLPNGDHGIKEDVSVEADHNARKSDNFCDSSEQDKVQNNAAMA 889
            RNGD+ +P +QS+S++AW  NG  G++ED  ++ D   RK++    +++  K+   A   
Sbjct: 803  RNGDDCMPLDQSTSNKAWQSNG--GVREDRYLD-DCALRKTETLGSNTQHGKMNRIAFTP 859

Query: 890  DETSGI-SKQASTNERLIGTNAAIAAAADQSNGRSNIENTSGLSVAHSRPGNHIVEGGLE 948
            D  SG  +KQ  ++ERL+  N + A+  +QSNGR+NI+N SGL+   +RPGN  VEGGL+
Sbjct: 860  DGPSGFNNKQDQSSERLVNANVSPASGMEQSNGRTNIDNLSGLTATPTRPGNASVEGGLD 919

Query: 949  LRSSNEILPSSEGGECSRQNISTNGVMTEGAKILRYNAESVKQFKIEREEGELSPNGDFE 1008
                   +PSSEGG+ +R   STNG +T G K+ RY  ESV+ FK EREEGELSPNGDFE
Sbjct: 920  -------IPSSEGGDSTRLGTSTNGAITGGTKVHRYQEESVRAFKSEREEGELSPNGDFE 972

Query: 1009 EDNFAVYGESGLEAVHKAKD 1028
            EDN  VYG +GL+AVHK KD
Sbjct: 973  EDNSEVYGGNGLDAVHKGKD 992


>gi|356526870|ref|XP_003532039.1| PREDICTED: paired amphipathic helix protein Sin3-like 3-like [Glycine
            max]
          Length = 1404

 Score = 1353 bits (3503), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 699/1035 (67%), Positives = 804/1035 (77%), Gaps = 53/1035 (5%)

Query: 1    MKRSRDEVYMNSQIKRPMISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQ 60
            MKRSRD+VYM+SQ+KRPM+SSRGEPSGQ Q+  GG    AQKLTT+DALAYLKAVKD+FQ
Sbjct: 1    MKRSRDDVYMSSQLKRPMVSSRGEPSGQPQMTSGG----AQKLTTDDALAYLKAVKDMFQ 56

Query: 61   DKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLED 120
            DKREKYDDFLEVMKDFKAQRIDT+GVIARVKELFKGH+DLILGFNTFLPKGYEITLPLED
Sbjct: 57   DKREKYDDFLEVMKDFKAQRIDTSGVIARVKELFKGHKDLILGFNTFLPKGYEITLPLED 116

Query: 121  EQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALF 180
            EQPP KKPVEF EAINFV KIK RF  +D VYKSFLDILNMYR+E KSI EVY+EV ALF
Sbjct: 117  EQPPQKKPVEFAEAINFVGKIKARFHDNDRVYKSFLDILNMYRREAKSIAEVYKEVAALF 176

Query: 181  QDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQVHVDKKERAMASHA 240
            QDH DLL EFTHFLPD+SG AS H     RNS+L DRSSAMP  RQ+HV+K+ER +ASH 
Sbjct: 177  QDHVDLLREFTHFLPDTSGTASNH-CGLARNSLLPDRSSAMPIIRQMHVEKRERNIASHG 235

Query: 241  DRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERRDDHRRERERDDRDFENDVNRDFSMQ 300
            DRDLS D PDP+ DR L+++DKDQRR  EKE+                     +RD+   
Sbjct: 236  DRDLSADHPDPELDRCLIRADKDQRRHDEKEKG--------------------SRDYDHD 275

Query: 301  RFPHKRKSARKIEDSTAEPLHQGGEGDENFGMHPVSSSYDDKNAMKSMFSQELSFCEKVK 360
                KRKS  + EDS AEPLH   + DENFGMHP+S + +DK+++KSM+S  L + +KVK
Sbjct: 276  GISRKRKSGIRAEDSGAEPLH---DTDENFGMHPISYACEDKSSLKSMYSPVLGYLDKVK 332

Query: 361  DKLRD--DYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLARCEKSEEL 418
            +KLR+  DYQEFL+CL++Y+KEII R ELQSLVG+LLG++ DLM+GF+ FL +CEK+E  
Sbjct: 333  EKLRNPEDYQEFLKCLNIYSKEIIARHELQSLVGNLLGKHADLMEGFDEFLVQCEKNEGF 392

Query: 419  LADVMSKK---SLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRLDKSVAFV 475
            LA ++ K    S W+EG  PK VKVEDRDRDRDR+   G+K+RDRE RE+D   KS A  
Sbjct: 393  LAGLLKKSKYHSFWHEGHGPKPVKVEDRDRDRDRDD--GMKERDRECRERD---KSNAIA 447

Query: 476  NKDV-GPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEV 534
            NKDV  PK S+Y+ KDKY AKPI ELDLSNCE+CTPSY LLPKNY IP ASQRTELGAEV
Sbjct: 448  NKDVLVPKTSLYAGKDKYAAKPISELDLSNCEQCTPSYCLLPKNYPIPPASQRTELGAEV 507

Query: 535  LNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKI 594
            LNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNV TKRVEELLEK+
Sbjct: 508  LNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVATKRVEELLEKV 567

Query: 595  NNNTIKTDGPIRVEDHFTALNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQE 654
            N N IK D PIR+E+H TALNLRCIERLYGDHGLDVMDVL+KNASLALPVILTRLKQKQ+
Sbjct: 568  NANIIKGDSPIRIEEHLTALNLRCIERLYGDHGLDVMDVLKKNASLALPVILTRLKQKQD 627

Query: 655  EWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKED 714
            EWARCRSDFNKVWAEIY+KNYHKSLDHRSFYFKQQD+KSL  K L AEIKEISEKKRKED
Sbjct: 628  EWARCRSDFNKVWAEIYAKNYHKSLDHRSFYFKQQDTKSLSTKVLLAEIKEISEKKRKED 687

Query: 715  DVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLIKYSCGEMCTTEQLDKVMKIWTTFLE 774
            DVLLAIAAGNR+ I+PHLEF Y D +IHEDLYQLIKYSCGEMCTTEQLDK MKIWTTFLE
Sbjct: 688  DVLLAIAAGNRQPIIPHLEFVYPDSEIHEDLYQLIKYSCGEMCTTEQLDKAMKIWTTFLE 747

Query: 775  PMLGVPSRPQGAEDTEDVVKAKSHTVKSRAASVGDSDGSPDGDAAAMTSKHSNPSRNGDE 834
            PMLGVPSRPQG  DTEDVVKA  +        + D D SP     A   K+ N +RNGDE
Sbjct: 748  PMLGVPSRPQGPVDTEDVVKANKNNSAKTGTGIDDGDSSP-----ATNPKNLNTNRNGDE 802

Query: 835  SIPPEQSSSSRAWLPNGDHGIKEDVSVEADHNARKSDNFCDSSEQDKVQNNAAMADETSG 894
            + P EQS+S + W  +GD+ +KED  ++ + +A K++    S++  KV  NA+  DE S 
Sbjct: 803  NFPSEQSNSCKQWQTSGDNKVKEDNHLDLERSAHKNETLGSSTQHGKVHINASTTDEVSR 862

Query: 895  ISKQASTNERLIGTNAAIAAAADQSNGRSNIENTSGLSVAHSRPGNHIVEGGLELRSSNE 954
             +KQ  + ERL+  N ++    +  + R+N++N SGL+   SRPGN   EGGL       
Sbjct: 863  ANKQDHSIERLVNANVSLTLGMELISRRTNVDNASGLTATPSRPGNISGEGGLG------ 916

Query: 955  ILPSSEGGECSRQNISTNGVMTEGAKILRYNAESVKQFKIEREEGELSPN-GDFEEDNFA 1013
             LPS EG + +R   STNG + E  K+ RY+ E V  FK EREEGELSPN GDFEEDN  
Sbjct: 917  -LPSLEGADSTRPVTSTNGAINEDTKVHRYH-EEVGHFKSEREEGELSPNGGDFEEDNCE 974

Query: 1014 VYGESGLEAVHKAKD 1028
            VYG +GLEAVHK KD
Sbjct: 975  VYGHAGLEAVHKGKD 989


>gi|224107859|ref|XP_002314629.1| SIN3 component, histone deacetylase complex [Populus trichocarpa]
 gi|222863669|gb|EEF00800.1| SIN3 component, histone deacetylase complex [Populus trichocarpa]
          Length = 1385

 Score = 1325 bits (3430), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 737/1033 (71%), Positives = 811/1033 (78%), Gaps = 101/1033 (9%)

Query: 41   QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDL 100
            QKLTTNDALAYLKAVKDIFQD REKYD+FLEVMKDFKAQRIDTAGVIARVKELFKGHRDL
Sbjct: 12   QKLTTNDALAYLKAVKDIFQDNREKYDEFLEVMKDFKAQRIDTAGVIARVKELFKGHRDL 71

Query: 101  ILGFNTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILN 160
            ILGFNTFLPKGYEITLPLEDEQPP KKPVEFEEAINFVNKIKTRFQGDD VYKSFLDILN
Sbjct: 72   ILGFNTFLPKGYEITLPLEDEQPPQKKPVEFEEAINFVNKIKTRFQGDDRVYKSFLDILN 131

Query: 161  MYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSA 220
            +YRKENKSI+EVYQEV +LF+DH DLL EFTHFLPDSS AAS H+ P+GRN  LRDRSSA
Sbjct: 132  LYRKENKSISEVYQEVASLFRDHHDLLLEFTHFLPDSSAAASAHF-PTGRNPALRDRSSA 190

Query: 221  MPTARQVHVDKKERAMASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERRDDHRR 280
            MPT RQ+HVDKKERA ASHADRD SVDRPDPDHDR ++++DKDQRRR EKE+ERR+D  R
Sbjct: 191  MPTMRQMHVDKKERATASHADRDFSVDRPDPDHDRSMIRADKDQRRRAEKEKERREDRDR 250

Query: 281  ERERDDRD-FENDVNRDFSMQRFPHKRKSARKIEDSTAEPLHQGGEGDENFG-MHPVSSS 338
                 D   +++D NRDF+MQR PHKRKSA ++EDS AE   QGG+GDE FG M+PVSS+
Sbjct: 251  RERERDDRDYDHDGNRDFNMQRLPHKRKSAPRVEDSVAE---QGGDGDETFGGMNPVSSA 307

Query: 339  YDDKNAMKSMFSQELSFCEKVKDKLRD--DYQEFLRCLHLYTKEIITRSELQSLVGDLLG 396
            YDDKN +KS  SQEL+FC+KVK+ L D  +YQEFLRCLHLYT+EIITRSELQSLVGDLLG
Sbjct: 308  YDDKNTVKSALSQELAFCDKVKETLLDPDNYQEFLRCLHLYTREIITRSELQSLVGDLLG 367

Query: 397  RYPDLMDGFNGFLARCEKSEELLADVMSK---KSLWNE-GRIPKSVKVEDRDRDRDRERD 452
            RYPDLMD FN FLARCEK+E LLA V+SK   + L N+   +P++VKVEDRDRDRDRERD
Sbjct: 368  RYPDLMDDFNEFLARCEKNEGLLAGVVSKILVQLLPNQPCNLPRAVKVEDRDRDRDRERD 427

Query: 453  DGVKDRDREAREKDRLDKSVAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSY 512
            DGVKDRDRE RE+DRLDK+                       KPI ELDLSNCERC+PSY
Sbjct: 428  DGVKDRDREIRERDRLDKT-----------------------KPINELDLSNCERCSPSY 464

Query: 513  RLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFE 572
            RLLPK+Y+IPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFE
Sbjct: 465  RLLPKSYMIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFE 524

Query: 573  LDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFTALNLRCIERLYGDHGLDVMD 632
            LDMLLESVNVTTKRVEELLEKINNNTIK D PIR+++H TALNLRCIERLYGDHGLDVMD
Sbjct: 525  LDMLLESVNVTTKRVEELLEKINNNTIKMDSPIRIDEHLTALNLRCIERLYGDHGLDVMD 584

Query: 633  VLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSK 692
            VLRKN SLALPV+LTRLKQKQEEWARCR+DFNKVWAEIY+KNYHKSLDHRSFYFKQQD+K
Sbjct: 585  VLRKNTSLALPVVLTRLKQKQEEWARCRADFNKVWAEIYAKNYHKSLDHRSFYFKQQDTK 644

Query: 693  SLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLIKYS 752
            S   KAL  EIKEISE KRKEDDVLLA AAGNRR I+P+LEFEY D DIHEDLYQLIKYS
Sbjct: 645  SSSTKALLVEIKEISENKRKEDDVLLAFAAGNRRPIIPNLEFEYPDTDIHEDLYQLIKYS 704

Query: 753  CGEMCTTEQLDKVMKIWTTFLEPMLGVPSRPQGAEDTEDVVKAKSHTVKSRAASVGDSDG 812
            CGE+CT+EQLDKVMKIWTTFLEPMLGVPSRPQGAEDTEDVVKAK+ + KS  +       
Sbjct: 705  CGEVCTSEQLDKVMKIWTTFLEPMLGVPSRPQGAEDTEDVVKAKNQSSKSGESEG----- 759

Query: 813  SPDGDAAAMT-SKHSNPSRNGDESIPPEQSSSSRAWLPNGDHGIKEDVSVEADHNARKSD 871
            SP G  AA+T SKHSN SRNGDESIPPEQS                      +H ARKSD
Sbjct: 760  SPSGAGAAVTNSKHSNSSRNGDESIPPEQS----------------------NHVARKSD 797

Query: 872  NFCDSSEQDKVQNN----AAMADETSGISKQASTNERLIGTNA----------------- 910
                + + DKV  N    AA A+E SGI+KQA++N+RL+ +N                  
Sbjct: 798  TSTSALQHDKVVINAAASAAAAEELSGITKQAASNDRLLNSNVCWMLPILSNLHYFLTSL 857

Query: 911  --------AIAAAADQSNGRSNIENTSGLSVAHSRPGNHIVEGGLELRSSNEILPSSEGG 962
                    + +        + NI    GLS   SRP N  VEGGL + SSNEILPS+E  
Sbjct: 858  SLLLLVPTSFSLKLMARFLKCNIL-FQGLSATPSRPSNGTVEGGLGIGSSNEILPSTEVW 916

Query: 963  ECSRQNISTNGV-------MTEGAKILRYNAESVKQFKIEREEGELSPNGDFEEDNFAVY 1015
             C    +  N +        TE  K  RYN ES  QFKIEREEGELSPNGDFEEDNFA Y
Sbjct: 917  -CFHILVYINFLSLFLIRPSTEVIKNHRYNDESAAQFKIEREEGELSPNGDFEEDNFAFY 975

Query: 1016 GESGLEAVHKAKD 1028
            GE+GLEA HKAKD
Sbjct: 976  GEAGLEAAHKAKD 988


>gi|224100205|ref|XP_002311786.1| SIN3 component, histone deacetylase complex [Populus trichocarpa]
 gi|222851606|gb|EEE89153.1| SIN3 component, histone deacetylase complex [Populus trichocarpa]
          Length = 1343

 Score = 1324 bits (3427), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 699/997 (70%), Positives = 777/997 (77%), Gaps = 85/997 (8%)

Query: 36   GGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFK 95
            GGGG QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFK
Sbjct: 3    GGGGGQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFK 62

Query: 96   GHRDLILGFNTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSF 155
            GHRDLILGFNTFLPKGYEITLPLE+EQPP KKPVEFEEAINFVNKIKTRFQGDDHVYKSF
Sbjct: 63   GHRDLILGFNTFLPKGYEITLPLEEEQPPQKKPVEFEEAINFVNKIKTRFQGDDHVYKSF 122

Query: 156  LDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILR 215
            LDILNMYRKENKSI+EVYQEV ALF+DH DLL EFTHFLPDSS AAS  + PS RNS  R
Sbjct: 123  LDILNMYRKENKSISEVYQEVAALFRDHHDLLLEFTHFLPDSSAAASALF-PSARNSAPR 181

Query: 216  DRSSAMPTARQVHVDKKERAMASHADRDLSVDRPDPDHDRVLLKSDKDQRRR-GEKERER 274
            DRSSAMPT RQ+HVDKKERAMASHA+RD+SVDRPDPDHDR ++++DKDQRRR  +++  R
Sbjct: 182  DRSSAMPTMRQMHVDKKERAMASHAERDISVDRPDPDHDRAMIRADKDQRRRVEKEKERR 241

Query: 275  RDDHRRERERDDRDFENDVNRDFSMQRFPHKRKSARKIEDSTAEPLHQGGEGDENFG-MH 333
             D  RR+ ERDDRD+++D NRDF+ QRFPHKRK AR++EDS AE   QGG+GDE+FG M+
Sbjct: 242  EDRDRRDCERDDRDYDHDGNRDFN-QRFPHKRKPARRVEDSAAE---QGGDGDESFGGMN 297

Query: 334  PVSSSYDDKNAMKSMFSQELSFCEKVKDKLRD--DYQEFLRCLHLYTKEIITRSELQSLV 391
            PVSS+YDDKNA+KS  SQEL+FC+KVK+ L +  +YQEFLRCLHLYT+EIITRSELQSLV
Sbjct: 298  PVSSAYDDKNAVKSALSQELAFCDKVKETLHNPENYQEFLRCLHLYTREIITRSELQSLV 357

Query: 392  GDLLGRYPDLMDGFNGFLARCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRER 451
            GDLLG+YPDLMDGFN FLA CEK E LLA V+SK  L           +           
Sbjct: 358  GDLLGKYPDLMDGFNEFLALCEKKEGLLAGVVSKSKLMFTNLFQNHCGM----------- 406

Query: 452  DDGVKDRDREAREKDRLDKSVAFVNKDVGPKM-SMYSSKDKYLAK--PIQELDLSNCERC 508
                           + +  +  V + +G K+ ++ S K   L K  P+  L        
Sbjct: 407  ---------------KTEIEIGIVREMMGSKIETVKSEKGIGLTKQNPLMNLTYLTASAA 451

Query: 509  TPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCED 568
             P      + Y+IP ASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCED
Sbjct: 452  LPVIGFYQR-YMIPPASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCED 510

Query: 569  DRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFTALNLRCIERLYGDHGL 628
            DRFELDMLLESVNVTTKRVEELLEKINNNTIK D PIR+++H TALNLRC+ERLYGDHGL
Sbjct: 511  DRFELDMLLESVNVTTKRVEELLEKINNNTIKMDSPIRIDEHLTALNLRCVERLYGDHGL 570

Query: 629  DVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQ 688
            DVMDVLRKN SLALPVILTRLKQKQEEWARCR+DFNKVWAEIY+KNYHKSLDHRSFYFKQ
Sbjct: 571  DVMDVLRKNTSLALPVILTRLKQKQEEWARCRADFNKVWAEIYAKNYHKSLDHRSFYFKQ 630

Query: 689  QDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQL 748
            QD+KSL  KAL AEIKEISE KRKEDDVLLA AAGNRR I+P+LEFEY DPD HEDLYQL
Sbjct: 631  QDTKSLSTKALLAEIKEISENKRKEDDVLLAFAAGNRRPIIPNLEFEYLDPDTHEDLYQL 690

Query: 749  IKYSCGEMCTTEQLDKVMKIWTTFLEPMLGVPSRPQGAEDTEDVVKAKSHTVKSRAASVG 808
            IKYSC E+CTTEQLDKVMKIWTTFLEPMLGVPSRPQGAEDTEDVVKAK+ + KS  +   
Sbjct: 691  IKYSCAEVCTTEQLDKVMKIWTTFLEPMLGVPSRPQGAEDTEDVVKAKNQSSKSGESEG- 749

Query: 809  DSDGSPDGDAAAMTSKHSNPSRNGDESIPPEQSSSSRAWLPNGDHGIKEDVSVEADHNAR 868
                SP G  A   SKHSNPSRNGDESI PEQSSSSRAW+ NG++ +KE+ S +ADH AR
Sbjct: 750  ----SPSGGGAVTNSKHSNPSRNGDESIQPEQSSSSRAWMLNGENRVKENGSPDADHVAR 805

Query: 869  KSDNFCDSSEQDKVQNNAAMADETSGISKQASTNERLIGTNAAIAAAADQSNGRSNIENT 928
            KSD    + + DKV  NAA ADE SG++KQA +N+RL+ +NA++                
Sbjct: 806  KSDTSTSTLQHDKVLINAAAADELSGVTKQAPSNDRLLNSNASLVT-------------- 851

Query: 929  SGLSVAHSRPGNHIVEGGLELRSSNEILPSSEGGECSRQNISTNGVMTEGAKILRYNAES 988
                             G EL+          GGE SR  +STNGV TE  K  RYN ES
Sbjct: 852  -----------------GAELK----------GGEFSRPPVSTNGVATEVIKSNRYNDES 884

Query: 989  VKQFKIEREEGELSPNGDFEEDNFAVYGESGLEAVHK 1025
              QFKIEREEGELSPNGDFEEDNFAVYGE+GLEA HK
Sbjct: 885  AAQFKIEREEGELSPNGDFEEDNFAVYGEAGLEAAHK 921


>gi|356567584|ref|XP_003551998.1| PREDICTED: paired amphipathic helix protein Sin3-like 4-like [Glycine
            max]
          Length = 1367

 Score = 1291 bits (3340), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 676/1034 (65%), Positives = 780/1034 (75%), Gaps = 88/1034 (8%)

Query: 1    MKRSRDEVYMNSQIKRPMISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQ 60
            MKR+RD+VYM+SQ+KRPM+SSRGEPSGQ Q+  GGG    QKLTTNDALAYL+AVKDIFQ
Sbjct: 1    MKRTRDDVYMSSQLKRPMVSSRGEPSGQPQMTSGGG----QKLTTNDALAYLRAVKDIFQ 56

Query: 61   DKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLED 120
            DKREKYDDFLEVMKDFKAQRIDT+GVIARVKELFKGH+DLILGFNTFLPKGYEITLPLED
Sbjct: 57   DKREKYDDFLEVMKDFKAQRIDTSGVIARVKELFKGHKDLILGFNTFLPKGYEITLPLED 116

Query: 121  EQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALF 180
            EQPP KKPVEF EAINFV KIK RF  +D VYKSFLDILNMYR E KSI EVY+EV ALF
Sbjct: 117  EQPPQKKPVEFAEAINFVGKIKARFYANDRVYKSFLDILNMYRMEAKSIAEVYKEVAALF 176

Query: 181  QDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQVHVDKKERAMASHA 240
            QDH DLL EFTHFLPD+SG A+        NS+L DR+    T RQ+HV+KKER +ASH 
Sbjct: 177  QDHVDLLREFTHFLPDTSGTAN--------NSLLHDRT----TIRQMHVEKKERNIASHG 224

Query: 241  DRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERRDDHRRERERDDRDFENDVNRDFSMQ 300
            DRDL  D PDP+ DR L+++DKDQRRR EKE+            D RD+++D        
Sbjct: 225  DRDLGADHPDPELDRCLIRADKDQRRRDEKEK------------DSRDYDHD-------- 264

Query: 301  RFPHKRKSARKIEDSTAEPLHQGGEGDENFGMHPVSSSYDDKNAMKSMFSQELSFCEKVK 360
               HKRKS  + EDS             +F              +  M+S  L + +KVK
Sbjct: 265  GISHKRKSGCRAEDS-------------DF-------------VVSGMYSPVLGYLDKVK 298

Query: 361  DKLRD--DYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLARCEKSEEL 418
            DKLR+  DYQEFL+CL++Y+KEII R ELQSLVG+LLG++ DLM+GF+ FLA+CEK+E  
Sbjct: 299  DKLRNPEDYQEFLKCLNIYSKEIIARHELQSLVGNLLGKHADLMEGFDEFLAQCEKNEGF 358

Query: 419  LADVMSKK---SLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRLDKSVAFV 475
            LA ++ K    S ++EG  PK VKVEDRD+DRDR+   G+K+RDRE RE+D+     A  
Sbjct: 359  LAGLLKKSKYHSFFHEGHGPKPVKVEDRDQDRDRDD--GMKERDRECRERDK-----ATA 411

Query: 476  NKDVG-PKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEV 534
            NKDV  PK S+Y+SKDKY AKPI ELDLSNCE+CTPSYRLLPKNY IP ASQRTELGAEV
Sbjct: 412  NKDVSVPKTSLYTSKDKYAAKPISELDLSNCEQCTPSYRLLPKNYPIPPASQRTELGAEV 471

Query: 535  LNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKI 594
            LNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNV TKRVEELLEK+
Sbjct: 472  LNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVATKRVEELLEKV 531

Query: 595  NNNTIKTDGPIRVEDHFTALNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQE 654
            N N IK D PI +E+H TALNLRCIERLYGDHGLDVMDVL+KNASLALPVILTRLKQKQ+
Sbjct: 532  NANIIKGDSPICIEEHLTALNLRCIERLYGDHGLDVMDVLKKNASLALPVILTRLKQKQD 591

Query: 655  EWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKED 714
            EWARCR+DFNKVWAEIY+KNYHKSLDHRSFYFKQQD+KSL  K L AEIKEISEKKRKED
Sbjct: 592  EWARCRADFNKVWAEIYAKNYHKSLDHRSFYFKQQDTKSLSTKVLLAEIKEISEKKRKED 651

Query: 715  DVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLIKYSCGEMCTTEQLDKVMKIWTTFLE 774
            DVLLAIAAGNR+  +PHLEF Y DP+IHEDLYQLIKYSCGEMCTTEQLDK MKIWTTFLE
Sbjct: 652  DVLLAIAAGNRQPFIPHLEFVYPDPEIHEDLYQLIKYSCGEMCTTEQLDKAMKIWTTFLE 711

Query: 775  PMLGVPSRPQGAEDTEDVVKAKSHTVKSRAASVGDSDGSPDGDAAAMTSKHSNPSRNGDE 834
            PMLGVPSRPQG EDTEDVVKA  +       ++ D D SP         K+ N  RN DE
Sbjct: 712  PMLGVPSRPQGPEDTEDVVKANKNNSSKSGTAIDDGDSSP-----VTNPKNLNTKRNEDE 766

Query: 835  SIPPEQSSSSRAWLPNGDHGIKEDVSVEADHNARKSDNFCDSSEQDKVQNNAAMADETSG 894
            + P EQ +S + W  NGD+ +KED  ++++  A K +    +++QDKV  NA+M DE S 
Sbjct: 767  NFPSEQINSCKQWQTNGDNKVKEDNYLDSECPAHKIETLGSTTQQDKVHINASMPDEVSR 826

Query: 895  ISKQASTNERLIGTNAAIAAAADQSNGRSNIENTSGLSVAHSRPGNHIVEGGLELRSSNE 954
             +KQ  + ERL+  N + ++  +Q +  +N++N SGL+   SRPGN    GGL       
Sbjct: 827  ANKQDHSIERLVNGNVSPSSGMEQISRITNVDNASGLAATPSRPGNISGAGGLG------ 880

Query: 955  ILPSSEGGECSRQNISTNGVMTEGAKILRYNAESVKQFKIEREEGELSPNGDFEEDNFAV 1014
             LPS EG + +R   STNG + E  K+ RY  E    FK EREEGELSPNGDFEED FAV
Sbjct: 881  -LPSLEGADSTRPVTSTNGAIIEDTKVHRYR-EDAGPFKSEREEGELSPNGDFEEDEFAV 938

Query: 1015 YGESGLEAVHKAKD 1028
            YG +GLEAVHK K+
Sbjct: 939  YGHAGLEAVHKGKN 952


>gi|357516665|ref|XP_003628621.1| Paired amphipathic helix protein Sin3 [Medicago truncatula]
 gi|355522643|gb|AET03097.1| Paired amphipathic helix protein Sin3 [Medicago truncatula]
          Length = 1484

 Score = 1263 bits (3267), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 683/1103 (61%), Positives = 820/1103 (74%), Gaps = 106/1103 (9%)

Query: 1    MKRSRDEVYMNSQIKRPMISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQ 60
            MKRSRD+ YM+SQ+KRP++SSRGEPSGQ QV+ GG     QKLTTNDAL+YLKAV+++FQ
Sbjct: 1    MKRSRDDGYMSSQLKRPVLSSRGEPSGQAQVMTGG-----QKLTTNDALSYLKAVREMFQ 55

Query: 61   DKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLED 120
            + +EKYD+FLEVMKDFKAQRIDTAGVI RVKELFKGH+DLILGFNTFLPKGY ITLP +D
Sbjct: 56   NDKEKYDEFLEVMKDFKAQRIDTAGVIERVKELFKGHKDLILGFNTFLPKGYAITLPSDD 115

Query: 121  EQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALF 180
            EQP  KKPVEFEEAINFV KIK RFQG+D VYK+FLDILNMYRKE K IT VYQEV ALF
Sbjct: 116  EQPLQKKPVEFEEAINFVGKIKNRFQGNDRVYKTFLDILNMYRKELKPITAVYQEVSALF 175

Query: 181  QDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQVHVDKKERAMASHA 240
            QDH DLLEEFTHFLPD+SGAA+ H+  S RN +LRDRSSAM T RQ+HVDK+E+    HA
Sbjct: 176  QDHGDLLEEFTHFLPDTSGAAAAHFA-SARNPLLRDRSSAMTTGRQMHVDKREKTTTLHA 234

Query: 241  DRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERRDDHRRERERDDRDFENDVNRDFSMQ 300
            DRDLSVD PDP+ DR ++++DK+QRRR  ++  R +  RRERERDDRD++ND N    ++
Sbjct: 235  DRDLSVDHPDPELDRGVMRTDKEQRRREREKDRREERDRRERERDDRDYDNDGN----LE 290

Query: 301  RFPHKRKSARKIED-STAEPLHQGGEGDENFGMHPVSSSYDDKNAMKSMFSQELSFCEKV 359
            R PHK+KS  +  D  TAEPLH   + DE   + P SS+ +DK+++KS+ S  L+F EKV
Sbjct: 291  RLPHKKKSVHRATDPGTAEPLH---DADEKLDLLPNSSTCEDKSSLKSLCSPVLAFLEKV 347

Query: 360  KDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLARCEKSEE 417
            K+KL+  DDYQEFL+CLH+Y++EIITR EL +LVGDLLG+Y D+M+GF+ F+ +CEK+E 
Sbjct: 348  KEKLKNPDDYQEFLKCLHIYSREIITRQELLALVGDLLGKYADIMEGFDDFVTQCEKNEG 407

Query: 418  LLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRLDKSVAFVNK 477
             LA VM+KKSLWNEG   K +KVE++DRDR R  DDGVK+RDRE RE+D   KS    NK
Sbjct: 408  FLAGVMNKKSLWNEGHGQKPLKVEEKDRDRGR--DDGVKERDRELRERD---KSTGISNK 462

Query: 478  DVG-PKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLN 536
            DV  PK+S+  SKDKY+ KPI ELDLSNCE+CTPSYRLLPKNY IP ASQ+TELGA+VLN
Sbjct: 463  DVSIPKVSL--SKDKYVGKPINELDLSNCEQCTPSYRLLPKNYPIPLASQKTELGAKVLN 520

Query: 537  DHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDR--FELDMLLESVNVTTKRVEELLEKI 594
            DHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDR  FELDMLLES+N T+K+VEE++EK+
Sbjct: 521  DHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRLLFELDMLLESINATSKKVEEIIEKV 580

Query: 595  NNNTIKTDGPIRVEDHFTALNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQE 654
            N++ I  D PIR+E+H +ALNLRCIERLYGDHGLDVM+VL+KNASLALPVILTRLKQKQE
Sbjct: 581  NDDIIPGDIPIRIEEHLSALNLRCIERLYGDHGLDVMEVLKKNASLALPVILTRLKQKQE 640

Query: 655  EWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKED 714
            EWARCR DFNKVWAEIY+KNYHKSLDHRSFYFKQQD+KSL  KAL  EIKEISE+KRK D
Sbjct: 641  EWARCREDFNKVWAEIYAKNYHKSLDHRSFYFKQQDTKSLSTKALLGEIKEISEQKRKVD 700

Query: 715  DVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLIKYSCGEMCTTEQLDKVMKIWTTFLE 774
            DVLLAIAAGNRR I+P+LEFEY DP+I EDLYQLIKYSCGE+C+TEQLDKVMKIWTTFLE
Sbjct: 701  DVLLAIAAGNRRPILPNLEFEYPDPEIQEDLYQLIKYSCGEVCSTEQLDKVMKIWTTFLE 760

Query: 775  PMLGVPSRPQGAEDTEDVVKAKSHTVKSRAASVGDSDGSPDGDAAAMTSKHSNPSRNGDE 834
            PMLGVPSR +  EDTED VKAK  + K+  AS+   D SP   A  M+ K++        
Sbjct: 761  PMLGVPSRLRVPEDTEDAVKAKKDSAKTGTASIAKGDSSPGVGATVMSPKNTF------- 813

Query: 835  SIPPEQSSSSRAWLPNGDHGIKEDVSVEADHNARKSDNFCDSSEQDKVQNNAAMADETSG 894
                EQS+S + W  NG  G+KED  +++D +  K++    S+ Q  V  NA++ DE S 
Sbjct: 814  ----EQSNSCKEWQTNGVGGVKEDDCLKSDRSVPKTETLGSSTLQGNVHINASIPDEVSR 869

Query: 895  ISKQASTNERLIGTNAAIAAAADQSNGRSNIENTSGLSVAHSRPGNHIVEGGLELRSSNE 954
            ++KQ  + E+L+  N ++++  +QSNGR+NI N SGL+   SRPG    EGGL+L SS  
Sbjct: 870  VNKQDHSIEQLVNANVSMSSRVEQSNGRTNINNASGLAATLSRPGYVYREGGLDLPSSEV 929

Query: 955  ILPSS----EGG---------------ECSRQNISTNGVMTEGAKIL------------- 982
             +       E G               E SR  ++ NG  T+G  +              
Sbjct: 930  CMHCQNCIFETGALRSWASGRRSFGEIEDSRTMLAPNGSGTQGGLLTCTALEGLTCNVEP 989

Query: 983  -------------RYNAESVK------------------------QFKIEREEGELSPNG 1005
                         ++ A+S +                         FK EREEGELSPNG
Sbjct: 990  FGCSQRTIHRDLGQWGADSTRPDTSTNGAIIEDTKAHRCHKESVGHFKSEREEGELSPNG 1049

Query: 1006 DFEEDNFAVYGESGLEAVHKAKD 1028
            DFEEDNFAVY  +GLEAVHK KD
Sbjct: 1050 DFEEDNFAVYANAGLEAVHKGKD 1072


>gi|449452080|ref|XP_004143788.1| PREDICTED: paired amphipathic helix protein Sin3-like 4-like [Cucumis
            sativus]
          Length = 1394

 Score = 1205 bits (3118), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 627/1035 (60%), Positives = 757/1035 (73%), Gaps = 70/1035 (6%)

Query: 1    MKRSRDEVYMNSQIKRPMISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQ 60
            MKRSR++V M SQ++RP+  SRGE + Q+Q+VGGG     QKLTTNDAL YLK VKDIF+
Sbjct: 1    MKRSREDVNMESQLQRPVFPSRGESTVQSQMVGGGS---LQKLTTNDALEYLKNVKDIFR 57

Query: 61   DKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLED 120
            DK+EKY+DFLEVMK+FKAQRIDT GVIARVK+LFKGHRDLILGFNTFLPKGY IT PLED
Sbjct: 58   DKKEKYEDFLEVMKEFKAQRIDTVGVIARVKQLFKGHRDLILGFNTFLPKGYAITCPLED 117

Query: 121  EQPP-PKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEAL 179
            E PP  KKPV+FEEAINFV KIKTRF+GD+HVYKSFL+ILN+YRKENKSI+EVY+EV AL
Sbjct: 118  ETPPQKKKPVQFEEAINFVGKIKTRFEGDNHVYKSFLEILNLYRKENKSISEVYREVSAL 177

Query: 180  FQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQVHVDKKERAMASH 239
             QDHPDLL EF HFLPD+S   S ++V S RNS+LRDR+S++P  +QV +D KERA   H
Sbjct: 178  LQDHPDLLREFVHFLPDASATTSNNHVSSMRNSVLRDRNSSIPPIQQVLIDTKERATTPH 237

Query: 240  ADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERRDD---HRRERERDDRDFENDVNRD 296
             D D+ V+ PD DH RV +K DK++ +  EKE++RRD+     + RE D +  E+D ++D
Sbjct: 238  TDHDIGVNHPDCDHARVTIKGDKEKCQHSEKEKDRRDNTDSMEQCREIDKKFIEHDSSKD 297

Query: 297  FSMQRFPHKRKSARKIEDSTAEPLHQGGEGDENFGMHPVSSSYDDKNAMKSMFSQELSFC 356
             SMQ F  KRKS+ ++ED+T+   H  GEG                          +SF 
Sbjct: 298  ISMQSFSQKRKSSVRVEDTTSVKWHLSGEG--------------------------MSFI 331

Query: 357  EKVKDKL--RDDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLARCEK 414
            EKV+ KL   D YQEF++CL ++ KEIITRSEL SLV DLLGRYPDLMD F  F+  C++
Sbjct: 332  EKVRLKLPNVDVYQEFVKCLDIFDKEIITRSELHSLVRDLLGRYPDLMDAFGEFMILCDR 391

Query: 415  SEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRLDKSVAF 474
            ++ LLAD+MSKKSLWNEG +P+  KVE++DR+RD ER+DG KDRD   RE+DRL+KSVAF
Sbjct: 392  TDGLLADIMSKKSLWNEGSLPRLAKVEEKDRNRDHEREDGFKDRDHGNRERDRLEKSVAF 451

Query: 475  VNKDVGP-KMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAE 533
             + DVG  KMS++SSKDKY  KPI ELDLSNCERCTPSYRLLPKNY IP ASQRTE+G +
Sbjct: 452  GHNDVGSHKMSLFSSKDKYFGKPINELDLSNCERCTPSYRLLPKNYPIPFASQRTEIGDQ 511

Query: 534  VLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEK 593
            VLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVT+KRVE+LLEK
Sbjct: 512  VLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTSKRVEDLLEK 571

Query: 594  INNNTIKTDGPIRVEDHFTALNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQ 653
            IN     +D P+ +EDH TALNLRCIERLYGDHGLDVMDVLRKNA L+LPVILTRLKQKQ
Sbjct: 572  IN----LSDSPVHIEDHLTALNLRCIERLYGDHGLDVMDVLRKNAPLSLPVILTRLKQKQ 627

Query: 654  EEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKE 713
            EEWARCRSDFNKVWAEIY KNY KSLDHRSFYFKQQD+KSL  KAL +EIKEI+EKK KE
Sbjct: 628  EEWARCRSDFNKVWAEIYFKNYQKSLDHRSFYFKQQDTKSLSTKALLSEIKEINEKKHKE 687

Query: 714  DDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLIKYSCGEMCTTEQLDKVMKIWTTFL 773
            +DVLL I A N+R I+P+LEF+Y D DIHEDLY LIKYSC E+C+T+Q DK MKIWTTFL
Sbjct: 688  EDVLLTITAENKRPIIPNLEFDYPDQDIHEDLYHLIKYSCRELCSTDQSDKAMKIWTTFL 747

Query: 774  EPMLGVPSRPQGAEDTEDVVKAKSHTVKSRAASVGDSDGSPDGDAAAMTSKHSNPSRNGD 833
            EPMLG+ SRP  +E ++++++  +  V  R  ++G    S         SK  +P R   
Sbjct: 748  EPMLGIASRPLSSEVSKEIIRENNFAV--RGTAIGMVGVSSSHTVGGDESKLRDPPRIEV 805

Query: 834  ESIPPEQSSSSRAWLPNGDHGIKEDVSVEADHNARKSDNFCDSSEQDKVQNNAAMADETS 893
              + P+QSS  R W  NGD  I+E+    + H A + D+  DS  + +   N        
Sbjct: 806  GGVQPKQSSPCRVWPMNGDSCIEEN----SFHKANRVDSKVDSLRKLQFNEN-------- 853

Query: 894  GISKQASTNERLIGTNAAIAAAADQSNGRSNIENTSGLSVAHSRPGNHIVEGGLELRSSN 953
                Q  +NERL+ +N  +++  +Q  G+  IE  SGL    SR  N  V+ GLE     
Sbjct: 854  ----QDDSNERLVKSNVLVSSVLEQGKGKVTIETASGLRSTPSRTWNGGVDKGLE----- 904

Query: 954  EILPSSEGGECSRQNISTNGVMTEGAKILRYNAESVKQFKIEREEGELSPNGDFEEDNFA 1013
              L SS+GG CS + + +NGVM EG+    +N +     KIEREEGELSP G+  EDNF+
Sbjct: 905  --LASSQGG-CSSRPLLSNGVMAEGSNAPSFNEKCDGHSKIEREEGELSPTGEL-EDNFS 960

Query: 1014 VYGESGLEAVHKAKD 1028
             Y E  L+   KAKD
Sbjct: 961  NYQEGSLD---KAKD 972


>gi|359488765|ref|XP_002281791.2| PREDICTED: paired amphipathic helix protein Sin3-like 2-like [Vitis
            vinifera]
          Length = 1395

 Score = 1159 bits (2998), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 616/1046 (58%), Positives = 761/1046 (72%), Gaps = 79/1046 (7%)

Query: 1    MKRSRDEVYMNSQIKRPMISSRGEPSGQTQV----------VGGGGGGGAQKLTTNDALA 50
            MKR RD+ Y+ SQ KRP  SSRG+  GQ Q+           GGGGGG   KLTT DAL 
Sbjct: 1    MKRLRDDGYVGSQFKRPYGSSRGDSYGQPQIPGGGGGGGGGGGGGGGGSMPKLTTTDALT 60

Query: 51   YLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPK 110
            YLK VK++FQD+REKYD FLEVMKDFKAQR DTAGVIARVKELFKGH +LI GFNTFLPK
Sbjct: 61   YLKEVKEMFQDQREKYDTFLEVMKDFKAQRTDTAGVIARVKELFKGHNNLIFGFNTFLPK 120

Query: 111  GYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSIT 170
            GYEITLP EDE PPPKK VEFEEAINFVNKIK RFQ DDHVYKSFLDILNMYR+ENK I 
Sbjct: 121  GYEITLP-EDE-PPPKKTVEFEEAINFVNKIKKRFQNDDHVYKSFLDILNMYRRENKDIH 178

Query: 171  EVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILR--DRSSAMPTARQVH 228
            EVY+EV  LF DH DLLEEF  FLP+SS   S  ++P GRN+I R  +R+S+ PT RQ+H
Sbjct: 179  EVYREVAVLFSDHKDLLEEFVRFLPESSAMHSAQHLPYGRNTIQRYDERNSSTPTLRQMH 238

Query: 229  VDK----KERAMASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERRDDHRRERER 284
            VDK    +++ + SHADRD S+ R D D D+ ++K  K+Q+RR EKE   R    R+++ 
Sbjct: 239  VDKQRCWRDKIIPSHADRDSSIYRTDLDDDKAMMKIHKEQKRRTEKENRDR--RNRDQDD 296

Query: 285  DDRDFENDVNRDFSMQRFPHKRKSARKIEDSTAEPLHQGGEGDENFGMHPVSSSYDDKNA 344
             +   EN  NRDF++QR P KRKS+RK+E                FG +P+ +SYDDK+A
Sbjct: 297  REPSHEN--NRDFNLQRLPEKRKSSRKVE---------------GFGANPILASYDDKDA 339

Query: 345  MKSMFSQELSFCEKVKDKL--RDDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLM 402
            +KSM +QE  FCEKVK+KL   DDYQ FL+CLH+Y+KEII+RSELQ+LV DLLG+YPDLM
Sbjct: 340  LKSMCNQEFIFCEKVKEKLCSMDDYQAFLKCLHIYSKEIISRSELQTLVADLLGKYPDLM 399

Query: 403  DGFNGFLARCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREA 462
            DGFN FL RCE  +  LA VM+KKSLW+EG + +S++ E++D+++ RE + G K++DR  
Sbjct: 400  DGFNEFLERCENIDGFLAGVMNKKSLWDEGHLSRSMRAEEKDKEQKREME-GAKEKDR-- 456

Query: 463  REKDRLDKSVAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIP 522
                                      ++KY+ K IQELDLSNCERCTPSYRLLP++Y I 
Sbjct: 457  -------------------------CREKYMGKSIQELDLSNCERCTPSYRLLPEDYPIA 491

Query: 523  SASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNV 582
             A +R+ELGA+VLND WVSVTSGSEDYSFKHMR+NQYEESLFRCEDDRFELDMLLESV  
Sbjct: 492  IAKERSELGAQVLNDQWVSVTSGSEDYSFKHMRRNQYEESLFRCEDDRFELDMLLESVTS 551

Query: 583  TTKRVEELLEKINNNTIKTDGPIRVEDHFTALNLRCIERLYGDHGLDVMDVLRKNASLAL 642
              K  E+LL  I++N++ +  PI++E H T LNLRCI+RLYGDH LD +D LRKN SLAL
Sbjct: 552  AAKHAEDLLNSISDNSVGS--PIQIEGHLTVLNLRCIDRLYGDHALDALDTLRKNTSLAL 609

Query: 643  PVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAE 702
            PVIL+RLKQK EEW+RCRSDFNKVWAEIY+KN++KSLDHRSFYFKQQDSK+L  K+L AE
Sbjct: 610  PVILSRLKQKHEEWSRCRSDFNKVWAEIYAKNHYKSLDHRSFYFKQQDSKNLSTKSLVAE 669

Query: 703  IKEISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLIKYSCGEMCTT-EQ 761
            IKE+ E+K+ EDD+LLAIAAGNRR + P+LEFEYSD +IH+DLY+L++YSC E+CTT EQ
Sbjct: 670  IKELKEEKQNEDDMLLAIAAGNRRFVNPNLEFEYSDVNIHDDLYKLVQYSCEEVCTTNEQ 729

Query: 762  LDKVMKIWTTFLEPMLGVPSRPQGAEDTEDVVKAKSHTVKSRAASVGDSDGSPDGDAAAM 821
            L+KVM++WTTFLEPMLGVPSR    E  EDV KA+   VKS A+S G+ DGSP  +AA M
Sbjct: 730  LNKVMRLWTTFLEPMLGVPSRVDREEGAEDVAKARHGAVKSSASSTGERDGSPGAEAAVM 789

Query: 822  TSKHSNPSRNGDESIPPEQSSSSRAWLPNGDHGIKEDVSVEADHNARKSDNFCDSSEQDK 881
             SK  N + NGDE+  PE ++S RA L NGD   K+D   ++ H ++      D    +K
Sbjct: 790  NSKQPNLASNGDENAIPESANSCRASLVNGDSLPKDD--HDSSHISKD-----DPPRLEK 842

Query: 882  VQNNAAMADETSGISKQASTNERLIGTNAAIAAAADQSNGRSNIENTSGLSVAHSRPGNH 941
               N A  ++ SG + Q  + E+LI +NA++A  A+ + GR+++E  SG     SRPGN 
Sbjct: 843  ELKNVAATEKISGFNIQVGSGEQLIDSNASLATGAENNLGRAHMEVMSGHVSTPSRPGNV 902

Query: 942  IVEGGLELRSSNEILPSSEGGECSRQNISTNGVMTEGAKILRYNAESVKQFKIEREEGEL 1001
             +E   E +   +   SSEGG+  R  IS NGV++EG K+ +Y+AESV   KIE+EEGEL
Sbjct: 903  AIEEAHEHKPGFD--ASSEGGDVMRTVISANGVLSEGTKLNKYHAESVGPSKIEKEEGEL 960

Query: 1002 SPNGDFEEDNFAVYGESGLEAVHKAK 1027
            SPNGDFEEDNF VYG++  +AV  AK
Sbjct: 961  SPNGDFEEDNFVVYGDASTQAVPLAK 986


>gi|296087759|emb|CBI35015.3| unnamed protein product [Vitis vinifera]
          Length = 1359

 Score = 1154 bits (2985), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 612/1037 (59%), Positives = 756/1037 (72%), Gaps = 79/1037 (7%)

Query: 1    MKRSRDEVYMNSQIKRPMISSRGEPSGQTQV----------VGGGGGGGAQKLTTNDALA 50
            MKR RD+ Y+ SQ KRP  SSRG+  GQ Q+           GGGGGG   KLTT DAL 
Sbjct: 1    MKRLRDDGYVGSQFKRPYGSSRGDSYGQPQIPGGGGGGGGGGGGGGGGSMPKLTTTDALT 60

Query: 51   YLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPK 110
            YLK VK++FQD+REKYD FLEVMKDFKAQR DTAGVIARVKELFKGH +LI GFNTFLPK
Sbjct: 61   YLKEVKEMFQDQREKYDTFLEVMKDFKAQRTDTAGVIARVKELFKGHNNLIFGFNTFLPK 120

Query: 111  GYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSIT 170
            GYEITLP EDE PPPKK VEFEEAINFVNKIK RFQ DDHVYKSFLDILNMYR+ENK I 
Sbjct: 121  GYEITLP-EDE-PPPKKTVEFEEAINFVNKIKKRFQNDDHVYKSFLDILNMYRRENKDIH 178

Query: 171  EVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILR--DRSSAMPTARQVH 228
            EVY+EV  LF DH DLLEEF  FLP+SS   S  ++P GRN+I R  +R+S+ PT RQ+H
Sbjct: 179  EVYREVAVLFSDHKDLLEEFVRFLPESSAMHSAQHLPYGRNTIQRYDERNSSTPTLRQMH 238

Query: 229  VDK----KERAMASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERRDDHRRERER 284
            VDK    +++ + SHADRD S+ R D D D+ ++K  K+Q+RR EKE   R    R+++ 
Sbjct: 239  VDKQRCWRDKIIPSHADRDSSIYRTDLDDDKAMMKIHKEQKRRTEKENRDR--RNRDQDD 296

Query: 285  DDRDFENDVNRDFSMQRFPHKRKSARKIEDSTAEPLHQGGEGDENFGMHPVSSSYDDKNA 344
             +   EN  NRDF++QR P KRKS+RK+E                FG +P+ +SYDDK+A
Sbjct: 297  REPSHEN--NRDFNLQRLPEKRKSSRKVE---------------GFGANPILASYDDKDA 339

Query: 345  MKSMFSQELSFCEKVKDKL--RDDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLM 402
            +KSM +QE  FCEKVK+KL   DDYQ FL+CLH+Y+KEII+RSELQ+LV DLLG+YPDLM
Sbjct: 340  LKSMCNQEFIFCEKVKEKLCSMDDYQAFLKCLHIYSKEIISRSELQTLVADLLGKYPDLM 399

Query: 403  DGFNGFLARCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREA 462
            DGFN FL RCE  +  LA VM+KKSLW+EG + +S++ E++D+++ RE + G K++DR  
Sbjct: 400  DGFNEFLERCENIDGFLAGVMNKKSLWDEGHLSRSMRAEEKDKEQKREME-GAKEKDR-- 456

Query: 463  REKDRLDKSVAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIP 522
                                      ++KY+ K IQELDLSNCERCTPSYRLLP++Y I 
Sbjct: 457  -------------------------CREKYMGKSIQELDLSNCERCTPSYRLLPEDYPIA 491

Query: 523  SASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNV 582
             A +R+ELGA+VLND WVSVTSGSEDYSFKHMR+NQYEESLFRCEDDRFELDMLLESV  
Sbjct: 492  IAKERSELGAQVLNDQWVSVTSGSEDYSFKHMRRNQYEESLFRCEDDRFELDMLLESVTS 551

Query: 583  TTKRVEELLEKINNNTIKTDGPIRVEDHFTALNLRCIERLYGDHGLDVMDVLRKNASLAL 642
              K  E+LL  I++N++ +  PI++E H T LNLRCI+RLYGDH LD +D LRKN SLAL
Sbjct: 552  AAKHAEDLLNSISDNSVGS--PIQIEGHLTVLNLRCIDRLYGDHALDALDTLRKNTSLAL 609

Query: 643  PVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAE 702
            PVIL+RLKQK EEW+RCRSDFNKVWAEIY+KN++KSLDHRSFYFKQQDSK+L  K+L AE
Sbjct: 610  PVILSRLKQKHEEWSRCRSDFNKVWAEIYAKNHYKSLDHRSFYFKQQDSKNLSTKSLVAE 669

Query: 703  IKEISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLIKYSCGEMCTT-EQ 761
            IKE+ E+K+ EDD+LLAIAAGNRR + P+LEFEYSD +IH+DLY+L++YSC E+CTT EQ
Sbjct: 670  IKELKEEKQNEDDMLLAIAAGNRRFVNPNLEFEYSDVNIHDDLYKLVQYSCEEVCTTNEQ 729

Query: 762  LDKVMKIWTTFLEPMLGVPSRPQGAEDTEDVVKAKSHTVKSRAASVGDSDGSPDGDAAAM 821
            L+KVM++WTTFLEPMLGVPSR    E  EDV KA+   VKS A+S G+ DGSP  +AA M
Sbjct: 730  LNKVMRLWTTFLEPMLGVPSRVDREEGAEDVAKARHGAVKSSASSTGERDGSPGAEAAVM 789

Query: 822  TSKHSNPSRNGDESIPPEQSSSSRAWLPNGDHGIKEDVSVEADHNARKSDNFCDSSEQDK 881
             SK  N + NGDE+  PE ++S RA L NGD   K+D   ++ H ++      D    +K
Sbjct: 790  NSKQPNLASNGDENAIPESANSCRASLVNGDSLPKDD--HDSSHISKD-----DPPRLEK 842

Query: 882  VQNNAAMADETSGISKQASTNERLIGTNAAIAAAADQSNGRSNIENTSGLSVAHSRPGNH 941
               N A  ++ SG + Q  + E+LI +NA++A  A+ + GR+++E  SG     SRPGN 
Sbjct: 843  ELKNVAATEKISGFNIQVGSGEQLIDSNASLATGAENNLGRAHMEVMSGHVSTPSRPGNV 902

Query: 942  IVEGGLELRSSNEILPSSEGGECSRQNISTNGVMTEGAKILRYNAESVKQFKIEREEGEL 1001
             +E   E +   +   SSEGG+  R  IS NGV++EG K+ +Y+AESV   KIE+EEGEL
Sbjct: 903  AIEEAHEHKPGFD--ASSEGGDVMRTVISANGVLSEGTKLNKYHAESVGPSKIEKEEGEL 960

Query: 1002 SPNGDFEEDNFAVYGES 1018
            SPNGDFEEDNF VYG++
Sbjct: 961  SPNGDFEEDNFVVYGDA 977


>gi|297850900|ref|XP_002893331.1| hypothetical protein ARALYDRAFT_472680 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297339173|gb|EFH69590.1| hypothetical protein ARALYDRAFT_472680 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1328

 Score = 1095 bits (2831), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 591/995 (59%), Positives = 716/995 (71%), Gaps = 77/995 (7%)

Query: 36   GGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFK 95
            GGG AQKLTTNDALAYLKAVKD FQD+REKYD+FLEVMK+FK+QR+DTAGVI RVKELFK
Sbjct: 3    GGGSAQKLTTNDALAYLKAVKDKFQDQREKYDEFLEVMKNFKSQRVDTAGVITRVKELFK 62

Query: 96   GHRDLILGFNTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSF 155
            GH++LILGFNTFLPKG+EITL  ED QPP KK VEFEEAI+FVNKIKTRFQGDD VYKSF
Sbjct: 63   GHQELILGFNTFLPKGFEITLQPEDGQPPLKKRVEFEEAISFVNKIKTRFQGDDRVYKSF 122

Query: 156  LDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILR 215
            LDILNMYRK++KSITEVYQEV  LF+DH DLL EFTHFLPD+S   SIH V +      R
Sbjct: 123  LDILNMYRKDSKSITEVYQEVAVLFRDHTDLLVEFTHFLPDTSATPSIHSVKTSA----R 178

Query: 216  DRSSAMPTARQVHVDKKERAMASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERR 275
            DR  ++P       DKK+R +  H           PDHD      D+++  + E +   R
Sbjct: 179  DRGMSLP-------DKKDRIITPH-----------PDHDYGTEHMDRERPMKKENKEHMR 220

Query: 276  DDHRRERERDDRDFENDVNRDFSMQRFPHKRKSARKIEDSTAEPLHQGGEGDENFGMHPV 335
             ++    +RD RD E D  +    ++F +KR+      D +AE  +Q  EG++ FG  P 
Sbjct: 221  GNNNENEQRDARDLEPDSKK----EQFLNKRQKIHIRGDDSAEISNQVREGNKFFGAVPS 276

Query: 336  SSSYDDKNAMKSMFSQELSFCEKVKDKLR-DDYQEFLRCLHLYTKEIITRSELQSLVGDL 394
            SS+YD+K AMKS +SQ+L+  ++VK KL   +YQEFLRCL+L++KEII+R ELQSLVG+L
Sbjct: 277  SSTYDEKGAMKS-YSQDLAIVDRVKGKLNASEYQEFLRCLNLFSKEIISRPELQSLVGNL 335

Query: 395  LGRYPDLMDGFNGFLARCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDG 454
            +G YPDLMD F  FL +CEK+E LL+ +++KKSLW+EG+ P+     D DRD++ +RDDG
Sbjct: 336  IGVYPDLMDSFIEFLVQCEKTEGLLSGILTKKSLWSEGKYPQPSL--DNDRDQEHKRDDG 393

Query: 455  VKDRDREAREKDRLDKSVAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRL 514
             +DRD +   K+RL+K+ A +                  AKPI ELDLSNCE+CTPSYRL
Sbjct: 394  FRDRDHD---KERLEKAAANLK----------------WAKPISELDLSNCEQCTPSYRL 434

Query: 515  LPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELD 574
            LPKNY I  ASQ+TELG  VLNDHWVSVTSGSEDYSF HMRKNQYEESLF+CEDDRFELD
Sbjct: 435  LPKNYPISIASQKTELGKLVLNDHWVSVTSGSEDYSFSHMRKNQYEESLFKCEDDRFELD 494

Query: 575  MLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFTALNLRCIERLYGDHGLDVMDVL 634
            MLLESVN TTK VEELL KIN+N +KT+ PIRVEDH TALNLRCIERLYGDHGLDVMDVL
Sbjct: 495  MLLESVNSTTKHVEELLAKINSNELKTNSPIRVEDHLTALNLRCIERLYGDHGLDVMDVL 554

Query: 635  RKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSL 694
            +KN SLALPVILTRLKQKQEEWARCRSDF+KVWA+IY+KNY+KSLDHRSFYFKQQDSKSL
Sbjct: 555  KKNVSLALPVILTRLKQKQEEWARCRSDFDKVWADIYAKNYYKSLDHRSFYFKQQDSKSL 614

Query: 695  GAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLIKYSCG 754
              KAL AEIKEI+EKKR EDD LLA AAGNR SI P+LEF+Y DPD+HEDLYQLIKYSC 
Sbjct: 615  SMKALLAEIKEITEKKR-EDDSLLAFAAGNRLSISPNLEFDYPDPDLHEDLYQLIKYSCA 673

Query: 755  EMCTTEQLDKVMKIWTTFLEPMLGVPSRPQGAEDTEDVVKAKSHTVKSRAASVGDSDGSP 814
            EMC+TEQLDKVMKIWTTF+E + GVPSRPQGAED EDVVK+ +  VKS + S G+S+GSP
Sbjct: 674  EMCSTEQLDKVMKIWTTFVEQIFGVPSRPQGAEDQEDVVKSINQNVKSGSLSAGESEGSP 733

Query: 815  DGDAAAMTSKHSNPSRNGDESIPPEQSSSSRAWLPNGDHGIKEDVSVEADHNARKSDNFC 874
               A+   S+ SN S+  +E     Q S+S          ++   +V      R SD  C
Sbjct: 734  HNYASVADSRRSNTSQKANEHNQLGQPSNS----------VRNGAAV------RTSDALC 777

Query: 875  DSSEQDKVQNNAAMADETSGISKQASTNERLIGTNA-AIAAAADQSNGRSNIENTSGLSV 933
            ++++ +K+  N   + E    SKQA + E +  + A A+    DQSNG S+I + +G + 
Sbjct: 778  ETAQHEKMLKNVVTSGERPE-SKQAVSIEHVQDSTALAVDGLLDQSNGGSSIVHMTGHNN 836

Query: 934  AHSRPGNHIVEGGLELRSSNEILPSSEGGECSRQNISTNGVMTEGAKILRYNAESVKQFK 993
             + +P     E  LEL+  +   P  E G    + + +NG+  E    +    E V   K
Sbjct: 837  NNLKPVTCGTE--LELKMDDGNGPKLEVG---NKRLLSNGISVE----ITSTQELVGNSK 887

Query: 994  IEREEGELSPNGDFEEDNFAVYGESGLEAVHKAKD 1028
            +EREEGELSPNGDFEEDNFAVY ++GLE   KA D
Sbjct: 888  VEREEGELSPNGDFEEDNFAVYEKTGLETTSKAND 922


>gi|334183798|ref|NP_177163.3| paired amphipathic helix protein Sin3-like 4 [Arabidopsis thaliana]
 gi|374095485|sp|O04539.3|SNL4_ARATH RecName: Full=Paired amphipathic helix protein Sin3-like 4
 gi|332196891|gb|AEE35012.1| paired amphipathic helix protein Sin3-like 4 [Arabidopsis thaliana]
          Length = 1326

 Score = 1073 bits (2774), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 584/1000 (58%), Positives = 718/1000 (71%), Gaps = 78/1000 (7%)

Query: 36   GGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFK 95
            GG  AQKLTTNDALAYLKAVKD FQDKR+KYD+FLEVMKDFKAQR+DT GVI RVKELFK
Sbjct: 3    GGSSAQKLTTNDALAYLKAVKDKFQDKRDKYDEFLEVMKDFKAQRVDTTGVILRVKELFK 62

Query: 96   GHRDLILGFNTFLPKGYEITLPLEDEQPP-PKKPVEFEEAINFVNKIKTRFQGDDHVYKS 154
            G+R+LILGFNTFLPKG+EITL  ED+QP  PKKPVEFEEAI+FVNKIKTRFQGDD VYKS
Sbjct: 63   GNRELILGFNTFLPKGFEITLRPEDDQPAAPKKPVEFEEAISFVNKIKTRFQGDDRVYKS 122

Query: 155  FLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIH---YVPSGRN 211
            FLDILNMYRKENKSITEVY EV  LF+DH DLL EFTHFLPD+S  AS +    VP    
Sbjct: 123  FLDILNMYRKENKSITEVYHEVAILFRDHHDLLGEFTHFLPDTSATASTNDSVKVP---- 178

Query: 212  SILRDRS-SAMPTARQVHVDKKERAMASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEK 270
              +RDR   ++PT RQ+ +DKK+R + SH +R L  +  D DH+R LLK  K++ RR +K
Sbjct: 179  --VRDRGIKSLPTMRQIDLDKKDRIITSHPNRALKTENMDVDHERSLLKDSKEEVRRIDK 236

Query: 271  ERERRDDHRRERERDDRDFENDVNRDFSMQRFPHKRKSARKIEDSTAEPLHQGGEGDENF 330
            + +  DD  R   +D R  ++D +++     F  K+K  RK +D +AE   Q  EGD+  
Sbjct: 237  KNDFMDDRDR---KDYRGLDHDSHKE---HFFNSKKKLIRK-DDDSAEMSDQAREGDKFS 289

Query: 331  GMHPVSSSYDDKNAMKSMFSQELSFCEKVKDKL-RDDYQEFLRCLHLYTKEIITRSELQS 389
            G  P SS+YD+K       SQEL+F ++VK KL   D QEFLRCL+LY+KEII++ ELQS
Sbjct: 290  GAIPSSSTYDEKG-----HSQELAFVDRVKAKLDTADNQEFLRCLNLYSKEIISQPELQS 344

Query: 390  LVGDLLGRYPDLMDGFNGFLARCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDR 449
            LV DL+G YPDLMD F  FLA+C+K++ LL+ ++SKKSLW+EG+ P+  K  D+D DR+R
Sbjct: 345  LVSDLIGVYPDLMDAFKVFLAQCDKNDGLLSGIVSKKSLWSEGKCPQPTKSLDKDTDRER 404

Query: 450  ERDDGVKDRDREAREKDRLDKSVAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCT 509
            E+ +  ++RDRE   K+RL+K  A                 +  AKPI ELDLSNCE+CT
Sbjct: 405  EKIERYRERDRE---KERLEKVAA----------------SQKWAKPISELDLSNCEQCT 445

Query: 510  PSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDD 569
            PSYR LPKNY IP ASQ+ E+G++VLNDHWVSVTSGSEDYSFKHMRKNQYEESLF+CEDD
Sbjct: 446  PSYRRLPKNYPIPIASQKMEIGSQVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFKCEDD 505

Query: 570  RFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFTALNLRCIERLYGDHGLD 629
            RFELDMLLESV   T RVEELL KIN+N +KTD PI +EDH TALNLRCIERLY DHGLD
Sbjct: 506  RFELDMLLESVISATNRVEELLAKINSNELKTDTPICIEDHLTALNLRCIERLYSDHGLD 565

Query: 630  VMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQ 689
            V+D+L+KNA LALPVILTRLKQKQEEWARCR++FNKVWA+IY+KNYH+SLDHRSFYFKQQ
Sbjct: 566  VLDLLKKNAYLALPVILTRLKQKQEEWARCRTEFNKVWADIYTKNYHRSLDHRSFYFKQQ 625

Query: 690  DSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLI 749
            DSK+L  KAL AEIKEISEKKR EDD LLA+AAGNRR+I  ++ F+Y DPD+HEDLYQLI
Sbjct: 626  DSKNLSTKALLAEIKEISEKKRGEDDALLALAAGNRRTISSNMSFDYPDPDLHEDLYQLI 685

Query: 750  KYSCGEMCTTEQLDKVMKIWTTFLEPMLGVPSRPQGAEDTEDVVKAKSHTVKSRAASVGD 809
            KYSCGEMC+TEQLDKVMK+WT FLEP+ GVPSRPQGAED ED VK+ +H  + +  +V  
Sbjct: 686  KYSCGEMCSTEQLDKVMKVWTEFLEPIFGVPSRPQGAEDREDAVKSTNHDREDQEDAV-- 743

Query: 810  SDGSPDGDAAAMTSKHSNPSRNGDESIPPEQSSSSRAWLPNGDHGIKEDVSVEADHNARK 869
               SP   A+   S  SN  R  +ES    Q+S            + +DV+     +A  
Sbjct: 744  ---SPQNGASIANSMRSNGPRKVNESNQVRQASE-----------LDKDVTSSKTSDALL 789

Query: 870  SDNFCDSSEQDKVQNNAAMADETSGISKQASTNERLIGTNA-AIAAAADQSNGRSNIENT 928
            S   CD+++ DK+  N    DE +  +KQA + ER   +NA  +     Q NG+ +  + 
Sbjct: 790  S---CDNTQNDKMPKNLTTPDERAE-TKQAVSIERAHNSNALPLDGLLPQRNGKISSLSV 845

Query: 929  SGLSVAHSRPGNHIVEGGLELRSSNEILPSSEGGECSRQNISTNGVMTEGAKILRYNAES 988
            +GLS ++ +P   +  G  EL+      P+   G   R  I  N V+  G     +  E+
Sbjct: 846  AGLSNSNPKPA--LTSGTEELK------PNYVNG--PRVEIGDNPVIPNGTVAEWFAGEA 895

Query: 989  VKQFKIEREEGELSPNGDFEEDNFAVYGESGLEAVHKAKD 1028
                K+EREEGELSP GDFEEDN+AV+GE+ +EA+ K+K+
Sbjct: 896  ----KVEREEGELSPTGDFEEDNYAVHGENDMEALSKSKE 931


>gi|102139907|gb|ABF70056.1| paired amphipathic helix repeat-containing protein / transcription
            regulator-related [Musa acuminata]
          Length = 1408

 Score = 1070 bits (2767), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 577/1025 (56%), Positives = 720/1025 (70%), Gaps = 80/1025 (7%)

Query: 34   GGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKEL 93
                G   KLTTNDALAYLKAVKDIF DKREKYD+FLEVMKDFK+QRIDT GVI RVKEL
Sbjct: 4    AAAAGSTSKLTTNDALAYLKAVKDIFHDKREKYDEFLEVMKDFKSQRIDTNGVIMRVKEL 63

Query: 94   FKGHRDLILGFNTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYK 153
            FKGHRDLILGFNTFLPKGYEI LP E      KKPVEFEEAI FVNKIK+RFQ D+HVYK
Sbjct: 64   FKGHRDLILGFNTFLPKGYEIKLPEE------KKPVEFEEAIVFVNKIKSRFQNDEHVYK 117

Query: 154  SFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSI 213
            SFLDILNMYR+ENK I EVY+EV ALFQ+H DLLEEFTHFLPD+S   + H     R+  
Sbjct: 118  SFLDILNMYRRENKPIREVYEEVAALFQNHQDLLEEFTHFLPDASATYAPHLGYPDRSFA 177

Query: 214  LRD-RSSAMPTARQVHVDKKERAMASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKER 272
             RD RS  MP AR+   DK+E+A  SHA+RDLS+DR D +HD         QRR  EKE+
Sbjct: 178  HRDERSPVMPLARE---DKREKAYTSHANRDLSIDRLDMEHD--------SQRRHAEKEK 226

Query: 273  ERRDDH-RRERERDDRDFEND---VNRDFSMQRFPHKRKSARKIEDSTAEPLHQGGEGDE 328
            +R++D  +R  ERD+++ E+D   ++ +   ++ P     +R+++D TAEP+HQGG    
Sbjct: 227  DRKEDRDKRYHERDEKELEHDSGDLDNEQCRRKLP-----SRRVDDPTAEPMHQGG---- 277

Query: 329  NFGMHPVSSS-YDDKNAMKSMFSQELSFCEKVKDKL-RDDYQEFLRCLHLYTKEIITRSE 386
            N  M+ +S+S +DDKNA+KS++++E +FCEKVK+KL RD YQEFL+CLH+Y+KEII R+E
Sbjct: 278  NIAMNSISASQFDDKNALKSVYTREFNFCEKVKEKLHRDTYQEFLQCLHIYSKEIINRTE 337

Query: 387  LQSLV----------------GDLLGRYPDLMDGFNGFLARCEKSEELLADVMSKKSLWN 430
            L +LV                 D+LG+YPDLM+GFN FLA CE    +         L N
Sbjct: 338  LTNLVRFLILEASITMVTVLVSDILGKYPDLMEGFNEFLAHCENIGGIPV------ILCN 391

Query: 431  EGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRLDKSVAFVNKDVGPKMSMYSSKD 490
            EG +   +K+EDRDR+RD E    + DR+++   +   ++     +K    K  + S+K+
Sbjct: 392  EGHMAMPIKIEDRDRERDHE----INDREKDLERERNFERERG--DKGAAHKAPLISNKE 445

Query: 491  KY-LAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDY 549
            KY L KPI ELDLSNC+RC+PSY LLPKNY IP ASQRTELG  +LND WVSVTSGSEDY
Sbjct: 446  KYNLWKPISELDLSNCQRCSPSYCLLPKNYSIPPASQRTELGESILNDVWVSVTSGSEDY 505

Query: 550  SFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVED 609
            SFKHMRKNQYEESLFRCEDDRFELDMLLESVN TTK+VEELLE + +  +K++ PI +ED
Sbjct: 506  SFKHMRKNQYEESLFRCEDDRFELDMLLESVNATTKQVEELLEMMQD-PVKSENPIHIED 564

Query: 610  HFTALNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAE 669
              T+LNLRCIERLYGDHGLDVMDVLRKN+SL+LPVILTRLKQKQEEW RCRSDFNKVWAE
Sbjct: 565  TLTSLNLRCIERLYGDHGLDVMDVLRKNSSLSLPVILTRLKQKQEEWTRCRSDFNKVWAE 624

Query: 670  IYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIV 729
            IY+KNYHKSLDHRSFYFKQQD+KSL  KAL AEIKEI++K +KEDD++L+IAA NR+ IV
Sbjct: 625  IYAKNYHKSLDHRSFYFKQQDAKSLSTKALLAEIKEINDKMKKEDDIVLSIAAKNRQPIV 684

Query: 730  PHLEFEYSDPDIHEDLYQLIKYSCGEMCTT-EQLDKVMKIWTTFLEPMLGVPSRPQGAED 788
            P++EFEY D DIHEDLY++I+YSCGE+CT+ +Q+DKV+K WTTFLEP++G   + +GAE 
Sbjct: 685  PNMEFEYIDLDIHEDLYRIIRYSCGEVCTSLDQVDKVIKFWTTFLEPLMGFQPQNRGAEG 744

Query: 789  TEDVVKAKSHTVKSRAASVGDSDGSPDGDAAAMTSKHSNPSRNGDESIPPEQSSSSRAWL 848
              D VK  SH+ KS  A +  S+GSPD D    T +      NG E+I  EQ +S R  L
Sbjct: 745  MRD-VKPNSHSGKSSIAGLVKSNGSPDADGTGATKQ-----SNGGENIQSEQVASCRTKL 798

Query: 849  PNGDHGIKEDVSVEADHNARKSDNFCDSSEQDKVQNNAAMADETSGISKQASTNERLIGT 908
             NGD  +  +   +      +  N C++  Q +VQ +A  ADE+SGI+ Q  + E L   
Sbjct: 799  ANGDTTVSGNCFHDVGRATHRVGNLCNNPLQRRVQGSAPKADESSGITVQNVSAEHL-SD 857

Query: 909  NAAIAAAADQSNGRSNIENTSGLSVAHSRPGNHIVEGGLELRSSNEILPSSEGGECSRQN 968
            N +    A++S+ R+N+E  SG+  A  +  +   E  +E R+  E+      G+  R  
Sbjct: 858  NTSFVGRAEESHSRTNLETVSGVGGASLQTSHCGTEMLVEPRACLEV------GQTGRSI 911

Query: 969  ISTN-GVMTEGAKILRYNAES--VKQFKIEREEGELSPNGDFEEDNFAVYGESGLEAVHK 1025
            IS N G   E  K  R N  S  +   K+EREEGELSPNGD EEDNFA + ++ +    K
Sbjct: 912  ISVNCGGTAECNKGDRPNEGSTCLNNLKVEREEGELSPNGDTEEDNFAAFEDAAISVAPK 971

Query: 1026 AKDWC 1030
             +D C
Sbjct: 972  GRDNC 976


>gi|334182818|ref|NP_001185080.1| paired amphipathic helix protein Sin3-like 3 [Arabidopsis thaliana]
 gi|332192373|gb|AEE30494.1| paired amphipathic helix protein Sin3-like 3 [Arabidopsis thaliana]
          Length = 1326

 Score = 1063 bits (2748), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 589/995 (59%), Positives = 710/995 (71%), Gaps = 79/995 (7%)

Query: 36   GGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFK 95
            GGG AQKLTTNDALAYLKAVKD FQD+R KYD+FLEVMK+FK+QR+DTAGVI RVKELFK
Sbjct: 3    GGGSAQKLTTNDALAYLKAVKDKFQDQRGKYDEFLEVMKNFKSQRVDTAGVITRVKELFK 62

Query: 96   GHRDLILGFNTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSF 155
            GH++LILGFNTFLPKG+EITL  ED QPP KK VEFEEAI+FVNKIKTRFQGDD VYKSF
Sbjct: 63   GHQELILGFNTFLPKGFEITLQPEDGQPPLKKRVEFEEAISFVNKIKTRFQGDDRVYKSF 122

Query: 156  LDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILR 215
            LDILNMYR+++KSITEVYQEV  LF+DH DLL EFTHFLPD+S  ASI   PS + S+ R
Sbjct: 123  LDILNMYRRDSKSITEVYQEVAILFRDHSDLLVEFTHFLPDTSATASI---PSVKTSV-R 178

Query: 216  DRSSAMPTARQVHVDKKERAMASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERR 275
            +R  ++        DKK+R +  H D D   +  D D +R + K +K+  R   KE E R
Sbjct: 179  ERGVSL-------ADKKDRIITPHPDHDYGTEHIDQDRERPIKKENKEHMRGTNKENEHR 231

Query: 276  DDHRRERERDDRDFENDVNRDFSMQRFPHKRKSARKIEDSTAEPLHQGGEGDENFGMHPV 335
            D          RDFE    +    ++F +K++      D  AE  +Q        G  P 
Sbjct: 232  DA---------RDFEPHSKK----EQFLNKKQKLHIRGDDPAEISNQSKLS----GAVPS 274

Query: 336  SSSYDDKNAMKSMFSQELSFCEKVKDKLR-DDYQEFLRCLHLYTKEIITRSELQSLVGDL 394
            SS+YD+K AMKS +SQ+L+  ++VK+KL   +YQEFLRCL+L++KEII+R ELQSLVG+L
Sbjct: 275  SSTYDEKGAMKS-YSQDLAIVDRVKEKLNASEYQEFLRCLNLFSKEIISRPELQSLVGNL 333

Query: 395  LGRYPDLMDGFNGFLARCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDG 454
            +G YPDLMD F  FL +CEK+E LL+ +++KKSLW+EG+ P+     D DRD++ +RDDG
Sbjct: 334  IGVYPDLMDSFIEFLVQCEKNEGLLSGILTKKSLWSEGKYPQPSL--DNDRDQEHKRDDG 391

Query: 455  VKDRDREAREKDRLDKSVAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRL 514
            ++DRD E   K+RL+K+ A +                  AKPI ELDLSNCE+CTPSYRL
Sbjct: 392  LRDRDHE---KERLEKAAANLK----------------WAKPISELDLSNCEQCTPSYRL 432

Query: 515  LPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELD 574
            LPKNY I  ASQ+TE+G  VLNDHWVSVTSGSEDYSF HMRKNQYEESLF+CEDDRFELD
Sbjct: 433  LPKNYPISIASQKTEIGKLVLNDHWVSVTSGSEDYSFSHMRKNQYEESLFKCEDDRFELD 492

Query: 575  MLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFTALNLRCIERLYGDHGLDVMDVL 634
            MLLESVN TTK VEELL KIN+N +KT+ PIRVEDH TALNLRCIERLYGDHGLDVMDVL
Sbjct: 493  MLLESVNSTTKHVEELLTKINSNELKTNSPIRVEDHLTALNLRCIERLYGDHGLDVMDVL 552

Query: 635  RKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSL 694
            +KN SLALPVILTRLKQKQEEWARCRSDF+KVWAEIY+KNY+KSLDHRSFYFKQQDSK L
Sbjct: 553  KKNVSLALPVILTRLKQKQEEWARCRSDFDKVWAEIYAKNYYKSLDHRSFYFKQQDSKKL 612

Query: 695  GAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLIKYSCG 754
              KAL AEIKEI+EKKR EDD LLA AAGNR SI P LEF+Y D D+HEDLYQLIKYSC 
Sbjct: 613  SMKALLAEIKEITEKKR-EDDSLLAFAAGNRLSISPDLEFDYPDHDLHEDLYQLIKYSCA 671

Query: 755  EMCTTEQLDKVMKIWTTFLEPMLGVPSRPQGAEDTEDVVKAKSHTVKSRAASVGDSDGSP 814
            EMC+TEQLDKVMKIWTTF+E + GVPSRPQGAED EDVVK+ +  VKS ++S G+S+GSP
Sbjct: 672  EMCSTEQLDKVMKIWTTFVEQIFGVPSRPQGAEDQEDVVKSMNQNVKSGSSSAGESEGSP 731

Query: 815  DGDAAAMTSKHSNPSRNGDESIPPEQSSSSRAWLPNGDHGIKEDVSVEADHNARKSDNFC 874
               A+   S+ S  SR  +E     Q+S+S     +G  G             R SD  C
Sbjct: 732  HNYASVADSRRSKSSRKANEHSQLGQTSNSER---DGAAG-------------RTSDALC 775

Query: 875  DSSEQDKVQNNAAMADETSGISKQASTNERLIGTNA-AIAAAADQSNGRSNIENTSGLSV 933
            ++++ +K+  N   +DE    SKQA + ER   + A A+    DQSNG S+I + +G   
Sbjct: 776  ETAQHEKMLKNVVTSDEKPE-SKQAVSIERAHDSTALAVDGLLDQSNGGSSIVHMTGHCN 834

Query: 934  AHSRPGNHIVEGGLELRSSNEILPSSEGGECSRQNISTNGVMTEGAKILRYNAESVKQFK 993
             + +P     E  LEL+ ++   P  E G    + + TNG+  E    +  + E     K
Sbjct: 835  NNLKPVTCGTE--LELKMNDGNGPKLEVG---NKKLLTNGIAVE----ITSDQEMAGTSK 885

Query: 994  IEREEGELSPNGDFEEDNFAVYGESGLEAVHKAKD 1028
            +EREEGELSPNGDFEEDNFAVY ++  E   KA D
Sbjct: 886  VEREEGELSPNGDFEEDNFAVYAKTDFETFSKAND 920


>gi|102140002|gb|ABF70137.1| transcriptional repressor protein-related [Musa balbisiana]
          Length = 1364

 Score = 1053 bits (2722), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 568/1019 (55%), Positives = 708/1019 (69%), Gaps = 100/1019 (9%)

Query: 34   GGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKEL 93
                G   KLTTNDALAYLKAVKDIF DKREKYD+FLEVMKDFK+QRIDT GVI RVKEL
Sbjct: 4    AAAAGSTSKLTTNDALAYLKAVKDIFHDKREKYDEFLEVMKDFKSQRIDTNGVIMRVKEL 63

Query: 94   FKGHRDLILGFNTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYK 153
            FKGHRDLILGFNTFLPKGYEI LP E      KKPVEFEEAI FVNKIK+RFQ D+HVYK
Sbjct: 64   FKGHRDLILGFNTFLPKGYEIKLPEE------KKPVEFEEAIVFVNKIKSRFQNDEHVYK 117

Query: 154  SFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSI 213
            SFLDILNMYR+ENK I EVY+EV ALFQ++ DLLEEFTHFLPD+S   + H     R+  
Sbjct: 118  SFLDILNMYRRENKPIREVYEEVAALFQNNQDLLEEFTHFLPDASATCAPHLGYPDRSFA 177

Query: 214  LRD-RSSAMPTARQVHVDKKERAMASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKER 272
             RD RS  MP+AR+   DK+E+A  SHA+RDLS+DR D +HD         QRR  EKE+
Sbjct: 178  HRDERSPVMPSARE---DKREKAYTSHANRDLSIDRLDMEHD--------SQRRHAEKEK 226

Query: 273  ERRDDH-RRERERDDRDFEND---VNRDFSMQRFPHKRKSARKIEDSTAEPLHQGGEGDE 328
            +R++D  +R  ERDD++ E+D   ++ +   ++ P     +R+++D   EP+HQGG    
Sbjct: 227  DRKEDRDKRYHERDDKELEHDGGDLDNEQCRRKLP-----SRRVDDPIPEPMHQGG---- 277

Query: 329  NFGMHPVSSS-YDDKNAMKSMFSQELSFCEKVKDKL-RDDYQEFLRCLHLYTKEIITRSE 386
            N  M+ +S+S +DDKNA+KS++++E +FCEKVK+KL RD YQEFL+CLH+Y+KEII R+E
Sbjct: 278  NIAMNSISASQFDDKNALKSVYTREFNFCEKVKEKLHRDTYQEFLQCLHIYSKEIINRTE 337

Query: 387  LQSLVGDLLGRYPDLMDGFNGFLARCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRD 446
            L++LV D+LG+YPDLM+ F                      L NEG +   +K+ED+DR+
Sbjct: 338  LKNLVSDILGKYPDLMEEF----------------------LCNEGHMAMPIKIEDKDRE 375

Query: 447  RDRERDDGVKDRDREAREKDRLDKSVAFV---NKDVGPKMSMYSSKDKY-LAKPIQELDL 502
            RD E +D         REKD   +        +K    K  + S+K+KY L KPI ELDL
Sbjct: 376  RDHEIND---------REKDHERERNFERERGDKGAAHKAPLISNKEKYNLWKPISELDL 426

Query: 503  SNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEES 562
            SNC+RC+PSY LLPKNY IP ASQRTELG  VLND WVSVTSGSEDYSFKHMRKNQYEES
Sbjct: 427  SNCQRCSPSYCLLPKNYSIPPASQRTELGESVLNDVWVSVTSGSEDYSFKHMRKNQYEES 486

Query: 563  LFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFTALNLRCIERL 622
            LFRCEDDRFELDMLLESVN TTK+VEELLE + +  +K++ PI +ED  T+LNLRCIERL
Sbjct: 487  LFRCEDDRFELDMLLESVNATTKQVEELLEMMQD-PVKSENPIHIEDTLTSLNLRCIERL 545

Query: 623  YGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHR 682
            YGDHGLDVMDVLRKN+SL+LPVILTRLKQKQEEW RCRSDFNKVWAEIY++NYHKSLDHR
Sbjct: 546  YGDHGLDVMDVLRKNSSLSLPVILTRLKQKQEEWTRCRSDFNKVWAEIYARNYHKSLDHR 605

Query: 683  SFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIH 742
            SFYFKQQD+KSL  KAL AEIKEI++K +KEDD++L+IAA NR+ IVP++EFEY D DIH
Sbjct: 606  SFYFKQQDAKSLSTKALLAEIKEINDKMKKEDDIVLSIAAKNRQPIVPNMEFEYIDLDIH 665

Query: 743  EDLYQLIKYSCGEMCTT-EQLDKVMKIWTTFLEPMLGVPSRPQGAEDTEDVVKAKSHTVK 801
            EDLY++I+YSCGE+CT+ +Q+DKV+K+WTTFLEP++G   + +GAE   D VK  SH+ K
Sbjct: 666  EDLYRIIRYSCGEVCTSLDQVDKVIKLWTTFLEPLMGFQPQKRGAEGMRD-VKPNSHSGK 724

Query: 802  SRAASVGDSDGSPDGDAAAMTSKHSNPSRNGDESIPPEQSSSSRAWLPNGDHGIKEDVSV 861
            S  A +  S+GSPD D    T +      NG E+I  EQ +S R  L NGD  +  +   
Sbjct: 725  SSIAGLVKSNGSPDADGTGATKQ-----SNGGENILSEQVASCRTKLANGDTTVAGNCFH 779

Query: 862  EADHNARKSDNFCDSSEQDKVQNNAAMADETSGISKQASTNERLIGTNAAIAAAADQSNG 921
            +      +  N C++  Q +VQ +A  ADE+SGI+ Q  + E L   N +    A++S+ 
Sbjct: 780  DVGRTTHRVGNLCNNPLQRRVQGSAPKADESSGITVQNVSAEHL-SDNTSFVGRAEESHS 838

Query: 922  RSNIENTSGLSVAHSRPGNHIVEGGLELRSSNEILPSSEGGECSRQNISTNGVMT----- 976
            R+N+E  SG+  A  +  +   E  +E R+  E+      G+  R  IS N   T     
Sbjct: 839  RTNLETVSGVGGASLQTSHCGTEMLVEPRAYLEV------GQTGRSIISVNCGGTADCNK 892

Query: 977  -----EGAKILRYNAESVKQFKIEREEGELSPNGDFEEDNFAVYGESGLEAVHKAKDWC 1030
                 EG+  L          K+EREEGELSPNGD EEDNFA + ++ +    K  D C
Sbjct: 893  GDGPNEGSTCL-------NNLKVEREEGELSPNGDTEEDNFAAFEDAAISVAPKGMDNC 944


>gi|2829870|gb|AAC00578.1| Hypothetical protein [Arabidopsis thaliana]
          Length = 1263

 Score = 1050 bits (2714), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 589/1008 (58%), Positives = 711/1008 (70%), Gaps = 92/1008 (9%)

Query: 36   GGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFK 95
            GGG AQKLTTNDALAYLKAVKD FQD+R KYD+FLEVMK+FK+QR+DTAGVI RVKELFK
Sbjct: 3    GGGSAQKLTTNDALAYLKAVKDKFQDQRGKYDEFLEVMKNFKSQRVDTAGVITRVKELFK 62

Query: 96   GHRDLILGFNTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSF 155
            GH++LILGFNTFLPKG+EITL  ED QPP KK VEFEEAI+FVNKIKTRFQGDD VYKSF
Sbjct: 63   GHQELILGFNTFLPKGFEITLQPEDGQPPLKKRVEFEEAISFVNKIKTRFQGDDRVYKSF 122

Query: 156  LDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILR 215
            LDILNMYR+++KSITEVYQEV  LF+DH DLL EFTHFLPD+S  ASI   PS + S+ R
Sbjct: 123  LDILNMYRRDSKSITEVYQEVAILFRDHSDLLVEFTHFLPDTSATASI---PSVKTSV-R 178

Query: 216  DRSSAMPTARQVHVDKKERAMASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERR 275
            +R  ++        DKK+R +  H D D   +  D D +R + K +K+  R   KE E R
Sbjct: 179  ERGVSL-------ADKKDRIITPHPDHDYGTEHIDQDRERPIKKENKEHMRGTNKENEHR 231

Query: 276  DDHRRERERDDRDFENDVNRDFSMQRFPHKRKSARKIEDSTAEPLHQGGEGDENFGMHPV 335
            D          RDFE    +    ++F +K++      D  AE  +Q        G  P 
Sbjct: 232  DA---------RDFEPHSKK----EQFLNKKQKLHIRGDDPAEISNQSKLS----GAVPS 274

Query: 336  SSSYDDKNAMKSMFSQELSFCEKVKDKLR-DDYQEFLRCLHLYTKEIITRSELQSLVGDL 394
            SS+YD+K AMKS +SQ+L+  ++VK+KL   +YQEFLRCL+L++KEII+R ELQSLVG+L
Sbjct: 275  SSTYDEKGAMKS-YSQDLAIVDRVKEKLNASEYQEFLRCLNLFSKEIISRPELQSLVGNL 333

Query: 395  LGRYPDLMDGFNGFLARCEKSEE-------------LLADVMSKKSLWNEGRIPKSVKVE 441
            +G YPDLMD F  FL +CEK+E+             LL+ +++KKSLW+EG+ P+     
Sbjct: 334  IGVYPDLMDSFIEFLVQCEKNEKRQICNLLNLLAEGLLSGILTKKSLWSEGKYPQPSL-- 391

Query: 442  DRDRDRDRERDDGVKDRDREAREKDRLDKSVAFVNKDVGPKMSMYSSKDKYLAKPIQELD 501
            D DRD++ +RDDG++DRD E   K+RL+K+ A +                  AKPI ELD
Sbjct: 392  DNDRDQEHKRDDGLRDRDHE---KERLEKAAANLK----------------WAKPISELD 432

Query: 502  LSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEE 561
            LSNCE+CTPSYRLLPKNY I  ASQ+TE+G  VLNDHWVSVTSGSEDYSF HMRKNQYEE
Sbjct: 433  LSNCEQCTPSYRLLPKNYPISIASQKTEIGKLVLNDHWVSVTSGSEDYSFSHMRKNQYEE 492

Query: 562  SLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFTALNLRCIER 621
            SLF+CEDDRFELDMLLESVN TTK VEELL KIN+N +KT+ PIRVEDH TALNLRCIER
Sbjct: 493  SLFKCEDDRFELDMLLESVNSTTKHVEELLTKINSNELKTNSPIRVEDHLTALNLRCIER 552

Query: 622  LYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDH 681
            LYGDHGLDVMDVL+KN SLALPVILTRLKQKQEEWARCRSDF+KVWAEIY+KNY+KSLDH
Sbjct: 553  LYGDHGLDVMDVLKKNVSLALPVILTRLKQKQEEWARCRSDFDKVWAEIYAKNYYKSLDH 612

Query: 682  RSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDI 741
            RSFYFKQQDSK L  KAL AEIKEI+EKKR EDD LLA AAGNR SI P LEF+Y D D+
Sbjct: 613  RSFYFKQQDSKKLSMKALLAEIKEITEKKR-EDDSLLAFAAGNRLSISPDLEFDYPDHDL 671

Query: 742  HEDLYQLIKYSCGEMCTTEQLDKVMKIWTTFLEPMLGVPSRPQGAEDTEDVVKAKSHTVK 801
            HEDLYQLIKYSC EMC+TEQLDKVMKIWTTF+E + GVPSRPQGAED EDVVK+ +  VK
Sbjct: 672  HEDLYQLIKYSCAEMCSTEQLDKVMKIWTTFVEQIFGVPSRPQGAEDQEDVVKSMNQNVK 731

Query: 802  SRAASVGDSDGSPDGDAAAMTSKHSNPSRNGDESIPPEQSSSSRAWLPNGDHGIKEDVSV 861
            S ++S G+S+GSP   A+   S+ S  SR  +E     Q+S+S     +G  G       
Sbjct: 732  SGSSSAGESEGSPHNYASVADSRRSKSSRKANEHSQLGQTSNSER---DGAAG------- 781

Query: 862  EADHNARKSDNFCDSSEQDKVQNNAAMADETSGISKQASTNERLIGTNA-AIAAAADQSN 920
                  R SD  C++++ +K+  N   +DE    SKQA + ER   + A A+    DQSN
Sbjct: 782  ------RTSDALCETAQHEKMLKNVVTSDEKPE-SKQAVSIERAHDSTALAVDGLLDQSN 834

Query: 921  GRSNIENTSGLSVAHSRPGNHIVEGGLELRSSNEILPSSEGGECSRQNISTNGVMTEGAK 980
            G S+I + +G    + +P     E  LEL+ ++   P  E G    + + TNG+  E   
Sbjct: 835  GGSSIVHMTGHCNNNLKPVTCGTE--LELKMNDGNGPKLEVG---NKKLLTNGIAVE--- 886

Query: 981  ILRYNAESVKQFKIEREEGELSPNGDFEEDNFAVYGESGLEAVHKAKD 1028
             +  + E     K+EREEGELSPNGDFEEDNFAVY ++  E   KA D
Sbjct: 887  -ITSDQEMAGTSKVEREEGELSPNGDFEEDNFAVYAKTDFETFSKAND 933


>gi|148829026|gb|ABR13973.1| SIN3-like protein 1 [Arabidopsis thaliana]
          Length = 1249

 Score = 1048 bits (2710), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 583/995 (58%), Positives = 704/995 (70%), Gaps = 79/995 (7%)

Query: 36   GGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFK 95
            GGG AQKLTTNDALAYLKAVKD FQD+R KYD+FLEVMK+FK+QR+DTAGVI RVKELFK
Sbjct: 12   GGGSAQKLTTNDALAYLKAVKDKFQDQRGKYDEFLEVMKNFKSQRVDTAGVITRVKELFK 71

Query: 96   GHRDLILGFNTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSF 155
            GH++LILGFNTFLPKG+EITL  ED QPP KK VEFEEAI+FVNKIKTRFQGDD VYKSF
Sbjct: 72   GHQELILGFNTFLPKGFEITLQPEDGQPPLKKRVEFEEAISFVNKIKTRFQGDDRVYKSF 131

Query: 156  LDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILR 215
            LDILNMYR+++KSI+E Y EV  LF+DH DLL EFTHFLPD+S  ASI   PS + S+ R
Sbjct: 132  LDILNMYRRDSKSISEAYTEVYILFRDHSDLLVEFTHFLPDTSATASI---PSVKTSV-R 187

Query: 216  DRSSAMPTARQVHVDKKERAMASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERR 275
            +R  ++        DKK+R +  H D D   +  D D +R + K +K+  R   KE E R
Sbjct: 188  ERGVSL-------ADKKDRIITPHPDHDYGTEHIDQDRERPIKKENKEHMRGTNKENEHR 240

Query: 276  DDHRRERERDDRDFENDVNRDFSMQRFPHKRKSARKIEDSTAEPLHQGGEGDENFGMHPV 335
            D          RDFE    +    ++F +K++      D  AE  +Q        G  P 
Sbjct: 241  DA---------RDFEPHSKK----EQFLNKKQKLHIRGDDPAEISNQSKLS----GAVPS 283

Query: 336  SSSYDDKNAMKSMFSQELSFCEKVKDKLR-DDYQEFLRCLHLYTKEIITRSELQSLVGDL 394
            SS+YD+K AMKS +SQ+L+  ++VK+KL   +YQEFLRCL+L++KEII+R ELQSLVG+L
Sbjct: 284  SSTYDEKGAMKS-YSQDLAIVDRVKEKLNASEYQEFLRCLNLFSKEIISRPELQSLVGNL 342

Query: 395  LGRYPDLMDGFNGFLARCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDG 454
            +G YPDLMD F  FL +CEK+E LL+ +++K  L  EG+ P+     D DRD++ +RDDG
Sbjct: 343  IGVYPDLMDSFIEFLVQCEKNEGLLSGILTKNLLQGEGKYPQPSL--DNDRDQEHKRDDG 400

Query: 455  VKDRDREAREKDRLDKSVAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRL 514
            ++DRD E   K+RL+K+ A +                  AKPI ELDLSNCE+CTPSYRL
Sbjct: 401  LRDRDHE---KERLEKAAANLK----------------WAKPISELDLSNCEQCTPSYRL 441

Query: 515  LPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELD 574
            LPKNY I  ASQ+TE+G  VLNDHWVSVTSGSEDYSF HMRKNQYEESLF+CEDDRFELD
Sbjct: 442  LPKNYPISIASQKTEIGKLVLNDHWVSVTSGSEDYSFSHMRKNQYEESLFKCEDDRFELD 501

Query: 575  MLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFTALNLRCIERLYGDHGLDVMDVL 634
            MLLESVN TTK VEELL KIN+N +KT+ PIRVEDH TALNLRCIERLYGDHGLDVMDVL
Sbjct: 502  MLLESVNSTTKHVEELLTKINSNELKTNSPIRVEDHLTALNLRCIERLYGDHGLDVMDVL 561

Query: 635  RKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSL 694
            +KN SLALPVILTRLKQKQEEWARCRSDF+KVWAEIY+KNY+KSLDHRSFYFKQQDSK L
Sbjct: 562  KKNVSLALPVILTRLKQKQEEWARCRSDFDKVWAEIYAKNYYKSLDHRSFYFKQQDSKKL 621

Query: 695  GAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLIKYSCG 754
              KAL AEIKEI+EKKR EDD LLA AAGNR SI P LEF+Y D D+HEDLYQLIKYSC 
Sbjct: 622  SMKALLAEIKEITEKKR-EDDSLLAFAAGNRLSISPDLEFDYPDHDLHEDLYQLIKYSCA 680

Query: 755  EMCTTEQLDKVMKIWTTFLEPMLGVPSRPQGAEDTEDVVKAKSHTVKSRAASVGDSDGSP 814
            EMC+TEQLDKVMKIWTTF+E + GVPSRPQGAED EDVVK+ +  VKS ++S G+S+GSP
Sbjct: 681  EMCSTEQLDKVMKIWTTFVEQIFGVPSRPQGAEDQEDVVKSMNQNVKSGSSSAGESEGSP 740

Query: 815  DGDAAAMTSKHSNPSRNGDESIPPEQSSSSRAWLPNGDHGIKEDVSVEADHNARKSDNFC 874
               A+   S+ S  SR  +E     Q+S+S     +G  G             R SD  C
Sbjct: 741  HNYASVADSRRSKSSRKANEHSQLGQTSNSER---DGAAG-------------RTSDALC 784

Query: 875  DSSEQDKVQNNAAMADETSGISKQASTNERLIGTNA-AIAAAADQSNGRSNIENTSGLSV 933
            ++++ +K+  N   +DE    SKQA + ER   + A A+    DQSNG S+I + +G   
Sbjct: 785  ETAQHEKMLKNVVTSDEKPE-SKQAVSIERAHDSTALAVDGLLDQSNGGSSIVHMTGHCN 843

Query: 934  AHSRPGNHIVEGGLELRSSNEILPSSEGGECSRQNISTNGVMTEGAKILRYNAESVKQFK 993
             + +P     E  LEL+ ++   P  E G    + + TNG+  E    +  + E     K
Sbjct: 844  NNLKPVTCGTE--LELKMNDGNGPKLEVG---NKKLLTNGIAVE----ITSDQEMAGTSK 894

Query: 994  IEREEGELSPNGDFEEDNFAVYGESGLEAVHKAKD 1028
            +EREEGELSPNGDFEEDNFAVY ++  E   KA D
Sbjct: 895  VEREEGELSPNGDFEEDNFAVYAKTDFETFSKAND 929


>gi|334182816|ref|NP_173829.3| paired amphipathic helix protein Sin3-like 3 [Arabidopsis thaliana]
 gi|334302875|sp|O48686.3|SNL3_ARATH RecName: Full=Paired amphipathic helix protein Sin3-like 3; AltName:
            Full=Histone deacetylase complex subunit Sin3;
            Short=AtSin3; AltName: Full=Transcriptional corepressor
            Sin3
 gi|332192372|gb|AEE30493.1| paired amphipathic helix protein Sin3-like 3 [Arabidopsis thaliana]
          Length = 1330

 Score = 1048 bits (2709), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 586/999 (58%), Positives = 706/999 (70%), Gaps = 83/999 (8%)

Query: 36   GGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFK 95
            GGG AQKLTTNDALAYLKAVKD FQD+R KYD+FLEVMK+FK+QR+DTAGVI RVKELFK
Sbjct: 3    GGGSAQKLTTNDALAYLKAVKDKFQDQRGKYDEFLEVMKNFKSQRVDTAGVITRVKELFK 62

Query: 96   GHRDLILGFNTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSF 155
            GH++LILGFNTFLPKG+EITL  ED QPP KK VEFEEAI+FVNKIKTRFQGDD VYKSF
Sbjct: 63   GHQELILGFNTFLPKGFEITLQPEDGQPPLKKRVEFEEAISFVNKIKTRFQGDDRVYKSF 122

Query: 156  LDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILR 215
            LDILNMYR+++KSITEVYQEV  LF+DH DLL EFTHFLPD+S  ASI   PS + S+ R
Sbjct: 123  LDILNMYRRDSKSITEVYQEVAILFRDHSDLLVEFTHFLPDTSATASI---PSVKTSV-R 178

Query: 216  DRSSAMPTARQVHVDKKERAMASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERR 275
            +R  ++        DKK+R +  H D D   +  D D +R + K +K+  R   KE E R
Sbjct: 179  ERGVSL-------ADKKDRIITPHPDHDYGTEHIDQDRERPIKKENKEHMRGTNKENEHR 231

Query: 276  DDHRRERERDDRDFENDVNRDFSMQRFPHKRKSARKIEDSTAEPLHQGGEGDENFGMHPV 335
            D          RDFE    +    ++F +K++      D  AE  +Q        G  P 
Sbjct: 232  DA---------RDFEPHSKK----EQFLNKKQKLHIRGDDPAEISNQSKLS----GAVPS 274

Query: 336  SSSYDDKNAMKSMFSQELSFCEKVKDKLR-DDYQEFLRCLHLYTKEIITRSELQSLVGDL 394
            SS+YD+K AMKS +SQ+L+  ++VK+KL   +YQEFLRCL+L++KEII+R ELQSLVG+L
Sbjct: 275  SSTYDEKGAMKS-YSQDLAIVDRVKEKLNASEYQEFLRCLNLFSKEIISRPELQSLVGNL 333

Query: 395  LGRYPDLMDGFNGFLARCEKSEELLADVMSKKS----LWNEGRIPKSVKVEDRDRDRDRE 450
            +G YPDLMD F  FL +CEK+E LL+ +++K      L  EG+ P+     D DRD++ +
Sbjct: 334  IGVYPDLMDSFIEFLVQCEKNEGLLSGILTKSKSTYLLQGEGKYPQPSL--DNDRDQEHK 391

Query: 451  RDDGVKDRDREAREKDRLDKSVAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTP 510
            RDDG++DRD E   K+RL+K+ A +                  AKPI ELDLSNCE+CTP
Sbjct: 392  RDDGLRDRDHE---KERLEKAAANLK----------------WAKPISELDLSNCEQCTP 432

Query: 511  SYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDR 570
            SYRLLPKNY I  ASQ+TE+G  VLNDHWVSVTSGSEDYSF HMRKNQYEESLF+CEDDR
Sbjct: 433  SYRLLPKNYPISIASQKTEIGKLVLNDHWVSVTSGSEDYSFSHMRKNQYEESLFKCEDDR 492

Query: 571  FELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFTALNLRCIERLYGDHGLDV 630
            FELDMLLESVN TTK VEELL KIN+N +KT+ PIRVEDH TALNLRCIERLYGDHGLDV
Sbjct: 493  FELDMLLESVNSTTKHVEELLTKINSNELKTNSPIRVEDHLTALNLRCIERLYGDHGLDV 552

Query: 631  MDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQD 690
            MDVL+KN SLALPVILTRLKQKQEEWARCRSDF+KVWAEIY+KNY+KSLDHRSFYFKQQD
Sbjct: 553  MDVLKKNVSLALPVILTRLKQKQEEWARCRSDFDKVWAEIYAKNYYKSLDHRSFYFKQQD 612

Query: 691  SKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLIK 750
            SK L  KAL AEIKEI+EKKR EDD LLA AAGNR SI P LEF+Y D D+HEDLYQLIK
Sbjct: 613  SKKLSMKALLAEIKEITEKKR-EDDSLLAFAAGNRLSISPDLEFDYPDHDLHEDLYQLIK 671

Query: 751  YSCGEMCTTEQLDKVMKIWTTFLEPMLGVPSRPQGAEDTEDVVKAKSHTVKSRAASVGDS 810
            YSC EMC+TEQLDKVMKIWTTF+E + GVPSRPQGAED EDVVK+ +  VKS ++S G+S
Sbjct: 672  YSCAEMCSTEQLDKVMKIWTTFVEQIFGVPSRPQGAEDQEDVVKSMNQNVKSGSSSAGES 731

Query: 811  DGSPDGDAAAMTSKHSNPSRNGDESIPPEQSSSSRAWLPNGDHGIKEDVSVEADHNARKS 870
            +GSP   A+   S+ S  SR  +E     Q+S+S     +G  G             R S
Sbjct: 732  EGSPHNYASVADSRRSKSSRKANEHSQLGQTSNSER---DGAAG-------------RTS 775

Query: 871  DNFCDSSEQDKVQNNAAMADETSGISKQASTNERLIGTNA-AIAAAADQSNGRSNIENTS 929
            D  C++++ +K+  N   +DE    SKQA + ER   + A A+    DQSNG S+I + +
Sbjct: 776  DALCETAQHEKMLKNVVTSDEKPE-SKQAVSIERAHDSTALAVDGLLDQSNGGSSIVHMT 834

Query: 930  GLSVAHSRPGNHIVEGGLELRSSNEILPSSEGGECSRQNISTNGVMTEGAKILRYNAESV 989
            G    + +P     E  LEL+ ++   P  E G    + + TNG+  E    +  + E  
Sbjct: 835  GHCNNNLKPVTCGTE--LELKMNDGNGPKLEVG---NKKLLTNGIAVE----ITSDQEMA 885

Query: 990  KQFKIEREEGELSPNGDFEEDNFAVYGESGLEAVHKAKD 1028
               K+EREEGELSPNGDFEEDNFAVY ++  E   KA D
Sbjct: 886  GTSKVEREEGELSPNGDFEEDNFAVYAKTDFETFSKAND 924


>gi|297838781|ref|XP_002887272.1| paired amphipathic helix repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
 gi|297333113|gb|EFH63531.1| paired amphipathic helix repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 1364

 Score = 1047 bits (2707), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 583/1029 (56%), Positives = 723/1029 (70%), Gaps = 101/1029 (9%)

Query: 36   GGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFK 95
            GG   QKLTTNDALAYLKAVKD FQDKR+KYD+FLEVMKDFKAQR+DT GVI RVKELFK
Sbjct: 3    GGSSVQKLTTNDALAYLKAVKDKFQDKRDKYDEFLEVMKDFKAQRVDTTGVILRVKELFK 62

Query: 96   GHRDLILGFNTFLPKGYEITLPLEDEQPP-PKKPVEFEEAINFVNKIKTRFQGDDHVYKS 154
            G+R+LILGFNTFLPKG+EITL  ED+QP  PKKPVEFEEAI+FVNKIKTRFQGDD VYKS
Sbjct: 63   GNRELILGFNTFLPKGFEITLRPEDDQPAAPKKPVEFEEAISFVNKIKTRFQGDDRVYKS 122

Query: 155  FLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSIL 214
            FLDILNMYRKENKSITEVYQEV  LF+DH DLL EFTHFLPD+S  AS +         +
Sbjct: 123  FLDILNMYRKENKSITEVYQEVAILFRDHHDLLVEFTHFLPDTSATASTN---DSLKMPV 179

Query: 215  RDRS-SAMPTARQVHVDKKERAMASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERE 273
            RDR   ++P  RQ+ +DKK+R + S  DR L  +  D DH+R LLK  K+  RR +K+ +
Sbjct: 180  RDRGIKSLPNMRQIDLDKKDRIITSLPDRALKTEHMDVDHERSLLKDSKEDVRRIDKKND 239

Query: 274  RRDDHRRERERDDRDFENDVNRDFSMQRFPHKRKSARKIEDSTAEPLHQGGEGDENFGMH 333
              DD  R   +D R  E+D +++     F +K+K   K +D +AE  +Q  EGD+ +G  
Sbjct: 240  YMDDRDR---KDYRGLEHDSHKE---HFFNNKKKLILK-DDDSAEMSNQAREGDKFYGAI 292

Query: 334  PVSSSYDDKNA---MKSMFSQELSFCEKVKDKL-RDDYQEFLRCLHLYTKEIITRSELQS 389
            P SS+YD+K A   + +  SQEL+F ++VK KL   + QEFLRCL+LY+KEII++ ELQS
Sbjct: 293  PSSSTYDEKGATLYVMTGHSQELAFVDRVKAKLDTAENQEFLRCLNLYSKEIISQPELQS 352

Query: 390  LVGDLLGRYPDLMDGFNGFLARCEKSEELLADVMSK----------------KSLWNEGR 433
            LV DL+G YPDLMD F  FLA+C+K++ LL+ ++SK                +SLW+EG+
Sbjct: 353  LVSDLIGVYPDLMDAFRVFLAQCDKNDGLLSGIVSKSKSSYFCDVALIAVTIESLWSEGK 412

Query: 434  IPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRLDKSVAFVNKDVGPKMSMYSSKDKYL 493
             P+  K +D+D DR+RE+ +  ++RDRE   K+RL+K+ A                 +  
Sbjct: 413  CPQPTKSQDKDTDREREKIERYRERDRE---KERLEKAAA----------------SQKW 453

Query: 494  AKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKH 553
            AKPI ELDLSNCE+CTPSYR LPKNY IP ASQ+ E+G++VLNDHWVSVTSGSEDYSFKH
Sbjct: 454  AKPISELDLSNCEQCTPSYRRLPKNYPIPIASQKMEIGSQVLNDHWVSVTSGSEDYSFKH 513

Query: 554  MRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFTA 613
            MRKNQYEESLF+CEDDRFELDMLLESV   T RVEELL KIN+N +KTD PI +EDH TA
Sbjct: 514  MRKNQYEESLFKCEDDRFELDMLLESVISATNRVEELLAKINSNELKTDTPICIEDHLTA 573

Query: 614  LNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSK 673
            LNLRCIERLYGDHGLDV+D+L+KNA LALPVILTRLKQKQEEWARCR++FNKVWA+IY+K
Sbjct: 574  LNLRCIERLYGDHGLDVLDLLKKNAYLALPVILTRLKQKQEEWARCRTEFNKVWADIYTK 633

Query: 674  NYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLE 733
            NYH+SLDHRSFYFKQQDSK+L  KAL AEIKEISEKKR EDD LLA+AAGNRR+I  ++ 
Sbjct: 634  NYHRSLDHRSFYFKQQDSKNLSTKALLAEIKEISEKKRGEDDALLALAAGNRRTISSNMS 693

Query: 734  FEYSDPDIHEDLYQLIKYSCGEMCTTEQLDKVMKIWTTFLEPMLGVPSRPQGAEDTEDVV 793
            F+Y DPD+HEDLYQLIKYSCGEMC+TEQLDKVMK+WT FLEP+ GVPSRPQGAED ED V
Sbjct: 694  FDYPDPDLHEDLYQLIKYSCGEMCSTEQLDKVMKVWTEFLEPIFGVPSRPQGAEDREDAV 753

Query: 794  KAKSHTVKSRAASVGDSDGSPDGDAAAMTSKHSNPSRNGDESIPPEQSSSSRAWLPNGDH 853
            K+   T + R  +V     SP   A+   S  SN  R G+E+    Q+S           
Sbjct: 754  KS---TNQDREDAV-----SPQNGASIANSMRSNGPRKGNENNQVRQASE---------- 795

Query: 854  GIKEDVSVEADHNARKSDNFCDSSEQ-DKVQNNAAMADETSGISKQASTNERLIGTNA-A 911
             + +DV+     +   S   CD++ Q DK+  N    DE    +KQA + E    +NA  
Sbjct: 796  -LDKDVTSSKTSDVLLS---CDNNTQNDKMPKNLTTPDERPE-TKQAVSIECAHNSNALP 850

Query: 912  IAAAADQSNGR-SNIE-----------NTSGLSVAHSRPGNHIVEGGLELRSSNEILPSS 959
            +     Q NG+ SN+             + GLS ++ +P + +  G  EL+ ++   P  
Sbjct: 851  VDGLLPQRNGKISNLSIADDELYPFLLYSPGLSNSNPKP-SALTSGTEELKPNHVNGPRV 909

Query: 960  EGGECSRQNISTNGVMTEGAKILRYNAESVKQFKIEREEGELSPNGDFEEDNFAVYGESG 1019
            E G+     +  NG + EG     +  E+    K+EREEGELSP G+FEEDNFAV+GE+ 
Sbjct: 910  EIGD---NRVIPNGTLAEG-----FAGET----KVEREEGELSPTGEFEEDNFAVHGEND 957

Query: 1020 LEAVHKAKD 1028
            +EA+ K+K+
Sbjct: 958  MEALSKSKE 966


>gi|2194132|gb|AAB61107.1| F20P5.21 gene product [Arabidopsis thaliana]
          Length = 1383

 Score = 1045 bits (2702), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 586/1045 (56%), Positives = 717/1045 (68%), Gaps = 121/1045 (11%)

Query: 36   GGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFK 95
            GG  AQKLTTNDALAYLKAVKD FQDKR+KYD+FLEVMKDFKAQR+DT GVI RVKELFK
Sbjct: 3    GGSSAQKLTTNDALAYLKAVKDKFQDKRDKYDEFLEVMKDFKAQRVDTTGVILRVKELFK 62

Query: 96   GHRDLILGFNTFLPKGYEITLPLEDEQPP-PKKPVEFEEAINFVNKIKTRFQGDDHVYKS 154
            G+R+LILGFNTFLPKG+EITL  ED+QP  PKKPVEFEEAI+FVNKIKTRFQGDD VYKS
Sbjct: 63   GNRELILGFNTFLPKGFEITLRPEDDQPAAPKKPVEFEEAISFVNKIKTRFQGDDRVYKS 122

Query: 155  FLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIH---YVPSGRN 211
            FLDILNMYRKENKSITEVY EV  LF+DH DLL EFTHFLPD+S  AS +    VP    
Sbjct: 123  FLDILNMYRKENKSITEVYHEVAILFRDHHDLLGEFTHFLPDTSATASTNDSVKVP---- 178

Query: 212  SILRDRS-SAMPTARQVHVDKKERAMASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEK 270
              +RDR   ++PT RQ+ +DKK+R + SH +R L  +  D DH+R LLK  K++ RR +K
Sbjct: 179  --VRDRGIKSLPTMRQIDLDKKDRIITSHPNRALKTENMDVDHERSLLKDSKEEVRRIDK 236

Query: 271  ERERRDDHRRERERDDRDFENDVNRDFSMQRFPHKRKSARKIEDSTAEPLHQGGEGDENF 330
            + +  DD  R   +D R  ++D +++     F  K+K  RK +D +AE   Q  EGD+  
Sbjct: 237  KNDFMDDRDR---KDYRGLDHDSHKE---HFFNSKKKLIRK-DDDSAEMSDQAREGDKFS 289

Query: 331  GMHPVSSSYDDKNAMKSMF---SQELSFCEKVKDKL-RDDYQEFLRCLHLYTKEIITRSE 386
            G  P SS+YD+K  +       SQEL+F ++VK KL   D QEFLRCL+LY+KEII++ E
Sbjct: 290  GAIPSSSTYDEKGFIIDFLESHSQELAFVDRVKAKLDTADNQEFLRCLNLYSKEIISQPE 349

Query: 387  LQSLVGDLLGRYPDLMDGFNGFLARCEKSEELLADVMSK----------------KSLWN 430
            LQSLV DL+G YPDLMD F  FLA+C+K++ LL+ ++SK                +SLW+
Sbjct: 350  LQSLVSDLIGVYPDLMDAFKVFLAQCDKNDGLLSGIVSKSKSSTFYNILLTYLFGQSLWS 409

Query: 431  EGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRLDKSVAFVNKDVGPKMSMYSSKD 490
            EG+ P+  K  D+D DR+RE+ +  ++RDRE   K+RL+K  A                 
Sbjct: 410  EGKCPQPTKSLDKDTDREREKIERYRERDRE---KERLEKVAA----------------S 450

Query: 491  KYLAKPIQELDLSNCERCTPSYRLLPKN-----------YLIPSASQRTELGAEVLNDHW 539
            +  AKPI ELDLSNCE+CTPSYR LPKN           Y IP ASQ+ E+G++VLNDHW
Sbjct: 451  QKWAKPISELDLSNCEQCTPSYRRLPKNLNVHTYFVLLQYPIPIASQKMEIGSQVLNDHW 510

Query: 540  VSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTI 599
            VSVTSGSEDYSFKHMRKNQYEESLF+CEDDRFELDMLLESV   T RVEELL KIN+N +
Sbjct: 511  VSVTSGSEDYSFKHMRKNQYEESLFKCEDDRFELDMLLESVISATNRVEELLAKINSNEL 570

Query: 600  KTDGPIRVEDHFTALNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARC 659
            KTD PI +EDH TALNLRCIERLY DHGLDV+D+L+KNA LALPVILTRLKQKQEEWARC
Sbjct: 571  KTDTPICIEDHLTALNLRCIERLYSDHGLDVLDLLKKNAYLALPVILTRLKQKQEEWARC 630

Query: 660  RSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLA 719
            R++FNKVWA+IY+KNYH+SLDHRSFYFKQQDSK+L  KAL AEIKEISEKKR EDD LLA
Sbjct: 631  RTEFNKVWADIYTKNYHRSLDHRSFYFKQQDSKNLSTKALLAEIKEISEKKRGEDDALLA 690

Query: 720  IAAGNRRSIVPHLEFEYSDPDIHEDLYQLIKYSCGEMCTTEQLDKVMKIWTTFLEPMLGV 779
            +AAGNRR+I  ++ F+Y DPD+HEDLYQLIKYSCGEMC+TEQLDKVMK+WT FLEP+ GV
Sbjct: 691  LAAGNRRTISSNMSFDYPDPDLHEDLYQLIKYSCGEMCSTEQLDKVMKVWTEFLEPIFGV 750

Query: 780  PSRPQGAEDTEDVVKAKSHTVKSRAASVGDSDGSPDGDAAAMTSKHSNPSRNGDESIPPE 839
            PSRPQGAED ED VK+ +H  + +  +V     SP   A+   S  SN  R  +ES    
Sbjct: 751  PSRPQGAEDREDAVKSTNHDREDQEDAV-----SPQNGASIANSMRSNGPRKVNESNQVR 805

Query: 840  QSSSSRAWLPNGDHGIKEDVSVEADHNARKSDNFCDSSEQDKVQNNAAMADETSGISKQA 899
            Q+S            + +DV+     +A  S   CD+++ DK+  N    DE +  +KQA
Sbjct: 806  QASE-----------LDKDVTSSKTSDALLS---CDNTQNDKMPKNLTTPDERAE-TKQA 850

Query: 900  STNERLIGTNA-AIAAAADQSNGRSNIENTSGLSVA---------------HSRPGNHIV 943
             + ER   +NA  +     Q NG+      S LSVA               +S P   + 
Sbjct: 851  VSIERAHNSNALPLDGLLPQRNGK-----ISSLSVADEEWYPFLLYSPGLSNSNPKPALT 905

Query: 944  EGGLELRSSNEILPSSEGGECSRQNISTNGVMTEGAKILRYNAESVKQFKIEREEGELSP 1003
             G  EL+      P+   G   R  I  N V+  G     +  E+    K+EREEGELSP
Sbjct: 906  SGTEELK------PNYVNG--PRVEIGDNPVIPNGTVAEWFAGEA----KVEREEGELSP 953

Query: 1004 NGDFEEDNFAVYGESGLEAVHKAKD 1028
             GDFEEDN+AV+GE+ +EA+ K+K+
Sbjct: 954  TGDFEEDNYAVHGENDMEALSKSKE 978


>gi|222617597|gb|EEE53729.1| hypothetical protein OsJ_00078 [Oryza sativa Japonica Group]
          Length = 1418

 Score = 1041 bits (2692), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 586/1058 (55%), Positives = 728/1058 (68%), Gaps = 96/1058 (9%)

Query: 1    MKRSRDEVYMNSQIKRPMISSRGEPSGQTQVV----------------------GGGGGG 38
            MKR+RD+  M SQ+KRP +  R +P+ Q Q +                        GG  
Sbjct: 1    MKRARDDALMGSQLKRPNVG-RSDPTAQPQHMPLGPASAAAPPPQAAAAPPAQPPAGGAT 59

Query: 39   GAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHR 98
              QKLTTNDAL YLKAVKD FQDKREKY++FLEVM+DFK++RIDT GVI RVK LF G+ 
Sbjct: 60   AGQKLTTNDALVYLKAVKDKFQDKREKYEEFLEVMRDFKSERIDTNGVIIRVKTLFNGYP 119

Query: 99   DLILGFNTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDI 158
            +LILGFNTFLPKGY I L  E      KKPV+F EAINFVNKIK RFQ D+HVYK+FLDI
Sbjct: 120  ELILGFNTFLPKGYAIKLQEE------KKPVDFVEAINFVNKIKNRFQHDEHVYKAFLDI 173

Query: 159  LNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRD-R 217
            LNMYRK+NKSI +VY EV  LF DH DLLEEF HFLPD+S       V   R  I RD R
Sbjct: 174  LNMYRKDNKSIQDVYHEVAVLFADHKDLLEEFQHFLPDTS--VPPQAVAPSRPGIRRDDR 231

Query: 218  SSAMPTARQVHVDKKERAMASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERRDD 277
            +S +P A +   +K+++A   HADR+ SVDRPD DH  V+      QRRR  K+R   D 
Sbjct: 232  TSLVPPASRN--EKRDKAHP-HADRE-SVDRPDLDH--VI------QRRR-PKDRHDYDR 278

Query: 278  HRRERERDDRDFENDVNRDFSMQRFPHKRKSARKIEDSTAEPLHQGGEGDENFGMHPVSS 337
              ++ E D +D       D  ++R P      RK+ED T+   H GG   EN G+   S+
Sbjct: 279  GDKDGELDSKDL------DIGLKRKPF----PRKMEDPTSADAHHGGPL-ENHGILGASA 327

Query: 338  S-YDDKNAMKSMFSQELSFCEKVKDKLRDD-YQEFLRCLHLYTKEIITRSELQSLVGDLL 395
            S YD+K+A+KS+++QE  FCEKVK+KL  D YQEFL+CLH+Y++EIITRSEL++LV D+L
Sbjct: 328  SLYDNKDALKSVYTQEFHFCEKVKEKLEHDAYQEFLKCLHIYSQEIITRSELKNLVNDIL 387

Query: 396  GRYPDLMDGFNGFLARCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGV 455
             ++PDLMDGFN FL  CE  +  LA V SK+     GRI   VK E        ER +G 
Sbjct: 388  QQHPDLMDGFNEFLEHCENIDGFLAGVFSKRQT---GRI---VKTE--------ERKEGG 433

Query: 456  KDRDREAREKDRLDKSVAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLL 515
            K  ++E    DR++K  A+  K+   +  ++SSK+KY+ KP+ ELDLSNC+RCTPSYRLL
Sbjct: 434  KGTEKEP---DRIEKVPAY--KEAPSQKPVFSSKEKYIYKPVSELDLSNCQRCTPSYRLL 488

Query: 516  PKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDM 575
            PK+Y +P A  +TELGA VLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDM
Sbjct: 489  PKHYPMPPAGNKTELGASVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDM 548

Query: 576  LLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFTALNLRCIERLYGDHGLDVMDVLR 635
            LLESVN  TKRVEEL+EK+ +N++K D PIR+ +H T LNLRCIERLYGDHGLDVMDVLR
Sbjct: 549  LLESVNAATKRVEELIEKMQDNSLKPDSPIRINEHLTPLNLRCIERLYGDHGLDVMDVLR 608

Query: 636  KNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLG 695
            KNAS+ALPVILTRLKQKQEEW+RCRSDFNKVWAEIY+KNYHKSLDHRSFYFKQQD+K+L 
Sbjct: 609  KNASVALPVILTRLKQKQEEWSRCRSDFNKVWAEIYAKNYHKSLDHRSFYFKQQDTKNLS 668

Query: 696  AKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLIKYSCGE 755
             K+L  EIKEI+EKKRKEDDVLLAIAAGNRR IVP++ F+Y D +IHED+Y++IKYSCGE
Sbjct: 669  TKSLLTEIKEINEKKRKEDDVLLAIAAGNRRPIVPNMSFDYVDSNIHEDMYKIIKYSCGE 728

Query: 756  MC-TTEQLDKVMKIWTTFLEPMLGVPSRPQGAEDTEDVVKAKSHTVKSRAASVGDSDGSP 814
            +C +++QLDKV++IWTTFLEP+LGV  R  GAED  D VK KS T KS  A+VG+ + + 
Sbjct: 729  VCSSSDQLDKVVRIWTTFLEPILGVQPRTHGAEDA-DAVKPKSRTTKSGLATVGEINTT- 786

Query: 815  DGDAAAMTSKHSNPSRNGDESIPPEQSSSSRAWLPNGDHGIKEDVSVEADHNARKSDNFC 874
               AA   +KH +     DE+IP EQ+ SS A + NG     ++   + D  AR+++   
Sbjct: 787  ---AAGAVAKHGH-----DENIPQEQTPSSLARMVNGVATDTQNGFHDVDRTARRAEEPS 838

Query: 875  DSSEQDKVQNNAAMADETSGISKQASTNERLIGTNAAIAAAADQSNGRSNIENTSGLSVA 934
            +++   +VQ  +   +E   +S Q    ER    N  +A      N ++N+E TSG++ +
Sbjct: 839  NTAVNGRVQGASPGTNEIPAVSTQNMPTER-SAENIPVARTEQHGNAKANLEPTSGVNAS 897

Query: 935  H-SRPGNHIVEGGLELRSSNEILPSSEGGECSRQNISTN-GVMTEGAKILRYNAESVKQF 992
              S  GN   +   E R+ NE LPS EGGE  R   + N G  +EG K   +N  S    
Sbjct: 898  RSSHAGN---DTAAEARAGNETLPSVEGGETGRSGSTLNGGGASEGNKGRLFNEASASHN 954

Query: 993  --KIEREEGELSPNGDFEEDNFAVYGESGLEAVHKAKD 1028
              K+EREEGELSPNGDFEEDNFA + +  ++ V KAK+
Sbjct: 955  TPKVEREEGELSPNGDFEEDNFAPFEDGAVDGVSKAKE 992


>gi|242052367|ref|XP_002455329.1| hypothetical protein SORBIDRAFT_03g008490 [Sorghum bicolor]
 gi|241927304|gb|EES00449.1| hypothetical protein SORBIDRAFT_03g008490 [Sorghum bicolor]
          Length = 1441

 Score = 1039 bits (2687), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 598/1054 (56%), Positives = 732/1054 (69%), Gaps = 87/1054 (8%)

Query: 1    MKR-SRDEVYMNSQIKRPMISSRGEPSGQTQ----VVGG--------------------- 34
            MKR +RD+  M SQ+KRP ++ R +PS Q Q    V G                      
Sbjct: 1    MKRGARDDALMGSQLKRPNVA-RSDPSAQPQHNMPVPGSASGAAPPPQAGAAPPAQPQQP 59

Query: 35   -GGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKEL 93
             G     QKLTTNDAL YLKAVKD FQDKREKY++FLEVM+DFK++RIDT GVI RVK L
Sbjct: 60   SGAALTNQKLTTNDALVYLKAVKDKFQDKREKYEEFLEVMRDFKSERIDTNGVIVRVKTL 119

Query: 94   FKGHRDLILGFNTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYK 153
            F G+ +LILGFN FLPKGY I L  E      KKPV+F EAINFVNKIK RFQ D+ VYK
Sbjct: 120  FNGYPELILGFNAFLPKGYAIKLQEE------KKPVDFVEAINFVNKIKNRFQHDEQVYK 173

Query: 154  SFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSI 213
            +FLDILNMYRK+NKSI +VYQEV  LF +H DLLEEF HFLPD+S A       + R  +
Sbjct: 174  AFLDILNMYRKDNKSIQDVYQEVALLFTEHKDLLEEFQHFLPDTSVAPQ---AVASRGGL 230

Query: 214  LR--DRSSAMPTA-RQVHVDKKERAMASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEK 270
            ++  DR S +P A R +H DK++RA  SHADRD SVDRPD +HDR        QRRR +K
Sbjct: 231  VKREDRGSLVPPANRTLHNDKRDRAYLSHADRDFSVDRPDVEHDR--------QRRRLDK 282

Query: 271  ERERR--DDHRRERERDDRDFENDVNRDFSMQRFPHKRKS-ARKIEDSTAEPLHQGGEGD 327
            E+E+R  +  RR+ ER+D+D E+D +RD  + +   KRK   RK+ED+ A   HQGG   
Sbjct: 283  EKEQRKVERDRRDYEREDKDGEHD-SRDLEIGQ--RKRKPFPRKMEDNAAAEAHQGGPS- 338

Query: 328  ENFGMHPVS-SSYDDKNAMKSMFSQELSFCEKVKDKLRDD-YQEFLRCLHLYTKEIITRS 385
            EN G+H VS SSYDDK+A+KS+++ E  FCEKVK+KL  + YQEFL+CLH+Y++EIITRS
Sbjct: 339  ENHGIHSVSASSYDDKDALKSVYTHEFHFCEKVKEKLEHEAYQEFLKCLHIYSQEIITRS 398

Query: 386  ELQSLVGDLLGRYPDLMDGFNGFLARCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDR 445
            EL++LV D+L  YPDLM+GFN FL  CE  +  LA V +K+      R+ K+   E    
Sbjct: 399  ELKNLVNDILQHYPDLMEGFNEFLEHCENIDGFLAGVFNKRPT---ARVVKTEDKEKDRD 455

Query: 446  DRDRERDDGVKDRDREAREKDRLDKSVAFVNKDVGP-KMSMYSSKDKY-LAKPIQELDLS 503
                +RD          +E++RLDK   F +K+    K  M+S K+KY L+KPI ELDLS
Sbjct: 456  RDREDRD--RDREKEREKERERLDKGSTFNSKEGSSHKPPMFSGKEKYNLSKPISELDLS 513

Query: 504  NCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESL 563
            NC+RCTPSYRLLPKNY +P AS RT+LGA VLNDHWVSVTSGSEDYSFKHMRKNQYEESL
Sbjct: 514  NCQRCTPSYRLLPKNYPMPPASNRTDLGASVLNDHWVSVTSGSEDYSFKHMRKNQYEESL 573

Query: 564  FRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFTALNLRCIERLY 623
            FRCEDDRFELDMLLESVN  TKRVEEL+EK+ +N++K + PIR+++H T LNLRCIERLY
Sbjct: 574  FRCEDDRFELDMLLESVNAATKRVEELIEKMQDNSVKPESPIRIDEHLTPLNLRCIERLY 633

Query: 624  GDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRS 683
            GDHGLDVMDVLRKNAS+ALPVILTRLKQKQEEW+RCRSDFNKVWAEIY+KNYHKSLDHRS
Sbjct: 634  GDHGLDVMDVLRKNASVALPVILTRLKQKQEEWSRCRSDFNKVWAEIYAKNYHKSLDHRS 693

Query: 684  FYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHE 743
            FYFKQQD+K+L  K+L  EIKEI+EKKRKEDDVLLAIAAGNRR IVP++ FEY D +IHE
Sbjct: 694  FYFKQQDTKNLSTKSLLTEIKEINEKKRKEDDVLLAIAAGNRRPIVPNMSFEYVDSEIHE 753

Query: 744  DLYQLIKYSCGEMC-TTEQLDKVMKIWTTFLEPMLGVPSRPQGAEDTEDVVKAKSHTVKS 802
            DL+++IKYSCGE+C +++QLDKVM+IWTTFLEP+LGV  R  G+ED  D+VK KS T K 
Sbjct: 754  DLHKIIKYSCGEVCNSSDQLDKVMRIWTTFLEPILGV-QRKHGSEDP-DLVKPKSRTTKL 811

Query: 803  RAASVGDSDGSPDGDAAAMTSKHSNPSRNGDESIPPEQSSSSRAWLPNGDHGIKEDVSVE 862
              A+ G+S+       A + SK +    NGDES   EQ  SSRA L NG     ++   +
Sbjct: 812  GLANAGESN-----TGAGIVSKQN----NGDES---EQGLSSRARLANGVAADTQNGFHD 859

Query: 863  ADHNARKSDNFCDSSEQDKVQNNAAMADETSGISKQASTNERLIGTNAAIAAAADQSNGR 922
            AD  AR+ +   ++    +V + A  ADET  +S Q   +      NAA+         +
Sbjct: 860  ADRTARRGEEPSNAILNGRV-HGAISADETPSLSAQNIASTERAAENAAVVRTEQH---K 915

Query: 923  SNIENTSGLSVAHSRPGNHIVEGGLELRSSNEILPSSEGGECSRQNISTNGVMTEGAKIL 982
            +N E T G++   SR  +  VE   E ++ NE L S+EGGE  R   S NG  +EG K  
Sbjct: 916  ANSELTPGVNA--SRSSHDAVEAAGEGKTGNETLLSAEGGETGRLGPSLNGT-SEGIKGR 972

Query: 983  RYNAESVKQF-KIEREEGELSPNGDFEEDNFAVY 1015
              N  SV    K+EREEGELSPNGDFEED+F  +
Sbjct: 973  LNNDGSVPHTSKVEREEGELSPNGDFEEDHFVPF 1006


>gi|357128064|ref|XP_003565696.1| PREDICTED: paired amphipathic helix protein Sin3-like 3-like
            [Brachypodium distachyon]
          Length = 1439

 Score = 1034 bits (2673), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 580/1066 (54%), Positives = 717/1066 (67%), Gaps = 87/1066 (8%)

Query: 1    MKRSRDEVYMNSQ------IKRPMISSRGEPSGQTQVVGGGG------------------ 36
            MKR+R+E  + SQ      +KRP   +R +P+   Q +   G                  
Sbjct: 1    MKRAREEALVGSQQQQQQQLKRPN-PARSDPTAPPQAMPVSGSASAAAAPPPQAAAAAPA 59

Query: 37   -------GGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIAR 89
                    G  QKLTTNDAL YLKAVKD FQD R KY++FLEVM+DFK++RIDT GVI R
Sbjct: 60   QPSSSLAAGAGQKLTTNDALVYLKAVKDKFQDNRAKYEEFLEVMRDFKSERIDTNGVIIR 119

Query: 90   VKELFKGHRDLILGFNTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDD 149
            VK LF G+ +LILGFNTFLPKG+ I L  E      KKPV+F EAINFVNKIKTRFQ D+
Sbjct: 120  VKTLFNGYPELILGFNTFLPKGFAIRLQEE------KKPVDFMEAINFVNKIKTRFQRDE 173

Query: 150  HVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSG 209
            HVYKSFLDILNMYRK+NKSI +VYQEV  LF DH DLLEEF HFLPD+S +      P G
Sbjct: 174  HVYKSFLDILNMYRKDNKSIQDVYQEVAVLFSDHKDLLEEFQHFLPDTSVSPQAVTAPRG 233

Query: 210  RNSILRDRSSAMPTARQVHVDKKERAMASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGE 269
                  D+++ MP    V  ++K RA  SHADRD +VDRPD +HDR        QRR+ E
Sbjct: 234  ALVNRDDKTTVMPP---VSRNEKPRAYPSHADRDFTVDRPDVEHDR--------QRRQKE 282

Query: 270  KERERRDDHRRERERDDRDFENDVNRDFSMQRFPHKRKSARKIEDSTAEPLHQGGEGDEN 329
            KER+   D +R+ ERD++D E+D       QR   KR+       + AE  HQGG   EN
Sbjct: 283  KERKAERD-KRDYERDEKDGEHDSKEPDMGQR---KRRPFTSANPTGAE-THQGG-FPEN 336

Query: 330  FGMHPVS-SSYDDKNAMKSMFSQELSFCEKVKDKLRDD-YQEFLRCLHLYTKEIITRSEL 387
             G++  S SSYD+ + +KS++ QE  FC+KVK+KL  D YQEFL+C+H+Y++EIITRSEL
Sbjct: 337  HGINTASASSYDNNDVLKSVYPQEFQFCDKVKEKLEHDAYQEFLKCVHIYSQEIITRSEL 396

Query: 388  QSLVGDLLGRYPDLMDGFNGFLARCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDR 447
            ++LV D+L  YPDLM+GFN FL  CE  +  LA V SKK     GR+   VK ED++RD+
Sbjct: 397  KNLVSDILQHYPDLMNGFNEFLEHCENIDGFLAGVFSKK---QPGRL---VKTEDKERDK 450

Query: 448  DRERDDGVKDRDREARE-KDRLDKSVAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCE 506
            + ER+D  +DRD+E  + ++RL       N   GP       K+KYL KPI ELDLSNC+
Sbjct: 451  EHEREDRDRDRDKEREKGRERL-------NPKEGPSQKPSIIKEKYLCKPISELDLSNCQ 503

Query: 507  RCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRC 566
            RCTPSYRLLPKNY +P AS RT+LGA VLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRC
Sbjct: 504  RCTPSYRLLPKNYPMPPASNRTDLGASVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRC 563

Query: 567  EDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFTALNLRCIERLYGDH 626
            EDDRFELDMLLESVN  TKRVEEL+EK+ +N++K D PIR+++H T LNLRC+ERLYGDH
Sbjct: 564  EDDRFELDMLLESVNAATKRVEELIEKMQDNSVKPDSPIRIDEHLTPLNLRCVERLYGDH 623

Query: 627  GLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYF 686
            GLDVMDVLR+NAS+ALPVILTRLKQKQEEW+RCRSDFNKVWAEIY+KNYHKSLDHRSFYF
Sbjct: 624  GLDVMDVLRRNASVALPVILTRLKQKQEEWSRCRSDFNKVWAEIYAKNYHKSLDHRSFYF 683

Query: 687  KQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLY 746
            KQQDSK+L  K+L  EIKEI+EKKRKEDDVL+AIAAGNRR IVP++ FE+ D +IHEDLY
Sbjct: 684  KQQDSKNLSTKSLLTEIKEINEKKRKEDDVLIAIAAGNRRPIVPNMSFEFVDLNIHEDLY 743

Query: 747  QLIKYSCGEMC-TTEQLDKVMKIWTTFLEPMLGVPSRPQGAEDTEDVVKAKSHTVKSRAA 805
            +++KYSCGE+C +++QLDKVM+IWTTF+EP+LGVP R  G  D  D +K K+   KS   
Sbjct: 744  KIVKYSCGEVCSSSDQLDKVMRIWTTFMEPILGVPPRSNGTVDV-DPIKPKNGITKSSIV 802

Query: 806  SVGDSDGSPDGDAAAMTSKHSNPSRNGDESIPPEQSSSSRAWLPNGDHGIKEDVSVEADH 865
            +VG+S+ +P G A            +GDES+P EQ+ S+   L  G     ++   +AD 
Sbjct: 803  TVGESNSAPAGTATKQG--------HGDESMPQEQAPSTVVRLVKGVAADSQNGFHDADR 854

Query: 866  NARKSDNFCDSSEQDKVQNNAAMADETSGISKQASTNERLIGTNAAIAAAADQSNGRSNI 925
             AR      +++   +VQ  A+   E S ++ Q  + ER    N ++      S+ + N+
Sbjct: 855  TARAGGELPNAALNGRVQAGASATVEISAVNTQNMSTER-SAENVSVPRTEQHSHIKGNL 913

Query: 926  ENTSGLSVAHSRPGNHIVEGGLELRSSNEILPSSEGGECSRQNISTNGVMT-EGAKILRY 984
            + TSG + + S         G   R+  E LPS EGGE  R   S NG  T EG K   +
Sbjct: 914  DTTSGANASRSSHAGAGSAAG--PRAGKEALPSVEGGETGRSVSSLNGGSTSEGNKGGLF 971

Query: 985  NAESVKQ--FKIEREEGELSPNGDFEEDNFAVYGESGLEAVHKAKD 1028
            N  +      KIEREEGELSPNGDFEEDNF    +   E   K K+
Sbjct: 972  NEATASHNISKIEREEGELSPNGDFEEDNFVPLEDGAAEGTSKTKE 1017


>gi|414876647|tpg|DAA53778.1| TPA: hypothetical protein ZEAMMB73_825131 [Zea mays]
          Length = 1435

 Score = 1016 bits (2628), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 602/1053 (57%), Positives = 742/1053 (70%), Gaps = 89/1053 (8%)

Query: 1    MKR-SRDEVYMNSQIKRPMISSRGEPSGQTQVVG-------------------------G 34
            MKR +RD+  M SQ+KR  +  R +PS Q Q +                           
Sbjct: 1    MKRGTRDDALMGSQLKRSNVV-RSDPSAQPQHMSVPGSASAAAPPPQAGAAPPAQPQQPS 59

Query: 35   GGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELF 94
            G     QKLTTNDAL YLKAVKD FQDKREKY++FLEVM+DFK++RIDT GVI RVK LF
Sbjct: 60   GAAFTNQKLTTNDALVYLKAVKDKFQDKREKYEEFLEVMRDFKSERIDTNGVIVRVKTLF 119

Query: 95   KGHRDLILGFNTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKS 154
             G+ +LILGFN FLPKGY I L  E      KKPV+F EAINFVNKIK RFQ D+ VYK+
Sbjct: 120  NGYPELILGFNAFLPKGYAIKLQEE------KKPVDFVEAINFVNKIKNRFQHDEQVYKA 173

Query: 155  FLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSIL 214
            FLDILNMYRK+NKSI +VY EV  LF+DH DLLEEF HFLPD+S A     V S    + 
Sbjct: 174  FLDILNMYRKDNKSIQDVYHEVAMLFKDHKDLLEEFQHFLPDTSVAPQA--VASKGGLVK 231

Query: 215  R-DRSSAMPTARQV-HVDKKERAMASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKER 272
            R DRSS +P A ++ H DK++R   SHADRD SVDRPD +HDR        QRRR +K++
Sbjct: 232  REDRSSLVPPANKILHNDKRDRVYLSHADRDFSVDRPDVEHDR--------QRRRLDKDK 283

Query: 273  ERRDDH-RRERERDDRDFENDVNRDFSMQRFPHKRKS-ARKIEDSTAEPLHQGGEGDENF 330
            ER+ +  RR+ ER+D+D E+D +RD  + +   KRK  +R IED+     HQGG   EN 
Sbjct: 284  ERKVERDRRDYEREDKDGEHD-SRDLELGQ--RKRKPFSRNIEDNVGAETHQGGPS-ENH 339

Query: 331  GMHPVS-SSYDDKNAMKSMFSQELSFCEKVKDKLRDD-YQEFLRCLHLYTKEIITRSELQ 388
            G+H VS SSYDDK+A+KS+++ E  FCEKVK+KL  + YQEFL+CLH+Y++EIITRSEL+
Sbjct: 340  GIHSVSASSYDDKDALKSVYTHEFHFCEKVKEKLEHEAYQEFLKCLHIYSQEIITRSELK 399

Query: 389  SLVGDLLGRYPDLMDGFNGFLARCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRD 448
            +LV D+L  YPDLM+GFN FL  CE  +  LA V +K+         ++VK ED+++DRD
Sbjct: 400  NLVNDILQHYPDLMEGFNEFLEHCENIDGFLAGVFNKRP------STRAVKTEDKEKDRD 453

Query: 449  RERDDGVKDRDREAREKDR-LDKSVAFVNKDVGP-KMSMYSSKDKY-LAKPIQELDLSNC 505
            R+R+D  +DR++E  ++   LDK   F +K+    K SM+S K+KY L+KPI ELDLSNC
Sbjct: 454  RDREDKDRDREKEREKERERLDKGSTFNSKEGSSHKPSMFSGKEKYNLSKPISELDLSNC 513

Query: 506  ERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFR 565
            +RCTPSYRLLPKNY +P AS RT+LGA VLNDHWVSVTSGSEDYSFKHMRKNQYEESLFR
Sbjct: 514  QRCTPSYRLLPKNYPMPPASNRTDLGASVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFR 573

Query: 566  CEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFTALNLRCIERLYGD 625
            CEDDRFELDMLLESVN  TKRVEEL+EK+ +N++K + PIR+++H T LNLRCIERLYGD
Sbjct: 574  CEDDRFELDMLLESVNAATKRVEELIEKMQDNSVKPESPIRIDEHLTPLNLRCIERLYGD 633

Query: 626  HGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFY 685
            HGLDVMDVLRKNAS+ALPVILTRLKQKQEEW+RCRSDFNKVWAEIY+KNYHKSLDHRSFY
Sbjct: 634  HGLDVMDVLRKNASVALPVILTRLKQKQEEWSRCRSDFNKVWAEIYAKNYHKSLDHRSFY 693

Query: 686  FKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDL 745
            FKQQD+K+L  K+L  EIKEI+EKKRKEDDVLLAIAAGNRR IVP++ FEY D +IHEDL
Sbjct: 694  FKQQDTKNLSTKSLLTEIKEINEKKRKEDDVLLAIAAGNRRPIVPNMSFEYIDSEIHEDL 753

Query: 746  YQLIKYSCGEMC-TTEQLDKVMKIWTTFLEPMLGVPSRPQGAEDTEDVVKAKSHTVKSRA 804
            +++IKYSC E+C +++QLDKVM++WTTFLEP+LGV  +  G+ED  D+VK KS T K   
Sbjct: 754  HKIIKYSCAEVCNSSDQLDKVMRVWTTFLEPVLGVQQK-HGSEDP-DLVKTKSRTTKLGL 811

Query: 805  ASVGDSDGSPDGDAAAMTSKHSNPSRNGDESIPPEQSSSSRAWLPNGDHGIKEDVSVEAD 864
            A+V +S+       A + SK S    NGDES   EQ  SSRA L NG     ++   +AD
Sbjct: 812  ANVRESN-----TIAGIVSKQS----NGDES---EQGPSSRARLANGVAAGTQNGFHDAD 859

Query: 865  HNARKSDNFCDSSEQDKVQNNAAMADET-SGISKQASTNERLIGTNAAIAAAADQSNGRS 923
              ARK +   ++    +V   A  ADET S I++  ++ ER     A  AAA      ++
Sbjct: 860  RIARKGEEPSNAILNGRVH-GAVSADETLSLITQNIASTER----PAENAAAVRTEQHKA 914

Query: 924  NIENTSGLSVAHSRPGNHIVEGGLELRSSNEILPSSEGGECSRQNISTNGVMTEGAKILR 983
            N+  T G++   SR  +  VE   E ++ NE L S+EGGE  R   S NG  +EG K   
Sbjct: 915  NLVLTPGMNA--SRSSHDAVEVAGEGKTGNETLLSAEGGE--RLGPSLNGT-SEGIKGRL 969

Query: 984  YNAESVKQF-KIEREEGELSPNGDFEEDNFAVY 1015
             N  SV    K+EREEGELSPNGDFEED+F  +
Sbjct: 970  NNDGSVPHTSKVEREEGELSPNGDFEEDHFVPF 1002


>gi|255552758|ref|XP_002517422.1| conserved hypothetical protein [Ricinus communis]
 gi|223543433|gb|EEF44964.1| conserved hypothetical protein [Ricinus communis]
          Length = 1289

 Score = 1013 bits (2620), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 539/985 (54%), Positives = 686/985 (69%), Gaps = 81/985 (8%)

Query: 58   IFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLP 117
            +FQD+REKYD FLEVMKDFKAQR DTAGVIARVK+LFKGH +LI GFN FLPKGYEITL 
Sbjct: 1    MFQDQREKYDIFLEVMKDFKAQRTDTAGVIARVKQLFKGHNNLIFGFNLFLPKGYEITL- 59

Query: 118  LEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVE 177
             ++++ PPKK VEFEEAINFVNKIK RF  D+HVYKSFLDILNMYRKE+K I EVY EV 
Sbjct: 60   -DEDEAPPKKTVEFEEAINFVNKIKKRFYNDEHVYKSFLDILNMYRKEHKDINEVYSEVA 118

Query: 178  ALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILR--DRSSAMPTARQVHVDK---K 232
            ALF+DH DLL+EF  FLPD+SG       P GRN + R  +R S  PT RQ+HVDK   +
Sbjct: 119  ALFEDHQDLLDEFRRFLPDTSGPPMTQNAPYGRNPLQRYNERISTAPTLRQMHVDKQRRR 178

Query: 233  ERAMASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERRDDHRRERERDDRDFEND 292
            +R + SH +RDLSVDRP+ D D+ + K  K+QR+R EKE   R +   +        E+D
Sbjct: 179  DRIVTSHGERDLSVDRPELDEDKTMAKMHKEQRKRAEKENRDRRNRDDDDREP----EHD 234

Query: 293  VNRDFSMQRFPHKRKSARKIEDSTAEPLHQGGEGDENFGMHPVSSSYDDKNAMKSMFSQE 352
             N+DFS+QRFP KRKS RK            GEG   FGM+   SSYDDK+ +KS+++Q 
Sbjct: 235  SNKDFSLQRFPDKRKSGRK------------GEG---FGMNSNISSYDDKDNLKSVYNQG 279

Query: 353  LSFCEKVKDKL--RDDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLA 410
              FCEKVK+KL   DDYQ FL+CL++Y+  II +++LQ+LV DLLG+YPDLM+ FN F  
Sbjct: 280  FIFCEKVKEKLGSSDDYQAFLKCLNIYSNGIIKKNDLQNLVADLLGKYPDLMEEFNDFFE 339

Query: 411  RCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRLDK 470
            R E  +  LA VMSKKSL ++G   +S+KVED+D+++ RE D         A+EK+R   
Sbjct: 340  RRENIDGFLAGVMSKKSLGSDGHASRSLKVEDKDKEQKRELD--------VAKEKERY-- 389

Query: 471  SVAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTEL 530
                              ++KY+AK IQELDLSNC+RCTPSYRLLP +Y IPSASQR+EL
Sbjct: 390  ------------------REKYMAKSIQELDLSNCQRCTPSYRLLPDDYPIPSASQRSEL 431

Query: 531  GAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEEL 590
            GA+VLNDHWVSVTSGSEDYSFKHMR+NQYEESLFRCEDDRFELDMLLESV  T KR EEL
Sbjct: 432  GAQVLNDHWVSVTSGSEDYSFKHMRRNQYEESLFRCEDDRFELDMLLESVTSTAKRAEEL 491

Query: 591  LEKINNNTIKTDGPIRVEDHFTALNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLK 650
            L  IN N I  + PI ++DHFTALNLRCIERLYGDHGLDVMD+LRKN +LALPVILTRLK
Sbjct: 492  LNSINENKI--EAPINIDDHFTALNLRCIERLYGDHGLDVMDILRKNPTLALPVILTRLK 549

Query: 651  QKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKK 710
            QKQEEW RCR+DFNKVWAEIYSKN++KSLDHRSFYFKQQDSK+L  ++L +EIKE+ EK+
Sbjct: 550  QKQEEWMRCRADFNKVWAEIYSKNHYKSLDHRSFYFKQQDSKNLSTRSLVSEIKELKEKQ 609

Query: 711  RKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLIKYSCGEMCTT-EQLDKVMKIW 769
            +KEDD+LLA AAGNR+ +VPHLE+EYSD  IHEDLY+L++YSC E+C+T EQL+KV+++W
Sbjct: 610  QKEDDILLAFAAGNRQPVVPHLEYEYSDMSIHEDLYKLVQYSCEEICSTKEQLNKVLRLW 669

Query: 770  TTFLEPMLGVPSRPQGAEDTEDVVKAKSHTVKSRAASVGDSDGSPDGDAAAMTSKHSNPS 829
            TTFLEP+ G+ SR    E+ E   +  SH +    +++ ++   P     + +   S   
Sbjct: 670  TTFLEPLFGIVSRSNAMENPEVESETGSHLINCITSNIAENGADP---TISNSKPRSAII 726

Query: 830  RNGDESIPPEQSSSSRAWLPNGDHGIKEDVSVEADHNARKSDNFCDSSEQDKVQNNAAMA 889
             +G+ SI P  +S     L NGD  +  D  VE +H   K D   +S   ++   +  + 
Sbjct: 727  ADGNTSIEP--ASCCGPSLANGD-SLARDSLVEVNH-VTKDDLTSNSFSLEREHKDTDVI 782

Query: 890  DETSGISKQASTNERLIGTNAAIAAAADQSNGRS-------NIENTSGLSVAHSRPGNHI 942
            D   G + Q ++ + +  +   I   A+QS+GR+       +    S L+ A S   +H 
Sbjct: 783  DRIPGFNTQVTSGKGVPDSKTLIMVGAEQSHGRTSASGVGGSGSTLSNLNAAASE--DHK 840

Query: 943  VEGGLELRSSNEILPSSEGGECSRQNISTNGVMTEGAKILRYNAESVKQFKIEREEGELS 1002
             + G+      +I PSS+GG  ++  +  NG + +G K  RY  ES++  K E+EEGELS
Sbjct: 841  PKAGI------DIAPSSDGGIGAKSVLPANGALVDGNKSSRYLEESIELSKTEKEEGELS 894

Query: 1003 PNGDFEEDNFAVYGESGLEAVHKAK 1027
            PNGDFEE+NFA YG++ ++++ K K
Sbjct: 895  PNGDFEEENFAAYGDNAMQSMPKGK 919



 Score = 40.0 bits (92), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 18/63 (28%), Positives = 34/63 (53%)

Query: 47  DALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNT 106
           +A+ ++  +K  F +    Y  FL+++  ++ +  D   V + V  LF+ H+DL+  F  
Sbjct: 74  EAINFVNKIKKRFYNDEHVYKSFLDILNMYRKEHKDINEVYSEVAALFEDHQDLLDEFRR 133

Query: 107 FLP 109
           FLP
Sbjct: 134 FLP 136


>gi|356550937|ref|XP_003543838.1| PREDICTED: paired amphipathic helix protein Sin3-like 2-like [Glycine
            max]
          Length = 1371

 Score = 1011 bits (2614), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 552/1049 (52%), Positives = 707/1049 (67%), Gaps = 107/1049 (10%)

Query: 1    MKRSRDEVYMNSQIKRPMISSRGEPSGQTQV-------------VGGGGGGGAQKLTTND 47
            MKR+RD++Y  SQ KRP  SSR +  GQ QV             V GGG   +QKLTTND
Sbjct: 1    MKRARDDMYPASQFKRPFASSRADSYGQNQVPGSGGGGGGGNGGVVGGGANTSQKLTTND 60

Query: 48   ALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTF 107
            AL+YLK VKD+FQD+REKYD FLEVMKDFKAQR DTAGVI RVKELFKGH +LI GFNTF
Sbjct: 61   ALSYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVIKRVKELFKGHNNLIFGFNTF 120

Query: 108  LPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENK 167
            LPKGYEIT  L++++ PPKK VEFEEAI+FVNKIK RFQ D+ VYKSFLDILNMYRKE+K
Sbjct: 121  LPKGYEIT--LDEDEAPPKKTVEFEEAISFVNKIKKRFQNDELVYKSFLDILNMYRKEHK 178

Query: 168  SITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILR--DRSSAMPTAR 225
             I EVY EV  LF+DH DLLEEFT FLPD+S A S  + P  RNS+ R  +R S  P  R
Sbjct: 179  DIGEVYSEVATLFKDHRDLLEEFTRFLPDTSAAPSTQHAPYIRNSLHRFNERGSMAPMIR 238

Query: 226  QVHVDK----KERAMASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERRDDHRRE 281
            Q+  DK    ++R  +   D D+S +RP+ D D+ ++   K+QR+R  +E       RR 
Sbjct: 239  QMPADKQRYRRDRLPSHDRDHDMSAERPELDDDKTMMNIHKEQRKRESRE-------RRM 291

Query: 282  RERDDRDFENDVNRDFSMQRFPHKRKSARKIEDSTAEPLHQGGEGDENFGMHPVSSSYDD 341
            R++D+R+ + D NRD ++QRFP K+KS +K E                            
Sbjct: 292  RDQDEREHDLDNNRDLNLQRFPDKKKSVKKAE---------------------------- 323

Query: 342  KNAMKSMFSQELSFCEKVKDKL--RDDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYP 399
                  M+SQ  SFCEKVK+KL   DDYQ FL+CLH+++  II R++LQ+LV DLLG++ 
Sbjct: 324  -----GMYSQAFSFCEKVKEKLSSSDDYQTFLKCLHIFSNGIIKRNDLQNLVTDLLGKHS 378

Query: 400  DLMDGFNGFLARCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRD 459
            DLMD FN FL RCE  +  LA VMSKKSL  +  + +S K+ED+D++  R+ D       
Sbjct: 379  DLMDEFNDFLERCENIDGFLAGVMSKKSLSTDAHLSRSSKLEDKDKEHKRDMDG------ 432

Query: 460  REAREKDRLDKSVAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNY 519
              A+EK+R                     ++KY+ K IQELDLS+C+RCTPSYRLLP +Y
Sbjct: 433  --AKEKERY--------------------REKYMGKSIQELDLSDCKRCTPSYRLLPADY 470

Query: 520  LIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLES 579
             IP+ASQR+ELGA+VLNDHWVSVTSGSEDYSFKHMR+NQYEESLFRCEDDR+ELDMLLES
Sbjct: 471  PIPTASQRSELGAQVLNDHWVSVTSGSEDYSFKHMRRNQYEESLFRCEDDRYELDMLLES 530

Query: 580  VNVTTKRVEELLEKINNNTIKTDGPIRVEDHFTALNLRCIERLYGDHGLDVMDVLRKNAS 639
            V+   K+ EEL   IN N I  +   R+EDHFT LNLRCIERLYGDHGLDV+D+LRKN +
Sbjct: 531  VSSAAKKAEELYNNINENKIGMETLNRIEDHFTVLNLRCIERLYGDHGLDVIDILRKNPT 590

Query: 640  LALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKAL 699
             ALPVILTRLKQKQEEW++CRSDFNKVWAEIY+KN++KSLDHRSFYFKQQDSK+L  K+L
Sbjct: 591  HALPVILTRLKQKQEEWSKCRSDFNKVWAEIYAKNHYKSLDHRSFYFKQQDSKNLSTKSL 650

Query: 700  SAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLIKYSCGEMCTT 759
              EIKEI EK++KEDD++ +IAAGN++ ++PHLEFEYSD  IHEDLY+L+ YSC E+ ++
Sbjct: 651  VTEIKEIKEKQQKEDDIIQSIAAGNKQPLIPHLEFEYSDVGIHEDLYKLVCYSCEELFSS 710

Query: 760  -EQLDKVMKIWTTFLEPMLGVPSRPQGAEDTEDVVKAKSHTVKSRAASVGDSDGSPDGDA 818
             E L+K+M++W+TFLEPMLGVPS+  G E  ED  +   H V++  A     DGSP GD+
Sbjct: 711  KELLNKIMRLWSTFLEPMLGVPSQSHGTERAED--RKTGHNVRNFGAPNIGGDGSPRGDS 768

Query: 819  AAMTSKHSNPSRNGDESIPPEQSSSSRAWLPNGDHGIKEDVSVEADHNARKSDNFCDSSE 878
              M S+     +N  +    E  +  R  + + D   KE+ SV  +  +R      D   
Sbjct: 769  LLMNSRVPKSDKNEADGRVTEVKNVHRTTVASND---KENGSVGGELVSR------DDPL 819

Query: 879  QDKVQNNAAMADETSGISKQASTNERLIGTNAAIAAAADQSNGRSNIENTSGLSVAHSRP 938
             DK Q N    D+ SG SKQ +++E+    N +IA   + S  R+N++ + G ++  SRP
Sbjct: 820  MDKGQKNVEYNDKASGFSKQFTSDEQGAKNNVSIAIRGENSLNRTNLDVSPGRALTPSRP 879

Query: 939  GNHIVEGGLELRSSNEILPSSEGGECSRQNISTNGVMTEGAKILRYNAESVKQFKIEREE 998
             +  V+  +  +S     PS EG + +      NGV++E +K+  ++ ESV   KIE+EE
Sbjct: 880  TD--VDDSVS-KSQGVNAPSVEGCDMATPVPVANGVLSESSKVKTHD-ESVGPCKIEKEE 935

Query: 999  GELSPNGDFEEDNFAVYGESGLEAVHKAK 1027
            GELSPNGD EEDN   YG+S ++++ K+K
Sbjct: 936  GELSPNGDSEEDNIVAYGDSNVQSMAKSK 964


>gi|357130191|ref|XP_003566734.1| PREDICTED: paired amphipathic helix protein Sin3-like 4-like
            [Brachypodium distachyon]
          Length = 1356

 Score = 1004 bits (2596), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 545/998 (54%), Positives = 681/998 (68%), Gaps = 78/998 (7%)

Query: 40   AQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRD 99
             QKLTTNDAL YLKAVKD FQD R KY++FLEVM+DFK+ RIDTAGVI RVK LF G+ +
Sbjct: 18   GQKLTTNDALVYLKAVKDQFQDNRAKYEEFLEVMRDFKSARIDTAGVIIRVKTLFNGYPE 77

Query: 100  LILGFNTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDIL 159
            LILGFNTFLPKGY I       Q   KKPV+F EAI+FVNKIK+RFQ +DHVYK+FL IL
Sbjct: 78   LILGFNTFLPKGYAIK-----SQDLEKKPVDFMEAISFVNKIKSRFQQEDHVYKAFLGIL 132

Query: 160  NMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSS 219
            NMYR  NKSI +VY+EV  LF DH DLLEEF HFLPD+S A  +  VP G +    DRS 
Sbjct: 133  NMYRMHNKSIQDVYEEVATLFHDHSDLLEEFKHFLPDTSAAPQVLTVPRGVSVKQGDRSP 192

Query: 220  AMPTARQVHVDKKERAMASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKER-----ER 274
             MP+AR +H  K+ER   S ADRD+SVDRPD +HD         +RRR EKE+       
Sbjct: 193  IMPSARNIHNIKRERPHPSTADRDISVDRPDLEHD--------PERRRIEKEKGRKIDRD 244

Query: 275  RDDHRRERERDDRDFENDVNRDFSMQRFPHKRKSARKIEDSTAEPLHQGGEGDENFGMHP 334
            R D+ ++ E D +D +             HKRK   K  + T    HQG           
Sbjct: 245  RRDYDKDGEYDSKDLDGG----------QHKRKPFPKKPEGTCAETHQG----------- 283

Query: 335  VSSSYDDKNAMKSMFSQELSFCEKVKDKLRDD-YQEFLRCLHLYTKEIITRSELQSLVGD 393
                         ++ QE  FCEKVK+KL  + YQEFL+CLH+Y++EIITRSEL++LV D
Sbjct: 284  -------------VYPQEFHFCEKVKEKLEPEAYQEFLKCLHIYSQEIITRSELKNLVTD 330

Query: 394  LLGRYPDLMDGFNGFLARCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDD 453
            +L RYPDLM+GF+ FL  CE  +  L  V++K + +N+G+ P++VK  +++RD+ R+ +D
Sbjct: 331  ILQRYPDLMNGFSEFLEHCETIDGFLDGVVNKSNFFNKGQTPRTVKTVEKERDKGRDGED 390

Query: 454  GVKDRDREA-REKDRLDKSVAFVNKDVGP-KMSMYSSKDKYLAKPIQELDLSNCERCTPS 511
              +D ++ + +E++RL+K  A  +K+    K + +SSK+KYL KPI ELDLSNC+RCTPS
Sbjct: 391  RERDSEKLSEKERERLEKGSALNSKETATHKAAAFSSKEKYLCKPISELDLSNCQRCTPS 450

Query: 512  YRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRF 571
            YRLLPKNY +P AS RT+LG  VLND WVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRF
Sbjct: 451  YRLLPKNYPMPPASCRTDLGVSVLNDLWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRF 510

Query: 572  ELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFTALNLRCIERLYGDHGLDVM 631
            ELDMLLESVNV  KRVEEL++K+ +N IK D PIR+++H T+LNLRCIERLYGDHGLDVM
Sbjct: 511  ELDMLLESVNVAIKRVEELIQKMQDNLIKPDSPIRIDEHLTSLNLRCIERLYGDHGLDVM 570

Query: 632  DVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDS 691
            DVLRKNAS+ALPVILTRLKQKQEEW+RCRSDFNKVWAEIY+KNYHKSLDHRSFYFKQQD+
Sbjct: 571  DVLRKNASVALPVILTRLKQKQEEWSRCRSDFNKVWAEIYAKNYHKSLDHRSFYFKQQDT 630

Query: 692  KSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLIKY 751
            K+L  KAL  EIKEI+EKKRKEDDVLLAIAAGNRR IVP++ FEY DP+IHEDLYQ+IKY
Sbjct: 631  KNLSTKALLVEIKEINEKKRKEDDVLLAIAAGNRRPIVPNMSFEYVDPEIHEDLYQIIKY 690

Query: 752  SCGEMC-TTEQLDKVMKIWTTFLEPMLGVPSRPQGAEDTEDVVKAKSHTVKSRAASVGDS 810
            SCGE+C +++Q+DKVM+ WTTFLEP+LGV  R  G ED   VVK KS T  S  ASVG+S
Sbjct: 691  SCGEVCSSSDQVDKVMRTWTTFLEPILGVQPRAHGVEDG-GVVKPKSRTPTSGLASVGES 749

Query: 811  DGSPDGDAAAMTSKHSNPSRNGDESIPPEQSSSSRAWLPNGDHGIKEDVSVEADHNARKS 870
            + +      A+         NGDESIP EQ+ SS + + NG     ++   +AD +  + 
Sbjct: 750  NNATTNGGVAVKQA------NGDESIPKEQAQSSHSLVVNGVTEDDQNGFHDADRSVHRG 803

Query: 871  DNFCDSSEQDKVQNNAAMADETSGISKQASTNERLIGTNAAIAAAADQSNGRSNIENTSG 930
            +   ++S   + QN     DE   ++ Q  + ER +       +  +Q+  R+N++ TSG
Sbjct: 804  EGPSNTSLHGRAQN----TDEMLAVTAQNISTERSVENTH--LSRTEQNQRRTNMDLTSG 857

Query: 931  LSVAHSRPGNHIVEGGLELRSSNEILPSSEGGECSRQNISTNGVMTEGAKILRYNAESVK 990
             + + S       E  +E    +E +PS   GE  R       +  E  K+    A S  
Sbjct: 858  TNSSRSNFAGG--EVAVEAMGGSETIPSIGRGETGR----PGSLSREENKVY---AASHN 908

Query: 991  QFKIEREEGELSPNGDFEEDNFAVYGESGLEAVHKAKD 1028
              K+EREEGELSPNGDFEE+NF   G   ++   K K+
Sbjct: 909  NSKVEREEGELSPNGDFEEENFGPLGNVAVDGASKPKE 946


>gi|356573426|ref|XP_003554862.1| PREDICTED: paired amphipathic helix protein Sin3-like 2-like [Glycine
            max]
          Length = 1383

 Score = 1004 bits (2596), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 549/1054 (52%), Positives = 705/1054 (66%), Gaps = 110/1054 (10%)

Query: 1    MKRSRDEVYMNSQIKRPMISSRGEPSGQTQV-------------------VGGGGGGGAQ 41
            MKR+RD++Y  SQ KRP  SSR +  GQ QV                     GGG   +Q
Sbjct: 1    MKRARDDMYPASQFKRPFASSRADSYGQNQVPGSGGGGGGGGGGGSGNGGGVGGGANASQ 60

Query: 42   KLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLI 101
            KLTTNDAL+YLK VKD+FQD+REKYD FLEVMKDFKAQR DTAGVI RVKELFKGH +LI
Sbjct: 61   KLTTNDALSYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVIKRVKELFKGHNNLI 120

Query: 102  LGFNTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNM 161
             GFNTFLPKGYEITL  ++++ PPKK VEFEEAI+FVNKIK RF  D+HVYKSFLDILNM
Sbjct: 121  FGFNTFLPKGYEITL--DEDEAPPKKTVEFEEAISFVNKIKKRFLSDEHVYKSFLDILNM 178

Query: 162  YRKENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILR--DRSS 219
            YRKE+K I EVY EV  LF+DH DLLEEFT FLPD+S A S  + P  RNS+ R  +R S
Sbjct: 179  YRKEHKDIGEVYSEVATLFKDHRDLLEEFTRFLPDTSAAPSTQHAPYIRNSLQRFNERGS 238

Query: 220  AMPTARQVHVDKKERA---MASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERRD 276
              P  RQ+  DK+      + SH DRD+S +RP+ D D+ ++   K+QR+R  +ER    
Sbjct: 239  MAPMIRQMPADKQRYRRDRLPSH-DRDMSAERPELDDDKTMMNIHKEQRKRESRER---- 293

Query: 277  DHRRERERDDRDFENDVNRDFSMQRFPHKRKSARKIEDSTAEPLHQGGEGDENFGMHPVS 336
               R R++D+R+ + D NRD ++QRFP K+KS +K E          G G          
Sbjct: 294  ---RMRDQDEREHDLDNNRDLNLQRFPDKKKSVKKAE----------GPG---------- 330

Query: 337  SSYDDKNAMKSMFSQELSFCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDL 394
                       M+SQ  SFCEKVK KL   DDYQ FL+CLH+++  II R++LQ+LV DL
Sbjct: 331  -----------MYSQAFSFCEKVKGKLSSSDDYQTFLKCLHIFSNGIIKRNDLQNLVTDL 379

Query: 395  LGRYPDLMDGFNGFLARCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDG 454
            LG++ DLMD FN FL RCE  +  LA VMSKKSL  +  + +S K+E++D++  R+ D  
Sbjct: 380  LGKHSDLMDEFNDFLERCENIDGFLAGVMSKKSLSTDAHLSRSSKLEEKDKEHKRDLDG- 438

Query: 455  VKDRDREAREKDRLDKSVAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRL 514
                   A+EK+R                     ++KY+ K IQELDLS+C+RCTPSYRL
Sbjct: 439  -------AKEKERY--------------------REKYMGKSIQELDLSDCKRCTPSYRL 471

Query: 515  LPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELD 574
            LP +Y IP+ASQR+ELGA+VLNDHWVSVTSGSEDYSFKHMR+NQYEESLFRCEDDR+ELD
Sbjct: 472  LPADYPIPTASQRSELGAQVLNDHWVSVTSGSEDYSFKHMRRNQYEESLFRCEDDRYELD 531

Query: 575  MLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFTALNLRCIERLYGDHGLDVMDVL 634
            MLLESV+   K+ EEL   IN N I  +   R+EDHFT LNLRCIERLYGDHGLDV+D+L
Sbjct: 532  MLLESVSSAAKKAEELYNSINENKISVETLNRIEDHFTVLNLRCIERLYGDHGLDVIDIL 591

Query: 635  RKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSL 694
            RKN + ALPVILTRLKQKQEEW++CRSDFNKVWAEIY+KN++KSLDHRSFYFKQQDSK+L
Sbjct: 592  RKNPTHALPVILTRLKQKQEEWSKCRSDFNKVWAEIYAKNHYKSLDHRSFYFKQQDSKNL 651

Query: 695  GAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLIKYSCG 754
              K+L  EIKEI EK++KEDD++ +IAAGN++ ++PHLEFEYSD  IHEDLY+L++YSC 
Sbjct: 652  STKSLVTEIKEIKEKQQKEDDIIQSIAAGNKQPLIPHLEFEYSDVGIHEDLYKLVRYSCE 711

Query: 755  EMCTT-EQLDKVMKIWTTFLEPMLGVPSRPQGAEDTEDVVKAKSHTVKSRAASVGDSDGS 813
            E+ ++ E L+K+M++W+TFLEPMLGVPS+  G E  ED  +   H V++  A     DGS
Sbjct: 712  ELFSSKELLNKIMRLWSTFLEPMLGVPSQSHGTERAED--RKTGHNVRNFGAPNVGGDGS 769

Query: 814  PDGDAAAMTSKHSNPSRNGDESIPPEQSSSSRAWLPNGDHGIKEDVSVEADHNARKSDNF 873
            P  D  ++ S+   P  + +E+        +  W        KE+ SV  +  +R     
Sbjct: 770  PREDTLSINSR--VPKSDKNEADGRVTEVKNVHWTTVAASNDKENGSVGGEIVSR----- 822

Query: 874  CDSSEQDKVQNNAAMADETSGISKQASTNERLIGTNAAIAAAADQSNGRSNIENTSGLSV 933
             D    DK Q N    D+ SG SKQ ++ E     N +IA   + S  R+N++ +SG ++
Sbjct: 823  -DDPLMDKGQKNVECNDKASGFSKQFASGEEGAKNNVSIAIRGENSLNRTNLDASSGCAL 881

Query: 934  AHSRPGNHIVEGGLELRSSNEILPSSEGGECSRQNISTNGVMTEGAKILRYNAESVKQFK 993
              S+P +  V+  +  +S    +PS EG + +      NGV++E +K+  ++ ES    K
Sbjct: 882  TPSQPTD--VDDSVS-KSQGVNVPSVEGCDMATPVPVVNGVLSESSKVKTHD-ESAGPCK 937

Query: 994  IEREEGELSPNGDFEEDNFAVYGESGLEAVHKAK 1027
            IE+EEGELSP GD EEDN+  YG+S ++++ K+K
Sbjct: 938  IEKEEGELSPIGDSEEDNYVAYGDSNVQSMAKSK 971


>gi|115434074|ref|NP_001041795.1| Os01g0109700 [Oryza sativa Japonica Group]
 gi|113531326|dbj|BAF03709.1| Os01g0109700, partial [Oryza sativa Japonica Group]
          Length = 1326

 Score =  975 bits (2520), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 542/965 (56%), Positives = 676/965 (70%), Gaps = 73/965 (7%)

Query: 72   VMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLEDEQPPPKKPVEF 131
            VM+DFK++RIDT GVI RVK LF G+ +LILGFNTFLPKGY I L  E      KKPV+F
Sbjct: 1    VMRDFKSERIDTNGVIIRVKTLFNGYPELILGFNTFLPKGYAIKLQEE------KKPVDF 54

Query: 132  EEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFT 191
             EAINFVNKIK RFQ D+HVYK+FLDILNMYRK+NKSI +VY EV  LF DH DLLEEF 
Sbjct: 55   VEAINFVNKIKNRFQHDEHVYKAFLDILNMYRKDNKSIQDVYHEVAVLFADHKDLLEEFQ 114

Query: 192  HFLPDSSGAASIHYVPSGRNSILRD-RSSAMPTARQVHVDKKERAMASHADRDLSVDRPD 250
            HFLPD+S       V   R  I RD R+S +P A +   +K+++A   HADR+ SVDRPD
Sbjct: 115  HFLPDTS--VPPQAVAPSRPGIRRDDRTSLVPPASRN--EKRDKAHP-HADRE-SVDRPD 168

Query: 251  PDHDRVLLKSDKDQRRRGEKERERRDDHRRERERDDRDFENDVNRDFSMQRFPHKRKSAR 310
             DH  V+      QRRR  K+R   D   ++ E D +D       D  ++R P      R
Sbjct: 169  LDH--VI------QRRR-PKDRHDYDRGDKDGELDSKDL------DIGLKRKPF----PR 209

Query: 311  KIEDSTAEPLHQGGEGDENFGMHPVSSS-YDDKNAMKSMFSQELSFCEKVKDKLRDD-YQ 368
            K+ED T+   H GG   EN G+   S+S YD+K+A+KS+++QE  FCEKVK+KL  D YQ
Sbjct: 210  KMEDPTSADAHHGGPL-ENHGILGASASLYDNKDALKSVYTQEFHFCEKVKEKLEHDAYQ 268

Query: 369  EFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLARCEKSEELLADVMSKKSL 428
            EFL+CLH+Y++EIITRSEL++LV D+L ++PDLMDGFN FL  CE  +  LA V SK+  
Sbjct: 269  EFLKCLHIYSQEIITRSELKNLVNDILQQHPDLMDGFNEFLEHCENIDGFLAGVFSKRQT 328

Query: 429  WNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRLDKSVAFVNKDVGPKMSMYSS 488
               GRI   VK E        ER +G K  ++E    DR++K  A+  K+   +  ++SS
Sbjct: 329  ---GRI---VKTE--------ERKEGGKGTEKEP---DRIEKVPAY--KEAPSQKPVFSS 369

Query: 489  KDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSED 548
            K+KY+ KP+ ELDLSNC+RCTPSYRLLPK+Y +P A  +TELGA VLNDHWVSVTSGSED
Sbjct: 370  KEKYIYKPVSELDLSNCQRCTPSYRLLPKHYPMPPAGNKTELGASVLNDHWVSVTSGSED 429

Query: 549  YSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVE 608
            YSFKHMRKNQYEESLFRCEDDRFELDMLLESVN  TKRVEEL+EK+ +N++K D PIR++
Sbjct: 430  YSFKHMRKNQYEESLFRCEDDRFELDMLLESVNAATKRVEELIEKMQDNSLKPDSPIRID 489

Query: 609  DHFTALNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWA 668
            +H T LNLRCIERLYGDHGLDVMDVLRKNAS+ALPVILTRLKQKQEEW+RCRSDFNKVWA
Sbjct: 490  EHLTPLNLRCIERLYGDHGLDVMDVLRKNASVALPVILTRLKQKQEEWSRCRSDFNKVWA 549

Query: 669  EIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSI 728
            EIY+KNYHKSLDHRSFYFKQQD+K+L  K+L  EIKEI+EKKRKEDDVLLAIAAGNRR I
Sbjct: 550  EIYAKNYHKSLDHRSFYFKQQDTKNLSTKSLLTEIKEINEKKRKEDDVLLAIAAGNRRPI 609

Query: 729  VPHLEFEYSDPDIHEDLYQLIKYSCGEMC-TTEQLDKVMKIWTTFLEPMLGVPSRPQGAE 787
            VP++ F+Y D +IHED+Y++IKYSCGE+C +++QLDKV++IWTTFLEP+LGV  R  GAE
Sbjct: 610  VPNMSFDYVDSNIHEDMYKIIKYSCGEVCSSSDQLDKVVRIWTTFLEPILGVQPRTHGAE 669

Query: 788  DTEDVVKAKSHTVKSRAASVGDSDGSPDGDAAAMTSKHSNPSRNGDESIPPEQSSSSRAW 847
            D  D VK KS T KS  A+VG+ + +    AA   +KH +     DE+IP EQ+ SS A 
Sbjct: 670  DA-DAVKPKSRTTKSGLATVGEINTT----AAGAVAKHGH-----DENIPQEQTPSSLAR 719

Query: 848  LPNGDHGIKEDVSVEADHNARKSDNFCDSSEQDKVQNNAAMADETSGISKQASTNERLIG 907
            + NG     ++   + D  AR+++   +++   +VQ  +   +E   +S Q    ER   
Sbjct: 720  MVNGVATDTQNGFHDVDRTARRAEEPSNTAVNGRVQGASPGTNEIPAVSTQNMPTER-SA 778

Query: 908  TNAAIAAAADQSNGRSNIENTSGLSVAH-SRPGNHIVEGGLELRSSNEILPSSEGGECSR 966
             N  +A      N ++N+E TSG++ +  S  GN   +   E R+ NE LPS EGGE  R
Sbjct: 779  ENIPVARTEQHGNAKANLEPTSGVNASRSSHAGN---DTAAEARAGNETLPSVEGGETGR 835

Query: 967  QNISTN-GVMTEGAKILRYNAESVKQF--KIEREEGELSPNGDFEEDNFAVYGESGLEAV 1023
               + N G  +EG K   +N  S      K+EREEGELSPNGDFEEDNFA + +  ++ V
Sbjct: 836  SGSTLNGGGASEGNKGRLFNEASASHNTPKVEREEGELSPNGDFEEDNFAPFEDGAVDGV 895

Query: 1024 HKAKD 1028
             KAK+
Sbjct: 896  SKAKE 900


>gi|215768290|dbj|BAH00519.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 1325

 Score =  972 bits (2514), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 541/964 (56%), Positives = 675/964 (70%), Gaps = 73/964 (7%)

Query: 73   MKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLEDEQPPPKKPVEFE 132
            M+DFK++RIDT GVI RVK LF G+ +LILGFNTFLPKGY I L  E      KKPV+F 
Sbjct: 1    MRDFKSERIDTNGVIIRVKTLFNGYPELILGFNTFLPKGYAIKLQEE------KKPVDFV 54

Query: 133  EAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTH 192
            EAINFVNKIK RFQ D+HVYK+FLDILNMYRK+NKSI +VY EV  LF DH DLLEEF H
Sbjct: 55   EAINFVNKIKNRFQHDEHVYKAFLDILNMYRKDNKSIQDVYHEVAVLFADHKDLLEEFQH 114

Query: 193  FLPDSSGAASIHYVPSGRNSILRD-RSSAMPTARQVHVDKKERAMASHADRDLSVDRPDP 251
            FLPD+S       V   R  I RD R+S +P A +   +K+++A   HADR+ SVDRPD 
Sbjct: 115  FLPDTS--VPPQAVAPSRPGIRRDDRTSLVPPASRN--EKRDKAHP-HADRE-SVDRPDL 168

Query: 252  DHDRVLLKSDKDQRRRGEKERERRDDHRRERERDDRDFENDVNRDFSMQRFPHKRKSARK 311
            DH  V+      QRRR  K+R   D   ++ E D +D       D  ++R P      RK
Sbjct: 169  DH--VI------QRRR-PKDRHDYDRGDKDGELDSKDL------DIGLKRKPF----PRK 209

Query: 312  IEDSTAEPLHQGGEGDENFGMHPVSSS-YDDKNAMKSMFSQELSFCEKVKDKLRDD-YQE 369
            +ED T+   H GG   EN G+   S+S YD+K+A+KS+++QE  FCEKVK+KL  D YQE
Sbjct: 210  MEDPTSADAHHGGPL-ENHGILGASASLYDNKDALKSVYTQEFHFCEKVKEKLEHDAYQE 268

Query: 370  FLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLARCEKSEELLADVMSKKSLW 429
            FL+CLH+Y++EIITRSEL++LV D+L ++PDLMDGFN FL  CE  +  LA V SK+   
Sbjct: 269  FLKCLHIYSQEIITRSELKNLVNDILQQHPDLMDGFNEFLEHCENIDGFLAGVFSKRQT- 327

Query: 430  NEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRLDKSVAFVNKDVGPKMSMYSSK 489
              GRI   VK E        ER +G K  ++E    DR++K  A+  K+   +  ++SSK
Sbjct: 328  --GRI---VKTE--------ERKEGGKGTEKEP---DRIEKVPAY--KEAPSQKPVFSSK 369

Query: 490  DKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDY 549
            +KY+ KP+ ELDLSNC+RCTPSYRLLPK+Y +P A  +TELGA VLNDHWVSVTSGSEDY
Sbjct: 370  EKYIYKPVSELDLSNCQRCTPSYRLLPKHYPMPPAGNKTELGASVLNDHWVSVTSGSEDY 429

Query: 550  SFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVED 609
            SFKHMRKNQYEESLFRCEDDRFELDMLLESVN  TKRVEEL+EK+ +N++K D PIR+++
Sbjct: 430  SFKHMRKNQYEESLFRCEDDRFELDMLLESVNAATKRVEELIEKMQDNSLKPDSPIRIDE 489

Query: 610  HFTALNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAE 669
            H T LNLRCIERLYGDHGLDVMDVLRKNAS+ALPVILTRLKQKQEEW+RCRSDFNKVWAE
Sbjct: 490  HLTPLNLRCIERLYGDHGLDVMDVLRKNASVALPVILTRLKQKQEEWSRCRSDFNKVWAE 549

Query: 670  IYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIV 729
            IY+KNYHKSLDHRSFYFKQQD+K+L  K+L  EIKEI+EKKRKEDDVLLAIAAGNRR IV
Sbjct: 550  IYAKNYHKSLDHRSFYFKQQDTKNLSTKSLLTEIKEINEKKRKEDDVLLAIAAGNRRPIV 609

Query: 730  PHLEFEYSDPDIHEDLYQLIKYSCGEMC-TTEQLDKVMKIWTTFLEPMLGVPSRPQGAED 788
            P++ F+Y D +IHED+Y++IKYSCGE+C +++QLDKV++IWTTFLEP+LGV  R  GAED
Sbjct: 610  PNMSFDYVDSNIHEDMYKIIKYSCGEVCSSSDQLDKVVRIWTTFLEPILGVQPRTHGAED 669

Query: 789  TEDVVKAKSHTVKSRAASVGDSDGSPDGDAAAMTSKHSNPSRNGDESIPPEQSSSSRAWL 848
              D VK KS T KS  A+VG+ + +    AA   +KH +     DE+IP EQ+ SS A +
Sbjct: 670  A-DAVKPKSRTTKSGLATVGEINTT----AAGAVAKHGH-----DENIPQEQTPSSLARM 719

Query: 849  PNGDHGIKEDVSVEADHNARKSDNFCDSSEQDKVQNNAAMADETSGISKQASTNERLIGT 908
             NG     ++   + D  AR+++   +++   +VQ  +   +E   +S Q    ER    
Sbjct: 720  VNGVATDTQNGFHDVDRTARRAEEPSNTAVNGRVQGASPGTNEIPAVSTQNMPTER-SAE 778

Query: 909  NAAIAAAADQSNGRSNIENTSGLSVAH-SRPGNHIVEGGLELRSSNEILPSSEGGECSRQ 967
            N  +A      N ++N+E TSG++ +  S  GN   +   E R+ NE LPS EGGE  R 
Sbjct: 779  NIPVARTEQHGNAKANLEPTSGVNASRSSHAGN---DTAAEARAGNETLPSVEGGETGRS 835

Query: 968  NISTN-GVMTEGAKILRYNAESVKQF--KIEREEGELSPNGDFEEDNFAVYGESGLEAVH 1024
              + N G  +EG K   +N  S      K+EREEGELSPNGDFEEDNFA + +  ++ V 
Sbjct: 836  GSTLNGGGASEGNKGRLFNEASASHNTPKVEREEGELSPNGDFEEDNFAPFEDGAVDGVS 895

Query: 1025 KAKD 1028
            KAK+
Sbjct: 896  KAKE 899


>gi|357496209|ref|XP_003618393.1| Paired amphipathic helix protein Sin3 [Medicago truncatula]
 gi|355493408|gb|AES74611.1| Paired amphipathic helix protein Sin3 [Medicago truncatula]
          Length = 1404

 Score =  941 bits (2433), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 534/1063 (50%), Positives = 691/1063 (65%), Gaps = 116/1063 (10%)

Query: 1    MKRSRDEVYMNS--QIKRPMISSRGEP--------------SGQTQVVGGGGGGGAQKLT 44
            MKR+RD++Y  S  Q KRP  SSRG+                      GGGG   +QKLT
Sbjct: 1    MKRARDDIYSASASQFKRPFGSSRGDSYGQGPGGGGGGGGGGVNGGGGGGGGATTSQKLT 60

Query: 45   TNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGF 104
            TNDAL+YLK VK++FQD++EKYD FLEVMKDFKAQ+ DT GVIARVKELFKGH  LI GF
Sbjct: 61   TNDALSYLKEVKNMFQDQKEKYDMFLEVMKDFKAQKTDTTGVIARVKELFKGHNHLIFGF 120

Query: 105  NTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRK 164
            NTFLPKGYEITL  ++++ PPKK VEFEEAI+FVNKIK RFQ D+HVYKSFLDILNMYRK
Sbjct: 121  NTFLPKGYEITLDEDEDEAPPKKTVEFEEAISFVNKIKKRFQNDEHVYKSFLDILNMYRK 180

Query: 165  ENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSI--LRDRSSAMP 222
            E+K+ITEVY EV  LF+ H DLL+EFT FLPD+S A S  + P GRNS+  L +RSS  P
Sbjct: 181  EHKTITEVYSEVATLFKSHGDLLDEFTRFLPDNSSAPSTQHAPFGRNSMQRLNERSSMAP 240

Query: 223  TARQVHVDKKE--RAMASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERRDDHRR 280
              RQ+ VDK+   R   S  DRD+SV+RPD D D+ ++   K+QR+R  ++R  RD   R
Sbjct: 241  MMRQMQVDKQRYRRDRFSSHDRDISVERPDLDDDKTMMNFHKEQRKRESRDRRMRDHDDR 300

Query: 281  ERERDDRDFENDVNRDFSMQRFPHKRKSARKIEDSTAEPLHQGGEGDENFGMHPVSSSYD 340
            E + D+       +RD   QRFP K+KS +K E               +F  H      D
Sbjct: 301  EHDLDN-------SRDLHSQRFPDKKKSVKKTEAY-------------DFAAH------D 334

Query: 341  DKNAMKS-----------------MFSQELSFCEKVKDKLR--DDYQEFLRCLHLYTKEI 381
            DK+ MK                  M+SQ +SFC+KVK+KL   +DYQ FL+CL+++   I
Sbjct: 335  DKDGMKRKISYYALDYYIAWIRAVMYSQAISFCDKVKEKLSSAEDYQTFLKCLNIFGNGI 394

Query: 382  ITRSELQSLVGDLLGRYPDLMDGFNGFLARCEKSEELLADVMSKKSLWNEGRIPKSVKVE 441
            I +++LQ+LV DLLG++ DLM  FN FL RCE  +  LA VMSKK L  +G + +S K+E
Sbjct: 395  IKKNDLQNLVTDLLGKHSDLMSEFNDFLERCENIDGFLAGVMSKKPLAGDGHLSRSSKLE 454

Query: 442  DRDRDRDRERDDGVKDRDREAREKDRLDKSVAFVNKDVGPKMSMYSSKDKYLAKPIQELD 501
            D++  R+    DG K+++R                            K+KY+ K IQELD
Sbjct: 455  DKEHRRET---DGGKEKER---------------------------YKEKYMGKSIQELD 484

Query: 502  LSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEE 561
            LS+C+RC+PSYRLLP +Y IP+ASQR+ELGA VLNDHWVSVTSGSEDYSFKHMR+NQYEE
Sbjct: 485  LSDCKRCSPSYRLLPADYPIPTASQRSELGAHVLNDHWVSVTSGSEDYSFKHMRRNQYEE 544

Query: 562  SLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFTALNLRCIER 621
            SLFRCEDDRFELDMLLESV+   KR +EL   I  N I  +   R+EDHFT LNLRCIER
Sbjct: 545  SLFRCEDDRFELDMLLESVSSAAKRADELYNSIVENKISVESLSRIEDHFTVLNLRCIER 604

Query: 622  LYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDH 681
            LYGDHGLDV+D+LRKN + ALPVILTRLKQKQEEW RCRSDFNKVWA+IYSKN++KSLDH
Sbjct: 605  LYGDHGLDVLDILRKNPTHALPVILTRLKQKQEEWNRCRSDFNKVWADIYSKNHYKSLDH 664

Query: 682  RSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDI 741
            RSFYFKQQDSK+L  K+L  EIKEI EK++KEDD++  IAAG +  ++PH EF++SD +I
Sbjct: 665  RSFYFKQQDSKNLSTKSLVTEIKEIKEKQQKEDDIVQTIAAGAKHPLIPHFEFDFSDAEI 724

Query: 742  HEDLYQLIKYSCGEMCTTEQL-DKVMKIWTTFLEPMLGVPSRPQGAEDTEDVVKAKSHTV 800
            HEDLY+L++YSC E+  +++L +K+M++W+TFLEPMLGV S+    E  ED  +   H  
Sbjct: 725  HEDLYKLVRYSCEEVFQSKELFNKIMRLWSTFLEPMLGVTSQSHETERAED--RKVGHNA 782

Query: 801  KSRAASVGDSDGSPDGDAAAMTSKHSNPSRNGDESIPPEQSSSSRAWLPNGDHGIKEDVS 860
            +S  A     DGSP+ ++    S+     +N  +    E  +  R  +   D   KE+ S
Sbjct: 783  RSSVAPNVGGDGSPNRES---NSRLPKSDKNEVDGRVGEVKNGHRTSVAAND---KENGS 836

Query: 861  VEADHNARKSDNFCDSSEQDKVQNNAAMADETSGISKQASTNERLIGTNAAIAAAADQSN 920
            V  +  +R  D+  D+  Q  V++    +D+  G  KQ S++E+     AA  +A+    
Sbjct: 837  VGGELVSR-DDHLMDNKGQKSVES----SDKAPGFVKQFSSDEQ-----AARNSASVTIR 886

Query: 921  GRSNIENTSGLSVAHSRPGNHIVEGGLELRSSNEI-LPSSEGGECSRQNISTNGVMTEGA 979
            G S++  + G  +  +RP +  V   + +  S  + +P  EG   +      NGV+ E +
Sbjct: 887  GESSVHMSPGRVLTPTRPTDADVSVAVVIAKSPSVNVPLVEGVAAAPPVPVANGVLVENS 946

Query: 980  KILRYNAESVKQFKIEREEGELSPNGDFEEDNFAVYGESGLEA 1022
            K+ + N ES    K+E+EEGELSPN D EEDNF  YG+S  ++
Sbjct: 947  KV-KSNEESSVPCKVEKEEGELSPNADSEEDNFVAYGDSNAQS 988


>gi|224060012|ref|XP_002300028.1| hypothetical protein POPTRDRAFT_797843 [Populus trichocarpa]
 gi|222847286|gb|EEE84833.1| hypothetical protein POPTRDRAFT_797843 [Populus trichocarpa]
          Length = 1273

 Score =  941 bits (2432), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 500/883 (56%), Positives = 629/883 (71%), Gaps = 80/883 (9%)

Query: 1   MKRSRDEVY--------MNSQIKRPMISSRGEPSGQTQV---VGGGGGGGAQKLTTNDAL 49
           MKR RD+++           + KRP+ S+RGE  GQTQ+    GGGG G +QKLTT DAL
Sbjct: 1   MKRMRDDIFSAPAPAPAPAPEFKRPLTSTRGESYGQTQIPGGGGGGGSGNSQKLTTTDAL 60

Query: 50  AYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLP 109
            YLK VKD+FQD++EKYD FLEVMKDFKAQR DT+GVI RVKELFKGH +LI GFNTFLP
Sbjct: 61  QYLKEVKDMFQDQKEKYDMFLEVMKDFKAQRTDTSGVIVRVKELFKGHNNLIFGFNTFLP 120

Query: 110 KGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI 169
           KGYEITL  EDE  PPKK VEF +AINFVNKIK RFQ D+ VYKSFLDILNMYRKE+K I
Sbjct: 121 KGYEITLD-EDEAAPPKKTVEFNQAINFVNKIKKRFQNDERVYKSFLDILNMYRKEHKDI 179

Query: 170 TEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNS--ILRDRSSAMPTARQV 227
            EVY EV ALF+DH DLL+EF  FLPD+S     H VP  RNS     +R+S  P+ARQ 
Sbjct: 180 NEVYSEVSALFEDHHDLLDEFARFLPDTSATPITHTVPYARNSNQHYNERNSTAPSARQT 239

Query: 228 HVDKKER--AMASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERRDDHRRERERD 285
            +DK+ R    +SHA+RDLSVDRP+ + D+ ++K  K+QR+R +KE    +  RR  ++D
Sbjct: 240 QIDKRRRDKVSSSHAERDLSVDRPEMEDDKGMVKVHKEQRKRADKE----NWDRRIHDQD 295

Query: 286 DRDFENDVNRDFSMQRFPHKRKSARKIEDSTAEPLHQGGEGDENFGMHPVSSSYDDKNAM 345
           DR+ E+D +RDFS+Q F  KR S++K+E          G G+ NF      + YDDK+ +
Sbjct: 296 DREPEHDSSRDFSLQPFLEKRNSSQKVE----------GFGNSNF------ACYDDKDNI 339

Query: 346 KSMFSQELSFCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMD 403
           KS+++QE  F EKVK+KL   DDYQ FL+CL++Y + II ++ELQ+LV DLLG+YPDLM+
Sbjct: 340 KSIYNQEFVFFEKVKEKLGNGDDYQAFLKCLNIYNQGIIKKNELQNLVTDLLGKYPDLME 399

Query: 404 GFNGFLARCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAR 463
            F   L  C    E         SL N+G+  +S+K+ED+++++  ++ DG K+++R   
Sbjct: 400 EFIDHL-ECHGHIE---------SLGNDGQASRSLKLEDKEKEQ--KQIDGAKEKER--- 444

Query: 464 EKDRLDKSVAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPS 523
                                    ++KY+AK IQELDLSNCERCTPSYR LP +Y I S
Sbjct: 445 ------------------------CREKYMAKSIQELDLSNCERCTPSYRFLPDDYPISS 480

Query: 524 ASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVT 583
           ASQR+ELGA+VLNDHWVSVTSGSEDYSFKHMR+NQ+EESLFRCEDDRFELDMLLESV+ T
Sbjct: 481 ASQRSELGAQVLNDHWVSVTSGSEDYSFKHMRRNQFEESLFRCEDDRFELDMLLESVSST 540

Query: 584 TKRVEELLEKINNNTIKTDGPIRVEDHFTALNLRCIERLYGDHGLDVMDVLRKNASLALP 643
           TKR EEL   IN N ++T   I +EDHFTALNLRCIERLYGDHGLDVM++LRKN SLALP
Sbjct: 541 TKRAEELFNGINENKVET--SIHIEDHFTALNLRCIERLYGDHGLDVMEILRKNRSLALP 598

Query: 644 VILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEI 703
           VILTRLKQKQEEW RCR+DFNKVWAEIY KN++KSLDHRSFYFKQQ+SK+L  K+L  EI
Sbjct: 599 VILTRLKQKQEEWTRCRTDFNKVWAEIYVKNHYKSLDHRSFYFKQQESKNLSTKSLVVEI 658

Query: 704 KEISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLIKYSCGEMCTT-EQL 762
           KE+ EK+++ED VLLA A G R+ +VP+L++ Y D  IHEDLY+L++YSC E+C+T EQL
Sbjct: 659 KELKEKQQREDGVLLAFATGKRQPLVPNLKYNYPDKKIHEDLYKLVQYSCKEVCSTKEQL 718

Query: 763 DKVMKIWTTFLEPMLGVPSRPQGAEDTEDVVKAKSHTVKSRAASVGDSDGSPDGDAAAMT 822
           +KV+++WT F+EPMLG+ S P G+E  E   K K   +   ++S+ + DGSP+   A  T
Sbjct: 719 NKVIRLWTNFVEPMLGIVSHPDGSESCEGEGKPKHPLMNCTSSSIAEKDGSPNAVPAIST 778

Query: 823 SKHSNPSRNGDESIPPEQSSSSRAWLPNGDHGIKEDVSVEADH 865
            K +    NGDE++  E  +  +  L + D   KED   E DH
Sbjct: 779 FKQAKSPSNGDENMLQELGNLCKLSLKSSDKLAKEDSLCELDH 821



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/89 (44%), Positives = 57/89 (64%), Gaps = 16/89 (17%)

Query: 940  NHIVEGGLELRSSNEILPSSEGGECSRQNISTNGVMTEGAKILRYNAESVKQFKIEREEG 999
            +H+VEG + ++S   +LP++EG             + +GAK  R + ES    KIE+EEG
Sbjct: 820  DHVVEGVIVVKS---VLPANEG-------------VRDGAKNDRCHEESTGPSKIEKEEG 863

Query: 1000 ELSPNGDFEEDNFAVYGESGLEAVHKAKD 1028
            ELSPNGDFEEDNF  YG++GL+A+   K+
Sbjct: 864  ELSPNGDFEEDNFDAYGDTGLQAIATGKN 892


>gi|297832804|ref|XP_002884284.1| hypothetical protein ARALYDRAFT_477381 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297330124|gb|EFH60543.1| hypothetical protein ARALYDRAFT_477381 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1378

 Score =  919 bits (2374), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 516/1047 (49%), Positives = 683/1047 (65%), Gaps = 82/1047 (7%)

Query: 1    MKRSRDEVYMNSQIKRPMISSRGEPSGQTQVVGGG---GGG-------GAQKLTTNDALA 50
            MKR RD+VY +      + SSR +  GQ+ V G G   GGG         QKLTTNDAL+
Sbjct: 1    MKRIRDDVYASGS----LASSRAQLYGQSPVPGSGDTEGGGRMAGGEITCQKLTTNDALS 56

Query: 51   YLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPK 110
            YL+ VK++FQD+R+KYD FLEVMKDFKAQR DT GVIARVKELFKGH +LI GFNTFLPK
Sbjct: 57   YLREVKEMFQDQRDKYDRFLEVMKDFKAQRTDTGGVIARVKELFKGHNNLIYGFNTFLPK 116

Query: 111  GYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSIT 170
            GYEITL  E++   PKK VEFEEAINFVNKIK RF+ D+HVYKSFL+ILNMYRKENK I+
Sbjct: 117  GYEITLIEEEDHALPKKTVEFEEAINFVNKIKKRFKHDEHVYKSFLEILNMYRKENKEIS 176

Query: 171  EVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQVHVD 230
            EVY EV  LF+ H DLLEEFT FLP S  + S       +     DR S  P   Q+ V+
Sbjct: 177  EVYNEVSILFEGHLDLLEEFTRFLPASLPSHSAAQHSRSQAQRYNDRGSGPPLIHQMQVE 236

Query: 231  K---KERAMASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERRDDHRRERERDDR 287
            K   +ERA+AS  D   +V+R D + D+ ++K  ++QR+R +KE    +  RR R+ DDR
Sbjct: 237  KERRRERAVASRGD--YNVERHDLNDDKTMVKMQREQRKRLDKE----NRARRGRDLDDR 290

Query: 288  DFENDVNRDFSMQRFPHKRKSARKIEDSTAEPLHQGGEGDENFGMHPVSSSYDDKNAMKS 347
            + E D     ++  FP KRKS+R+ E   A               +  S+S+ +K+ +KS
Sbjct: 291  EAEQD-----NLHHFPEKRKSSRRAEGLEA---------------YAGSASHSEKDNLKS 330

Query: 348  MFSQELSFCEKVKDKL--RDDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGF 405
            M+++   FCEKVK++L  +DDYQ FL+CL++++  II R++LQ+LV DLLG++PDLMD F
Sbjct: 331  MYNKAFVFCEKVKERLCSQDDYQTFLKCLNIFSNGIIQRNDLQNLVSDLLGKFPDLMDEF 390

Query: 406  NGFLARCEKSEEL--LADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAR 463
            N F  RCE  +    LA VMSKKS  +E  + + VKVE+++ +   + +  VK+ ++   
Sbjct: 391  NQFFERCESIDGFQHLAGVMSKKSFSSE-LLSRPVKVEEKESEHKPDLE-AVKETEQ--- 445

Query: 464  EKDRLDKSVAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPS 523
                                     K++Y+ K IQELDLS+CE CTPSYRLLP +Y IP+
Sbjct: 446  ------------------------YKEEYMGKSIQELDLSDCECCTPSYRLLPADYPIPT 481

Query: 524  ASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVT 583
            ASQR+ELGAEVLNDHWVSVTSGSEDYSFKHMR+NQYEESLFRCEDDRFELDMLLESV+  
Sbjct: 482  ASQRSELGAEVLNDHWVSVTSGSEDYSFKHMRRNQYEESLFRCEDDRFELDMLLESVSSA 541

Query: 584  TKRVEELLEKINNNTIKTDGPIRVEDHFTALNLRCIERLYGDHGLDVMDVLRKNASLALP 643
             +  E LL  I    I   G  R+EDHFTALNLRCIERLYGDHGLDV+D+L KN + ALP
Sbjct: 542  ARSAESLLNIITEKKISFSGSFRIEDHFTALNLRCIERLYGDHGLDVIDILHKNLATALP 601

Query: 644  VILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEI 703
            VILTRLKQKQ+EW +CR +F+KVWA +Y+KN++KSLDHRSFYFKQQDSK+L AK+L AEI
Sbjct: 602  VILTRLKQKQDEWKKCREEFDKVWANVYAKNHYKSLDHRSFYFKQQDSKNLNAKSLVAEI 661

Query: 704  KEISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLIKYSCGEMCTT-EQL 762
            KE+ EK + EDDVLL+I+AG R+ I P+LE+EY +  IHEDLY+L+++SC E+C+T EQL
Sbjct: 662  KELKEKSQNEDDVLLSISAGYRQPINPNLEYEYFNRAIHEDLYKLVQFSCEELCSTKEQL 721

Query: 763  DKVMKIWTTFLEPMLGVPSRPQGAEDTEDVV-KAKSHTVKSRAASVGDSDGSPDGDAAAM 821
             KV+++W  FLE +LGVP R +GA+  EDVV K K+  V    ++ G+S  S   D A +
Sbjct: 722  SKVLRLWVNFLEAVLGVPPRDEGADLVEDVVIKPKTLDVNHSTSTNGESAVSSGADTARL 781

Query: 822  TSKHSNPSRNGDESIPPEQSSSSRAWLPNGDHGIKEDVSVEADHNARKSDNFCDSSEQDK 881
             S+    + NGDE+            L N D   KE++  + D   R  D  C + +  K
Sbjct: 782  ASRKLKSAANGDENASSGPIKHGGIGLVNKDSTGKENLK-DTDTAIRDGDT-CSAVKPQK 839

Query: 882  VQNNAAMADETSGISKQASTNERLIGTNAAIAAAADQSNGRSNIENTSGLSVAHSRPGNH 941
             Q     AD+           ER + ++ +I +  + S+     E+ +G     ++P N 
Sbjct: 840  EQETGNEADKRVVKPIPMDICERAVTSSLSIPSGGENSHCVVGKEDLAGSHEIQAKPSNT 899

Query: 942  IVEGGLELRSSNEILPSSEGGECSRQNISTNGVMTEGAKILRYNAESVKQFKIEREEGEL 1001
              +   ++  S E + S++GG+     +  NG+ ++ +K  R + E     +IE+EEGEL
Sbjct: 900  FTDIHHDV-DSIETVHSTQGGDVGTSIVLANGLRSDSSKGTRNSDEPEGSSRIEKEEGEL 958

Query: 1002 SPNGDFEEDNFAVYGESGLEAVHKAKD 1028
            SPNGDF EDNF VY + G+++  K ++
Sbjct: 959  SPNGDF-EDNFGVYEDLGVKSTSKPEN 984


>gi|222629854|gb|EEE61986.1| hypothetical protein OsJ_16767 [Oryza sativa Japonica Group]
          Length = 1381

 Score =  917 bits (2371), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 530/1030 (51%), Positives = 664/1030 (64%), Gaps = 113/1030 (10%)

Query: 34   GGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRID----------- 82
            G G    QKLTTNDAL YLKAVKD FQDKR+KYD+FLEVM+DFK+ R             
Sbjct: 14   GQGPSQNQKLTTNDALLYLKAVKDKFQDKRDKYDEFLEVMRDFKSGRSLPSPSPSLSFPP 73

Query: 83   ---------TAGVIAR---------VKELFKGHRDLILGFNTFLPKGYEITLPLEDEQPP 124
                     T  +I +          ++  + H +LILGFN FLPKG+ I L     Q  
Sbjct: 74   IPSPINTHHTRDMILQDRHRWRHHPCQDPLQCHHELILGFNAFLPKGFAIKL-----QDL 128

Query: 125  PKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHP 184
             KKP +F EAINFVNKIK RFQ +DHVYKSFL ILNMYR  NKSI +VY EV ALF+D+P
Sbjct: 129  EKKPFDFMEAINFVNKIKARFQQEDHVYKSFLGILNMYRLHNKSIQDVYGEVAALFRDYP 188

Query: 185  DLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQVHVDKKERAMASHADRDL 244
            DLLEEF HFLPD+S A     VP G +S   DR   MP+AR   + K+ERA  S  DRD 
Sbjct: 189  DLLEEFKHFLPDTSTAPEPVTVPRGVSSRHDDRGPLMPSARNAQIIKRERAYPSTVDRDF 248

Query: 245  SVDRPDPDHDRVLLKSDKDQRRRGEKERE-RRDDHRRERERDDRDFENDVNRDFSMQRFP 303
            S+DRPDP+        D   RRR +K R+ + D  R++ E D +D E D       QR  
Sbjct: 249  SIDRPDPE--------DDPHRRRVDKGRDGKVDRSRKDYETDVKDVEYDSKDLDGGQR-- 298

Query: 304  HKRKSARKIEDSTAEPLHQGGEGDENFGMHPVSSSYDDKNAMKSMFSQELSFCEKVKDKL 363
             KRK ARK++ + A+   QG       G+   +S YDDK+A+KS +++E  FCEKVK+KL
Sbjct: 299  -KRKLARKMDGALAD-TQQG-------GVSTSTSPYDDKDALKSAYTKEFRFCEKVKEKL 349

Query: 364  RDD-YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLARCEKSEELLADV 422
              + YQEFL+CLH+Y++EIITRSEL++LV D+L  YPDLM+GFN FL +CE  +  L  V
Sbjct: 350  EPEAYQEFLKCLHIYSQEIITRSELKNLVNDILQHYPDLMNGFNDFLEQCENIDAFLEGV 409

Query: 423  MSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRLDKSVAFVNKD-VGP 481
             SK+      +  + VK+                           ++K  A  +K+    
Sbjct: 410  FSKR------KTSQIVKI---------------------------VEKGSALNSKEGATH 436

Query: 482  KMSMYSSKDKY-LAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWV 540
            K + +SSKDKY L KPI ELDLSNC+RCTPSYRLLPKNY +P AS RT+LGA VLND WV
Sbjct: 437  KATTFSSKDKYNLCKPISELDLSNCQRCTPSYRLLPKNYPMPPASCRTDLGASVLNDLWV 496

Query: 541  SVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIK 600
            SVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESV V  KRVEEL+EK+ +N+IK
Sbjct: 497  SVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVIVAIKRVEELIEKMQDNSIK 556

Query: 601  TDGPIRVEDHFTALNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCR 660
             D PIR+++H T LNLRCIERLYGDHGLDVMDVLRKNAS+ALPVILTRLKQKQEEW+RCR
Sbjct: 557  PDSPIRIDEHLTPLNLRCIERLYGDHGLDVMDVLRKNASVALPVILTRLKQKQEEWSRCR 616

Query: 661  SDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAI 720
            SDFNKVWAEIY+KNYHKSLDHRSFYFKQQD+K+L  KAL A IKE++EKKRKEDD+LL I
Sbjct: 617  SDFNKVWAEIYAKNYHKSLDHRSFYFKQQDTKNLSTKALLAAIKEVNEKKRKEDDMLLTI 676

Query: 721  AAGNRRSIVPHLEFEYSDPDIHEDLYQLIKYSCGEMC-TTEQLDKVMKIWTTFLEPMLGV 779
            A+GNRR IVP++ FEY DP+IHEDLYQ+IKYSCGE+C +++Q+DKVMKIW TFLEP+LGV
Sbjct: 677  ASGNRRPIVPNMSFEYVDPEIHEDLYQIIKYSCGEVCSSSDQVDKVMKIWATFLEPILGV 736

Query: 780  PSRPQGAEDTEDVVKAKSHTVKSRAASVGDSDGSPDGDAAAMTSKHSNPSRNGDESIPPE 839
              R  G ED     K  S + K+  A+V  ++ S +G    +T KH+    + DE +P E
Sbjct: 737  HPRGHGVEDE----KHNSRSTKAGPANVEINNASTNG---TVTVKHA----HSDEIVPKE 785

Query: 840  QSSSSRAWLPNGDHGIKEDVSVEADHNARKSDNFCDSSEQDKVQNNAAMADETSGISKQA 899
            Q+S SRA L  G     ++   +A+    + +    +    ++QN     D    +  Q 
Sbjct: 786  QASCSRAILVGGVAADAQNSLQDAERTVCRDEERPKTMLDRRLQNTTPAVDVVPAVYAQN 845

Query: 900  STNERLIGTNAAIAAAADQSNGRSNIENTSGLSVAHSRP-GNHIVEGGLELRSSNEILPS 958
             + ER +   ++  +  +Q++ R+N+E   G++   + P G  +V    E +  NE +  
Sbjct: 846  ISTERSV--ESSHLSRPEQNHSRANMEVKPGINACSATPAGGEVVS---EAKGGNEAIMG 900

Query: 959  SEGGECSRQNISTNGVMTEGAKILRYNAESVKQFKIEREEGELSPNGDFEEDNFAVYGES 1018
            S  GE  R   S N    +   I  Y   S    K+EREEGELSPNGD  E NF  +   
Sbjct: 901  S--GEI-RIPGSFNSKDNKHCPINEYCG-SHNHSKVEREEGELSPNGDVGE-NFGPFDGV 955

Query: 1019 GLEAVHKAKD 1028
             ++ V KAK+
Sbjct: 956  SVDGVSKAKE 965


>gi|297811635|ref|XP_002873701.1| hypothetical protein ARALYDRAFT_488346 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297319538|gb|EFH49960.1| hypothetical protein ARALYDRAFT_488346 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1372

 Score =  913 bits (2359), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 513/1044 (49%), Positives = 678/1044 (64%), Gaps = 97/1044 (9%)

Query: 1    MKRSRDEVYMN-SQIKRPMISSRGEPSGQTQVVGGGGGG---------GAQKLTTNDALA 50
            MKR RD++Y   SQ KRP+ SSRGE  GQ+ + G GG G           QKLTT+DAL 
Sbjct: 1    MKRIRDDIYATGSQFKRPLGSSRGESYGQSPIPGNGGTGGGSIGDGGINTQKLTTDDALT 60

Query: 51   YLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPK 110
            YLK VK++FQD+R+KYD FLEVMKDFKAQR DT GVIARVK+LFKGH +LI GFNTFLPK
Sbjct: 61   YLKEVKEMFQDQRDKYDMFLEVMKDFKAQRTDTTGVIARVKQLFKGHNNLIFGFNTFLPK 120

Query: 111  GYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSIT 170
            G+EITL  ++E+ PPKK V+FEEAI+FVNKIKTRFQ D+ VYKSFL+ILNMYR++NK IT
Sbjct: 121  GFEITL--DEEEAPPKKTVKFEEAISFVNKIKTRFQHDELVYKSFLEILNMYREDNKDIT 178

Query: 171  EVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQVHVD 230
            EVY EV  LF+DH DLLEEFT FLPDS    +   +   +     DR S  P  R++ ++
Sbjct: 179  EVYNEVSTLFEDHSDLLEEFTRFLPDSLAPHTEAQLLRSQAQRYDDRGSGPPLVRRMFME 238

Query: 231  K---KERAMASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERRDDHRRERERDDR 287
            K   +ER +AS  DRD SVDR D + D+ ++K  +DQR+R +K+          RER  R
Sbjct: 239  KDRRRERTVASRGDRDHSVDRSDLNDDKSMVKMHRDQRKRVDKDN---------RERRSR 289

Query: 288  DFENDVNRDFSMQRFPHKRKSARKIEDSTAEPLHQGGEGDENFGMHPVSSSYDDKNAMKS 347
            D E+      ++Q F  KRKS+R++E                F  +   +S+ +K  +KS
Sbjct: 290  DLEDGEAEQDNLQHFSEKRKSSRRME---------------GFEAYSGPASHSEKTNLKS 334

Query: 348  MFSQELSFCEKVKDKL--RDDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGF 405
            M++Q   FCEKVK++L  +DDYQ FL+CL++++  II R +LQ+LV D+LG++PDLMD F
Sbjct: 335  MYNQAFMFCEKVKERLCSQDDYQAFLKCLNMFSNGIIQRKDLQNLVSDVLGKFPDLMDEF 394

Query: 406  NGFLARCEKSEEL--LADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAR 463
            N F  RCE  +    LA VMSKKSL +E  + +S+K E+++R+  R+ +         A+
Sbjct: 395  NQFFERCESIDGFQHLAGVMSKKSLRSEENLSRSMKGEEKEREHKRDLE--------AAK 446

Query: 464  EKDRLDKSVAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPS 523
            EK+R                    SKDKY+ K IQELDLSNCE CTPSYRLLP +Y IPS
Sbjct: 447  EKER--------------------SKDKYMGKSIQELDLSNCESCTPSYRLLPPDYPIPS 486

Query: 524  ASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVT 583
               R + GA VLNDHWVSVTSGSEDYSFKHMR+NQYEESLFRCEDDRFELDMLLESV   
Sbjct: 487  VRHRQKSGAAVLNDHWVSVTSGSEDYSFKHMRRNQYEESLFRCEDDRFELDMLLESVGSA 546

Query: 584  TKRVEELLEKINNNTIKTDGPIRVEDHFTALNLRCIERLYGDHGLDVMDVLRKNASLALP 643
             K  EELL  I    I  +G  R+EDHFTALNLRCIERLYGDHGLDV D++RKN + ALP
Sbjct: 547  AKSAEELLNIIIEKKISFEGSFRIEDHFTALNLRCIERLYGDHGLDVTDLIRKNPAAALP 606

Query: 644  VILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEI 703
            VILTRLKQKQ+EW +CR  FN VWA++Y+KN++KSLDHRSFYFKQQDSK+L AK L +EI
Sbjct: 607  VILTRLKQKQDEWTKCREGFNVVWADVYAKNHYKSLDHRSFYFKQQDSKNLSAKVLVSEI 666

Query: 704  KEISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLIKYSCGEMCTT-EQL 762
            K++ EK +KEDDV+L+I+AG R+ I+ HLE+EY D  IHEDL++L+++SC E+C+T EQ+
Sbjct: 667  KDLKEKSQKEDDVVLSISAGYRQPIIRHLEYEYLDRTIHEDLFKLVQFSCEEICSTKEQI 726

Query: 763  DKVMKIWTTFLEPMLGVPSRPQGAEDTEDVVKAKSHTVKSRAASVGDSDGSPDGDAAAMT 822
             KV+++W  FLE MLGV  R +G++  EDVV+ K H+    A + G+++ S   DA ++ 
Sbjct: 727  GKVLRLWANFLELMLGVAPRAKGSDSVEDVVETKHHS----AFTSGEANVS--SDAISLV 780

Query: 823  SKHSNPSRNGDESIPPEQSSSSRAWLPNGDHGIKEDVSVEADHNARKSDNFCDSSEQDKV 882
            S+    + NGDE      S      + N D   KE+   + D + +      +  ++D+ 
Sbjct: 781  SRQLKLATNGDEHASSGVSKHGGTGILNRDSSGKENCK-DGDSSNKDVATCAEKPQKDQE 839

Query: 883  QNNAAMADETSGISKQASTNERLIGT-NAAIAAAADQSNGRSNIENTSGLSVAHSRPGNH 941
              N        G  K++   + ++ T +A+  +  + +NG+    ++SG     S+P   
Sbjct: 840  IGN--------GADKRSRDVDEIVATSSASFPSGVENNNGKVGSRDSSGSRGILSKPSEA 891

Query: 942  IVEGGLELRSSNEILPSSEGGECSRQNISTNGVMTEGAKILRYNAESVKQFKIEREEGEL 1001
            I           + +  ++G +  R  +  NGV ++ +K      ES    KIE+EEGEL
Sbjct: 892  I--------DKVDSIQHTQGVDIGRTIVLANGVHSDTSKANSNYDESGGPSKIEKEEGEL 943

Query: 1002 SPNGDFEEDNFAVYGESGLEAVHK 1025
            SP GD  EDNF VY + GL+   K
Sbjct: 944  SPVGD-SEDNFVVYEDRGLKDTAK 966


>gi|145358042|ref|NP_197006.2| paired amphipathic helix protein Sin3-like 2 [Arabidopsis thaliana]
 gi|296439819|sp|Q9LFQ3.2|SNL2_ARATH RecName: Full=Paired amphipathic helix protein Sin3-like 2
 gi|332004722|gb|AED92105.1| paired amphipathic helix protein Sin3-like 2 [Arabidopsis thaliana]
          Length = 1367

 Score =  910 bits (2351), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 511/1040 (49%), Positives = 675/1040 (64%), Gaps = 90/1040 (8%)

Query: 1    MKRSRDEVYMN-SQIKRPMISSRGEPSGQT----QVVGGGGGGGAQKLTTNDALAYLKAV 55
            MKR RD++Y   SQ KRP+ SSRGE   Q+        G GG   QKLTT+DAL YLK V
Sbjct: 1    MKRIRDDIYATGSQFKRPLGSSRGESYEQSPITGGGSIGEGGINTQKLTTDDALTYLKEV 60

Query: 56   KDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEIT 115
            K++FQD+R+KYD FLEVMKDFKAQ+ DT+GVI+RVKELFKGH +LI GFNTFLPKG+EIT
Sbjct: 61   KEMFQDQRDKYDMFLEVMKDFKAQKTDTSGVISRVKELFKGHNNLIFGFNTFLPKGFEIT 120

Query: 116  LPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQE 175
            L  +D + P KK VEFEEAI+FVNKIKTRFQ ++ VYKSFL+ILNMYRK+NK ITEVY E
Sbjct: 121  L--DDVEAPSKKTVEFEEAISFVNKIKTRFQHNELVYKSFLEILNMYRKDNKDITEVYNE 178

Query: 176  VEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQVHVDK---K 232
            V  LF+DH DLLEEFT FLPDS    +   +   +     DR S  P  R++ ++K   +
Sbjct: 179  VSTLFEDHSDLLEEFTRFLPDSLAPHTEAQLLRSQAQRYDDRGSGPPLVRRMFMEKDRRR 238

Query: 233  ERAMASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERRDDHRRERERDDRDFEND 292
            ER +AS  DRD SVDR D + D+ ++K  +DQR+R +K+          RER  RD E+ 
Sbjct: 239  ERTVASRGDRDHSVDRSDLNDDKSMVKMHRDQRKRVDKDN---------RERRSRDLEDG 289

Query: 293  VNRDFSMQRFPHKRKSARKIEDSTAEPLHQGGEGDENFGMHPVSSSYDDKNAMKSMFSQE 352
                 ++Q F  KRKS+R++E                F  +   +S+ +KN +KSM++Q 
Sbjct: 290  EAEQDNLQHFSEKRKSSRRME---------------GFEAYSGPASHSEKNNLKSMYNQA 334

Query: 353  LSFCEKVKDKL--RDDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLA 410
              FCEKVK++L  +DDYQ FL+CL++++  II R +LQ+LV D+LG++PDLMD FN F  
Sbjct: 335  FLFCEKVKERLCSQDDYQAFLKCLNMFSNGIIQRKDLQNLVSDVLGKFPDLMDEFNQFFE 394

Query: 411  RCEKSEEL--LADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRL 468
            RCE  +    LA VMSKKSL +E  + +SVK E++DR+  R+ +         A+EK+R 
Sbjct: 395  RCESIDGFQHLAGVMSKKSLGSEENLSRSVKGEEKDREHKRDVE--------AAKEKER- 445

Query: 469  DKSVAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRT 528
                               SKDKY+ K IQELDLS+CERCTPSYRLLP +Y IPS   R 
Sbjct: 446  -------------------SKDKYMGKSIQELDLSDCERCTPSYRLLPPDYPIPSVRHRQ 486

Query: 529  ELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVE 588
            + GA VLNDHWVSVTSGSEDYSFKHMR+NQYEESLFRCEDDRFELDMLLESV    K  E
Sbjct: 487  KSGAAVLNDHWVSVTSGSEDYSFKHMRRNQYEESLFRCEDDRFELDMLLESVGSAAKSAE 546

Query: 589  ELLEKINNNTIKTDGPIRVEDHFTALNLRCIERLYGDHGLDVMDVLRKNASLALPVILTR 648
            ELL  I +  I  +G  R+EDHFTALNLRCIERLYGDHGLDV D++RKN + ALPVILTR
Sbjct: 547  ELLNIIIDKKISFEGSFRIEDHFTALNLRCIERLYGDHGLDVTDLIRKNPAAALPVILTR 606

Query: 649  LKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISE 708
            LKQKQ+EW +CR  FN VWA++Y+KN++KSLDHRSFYFKQQDSK+L AKAL +E+K++ E
Sbjct: 607  LKQKQDEWTKCREGFNVVWADVYAKNHYKSLDHRSFYFKQQDSKNLSAKALVSEVKDLKE 666

Query: 709  KKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLIKYSCGEMCTT-EQLDKVMK 767
            K +KEDDV+L+I+AG R+ I+PHLE++Y D  IHEDL++L+++SC E+C+T EQ  KV+K
Sbjct: 667  KSQKEDDVVLSISAGYRQPIIPHLEYDYLDRAIHEDLFKLVQFSCEEICSTKEQTGKVLK 726

Query: 768  IWTTFLEPMLGVPSRPQGAEDTEDVVKAKSHTVKSRAASVGDSDGSPDGDAAAMTSKHSN 827
            +W  FLE ML V  R +G++  EDVV+    T   RA + G+++ S   DA ++ S+   
Sbjct: 727  LWANFLELMLDVAPRAKGSDSVEDVVE----TQHQRAFTSGEANES--SDAISLVSRQLK 780

Query: 828  PSRNGDESIPPEQSSSSRAWLPNGDHGIKEDVSVEADHNARKSDNFCDSSEQDKVQNNAA 887
             + NGD       S      L N D   KE++  + D   +      +  ++D+   N A
Sbjct: 781  FATNGDVHASSGVSKHGETGLLNRDSSGKENLK-DGDLANKDVATCAEKPQKDQEIGNGA 839

Query: 888  MADETSGISKQASTNERLIGTNAAIAAAADQSNGRSNIENTSGLSVAHSRPGNHIVEGGL 947
                     +    +ER+  ++++  +  + +NG+    ++SG     S+P   I     
Sbjct: 840  A-------KRSGDVDERVATSSSSFPSGVENNNGKVGSRDSSGSRGILSKPSEAI----- 887

Query: 948  ELRSSNEILPSSEGGECSRQNISTNGVMTEGAKILRYNAESVKQFKIEREEGELSPNGDF 1007
                  + +  ++G +  R  +  NG+ ++ +K      ES    KIE+EEGELSP GD 
Sbjct: 888  ---DKVDSIQHTQGVDIGRIIVLGNGLQSDTSKANSNYDESGGPSKIEKEEGELSPVGD- 943

Query: 1008 EEDNFAVYGESGLEAVHKAK 1027
             EDNF VY +  L+A  K +
Sbjct: 944  SEDNFVVYEDRELKATAKTE 963


>gi|334187689|ref|NP_001190311.1| paired amphipathic helix protein Sin3-like 2 [Arabidopsis thaliana]
 gi|332004723|gb|AED92106.1| paired amphipathic helix protein Sin3-like 2 [Arabidopsis thaliana]
          Length = 1355

 Score =  909 bits (2349), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 511/1040 (49%), Positives = 675/1040 (64%), Gaps = 90/1040 (8%)

Query: 1    MKRSRDEVYMN-SQIKRPMISSRGEPSGQT----QVVGGGGGGGAQKLTTNDALAYLKAV 55
            MKR RD++Y   SQ KRP+ SSRGE   Q+        G GG   QKLTT+DAL YLK V
Sbjct: 1    MKRIRDDIYATGSQFKRPLGSSRGESYEQSPITGGGSIGEGGINTQKLTTDDALTYLKEV 60

Query: 56   KDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEIT 115
            K++FQD+R+KYD FLEVMKDFKAQ+ DT+GVI+RVKELFKGH +LI GFNTFLPKG+EIT
Sbjct: 61   KEMFQDQRDKYDMFLEVMKDFKAQKTDTSGVISRVKELFKGHNNLIFGFNTFLPKGFEIT 120

Query: 116  LPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQE 175
            L  +D + P KK VEFEEAI+FVNKIKTRFQ ++ VYKSFL+ILNMYRK+NK ITEVY E
Sbjct: 121  L--DDVEAPSKKTVEFEEAISFVNKIKTRFQHNELVYKSFLEILNMYRKDNKDITEVYNE 178

Query: 176  VEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQVHVDK---K 232
            V  LF+DH DLLEEFT FLPDS    +   +   +     DR S  P  R++ ++K   +
Sbjct: 179  VSTLFEDHSDLLEEFTRFLPDSLAPHTEAQLLRSQAQRYDDRGSGPPLVRRMFMEKDRRR 238

Query: 233  ERAMASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERRDDHRRERERDDRDFEND 292
            ER +AS  DRD SVDR D + D+ ++K  +DQR+R +K+          RER  RD E+ 
Sbjct: 239  ERTVASRGDRDHSVDRSDLNDDKSMVKMHRDQRKRVDKDN---------RERRSRDLEDG 289

Query: 293  VNRDFSMQRFPHKRKSARKIEDSTAEPLHQGGEGDENFGMHPVSSSYDDKNAMKSMFSQE 352
                 ++Q F  KRKS+R++E                F  +   +S+ +KN +KSM++Q 
Sbjct: 290  EAEQDNLQHFSEKRKSSRRME---------------GFEAYSGPASHSEKNNLKSMYNQA 334

Query: 353  LSFCEKVKDKL--RDDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLA 410
              FCEKVK++L  +DDYQ FL+CL++++  II R +LQ+LV D+LG++PDLMD FN F  
Sbjct: 335  FLFCEKVKERLCSQDDYQAFLKCLNMFSNGIIQRKDLQNLVSDVLGKFPDLMDEFNQFFE 394

Query: 411  RCEKSEEL--LADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRL 468
            RCE  +    LA VMSKKSL +E  + +SVK E++DR+  R+ +         A+EK+R 
Sbjct: 395  RCESIDGFQHLAGVMSKKSLGSEENLSRSVKGEEKDREHKRDVE--------AAKEKER- 445

Query: 469  DKSVAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRT 528
                               SKDKY+ K IQELDLS+CERCTPSYRLLP +Y IPS   R 
Sbjct: 446  -------------------SKDKYMGKSIQELDLSDCERCTPSYRLLPPDYPIPSVRHRQ 486

Query: 529  ELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVE 588
            + GA VLNDHWVSVTSGSEDYSFKHMR+NQYEESLFRCEDDRFELDMLLESV    K  E
Sbjct: 487  KSGAAVLNDHWVSVTSGSEDYSFKHMRRNQYEESLFRCEDDRFELDMLLESVGSAAKSAE 546

Query: 589  ELLEKINNNTIKTDGPIRVEDHFTALNLRCIERLYGDHGLDVMDVLRKNASLALPVILTR 648
            ELL  I +  I  +G  R+EDHFTALNLRCIERLYGDHGLDV D++RKN + ALPVILTR
Sbjct: 547  ELLNIIIDKKISFEGSFRIEDHFTALNLRCIERLYGDHGLDVTDLIRKNPAAALPVILTR 606

Query: 649  LKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISE 708
            LKQKQ+EW +CR  FN VWA++Y+KN++KSLDHRSFYFKQQDSK+L AKAL +E+K++ E
Sbjct: 607  LKQKQDEWTKCREGFNVVWADVYAKNHYKSLDHRSFYFKQQDSKNLSAKALVSEVKDLKE 666

Query: 709  KKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLIKYSCGEMCTT-EQLDKVMK 767
            K +KEDDV+L+I+AG R+ I+PHLE++Y D  IHEDL++L+++SC E+C+T EQ  KV+K
Sbjct: 667  KSQKEDDVVLSISAGYRQPIIPHLEYDYLDRAIHEDLFKLVQFSCEEICSTKEQTGKVLK 726

Query: 768  IWTTFLEPMLGVPSRPQGAEDTEDVVKAKSHTVKSRAASVGDSDGSPDGDAAAMTSKHSN 827
            +W  FLE ML V  R +G++  EDVV+    T   RA + G+++ S   DA ++ S+   
Sbjct: 727  LWANFLELMLDVAPRAKGSDSVEDVVE----TQHQRAFTSGEANES--SDAISLVSRQLK 780

Query: 828  PSRNGDESIPPEQSSSSRAWLPNGDHGIKEDVSVEADHNARKSDNFCDSSEQDKVQNNAA 887
             + NGD       S      L N D   KE++  + D   +      +  ++D+   N A
Sbjct: 781  FATNGDVHASSGVSKHGETGLLNRDSSGKENLK-DGDLANKDVATCAEKPQKDQEIGNGA 839

Query: 888  MADETSGISKQASTNERLIGTNAAIAAAADQSNGRSNIENTSGLSVAHSRPGNHIVEGGL 947
                     +    +ER+  ++++  +  + +NG+    ++SG     S+P   I     
Sbjct: 840  A-------KRSGDVDERVATSSSSFPSGVENNNGKVGSRDSSGSRGILSKPSEAI----- 887

Query: 948  ELRSSNEILPSSEGGECSRQNISTNGVMTEGAKILRYNAESVKQFKIEREEGELSPNGDF 1007
                  + +  ++G +  R  +  NG+ ++ +K      ES    KIE+EEGELSP GD 
Sbjct: 888  ---DKVDSIQHTQGVDIGRIIVLGNGLQSDTSKANSNYDESGGPSKIEKEEGELSPVGD- 943

Query: 1008 EEDNFAVYGESGLEAVHKAK 1027
             EDNF VY +  L+A  K +
Sbjct: 944  SEDNFVVYEDRELKATAKTE 963


>gi|79386570|ref|NP_186781.4| paired amphipathic helix protein Sin3-like 1 [Arabidopsis thaliana]
 gi|296439818|sp|Q9SRH9.2|SNL1_ARATH RecName: Full=Paired amphipathic helix protein Sin3-like 1
 gi|332640118|gb|AEE73639.1| paired amphipathic helix protein Sin3-like 1 [Arabidopsis thaliana]
          Length = 1372

 Score =  899 bits (2324), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 512/1053 (48%), Positives = 681/1053 (64%), Gaps = 90/1053 (8%)

Query: 1    MKRSRDEVYMN-SQIKRPMISSRGEPSGQTQVVGGGGGGG---------AQKLTTNDALA 50
            MKR RD+VY + SQ +RP+ SSRG+  GQ+ V G G             +QKLTTNDAL+
Sbjct: 1    MKRIRDDVYASGSQFRRPLGSSRGQLCGQSPVHGSGDTEEEEEGGSRRVSQKLTTNDALS 60

Query: 51   YLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPK 110
            YL+ VK++FQD+REKYD FLEVMKDFKAQR DT GVIARVKELFKGH +LI GFNTFLPK
Sbjct: 61   YLREVKEMFQDQREKYDRFLEVMKDFKAQRTDTGGVIARVKELFKGHNNLIYGFNTFLPK 120

Query: 111  GYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSIT 170
            GYEITL +E++   PKK VEFE+AINFVNKIK RF+ D+HVYKSFL+ILNMYRKENK I 
Sbjct: 121  GYEITL-IEEDDALPKKTVEFEQAINFVNKIKMRFKHDEHVYKSFLEILNMYRKENKEIK 179

Query: 171  EVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQVHVD 230
            EVY EV  LFQ H DLLE+FT FLP S  + S       +     DR S  P   Q+ V+
Sbjct: 180  EVYNEVSILFQGHLDLLEQFTRFLPASLPSHSAAQHSRSQAQQYSDRGSDPPLLHQMQVE 239

Query: 231  K---KERAMASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERRDDHRRERERDDR 287
            K   +ERA+A   D   SV+R D + D+ ++K  ++QR+R +KE    +  RR R+ DDR
Sbjct: 240  KERRRERAVALRGD--YSVERYDLNDDKTMVKIQREQRKRLDKE----NRARRGRDLDDR 293

Query: 288  DFENDVNRDFSMQRFPHKRKSARKIEDSTAEPLHQGGEGDENFGMHPVSSSYDDKNAMKS 347
            +   D     ++  FP KRKS+R+ E   A               +  S+S+ +K+ +KS
Sbjct: 294  EAGQD-----NLHHFPEKRKSSRRAEALEA---------------YSGSASHSEKDNLKS 333

Query: 348  MFSQELSFCEKVKDKL--RDDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGF 405
            M+ Q   FCEKVKD+L  +DDYQ FL+CL++++  II R +LQ+LV DLLG++PDLMD F
Sbjct: 334  MYKQAFVFCEKVKDRLCSQDDYQTFLKCLNIFSNGIIQRKDLQNLVSDLLGKFPDLMDEF 393

Query: 406  NGFLARCEKSE---ELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREA 462
            N F  RCE      + LA VMSKK   +E ++ + +KVE+++ +   E +  VK+ ++  
Sbjct: 394  NQFFERCESITDGFQRLAGVMSKKLFSSEEQLSRPMKVEEKESEHKPELE-AVKETEQ-- 450

Query: 463  REKDRLDKSVAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIP 522
                                      K +Y+ K IQELDLS+CE CTPSYRLLP +Y IP
Sbjct: 451  -------------------------CKKEYMGKSIQELDLSDCECCTPSYRLLPADYPIP 485

Query: 523  SASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNV 582
             ASQR+ELGAEVLNDHWVSVTSGSEDYSFKHMR+NQYEESLFRCEDDRFELDMLLESV+ 
Sbjct: 486  IASQRSELGAEVLNDHWVSVTSGSEDYSFKHMRRNQYEESLFRCEDDRFELDMLLESVSS 545

Query: 583  TTKRVEELLEKINNNTIKTDGPIRVEDHFTALNLRCIERLYGDHGLDVMDVLRKNASLAL 642
              +  E LL  I    I   G  R+EDHFTALNLRCIERLYGDHGLDV+D+L KN + AL
Sbjct: 546  AARSAESLLNIITEKKISFSGSFRIEDHFTALNLRCIERLYGDHGLDVIDILNKNPATAL 605

Query: 643  PVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAE 702
            PVILTRLKQKQ EW +CR DF+KVWA +Y+KN++KSLDHRSFYFKQQDSK+L AK+L AE
Sbjct: 606  PVILTRLKQKQGEWKKCRDDFDKVWANVYAKNHYKSLDHRSFYFKQQDSKNLSAKSLLAE 665

Query: 703  IKEISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLIKYSCGEMCTT-EQ 761
            IKE+ EK + +DDVLL+I+AG R+ I P+LE+EY +  IHED+++++++SC E+C+T EQ
Sbjct: 666  IKELKEKSQNDDDVLLSISAGYRQPINPNLEYEYLNRAIHEDMFKVVQFSCEELCSTKEQ 725

Query: 762  LDKVMKIWTTFLEPMLGVPSRPQGAEDTEDVV-KAKSHTVKSRAASVGDSDGSPDGDAAA 820
            L KV+++W  FLE +LGVP R +G +  EDVV   K+  V    +  G++  S  GD A 
Sbjct: 726  LSKVLRLWENFLEAVLGVPPRAKGTDLVEDVVINPKTLDVNHSTSPNGEAAVSSGGDTAR 785

Query: 821  MTSKHSNPSRNGDESIPPEQSSSSRAW-----LPNGDHGIKEDVSVEADHNARKSDNFCD 875
            + S+    + NGDE      +SSS  +     L N D   KE+  +E    A +    C 
Sbjct: 786  LASRKLKSAANGDE------NSSSGTFKHGIGLLNKDSTGKEN--LEDVEIANRDGVACS 837

Query: 876  SSEQDKVQNNAAMADETSGISKQASTNERLIGTNAAIAAAADQSNGRSNIENTSGLSVAH 935
            + +  K Q     A++  G       +ER   ++ +I + A+ ++     E   G     
Sbjct: 838  AVKPQKEQETGNEAEKRFGKPIPMDISERAAISSISIPSGAENNHCVVGKEVLPGAHEIQ 897

Query: 936  SRPGNHIVEGGLELRSSNEILPSSEGGECSRQNISTNGVMTEGAKILRYNAESVKQFKIE 995
            ++P + + +   ++  S E + S++GG+     +  NG+ ++ +K  R + +     + E
Sbjct: 898  AKPSDTLTDIHHDV-DSIETVHSTQGGDVGNSIVLANGLRSDSSKGTRNSDDPEGPSRNE 956

Query: 996  REEGELSPNGDFEEDNFAVYGESGLEAVHKAKD 1028
            +EEGELSPNGDF EDNF VY + G+++  K ++
Sbjct: 957  KEEGELSPNGDF-EDNFGVYKDHGVKSTSKPEN 988


>gi|9755669|emb|CAC01821.1| transcriptional regulatory-like protein [Arabidopsis thaliana]
          Length = 1377

 Score =  891 bits (2302), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 510/1074 (47%), Positives = 675/1074 (62%), Gaps = 124/1074 (11%)

Query: 1    MKRSRDEVYMN-SQIKRPMISSRGEPSGQT----QVVGGGGGGGAQKLTTNDALAYLKAV 55
            MKR RD++Y   SQ KRP+ SSRGE   Q+        G GG   QKLTT+DAL YLK V
Sbjct: 1    MKRIRDDIYATGSQFKRPLGSSRGESYEQSPITGGGSIGEGGINTQKLTTDDALTYLKEV 60

Query: 56   KDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEIT 115
            K++FQD+R+KYD FLEVMKDFKAQ+ DT+GVI+RVKELFKGH +LI GFNTFLPKG+EIT
Sbjct: 61   KEMFQDQRDKYDMFLEVMKDFKAQKTDTSGVISRVKELFKGHNNLIFGFNTFLPKGFEIT 120

Query: 116  LPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQE 175
            L  +D + P KK VEFEEAI+FVNKIKTRFQ ++ VYKSFL+ILNMYRK+NK ITEVY E
Sbjct: 121  L--DDVEAPSKKTVEFEEAISFVNKIKTRFQHNELVYKSFLEILNMYRKDNKDITEVYNE 178

Query: 176  VEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQVHVDK---K 232
            V  LF+DH DLLEEFT FLPDS    +   +   +     DR S  P  R++ ++K   +
Sbjct: 179  VSTLFEDHSDLLEEFTRFLPDSLAPHTEAQLLRSQAQRYDDRGSGPPLVRRMFMEKDRRR 238

Query: 233  ERAMASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERRDDHRRERERDDRDFEND 292
            ER +AS  DRD SVDR D + D+ ++K  +DQR+R +K+          RER  RD E+ 
Sbjct: 239  ERTVASRGDRDHSVDRSDLNDDKSMVKMHRDQRKRVDKDN---------RERRSRDLEDG 289

Query: 293  VNRDFSMQRFPHKRKSARKIEDSTAEPLHQGGEGDENFGMHPVSSSYDDKNAMKSMFSQE 352
                 ++Q F  KRKS+R++E                F  +   +S+ +KN +KSM++Q 
Sbjct: 290  EAEQDNLQHFSEKRKSSRRME---------------GFEAYSGPASHSEKNNLKSMYNQA 334

Query: 353  LSFCEKVKDKL--RDDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLA 410
              FCEKVK++L  +DDYQ FL+CL++++  II R +LQ+LV D+LG++PDLMD FN F  
Sbjct: 335  FLFCEKVKERLCSQDDYQAFLKCLNMFSNGIIQRKDLQNLVSDVLGKFPDLMDEFNQFFE 394

Query: 411  RCEKSEEL--LADVMSK----------------------------------KSLWNEGRI 434
            RCE  +    LA VMSK                                  +SL +E  +
Sbjct: 395  RCESIDGFQHLAGVMSKSRQQSPSFLSMSILFSFFSYVIGIEITLPGTLAAESLGSEENL 454

Query: 435  PKSVKVEDRDRDRDRERDDGVKDRDREAREKDRLDKSVAFVNKDVGPKMSMYSSKDKYLA 494
             +SVK E++DR+  R+ +         A+EK+R                    SKDKY+ 
Sbjct: 455  SRSVKGEEKDREHKRDVE--------AAKEKER--------------------SKDKYMG 486

Query: 495  KPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHM 554
            K IQELDLS+CERCTPSYRLLP +Y IPS   R + GA VLNDHWVSVTSGSEDYSFKHM
Sbjct: 487  KSIQELDLSDCERCTPSYRLLPPDYPIPSVRHRQKSGAAVLNDHWVSVTSGSEDYSFKHM 546

Query: 555  RKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFTAL 614
            R+NQYEESLFRCEDDRFELDMLLESV    K  EELL  I +  I  +G  R+EDHFTAL
Sbjct: 547  RRNQYEESLFRCEDDRFELDMLLESVGSAAKSAEELLNIIIDKKISFEGSFRIEDHFTAL 606

Query: 615  NLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKN 674
            NLRCIERLYGDHGLDV D++RKN + ALPVILTRLKQKQ+EW +CR  FN VWA++Y+KN
Sbjct: 607  NLRCIERLYGDHGLDVTDLIRKNPAAALPVILTRLKQKQDEWTKCREGFNVVWADVYAKN 666

Query: 675  YHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEF 734
            ++KSLDHRSFYFKQQDSK+L AKAL +E+K++ EK +KEDDV+L+I+AG R+ I+PHLE+
Sbjct: 667  HYKSLDHRSFYFKQQDSKNLSAKALVSEVKDLKEKSQKEDDVVLSISAGYRQPIIPHLEY 726

Query: 735  EYSDPDIHEDLYQLIKYSCGEMCTT-EQLDKVMKIWTTFLEPMLGVPSRPQGAEDTEDVV 793
            +Y D  IHEDL++L+++SC E+C+T EQ  KV+K+W  FLE ML V  R +G++  EDVV
Sbjct: 727  DYLDRAIHEDLFKLVQFSCEEICSTKEQTGKVLKLWANFLELMLDVAPRAKGSDSVEDVV 786

Query: 794  KAKSHTVKSRAASVGDSDGSPDGDAAAMTSKHSNPSRNGDESIPPEQSSSSRAWLPNGDH 853
            +    T   RA + G+++ S   DA ++ S+    + NGD       S      L N D 
Sbjct: 787  E----TQHQRAFTSGEANES--SDAISLVSRQLKFATNGDVHASSGVSKHGETGLLNRDS 840

Query: 854  GIKEDVSVEADHNARKSDNFCDSSEQDKVQNNAAMADETSGISKQASTNERLIGTNAAIA 913
              KE++  + D   +      +  ++D+   N A         +    +ER+  ++++  
Sbjct: 841  SGKENLK-DGDLANKDVATCAEKPQKDQEIGNGAA-------KRSGDVDERVATSSSSFP 892

Query: 914  AAADQSNGRSNIENTSGLSVAHSRPGNHIVEGGLELRSSNEILPSSEGGECSRQNISTNG 973
            +  + +NG+    ++SG     S+P   I           + +  ++G +  R  +  NG
Sbjct: 893  SGVENNNGKVGSRDSSGSRGILSKPSEAI--------DKVDSIQHTQGVDIGRIIVLGNG 944

Query: 974  VMTEGAKILRYNAESVKQFKIEREEGELSPNGDFEEDNFAVYGESGLEAVHKAK 1027
            + ++ +K      ES    KIE+EEGELSP GD  EDNF VY +  L+A  K +
Sbjct: 945  LQSDTSKANSNYDESGGPSKIEKEEGELSPVGD-SEDNFVVYEDRELKATAKTE 997


>gi|334185014|ref|NP_001189789.1| paired amphipathic helix protein Sin3-like 1 [Arabidopsis thaliana]
 gi|332640119|gb|AEE73640.1| paired amphipathic helix protein Sin3-like 1 [Arabidopsis thaliana]
          Length = 1360

 Score =  886 bits (2289), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 509/1053 (48%), Positives = 672/1053 (63%), Gaps = 102/1053 (9%)

Query: 1    MKRSRDEVYMN-SQIKRPMISSRGEPSGQTQVVGGGGGGG---------AQKLTTNDALA 50
            MKR RD+VY + SQ +RP+ SSRG+  GQ+ V G G             +QKLTTNDAL+
Sbjct: 1    MKRIRDDVYASGSQFRRPLGSSRGQLCGQSPVHGSGDTEEEEEGGSRRVSQKLTTNDALS 60

Query: 51   YLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPK 110
            YL+ VK++FQD+REKYD FLEVMKDFKAQR DT GVIARVKELFKGH +LI GFNTFLPK
Sbjct: 61   YLREVKEMFQDQREKYDRFLEVMKDFKAQRTDTGGVIARVKELFKGHNNLIYGFNTFLPK 120

Query: 111  GYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSIT 170
            GYEITL +E++   PKK VEFE+AINFVNKIK RF+ D+HVYKSFL+ILNMYRKENK I 
Sbjct: 121  GYEITL-IEEDDALPKKTVEFEQAINFVNKIKMRFKHDEHVYKSFLEILNMYRKENKEIK 179

Query: 171  EVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQVHVD 230
            EVY EV  LFQ H DLLE+FT FLP S  + S       +     DR S  P   Q+ V+
Sbjct: 180  EVYNEVSILFQGHLDLLEQFTRFLPASLPSHSAAQHSRSQAQQYSDRGSDPPLLHQMQVE 239

Query: 231  K---KERAMASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERRDDHRRERERDDR 287
            K   +ERA+A   D   SV+R D + D+ ++K  ++QR+R +KE    +  RR R+ DDR
Sbjct: 240  KERRRERAVALRGD--YSVERYDLNDDKTMVKIQREQRKRLDKE----NRARRGRDLDDR 293

Query: 288  DFENDVNRDFSMQRFPHKRKSARKIEDSTAEPLHQGGEGDENFGMHPVSSSYDDKNAMKS 347
            +   D     ++  FP KRKS+R+     AE L                       A   
Sbjct: 294  EAGQD-----NLHHFPEKRKSSRR-----AEALE----------------------AYSG 321

Query: 348  MFSQELSFCEKVKDKL--RDDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGF 405
            M+ Q   FCEKVKD+L  +DDYQ FL+CL++++  II R +LQ+LV DLLG++PDLMD F
Sbjct: 322  MYKQAFVFCEKVKDRLCSQDDYQTFLKCLNIFSNGIIQRKDLQNLVSDLLGKFPDLMDEF 381

Query: 406  NGFLARCEKSE---ELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREA 462
            N F  RCE      + LA VMSKK   +E ++ + +KVE+++ +   E +  VK+ ++  
Sbjct: 382  NQFFERCESITDGFQRLAGVMSKKLFSSEEQLSRPMKVEEKESEHKPELE-AVKETEQ-- 438

Query: 463  REKDRLDKSVAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIP 522
                                      K +Y+ K IQELDLS+CE CTPSYRLLP +Y IP
Sbjct: 439  -------------------------CKKEYMGKSIQELDLSDCECCTPSYRLLPADYPIP 473

Query: 523  SASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNV 582
             ASQR+ELGAEVLNDHWVSVTSGSEDYSFKHMR+NQYEESLFRCEDDRFELDMLLESV+ 
Sbjct: 474  IASQRSELGAEVLNDHWVSVTSGSEDYSFKHMRRNQYEESLFRCEDDRFELDMLLESVSS 533

Query: 583  TTKRVEELLEKINNNTIKTDGPIRVEDHFTALNLRCIERLYGDHGLDVMDVLRKNASLAL 642
              +  E LL  I    I   G  R+EDHFTALNLRCIERLYGDHGLDV+D+L KN + AL
Sbjct: 534  AARSAESLLNIITEKKISFSGSFRIEDHFTALNLRCIERLYGDHGLDVIDILNKNPATAL 593

Query: 643  PVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAE 702
            PVILTRLKQKQ EW +CR DF+KVWA +Y+KN++KSLDHRSFYFKQQDSK+L AK+L AE
Sbjct: 594  PVILTRLKQKQGEWKKCRDDFDKVWANVYAKNHYKSLDHRSFYFKQQDSKNLSAKSLLAE 653

Query: 703  IKEISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLIKYSCGEMCTT-EQ 761
            IKE+ EK + +DDVLL+I+AG R+ I P+LE+EY +  IHED+++++++SC E+C+T EQ
Sbjct: 654  IKELKEKSQNDDDVLLSISAGYRQPINPNLEYEYLNRAIHEDMFKVVQFSCEELCSTKEQ 713

Query: 762  LDKVMKIWTTFLEPMLGVPSRPQGAEDTEDVV-KAKSHTVKSRAASVGDSDGSPDGDAAA 820
            L KV+++W  FLE +LGVP R +G +  EDVV   K+  V    +  G++  S  GD A 
Sbjct: 714  LSKVLRLWENFLEAVLGVPPRAKGTDLVEDVVINPKTLDVNHSTSPNGEAAVSSGGDTAR 773

Query: 821  MTSKHSNPSRNGDESIPPEQSSSSRAW-----LPNGDHGIKEDVSVEADHNARKSDNFCD 875
            + S+    + NGDE      +SSS  +     L N D   KE+  +E    A +    C 
Sbjct: 774  LASRKLKSAANGDE------NSSSGTFKHGIGLLNKDSTGKEN--LEDVEIANRDGVACS 825

Query: 876  SSEQDKVQNNAAMADETSGISKQASTNERLIGTNAAIAAAADQSNGRSNIENTSGLSVAH 935
            + +  K Q     A++  G       +ER   ++ +I + A+ ++     E   G     
Sbjct: 826  AVKPQKEQETGNEAEKRFGKPIPMDISERAAISSISIPSGAENNHCVVGKEVLPGAHEIQ 885

Query: 936  SRPGNHIVEGGLELRSSNEILPSSEGGECSRQNISTNGVMTEGAKILRYNAESVKQFKIE 995
            ++P + + +   ++  S E + S++GG+     +  NG+ ++ +K  R + +     + E
Sbjct: 886  AKPSDTLTDIHHDV-DSIETVHSTQGGDVGNSIVLANGLRSDSSKGTRNSDDPEGPSRNE 944

Query: 996  REEGELSPNGDFEEDNFAVYGESGLEAVHKAKD 1028
            +EEGELSPNGDF EDNF VY + G+++  K ++
Sbjct: 945  KEEGELSPNGDF-EDNFGVYKDHGVKSTSKPEN 976


>gi|6094552|gb|AAF03494.1|AC010676_4 unknown protein [Arabidopsis thaliana]
          Length = 1324

 Score =  873 bits (2255), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 512/1057 (48%), Positives = 658/1057 (62%), Gaps = 153/1057 (14%)

Query: 1    MKRSRDEVYMN-SQIKRPMISSRGEPSGQTQVVGGGGGGG---------AQKLTTNDALA 50
            MKR RD+VY + SQ +RP+ SSRG+  GQ+ V G G             +QKLTTNDAL+
Sbjct: 1    MKRIRDDVYASGSQFRRPLGSSRGQLCGQSPVHGSGDTEEEEEGGSRRVSQKLTTNDALS 60

Query: 51   YLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPK 110
            YL+ VK++FQD+REKYD FLEVMKDFKAQR DT GVIARVKELFKGH +LI GFNTFLPK
Sbjct: 61   YLREVKEMFQDQREKYDRFLEVMKDFKAQRTDTGGVIARVKELFKGHNNLIYGFNTFLPK 120

Query: 111  GYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSIT 170
            GYEITL +E++   PKK VEFE+AINFVNKIK RF+ D+HVYKSFL+ILNMYRKENK I 
Sbjct: 121  GYEITL-IEEDDALPKKTVEFEQAINFVNKIKMRFKHDEHVYKSFLEILNMYRKENKEIK 179

Query: 171  EVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQVHVD 230
            EVY EV  LFQ H DLLE+FT FLP S  + S       +     DR S  P   Q+ V+
Sbjct: 180  EVYNEVSILFQGHLDLLEQFTRFLPASLPSHSAAQHSRSQAQQYSDRGSDPPLLHQMQVE 239

Query: 231  K---KERAMASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERRDDHRRERERDDR 287
            K   +ERA+A   D   SV+R D + D+ ++K  ++QR+R +KE    +  RR R+ DDR
Sbjct: 240  KERRRERAVALRGD--YSVERYDLNDDKTMVKIQREQRKRLDKE----NRARRGRDLDDR 293

Query: 288  DFENDVNRDFSMQRFPHKRKSARKIEDSTAEPLHQGGEGDENFGMHPVSSSYDDKNAMKS 347
            +   D     ++  FP KRKS+R+ E   A               +  S+S+ +K+ +KS
Sbjct: 294  EAGQD-----NLHHFPEKRKSSRRAEALEA---------------YSGSASHSEKDNLKS 333

Query: 348  MFSQELSFCEKVKDKL--RDDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGF 405
            M+ Q   FCEKVKD+L  +DDYQ FL+CL++++  II R +LQ+LV DLLG++PDLMD F
Sbjct: 334  MYKQAFVFCEKVKDRLCSQDDYQTFLKCLNIFSNGIIQRKDLQNLVSDLLGKFPDLMDEF 393

Query: 406  NGFLARCEKSE-------ELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDR 458
            N F  RCE          + LA VMSKK   +E ++ + +KVE+++ +   E +  VK+ 
Sbjct: 394  NQFFERCESITGTEIHGFQRLAGVMSKKLFSSEEQLSRPMKVEEKESEHKPELE-AVKET 452

Query: 459  DREAREKDRLDKSVAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKN 518
            ++                            K +Y+ K IQELDLS+CE CTPSYRLLP +
Sbjct: 453  EQ---------------------------CKKEYMGKSIQELDLSDCECCTPSYRLLPAD 485

Query: 519  YLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLE 578
            Y IP ASQR+ELGAEVLNDHWVSVTSGSEDYSFKHMR+NQYEESLFRCEDDRFELDMLLE
Sbjct: 486  YPIPIASQRSELGAEVLNDHWVSVTSGSEDYSFKHMRRNQYEESLFRCEDDRFELDMLLE 545

Query: 579  SVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFTALNLRCIERLYGDHGLDVMDVLRKNA 638
            SV+   +  E LL  I    I   G  R+EDHFTALNLRCIERLYGDHGLDV+D+L KN 
Sbjct: 546  SVSSAARSAESLLNIITEKKISFSGSFRIEDHFTALNLRCIERLYGDHGLDVIDILNKNP 605

Query: 639  SLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKA 698
            + ALPVILTRLKQKQ EW +CR DF+KVWA +Y+KN++KSLDHRSFYFKQQDSK+L AK+
Sbjct: 606  ATALPVILTRLKQKQGEWKKCRDDFDKVWANVYAKNHYKSLDHRSFYFKQQDSKNLSAKS 665

Query: 699  LSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLIKYSCGEMCT 758
            L AEIKE+ EK + +DDVLL+I+AG R+ I P+LE+EY +  IHED+++++++SC E+C+
Sbjct: 666  LLAEIKELKEKSQNDDDVLLSISAGYRQPINPNLEYEYLNRAIHEDMFKVVQFSCEELCS 725

Query: 759  T-EQLDKVMKIWTTFLEPMLGVPSRPQGAEDTEDVV-KAKSHTVKSRAASVGDSDGSPDG 816
            T EQL KV+++W  FLE +LGVP R +G +  EDVV   K+  V    +  G++  S  G
Sbjct: 726  TKEQLSKVLRLWENFLEAVLGVPPRAKGTDLVEDVVINPKTLDVNHSTSPNGEAAVSSGG 785

Query: 817  DAAAMTSKHSNPSRNGDESIPPEQSSSSRAW-----LPNGDHGIKEDVSVEADHNARKSD 871
            D A + S+    + NGDE      +SSS  +     L N D   KE+  +E    A +  
Sbjct: 786  DTARLASRKLKSAANGDE------NSSSGTFKHGIGLLNKDSTGKEN--LEDVEIANRDG 837

Query: 872  NFCDSSEQDKVQNNAAMADETSGISKQASTNERLIGTNAAIAAAADQSNGRSNIENTSGL 931
              C + +  K Q     A++  G       +ER     AAI                S +
Sbjct: 838  VACSAVKPQKEQETGNEAEKRFGKPIPMDISER-----AAI----------------SSI 876

Query: 932  SVAHSRPGNHIVEGGLELRSSNEILPSSEGGECSRQNISTNGVMTEGAKILRYNAESVKQ 991
            S+      NH V G        E+LP       SR                         
Sbjct: 877  SIPSGAENNHCVVG-------KEVLPGP-----SRN------------------------ 900

Query: 992  FKIEREEGELSPNGDFEEDNFAVYGESGLEAVHKAKD 1028
               E+EEGELSPNGDF EDNF VY + G+++  K ++
Sbjct: 901  ---EKEEGELSPNGDF-EDNFGVYKDHGVKSTSKPEN 933


>gi|52076211|dbj|BAD44865.1| transcriptional co-repressor -like [Oryza sativa Japonica Group]
          Length = 1243

 Score =  850 bits (2196), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 479/876 (54%), Positives = 605/876 (69%), Gaps = 67/876 (7%)

Query: 161  MYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRD-RSS 219
            MYRK+NKSI +VY EV  LF DH DLLEEF HFLPD+S       V   R  I RD R+S
Sbjct: 1    MYRKDNKSIQDVYHEVAVLFADHKDLLEEFQHFLPDTS--VPPQAVAPSRPGIRRDDRTS 58

Query: 220  AMPTARQVHVDKKERAMASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERRDDHR 279
             +P A +   +K+++A   HADR+ SVDRPD DH  V+      QRRR  K+R   D   
Sbjct: 59   LVPPASRN--EKRDKAHP-HADRE-SVDRPDLDH--VI------QRRR-PKDRHDYDRGD 105

Query: 280  RERERDDRDFENDVNRDFSMQRFPHKRKSARKIEDSTAEPLHQGGEGDENFGMHPVSSS- 338
            ++ E D +D       D  ++R P      RK+ED T+   H GG   EN G+   S+S 
Sbjct: 106  KDGELDSKDL------DIGLKRKPF----PRKMEDPTSADAHHGGPL-ENHGILGASASL 154

Query: 339  YDDKNAMKSMFSQELSFCEKVKDKLRDD-YQEFLRCLHLYTKEIITRSELQSLVGDLLGR 397
            YD+K+A+KS+++QE  FCEKVK+KL  D YQEFL+CLH+Y++EIITRSEL++LV D+L +
Sbjct: 155  YDNKDALKSVYTQEFHFCEKVKEKLEHDAYQEFLKCLHIYSQEIITRSELKNLVNDILQQ 214

Query: 398  YPDLMDGFNGFLARCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKD 457
            +PDLMDGFN FL  CE  +  LA V SK+     GRI   VK E        ER +G K 
Sbjct: 215  HPDLMDGFNEFLEHCENIDGFLAGVFSKRQT---GRI---VKTE--------ERKEGGKG 260

Query: 458  RDREAREKDRLDKSVAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPK 517
             ++E    DR++K  A+  K+   +  ++SSK+KY+ KP+ ELDLSNC+RCTPSYRLLPK
Sbjct: 261  TEKEP---DRIEKVPAY--KEAPSQKPVFSSKEKYIYKPVSELDLSNCQRCTPSYRLLPK 315

Query: 518  NYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLL 577
            +Y +P A  +TELGA VLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLL
Sbjct: 316  HYPMPPAGNKTELGASVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLL 375

Query: 578  ESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFTALNLRCIERLYGDHGLDVMDVLRKN 637
            ESVN  TKRVEEL+EK+ +N++K D PIR+++H T LNLRCIERLYGDHGLDVMDVLRKN
Sbjct: 376  ESVNAATKRVEELIEKMQDNSLKPDSPIRIDEHLTPLNLRCIERLYGDHGLDVMDVLRKN 435

Query: 638  ASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAK 697
            AS+ALPVILTRLKQKQEEW+RCRSDFNKVWAEIY+KNYHKSLDHRSFYFKQQD+K+L  K
Sbjct: 436  ASVALPVILTRLKQKQEEWSRCRSDFNKVWAEIYAKNYHKSLDHRSFYFKQQDTKNLSTK 495

Query: 698  ALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLIKYSCGEMC 757
            +L  EIKEI+EKKRKEDDVLLAIAAGNRR IVP++ F+Y D +IHED+Y++IKYSCGE+C
Sbjct: 496  SLLTEIKEINEKKRKEDDVLLAIAAGNRRPIVPNMSFDYVDSNIHEDMYKIIKYSCGEVC 555

Query: 758  -TTEQLDKVMKIWTTFLEPMLGVPSRPQGAEDTEDVVKAKSHTVKSRAASVGDSDGSPDG 816
             +++QLDKV++IWTTFLEP+LGV  R  GAED  D VK KS T KS  A+VG+ + +   
Sbjct: 556  SSSDQLDKVVRIWTTFLEPILGVQPRTHGAEDA-DAVKPKSRTTKSGLATVGEINTT--- 611

Query: 817  DAAAMTSKHSNPSRNGDESIPPEQSSSSRAWLPNGDHGIKEDVSVEADHNARKSDNFCDS 876
             AA   +KH +     DE+IP EQ+ SS A + NG     ++   + D  AR+++   ++
Sbjct: 612  -AAGAVAKHGH-----DENIPQEQTPSSLARMVNGVATDTQNGFHDVDRTARRAEEPSNT 665

Query: 877  SEQDKVQNNAAMADETSGISKQASTNERLIGTNAAIAAAADQSNGRSNIENTSGLSVAH- 935
            +   +VQ  +   +E   +S Q    ER    N  +A      N ++N+E TSG++ +  
Sbjct: 666  AVNGRVQGASPGTNEIPAVSTQNMPTER-SAENIPVARTEQHGNAKANLEPTSGVNASRS 724

Query: 936  SRPGNHIVEGGLELRSSNEILPSSEGGECSRQNISTN-GVMTEGAKILRYNAESVKQF-- 992
            S  GN   +   E R+ NE LPS EGGE  R   + N G  +EG K   +N  S      
Sbjct: 725  SHAGN---DTAAEARAGNETLPSVEGGETGRSGSTLNGGGASEGNKGRLFNEASASHNTP 781

Query: 993  KIEREEGELSPNGDFEEDNFAVYGESGLEAVHKAKD 1028
            K+EREEGELSPNGDFEEDNFA + +  ++ V KAK+
Sbjct: 782  KVEREEGELSPNGDFEEDNFAPFEDGAVDGVSKAKE 817



 Score = 43.5 bits (101), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 2/64 (3%)

Query: 131 FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEF 190
           + +  +F  K+K + + D   Y+ FL  L++Y +E  + +E+   V  + Q HPDL++ F
Sbjct: 165 YTQEFHFCEKVKEKLEHD--AYQEFLKCLHIYSQEIITRSELKNLVNDILQQHPDLMDGF 222

Query: 191 THFL 194
             FL
Sbjct: 223 NEFL 226


>gi|218187368|gb|EEC69795.1| hypothetical protein OsI_00086 [Oryza sativa Indica Group]
          Length = 1360

 Score =  835 bits (2156), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 479/926 (51%), Positives = 617/926 (66%), Gaps = 89/926 (9%)

Query: 133  EAINFVNKIKTRFQGDDHVYKSFLDILNMYRKEN----------KSITEVYQE------- 175
            +A+ ++  +K +FQ     Y+ FL+++  ++ E           K++   Y E       
Sbjct: 68   DALVYLKAVKDKFQDKREKYEEFLEVMRDFKSERIDTNGVIIRVKTLFNGYPELILGFNT 127

Query: 176  -----VEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRD-RSSAMPTARQVHV 229
                 V  LF DH DLLEEF HFLPD+S       V   R  I RD R+S +P A +   
Sbjct: 128  FLPQGVAVLFADHKDLLEEFQHFLPDTS--VPPQAVAPSRPGIRRDDRTSLVPPASRN-- 183

Query: 230  DKKERAMASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERRDDHRRERERDDRDF 289
            +K+++A   HADR+ SVDRPD DH  V+      QRRR  K+R   D   ++ E D +D 
Sbjct: 184  EKRDKAHP-HADRE-SVDRPDLDH--VI------QRRR-PKDRHDYDRGDKDGELDSKDL 232

Query: 290  ENDVNRDFSMQRFPHKRKSARKIEDSTAEPLHQGGEGDENFGMHPVSSS-YDDKNAMKSM 348
                  D  ++R P      RK+ED T+   H GG   EN G+   S+S YD+K+A+KS+
Sbjct: 233  ------DIGLKRKPF----PRKMEDPTSADAHHGGPL-ENHGILGASASLYDNKDALKSV 281

Query: 349  FSQELSFCEKVKDKLRDD-YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNG 407
            ++QE  FCEKVK+KL  D YQEFL+CLH+Y++EIITRSEL++LV D+L ++PDLMDGFN 
Sbjct: 282  YTQEFHFCEKVKEKLEHDAYQEFLKCLHIYSQEIITRSELKNLVNDILQQHPDLMDGFNE 341

Query: 408  FLARCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDR 467
            FL  CE  +  LA V SK+     GRI   VK E        ER +G K  ++E    DR
Sbjct: 342  FLEHCENIDGFLAGVFSKRQT---GRI---VKTE--------ERKEGGKGTEKEP---DR 384

Query: 468  LDKSVAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQR 527
            ++K  A+  K+   +  ++SSK+KY+ KP+ ELDLSNC+RCTPSYRLLPK+Y +P A  +
Sbjct: 385  IEKVPAY--KEAPSQKPVFSSKEKYIYKPVSELDLSNCQRCTPSYRLLPKHYPMPPAGNK 442

Query: 528  TELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRV 587
            TELGA VLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVN  TKRV
Sbjct: 443  TELGASVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNAATKRV 502

Query: 588  EELLEKINNNTIKTDGPIRVEDHFTALNLRCIERLYGDHGLDVMDVLRKNASLALPVILT 647
            EEL+EK+ +N++K D PIR+++H T LNLRCIERLYGDHGLDVMDVLRKNAS+ALPVILT
Sbjct: 503  EELIEKMQDNSLKPDSPIRIDEHLTPLNLRCIERLYGDHGLDVMDVLRKNASVALPVILT 562

Query: 648  RLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEIS 707
            RLKQKQEEW+RCRSDFNKVWAEIY+KNYHKSLDHRSFYFKQQD+K+L  K+L  EIKEI+
Sbjct: 563  RLKQKQEEWSRCRSDFNKVWAEIYAKNYHKSLDHRSFYFKQQDTKNLSTKSLLTEIKEIN 622

Query: 708  EKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLIKYSCGEMC-TTEQLDKVM 766
            EKKRKEDDVLLAIAAGNRR IVP++ F+Y D +IHED+Y++IKYSCGE+C +++QLDKV+
Sbjct: 623  EKKRKEDDVLLAIAAGNRRPIVPNMSFDYVDSNIHEDMYKIIKYSCGEVCSSSDQLDKVV 682

Query: 767  KIWTTFLEPMLGVPSRPQGAEDTEDVVKAKSHTVKSRAASVGDSDGSPDGDAAAMTSKHS 826
            +IWTTFLEP+LGV  R  GAED  D VK KS T KS  A+VG+ + +    AA   +KH 
Sbjct: 683  RIWTTFLEPILGVQPRTHGAEDA-DAVKPKSRTTKSGLATVGEINTT----AAGAVAKHG 737

Query: 827  NPSRNGDESIPPEQSSSSRAWLPNGDHGIKEDVSVEADHNARKSDNFCDSSEQDKVQNNA 886
            +     DE+IP EQ+ SS A + NG     ++   + D  AR+++   +++   +VQ  +
Sbjct: 738  H-----DENIPQEQTPSSLARMVNGVATDTQNGFHDVDRTARRAEEPSNTAVNGRVQGAS 792

Query: 887  AMADETSGISKQASTNERLIGTNAAIAAAADQSNGRSNIENTSGLSVAH-SRPGNHIVEG 945
               +E   +S Q    ER    N  +A      N ++N+E TSG++ +  S  GN   + 
Sbjct: 793  PGTNEIPAVSTQNMPTER-SAENIPVARTEQHGNAKANLEPTSGVNASRSSHAGN---DT 848

Query: 946  GLELRSSNEILPSSEGGECSRQNISTN-GVMTEGAKILRYNAESVKQF--KIEREEGELS 1002
              E R+ NE LPS EGGE  R   + N G  +EG K   +N  S      K+EREEGELS
Sbjct: 849  AAEARAGNETLPSVEGGETGRSGSTLNGGGASEGNKGRLFNEASASHNTPKVEREEGELS 908

Query: 1003 PNGDFEEDNFAVYGESGLEAVHKAKD 1028
            PNGDFEEDNFA + +  ++ V KAK+
Sbjct: 909  PNGDFEEDNFAPFEDGAVDGVSKAKE 934



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 73/138 (52%), Positives = 89/138 (64%), Gaps = 23/138 (16%)

Query: 1   MKRSRDEVYMNSQIKRPMISSRGEPSGQTQVV----------------------GGGGGG 38
           MKR+RD+  M SQ+KRP +  R +P+ Q Q +                        GG  
Sbjct: 1   MKRARDDALMGSQLKRPNVG-RSDPTAQPQHMPLGPASAAAPPPQAAAAPPAQPPAGGAT 59

Query: 39  GAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHR 98
             QKLTTNDAL YLKAVKD FQDKREKY++FLEVM+DFK++RIDT GVI RVK LF G+ 
Sbjct: 60  AGQKLTTNDALVYLKAVKDKFQDKREKYEEFLEVMRDFKSERIDTNGVIIRVKTLFNGYP 119

Query: 99  DLILGFNTFLPKGYEITL 116
           +LILGFNTFLP+G  +  
Sbjct: 120 ELILGFNTFLPQGVAVLF 137


>gi|218195906|gb|EEC78333.1| hypothetical protein OsI_18074 [Oryza sativa Indica Group]
          Length = 1177

 Score =  831 bits (2146), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 439/720 (60%), Positives = 522/720 (72%), Gaps = 61/720 (8%)

Query: 34  GGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKEL 93
           G G    QKLTTNDAL YLKAVKD FQDKR+KYD+FLEVM+DFK+ RIDTAGVI RVK L
Sbjct: 12  GQGPSQNQKLTTNDALLYLKAVKDKFQDKRDKYDEFLEVMRDFKSGRIDTAGVIIRVKTL 71

Query: 94  FKGHRDLILGFNTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYK 153
           F GH +LILGFN FLPKG+ I L     Q   KKPV+F EAINFVNKIK RFQ +DHVYK
Sbjct: 72  FNGHHELILGFNAFLPKGFAIKL-----QDLEKKPVDFMEAINFVNKIKARFQQEDHVYK 126

Query: 154 SFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSI 213
           SFL ILNMYR  NKSI +VY EV ALF+D+PDLLEEF HFLPD+S A     VP G +S 
Sbjct: 127 SFLGILNMYRLHNKSIQDVYGEVAALFRDYPDLLEEFKHFLPDTSTAPEPVTVPRGVSSR 186

Query: 214 LRDRSSAMPTARQVHVDKKERAMASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERE 273
             DR   MP+AR   + K+ERA  S  DRD S+DRPDP+        D   RRR +K R+
Sbjct: 187 HDDRGPLMPSARNAQIIKRERAYPSTVDRDFSIDRPDPE--------DDPHRRRVDKGRD 238

Query: 274 -RRDDHRRERERDDRDFENDVNRDFSMQRFPHKRKSARKIEDSTAEPLHQGGEGDENFGM 332
            + D  R++ E D +D E D       QR   KRK ARK++ + A+   QG       G+
Sbjct: 239 GKVDRSRKDYETDVKDVEYDSKDLDGGQR---KRKLARKMDGALAD-TQQG-------GV 287

Query: 333 HPVSSSYDDKNAMKSMFSQELSFCEKVKDKLRDD-YQEFLRCLHLYTKEIITRSELQSLV 391
              +S YDDK+A+KS +++E  FCEKVKDKL  + YQEFL+CLH+Y++EIITRSEL++LV
Sbjct: 288 STSTSPYDDKDALKSAYTKEFRFCEKVKDKLEPEAYQEFLKCLHIYSQEIITRSELKNLV 347

Query: 392 GDLLGRYPDLMDGFNGFLARCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRER 451
            D+L  YPDLM+GFN FL +CE  +  L  V +K+      +  + VK+           
Sbjct: 348 NDILQHYPDLMNGFNDFLEQCENIDAFLEGVFNKR------QTSQIVKI----------- 390

Query: 452 DDGVKDRDREAREKDRLDKSVAFVNKDVGP-KMSMYSSKDKY-LAKPIQELDLSNCERCT 509
                           ++K  A  +K+    K + +SSKDKY L KPI ELDLSNC+RCT
Sbjct: 391 ----------------VEKGSALNSKEGATHKATTFSSKDKYNLCKPISELDLSNCQRCT 434

Query: 510 PSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDD 569
           PSYRLLPKNY +P AS RT+LGA VLND WVSVTSGSEDYSFKHMRKNQYEESLFRCEDD
Sbjct: 435 PSYRLLPKNYPMPPASCRTDLGASVLNDLWVSVTSGSEDYSFKHMRKNQYEESLFRCEDD 494

Query: 570 RFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFTALNLRCIERLYGDHGLD 629
           RFELDMLLESV V  KRVEEL+EK+ + +I  D PIR+++H+T LNLRCIERLYGDHGLD
Sbjct: 495 RFELDMLLESVIVAIKRVEELIEKMQDYSIIPDSPIRIDEHWTPLNLRCIERLYGDHGLD 554

Query: 630 VMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQ 689
           VMDVLR+NAS+ALPVILTRLKQKQEEW+    DFNKVWAEIY+KNYHKS+DHRSFYFKQQ
Sbjct: 555 VMDVLRQNASVALPVILTRLKQKQEEWSSAGPDFNKVWAEIYAKNYHKSVDHRSFYFKQQ 614

Query: 690 DSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLI 749
           D+K+L  KAL A IKE++EKKRKEDD+LL IA+GNRR IVP++ FEY DP+IHEDLYQ+I
Sbjct: 615 DTKNLSTKALLAAIKEVNEKKRKEDDMLLTIASGNRRPIVPNMSFEYVDPEIHEDLYQII 674


>gi|413942472|gb|AFW75121.1| hypothetical protein ZEAMMB73_072928 [Zea mays]
          Length = 1248

 Score =  794 bits (2050), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 436/813 (53%), Positives = 565/813 (69%), Gaps = 58/813 (7%)

Query: 35  GGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELF 94
           G G G+  LTT DALAYLKAVKD FQ+KR  Y+ F++VM+DFK+ R+D+ GVIARVK +F
Sbjct: 15  GNGSGSGSLTTRDALAYLKAVKDKFQEKRHTYEQFIQVMRDFKSDRLDSTGVIARVKTIF 74

Query: 95  KGHRDLILGFNTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKS 154
            G+ DLILGFN FLPK + I  PL+  +   KKPV++  AI+ VN+IK+RFQ ++HVYKS
Sbjct: 75  HGYPDLILGFNAFLPKEHAIR-PLDLRED--KKPVDYPRAISLVNRIKSRFQQEEHVYKS 131

Query: 155 FLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSIL 214
           FL ILN YR  NK I +VY EV AL   HPDLLEEF+HFLPD+          +G  + +
Sbjct: 132 FLGILNKYRMHNKPIQDVYNEVTALLHGHPDLLEEFSHFLPDTPMPPP----QAGTTTKV 187

Query: 215 R--DRSSAMPTARQVHVDKKERAMASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKER 272
           R  D ++ M +  +    ++ R   S AD D S DR D +HD         Q+   EKE+
Sbjct: 188 RHDDNNAIMHSVTRAQTVQRGRDFPSTADWDTSADRLDLEHDI--------QKSCIEKEK 239

Query: 273 ERRD---DHRRERERDDRDFENDVNRDFSMQRFPHKRKSARKIEDSTAEPLHQGGEGDEN 329
            R      HRR  +R++++ E + N D  +++  HK  S RK+E          G GD+ 
Sbjct: 240 IRDACPRQHRRGYKRNEKNDEYE-NEDLDVEQCGHK--SQRKME----------GTGDDT 286

Query: 330 FGMHPVSSSYDDKNAMKSMFSQELSFCEKVKDKLRDD-YQEFLRCLHLYTKEIITRSELQ 388
            G     SS++ K  +KS  +QE  FCEK+K  L  + YQEFL+CLH+Y ++IITR+EL+
Sbjct: 287 PG-DATLSSFNCKYVVKSSHAQEFQFCEKLKAHLEPEAYQEFLKCLHIYNQDIITRNELK 345

Query: 389 SLVGDLLGRYPDLMDGFNGFLARCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRD 448
            LV D+L  YPDL++GFN FL  CE  +  L    +K+      +  + V+  +++R ++
Sbjct: 346 RLVKDILQHYPDLVNGFNDFLGHCENIDGFLEGTFNKR------QTSRMVRPVEKERYKE 399

Query: 449 RERD-DGVKDRDREAREKDRLDKSVAFVNKD-VGPKMSMYSSKDKY-LAKPIQELDLSNC 505
            E D D  K+R +E++  +R+   + F +K+    + S + SK+KY L KPI ELDLSNC
Sbjct: 400 NEGDSDPEKERYKESKNSERV---LTFNSKEGAAHEASTFPSKEKYNLCKPISELDLSNC 456

Query: 506 ERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFR 565
           +RCTPSYRLLPKNY +PSAS RT+  A VLND WVSVTSGSEDYSFKHMRKNQYEESLFR
Sbjct: 457 QRCTPSYRLLPKNYPVPSASNRTDTEASVLNDRWVSVTSGSEDYSFKHMRKNQYEESLFR 516

Query: 566 CEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFTALNLRCIERLYGD 625
           CEDD FELDMLLESV V  +RVE+L+E++  N++K D  I +++H T+LN+RCIERLYGD
Sbjct: 517 CEDDMFELDMLLESVTVAIERVEKLVERMEGNSLKPDSSISLDEHLTSLNMRCIERLYGD 576

Query: 626 HGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFY 685
           HGLDV+DVLRKN  + LPVILTRLKQKQEEW+RC+SDFNKVWAE+YSKNYHKSLDHRSFY
Sbjct: 577 HGLDVIDVLRKNVGVTLPVILTRLKQKQEEWSRCQSDFNKVWAEVYSKNYHKSLDHRSFY 636

Query: 686 FKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDL 745
           FKQQD+K+L  KAL ++IKEISEK RK DDVLLAIAAGNR  +V ++ F Y D DIHEDL
Sbjct: 637 FKQQDTKNLNTKALLSQIKEISEKNRKGDDVLLAIAAGNRWPLVANMSFVYLDMDIHEDL 696

Query: 746 YQLIKYSCGEMC-TTEQLDKVMKIWTTFLEPMLGVPSRPQGAEDTEDVVKAKSHTVKSRA 804
           YQ+IKYSCGE+C +++Q++KVM+IWTTFLEP+LG+  R  GAED  D+VK+     K R 
Sbjct: 697 YQIIKYSCGELCNSSDQVNKVMRIWTTFLEPLLGIHHRAHGAEDA-DMVKS-----KRRT 750

Query: 805 ASVGDSDGSPDGDAAAMTSKHSNPSRN-GDESI 836
             VG + G    +AAA   K  N S++ G ES+
Sbjct: 751 REVGLACGGKTNNAAA---KGGNGSKSAGAESV 780



 Score = 40.8 bits (94), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 8/85 (9%)

Query: 943  VEGGLELRSSNEILPSSEGGECSRQNISTNGVMTEGAKILRYNAESVKQ--FKIEREEGE 1000
             E   E    NE +PS +  +  R  I++      G  +  ++A SV     + E EEGE
Sbjct: 777  AESVAEFMGRNETIPSMKSIKHDR--ITS----LYGVGVHPFSAYSVSHNNLRPETEEGE 830

Query: 1001 LSPNGDFEEDNFAVYGESGLEAVHK 1025
            LSPNGDF+E++F V+ +  ++   K
Sbjct: 831  LSPNGDFKEEHFCVFEDEAVDGTSK 855


>gi|356524089|ref|XP_003530665.1| PREDICTED: paired amphipathic helix protein Sin3-like 3-like
           [Glycine max]
          Length = 925

 Score =  770 bits (1989), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 401/652 (61%), Positives = 480/652 (73%), Gaps = 55/652 (8%)

Query: 38  GGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGH 97
           G  Q  TT DALA+LKAV+D FQDKREKYD F+ +MKDFKAQRIDT GV+ RV+ELFKGH
Sbjct: 4   GDGQIPTTKDALAFLKAVEDAFQDKREKYDYFMVIMKDFKAQRIDTIGVMERVEELFKGH 63

Query: 98  RDLILGFNTFLPKGYEITLPLEDEQPPPKKPVEF-EEAINFVNKIKTRFQGDDHVYKSFL 156
           +DLILGFNTFLPKGY+I LPLEDEQPP KK +E  EEAINFV KIK RF  +D VYKSF 
Sbjct: 64  KDLILGFNTFLPKGYKIILPLEDEQPPQKKLIELKEEAINFVGKIKARFHDNDRVYKSFQ 123

Query: 157 DILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRD 216
           +I  M RKE KSITE+YQEV ALFQ H DLLEEF HFLPD  G  S  Y  S +NS+L D
Sbjct: 124 NIC-MCRKETKSITEIYQEVSALFQGHADLLEEFNHFLPDIPGTTSTQYA-SVQNSLLHD 181

Query: 217 RSSAMPTARQVHVDKKERAMASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERE-RR 275
           RSSAMPT RQ+HV+K+ER +ASH D DLS D PDP+ D  L+ +DKDQRRRG KE + R+
Sbjct: 182 RSSAMPTIRQMHVEKRERNIASHGDHDLSADHPDPELDSCLMMADKDQRRRGAKENDCRK 241

Query: 276 DDHRRERERDDRDFENDVNRDFSMQRFPHKRKSARKIEDSTAEPLHQGGEGDENFGMHPV 335
              RRE+ERDD D+++D +R    +   HKRKS  + EDS AE             MHP+
Sbjct: 242 GRDRREQERDDGDYDHDGSR----EHLSHKRKSGCRAEDSGAE------------SMHPI 285

Query: 336 SSSYDDKNAMKSMFSQELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGD 393
           S + +D +++KSM S    + EKVK+KL++   +QEFL+ L++Y+ EIITR ELQSLVG+
Sbjct: 286 SYACEDISSLKSMCSPVFGYLEKVKEKLQNPEVFQEFLKYLYIYSMEIITRQELQSLVGN 345

Query: 394 LLGRYPDLMDGFNGFLARCEKSEEL-----LADVMSKKSLWNEGRIPKSVKVEDRDRDRD 448
           +LG+Y DL++GF+ FL +CEK+        L  V S +  W+EG  PK +KVEDRD+DRD
Sbjct: 346 ILGKYADLIEGFDEFLDQCEKNASCCGPKNLTVVYSSEIFWHEGHGPKPMKVEDRDQDRD 405

Query: 449 RERDDGVKDRDREAREKDRLDKSVAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERC 508
               D ++ RDR+  E+D                        KY  KPI ELDLSNCE+C
Sbjct: 406 ----DKMEKRDRKCLERD------------------------KYAMKPINELDLSNCEQC 437

Query: 509 TPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCED 568
           TPSYRLLPK Y I  AS RTEL AEVLND+WVSVTSGSEDYSFKH  KNQYE+S+FRCED
Sbjct: 438 TPSYRLLPKQYPILPASDRTELDAEVLNDNWVSVTSGSEDYSFKHRYKNQYEDSMFRCED 497

Query: 569 DRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFTALNLRCIERLYGDHGL 628
           DR+ELDMLLESVN TTK+VE+ LEKIN N IK   PIR+E+H TALNLRCIE++YGDHGL
Sbjct: 498 DRYELDMLLESVNATTKQVEDFLEKINANIIKGYCPIRIEEHLTALNLRCIEQIYGDHGL 557

Query: 629 DVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLD 680
           DV+D L+KNA LALPVILTRLKQKQ+EWAR R+DFNKVW+E Y+K +HKSLD
Sbjct: 558 DVVDALKKNALLALPVILTRLKQKQDEWARSRADFNKVWSETYAKYHHKSLD 609



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/129 (36%), Positives = 76/129 (58%), Gaps = 3/129 (2%)

Query: 834 ESIPPEQSSSSRAWLPNGDHGIKEDVSVEADHNARKSDN--FCDSSEQDKVQNNAAMADE 891
           ES+  E+S+S +     GD+ ++ED S+++D +A K++   F  S++  ++   A   DE
Sbjct: 643 ESVLLEESNSCKQRQTIGDNKVEEDNSLDSDCSAHKTETETFGSSTQHGQMHLIATNLDE 702

Query: 892 TSGISKQASTNERLIGTNAAIAAAADQSNGRSNIENTSGLSVA-HSRPGNHIVEGGLELR 950
            S   KQ  + +RL+  N ++++  +QSN R+N+ N SGL+    SRPGN   EGGL+L 
Sbjct: 703 ISRAKKQDHSIDRLVNANVSMSSGMEQSNRRTNVGNASGLTATPPSRPGNVSNEGGLDLP 762

Query: 951 SSNEILPSS 959
           S  E L  S
Sbjct: 763 SLEETLSQS 771


>gi|242089117|ref|XP_002440391.1| hypothetical protein SORBIDRAFT_09g000200 [Sorghum bicolor]
 gi|241945676|gb|EES18821.1| hypothetical protein SORBIDRAFT_09g000200 [Sorghum bicolor]
          Length = 1243

 Score =  765 bits (1975), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 436/809 (53%), Positives = 559/809 (69%), Gaps = 70/809 (8%)

Query: 44  TTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILG 103
           TT DALAYLKAVKD FQ+K   Y+ F+EVM+DFK  R+D+AGVIARVK LF G+ DLILG
Sbjct: 22  TTRDALAYLKAVKDRFQEKPHMYEQFIEVMRDFKTNRLDSAGVIARVKTLFHGYPDLILG 81

Query: 104 FNTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYR 163
           FN FLPKG+ I    +D     K+PV++  AI  VN+IK+RFQ  +HVYKSFL ILNMYR
Sbjct: 82  FNAFLPKGHSIRR--QDILHKDKEPVDYPRAITLVNRIKSRFQQQEHVYKSFLWILNMYR 139

Query: 164 KENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPS--GRNSILR--DRSS 219
             NK I +VY EV  L  DHPDLLEEF HFLPD+      H  P+     S LR  D+++
Sbjct: 140 MHNKPIQDVYDEVTLLLHDHPDLLEEFIHFLPDT------HTPPTKAATTSKLRHDDKNA 193

Query: 220 AMPTARQVHVDKKERAMASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKER---ERRD 276
            M +A + H  ++ERA +S AD D +VDR D + D         ++R  EKE+    RR 
Sbjct: 194 VMHSATRPHTVQRERAFSSTADWDSNVDRLDLERDI--------KKRCTEKEKIRNARRS 245

Query: 277 DHRRERERDDRDFENDVNRDFSMQRFPHKRKSARKIEDSTAEPLHQGGEGDENFG---MH 333
            HRR  +R++++ E + N DF  +R  +K  S  K+E+         G GD+  G   M 
Sbjct: 246 QHRRGYKRNEKNDEYE-NEDFDAERCGYK--SQTKMEE---------GTGDDTIGGATMS 293

Query: 334 PVSSSYDDKNAMKSMFSQELSFCEKVKDKLRDD-YQEFLRCLHLYTKEIITRSELQSLVG 392
           P S             +QE  FCE VK ++  + YQEFL+CLH+Y++EIITRSEL+ LV 
Sbjct: 294 PFS--------FNCSHTQEFQFCEIVKAQIEPEAYQEFLKCLHIYSQEIITRSELKRLVK 345

Query: 393 DLLGRYPDLMDGFNGFLARCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERD 452
           D+L  YPDL++GFN FL  CE  +  L    +K+      + P+ VK  ++ RD++ + D
Sbjct: 346 DILQHYPDLVNGFNDFLGHCENIDGFLEGTFNKR------QTPRMVKPVEKKRDKEHKGD 399

Query: 453 -DGVKDRDREAREKDRLDKSVAFVNKD-VGPKMSMYSSKDKY-LAKPIQELDLSNCERCT 509
            D  K+R    +E+++ +K + F +K+    +++   SK+KY L KPI ELDLSNC+RCT
Sbjct: 400 SDPEKER---YKEREKSEKVLVFNSKEGATHEVTASPSKEKYNLCKPISELDLSNCQRCT 456

Query: 510 PSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDD 569
           PSYRLLP+NY +PSAS RT+  A VLND WVSVTSGSEDYS KHMRKNQYEESLFRCEDD
Sbjct: 457 PSYRLLPENYQVPSASNRTDTEASVLNDLWVSVTSGSEDYSSKHMRKNQYEESLFRCEDD 516

Query: 570 RFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFTALNLRCIERLYGDHGLD 629
           RFELDMLLESV V  KRVE+L+E++  N++K D  I +++H T LN+RCIERLYGDHGLD
Sbjct: 517 RFELDMLLESVTVAIKRVEKLVERMEGNSLKLDSSIHLDEHLTTLNMRCIERLYGDHGLD 576

Query: 630 VMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQ 689
           V+DVL+ N  + LPVILTRL+QKQEEW+RC+SDFNKVWAE+YSK YHKSLDHRSFYFKQQ
Sbjct: 577 VVDVLQNNIGVTLPVILTRLRQKQEEWSRCQSDFNKVWAEVYSKIYHKSLDHRSFYFKQQ 636

Query: 690 DSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLI 749
           D K+L  KAL ++IKEISEK RK DDVL AIAAGNR  +VP++ FEY D DIHEDLYQ+I
Sbjct: 637 DKKNLNTKALLSQIKEISEKNRKGDDVLPAIAAGNRWPLVPNMSFEYVDLDIHEDLYQII 696

Query: 750 KYSCGEMC-TTEQLDKVMKIWTTFLEPMLGVPSRPQGAEDTEDVVKAKSHTVKSRAASVG 808
           KYSCGE+C +++Q++KVM+IWTTFLEP+LG+  R  G ED  D+VK++  T K     VG
Sbjct: 697 KYSCGELCSSSDQVNKVMRIWTTFLEPLLGIHLRAHGTEDA-DMVKSERRTRK-----VG 750

Query: 809 DSDGSPDGDAAAMTSKHSNPSRN-GDESI 836
            + G    +A   T+K  N S++ G ES+
Sbjct: 751 LACGWKRNNA---TAKGGNGSKSAGAESV 776



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 89/209 (42%), Gaps = 20/209 (9%)

Query: 826  SNPSRNGDESIPPEQSSSSRAWLPNG-----DHGIKEDVSVEADHNARKSDNFCDSSEQD 880
            S  +R GD+ +P   + +    +PN      D  I ED+     ++  +    C SS+Q 
Sbjct: 654  SEKNRKGDDVLPAIAAGNRWPLVPNMSFEYVDLDIHEDLYQIIKYSCGE---LCSSSDQ- 709

Query: 881  KVQNNAAMADETSGISKQASTNERLIGTNAAIAAAADQSNGRSNIENTSGLSVAHSRPGN 940
                N  M   T+ +      + R  GT  A    +++   +  +      + A ++ GN
Sbjct: 710  ---VNKVMRIWTTFLEPLLGIHLRAHGTEDADMVKSERRTRKVGLACGWKRNNATAKGGN 766

Query: 941  HIVEGGLE----LRSSNEILPSSEGGECSRQNISTNGVMTEGAKILRYNAESVKQFKIER 996
                 G E       +NE +PS+     SR++     +   G       + S    + ER
Sbjct: 767  GSKSAGAESVAEFVGTNETIPSTR----SRKHGRMTSLYGVGVHPFNEYSGSHNNLRPER 822

Query: 997  EEGELSPNGDFEEDNFAVYGESGLEAVHK 1025
            EEGELSPNGDFEE+NF V+ +  ++   K
Sbjct: 823  EEGELSPNGDFEEENFGVFEDEAIDGTSK 851


>gi|302788846|ref|XP_002976192.1| hypothetical protein SELMODRAFT_443104 [Selaginella moellendorffii]
 gi|300156468|gb|EFJ23097.1| hypothetical protein SELMODRAFT_443104 [Selaginella moellendorffii]
          Length = 1941

 Score =  761 bits (1966), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 416/800 (52%), Positives = 537/800 (67%), Gaps = 93/800 (11%)

Query: 1   MKRSRDEVYMNSQIKRPMISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQ 60
           MKR+R++     Q+KR    + GE S Q             +LTT DA+ YLKAVK+ F+
Sbjct: 1   MKRAREDSTSGPQLKR----TAGESSEQP------------RLTTEDAMLYLKAVKEKFK 44

Query: 61  DKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLED 120
           D   KY +FLEVMKDFKAQRIDT+GVIA+VK+LFKGH  LILGFNTFLPK Y+I LP E 
Sbjct: 45  DDNGKYAEFLEVMKDFKAQRIDTSGVIAKVKDLFKGHNKLILGFNTFLPKNYQIVLPEEK 104

Query: 121 EQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALF 180
           +QP     VEF++AINFVNKIK RF  ++HVYK+FL+ILN YRK  KSI EVY EV +LF
Sbjct: 105 KQP-----VEFDQAINFVNKIKNRFNDNEHVYKAFLEILNKYRKGTKSINEVYDEVASLF 159

Query: 181 QDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTAR--QVHVDKKERAMAS 238
           +DHPDLL+EFT FLPD+  A    +     N    ++    P+ R  Q  V KKE     
Sbjct: 160 RDHPDLLDEFTRFLPDTGNAVQTSFRQGTSNQRKEEKG---PSGRSSQYPVIKKET---- 212

Query: 239 HADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERRDDHRRERERDDRDFENDVNRDFS 298
                          +R  LK++K+ RR+ E+ER+R D+H R+R+++D D +     D  
Sbjct: 213 ---------------ERSSLKAEKEHRRKLERERDRNDEHERDRDKEDLDRD-----DLD 252

Query: 299 MQRFPHKRKSARKIEDSTAEPLHQGGEGDENFGMHPVSSSYDDKNAMKSMFSQELSFCEK 358
            QR PHKRKSAR+  D       Q  EG         S+  D             +F EK
Sbjct: 253 GQRLPHKRKSARRA-DELIRKQSQTAEG--------TSTQID------------YAFFEK 291

Query: 359 VKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLARCEKSE 416
           VK +LR  D Y+E ++ ++LYT++II R EL S   D+LG++PDL++GFN FL + E +E
Sbjct: 292 VKGRLRNRDSYKELIKIINLYTEQIINRGELHSFATDILGKHPDLLEGFNNFL-QGENAE 350

Query: 417 ELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRLDKSVAFVN 476
             L  V +++ L +EG     V  + RD+D DRE+D   KDRD++   K+R      + +
Sbjct: 351 GCLGGVFARR-LESEG-----VASKGRDKDHDREKD-WEKDRDKD---KER------YAS 394

Query: 477 KDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLN 536
              G KMS+  SKDK+  KPI ELDLSNCE CTPSYRLLPKNY    ++ R EL   VLN
Sbjct: 395 DKTGQKMSLLPSKDKFTNKPISELDLSNCETCTPSYRLLPKNYPRLPSNHRNELANSVLN 454

Query: 537 DHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINN 596
           D WVSVTSGSED SFKHMR+NQYEESLFRCEDDRFELDMLLES  +T KRV EL+EK+++
Sbjct: 455 DSWVSVTSGSEDSSFKHMRRNQYEESLFRCEDDRFELDMLLESTALTAKRVGELVEKLDS 514

Query: 597 NTIKTDGPIRVEDHFTALNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEW 656
             +  D  IR++D+ +A+NLRCIER+YGDHGLD++D++RKNAS  L V+  RL+QK+EEW
Sbjct: 515 GQL--DPSIRIDDYLSAINLRCIERIYGDHGLDIIDLMRKNASSVLAVVHCRLRQKEEEW 572

Query: 657 ARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDV 716
           A+CR+D NKVWAE+Y+KNYHKSLDHRSFYFKQQD KSL +K L AEIK++ EKKRKED+ 
Sbjct: 573 AKCRADMNKVWAEVYTKNYHKSLDHRSFYFKQQDKKSLSSKGLLAEIKDVHEKKRKEDES 632

Query: 717 LLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLIKYSCGEMCTT-EQLDKVMKIWTTFLEP 775
           +L +  GN+R   P ++F Y D  IHEDL+Q++KYS  E+C T EQ DK+M++WT  LE 
Sbjct: 633 VLHLIMGNKRLPTPDMKFGYPDSSIHEDLFQIMKYSADEVCNTMEQSDKIMRVWTMSLEL 692

Query: 776 MLGVPSRPQGAEDTEDVVKA 795
           + GVP RP+G +DTE+ V+A
Sbjct: 693 LFGVPPRPRGTDDTEEAVRA 712


>gi|302769538|ref|XP_002968188.1| hypothetical protein SELMODRAFT_440352 [Selaginella moellendorffii]
 gi|300163832|gb|EFJ30442.1| hypothetical protein SELMODRAFT_440352 [Selaginella moellendorffii]
          Length = 1935

 Score =  758 bits (1958), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 414/800 (51%), Positives = 529/800 (66%), Gaps = 103/800 (12%)

Query: 1   MKRSRDEVYMNSQIKRPMISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQ 60
           MKR R++     Q+KR    + GE S Q             +LTT DA+ YLKAVK+ F+
Sbjct: 1   MKRGREDSTSGPQLKR----TAGESSEQP------------RLTTEDAMLYLKAVKEKFK 44

Query: 61  DKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLED 120
           D   KY +FLEVMKDFKAQRIDT+GVIA+VK+LFKGH  LILGFNTFLPK Y+I LP E 
Sbjct: 45  DDNGKYAEFLEVMKDFKAQRIDTSGVIAKVKDLFKGHNKLILGFNTFLPKNYQIVLPEEK 104

Query: 121 EQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALF 180
           +QP     VEF++AINFVNKIK RF  ++HVYK+FL+ILN YRK  KSI EVY EV +LF
Sbjct: 105 KQP-----VEFDQAINFVNKIKNRFNDNEHVYKAFLEILNKYRKGTKSINEVYDEVASLF 159

Query: 181 QDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTAR--QVHVDKKERAMAS 238
           +DHPDLL+EFT FLPD+  A    +     N    ++    P+ R  Q  V KKE     
Sbjct: 160 RDHPDLLDEFTRFLPDTGNAVQTSFRQGTSNQRKEEKG---PSGRSSQYPVIKKET---- 212

Query: 239 HADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERRDDHRRERERDDRDFENDVNRDFS 298
                          +R  LK++K+ RR+ E+ER+R D+H R+R+++D D +     D  
Sbjct: 213 ---------------ERSSLKAEKEHRRKLERERDRNDEHERDRDKEDLDRD-----DLD 252

Query: 299 MQRFPHKRKSARKIEDSTAEPLHQGGEGDENFGMHPVSSSYDDKNAMKSMFSQELSFCEK 358
            QR PHKRKSAR+  D       Q  EG         S+  D             +F EK
Sbjct: 253 GQRLPHKRKSARRA-DELIRKQSQTAEG--------TSTQID------------YAFFEK 291

Query: 359 VKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLARCEKSE 416
           VK +LR  D Y+E ++ L+LYT++II R EL S   D+LG++PDL++GFN FL +CE   
Sbjct: 292 VKGRLRNRDSYKELIKILNLYTEQIINRGELHSFATDILGKHPDLLEGFNNFL-QCE--- 347

Query: 417 ELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRLDKSVAFVN 476
                        N G   + V  + RD+D DRE+D   KDRD++   K+R      + +
Sbjct: 348 -------------NAGLESEGVASKGRDKDHDREKD-WEKDRDKD---KER------YAS 384

Query: 477 KDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLN 536
              G KMS+  SKDK+  KPI ELDLSNCE CTPSYRLLPKNY    ++ R EL   VLN
Sbjct: 385 DKTGQKMSLLPSKDKFTNKPISELDLSNCETCTPSYRLLPKNYPRLPSNHRNELANSVLN 444

Query: 537 DHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINN 596
           D WVSVTSGSED SFKHMR+NQYEESLFRCEDDRFELDMLLES  +T KRV EL+EK+++
Sbjct: 445 DSWVSVTSGSEDSSFKHMRRNQYEESLFRCEDDRFELDMLLESTALTAKRVGELVEKLDS 504

Query: 597 NTIKTDGPIRVEDHFTALNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEW 656
             +  D  IR++D+ +A+NLRCIER+YGDHGLD++D++RKNAS  L V+  RL+QK+EEW
Sbjct: 505 GQL--DPSIRIDDYLSAINLRCIERIYGDHGLDIIDLMRKNASSVLAVVHCRLRQKEEEW 562

Query: 657 ARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDV 716
           A+CR+D NKVWAE+Y+KNYHKSLDHRSFYFKQQD KSL +K L AEIK++ EKKRKED+ 
Sbjct: 563 AKCRADMNKVWAEVYTKNYHKSLDHRSFYFKQQDKKSLSSKGLLAEIKDVHEKKRKEDES 622

Query: 717 LLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLIKYSCGEMCTT-EQLDKVMKIWTTFLEP 775
           +L +  GN+R   P ++F Y D  IHEDL+Q++KYS  E+C T EQ DK+M++WT  LE 
Sbjct: 623 VLHLIMGNKRLPTPDMKFGYPDSSIHEDLFQIMKYSADEVCNTMEQSDKIMRVWTMSLEL 682

Query: 776 MLGVPSRPQGAEDTEDVVKA 795
           + GVP RP+G +DTE+ V+A
Sbjct: 683 LFGVPPRPRGTDDTEEAVRA 702


>gi|168048824|ref|XP_001776865.1| histone deacetylase complex, SIN3 component [Physcomitrella patens
            subsp. patens]
 gi|162671721|gb|EDQ58268.1| histone deacetylase complex, SIN3 component [Physcomitrella patens
            subsp. patens]
          Length = 1500

 Score =  753 bits (1944), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 457/982 (46%), Positives = 620/982 (63%), Gaps = 73/982 (7%)

Query: 40   AQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRD 99
             Q+LTT+DALAYLKAVK+ F+D + KYD+FLEVMKDFKAQR+DTAGVI RVK+LFKGHR 
Sbjct: 40   GQRLTTDDALAYLKAVKEKFKDDKGKYDEFLEVMKDFKAQRLDTAGVITRVKDLFKGHRQ 99

Query: 100  LILGFNTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDIL 159
            LILGFNTFLP+GYEITLPLE+++  P   VEF++AIN+VNKIK RFQ ++HVYK+FL+IL
Sbjct: 100  LILGFNTFLPRGYEITLPLEEDKKQP--AVEFDQAINYVNKIKARFQTNEHVYKAFLEIL 157

Query: 160  NMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDR-- 217
            NMYRK NKSI EVYQEV +LF++H DLLEEFT+FLP S+G+  +H V +    I R R  
Sbjct: 158  NMYRKGNKSINEVYQEVASLFENHGDLLEEFTYFLPGSTGS-PVHPVATPVQQIPRLRDE 216

Query: 218  ----SSAMPTARQVHVDKKERAMASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERE 273
                ++  P   ++ + KK ++     +R  S DR +P+      +++KD R+R +KE++
Sbjct: 217  KGFGANVKPLNERLVIPKKGKSSVMSGER--SRDR-EPER-----RTEKD-RKRSDKEKD 267

Query: 274  RRDDHRRERERDDRDFENDVNRDFSMQRFPHKRKSARKIEDSTAEPLHQGGEGDENFGMH 333
            R+D   R+      D   D  +DF+ Q+ P KR SAR   D+      Q GEG + F + 
Sbjct: 268  RKDMGDRKDRVGKEDGGRDKEKDFAEQK-PAKRASARNASDAIRRQC-QAGEGGDGFSVT 325

Query: 334  PVSSSYDDKNAMKSMFSQELSFCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLV 391
               +  DDK A+K     +  F +KVK +LR  D YQEFL+CL+++++EIITR+ELQSLV
Sbjct: 326  ASQALTDDKKAVKGEIGVQYPFFDKVKARLRSRDTYQEFLKCLNIFSQEIITRAELQSLV 385

Query: 392  GDLLGRYPDLMDGFNGFLARCEKSEELLADVMSKKSL--WNEGRIPKSVKVEDRDRDRDR 449
            GD+LG++ DLM+GF  FL  CE  E  LA V S + L  + E    K+VK E   R  +R
Sbjct: 386  GDILGQHADLMEGFTEFLTHCENVEGYLAGVFSGRKLGDFTEAAPLKAVKTE---RGGER 442

Query: 450  ERDDGVKDRDREAREKDRLDKSVAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCT 509
            ER    ++R+R+A+E++R D   +   ++ G K+   S+KDKY+ KPI ELDLSNC+RCT
Sbjct: 443  ERSREDRERERDAKERER-DVKPSQAAREGGHKV--VSNKDKYINKPISELDLSNCDRCT 499

Query: 510  PSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDD 569
            PSYRLLPK+Y  P +S RT LG  VLND WVS+TSGSEDYSFKHMRKNQYEESLFRCEDD
Sbjct: 500  PSYRLLPKHYPRPVSSHRTALGNSVLNDSWVSMTSGSEDYSFKHMRKNQYEESLFRCEDD 559

Query: 570  RFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFTALNLRCIERLYGDHGLD 629
            RFELDMLLE   VT K V E   K    + K +    +++  +A+NLRCIER+YGDHGLD
Sbjct: 560  RFELDMLLEGTAVTAKLVGEYTTKQEELSGKAEALPPMDEFLSAINLRCIERIYGDHGLD 619

Query: 630  VMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQ 689
            +++ +RKN S A+PVI +RL QK+EEW RCR + NKVW+E+Y+KN +K+LDHRSFYF+ Q
Sbjct: 620  MLEAVRKNMSRAMPVIHSRLVQKEEEWTRCREEMNKVWSEVYAKNCYKALDHRSFYFRSQ 679

Query: 690  DSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLI 749
            D K+L  K L AEIKE++EK+R+EDD +LAIAAG+RR + P L++E+SD  IH+D+YQ+I
Sbjct: 680  DKKALSTKGLLAEIKEVNEKRRREDDTMLAIAAGDRRPLQPDLQYEFSDLAIHDDMYQII 739

Query: 750  KYSCGEMCTT-EQLDKVMKIWTTFLEPMLGVPSRPQGAEDTEDVVKAKSHTVK------- 801
            KYS  E+ ++ +  +K M +W  F+EP+L + SR +G ED E+ VKAKS   K       
Sbjct: 740  KYSSEEISSSSDHTEKTMHMWRMFVEPVLDLSSRSKGVEDMEERVKAKSSEGKVWDGNGG 799

Query: 802  -SRAASVGDSDGSPDGDAAAMTSKHSNPSRNGDESIPPEQSSSSRAWLPNGDHGIKEDVS 860
             +  +   +   SP+G  AA+    S      +     E  +   A   NG+      V 
Sbjct: 800  ENGGSEGDEMTSSPEGGTAAVEGGDSVSGGV-EVVGVEECGARVTAGTTNGE------VR 852

Query: 861  VEADHNARKSDNFCDSSEQDKVQNNAAMADETSGISKQASTNERLIGTNAAIAAAADQSN 920
              AD   R S +     E D+   + A  D   G ++         GT A    +     
Sbjct: 853  RAADCGERNSADIA-GGEADERGGDGAREDVVRGGAEDGGE-----GTAARTEGSGWLHA 906

Query: 921  GRSNIENTSGLSVAHSRPGNHIVEGGLELRSSNEILPSSEGGECSRQNISTNGVMTEGAK 980
            G S  + +SG   A  R       G +E R++                   +G + +G  
Sbjct: 907  GISGTKQSSG---AAKR-------GDVERRAN-----------AGHGENRGSGSVADGGS 945

Query: 981  ILRYNAESVKQFKIEREEGELS 1002
            ++  +  S  +   +REEGELS
Sbjct: 946  LVADDNGSGSRAAADREEGELS 967


>gi|168062873|ref|XP_001783401.1| putative histone deacetylase complex, SIN3 component
           [Physcomitrella patens subsp. patens]
 gi|162665099|gb|EDQ51795.1| putative histone deacetylase complex, SIN3 component
           [Physcomitrella patens subsp. patens]
          Length = 1346

 Score =  747 bits (1928), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 419/828 (50%), Positives = 558/828 (67%), Gaps = 63/828 (7%)

Query: 17  PMISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDF 76
           P I    E +G   +    G     +LTT+DALAYLKAVK+ FQ+ + KYD+FLEVMKDF
Sbjct: 22  PRIGEDSEVAGNKTISVANG----HRLTTDDALAYLKAVKEKFQEDKPKYDEFLEVMKDF 77

Query: 77  KAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLEDEQPPPKKPVEFEEAIN 136
           KAQ++DTAGVI+RVK+LFKGH  LI+GFN FLP+GYEIT P E+E+P     VEF++AIN
Sbjct: 78  KAQKVDTAGVISRVKQLFKGHPQLIMGFNAFLPRGYEITQP-EEEKPA----VEFDQAIN 132

Query: 137 FVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLPD 196
           +V+KIK+RF   + VYK FL+ILN YRK NK+I EVYQEV  LF DHPDLLEEFT+FLP 
Sbjct: 133 YVSKIKSRFATKESVYKQFLEILNFYRKGNKTINEVYQEVAKLFADHPDLLEEFTYFLPG 192

Query: 197 SSGAA----SIHYVPSGRNSILRD----RSSAMPTARQVHVDKKERAMASHADRDLSVDR 248
           ++ AA      + +P   N+  RD    ++S  P+  ++ + KKE+++A   +R  S DR
Sbjct: 193 TNSAAMGTGQPNAIPMQHNAHQRDEAGFKASGKPSNDRLIIPKKEKSLAMPGER--SRDR 250

Query: 249 PDPDHDRVLLKSDKDQRRRGEKERERRDDHRRE---RERDDRDFENDVNRDFSMQRFPHK 305
              + +R++   DKD           RD HR++   +E   RD +ND    F+ Q+ P K
Sbjct: 251 ---EPERLV---DKD-----------RDRHRKDTVVKEEGGRDTQND----FAKQK-PAK 288

Query: 306 RKSARKIEDSTAEPLHQGGEGDENFGMHPVSSSYDDKNAMKSMFSQELSFCEKVKDKLR- 364
           R SAR   D+       G  G+   G  P +S+ DDK A+K+    +  F +KVK +LR 
Sbjct: 289 RTSARNASDAIRRQSQAGEGGEGFSGSVPQAST-DDKKAVKAAIGVQYPFFDKVKARLRS 347

Query: 365 -DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLARCEKSEELLADVM 423
            D YQEFL+CL+++++EIITR+ELQ+LVGD+LG++ DLM+GF  FL  CE  E  LA V 
Sbjct: 348 RDTYQEFLKCLNIFSQEIITRAELQTLVGDILGKHADLMEGFTEFLTHCENVEGYLAGVF 407

Query: 424 SKKSL--WNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRLDKSVAFVNKDVGP 481
           + + L  + +    K+VK E   RD +RER+          RE++R  K  +   K+ G 
Sbjct: 408 NGRKLQDFADAAPVKAVKTE---RDGERERNREKDKERERDRERERDVKP-SQAAKEGGH 463

Query: 482 KMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS 541
           K+S  S+KDKY+ KPI ELDLSNC+RCTPSYRLLPK Y  P +S RT LG  VLND WVS
Sbjct: 464 KVS--SNKDKYINKPISELDLSNCDRCTPSYRLLPKYYPRPVSSHRTALGNSVLNDSWVS 521

Query: 542 VTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKT 601
           VTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLE   VT K V E   K    + + 
Sbjct: 522 VTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLEGTAVTAKLVGEYTSKQEEQSGQA 581

Query: 602 DGPIRVEDHFTALNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRS 661
           +    V++  +A+NLRCIER+YGDHGLD+++ +RKN S A+PV+ +RL QK+EEW RCR 
Sbjct: 582 EALPPVDEFLSAINLRCIERIYGDHGLDMLEAVRKNTSRAMPVVHSRLVQKEEEWTRCRE 641

Query: 662 DFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIA 721
             NKVW+E+Y+KN +K+LDHRSFYF+ QD K+L  K L AEIKE++EK+R+EDD++LA+A
Sbjct: 642 VMNKVWSEVYAKNCYKALDHRSFYFRSQDKKALSTKGLLAEIKEMNEKRRREDDMMLAVA 701

Query: 722 AGNRRSIVPHLEFEYSDPDIHEDLYQLIKYSCGEMCTT-EQLDKVMKIWTTFLEPMLGVP 780
           AGNRR ++P L +E+SD  IH+D+YQ+IKYS  E+ ++ +  ++ M++W  F+EP+LG+ 
Sbjct: 702 AGNRRPLLPDLRYEFSDMSIHDDIYQIIKYSSEEISSSPDHAERTMQMWRMFVEPVLGLS 761

Query: 781 SRPQGAEDTEDVVKAKS-------HTVKSRAASVGDSDGSPDGDAAAM 821
           SR QG ED E+ VK KS        T +    S GD   SP+G  AA+
Sbjct: 762 SRSQGVEDMEEGVKGKSVEGKGEDGTGRKSGGSEGDETSSPEGGTAAL 809


>gi|168064883|ref|XP_001784387.1| putative histone deacetylase complex, SIN3 component
           [Physcomitrella patens subsp. patens]
 gi|162664058|gb|EDQ50792.1| putative histone deacetylase complex, SIN3 component
           [Physcomitrella patens subsp. patens]
          Length = 1319

 Score =  725 bits (1871), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 408/800 (51%), Positives = 536/800 (67%), Gaps = 38/800 (4%)

Query: 40  AQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRD 99
            Q+LTT+DALAYLKAVK+ F+D + KYD+FLEVMKDFKAQ++DTAGVI+RVK+LFKGH  
Sbjct: 2   GQRLTTDDALAYLKAVKEKFKDDKAKYDEFLEVMKDFKAQKVDTAGVISRVKQLFKGHPQ 61

Query: 100 LILGFNTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDIL 159
           LI GFN FLP+GYEIT P E+E+P     VEF++AIN+VNKIK RF  ++ VYK FL+IL
Sbjct: 62  LIFGFNAFLPRGYEITQP-EEEKPA----VEFDQAINYVNKIKARFATNESVYKQFLEIL 116

Query: 160 NMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGR----NSILR 215
           N YRK NK+I EVYQEV  LF DHPDLLEEFT+FLP ++GA+  +  PS +    N+  R
Sbjct: 117 NYYRKGNKTINEVYQEVAKLFADHPDLLEEFTYFLPGTNGASMGNSHPSAKHVPQNARQR 176

Query: 216 DRSSAMPTARQVHVDKKERAMASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERR 275
           D      + +  +    ER ++   D+ +++    P       + ++   +  +K  + +
Sbjct: 177 DEKGFGGSGKPPN----ERPISLKKDKFVAM----PGERSREREPERRVEKNRKKLDKDK 228

Query: 276 DDHRRERERDDRDFENDVNRDFSMQRFPHKRKSARKIEDSTAEPLHQGGEGDENFGMHPV 335
            D R  ++R DR+   D  +DF  Q+ P KR SAR   D+      Q  E  E +     
Sbjct: 229 KDDRDRKDRADREGGGDREKDFVEQK-PAKRASARNASDAIRRQ-SQAAERAEGYSEPAP 286

Query: 336 SSSYDDKNAMKSMFSQELSFCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGD 393
            +S +DK   K     +  F +KVK +LR  D YQEFL+CL+++++EII+R ELQSLVGD
Sbjct: 287 QASMEDKKMFKGAVGVQYPFFDKVKARLRSRDTYQEFLKCLNIFSQEIISREELQSLVGD 346

Query: 394 LLGRYPDLMDGFNGFLARCEKSEELLADVMSKKSL--WNEGRIPKSVKVE-DRDRDRDRE 450
           +LG + DLM+GF  FL  CE  E  LA V S + L  + EG   K+VK E D +R+R+RE
Sbjct: 347 ILGNHADLMEGFTEFLTHCENVEGYLAGVFSGRKLGDFAEGVPLKAVKTERDGERERNRE 406

Query: 451 RD-------DGVKDRDRE--AREKDRLDKSVAFVNKDVGPKMSMYSSKDKYLAKPIQELD 501
           +D       D  KDRDRE  A+E++R  K  +   K+   K++  S+ DKYL KPI ELD
Sbjct: 407 KDKEREREKDNEKDRDREQDAKERERHVKP-SQAAKEGSHKVA--SNSDKYLNKPISELD 463

Query: 502 LSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEE 561
           LS+C+RCTPSYRLLPK +L P +S RT LG  VLND WVSVTSGSEDYSFKHMRKNQYEE
Sbjct: 464 LSSCDRCTPSYRLLPKQHLRPVSSHRTALGNSVLNDSWVSVTSGSEDYSFKHMRKNQYEE 523

Query: 562 SLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFTALNLRCIER 621
           SLFRCEDDR+ELDMLLE   VT K V E   K      K +    V++  +A+NLRCIER
Sbjct: 524 SLFRCEDDRYELDMLLEGTAVTAKVVGEFTAKQEEQNGKMEPLPPVDEFLSAINLRCIER 583

Query: 622 LYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDH 681
           +YGDHGLD+++ LRKN S A+PVI +RL QK+EEW RCR + NKVW+E+Y+KN +K+LDH
Sbjct: 584 IYGDHGLDMLEALRKNTSRAMPVIHSRLVQKEEEWTRCREEMNKVWSEVYAKNCYKALDH 643

Query: 682 RSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDI 741
           RSFYF+ QD K+L  K L AEIKE+SEK+R EDD +LAIA  NR   +P + +E+SD  I
Sbjct: 644 RSFYFRSQDKKALSTKGLLAEIKEVSEKRRNEDDTVLAIAGINRGPSLPDMRYEFSDLSI 703

Query: 742 HEDLYQLIKYSCGEMCTT-EQLDKVMKIWTTFLEPMLGVPSRPQGAEDTEDVVKAKSHTV 800
           H+D+YQ IKYS  E+ ++ +  +K ++ W  F+EP+LG+ SR QG ED E+ V  K    
Sbjct: 704 HDDIYQTIKYSSEEISSSLDYTEKTLRTWRMFVEPVLGISSRSQGVEDVEEGVMVKPLEG 763

Query: 801 KSRAASVGDSDGSPDGDAAA 820
           K    + G+S GS  GD A+
Sbjct: 764 KGVDGNGGESGGS-QGDEAS 782


>gi|168031507|ref|XP_001768262.1| putative histone deacetylase complex, SIN3 component [Physcomitrella
            patens subsp. patens]
 gi|162680440|gb|EDQ66876.1| putative histone deacetylase complex, SIN3 component [Physcomitrella
            patens subsp. patens]
          Length = 1299

 Score =  718 bits (1854), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 437/960 (45%), Positives = 577/960 (60%), Gaps = 104/960 (10%)

Query: 73   MKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLEDEQPPPKKPVEFE 132
            MKDFK Q++DTAGVI+RVK+LFKGH  LILGFNTFLPKGYEITLP E+E+P     VEF+
Sbjct: 1    MKDFKVQKVDTAGVISRVKQLFKGHPQLILGFNTFLPKGYEITLP-EEEKPA----VEFD 55

Query: 133  EAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTH 192
            +AIN+VNKIK RF  ++ VYK FL+ILN YRK NKSI EVYQEV  LF +HPDLLEEFT+
Sbjct: 56   QAINYVNKIKARFAANESVYKQFLEILNYYRKGNKSINEVYQEVARLFANHPDLLEEFTY 115

Query: 193  FLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQVHVDKKERAMASHADRDLSVDRPDPD 252
            FLP +SG AS                SA P+  ++ + KKE++ +   +R    +     
Sbjct: 116  FLPGTSGFAS----------------SAKPSNDRLVILKKEKSSSVPGERSREREPERRP 159

Query: 253  HDRVLLKSDKDQRRRGEKERERRDDHRRERERDDRDFENDVNRDFSMQRFPHKRKSARKI 312
                 +  DK +R+  E   +R    R +RE   RD E    ++F  Q+ P KR SAR  
Sbjct: 160  ERPRKV-GDKAERK--ETWYDRDRKDRVDREEGSRDKE----KEFVEQK-PAKRASARTA 211

Query: 313  EDSTAEPLHQGGEGDENFGMHPVSSSYDDKNAMKSMFSQELSFCEKVKDKLR--DDYQEF 370
             D+      Q GE  E F      +S DDK ++K +   +  F +KVK +LR  D YQEF
Sbjct: 212  SDAIRRQ-SQAGEVGEGFSGPVPQASTDDKKSVKGVIGVQYPFFDKVKARLRSRDTYQEF 270

Query: 371  LRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLARCEKSEELLADVMSKKSLWN 430
            L+CL+++++EII+R ELQSLVGD+LG++ DLM+GF  FL  CE  E  LA V S + L  
Sbjct: 271  LKCLNIFSQEIISRDELQSLVGDILGKHADLMEGFTEFLTHCENVEGYLAGVFSGRKLGE 330

Query: 431  --EGRIPKSVKVE-DRDRDRDRERDDGVKDRDREAREKDRLDKSVAFVNKDVGPKMSMYS 487
              EG   K VK E D DR+R+RE++   ++R R+ +E+DR D   +   K+ G K+   S
Sbjct: 331  IAEGAPVKDVKTERDGDRERNREKEK-ERERQRDTKERDR-DVKPSQAAKEGGHKV--VS 386

Query: 488  SKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSE 547
            +KDKY+ KPI ELDLSNC+RCTPSYRLLPK+Y  P ++ RT LG  VLND WVSVTSGSE
Sbjct: 387  NKDKYINKPISELDLSNCDRCTPSYRLLPKHYPRPVSNHRTALGNSVLNDSWVSVTSGSE 446

Query: 548  DYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRV 607
            DYSFKHMRKNQYEESLFRCEDDRFELDMLLE   VT K V + + K      K +    V
Sbjct: 447  DYSFKHMRKNQYEESLFRCEDDRFELDMLLEGTAVTAKLVGDYITKQEEQNGKAEALPPV 506

Query: 608  EDHFTALNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVW 667
            ++  +A+NLRCIER+YGDHGLD+++ +RKN S A+PVI +RL QK+EEW RCR + NKVW
Sbjct: 507  DEFLSAINLRCIERIYGDHGLDMLEAVRKNTSRAMPVIHSRLVQKEEEWTRCREEMNKVW 566

Query: 668  AEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRS 727
            +E+Y+KN +K+LDHRSFYF+ QD K+L  K L AEIKE+SEK+R+EDD +LA+ AGNR+ 
Sbjct: 567  SEVYAKNCYKALDHRSFYFRSQDKKALSTKGLLAEIKEVSEKRRREDDTMLAMIAGNRKP 626

Query: 728  IVPHLEFEYSDPDIHEDLYQLIKYSCGEMCTT-EQLDKVMKIWTTFLEPMLGVPSRPQGA 786
            ++P L +E+SDP IH+D+YQ+IKYS  E+ +  +  +K M++W  F+EP+LGV SR Q  
Sbjct: 627  LLPDLRYEFSDPSIHDDMYQIIKYSSEEISSLPDHTEKTMRMWKMFVEPVLGVSSRSQRV 686

Query: 787  EDTEDVVKAKSHTVKSRAASVGDSDGSPDGDA------AAMTSKHSNPSRNGDESIPPEQ 840
            ED E+ VK K+   +      G+S GS +G+         M+S+    +  G E +  E 
Sbjct: 687  EDVEEGVKEKALESEGGDGIGGESAGS-EGNGRSSPEDGGMSSEREGTTSRGAEVVGVEG 745

Query: 841  S-----------SSSRAWLPNGDHGIKEDVSVEADHNARKSDNFCDSSEQDKVQNNAAMA 889
            S           ++S      G + + E+  VEAD   R SD    + E   V+     A
Sbjct: 746  SEGRVMAGTTNGAASGGERNVGGNSVVENARVEADD--RGSDG---AREGVAVEGGEGTA 800

Query: 890  DETSGISKQASTNERLIGTNAAIAAAADQSNGRSNIENTSGLSVAHSRPGNHIVEGGLEL 949
              T G            G N A  +      G   +   +GL    +R    + +GG  L
Sbjct: 801  ARTEGSGWLHG------GGNGAKQSGGAAGRGEVGVRANAGL--GENRGSRSVADGGGLL 852

Query: 950  RSSNEILPSSEGGECSRQNISTNGVMTEGAKILRYNAESVKQFKIEREEGELSPNGDFEE 1009
              SN     S GGE                              ++REEGELSP  + EE
Sbjct: 853  MDSN----GSGGGEA-----------------------------VDREEGELSPCSEQEE 879


>gi|413947140|gb|AFW79789.1| hypothetical protein ZEAMMB73_868863 [Zea mays]
          Length = 1091

 Score =  703 bits (1815), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 391/676 (57%), Positives = 481/676 (71%), Gaps = 31/676 (4%)

Query: 345  MKSMFSQELSFCEKVKDKLRDD-YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMD 403
            +  +++ E  FCEKVK+KL  + YQEFL+CLH+Y++EIITRSEL++LV D+L  YPDLM+
Sbjct: 9    LSGVYTHEFHFCEKVKEKLEHEAYQEFLKCLHIYSQEIITRSELKNLVNDILQHYPDLME 68

Query: 404  GFNGFLARCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAR 463
            GFN FL  CE  +  LA V +K+      RI K+   E        +RD          +
Sbjct: 69   GFNEFLEHCENIDGFLAGVFNKRPTT---RIVKTEDKEKDRDRDREDRDR--DREKEREK 123

Query: 464  EKDRLDKSVAFVNKDVGP-KMSMYSSKDKY-LAKPIQELDLSNCERCTPSYRLLPKNYLI 521
            E++RLDK   F +KD    K  M+S K+KY L+KPI ELDLSNC+RCTPSYRLLPKNY +
Sbjct: 124  ERERLDKGSTFNSKDGSCHKPPMFSGKEKYNLSKPISELDLSNCQRCTPSYRLLPKNYPM 183

Query: 522  PSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVN 581
            P AS RT+LGA VLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVN
Sbjct: 184  PPASNRTDLGASVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVN 243

Query: 582  VTTKRVEELLEKINNNTIKTDGPIRVEDHFTALNLRCIERLYGDHGLDVMDVLRKNASLA 641
              TKRVEEL+EK+ +N++K + PIR+++H T LNLRCIERLYGDHGLDVMDVLRKNAS+A
Sbjct: 244  AATKRVEELIEKMQDNSVKPESPIRMDEHLTPLNLRCIERLYGDHGLDVMDVLRKNASVA 303

Query: 642  LPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSA 701
            LPVILTRLKQKQEEW+RCRSDFNKVWAEIY+KNYHKSLDHRSFYFKQQD+K+L  K+L  
Sbjct: 304  LPVILTRLKQKQEEWSRCRSDFNKVWAEIYAKNYHKSLDHRSFYFKQQDTKNLSTKSLLT 363

Query: 702  EIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLIKYSCGEMC-TTE 760
            EIKEI+EKKRKEDDVLLAIAAGNRR IVP++ FEY D +IHEDL+++IKYSCGE+C +++
Sbjct: 364  EIKEINEKKRKEDDVLLAIAAGNRRPIVPNMSFEYVDSEIHEDLHKIIKYSCGEICNSSD 423

Query: 761  QLDKVMKIWTTFLEPMLGVPSRPQGAEDTEDVVKAKSHTVKSRAASVGDSDGSPDGDAAA 820
            QLDKVM+IWTTF+EP+LGV  R  G+ED  D+VK KS T KS  A+VG+S+       A 
Sbjct: 424  QLDKVMRIWTTFVEPILGV-QRKHGSEDP-DLVKPKSRTTKSGIANVGESN-----TGAG 476

Query: 821  MTSKHSNPSRNGDESIPPEQSSSSRAWLPNGDHGIKEDVSVEADHNARKSDNFCDSSEQD 880
            + SKH+    N DES   EQ   SRA + NG     ++   +AD  AR+ +   + +   
Sbjct: 477  IVSKHN----NDDES---EQGLPSRARIANGVAANAQNGFHDADRIARRGEESLNVTLNG 529

Query: 881  KVQNNAAMADETSGISKQASTNERLIGTNAAIAAAADQSNGRSNIENTSGLSVAHSRPGN 940
            +V   AA ADET  +S Q   +      NAA+         ++N+E T G  V  SR  +
Sbjct: 530  RVH-GAASADETPSLSTQNIASTERSAENAAVVRTEQH---KANLELTPG--VNGSRSSH 583

Query: 941  HIVEGGLELRSSNEILPSSEGGECSRQNISTNGVMTEGAKILRYNAESVKQF-KIEREEG 999
              VE   E ++ NE LPS+ GGE  R   S NG+ +EG K    N  S     K+EREEG
Sbjct: 584  GAVEVAGEGKAVNETLPSAVGGETGRLGPSFNGI-SEGIKGRLNNDGSAPHISKVEREEG 642

Query: 1000 ELSPNGDFEEDNFAVY 1015
            ELSPNGDF+ED+F  +
Sbjct: 643  ELSPNGDFDEDHFVPF 658


>gi|413947139|gb|AFW79788.1| hypothetical protein ZEAMMB73_868863 [Zea mays]
          Length = 1027

 Score =  702 bits (1812), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 391/676 (57%), Positives = 481/676 (71%), Gaps = 31/676 (4%)

Query: 345  MKSMFSQELSFCEKVKDKLRDD-YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMD 403
            +  +++ E  FCEKVK+KL  + YQEFL+CLH+Y++EIITRSEL++LV D+L  YPDLM+
Sbjct: 9    LSGVYTHEFHFCEKVKEKLEHEAYQEFLKCLHIYSQEIITRSELKNLVNDILQHYPDLME 68

Query: 404  GFNGFLARCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAR 463
            GFN FL  CE  +  LA V +K+      RI K+   E        +RD          +
Sbjct: 69   GFNEFLEHCENIDGFLAGVFNKRPT---TRIVKTEDKEKDRDRDREDRD--RDREKEREK 123

Query: 464  EKDRLDKSVAFVNKDVGP-KMSMYSSKDKY-LAKPIQELDLSNCERCTPSYRLLPKNYLI 521
            E++RLDK   F +KD    K  M+S K+KY L+KPI ELDLSNC+RCTPSYRLLPKNY +
Sbjct: 124  ERERLDKGSTFNSKDGSCHKPPMFSGKEKYNLSKPISELDLSNCQRCTPSYRLLPKNYPM 183

Query: 522  PSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVN 581
            P AS RT+LGA VLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVN
Sbjct: 184  PPASNRTDLGASVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVN 243

Query: 582  VTTKRVEELLEKINNNTIKTDGPIRVEDHFTALNLRCIERLYGDHGLDVMDVLRKNASLA 641
              TKRVEEL+EK+ +N++K + PIR+++H T LNLRCIERLYGDHGLDVMDVLRKNAS+A
Sbjct: 244  AATKRVEELIEKMQDNSVKPESPIRMDEHLTPLNLRCIERLYGDHGLDVMDVLRKNASVA 303

Query: 642  LPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSA 701
            LPVILTRLKQKQEEW+RCRSDFNKVWAEIY+KNYHKSLDHRSFYFKQQD+K+L  K+L  
Sbjct: 304  LPVILTRLKQKQEEWSRCRSDFNKVWAEIYAKNYHKSLDHRSFYFKQQDTKNLSTKSLLT 363

Query: 702  EIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLIKYSCGEMC-TTE 760
            EIKEI+EKKRKEDDVLLAIAAGNRR IVP++ FEY D +IHEDL+++IKYSCGE+C +++
Sbjct: 364  EIKEINEKKRKEDDVLLAIAAGNRRPIVPNMSFEYVDSEIHEDLHKIIKYSCGEICNSSD 423

Query: 761  QLDKVMKIWTTFLEPMLGVPSRPQGAEDTEDVVKAKSHTVKSRAASVGDSDGSPDGDAAA 820
            QLDKVM+IWTTF+EP+LGV  R  G+ED  D+VK KS T KS  A+VG+S+       A 
Sbjct: 424  QLDKVMRIWTTFVEPILGV-QRKHGSEDP-DLVKPKSRTTKSGIANVGESN-----TGAG 476

Query: 821  MTSKHSNPSRNGDESIPPEQSSSSRAWLPNGDHGIKEDVSVEADHNARKSDNFCDSSEQD 880
            + SKH+    N DES   EQ   SRA + NG     ++   +AD  AR+ +   + +   
Sbjct: 477  IVSKHN----NDDES---EQGLPSRARIANGVAANAQNGFHDADRIARRGEESLNVTLNG 529

Query: 881  KVQNNAAMADETSGISKQASTNERLIGTNAAIAAAADQSNGRSNIENTSGLSVAHSRPGN 940
            +V   AA ADET  +S Q   +      NAA+         ++N+E T G  V  SR  +
Sbjct: 530  RVH-GAASADETPSLSTQNIASTERSAENAAVVRTEQH---KANLELTPG--VNGSRSSH 583

Query: 941  HIVEGGLELRSSNEILPSSEGGECSRQNISTNGVMTEGAKILRYNAESVKQF-KIEREEG 999
              VE   E ++ NE LPS+ GGE  R   S NG+ +EG K    N  S     K+EREEG
Sbjct: 584  GAVEVAGEGKAVNETLPSAVGGETGRLGPSFNGI-SEGIKGRLNNDGSAPHISKVEREEG 642

Query: 1000 ELSPNGDFEEDNFAVY 1015
            ELSPNGDF+ED+F  +
Sbjct: 643  ELSPNGDFDEDHFVPF 658


>gi|449533078|ref|XP_004173504.1| PREDICTED: paired amphipathic helix protein Sin3-like 4-like,
           partial [Cucumis sativus]
          Length = 563

 Score =  690 bits (1780), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 347/556 (62%), Positives = 416/556 (74%), Gaps = 28/556 (5%)

Query: 375 HLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLARCEKSEELLADVMSKKSLWNEGRI 434
           +L T + I+R+     V DLLGRYPDLMD F  F+  C++++ LLAD+MSKKSLWNEG +
Sbjct: 35  NLITTDFISRA-----VRDLLGRYPDLMDAFGEFMILCDRTDGLLADIMSKKSLWNEGSL 89

Query: 435 PKSVKVEDRDRDRDRERDDGVKDRDREAREKDRLDKSVAFVNKDVGP-KMSMYSSKDKYL 493
           P+  KVE++DR+RD ER+DG KDRD   RE+DRL+KSVAF + DVG  KMS++SSKDKY 
Sbjct: 90  PRLAKVEEKDRNRDHEREDGFKDRDHGNRERDRLEKSVAFGHNDVGSHKMSLFSSKDKYF 149

Query: 494 AKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKH 553
            KPI ELDLSNCERCTPSYRLLPKNY IP ASQRTE+G +VLNDHWVSVTSGSEDYSFKH
Sbjct: 150 GKPINELDLSNCERCTPSYRLLPKNYPIPFASQRTEIGDQVLNDHWVSVTSGSEDYSFKH 209

Query: 554 MRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFTA 613
           MRKNQYEESLFRCEDDRFELDMLLESVNVT+KRVE+LLEKIN     +D P+ +EDH TA
Sbjct: 210 MRKNQYEESLFRCEDDRFELDMLLESVNVTSKRVEDLLEKIN----LSDSPVHIEDHLTA 265

Query: 614 LNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSK 673
           LNLRCIERLYGDHGLDVMDVLRKNA L+LPVILTRLKQKQEEWARCRSDFNKVWAEIY K
Sbjct: 266 LNLRCIERLYGDHGLDVMDVLRKNAPLSLPVILTRLKQKQEEWARCRSDFNKVWAEIYFK 325

Query: 674 NYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLE 733
           NY KSLDHRSFYFKQQD+KSL  KAL +EIKEI+EKK KE+DVLL I A N+R I+P+LE
Sbjct: 326 NYQKSLDHRSFYFKQQDTKSLSTKALLSEIKEINEKKHKEEDVLLTITAENKRPIIPNLE 385

Query: 734 FEYSDPDIHEDLYQLIKYSCGEMCTTEQLDKVMKIWTTFLEPMLGVPSRPQGAEDTEDVV 793
           F+Y D DIHEDLY LIKYSC E+C+T+Q DK MKIWTTFLEPMLG+ SRP  +E +++++
Sbjct: 386 FDYPDQDIHEDLYHLIKYSCRELCSTDQSDKAMKIWTTFLEPMLGIASRPLSSEVSKEII 445

Query: 794 KAKSHTVKSRAASVGDSDGSPDGDAAAMTSKHSNPSRNGDESIPPEQSSSSRAWLPNGDH 853
           +  +  V  R  ++G    S         SK  +P R     + P+QSS  R W  NGD 
Sbjct: 446 RENNFAV--RGTAIGMVGVSSSHTVGGDESKLRDPPRIEVGGVQPKQSSPCRVWPMNGDS 503

Query: 854 GIKEDVSVEADHNARKSDNFCDSSEQDKVQNNAAMADETSGISKQASTNERLIGTNAAIA 913
            I+E+    + H A + D+  DS  + +   N            Q  +NERL+ +N  ++
Sbjct: 504 CIEEN----SFHKANRVDSKVDSLRKLQFNEN------------QDDSNERLVKSNVLVS 547

Query: 914 AAADQSNGRSNIENTS 929
           +  +Q  G+  IE  S
Sbjct: 548 SVLEQGKGKVTIETAS 563


>gi|357486301|ref|XP_003613438.1| Paired amphipathic helix protein Sin3 [Medicago truncatula]
 gi|355514773|gb|AES96396.1| Paired amphipathic helix protein Sin3 [Medicago truncatula]
          Length = 1513

 Score =  671 bits (1731), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 389/600 (64%), Positives = 458/600 (76%), Gaps = 53/600 (8%)

Query: 1   MKRSRDEVYMNS-QIKRPMI-SSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDI 58
           MKR RD+V+M+S Q+KRPM+ +SRGE SGQ          G+QKLTTNDALAYLKAVKDI
Sbjct: 1   MKRQRDDVFMSSSQLKRPMLNTSRGEASGQPP------NRGSQKLTTNDALAYLKAVKDI 54

Query: 59  FQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPL 118
           FQDK+EKY+DFLEVMKDFKAQR+DT GVI RVKELF+GHRDLILGFNTFLPKG+EITL  
Sbjct: 55  FQDKKEKYEDFLEVMKDFKAQRVDTDGVIERVKELFRGHRDLILGFNTFLPKGHEITLSS 114

Query: 119 EDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQE--- 175
           EDEQP PKK VEF+EA+++VN IKTRFQGD HVYKSFLDILN YRKE+K IT VY+E   
Sbjct: 115 EDEQPQPKKKVEFDEAMSYVNTIKTRFQGDVHVYKSFLDILNTYRKESKPITLVYKEVCA 174

Query: 176 --VEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQVHVDKKE 233
             V ALFQ+HPDLLE F HFLP+++ AAS H     RNS+  DRSSAMPT R+VHV+K+E
Sbjct: 175 VIVAALFQNHPDLLEGFIHFLPEATTAASTHAF--ARNSMFGDRSSAMPTLRRVHVEKRE 232

Query: 234 RAMASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERE-RRDDHRRERERDDRDFEND 292
           R + SH DRD SVDRPD DHD   L+++K+++RR EKE++ + D  RRERERD RD+E+D
Sbjct: 233 RTIVSHGDRDPSVDRPDQDHDGGSLRAEKERKRRMEKEKDRKEDRGRRERERDYRDYEHD 292

Query: 293 VNRDFSMQRFPHKRKSARKIEDSTAEPLHQGGEGDENFGMHPVSSSYDDKNAMKSMFSQE 352
             RD   +R  HKRKS  K EDS AEPL    + D+NFG                  +QE
Sbjct: 293 RGRD--RERLSHKRKSDHKAEDSGAEPLL---DADQNFGTQ----------------NQE 331

Query: 353 LSFCEKVKDKLRD--DYQEFLRCLHLYTKEIITRSELQSLVG--DLLGRYPDLMDGFNGF 408
           L+FC+KVK++L++  DYQEFL+C+H+Y KEIITR ELQSLVG   LLG YPDLM+ FN F
Sbjct: 332 LAFCDKVKERLQNPGDYQEFLKCVHIYNKEIITRQELQSLVGGCGLLGDYPDLMESFNEF 391

Query: 409 LARCEKS-EELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDG----VKDRDREAR 463
           L + EK+    LA VM++KSLW EGR  K +  E RDRDRD +RD      +K+RDRE R
Sbjct: 392 LLQAEKNGGGFLAGVMNRKSLWIEGRGLKPMNAEQRDRDRDDDRDRYRDDEMKERDREFR 451

Query: 464 EKDRLDKSVAFVNKDV-GPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIP 522
           E+D+       +NKDV G KMS+Y SKDKYL+KPI ELDLSNCERCTPSYRLLPKNY IP
Sbjct: 452 ERDK----SPVINKDVSGSKMSLYPSKDKYLSKPINELDLSNCERCTPSYRLLPKNYPIP 507

Query: 523 SASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFEL--DMLLESV 580
            ASQ+T+LGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDR E   ++LL S 
Sbjct: 508 IASQKTDLGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRLEFANNVLLPST 567



 Score =  580 bits (1496), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 292/458 (63%), Positives = 347/458 (75%), Gaps = 12/458 (2%)

Query: 571  FELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFTALNLRCIERLYGDHGLDV 630
            FELDML+ESV+VTT RVEELLE I+ N IK D PI +E+H TALN RCIER+YGDHGLDV
Sbjct: 655  FELDMLVESVSVTTTRVEELLEVISKNPIKGDSPICIEEHLTALNFRCIERIYGDHGLDV 714

Query: 631  MDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQD 690
            ++VLRK  SLALPVILTRLKQKQEEWARCR+DF KVWAEIY+KNYHKSLDHRSFYFKQQD
Sbjct: 715  LEVLRKKPSLALPVILTRLKQKQEEWARCRADFGKVWAEIYAKNYHKSLDHRSFYFKQQD 774

Query: 691  SKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLIK 750
            ++SL  KAL  EIKEISEKK KEDDVLLAIAAGNRR I+P+LEFEY DPDIHEDLY+LIK
Sbjct: 775  TRSLSTKALLTEIKEISEKKHKEDDVLLAIAAGNRRPILPNLEFEYIDPDIHEDLYRLIK 834

Query: 751  YSCGEMCTTEQLDKVMKIWTTFLEPMLGVPSRPQGAEDTEDVVKAKSHTVKSRAASVGDS 810
            YSC E+CTTEQLDKVMKIWTTFLEPM  VP R QGAEDTE+VV AK+++V+    +V ++
Sbjct: 835  YSCAEVCTTEQLDKVMKIWTTFLEPMFCVPCRSQGAEDTEEVV-AKNNSVR----NVAET 889

Query: 811  DGSPDGDAAAMTSKHSNPSRNGDESIPPEQSSSSRAWLPNGDHGIKEDVSVEADHNARKS 870
            DG+P   A  M  KH + SRNGDE +P +QS+SS+AW  NGD G++ED  ++      KS
Sbjct: 890  DGNPGVGATIMNPKHVSTSRNGDECVPIDQSTSSKAWKSNGDTGVREDKCLDPGRTMHKS 949

Query: 871  DNFCDSSEQDKVQNNAAMADETSGISKQASTNERLIGTNAAIAAAADQSNGRSNIENTSG 930
            + F  + +       A M ++ SG++KQ  + ERL   N + A+  + SNGR+ I+NTSG
Sbjct: 950  ETFGSNPQLGNPDIIAFMPNKLSGVNKQDLSGERLENANVSPASGMELSNGRTEIDNTSG 1009

Query: 931  LSVAHSRPGNHIVEGGLELRSSNEILPSSEGGECSRQNISTNGVMTEGAKILRYNAESVK 990
             +   SR GN  V  GLE       LPSSEGG+ +R   STNG +  G ++ RY  ES  
Sbjct: 1010 FAATPSRNGNASVTRGLE-------LPSSEGGDSARLYASTNGAVAGGTEVCRYQEESNP 1062

Query: 991  QFKIEREEGELSPNGDFEEDNFAVYGESGLEAVHKAKD 1028
            QFK EREEGELSPNGDFEEDNFAVYG++G EAVHK  D
Sbjct: 1063 QFKSEREEGELSPNGDFEEDNFAVYGDAGSEAVHKGND 1100


>gi|26452910|dbj|BAC43533.1| putative transcriptional regulatory protein [Arabidopsis thaliana]
          Length = 543

 Score =  555 bits (1431), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 312/583 (53%), Positives = 393/583 (67%), Gaps = 66/583 (11%)

Query: 1   MKRSRDEVYMN-SQIKRPMISSRGEPSGQT----QVVGGGGGGGAQKLTTNDALAYLKAV 55
           MKR RD++Y   SQ KRP+ SSRGE   Q+        G GG   QKLTT+DAL YLK V
Sbjct: 1   MKRIRDDIYATGSQFKRPLGSSRGESYEQSPITGGGSIGEGGINTQKLTTDDALTYLKEV 60

Query: 56  KDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEIT 115
           K++FQD+R+KYD FLEVMKDFKAQ+ DT+GVI+RVKELFKGH +LI GFNTFLPKG+EIT
Sbjct: 61  KEMFQDQRDKYDMFLEVMKDFKAQKTDTSGVISRVKELFKGHNNLIFGFNTFLPKGFEIT 120

Query: 116 LPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQE 175
           L  +D + P KK VEFEEAI+FVNKIKTRFQ ++ VYKSFL+ILNMYRK+NK ITEVY E
Sbjct: 121 L--DDVEAPSKKTVEFEEAISFVNKIKTRFQHNELVYKSFLEILNMYRKDNKDITEVYNE 178

Query: 176 VEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQVHVDK---K 232
           V  LF+DH DLLEEFT FLPDS    +   +   +     DR S  P  R++ ++K   +
Sbjct: 179 VSTLFEDHSDLLEEFTRFLPDSLAPHTEAQLLRSQAQRYDDRGSGPPLVRRMFMEKDRRR 238

Query: 233 ERAMASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERRDDHRRERERDDRDFEND 292
           ER +AS  DRD SVDR D + D+ ++K  +DQR+R +K+          RER  RD E+ 
Sbjct: 239 ERTVASRGDRDHSVDRSDLNDDKSMVKMHRDQRKRVDKD---------NRERRSRDLEDG 289

Query: 293 VNRDFSMQRFPHKRKSARKIEDSTAEPLHQGGEGDENFGMHPVSSSYDDKNAMKSMFSQE 352
                ++Q F  KRKS+R++E                F  +   +S+ +KN +KSM++Q 
Sbjct: 290 EAEQDNLQHFSEKRKSSRRME---------------GFEAYSGPASHSEKNNLKSMYNQA 334

Query: 353 LSFCEKVKDKL--RDDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLA 410
             FCEKVK++L  +DDYQ FL+CL++++  II R +LQ+LV D+LG++PDLMD FN F  
Sbjct: 335 FLFCEKVKERLCSQDDYQAFLKCLNMFSNGIIQRKDLQNLVSDVLGKFPDLMDEFNQFFE 394

Query: 411 RCEKSEEL--LADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRL 468
           RCE  +    LA VMSKKSL +E  + +SVK E++DR+  R+ +         A+EK+R 
Sbjct: 395 RCESIDGFQHLAGVMSKKSLGSEENLSRSVKGEEKDREHKRDVE--------AAKEKER- 445

Query: 469 DKSVAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRT 528
                              SKDKY+ K IQELDLS+CERCTPSYRLLP +Y IPS   R 
Sbjct: 446 -------------------SKDKYMGKSIQELDLSDCERCTPSYRLLPPDYPIPSVRHRQ 486

Query: 529 ELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRF 571
           + GA VLNDHWVSVTSGSEDYSFKHMR+NQYEESLFRCEDDRF
Sbjct: 487 KSGAAVLNDHWVSVTSGSEDYSFKHMRRNQYEESLFRCEDDRF 529


>gi|168035354|ref|XP_001770175.1| histone deacetylase complex, SIN3 component [Physcomitrella patens
           subsp. patens]
 gi|162678552|gb|EDQ65009.1| histone deacetylase complex, SIN3 component [Physcomitrella patens
           subsp. patens]
          Length = 1168

 Score =  539 bits (1389), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 318/686 (46%), Positives = 421/686 (61%), Gaps = 75/686 (10%)

Query: 162 YRKENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAM 221
           YRK NK+I EVYQEV  LF DH DLLEEFT FLP +SG      + + R S  R    A 
Sbjct: 1   YRKGNKTINEVYQEVANLFADHSDLLEEFTCFLPGTSGTC----MGNDRRSFKR----AQ 52

Query: 222 PTARQVHVDKK---ERAMASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERRDDH 278
           P  RQ   D+K   E  M+S               DR+ ++ +     +GE  RER  +H
Sbjct: 53  PNVRQA--DEKGIGESGMSSI--------------DRLRIRDETSSYVQGELSRERPSEH 96

Query: 279 RRERERDDRDFENDVNRDFSMQRFPHKRKSARKIEDSTAEPLHQGGEGDENFGMHPVSSS 338
             +RE   RD +N+    F+ Q+ P KR SAR   D+      Q  EG E F      +S
Sbjct: 97  L-DREEGGRDKQNE----FAEQK-PAKRTSARNASDAIRRQ-SQAREGGEGFSGPVPQAS 149

Query: 339 YDDKNAMKSMFSQELSFCEKVKDKL--RDDYQEFLRCLHLYTKEIITRSELQSLVGDLLG 396
            DDK A+KS       F +KVK +L  RD YQEFL+CL+++++EII R ELQSLVGD+LG
Sbjct: 150 TDDKKAVKSAVGVHHPFFDKVKARLCSRDTYQEFLKCLNIFSQEIIGREELQSLVGDILG 209

Query: 397 RYPDLMDGFNGFLARCEKSEELLADVMSKKSL--WNEGRIPKSVKVEDRDRDRDRERDDG 454
           ++ DLM+GF  FL  CE  E  +A V +   L  + E    K VK+E             
Sbjct: 210 KHADLMEGFTEFLTHCENVEGCIAGVFTGLKLGDFAETAPLKVVKIERDGERERN----- 264

Query: 455 VKDRDREAREKDRLDKSVAFVNKDVGPKMS-------MYSSKDKYLAKPIQELDLSNCER 507
            ++R+R+A+EK+           DV P ++       +  +KDK++ KPI ELDLSNC+R
Sbjct: 265 -RERERDAKEKEH----------DVKPSLAAREGAHKVVPNKDKHINKPISELDLSNCDR 313

Query: 508 CTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCE 567
           CTPSYRLLPK+Y  P ++ RT L   VLND WVSVTSGSEDYSFKHMRKN YEESLFRCE
Sbjct: 314 CTPSYRLLPKHYTRPVSNHRTALENSVLNDSWVSVTSGSEDYSFKHMRKNPYEESLFRCE 373

Query: 568 DDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFTALNLRCIERLYGDHG 627
           DDRFELDMLLE   +T K V E   K    + + +    V + F+A++LRCIER+YGDHG
Sbjct: 374 DDRFELDMLLEGTAMTAKLVGEYTTKQEEQSGEANELPPVHEFFSAMSLRCIERIYGDHG 433

Query: 628 LDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFK 687
           LD+++ +RKN S A+P+I +RL QK+EEW RCR + NKVW+E+Y+KN +K+LDHRSFYF+
Sbjct: 434 LDMLEAVRKNTSRAMPLIHSRLVQKEEEWTRCREEMNKVWSEVYTKNCYKALDHRSFYFR 493

Query: 688 QQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQ 747
            QD K+L  K L  EIKE++EK R+E D +LAIAAGNRR ++P L +E+SD  IH D+YQ
Sbjct: 494 SQDKKALSTKVLLGEIKEVNEKGRREGDAMLAIAAGNRRPLLPDLRYEFSDLSIHGDMYQ 553

Query: 748 LIKYSCGEMCTT-EQLDKVMKIWTTFLEPMLGVPSRPQGAEDTEDVVKAKSHTVKSRAAS 806
           +IKYS  E+  + +  +K M++W  FL+PMLG+ SR +G ED E  VK +S         
Sbjct: 554 IIKYSSEEISNSPDHTEKTMQMWRMFLDPMLGLWSRSEGVEDMEKGVKGRS--------- 604

Query: 807 VGDSDGSPDGDAAAMTSKHSNPSRNG 832
              S+G+  GD  ++  + + P   G
Sbjct: 605 ---SEGN-GGDETSILERRTTPHEGG 626



 Score = 39.7 bits (91), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 1/58 (1%)

Query: 137 FVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFL 194
           F +K+K R    D  Y+ FL  LN++ +E     E+   V  +   H DL+E FT FL
Sbjct: 166 FFDKVKARLCSRD-TYQEFLKCLNIFSQEIIGREELQSLVGDILGKHADLMEGFTEFL 222


>gi|334183439|ref|NP_001185269.1| paired amphipathic helix protein Sin3-like 5 [Arabidopsis thaliana]
 gi|332195516|gb|AEE33637.1| paired amphipathic helix protein Sin3-like 5 [Arabidopsis thaliana]
          Length = 1152

 Score =  488 bits (1257), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 307/738 (41%), Positives = 395/738 (53%), Gaps = 175/738 (23%)

Query: 349  FSQELSFCEKVKDKLRDD---YQEFLRCLHLYTKEIITRSELQSLVG-------DLLGRY 398
            F   + F  ++K +   D   Y++FL  L++Y KE  + +E+   V        DLLG +
Sbjct: 127  FQVAIEFVNRIKARFGGDDRAYKKFLDILNMYRKETKSINEVYQEVTLLFQDHEDLLGEF 186

Query: 399  PDLMDGFNGFLA---------------------------------------------RCE 413
               +  F G ++                                             R +
Sbjct: 187  VHFLPDFRGSVSVNDPLFQRNTIPRDRNSTFPGMHPKHFEKKIKRSRHDEYTELSDQRED 246

Query: 414  KSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRLDKSVA 473
              E L+A   S +SL N+G+ P   KVED +  +  E + G         E+D       
Sbjct: 247  GDENLVA--YSAESLANQGQWPGYPKVEDTEGIQIYESNGG--------HERD------- 289

Query: 474  FVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAE 533
                D+G + ++ S+   ++AK I ELDL++C +CTPSYR LP +Y I   S R  LG +
Sbjct: 290  ---PDIGSQKNLLSTN--HMAKAINELDLTDCAQCTPSYRRLPDDYPIQIPSYRNSLGEK 344

Query: 534  VLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEK 593
            VLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESV+   KRVE LLEK
Sbjct: 345  VLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVSAAIKRVESLLEK 404

Query: 594  INNNTIKTDGPIRVEDHFTALNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQ 653
            INNNTI  + PI + +H + LNLRCIERLYGD+GLDVMD L+KN+ +ALPVILTRLKQKQ
Sbjct: 405  INNNTISIETPICIREHLSELNLRCIERLYGDYGLDVMDFLKKNSHIALPVILTRLKQKQ 464

Query: 654  EEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKE 713
            EEWARCR+DF KVWAE+Y+KN+HKSLDHRSFYFKQQDSK+L  K L AEIK+ISE+K KE
Sbjct: 465  EEWARCRADFRKVWAEVYAKNHHKSLDHRSFYFKQQDSKNLSTKGLVAEIKDISERKHKE 524

Query: 714  DDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLIKYSCGEMCTTEQLDKVMKIWTTFL 773
            D +L AIA G + S  P +EF Y+D  +H DLY+LIKY C E+C TEQ DKVMK+W TFL
Sbjct: 525  D-LLRAIAVGTKPSFTPDVEFIYTDTKVHTDLYKLIKYYCEEICATEQSDKVMKLWVTFL 583

Query: 774  EPMLGVPSRPQGAEDTEDVVKA---KSHTVKSRAASVGDSDGSPDGDAAAMTSKHSNPSR 830
            EPM GVPSR +  E  +DV K    + H   S A      DGS   +   +T        
Sbjct: 584  EPMFGVPSRSETIETMKDVAKIEDNQEHHDASEAVKENTCDGSMASNLKPLT-------- 635

Query: 831  NGDESIPPEQSSSSRAWLPNGDHGIKEDVSVEADHNARKSDNFCDSSEQDKVQNNAAMAD 890
                  PP+        +PN ++ + +  S   D       N  +S +QDK+ + AA   
Sbjct: 636  ------PPK--------MPNKENPMIQGSSFAQDLPV----NTGESIQQDKLHDVAA--- 674

Query: 891  ETSGISKQASTNERLIGTNAAIAAAADQSNGRSNIENTSGLSVAHSRPGNHIVEGGLELR 950
                I+ + S   +L+ T                               N ++  G+E R
Sbjct: 675  ----ITNEDSQPSKLVSTR------------------------------NDLIMEGVENR 700

Query: 951  SSNEILPSSEGGECSRQNISTNGVMTEGAKILRYNAESVKQFKIEREEGELSPNGDFEED 1010
            S                               R +  S+   K+EREEGELSP    E++
Sbjct: 701  S-------------------------------RVSDVSMGGHKVEREEGELSPTESCEQE 729

Query: 1011 NFAVYGESGLEAVHKAKD 1028
            NF VY E+GLE V K  D
Sbjct: 730  NFEVYKENGLEPVQKLPD 747



 Score =  279 bits (714), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 152/256 (59%), Positives = 181/256 (70%), Gaps = 4/256 (1%)

Query: 1   MKRSRDEVYMNSQIKRPMISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQ 60
           MKR R+EVY+  Q++ P +SSRGE +G+   + GGG  G       DAL YLKAVKD+FQ
Sbjct: 1   MKRVREEVYVEPQMRGPTVSSRGETNGRPSTISGGGTTGGLTTV--DALTYLKAVKDMFQ 58

Query: 61  DKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLED 120
           D +EKY+ FL VMKDFKAQR+DT GVIARVK+LFKG+ DL+LGFNTFLPKGY+ITL  ED
Sbjct: 59  DNKEKYETFLGVMKDFKAQRVDTNGVIARVKDLFKGYDDLLLGFNTFLPKGYKITLQPED 118

Query: 121 EQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALF 180
           E+P  KKPV+F+ AI FVN+IK RF GDD  YK FLDILNMYRKE KSI EVYQEV  LF
Sbjct: 119 EKP--KKPVDFQVAIEFVNRIKARFGGDDRAYKKFLDILNMYRKETKSINEVYQEVTLLF 176

Query: 181 QDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQVHVDKKERAMASHA 240
           QDH DLL EF HFLPD  G+ S++     RN+I RDR+S  P     H +KK +      
Sbjct: 177 QDHEDLLGEFVHFLPDFRGSVSVNDPLFQRNTIPRDRNSTFPGMHPKHFEKKIKRSRHDE 236

Query: 241 DRDLSVDRPDPDHDRV 256
             +LS  R D D + V
Sbjct: 237 YTELSDQREDGDENLV 252


>gi|334183433|ref|NP_176197.3| paired amphipathic helix protein Sin3-like 5 [Arabidopsis thaliana]
 gi|357529151|sp|Q9XIE1.3|SNL5_ARATH RecName: Full=Paired amphipathic helix protein Sin3-like 5
 gi|332195513|gb|AEE33634.1| paired amphipathic helix protein Sin3-like 5 [Arabidopsis thaliana]
          Length = 1162

 Score =  488 bits (1257), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 307/738 (41%), Positives = 395/738 (53%), Gaps = 175/738 (23%)

Query: 349  FSQELSFCEKVKDKLRDD---YQEFLRCLHLYTKEIITRSELQSLVG-------DLLGRY 398
            F   + F  ++K +   D   Y++FL  L++Y KE  + +E+   V        DLLG +
Sbjct: 127  FQVAIEFVNRIKARFGGDDRAYKKFLDILNMYRKETKSINEVYQEVTLLFQDHEDLLGEF 186

Query: 399  PDLMDGFNGFLA---------------------------------------------RCE 413
               +  F G ++                                             R +
Sbjct: 187  VHFLPDFRGSVSVNDPLFQRNTIPRDRNSTFPGMHPKHFEKKIKRSRHDEYTELSDQRED 246

Query: 414  KSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRLDKSVA 473
              E L+A   S +SL N+G+ P   KVED +  +  E + G         E+D       
Sbjct: 247  GDENLVA--YSAESLANQGQWPGYPKVEDTEGIQIYESNGG--------HERD------- 289

Query: 474  FVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAE 533
                D+G + ++ S+   ++AK I ELDL++C +CTPSYR LP +Y I   S R  LG +
Sbjct: 290  ---PDIGSQKNLLSTN--HMAKAINELDLTDCAQCTPSYRRLPDDYPIQIPSYRNSLGEK 344

Query: 534  VLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEK 593
            VLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESV+   KRVE LLEK
Sbjct: 345  VLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVSAAIKRVESLLEK 404

Query: 594  INNNTIKTDGPIRVEDHFTALNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQ 653
            INNNTI  + PI + +H + LNLRCIERLYGD+GLDVMD L+KN+ +ALPVILTRLKQKQ
Sbjct: 405  INNNTISIETPICIREHLSELNLRCIERLYGDYGLDVMDFLKKNSHIALPVILTRLKQKQ 464

Query: 654  EEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKE 713
            EEWARCR+DF KVWAE+Y+KN+HKSLDHRSFYFKQQDSK+L  K L AEIK+ISE+K KE
Sbjct: 465  EEWARCRADFRKVWAEVYAKNHHKSLDHRSFYFKQQDSKNLSTKGLVAEIKDISERKHKE 524

Query: 714  DDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLIKYSCGEMCTTEQLDKVMKIWTTFL 773
            D +L AIA G + S  P +EF Y+D  +H DLY+LIKY C E+C TEQ DKVMK+W TFL
Sbjct: 525  D-LLRAIAVGTKPSFTPDVEFIYTDTKVHTDLYKLIKYYCEEICATEQSDKVMKLWVTFL 583

Query: 774  EPMLGVPSRPQGAEDTEDVVKA---KSHTVKSRAASVGDSDGSPDGDAAAMTSKHSNPSR 830
            EPM GVPSR +  E  +DV K    + H   S A      DGS   +   +T        
Sbjct: 584  EPMFGVPSRSETIETMKDVAKIEDNQEHHDASEAVKENTCDGSMASNLKPLT-------- 635

Query: 831  NGDESIPPEQSSSSRAWLPNGDHGIKEDVSVEADHNARKSDNFCDSSEQDKVQNNAAMAD 890
                  PP+        +PN ++ + +  S   D       N  +S +QDK+ + AA   
Sbjct: 636  ------PPK--------MPNKENPMIQGSSFAQDLPV----NTGESIQQDKLHDVAA--- 674

Query: 891  ETSGISKQASTNERLIGTNAAIAAAADQSNGRSNIENTSGLSVAHSRPGNHIVEGGLELR 950
                I+ + S   +L+ T                               N ++  G+E R
Sbjct: 675  ----ITNEDSQPSKLVSTR------------------------------NDLIMEGVENR 700

Query: 951  SSNEILPSSEGGECSRQNISTNGVMTEGAKILRYNAESVKQFKIEREEGELSPNGDFEED 1010
            S                               R +  S+   K+EREEGELSP    E++
Sbjct: 701  S-------------------------------RVSDVSMGGHKVEREEGELSPTESCEQE 729

Query: 1011 NFAVYGESGLEAVHKAKD 1028
            NF VY E+GLE V K  D
Sbjct: 730  NFEVYKENGLEPVQKLPD 747



 Score =  279 bits (714), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 152/256 (59%), Positives = 181/256 (70%), Gaps = 4/256 (1%)

Query: 1   MKRSRDEVYMNSQIKRPMISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQ 60
           MKR R+EVY+  Q++ P +SSRGE +G+   + GGG  G       DAL YLKAVKD+FQ
Sbjct: 1   MKRVREEVYVEPQMRGPTVSSRGETNGRPSTISGGGTTGGLTTV--DALTYLKAVKDMFQ 58

Query: 61  DKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLED 120
           D +EKY+ FL VMKDFKAQR+DT GVIARVK+LFKG+ DL+LGFNTFLPKGY+ITL  ED
Sbjct: 59  DNKEKYETFLGVMKDFKAQRVDTNGVIARVKDLFKGYDDLLLGFNTFLPKGYKITLQPED 118

Query: 121 EQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALF 180
           E+P  KKPV+F+ AI FVN+IK RF GDD  YK FLDILNMYRKE KSI EVYQEV  LF
Sbjct: 119 EKP--KKPVDFQVAIEFVNRIKARFGGDDRAYKKFLDILNMYRKETKSINEVYQEVTLLF 176

Query: 181 QDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQVHVDKKERAMASHA 240
           QDH DLL EF HFLPD  G+ S++     RN+I RDR+S  P     H +KK +      
Sbjct: 177 QDHEDLLGEFVHFLPDFRGSVSVNDPLFQRNTIPRDRNSTFPGMHPKHFEKKIKRSRHDE 236

Query: 241 DRDLSVDRPDPDHDRV 256
             +LS  R D D + V
Sbjct: 237 YTELSDQREDGDENLV 252


>gi|297843852|ref|XP_002889807.1| paired amphipathic helix repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
 gi|297335649|gb|EFH66066.1| paired amphipathic helix repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 1124

 Score =  488 bits (1255), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 306/714 (42%), Positives = 395/714 (55%), Gaps = 137/714 (19%)

Query: 349  FSQELSFCEKVKDKLRDD---YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGF 405
            F   + F  K+K +  DD   Y+ FL  L++Y KE  + SE+   V  L   + DL+  F
Sbjct: 115  FKDAIGFVTKIKTRFGDDEHAYKRFLDILNMYRKERKSISEVYEEVTMLFKGHEDLLMEF 174

Query: 406  NGFLARCEKSEELLADVMSK------KSLWNEGRIPKSVKVEDRDRDRDRERDDGVKD-- 457
              FL  C +S     + + +       ++ ++ +  +  K+ED     D +R+DG ++  
Sbjct: 175  VNFLPNCPESAPSANNAVPRHKGTAITAMHSDKKRKQRRKLEDYSGHSD-QREDGDENLV 233

Query: 458  ----------------RDREARE------KDRLDKSVAFVNKDVGPKMSMYSSKDKYLAK 495
                            RD E RE       DR +KS A  ++D+G     + S  KY+  
Sbjct: 234  ACSADSPVGEGQPGYFRDYENREDTETDTADRTEKSAASGSQDIGN----HKSTTKYVGT 289

Query: 496  PIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMR 555
            PI ELDLS C +CTPSYRLLPK+Y +   S R  LG + LNDH VSVTSGSEDYSF HMR
Sbjct: 290  PINELDLSECTQCTPSYRLLPKDYAVEIPSYRNTLGKKTLNDHLVSVTSGSEDYSFSHMR 349

Query: 556  KNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFTALN 615
            KNQYEESLFRCEDDR+E+DMLL SV+   K VE LLEK+NNNTI  D  I +E H +A+N
Sbjct: 350  KNQYEESLFRCEDDRYEMDMLLGSVSSAIKHVEILLEKMNNNTISVDSTICIEKHLSAIN 409

Query: 616  LRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNY 675
            LRCIERLYGD+GLDVMD+L+KN   ALPVILTRLKQKQEEWARC SDF KVWAE+Y+KN+
Sbjct: 410  LRCIERLYGDNGLDVMDLLKKNMHSALPVILTRLKQKQEEWARCHSDFQKVWAEVYAKNH 469

Query: 676  HKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEFE 735
            HKSLDHRSFYFKQQDSK+L  K L AE+K+ISEKK +ED +L AI+     S  P LEF 
Sbjct: 470  HKSLDHRSFYFKQQDSKNLSTKCLVAEVKDISEKKHQED-LLQAISVRVMPSFTPDLEFN 528

Query: 736  YSDPDIHEDLYQLIKYSCGEMCTTEQLDKVMKIWTTFLEPMLGVPSRPQGAEDTEDVVKA 795
            Y D  IHEDLY LIKY C E+C TEQ DKVMK+W TFLEPM G+ SR QG    EDV K 
Sbjct: 529  YCDIQIHEDLYLLIKYYCEEICATEQSDKVMKLWITFLEPMFGILSRSQGNHALEDVSKL 588

Query: 796  KSHT-VKSRAASVGDSDGSPDGDAAAMTSKHSNPSRNGDESIPPEQSSSSRAWLPNGDHG 854
            K++  ++    +V D+       A+    KH    +  ++  P  Q SS R         
Sbjct: 589  KNNQELQDACVAVKDT-------ASGSNLKHPISPKLLNKDNPTMQGSSPR--------- 632

Query: 855  IKEDVSVEADHNARKSDNFCDSSEQDKVQNNAAMADETSGISKQASTNERLIGTNAAIAA 914
              +DVS           N   +++ DK+Q++AAM            TNE +I ++  ++ 
Sbjct: 633  --KDVS----------GNIMKTAQPDKLQDDAAM------------TNE-VIQSSKLVSP 667

Query: 915  AADQSNGRSNIENTSGLSVAHSRPGNHIVEGGLELRSSNEILPSSEGGECSRQNISTNGV 974
              DQ                    GNH+V                               
Sbjct: 668  RNDQ---------------IMEDEGNHMV------------------------------- 681

Query: 975  MTEGAKILRYNAESVKQFKIEREEGELSPNGDFEEDNFAVYGESGLEAVHKAKD 1028
                      N  SV++ ++EREEGELSP    E+DNF V G++G + + K  D
Sbjct: 682  ----------NEASVEKHEVEREEGELSPTPSREQDNFEVNGQNGFKPLQKVTD 725



 Score =  238 bits (608), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 133/267 (49%), Positives = 173/267 (64%), Gaps = 35/267 (13%)

Query: 1   MKRSRDEVYMNSQIKRPMISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQ 60
           MKR R++V+     +RP +SSRGE + Q + +              DAL YLKAVKDIFQ
Sbjct: 1   MKRVREDVHTEPNKRRPEVSSRGETNKQPRTI--------------DALTYLKAVKDIFQ 46

Query: 61  DKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLED 120
           D +EKY+ FLE+MK+FKA  IDT GVI R+K LFKG++DL+LGFNTFLPKGY ITL  E+
Sbjct: 47  DNKEKYESFLELMKEFKAHTIDTDGVIERIKVLFKGYKDLLLGFNTFLPKGYRITLLPEE 106

Query: 121 EQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALF 180
           E+  PK  V+F++AI FV KIKTRF  D+H YK FLDILNMYRKE KSI+EVY+EV  LF
Sbjct: 107 EK--PKVRVDFKDAIGFVTKIKTRFGDDEHAYKRFLDILNMYRKERKSISEVYEEVTMLF 164

Query: 181 QDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQVHVDKKERA----- 235
           + H DLL EF +FLP+   +A     PS  N++ R + +A+     +H DKK +      
Sbjct: 165 KGHEDLLMEFVNFLPNCPESA-----PSANNAVPRHKGTAITA---MHSDKKRKQRRKLE 216

Query: 236 -MASHADRDLSVDRPDPDHDRVLLKSD 261
             + H+D+     R D D + V   +D
Sbjct: 217 DYSGHSDQ-----REDGDENLVACSAD 238


>gi|334183437|ref|NP_001185268.1| paired amphipathic helix protein Sin3-like 5 [Arabidopsis thaliana]
 gi|332195515|gb|AEE33636.1| paired amphipathic helix protein Sin3-like 5 [Arabidopsis thaliana]
          Length = 1167

 Score =  487 bits (1253), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 284/606 (46%), Positives = 354/606 (58%), Gaps = 118/606 (19%)

Query: 426  KSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRLDKSVAFVNKDVGPKMSM 485
            KSL N+G+ P   KVED +  +  E + G         E+D           D+G + ++
Sbjct: 262  KSLANQGQWPGYPKVEDTEGIQIYESNGG--------HERD----------PDIGSQKNL 303

Query: 486  YSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSG 545
             S+   ++AK I ELDL++C +CTPSYR LP +Y I   S R  LG +VLNDHWVSVTSG
Sbjct: 304  LSTN--HMAKAINELDLTDCAQCTPSYRRLPDDYPIQIPSYRNSLGEKVLNDHWVSVTSG 361

Query: 546  SEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPI 605
            SEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESV+   KRVE LLEKINNNTI  + PI
Sbjct: 362  SEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVSAAIKRVESLLEKINNNTISIETPI 421

Query: 606  RVEDHFTALNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNK 665
             + +H + LNLRCIERLYGD+GLDVMD L+KN+ +ALPVILTRLKQKQEEWARCR+DF K
Sbjct: 422  CIREHLSELNLRCIERLYGDYGLDVMDFLKKNSHIALPVILTRLKQKQEEWARCRADFRK 481

Query: 666  VWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNR 725
            VWAE+Y+KN+HKSLDHRSFYFKQQDSK+L  K L AEIK+ISE+K KED +L AIA G +
Sbjct: 482  VWAEVYAKNHHKSLDHRSFYFKQQDSKNLSTKGLVAEIKDISERKHKED-LLRAIAVGTK 540

Query: 726  RSIVPHLEFEYSDPDIHEDLYQLIKYSCGEMCTTEQLDKVMKIWTTFLEPMLGVPSRPQG 785
             S  P +EF Y+D  +H DLY+LIKY C E+C TEQ DKVMK+W TFLEPM GVPSR + 
Sbjct: 541  PSFTPDVEFIYTDTKVHTDLYKLIKYYCEEICATEQSDKVMKLWVTFLEPMFGVPSRSET 600

Query: 786  AEDTEDVVKA---KSHTVKSRAASVGDSDGSPDGDAAAMTSKHSNPSRNGDESIPPEQSS 842
             E  +DV K    + H   S A      DGS   +   +T              PP+   
Sbjct: 601  IETMKDVAKIEDNQEHHDASEAVKENTCDGSMASNLKPLT--------------PPK--- 643

Query: 843  SSRAWLPNGDHGIKEDVSVEADHNARKSDNFCDSSEQDKVQNNAAMADETSGISKQASTN 902
                 +PN ++ + +  S   D       N  +S +QDK+ + AA       I+ + S  
Sbjct: 644  -----MPNKENPMIQGSSFAQDLPV----NTGESIQQDKLHDVAA-------ITNEDSQP 687

Query: 903  ERLIGTNAAIAAAADQSNGRSNIENTSGLSVAHSRPGNHIVEGGLELRSSNEILPSSEGG 962
             +L+ T                               N ++  G+E RS           
Sbjct: 688  SKLVSTR------------------------------NDLIMEGVENRS----------- 706

Query: 963  ECSRQNISTNGVMTEGAKILRYNAESVKQFKIEREEGELSPNGDFEEDNFAVYGESGLEA 1022
                                R +  S+   K+EREEGELSP    E++NF VY E+GLE 
Sbjct: 707  --------------------RVSDVSMGGHKVEREEGELSPTESCEQENFEVYKENGLEP 746

Query: 1023 VHKAKD 1028
            V K  D
Sbjct: 747  VQKLPD 752



 Score =  279 bits (714), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 152/256 (59%), Positives = 181/256 (70%), Gaps = 4/256 (1%)

Query: 1   MKRSRDEVYMNSQIKRPMISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQ 60
           MKR R+EVY+  Q++ P +SSRGE +G+   + GGG  G       DAL YLKAVKD+FQ
Sbjct: 1   MKRVREEVYVEPQMRGPTVSSRGETNGRPSTISGGGTTGGLTTV--DALTYLKAVKDMFQ 58

Query: 61  DKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLED 120
           D +EKY+ FL VMKDFKAQR+DT GVIARVK+LFKG+ DL+LGFNTFLPKGY+ITL  ED
Sbjct: 59  DNKEKYETFLGVMKDFKAQRVDTNGVIARVKDLFKGYDDLLLGFNTFLPKGYKITLQPED 118

Query: 121 EQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALF 180
           E+P  KKPV+F+ AI FVN+IK RF GDD  YK FLDILNMYRKE KSI EVYQEV  LF
Sbjct: 119 EKP--KKPVDFQVAIEFVNRIKARFGGDDRAYKKFLDILNMYRKETKSINEVYQEVTLLF 176

Query: 181 QDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQVHVDKKERAMASHA 240
           QDH DLL EF HFLPD  G+ S++     RN+I RDR+S  P     H +KK +      
Sbjct: 177 QDHEDLLGEFVHFLPDFRGSVSVNDPLFQRNTIPRDRNSTFPGMHPKHFEKKIKRSRHDE 236

Query: 241 DRDLSVDRPDPDHDRV 256
             +LS  R D D + V
Sbjct: 237 YTELSDQREDGDENLV 252


>gi|334183435|ref|NP_001185267.1| paired amphipathic helix protein Sin3-like 5 [Arabidopsis thaliana]
 gi|332195514|gb|AEE33635.1| paired amphipathic helix protein Sin3-like 5 [Arabidopsis thaliana]
          Length = 1158

 Score =  481 bits (1239), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 307/738 (41%), Positives = 395/738 (53%), Gaps = 179/738 (24%)

Query: 349  FSQELSFCEKVKDKLRDD---YQEFLRCLHLYTKEIITRSELQSLVG-------DLLGRY 398
            F   + F  ++K +   D   Y++FL  L++Y KE  + +E+   V        DLLG +
Sbjct: 127  FQVAIEFVNRIKARFGGDDRAYKKFLDILNMYRKETKSINEVYQEVTLLFQDHEDLLGEF 186

Query: 399  PDLMDGFNGFLA---------------------------------------------RCE 413
               +  F G ++                                             R +
Sbjct: 187  VHFLPDFRGSVSVNDPLFQRNTIPRDRNSTFPGMHPKHFEKKIKRSRHDEYTELSDQRED 246

Query: 414  KSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRLDKSVA 473
              E L+A   S +SL N+G+ P   KVED +  +  E + G         E+D       
Sbjct: 247  GDENLVA--YSAESLANQGQWPGYPKVEDTEGIQIYESNGG--------HERD------- 289

Query: 474  FVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAE 533
                D+G + ++ S+   ++AK I ELDL++C +CTPSYR LP +  IPS   R  LG +
Sbjct: 290  ---PDIGSQKNLLSTN--HMAKAINELDLTDCAQCTPSYRRLPDD--IPS--YRNSLGEK 340

Query: 534  VLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEK 593
            VLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESV+   KRVE LLEK
Sbjct: 341  VLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVSAAIKRVESLLEK 400

Query: 594  INNNTIKTDGPIRVEDHFTALNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQ 653
            INNNTI  + PI + +H + LNLRCIERLYGD+GLDVMD L+KN+ +ALPVILTRLKQKQ
Sbjct: 401  INNNTISIETPICIREHLSELNLRCIERLYGDYGLDVMDFLKKNSHIALPVILTRLKQKQ 460

Query: 654  EEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKE 713
            EEWARCR+DF KVWAE+Y+KN+HKSLDHRSFYFKQQDSK+L  K L AEIK+ISE+K KE
Sbjct: 461  EEWARCRADFRKVWAEVYAKNHHKSLDHRSFYFKQQDSKNLSTKGLVAEIKDISERKHKE 520

Query: 714  DDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLIKYSCGEMCTTEQLDKVMKIWTTFL 773
            D +L AIA G + S  P +EF Y+D  +H DLY+LIKY C E+C TEQ DKVMK+W TFL
Sbjct: 521  D-LLRAIAVGTKPSFTPDVEFIYTDTKVHTDLYKLIKYYCEEICATEQSDKVMKLWVTFL 579

Query: 774  EPMLGVPSRPQGAEDTEDVVKA---KSHTVKSRAASVGDSDGSPDGDAAAMTSKHSNPSR 830
            EPM GVPSR +  E  +DV K    + H   S A      DGS   +   +T        
Sbjct: 580  EPMFGVPSRSETIETMKDVAKIEDNQEHHDASEAVKENTCDGSMASNLKPLT-------- 631

Query: 831  NGDESIPPEQSSSSRAWLPNGDHGIKEDVSVEADHNARKSDNFCDSSEQDKVQNNAAMAD 890
                  PP+        +PN ++ + +  S   D       N  +S +QDK+ + AA   
Sbjct: 632  ------PPK--------MPNKENPMIQGSSFAQDLPV----NTGESIQQDKLHDVAA--- 670

Query: 891  ETSGISKQASTNERLIGTNAAIAAAADQSNGRSNIENTSGLSVAHSRPGNHIVEGGLELR 950
                I+ + S   +L+ T                               N ++  G+E R
Sbjct: 671  ----ITNEDSQPSKLVSTR------------------------------NDLIMEGVENR 696

Query: 951  SSNEILPSSEGGECSRQNISTNGVMTEGAKILRYNAESVKQFKIEREEGELSPNGDFEED 1010
            S                               R +  S+   K+EREEGELSP    E++
Sbjct: 697  S-------------------------------RVSDVSMGGHKVEREEGELSPTESCEQE 725

Query: 1011 NFAVYGESGLEAVHKAKD 1028
            NF VY E+GLE V K  D
Sbjct: 726  NFEVYKENGLEPVQKLPD 743



 Score =  279 bits (714), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 152/256 (59%), Positives = 181/256 (70%), Gaps = 4/256 (1%)

Query: 1   MKRSRDEVYMNSQIKRPMISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQ 60
           MKR R+EVY+  Q++ P +SSRGE +G+   + GGG  G       DAL YLKAVKD+FQ
Sbjct: 1   MKRVREEVYVEPQMRGPTVSSRGETNGRPSTISGGGTTGGLTTV--DALTYLKAVKDMFQ 58

Query: 61  DKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLED 120
           D +EKY+ FL VMKDFKAQR+DT GVIARVK+LFKG+ DL+LGFNTFLPKGY+ITL  ED
Sbjct: 59  DNKEKYETFLGVMKDFKAQRVDTNGVIARVKDLFKGYDDLLLGFNTFLPKGYKITLQPED 118

Query: 121 EQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALF 180
           E+P  KKPV+F+ AI FVN+IK RF GDD  YK FLDILNMYRKE KSI EVYQEV  LF
Sbjct: 119 EKP--KKPVDFQVAIEFVNRIKARFGGDDRAYKKFLDILNMYRKETKSINEVYQEVTLLF 176

Query: 181 QDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQVHVDKKERAMASHA 240
           QDH DLL EF HFLPD  G+ S++     RN+I RDR+S  P     H +KK +      
Sbjct: 177 QDHEDLLGEFVHFLPDFRGSVSVNDPLFQRNTIPRDRNSTFPGMHPKHFEKKIKRSRHDE 236

Query: 241 DRDLSVDRPDPDHDRV 256
             +LS  R D D + V
Sbjct: 237 YTELSDQREDGDENLV 252


>gi|334182431|ref|NP_172515.2| paired amphipathic helix protein Sin3-like 6 [Arabidopsis thaliana]
 gi|332190459|gb|AEE28580.1| paired amphipathic helix protein Sin3-like 6 [Arabidopsis thaliana]
          Length = 1122

 Score =  473 bits (1216), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 303/713 (42%), Positives = 386/713 (54%), Gaps = 136/713 (19%)

Query: 349  FSQELSFCEKVKDKLRDD---YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGF 405
            F   + F  K+K +  DD   Y+ FL  L+LY KE  + SE+   V  L   + DL+  F
Sbjct: 115  FKDAIGFVTKIKTRFGDDEHAYKRFLDILNLYRKEKKSISEVYEEVTMLFKGHEDLLMEF 174

Query: 406  NGFLARCEKSEELLADVM------SKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKD-- 457
              FL  C +S     + +      +  ++ ++ +  +  K+ED     D +R+DG ++  
Sbjct: 175  VNFLPNCPESAPSTKNAVPRHKGTATTAMHSDKKRKQRCKLEDYSGHSD-QREDGDENLV 233

Query: 458  ----------------RDREARE------KDRLDKSVAFVNKDVGPKMSMYSSKDKYLAK 495
                            RD E RE       DR +KS A  ++D+G     + S  KY+  
Sbjct: 234  TCSADSPVGEGQPGYFRDYENREDTETDTADRTEKSAASGSQDIGN----HKSTTKYVGT 289

Query: 496  PIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMR 555
            PI ELDLS C +CTPSYRLLPK+Y +   S R  LG + LNDH VSVTSGSEDYSF HMR
Sbjct: 290  PINELDLSECTQCTPSYRLLPKDYAVEIPSYRNTLGKKTLNDHLVSVTSGSEDYSFSHMR 349

Query: 556  KNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFTALN 615
            KNQYEESLFRCEDDR+E+DMLL SV+   K+VE LLEK+NNNTI  D  I +E H +A+N
Sbjct: 350  KNQYEESLFRCEDDRYEMDMLLGSVSSAIKQVEILLEKMNNNTISVDSTICIEKHLSAMN 409

Query: 616  LRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNY 675
            LRCIERLYGD+GLDVMD+L+KN   ALPVILTRLKQKQEEWARC SDF KVWAE+Y+KN+
Sbjct: 410  LRCIERLYGDNGLDVMDLLKKNMHSALPVILTRLKQKQEEWARCHSDFQKVWAEVYAKNH 469

Query: 676  HKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEFE 735
            HKSLDHRSFYFKQQDSK+L  K L AE+K+ISEKK +ED +L AIA        P LEF 
Sbjct: 470  HKSLDHRSFYFKQQDSKNLSTKCLVAEVKDISEKKHQED-LLQAIAVRVMPLFTPDLEFN 528

Query: 736  YSDPDIHEDLYQLIKYSCGEMCTTEQLDKVMKIWTTFLEPMLGVPSRPQGAEDTEDVVKA 795
            Y D  IHEDLY LIKY C E+C TEQ DKVMK+W TFLEP+ G+ SR Q     EDV K 
Sbjct: 529  YCDTQIHEDLYLLIKYYCEEICATEQSDKVMKLWITFLEPIFGILSRSQDNLALEDVSKL 588

Query: 796  KSHTVKSRAASVGDSDGSPDGDAAAMTSKHSNPSRNGDESIPPEQSSSSRAWLPNGDHGI 855
            K++        + D+  +    A+    KH    +   +     Q SSSR          
Sbjct: 589  KNNR------ELQDACLAVKETASGSNRKHPISPKRLSKDNTKMQGSSSR---------- 632

Query: 856  KEDVSVEADHNARKSDNFCDSSEQDKVQNNAAMADETSGISKQASTNERLIGTNAAIAAA 915
             EDVS               +++ DK+Q++AAM            TNE +I ++  ++  
Sbjct: 633  -EDVSANIK---------VKTAQPDKLQDDAAM------------TNE-VIQSSKFVSPK 669

Query: 916  ADQSNGRSNIENTSGLSVAHSRPGNHIVEGGLELRSSNEILPSSEGGECSRQNISTNGVM 975
             DQ                    GNH+V                                
Sbjct: 670  NDQ---------------IMEDEGNHMV-------------------------------- 682

Query: 976  TEGAKILRYNAESVKQFKIEREEGELSPNGDFEEDNFAVYGESGLEAVHKAKD 1028
                     NA SV+  K E EEGELSP    E+ NF V G++  + + K  D
Sbjct: 683  ---------NAASVE--KHELEEGELSPTASREQSNFEVNGQNAFKPLQKVTD 724



 Score =  241 bits (616), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 132/262 (50%), Positives = 174/262 (66%), Gaps = 25/262 (9%)

Query: 1   MKRSRDEVYMNSQIKRPMISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQ 60
           MKR+R++V+ ++Q ++P +SSRGE +   + +              DAL YLKAVKDIF 
Sbjct: 1   MKRAREDVHTDTQKRKPEVSSRGETNKLPRTI--------------DALTYLKAVKDIFH 46

Query: 61  DKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLED 120
           D +EKY+ FLE+MK+FKAQ IDT GVI R+K LFKG+RDL+LGFNTFLPKGY+ITL  E+
Sbjct: 47  DNKEKYESFLELMKEFKAQTIDTNGVIERIKVLFKGYRDLLLGFNTFLPKGYKITLLPEE 106

Query: 121 EQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALF 180
           E+  PK  V+F++AI FV KIKTRF  D+H YK FLDILN+YRKE KSI+EVY+EV  LF
Sbjct: 107 EK--PKIRVDFKDAIGFVTKIKTRFGDDEHAYKRFLDILNLYRKEKKSISEVYEEVTMLF 164

Query: 181 QDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQVHVDKKERAMASHA 240
           + H DLL EF +FLP+   +A     PS +N++ R + +A      +H DKK +      
Sbjct: 165 KGHEDLLMEFVNFLPNCPESA-----PSTKNAVPRHKGTATTA---MHSDKKRKQRCKLE 216

Query: 241 DRDLSVD-RPDPDHDRVLLKSD 261
           D     D R D D + V   +D
Sbjct: 217 DYSGHSDQREDGDENLVTCSAD 238


>gi|296439822|sp|Q9XIK6.2|SNL6_ARATH RecName: Full=Paired amphipathic helix protein Sin3-like 6
          Length = 1173

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 303/713 (42%), Positives = 386/713 (54%), Gaps = 136/713 (19%)

Query: 349  FSQELSFCEKVKDKLRDD---YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGF 405
            F   + F  K+K +  DD   Y+ FL  L+LY KE  + SE+   V  L   + DL+  F
Sbjct: 166  FKDAIGFVTKIKTRFGDDEHAYKRFLDILNLYRKEKKSISEVYEEVTMLFKGHEDLLMEF 225

Query: 406  NGFLARCEKSEELLADVM------SKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKD-- 457
              FL  C +S     + +      +  ++ ++ +  +  K+ED     D +R+DG ++  
Sbjct: 226  VNFLPNCPESAPSTKNAVPRHKGTATTAMHSDKKRKQRCKLEDYSGHSD-QREDGDENLV 284

Query: 458  ----------------RDREARE------KDRLDKSVAFVNKDVGPKMSMYSSKDKYLAK 495
                            RD E RE       DR +KS A  ++D+G     + S  KY+  
Sbjct: 285  TCSADSPVGEGQPGYFRDYENREDTETDTADRTEKSAASGSQDIGN----HKSTTKYVGT 340

Query: 496  PIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMR 555
            PI ELDLS C +CTPSYRLLPK+Y +   S R  LG + LNDH VSVTSGSEDYSF HMR
Sbjct: 341  PINELDLSECTQCTPSYRLLPKDYAVEIPSYRNTLGKKTLNDHLVSVTSGSEDYSFSHMR 400

Query: 556  KNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFTALN 615
            KNQYEESLFRCEDDR+E+DMLL SV+   K+VE LLEK+NNNTI  D  I +E H +A+N
Sbjct: 401  KNQYEESLFRCEDDRYEMDMLLGSVSSAIKQVEILLEKMNNNTISVDSTICIEKHLSAMN 460

Query: 616  LRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNY 675
            LRCIERLYGD+GLDVMD+L+KN   ALPVILTRLKQKQEEWARC SDF KVWAE+Y+KN+
Sbjct: 461  LRCIERLYGDNGLDVMDLLKKNMHSALPVILTRLKQKQEEWARCHSDFQKVWAEVYAKNH 520

Query: 676  HKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEFE 735
            HKSLDHRSFYFKQQDSK+L  K L AE+K+ISEKK +ED +L AIA        P LEF 
Sbjct: 521  HKSLDHRSFYFKQQDSKNLSTKCLVAEVKDISEKKHQED-LLQAIAVRVMPLFTPDLEFN 579

Query: 736  YSDPDIHEDLYQLIKYSCGEMCTTEQLDKVMKIWTTFLEPMLGVPSRPQGAEDTEDVVKA 795
            Y D  IHEDLY LIKY C E+C TEQ DKVMK+W TFLEP+ G+ SR Q     EDV K 
Sbjct: 580  YCDTQIHEDLYLLIKYYCEEICATEQSDKVMKLWITFLEPIFGILSRSQDNLALEDVSKL 639

Query: 796  KSHTVKSRAASVGDSDGSPDGDAAAMTSKHSNPSRNGDESIPPEQSSSSRAWLPNGDHGI 855
            K++        + D+  +    A+    KH    +   +     Q SSSR          
Sbjct: 640  KNNR------ELQDACLAVKETASGSNRKHPISPKRLSKDNTKMQGSSSR---------- 683

Query: 856  KEDVSVEADHNARKSDNFCDSSEQDKVQNNAAMADETSGISKQASTNERLIGTNAAIAAA 915
             EDVS               +++ DK+Q++AAM            TNE +I ++  ++  
Sbjct: 684  -EDVSANIK---------VKTAQPDKLQDDAAM------------TNE-VIQSSKFVSPK 720

Query: 916  ADQSNGRSNIENTSGLSVAHSRPGNHIVEGGLELRSSNEILPSSEGGECSRQNISTNGVM 975
             DQ                    GNH+V                                
Sbjct: 721  NDQ---------------IMEDEGNHMV-------------------------------- 733

Query: 976  TEGAKILRYNAESVKQFKIEREEGELSPNGDFEEDNFAVYGESGLEAVHKAKD 1028
                     NA SV+  K E EEGELSP    E+ NF V G++  + + K  D
Sbjct: 734  ---------NAASVE--KHELEEGELSPTASREQSNFEVNGQNAFKPLQKVTD 775



 Score =  241 bits (615), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 132/262 (50%), Positives = 174/262 (66%), Gaps = 25/262 (9%)

Query: 1   MKRSRDEVYMNSQIKRPMISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQ 60
           MKR+R++V+ ++Q ++P +SSRGE +   + +              DAL YLKAVKDIF 
Sbjct: 52  MKRAREDVHTDTQKRKPEVSSRGETNKLPRTI--------------DALTYLKAVKDIFH 97

Query: 61  DKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLED 120
           D +EKY+ FLE+MK+FKAQ IDT GVI R+K LFKG+RDL+LGFNTFLPKGY+ITL  E+
Sbjct: 98  DNKEKYESFLELMKEFKAQTIDTNGVIERIKVLFKGYRDLLLGFNTFLPKGYKITLLPEE 157

Query: 121 EQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALF 180
           E+  PK  V+F++AI FV KIKTRF  D+H YK FLDILN+YRKE KSI+EVY+EV  LF
Sbjct: 158 EK--PKIRVDFKDAIGFVTKIKTRFGDDEHAYKRFLDILNLYRKEKKSISEVYEEVTMLF 215

Query: 181 QDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQVHVDKKERAMASHA 240
           + H DLL EF +FLP+   +A     PS +N++ R + +A      +H DKK +      
Sbjct: 216 KGHEDLLMEFVNFLPNCPESA-----PSTKNAVPRHKGTATTA---MHSDKKRKQRCKLE 267

Query: 241 DRDLSVD-RPDPDHDRVLLKSD 261
           D     D R D D + V   +D
Sbjct: 268 DYSGHSDQREDGDENLVTCSAD 289


>gi|297850770|ref|XP_002893266.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297339108|gb|EFH69525.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 556

 Score =  466 bits (1200), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 291/599 (48%), Positives = 367/599 (61%), Gaps = 109/599 (18%)

Query: 36  GGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFK 95
           GG  AQKLTTN   AYLKAVKD FQD+R KYD+FLEVMK+FK+QR  T     RV     
Sbjct: 3   GGASAQKLTTN---AYLKAVKDKFQDQRGKYDEFLEVMKNFKSQR--TFQRTPRVD---- 53

Query: 96  GHRDLILGFNTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSF 155
                  GFNTFLPKG+EITL  ED QPP KK VEFEEAI+FVNK KTRFQGDD VY SF
Sbjct: 54  -----TAGFNTFLPKGFEITLQPEDGQPPLKKRVEFEEAISFVNKTKTRFQGDDRVYISF 108

Query: 156 LDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILR 215
           LDIL+MYR ++KSITEVYQEV  LF+DH DLL EFTHFLPD+S  AS+H V   + S+L 
Sbjct: 109 LDILDMYRNDSKSITEVYQEVAILFRDHNDLLVEFTHFLPDTSATASVHSV---KTSVL- 164

Query: 216 DRSSAMPTARQVHVDKKERAMASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERR 275
           DR  ++P       DKK++++  H D D   +  D D +R L K +K+  R   KE E  
Sbjct: 165 DRGISLP-------DKKDQSITPHRDHDYGTEHTDLDRERPLKKENKEHMRGNTKENEH- 216

Query: 276 DDHRRERERDDRDFENDVNRDFSMQRFPHKRKSARKIEDSTAEPLHQGGEGDENFGMHPV 335
                   RD RDFE    +    ++F + ++      D +AE  +Q        G  P 
Sbjct: 217 --------RDARDFEPHSKK----EQFLNNKQKLHIRGDDSAEISNQNKFS----GAVPS 260

Query: 336 SSSYDDKNAMKSMFSQELSFCEKVKDKLR-DDYQEFLRCLHLYTKEIITRSELQSLVGDL 394
           SS+YD+K      +SQ+L+  ++VK+KL   +YQEFLRCL+L++KEII+R ELQSLVG+L
Sbjct: 261 SSTYDEKG-----YSQDLAIVDRVKEKLNASEYQEFLRCLNLFSKEIISRPELQSLVGNL 315

Query: 395 LGRYPDLMDGFNGFLARCEKSEELLADVMSK-------------------KSLWNEGRIP 435
           +G YPDLMD F  FL +CEK+  LL+ +++K                   +SLW+EG+ P
Sbjct: 316 IGVYPDLMDSFIEFLVQCEKT-GLLSGILTKNISISSAEKKTKSILNYTAESLWSEGKYP 374

Query: 436 KSVKVEDRDRDRDRERDDGVKDRDREAREKDRLDKSVAFVNKDVGPKMSMYSSKDKYLAK 495
           +     D DRD++++RDDG +DRD    +K+RL+K+ A +                  AK
Sbjct: 375 QPSL--DNDRDQEQKRDDGFRDRD---HDKERLEKAAANLK----------------WAK 413

Query: 496 PIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELG-AEVLNDHWVSVTSGSEDYSFKHM 554
           PI ELDLSNCE+CTPSYRLLPKNY I  ASQ+T     EV   H  +             
Sbjct: 414 PISELDLSNCEQCTPSYRLLPKNYPISIASQKTSPSHQEVKIIHLATCA----------- 462

Query: 555 RKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFTA 613
           R +  EESLF+CEDDRFELDMLLESV        +LL KIN+N +KT+ PI VEDH T 
Sbjct: 463 RTSMNEESLFKCEDDRFELDMLLESV--------KLLAKINSNELKTNSPIHVEDHLTG 513


>gi|5091536|gb|AAD39565.1|AC007067_5 T10O24.5 [Arabidopsis thaliana]
          Length = 1164

 Score =  464 bits (1195), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 303/733 (41%), Positives = 386/733 (52%), Gaps = 156/733 (21%)

Query: 349  FSQELSFCEKVKDKLRDD---YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGF 405
            F   + F  K+K +  DD   Y+ FL  L+LY KE  + SE+   V  L   + DL+  F
Sbjct: 166  FKDAIGFVTKIKTRFGDDEHAYKRFLDILNLYRKEKKSISEVYEEVTMLFKGHEDLLMEF 225

Query: 406  NGFLARCEKSEELLADVM------SKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKD-- 457
              FL  C +S     + +      +  ++ ++ +  +  K+ED     D +R+DG ++  
Sbjct: 226  VNFLPNCPESAPSTKNAVPRHKGTATTAMHSDKKRKQRCKLEDYSGHSD-QREDGDENLV 284

Query: 458  ------------------------------------RDREARE------KDRLDKSVAFV 475
                                                RD E RE       DR +KS A  
Sbjct: 285  TCSAGNSLEFSGLYPVLRSMLIFADSPVGEGQPGYFRDYENREDTETDTADRTEKSAASG 344

Query: 476  NKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVL 535
            ++D+G     + S  KY+  PI ELDLS C +CTPSYRLLPK+Y +   S R  LG + L
Sbjct: 345  SQDIGN----HKSTTKYVGTPINELDLSECTQCTPSYRLLPKDYAVEIPSYRNTLGKKTL 400

Query: 536  NDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKIN 595
            NDH VSVTSGSEDYSF HMRKNQYEESLFRCEDDR+E+DMLL SV+   K+VE LLEK+N
Sbjct: 401  NDHLVSVTSGSEDYSFSHMRKNQYEESLFRCEDDRYEMDMLLGSVSSAIKQVEILLEKMN 460

Query: 596  NNTIKTDGPIRVEDHFTALNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEE 655
            NNTI  D  I +E H +A+NLRCIERLYGD+GLDVMD+L+KN   ALPVILTRLKQKQEE
Sbjct: 461  NNTISVDSTICIEKHLSAMNLRCIERLYGDNGLDVMDLLKKNMHSALPVILTRLKQKQEE 520

Query: 656  WARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDD 715
            WARC SDF KVWAE+Y+KN+HKSLDHRSFYFKQQDSK+L  K L AE+K+ISEKK +ED 
Sbjct: 521  WARCHSDFQKVWAEVYAKNHHKSLDHRSFYFKQQDSKNLSTKCLVAEVKDISEKKHQED- 579

Query: 716  VLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLIKYSCGEMCTTEQLDKVMKIWTTFLEP 775
            +L AIA        P LEF Y D  IHEDLY LIKY C E+C TEQ DKVMK+W TFLEP
Sbjct: 580  LLQAIAVRVMPLFTPDLEFNYCDTQIHEDLYLLIKYYCEEICATEQSDKVMKLWITFLEP 639

Query: 776  MLGVPSRPQGAEDTEDVVKAKSHTVKSRAASVGDSDGSPDGDAAAMTSKHSNPSRNGDES 835
            + G+ SR Q     EDV K K++        + D+  +    A+    KH    +   + 
Sbjct: 640  IFGILSRSQDNLALEDVSKLKNNR------ELQDACLAVKETASGSNRKHPISPKRLSKD 693

Query: 836  IPPEQSSSSRAWLPNGDHGIKEDVSVEADHNARKSDNFCDSSEQDKVQNNAAMADETSGI 895
                Q SSSR           EDVS               +++ DK+Q++AAM       
Sbjct: 694  NTKMQGSSSR-----------EDVSANIK---------VKTAQPDKLQDDAAM------- 726

Query: 896  SKQASTNERLIGTNAAIAAAADQSNGRSNIENTSGLSVAHSRPGNHIVEGGLELRSSNEI 955
                 TNE +I ++  ++   DQ                    GNH+V            
Sbjct: 727  -----TNE-VIQSSKFVSPKNDQ---------------IMEDEGNHMV------------ 753

Query: 956  LPSSEGGECSRQNISTNGVMTEGAKILRYNAESVKQFKIEREEGELSPNGDFEEDNFAVY 1015
                                         NA SV+  K E EEGELSP    E+ NF V 
Sbjct: 754  -----------------------------NAASVE--KHELEEGELSPTASREQSNFEVN 782

Query: 1016 GESGLEAVHKAKD 1028
            G++  + + K  D
Sbjct: 783  GQNAFKPLQKVTD 795



 Score =  240 bits (612), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 125/234 (53%), Positives = 165/234 (70%), Gaps = 24/234 (10%)

Query: 1   MKRSRDEVYMNSQIKRPMISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQ 60
           MKR+R++V+ ++Q ++P +SSRGE +   + +              DAL YLKAVKDIF 
Sbjct: 52  MKRAREDVHTDTQKRKPEVSSRGETNKLPRTI--------------DALTYLKAVKDIFH 97

Query: 61  DKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLED 120
           D +EKY+ FLE+MK+FKAQ IDT GVI R+K LFKG+RDL+LGFNTFLPKGY+ITL  E+
Sbjct: 98  DNKEKYESFLELMKEFKAQTIDTNGVIERIKVLFKGYRDLLLGFNTFLPKGYKITLLPEE 157

Query: 121 EQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALF 180
           E+  PK  V+F++AI FV KIKTRF  D+H YK FLDILN+YRKE KSI+EVY+EV  LF
Sbjct: 158 EK--PKIRVDFKDAIGFVTKIKTRFGDDEHAYKRFLDILNLYRKEKKSISEVYEEVTMLF 215

Query: 181 QDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQVHVDKKER 234
           + H DLL EF +FLP+   +A     PS +N++ R + +A      +H DKK +
Sbjct: 216 KGHEDLLMEFVNFLPNCPESA-----PSTKNAVPRHKGTATTA---MHSDKKRK 261


>gi|302773990|ref|XP_002970412.1| hypothetical protein SELMODRAFT_60165 [Selaginella moellendorffii]
 gi|300161928|gb|EFJ28542.1| hypothetical protein SELMODRAFT_60165 [Selaginella moellendorffii]
          Length = 1070

 Score =  453 bits (1166), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 204/313 (65%), Positives = 259/313 (82%), Gaps = 3/313 (0%)

Query: 482 KMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS 541
           K S++++K+KY+ KPI ELDLS+CERCTPSYRLLPKNY    +S RTEL   VLND WVS
Sbjct: 379 KSSLHANKEKYMTKPISELDLSSCERCTPSYRLLPKNYPRLLSSHRTELAKSVLNDSWVS 438

Query: 542 VTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKT 601
           VTSGSEDYSFKHMR+NQYEESLFRCEDDRFELDMLLES   T K VEE++EK+ + ++++
Sbjct: 439 VTSGSEDYSFKHMRRNQYEESLFRCEDDRFELDMLLESTVATAKHVEEIVEKLQDASMES 498

Query: 602 DGPIRVEDHFTALNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRS 661
               R++DH + ++LRCIER+YGDHGLD++D++RK+ S+ LPV+ +RLKQKQEEW++CRS
Sbjct: 499 Q--TRIDDHLSVIDLRCIERIYGDHGLDIIDLMRKSPSVVLPVVHSRLKQKQEEWSKCRS 556

Query: 662 DFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIA 721
           D NKVWAE+YSKNYHKSLDHRSFYFKQQD KSL AKAL  EIK++  +KRKEDD ++A  
Sbjct: 557 DMNKVWAEVYSKNYHKSLDHRSFYFKQQDRKSLSAKALFGEIKDVHARKRKEDDSIIATL 616

Query: 722 AGNRRSIVPHLEFEYSDPDIHEDLYQLIKYSCGEMCTT-EQLDKVMKIWTTFLEPMLGVP 780
            GNRR + PHL+FEYSDP IH DL++++KYS  E+C++ EQ +K+M++WT+FLE M GVP
Sbjct: 617 TGNRRLLTPHLKFEYSDPSIHNDLFEIMKYSADEVCSSMEQSNKIMRVWTSFLESMFGVP 676

Query: 781 SRPQGAEDTEDVV 793
           SR +G ED E+  
Sbjct: 677 SRIRGTEDAEEAA 689



 Score = 46.6 bits (109), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 34/69 (49%)

Query: 41  QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDL 100
           Q +  N A+ ++  +K+ FQD  + Y  FLE++  F+        V   V  LF  H DL
Sbjct: 86  QPVEFNQAINFVNKIKNRFQDNEQVYKAFLEILNKFRKGSKSITEVYQEVASLFGHHPDL 145

Query: 101 ILGFNTFLP 109
           +  F  FLP
Sbjct: 146 LDEFTCFLP 154


>gi|302793452|ref|XP_002978491.1| hypothetical protein SELMODRAFT_108935 [Selaginella moellendorffii]
 gi|300153840|gb|EFJ20477.1| hypothetical protein SELMODRAFT_108935 [Selaginella moellendorffii]
          Length = 1234

 Score =  452 bits (1164), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 204/313 (65%), Positives = 259/313 (82%), Gaps = 3/313 (0%)

Query: 482 KMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS 541
           K S++++K+KY+ KPI ELDLS+CERCTPSYRLLPKNY    +S RTEL   VLND WVS
Sbjct: 379 KSSLHANKEKYMTKPISELDLSSCERCTPSYRLLPKNYPRLLSSHRTELAKSVLNDSWVS 438

Query: 542 VTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKT 601
           VTSGSEDYSFKHMR+NQYEESLFRCEDDRFELDMLLES   T K VEE++EK+ + ++++
Sbjct: 439 VTSGSEDYSFKHMRRNQYEESLFRCEDDRFELDMLLESTVATAKHVEEIVEKLQDASMES 498

Query: 602 DGPIRVEDHFTALNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRS 661
               R++DH + ++LRCIER+YGDHGLD++D++RK+ S+ LPV+ +RLKQKQEEW++CRS
Sbjct: 499 Q--TRIDDHLSVIDLRCIERIYGDHGLDIIDLMRKSPSVVLPVVHSRLKQKQEEWSKCRS 556

Query: 662 DFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIA 721
           D NKVWAE+YSKNYHKSLDHRSFYFKQQD KSL AKAL  EIK++  +KRKEDD ++A  
Sbjct: 557 DMNKVWAEVYSKNYHKSLDHRSFYFKQQDRKSLSAKALFGEIKDVHARKRKEDDSIIATL 616

Query: 722 AGNRRSIVPHLEFEYSDPDIHEDLYQLIKYSCGEMCTT-EQLDKVMKIWTTFLEPMLGVP 780
            GNRR + PHL+FEYSDP IH DL++++KYS  E+C++ EQ +K+M++WT+FLE M GVP
Sbjct: 617 TGNRRLLTPHLKFEYSDPSIHNDLFEIMKYSADEVCSSMEQSNKIMRVWTSFLESMFGVP 676

Query: 781 SRPQGAEDTEDVV 793
           SR +G ED E+  
Sbjct: 677 SRIRGTEDAEEAT 689



 Score = 46.2 bits (108), Expect = 0.089,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 34/69 (49%)

Query: 41  QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDL 100
           Q +  N A+ ++  +K+ FQD  + Y  FLE++  F+        V   V  LF  H DL
Sbjct: 86  QPVEFNQAINFVNKIKNRFQDNEQVYKAFLEILNKFRKGSKSITEVYQEVASLFGHHPDL 145

Query: 101 ILGFNTFLP 109
           +  F  FLP
Sbjct: 146 LDEFTCFLP 154


>gi|326531928|dbj|BAK01340.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 845

 Score =  449 bits (1154), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 242/443 (54%), Positives = 306/443 (69%), Gaps = 37/443 (8%)

Query: 579  SVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFTALNLRCIERLYGDHGLDVMDVLRKNA 638
            SVN  TKRVEEL+EK+ +N++K + PIR+++H T LNLRCIERLYGDHGLDVMDVLR+NA
Sbjct: 1    SVNAATKRVEELIEKMQDNSVKPESPIRIDEHLTPLNLRCIERLYGDHGLDVMDVLRRNA 60

Query: 639  SLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKA 698
            S+ALPVIL+RLKQKQ+EW+RCRSDFNKVWA+IY+KNYHKSLDHRSFYFKQQDSK+L  K+
Sbjct: 61   SVALPVILSRLKQKQDEWSRCRSDFNKVWADIYAKNYHKSLDHRSFYFKQQDSKNLSIKS 120

Query: 699  LSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLIKYSCGEMCT 758
            L  E+KEI+EKKRKEDDVL+AIAAGNRR IVP++ FEY D +IH+DLY+++KYSCGE+C 
Sbjct: 121  LLTEVKEINEKKRKEDDVLIAIAAGNRRPIVPNMSFEYVDANIHDDLYKIVKYSCGEVCG 180

Query: 759  TEQLDKVMKIWTTFLEPMLGVPSRPQGAEDTEDVVKAKSHTVKSRAASVGDSDGSPDGDA 818
            ++QLDKVM+IWTTFLEP+L VP R  G  D  D++K K+   KS  A+VG+S+ SPD  A
Sbjct: 181  SDQLDKVMRIWTTFLEPILRVPPRSHGTVDA-DIIKPKNGITKSGIANVGESNTSPDVVA 239

Query: 819  AAMTSKHSNPSRNGDESIPPEQSSSSRAWLPNGDHGIKEDV---SVEADHNARKSDNFCD 875
            A           +GDES+  EQ+ S+ A L     G+  D    S +AD  AR+ D    
Sbjct: 240  AQQG--------HGDESMQHEQAPSAVARLARSVKGVAADSQNGSRDADRTARRDDE--- 288

Query: 876  SSEQDKVQNNAAMADETSGISKQASTNERLIGTNAAIAAAADQSNGRSNIENTSGLSVAH 935
                    +NAA+ +E S +S Q    ER         +A   S+ + N E T G++ + 
Sbjct: 289  -------ASNAAL-NEVSAVSTQNMPTER---------SAGQHSHMKGNSETTPGVNASK 331

Query: 936  SRPGNHIVEGGLELRSSNEILPSSEGGECSRQNISTNGVMT-EGAKILRYN--AESVKQF 992
            S      + GG   R+ +E LPS+EGGE  +   S NG  T EG K   +N  A S    
Sbjct: 332  SSHAGVSIAGG--ARAGHEALPSTEGGEIGKSGSSLNGGATGEGNKGRLFNEPAASHNTS 389

Query: 993  KIEREEGELSPNGDFEEDNFAVY 1015
            K+EREEGELSPNGDFEEDNF  +
Sbjct: 390  KVEREEGELSPNGDFEEDNFVPF 412


>gi|168044186|ref|XP_001774563.1| putative histone deacetylase complex, SIN3 component
           [Physcomitrella patens subsp. patens]
 gi|162674118|gb|EDQ60631.1| putative histone deacetylase complex, SIN3 component
           [Physcomitrella patens subsp. patens]
          Length = 990

 Score =  419 bits (1077), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 228/528 (43%), Positives = 318/528 (60%), Gaps = 23/528 (4%)

Query: 340 DDKNAMKSMFSQELSFCEKVKDKLRDD---YQEFLRCLHLYTKEIITRSELQSLVGDLLG 396
           +DK      F Q +++  K+K + + D   Y+ FL  L++Y K   + +E+   V  L  
Sbjct: 80  EDKKQPAVEFDQAINYVNKIKARFQTDEHVYKTFLEILNMYRKGNKSINEVYQEVASLFE 139

Query: 397 RYPDLMDGFNGFLARCEKSEEL---LADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDD 453
            + DL++ F  FL    ++ E+    +  + + S  ++  +   + V+    D+      
Sbjct: 140 NHGDLLEEFTYFLPGQSQAGEVGEGFSGSVPQASTDDKKAVKGVIGVQYPFFDK------ 193

Query: 454 GVKDRDREAREKDRLDKSVAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYR 513
            VK R R         K +   ++++  +  + S    Y+ KPI ELDLSNC+RCTPSYR
Sbjct: 194 -VKARLRSRDTYQEFLKCLNIFSQEIISRDELQS---LYINKPISELDLSNCDRCTPSYR 249

Query: 514 LLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFEL 573
           LLPK+Y  P +S RT LG  VLND WVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFEL
Sbjct: 250 LLPKHYPRPVSSHRTALGNSVLNDSWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFEL 309

Query: 574 DMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFTALNLRCIERLYGDHGLDVMDV 633
           DMLLE   VT K V + + K      K +    V++  +A+NLRCIER+YGDHGLD+++ 
Sbjct: 310 DMLLEGTAVTAKLVGDYITKQEEQNGKAEALPPVDEFLSAINLRCIERIYGDHGLDMLEA 369

Query: 634 LRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKS 693
           +RKN S A+PVI +RL QK+EEW RCR + NKVW+E+Y+KN +K+LDHRSFYF+ QD K+
Sbjct: 370 VRKNTSRAMPVIHSRLVQKEEEWTRCREEMNKVWSEVYAKNCYKALDHRSFYFRSQDKKA 429

Query: 694 LGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLIKYSC 753
           L  K L AEIKE+SEK+R+EDD +LAI AGNRR ++P L +E+S+  IH+D+YQ+IKYS 
Sbjct: 430 LSTKGLLAEIKEVSEKRRREDDTMLAITAGNRRPLMPDLRYEFSELSIHDDMYQIIKYSS 489

Query: 754 GEMCTT-EQLDKVMKIWTTFLEPMLGVPSRPQGAEDTEDVVKAKSHTVKSRAASVGDS-- 810
            E+ ++ +  +K M++W  F+EP+LG+ SR QG ED   +    +        SVG S  
Sbjct: 490 EEISSSPDHTEKTMRMWRMFVEPVLGLSSRSQGVEDGRVMAFTTNAAASGGERSVGGSLV 549

Query: 811 --DGSPDGDAAAMTSKHSNPSRNGDESIPPEQSSSSRAWLPNGDHGIK 856
             +   + D           +  G E        S   WL  G +G K
Sbjct: 550 VENARAEADDRGCDEVREGMAVEGGEGTAARTEGS--GWLHGGSNGAK 595



 Score =  244 bits (623), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 120/163 (73%), Positives = 143/163 (87%), Gaps = 2/163 (1%)

Query: 41  QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDL 100
           Q+LTT+DALAYLKAVK+ F+D +EKYD+FLEVMKDFKAQR+DTAGVI RVK+LFKGHR L
Sbjct: 1   QRLTTDDALAYLKAVKEKFKDDKEKYDEFLEVMKDFKAQRVDTAGVITRVKDLFKGHRQL 60

Query: 101 ILGFNTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILN 160
           ILGFNTFLP+GYEITLPLE+++  P   VEF++AIN+VNKIK RFQ D+HVYK+FL+ILN
Sbjct: 61  ILGFNTFLPRGYEITLPLEEDKKQP--AVEFDQAINYVNKIKARFQTDEHVYKTFLEILN 118

Query: 161 MYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASI 203
           MYRK NKSI EVYQEV +LF++H DLLEEFT+FLP  S A  +
Sbjct: 119 MYRKGNKSINEVYQEVASLFENHGDLLEEFTYFLPGQSQAGEV 161



 Score = 66.2 bits (160), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/71 (47%), Positives = 47/71 (66%), Gaps = 2/71 (2%)

Query: 322 QGGEGDENFGMHPVSSSYDDKNAMKSMFSQELSFCEKVKDKL--RDDYQEFLRCLHLYTK 379
           Q GE  E F      +S DDK A+K +   +  F +KVK +L  RD YQEFL+CL+++++
Sbjct: 157 QAGEVGEGFSGSVPQASTDDKKAVKGVIGVQYPFFDKVKARLRSRDTYQEFLKCLNIFSQ 216

Query: 380 EIITRSELQSL 390
           EII+R ELQSL
Sbjct: 217 EIISRDELQSL 227


>gi|5080821|gb|AAD39330.1|AC007258_19 Hypothetical protein [Arabidopsis thaliana]
          Length = 1108

 Score =  402 bits (1033), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 253/606 (41%), Positives = 318/606 (52%), Gaps = 165/606 (27%)

Query: 426  KSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRLDKSVAFVNKDVGPKMSM 485
            KSL N+G+ P   KVED +  +  E + G         E+D           D+G + ++
Sbjct: 262  KSLANQGQWPGYPKVEDTEGIQIYESNGG--------HERD----------PDIGSQKNL 303

Query: 486  YSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSG 545
             S+   ++AK I ELDL++C +CTPSYR LP +Y I   S R  LG +VLNDHWVSVTSG
Sbjct: 304  LSTN--HMAKAINELDLTDCAQCTPSYRRLPDDYPIQIPSYRNSLGEKVLNDHWVSVTSG 361

Query: 546  SEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPI 605
            SEDYSFKHMRKNQYEESLFRCEDDR                                   
Sbjct: 362  SEDYSFKHMRKNQYEESLFRCEDDR----------------------------------- 386

Query: 606  RVEDHFTALNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNK 665
                        CIERLYGD+GLDVMD L+KN+ +ALPVILTRLKQKQEEWARCR+DF K
Sbjct: 387  ------------CIERLYGDYGLDVMDFLKKNSHIALPVILTRLKQKQEEWARCRADFRK 434

Query: 666  VWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNR 725
            VWAE+Y+KN+HKSLDHRSFYFKQQDSK+L  K L AEIK+ISE+K KED +L AIA G +
Sbjct: 435  VWAEVYAKNHHKSLDHRSFYFKQQDSKNLSTKGLVAEIKDISERKHKED-LLRAIAVGTK 493

Query: 726  RSIVPHLEFEYSDPDIHEDLYQLIKYSCGEMCTTEQLDKVMKIWTTFLEPMLGVPSRPQG 785
             S  P +EF Y+D  +H DLY+LIKY C E+C TEQ DKVMK+W TFLEPM GVPSR + 
Sbjct: 494  PSFTPDVEFIYTDTKVHTDLYKLIKYYCEEICATEQSDKVMKLWVTFLEPMFGVPSRSET 553

Query: 786  AEDTEDVVKA---KSHTVKSRAASVGDSDGSPDGDAAAMTSKHSNPSRNGDESIPPEQSS 842
             E  +DV K    + H   S A      DGS   +   +T              PP+   
Sbjct: 554  IETMKDVAKIEDNQEHHDASEAVKENTCDGSMASNLKPLT--------------PPK--- 596

Query: 843  SSRAWLPNGDHGIKEDVSVEADHNARKSDNFCDSSEQDKVQNNAAMADETSGISKQASTN 902
                 +PN ++ + +  S   D       N  +S +QDK+ + AA       I+ + S  
Sbjct: 597  -----MPNKENPMIQGSSFAQDLPV----NTGESIQQDKLHDVAA-------ITNEDSQP 640

Query: 903  ERLIGTNAAIAAAADQSNGRSNIENTSGLSVAHSRPGNHIVEGGLELRSSNEILPSSEGG 962
             +L+ T                               N ++  G+E RS           
Sbjct: 641  SKLVSTR------------------------------NDLIMEGVENRS----------- 659

Query: 963  ECSRQNISTNGVMTEGAKILRYNAESVKQFKIEREEGELSPNGDFEEDNFAVYGESGLEA 1022
                                R +  S+   K+EREEGELSP    E++NF VY E+GLE 
Sbjct: 660  --------------------RVSDVSMGGHKVEREEGELSPTESCEQENFEVYKENGLEP 699

Query: 1023 VHKAKD 1028
            V K  D
Sbjct: 700  VQKLPD 705



 Score =  279 bits (713), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 152/256 (59%), Positives = 181/256 (70%), Gaps = 4/256 (1%)

Query: 1   MKRSRDEVYMNSQIKRPMISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQ 60
           MKR R+EVY+  Q++ P +SSRGE +G+   + GGG  G       DAL YLKAVKD+FQ
Sbjct: 1   MKRVREEVYVEPQMRGPTVSSRGETNGRPSTISGGGTTGGLTTV--DALTYLKAVKDMFQ 58

Query: 61  DKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLED 120
           D +EKY+ FL VMKDFKAQR+DT GVIARVK+LFKG+ DL+LGFNTFLPKGY+ITL  ED
Sbjct: 59  DNKEKYETFLGVMKDFKAQRVDTNGVIARVKDLFKGYDDLLLGFNTFLPKGYKITLQPED 118

Query: 121 EQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALF 180
           E+P  KKPV+F+ AI FVN+IK RF GDD  YK FLDILNMYRKE KSI EVYQEV  LF
Sbjct: 119 EKP--KKPVDFQVAIEFVNRIKARFGGDDRAYKKFLDILNMYRKETKSINEVYQEVTLLF 176

Query: 181 QDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQVHVDKKERAMASHA 240
           QDH DLL EF HFLPD  G+ S++     RN+I RDR+S  P     H +KK +      
Sbjct: 177 QDHEDLLGEFVHFLPDFRGSVSVNDPLFQRNTIPRDRNSTFPGMHPKHFEKKIKRSRHDE 236

Query: 241 DRDLSVDRPDPDHDRV 256
             +LS  R D D + V
Sbjct: 237 YTELSDQREDGDENLV 252


>gi|303273270|ref|XP_003055996.1| hypothetical protein MICPUCDRAFT_70276 [Micromonas pusilla
           CCMP1545]
 gi|226462080|gb|EEH59372.1| hypothetical protein MICPUCDRAFT_70276 [Micromonas pusilla
           CCMP1545]
          Length = 1209

 Score =  380 bits (976), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 202/467 (43%), Positives = 286/467 (61%), Gaps = 65/467 (13%)

Query: 324 GEGDENFGMHPVSSSYDDKNAMKSMFSQELSFCEKVKDKLR--DDYQEFLRCLHLYTKEI 381
           GE +EN    P  S  D  N   S+ ++EL+F EKVK +LR  + Y E ++CL+++  E+
Sbjct: 235 GEQNENSFDAPFGSGIDRYNTAASL-AKELAFFEKVKTRLRSRESYGELIKCLNIFNSEV 293

Query: 382 ITRSELQSLVGDLLGRYPDLMDGFNGFLARCEKSEELLADVMSKKSLWNEGRIPKSVKVE 441
           I++ EL++LV D+LG YPDL  GFN FL RCE ++  L++ +  K    +G++  S    
Sbjct: 294 ISKMELEALVWDILGSYPDLHSGFNDFLTRCESTDFDLSESVRGK----DGKLGNS---- 345

Query: 442 DRDRDRDRERDDGVKDRDREAREKDRLDKSVAFVNKDVGPKMSMYSSKDKYLAKPIQELD 501
                         KD  +                          S+++K+L +PI ELD
Sbjct: 346 --------------KDTQK-------------------------ISAREKFLLRPISELD 366

Query: 502 LSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEE 561
           LS CERC PSYRLLPKN+   SAS R+ L  E LND+WVSVTSGSEDYSFK MRKNQYEE
Sbjct: 367 LSACERCGPSYRLLPKNFPKASASARSPLCQEHLNDNWVSVTSGSEDYSFKAMRKNQYEE 426

Query: 562 SLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF-TALNLRCIE 620
           +LFRCEDDRFELDM+LE+  VT   ++ + EKIN  T +     R+ + F T ++LR IE
Sbjct: 427 ALFRCEDDRFELDMVLETTEVTVDALQAIFEKINRMTAEEASHYRIPEGFLTPIHLRTIE 486

Query: 621 RLYG---DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHK 677
           R+YG   DHG D+  ++     + +P++L+RLKQK  EW + + +   +W ++Y KNY+K
Sbjct: 487 RVYGIGTDHGQDIRRMILDYPVVTIPMVLSRLKQKDLEWRKVKEEVTPIWVDVYEKNYNK 546

Query: 678 SLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRR-----SIVPHL 732
           SLDHRSFYFKQ D K+L  K ++ EIKE+S+K++  DD       GN R     ++ P L
Sbjct: 547 SLDHRSFYFKQTDKKALSVKGMTNEIKEVSDKRKNSDD------HGNIRELRGHALSPDL 600

Query: 733 EFEYSDPDIHEDLYQLIKYSCGEMCTTEQLDKVMKIWTTFLEPMLGV 779
            F Y+D  +H+D+Y ++K+S  EM +TE  D++MK+W  F+EP  G+
Sbjct: 601 TFHYADRKVHDDIYAVLKFSTNEMMSTEHADRIMKMWRDFIEPFFGI 647



 Score =  186 bits (471), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 98/191 (51%), Positives = 122/191 (63%), Gaps = 31/191 (16%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
           L   DAL YL+ +K+  +D+++ YD+FLE+MK+FK+QRIDT GVI RVK +FKGHRDLIL
Sbjct: 19  LRKQDALTYLRELKERLKDRKDTYDEFLEIMKEFKSQRIDTEGVIKRVKTIFKGHRDLIL 78

Query: 103 GFNTFLPKGYEITLP--------------LEDE-----------------QPPPKKPVEF 131
           GFN FLPK  EI  P              +ED                      +  VEF
Sbjct: 79  GFNQFLPKVREIYCPENSIYAFSEGHEIRIEDVEREEREEVERVKAETNGTQSARPQVEF 138

Query: 132 EEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFT 191
             AI++VNKIKTRF  D+ VYK+FL+ILNMYRK  KSI++VY EV ALF+ H DLLEEFT
Sbjct: 139 VHAISYVNKIKTRFANDERVYKAFLEILNMYRKNLKSISQVYDEVAALFKSHTDLLEEFT 198

Query: 192 HFLPDSSGAAS 202
           +FLPD    A+
Sbjct: 199 YFLPDVDNPAA 209


>gi|297840567|ref|XP_002888165.1| hypothetical protein ARALYDRAFT_893562 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297334006|gb|EFH64424.1| hypothetical protein ARALYDRAFT_893562 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1152

 Score =  373 bits (958), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 243/618 (39%), Positives = 321/618 (51%), Gaps = 110/618 (17%)

Query: 349 FSQELSFCEKVKDKLRDD---YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGF 405
           F   + F  K+K +   D   Y++FL  L++Y K+  + +E+   V  L   + DL+  F
Sbjct: 127 FQVAIEFVNKIKARFGGDERAYKKFLDILNMYRKQTKSINEVYQEVTLLFQDHEDLLGEF 186

Query: 406 NGFLARCEKSEELLADVMSKKSLWNEGRIPKSV--------KVEDRDRDRDRERDDGVKD 457
             FL     S  +   +  + ++ ++   P           K++    D   E  D  +D
Sbjct: 187 FHFLPDFRGSVSVNNPLFRRNTVPHDRNSPFHAMHPKHYEKKIKRSKHDEYTELSDQRED 246

Query: 458 RDREA---REKDRLDKSVAFVNKDVG-PKMSMYSSKDKY--------------LAKPIQE 499
            D         + L KS+A   +  G PK+        Y              +AK I E
Sbjct: 247 GDENLVAYSAGNSLGKSLANHGQWPGYPKVEDTEGIQNYENNGDSKNLLSTNHMAKAINE 306

Query: 500 LDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQY 559
           LDL+ C +CTPSYR LP +Y I   S R  LG +VLNDHWVSVTSGSEDYSFKHMRKNQY
Sbjct: 307 LDLAGCAQCTPSYRRLPDDYPIHIPSYRNSLGEKVLNDHWVSVTSGSEDYSFKHMRKNQY 366

Query: 560 EESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFTALNLRCI 619
           EESLFRCEDDR                                               CI
Sbjct: 367 EESLFRCEDDR-----------------------------------------------CI 379

Query: 620 ERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSL 679
           ERLYGD+GLDV+D L+K++  ALPVILTRLKQKQ+EWARCRSDF KVWAE+Y+KN+ KSL
Sbjct: 380 ERLYGDYGLDVVDFLKKSSHTALPVILTRLKQKQKEWARCRSDFRKVWAEVYAKNHQKSL 439

Query: 680 DHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDP 739
           DHRSFYFKQQDSK+L  K L AEIK+ISE+K KE D++ A+A GN+ +  P +EF Y+D 
Sbjct: 440 DHRSFYFKQQDSKNLSTKGLVAEIKDISERKHKE-DLIRAVAVGNKPAFTPDMEFSYTDT 498

Query: 740 DIHEDLYQLIKYSCGEMCTTEQLDKVMKIWTTFLEPMLGVPSRPQGAEDTEDVVKA---K 796
            +H DLYQLIKY C E+  TEQ DKVM++W TFLEPMLGVPSR Q  E  +DV      +
Sbjct: 499 QVHTDLYQLIKYYCEEIYATEQADKVMELWVTFLEPMLGVPSRSQTNETMKDVANIEDNQ 558

Query: 797 SHTVKSRAASVGDSDGSPDGDAAAMTSKHSNPSRNGDESIPPEQSSSSRAWLPNGDHGIK 856
           +H     A      DGS      A+  K   P ++ ++  P  Q SS             
Sbjct: 559 AHHDACEAVKENTCDGS-----LALNLKPLTPPKSPNKENPILQGSS-----------FP 602

Query: 857 EDVSVEADHNARKSDNFCDSSEQDKVQNNAAMADET---SGISKQAST-NERLIGTNAAI 912
           +D+ +          N  +S +QDK+ + A + +E    S  SK  S  N+ ++      
Sbjct: 603 QDIPL----------NTLESIQQDKLHDGATITNEVLQDSQPSKLVSPRNDMIMKGVENC 652

Query: 913 AAAADQSNGRSNIENTSG 930
           +  +D S G   +E   G
Sbjct: 653 SKVSDVSMGEHKVEREEG 670



 Score =  268 bits (686), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 149/256 (58%), Positives = 181/256 (70%), Gaps = 4/256 (1%)

Query: 1   MKRSRDEVYMNSQIKRPMISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQ 60
           MKR RDEVY++ QI+ P +SSRGE +G+   +  GGGG    LTT+ AL YLKAVKD+F 
Sbjct: 1   MKRVRDEVYVDGQIRGPTVSSRGETNGRP--LTIGGGGTTGALTTDAALTYLKAVKDMFH 58

Query: 61  DKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLED 120
           D +EKY+ FL VMKDFKAQR+DT GVI R+K+LFKG+ DL+LGFNTFLPKGY+ITL  ED
Sbjct: 59  DNKEKYETFLGVMKDFKAQRVDTNGVITRIKDLFKGYDDLLLGFNTFLPKGYKITLQPED 118

Query: 121 EQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALF 180
           E+P  KKPV+F+ AI FVNKIK RF GD+  YK FLDILNMYRK+ KSI EVYQEV  LF
Sbjct: 119 EKP--KKPVDFQVAIEFVNKIKARFGGDERAYKKFLDILNMYRKQTKSINEVYQEVTLLF 176

Query: 181 QDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQVHVDKKERAMASHA 240
           QDH DLL EF HFLPD  G+ S++     RN++  DR+S        H +KK +      
Sbjct: 177 QDHEDLLGEFFHFLPDFRGSVSVNNPLFRRNTVPHDRNSPFHAMHPKHYEKKIKRSKHDE 236

Query: 241 DRDLSVDRPDPDHDRV 256
             +LS  R D D + V
Sbjct: 237 YTELSDQREDGDENLV 252



 Score = 47.0 bits (110), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 23/41 (56%), Positives = 28/41 (68%)

Query: 988  SVKQFKIEREEGELSPNGDFEEDNFAVYGESGLEAVHKAKD 1028
            S+ + K+EREEGELSP   FE +N  VY E+GLE V K  D
Sbjct: 659  SMGEHKVEREEGELSPTEIFEHENIEVYKENGLEPVQKLPD 699


>gi|115461547|ref|NP_001054373.1| Os05g0100500 [Oryza sativa Japonica Group]
 gi|113577924|dbj|BAF16287.1| Os05g0100500, partial [Oryza sativa Japonica Group]
          Length = 368

 Score =  361 bits (926), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 204/356 (57%), Positives = 245/356 (68%), Gaps = 26/356 (7%)

Query: 34  GGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKEL 93
           G G    QKLTTNDAL YLKAVKD FQDKR+KYD+FLEVM+DFK+ RIDTAGVI RVK L
Sbjct: 37  GQGPSQNQKLTTNDALLYLKAVKDKFQDKRDKYDEFLEVMRDFKSGRIDTAGVIIRVKTL 96

Query: 94  FKGHRDLILGFNTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYK 153
           F GH +LILGFN FLPKG+ I L     Q   KKPV+F EAINFVNKIK RFQ +DHVYK
Sbjct: 97  FNGHHELILGFNAFLPKGFAIKL-----QDLEKKPVDFMEAINFVNKIKARFQQEDHVYK 151

Query: 154 SFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSI 213
           SFL ILNMYR  NKSI +VY EV ALF+D+PDLLEEF HFLPD+S A     VP G +S 
Sbjct: 152 SFLGILNMYRLHNKSIQDVYGEVAALFRDYPDLLEEFKHFLPDTSTAPEPVTVPRGVSSR 211

Query: 214 LRDRSSAMPTARQVHVDKKERAMASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERE 273
             DR   MP+AR   + K+ERA  S  DRD S+DRPDP+        D   RRR +K R+
Sbjct: 212 HDDRGPLMPSARNAQIIKRERAYPSTVDRDFSIDRPDPE--------DDPHRRRVDKGRD 263

Query: 274 -RRDDHRRERERDDRDFENDVNRDFSMQRFPHKRKSARKIEDSTAEPLHQGGEGDENFGM 332
            + D  R++ E D +D E D       QR   KRK ARK++ + A+   QG       G+
Sbjct: 264 GKVDRSRKDYETDVKDVEYDSKDLDGGQR---KRKLARKMDGALAD-TQQG-------GV 312

Query: 333 HPVSSSYDDKNAMKSMFSQELSFCEKVKDKLRDD-YQEFLRCLHLYTKEIITRSEL 387
              +S YDDK+A+KS +++E  FCEKVK+KL  + YQEFL+CLH+Y++EIITRSEL
Sbjct: 313 STSTSPYDDKDALKSAYTKEFRFCEKVKEKLEPEAYQEFLKCLHIYSQEIITRSEL 368


>gi|255070093|ref|XP_002507128.1| SIN3 component of histone deacetylase complex [Micromonas sp.
           RCC299]
 gi|226522403|gb|ACO68386.1| SIN3 component of histone deacetylase complex [Micromonas sp.
           RCC299]
          Length = 1215

 Score =  358 bits (919), Expect = 9e-96,   Method: Compositional matrix adjust.
 Identities = 194/450 (43%), Positives = 274/450 (60%), Gaps = 62/450 (13%)

Query: 349 FSQELSFCEKVKDKLRD--DYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFN 406
            ++ELSF E+VK +LR+   Y E ++CL+++  E+I++ ELQSLV D+LGR+PDL  GF+
Sbjct: 247 LAKELSFFERVKARLRNRESYNELIKCLNIFNSEVISKMELQSLVWDILGRHPDLYSGFS 306

Query: 407 GFLARCEKSE-ELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREK 465
            FLARCE  + ELL     K     +G++                    VK+        
Sbjct: 307 EFLARCESMDFELLESGKGK-----DGKL-------------------SVKELQ------ 336

Query: 466 DRLDKSVAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSAS 525
                           K+ + S+++K+L++PI ELDLS CERC PSYRLLPK+Y    AS
Sbjct: 337 ----------------KLKIISAREKFLSRPISELDLSACERCGPSYRLLPKDYPKAPAS 380

Query: 526 QRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTK 585
            RT L  E LND+WVSVTSGSEDYSFK MRKNQYEE+LFRCEDDRFELDM+LE+  VT  
Sbjct: 381 ARTSLCQEHLNDNWVSVTSGSEDYSFKAMRKNQYEEALFRCEDDRFELDMVLETTAVTIC 440

Query: 586 RVEELLEKINNNTIKTDGPIRV-EDHFTALNLRCIERLYG---DHGLDVMDVLRKNASLA 641
            ++ +++K+N          R+ E   + ++LR IERLYG   D G D+  ++    S  
Sbjct: 441 ALQPIIDKLNAMPSDEASQFRIPEGTLSPIHLRTIERLYGIGTDRGSDIRRMILDYPSAT 500

Query: 642 LPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSA 701
             V++ RLKQK  EW + +++   VW ++Y KNY+KSLDHRSFYFKQ D K+L AK ++ 
Sbjct: 501 AHVVMARLKQKDAEWKQIKTELTPVWVDVYEKNYNKSLDHRSFYFKQTDKKALSAKGMTG 560

Query: 702 EIKEISEKKRKEDDVL-----LAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLIKYSCGEM 756
           EIKE+ EKK+  +D++     +  AA N   I P L F Y+D  +H+D+Y ++K+   EM
Sbjct: 561 EIKEVWEKKKHSEDIISRSNDVTSAACN---ISPDLTFTYADRTVHDDIYAVLKFCTHEM 617

Query: 757 CTTEQLDKVMKIWTTFLEPMLGVPSR-PQG 785
             ++  ++VM  W  F+EP  G+  + P+G
Sbjct: 618 MNSDHAERVMNTWRIFMEPFFGITRKDPEG 647



 Score =  199 bits (505), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 107/202 (52%), Positives = 137/202 (67%), Gaps = 23/202 (11%)

Query: 39  GAQKLTTNDAL------AYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKE 92
             QK +T+DAL       YL+ +K+  +DK++ YD+FLE+MK+FKAQRIDT GVI RVK 
Sbjct: 8   AGQKASTDDALRKQEALTYLRELKERLKDKKDTYDEFLEIMKEFKAQRIDTEGVIKRVKT 67

Query: 93  LFKGHRDLILGFNTFLPKGYEITLPLEDEQ---------------PPPKKPVEFEEAINF 137
           +FKGHRDLILGFN FLPKG+EI +   D +               PP K  VEF  AI++
Sbjct: 68  IFKGHRDLILGFNQFLPKGHEIRVEDVDREEREEAERAKAAAGSVPPVKPQVEFVHAISY 127

Query: 138 VNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLPDS 197
           VNKIKTRF  D+ VYK+FL+ILNMYRK  K+I +VY EV +LF+ H DLLEEFT+FLPD 
Sbjct: 128 VNKIKTRFANDERVYKAFLEILNMYRKNLKTIGQVYDEVASLFKSHNDLLEEFTYFLPDF 187

Query: 198 SGAASIHYVPSGRNSILRDRSS 219
           S  A+     +G+   LR +S+
Sbjct: 188 STPAAGKKAATGKT--LRGKSA 207


>gi|255070095|ref|XP_002507129.1| histone deacetylase complex protein [Micromonas sp. RCC299]
 gi|226522404|gb|ACO68387.1| histone deacetylase complex protein [Micromonas sp. RCC299]
          Length = 1124

 Score =  357 bits (917), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 191/449 (42%), Positives = 272/449 (60%), Gaps = 60/449 (13%)

Query: 349 FSQELSFCEKVKDKLRD--DYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFN 406
            ++ELSF E+VK +LR+   Y E ++CL+++  E+I++ ELQSLV D+LGR+PDL  GF+
Sbjct: 156 LAKELSFFERVKARLRNRESYNELIKCLNIFNSEVISKMELQSLVWDILGRHPDLYSGFS 215

Query: 407 GFLARCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKD 466
            FLARCE                       S+  E  +  + ++    VK+         
Sbjct: 216 EFLARCE-----------------------SMDFELLESGKGKDGKLSVKELQ------- 245

Query: 467 RLDKSVAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQ 526
                          K+ + S+++K+L++PI ELDLS CERC PSYRLLPK+Y    AS 
Sbjct: 246 ---------------KLKIISAREKFLSRPISELDLSACERCGPSYRLLPKDYPKAPASA 290

Query: 527 RTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKR 586
           RT L  E LND+WVSVTSGSEDYSFK MRKNQYEE+LFRCEDDRFELDM+LE+  VT   
Sbjct: 291 RTSLCQEHLNDNWVSVTSGSEDYSFKAMRKNQYEEALFRCEDDRFELDMVLETTAVTICA 350

Query: 587 VEELLEKINNNTIKTDGPIRV-EDHFTALNLRCIERLYG---DHGLDVMDVLRKNASLAL 642
           ++ +++K+N          R+ E   + ++LR IERLYG   D G D+  ++    S   
Sbjct: 351 LQPIIDKLNAMPSDEASQFRIPEGTLSPIHLRTIERLYGIGTDRGSDIRRMILDYPSATA 410

Query: 643 PVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAE 702
            V++ RLKQK  EW + +++   VW ++Y KNY+KSLDHRSFYFKQ D K+L AK ++ E
Sbjct: 411 HVVMARLKQKDAEWKQIKTELTPVWVDVYEKNYNKSLDHRSFYFKQTDKKALSAKGMTGE 470

Query: 703 IKEISEKKRKEDDVL-----LAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLIKYSCGEMC 757
           IKE+ EKK+  +D++     +  AA N   I P L F Y+D  +H+D+Y ++K+   EM 
Sbjct: 471 IKEVWEKKKHSEDIISRSNDVTSAACN---ISPDLTFTYADRTVHDDIYAVLKFCTHEMM 527

Query: 758 TTEQLDKVMKIWTTFLEPMLGVPSR-PQG 785
            ++  ++VM  W  F+EP  G+  + P+G
Sbjct: 528 NSDHAERVMNTWRIFMEPFFGITRKDPEG 556



 Score =  173 bits (438), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 89/148 (60%), Positives = 107/148 (72%), Gaps = 3/148 (2%)

Query: 73  MKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLEDEQPPPKKP-VEF 131
           MK+FKAQRIDT GVI RVK +FKGHRDLILGFN FLPK       L +   PP KP VEF
Sbjct: 1   MKEFKAQRIDTEGVIKRVKTIFKGHRDLILGFNQFLPKVDTCAFFLSESAVPPVKPQVEF 60

Query: 132 EEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFT 191
             AI++VNKIKTRF  D+ VYK+FL+ILNMYRK  K+I +VY EV +LF+ H DLLEEFT
Sbjct: 61  VHAISYVNKIKTRFANDERVYKAFLEILNMYRKNLKTIGQVYDEVASLFKSHNDLLEEFT 120

Query: 192 HFLPDSSGAASIHYVPSGRNSILRDRSS 219
           +FLPD S  A+     +G+   LR +S+
Sbjct: 121 YFLPDFSTPAAGKKAATGKT--LRGKSA 146



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 40/160 (25%), Positives = 68/160 (42%), Gaps = 17/160 (10%)

Query: 48  ALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTF 107
           A++Y+  +K  F +    Y  FLE++  ++        V   V  LFK H DL+  F  F
Sbjct: 63  AISYVNKIKTRFANDERVYKAFLEILNMYRKNLKTIGQVYDEVASLFKSHNDLLEEFTYF 122

Query: 108 LPKGYEITLPLEDEQPPPKKPVEFEEA-------------INFVNKIKTRFQGDDHVYKS 154
           LP   + + P   ++    K +  + A             ++F  ++K R +  +  Y  
Sbjct: 123 LP---DFSTPAAGKKAATGKTLRGKSAFTSGQHSASLAKELSFFERVKARLRNRES-YNE 178

Query: 155 FLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFL 194
            +  LN++  E  S  E+   V  +   HPDL   F+ FL
Sbjct: 179 LIKCLNIFNSEVISKMELQSLVWDILGRHPDLYSGFSEFL 218


>gi|194689822|gb|ACF78995.1| unknown [Zea mays]
 gi|413947141|gb|AFW79790.1| hypothetical protein ZEAMMB73_045892 [Zea mays]
          Length = 572

 Score =  342 bits (877), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 209/380 (55%), Positives = 251/380 (66%), Gaps = 52/380 (13%)

Query: 1   MKR-SRDEVYMNSQIKRPMISSRGEPSGQTQ---VVG----------------------G 34
           MKR +RD+  M SQ+KRP +  R +PS Q Q   V G                       
Sbjct: 1   MKRGARDDALMGSQLKRPNVG-RSDPSAQPQHMPVPGLASAAAPPPQAGAAPPAQPQQTS 59

Query: 35  GGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELF 94
           G     QKLTTNDAL YLKAVKD FQDKREKY++FLEVM+DFK++RIDT GVI RVK LF
Sbjct: 60  GAALTNQKLTTNDALVYLKAVKDKFQDKREKYEEFLEVMRDFKSERIDTNGVIGRVKTLF 119

Query: 95  KGHRDLILGFNTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKS 154
            G+ +LILGFN FLPKGY I L  E      KKPV+F EAINFVNKIK RFQ D+ VYK+
Sbjct: 120 NGYPELILGFNAFLPKGYAIKLQEE------KKPVDFVEAINFVNKIKNRFQHDERVYKA 173

Query: 155 FLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSIL 214
           FLDILNMYRK+NKSI +VY EV  LF+DH DLLEEF HFLPD+S A     V S R  ++
Sbjct: 174 FLDILNMYRKDNKSIQDVYHEVAGLFKDHKDLLEEFQHFLPDTSVAPQA--VASSRGGLV 231

Query: 215 R--DRSSAMPTARQVHVDKKERAMASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKER 272
           +  DRSS  P  R +H +K+ERA  SHADRD SVDRPD DHDR        QRRR +KE+
Sbjct: 232 KREDRSSLPPANRTLHNEKRERACLSHADRDFSVDRPDVDHDR--------QRRRLDKEK 283

Query: 273 ERRDDH-RRERERDDRDFENDVNRDFSMQRFPHKRKS-ARKIEDSTAEPLHQGGEGDENF 330
           ER+ +  RR+ ER+D+D E+D +RD  + +   KRK   RK+ED+     HQGG   EN 
Sbjct: 284 ERKVERDRRDYEREDKDGEHD-SRDLEIGQ--RKRKPFPRKMEDNAGAETHQGGPS-ENH 339

Query: 331 GMHPV-SSSYDDKNAMKSMF 349
           G+H V SSSYDDK+A+K+  
Sbjct: 340 GIHSVSSSSYDDKDALKNFL 359


>gi|384250292|gb|EIE23772.1| hypothetical protein COCSUDRAFT_29004 [Coccomyxa subellipsoidea
           C-169]
          Length = 1035

 Score =  339 bits (870), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 194/471 (41%), Positives = 273/471 (57%), Gaps = 60/471 (12%)

Query: 340 DDKNAMKSMFSQELSFCEKVKDKLRD--DYQEFLRCLHLYTKEIITRSELQSLVGDLLGR 397
           D +  ++S  ++ELSF EKVK +LR+   YQ+FL+CL+L+ +EI+ + ELQ +V D+LGR
Sbjct: 208 DRRGTVRSNLAKELSFFEKVKTRLRNREQYQDFLKCLNLFAQEIVAKPELQIMVQDILGR 267

Query: 398 YPDLMDGFNGFLARCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKD 457
           YPDL+  FN FL RCE     + D      + ++GR+          RD  R +   ++ 
Sbjct: 268 YPDLLMSFNDFLHRCE-----MLDFDFDPKMVSQGRM--------HTRDIARLKVCPIRH 314

Query: 458 RDREAREKDRLDKSVAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPK 517
                                  P +            PI ELD+S  ERCT SY  LP 
Sbjct: 315 H----------------------PSL------------PISELDVSGWERCTTSYVRLPP 340

Query: 518 NYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLL 577
           +Y     S RT L   ++ND WVSVTSGSEDYSFKHMRKNQYEE+LFRCEDDRFELDM++
Sbjct: 341 DYPKLQCSHRTPLALSLVNDIWVSVTSGSEDYSFKHMRKNQYEEALFRCEDDRFELDMVI 400

Query: 578 ES----VNVTTKRVEELLEKINNNTIKTDGPIRVEDHFTALNLRCIERLYGDHGLDVMDV 633
           ES    V   T  V++L E   +       P    +  T ++ R I+++YG+ G  V+D+
Sbjct: 401 ESNASAVRAITPLVQQLSELPPDEKATWRPP---PNSLTPIHYRAIQKIYGEQGPTVVDL 457

Query: 634 LRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKS 693
           +RKN ++AL V+L RL QK EEW + ++   K+W ++Y  NYHKSLDHRSFYFKQ D K 
Sbjct: 458 VRKNPAVALGVVLPRLLQKDEEWRKTKATMAKLWQKVYEANYHKSLDHRSFYFKQTDKKY 517

Query: 694 LGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRS--IVPHLEFEYSDPDIHEDLYQLIKY 751
           LGAKA+  EIK+I E++R  D  L A+++    +  + P L + Y D  +HED Y++IKY
Sbjct: 518 LGAKAMVQEIKDIVERRRAADSSLSAVSSSAPFASRLTPDLTYNYKDRKVHEDAYKIIKY 577

Query: 752 SCGEMCTTEQLDKVMKIWTTFLEPMLGVPSRPQGAEDTEDVVKAKSHTVKS 802
           +  E+ + E  ++    WTTF+E   G+PSR   A++   V+  +S    S
Sbjct: 578 ALDEILSVELAERAFDFWTTFVEAFFGLPSR--SAQEGNAVIAGRSQQADS 626



 Score =  221 bits (563), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 112/185 (60%), Positives = 137/185 (74%), Gaps = 6/185 (3%)

Query: 35  GGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELF 94
           G    + KLTTNDAL+YL+ VK  FQD +E YD+FLE+MK+FKAQRI+T GVI RVK LF
Sbjct: 15  GQPSTSGKLTTNDALSYLRDVKVKFQDNKEIYDEFLEIMKEFKAQRINTEGVIRRVKTLF 74

Query: 95  KGHRDLILGFNTFLPKGYEITLPLEDEQ------PPPKKPVEFEEAINFVNKIKTRFQGD 148
           KGHR+LILGFNTFLP+GYEIT+   DE+        PK  VEF++AIN+VNKIKTRF  D
Sbjct: 75  KGHRELILGFNTFLPQGYEITMDEVDEEERGAQAQAPKAAVEFDQAINYVNKIKTRFAND 134

Query: 149 DHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPS 208
           + VYK+FL+ILN+YRK  K+I  VY+EV  LF+ H DLLEEFT+FLPD+   A      S
Sbjct: 135 ERVYKAFLEILNLYRKGQKTIGNVYEEVALLFRQHHDLLEEFTYFLPDAQAPAQACSHIS 194

Query: 209 GRNSI 213
           GR  +
Sbjct: 195 GRKGL 199



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 42/164 (25%), Positives = 75/164 (45%), Gaps = 17/164 (10%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFN 105
           + A+ Y+  +K  F +    Y  FLE++  ++  +     V   V  LF+ H DL+  F 
Sbjct: 118 DQAINYVNKIKTRFANDERVYKAFLEILNLYRKGQKTIGNVYEEVALLFRQHHDLLEEFT 177

Query: 106 TFLP---------------KGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDH 150
            FLP               KG +  +  +D++    +     + ++F  K+KTR +  + 
Sbjct: 178 YFLPDAQAPAQACSHISGRKGLQQEINDDDDRRGTVRS-NLAKELSFFEKVKTRLRNREQ 236

Query: 151 VYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFL 194
            Y+ FL  LN++ +E  +  E+   V+ +   +PDLL  F  FL
Sbjct: 237 -YQDFLKCLNLFAQEIVAKPELQIMVQDILGRYPDLLMSFNDFL 279



 Score = 47.4 bits (111), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 22/80 (27%), Positives = 43/80 (53%)

Query: 116 LPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQE 175
           LP    QP     +   +A++++  +K +FQ +  +Y  FL+I+  ++ +  +   V + 
Sbjct: 10  LPHRPGQPSTSGKLTTNDALSYLRDVKVKFQDNKEIYDEFLEIMKEFKAQRINTEGVIRR 69

Query: 176 VEALFQDHPDLLEEFTHFLP 195
           V+ LF+ H +L+  F  FLP
Sbjct: 70  VKTLFKGHRELILGFNTFLP 89


>gi|356526874|ref|XP_003532041.1| PREDICTED: paired amphipathic helix protein Sin3-like 3-like
           [Glycine max]
          Length = 280

 Score =  327 bits (838), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 164/281 (58%), Positives = 202/281 (71%), Gaps = 13/281 (4%)

Query: 402 MDGFNGFLARCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDRE 461
           M GFN  + +C+K  E   D         E  + K +K+ED +RDR  + DD VK+   +
Sbjct: 1   MKGFNECVTQCKKMNESSRD---------EEHVQKQIKLEDWNRDRHHDGDDRVKETVSD 51

Query: 462 AREKDRLDKSVAFVNKDV-GPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYL 520
            R++D   KS    NK+V G K+S+Y+SK K  AK ++ELDLS CE+CTPSY LLPK + 
Sbjct: 52  CRKRD---KSTVVANKNVSGRKLSLYASKKKNSAKSVRELDLSICEKCTPSYYLLPKEFQ 108

Query: 521 IPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESV 580
           IPS+S+RT+L AEVLNDHW  V    +DYS KHM KN  E +LF CEDDR ELDM LE+ 
Sbjct: 109 IPSSSRRTKLDAEVLNDHWKCVAPSIKDYSSKHMSKNLNEMTLFECEDDRIELDMCLETA 168

Query: 581 NVTTKRVEELLEKINNNTIKTDGPIRVEDHFTALNLRCIERLYGDHGLDVMDVLRKNASL 640
             TTK+VEEL+EKIN N I+ D PI +E H  A NLRCIE+LYGDHG+DV+DVLRKNAS 
Sbjct: 169 KSTTKQVEELIEKINTNMIERDNPINIEKHLIAQNLRCIEQLYGDHGIDVLDVLRKNASQ 228

Query: 641 ALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDH 681
            LPVILTRLKQK EEWARCR+D NK+WAE+Y+KNYHKSL+H
Sbjct: 229 VLPVILTRLKQKHEEWARCRADLNKLWAEVYAKNYHKSLNH 269


>gi|308799339|ref|XP_003074450.1| Histone deacetylase complex, SIN3 component (ISS) [Ostreococcus
           tauri]
 gi|116000621|emb|CAL50301.1| Histone deacetylase complex, SIN3 component (ISS) [Ostreococcus
           tauri]
          Length = 1156

 Score =  325 bits (834), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 178/432 (41%), Positives = 260/432 (60%), Gaps = 59/432 (13%)

Query: 355 FCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLARC 412
           F EK K +LR  D Y EF++ L+++   II++ E+ +L  D+LG++P+L  GF+ F+ARC
Sbjct: 356 FFEKAKARLRNRDAYNEFIKILNIFNLGIISKMEMSTLAFDILGKFPELQSGFSDFVARC 415

Query: 413 EKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRLDKSV 472
           E  +      M+KK    E   PK +++                                
Sbjct: 416 EALD--FDPSMAKKP--PEKLSPKDLQL-------------------------------- 439

Query: 473 AFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGA 532
                     M +   ++K+++KPI ELDLS+CERC PSYRLLPKN+    AS R++L  
Sbjct: 440 ----------MKVVQEREKFVSKPISELDLSSCERCGPSYRLLPKNFPPAPASTRSQLCK 489

Query: 533 EVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLE 592
           +VLND+WV+VTSGSEDYSFK MRKNQYEE+LFRCEDDRFE+DM+LE+      R+++  E
Sbjct: 490 DVLNDNWVAVTSGSEDYSFKAMRKNQYEEALFRCEDDRFEIDMVLETTRSCIDRLQQYEE 549

Query: 593 KINNNTIKT-DGPIRVEDHFTALNLRCIERLYGDHGLDVMDVLRKNASLA-LPVILTRLK 650
           ++     +  +  +  E +  A+++R I R+YG+ G D M  L K A  A +PV+L RL 
Sbjct: 550 ELKAMPEEARENAVMPEGYLGAVSMRAIVRIYGERG-DEMGYLVKTAPQATIPVVLKRLN 608

Query: 651 QKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKK 710
           QK EEW + +S+   +W ++Y KNY KSLDH+SFYFKQ D KSL AK +S EIKEI++KK
Sbjct: 609 QKMEEWRQLKSEMLPIWDDVYLKNYAKSLDHQSFYFKQMDKKSLSAKGMSQEIKEINDKK 668

Query: 711 RKEDDVLLAIAAGNRRSIV---PHLEFEYSDPDIHEDLYQLIKYSCGEMCTTEQLDKVMK 767
           +  DDV+     G     +   P L  +YSD  +H+D+Y +IK+S  EM + +Q ++V++
Sbjct: 669 KSSDDVI-----GKGMPPIDESPDLTIDYSDARVHDDVYAVIKFSTNEMLSVDQGERVLQ 723

Query: 768 IWTTFLEPMLGV 779
           ++  F+E    V
Sbjct: 724 LYRNFVESFFNV 735



 Score =  197 bits (500), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 110/232 (47%), Positives = 141/232 (60%), Gaps = 26/232 (11%)

Query: 1   MKRSRDEVYMNSQI-KRPMISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIF 59
           MKR RD+ +    + KRP               G G    +++    +AL YLK +K+  
Sbjct: 120 MKRGRDDAHAGGAVAKRP---------------GTGTKDQSEQARKQEALTYLKELKERL 164

Query: 60  QDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEI----- 114
           +DK+  YD+FLE+MK+FKAQR+DT GVI RVK +F GH DLILGFN FLP+G+EI     
Sbjct: 165 RDKKHTYDEFLEIMKEFKAQRLDTEGVIKRVKTIFAGHVDLILGFNQFLPRGHEIRREDM 224

Query: 115 ----TLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSIT 170
                      Q   K  VEF  AI++VNKIK+RF  D+ VYK+FL+ILNMYRK  K+I+
Sbjct: 225 EREAEEARARAQGGGKPQVEFVHAISYVNKIKSRFANDERVYKNFLEILNMYRKNLKTIS 284

Query: 171 EVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMP 222
           +VY EV  LF  HPDLLEEFT+FLPDS+  A+       R +I R R  A P
Sbjct: 285 QVYDEVAQLFHAHPDLLEEFTYFLPDSTQPAAGKKGRGARGAI-RGRRGAPP 335



 Score = 43.5 bits (101), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 3/64 (4%)

Query: 349 FSQELSFCEKVKDKLRDD---YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGF 405
           F   +S+  K+K +  +D   Y+ FL  L++Y K + T S++   V  L   +PDL++ F
Sbjct: 245 FVHAISYVNKIKSRFANDERVYKNFLEILNMYRKNLKTISQVYDEVAQLFHAHPDLLEEF 304

Query: 406 NGFL 409
             FL
Sbjct: 305 TYFL 308


>gi|145340941|ref|XP_001415575.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144575798|gb|ABO93867.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 962

 Score =  317 bits (813), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 169/431 (39%), Positives = 258/431 (59%), Gaps = 57/431 (13%)

Query: 355 FCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLARC 412
           F EKVK +LR  D Y EF++ L+++   IIT+ E+ +L  D+LG++P+L  GF+ F+ARC
Sbjct: 211 FFEKVKARLRNRDAYNEFIKILNIFNMGIITKMEMSTLAYDILGKFPELQSGFSDFVARC 270

Query: 413 EKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRLDKSV 472
           E  +      M+K+    E   PK +++                                
Sbjct: 271 EALD--FDPSMAKRP--PEKLSPKDLQL-------------------------------- 294

Query: 473 AFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGA 532
                     M + + ++K+++KPI ELDLS  ERC PSYRLLPKN+     + RT+L  
Sbjct: 295 ----------MKVVAEREKFVSKPISELDLSMSERCGPSYRLLPKNFPPAPCTTRTQLCK 344

Query: 533 EVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLE 592
           +VLND+WV+VTSGSEDYSFK MRKNQYEE+LFRCEDDRFE+DM+LE+     +++++  E
Sbjct: 345 DVLNDNWVAVTSGSEDYSFKAMRKNQYEEALFRCEDDRFEIDMVLETTKSCIEKLQKFEE 404

Query: 593 KINNNTIKTDG-PIRVEDHFTALNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQ 651
           +IN    +  G  +  E +  A+  R I R+YGD G ++  +++      +P++L RL Q
Sbjct: 405 EINAMPEEARGAAVMPEGYLGAVCERAILRIYGDRGDEIGYLVKTAPQATIPIVLKRLHQ 464

Query: 652 KQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKR 711
           KQEEW   +++   +W+++Y+KNY KSLDH+SFYFKQ D K+L  K ++ E+KE+++KK+
Sbjct: 465 KQEEWVELKNEMMPIWSDVYTKNYAKSLDHQSFYFKQMDKKALSMKGMAQEVKELNDKKK 524

Query: 712 KEDDVLLAIAAGNRRSIV---PHLEFEYSDPDIHEDLYQLIKYSCGEMCTTEQLDKVMKI 768
             D+V+     G     V   P L  +YSD  +H+D+Y +IK+S  EM  +EQ ++V+ +
Sbjct: 525 TSDEVI-----GKGMPPVDESPDLTLDYSDARVHDDVYAVIKFSTNEMLNSEQGERVLTL 579

Query: 769 WTTFLEPMLGV 779
           +  F+E    V
Sbjct: 580 YRNFVESFFNV 590



 Score =  189 bits (480), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 94/171 (54%), Positives = 128/171 (74%), Gaps = 8/171 (4%)

Query: 40  AQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRD 99
           ++K    +AL+YL+ +K+  +DKR  YD+FLE+MK+FKA R+DT GVI RVK +F+GH D
Sbjct: 2   SEKARKQEALSYLRELKERLRDKRHTYDEFLEIMKEFKANRLDTEGVIKRVKRIFRGHTD 61

Query: 100 LILGFNTFLPKGYEITLP---LEDEQPP-----PKKPVEFEEAINFVNKIKTRFQGDDHV 151
           LILGFN FLP+G+EIT+     +DE+        K  VEF  AI++VNKIK+RF  D+ V
Sbjct: 62  LILGFNQFLPRGHEITVADIERDDEEAMDHGVRAKPQVEFVHAISYVNKIKSRFSNDERV 121

Query: 152 YKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAAS 202
           YK+FL+ILNMYRK  K+I++VY+EV  LF+ H DLL+EFT+FLPDS+  A+
Sbjct: 122 YKNFLEILNMYRKNVKTISQVYEEVAQLFKHHHDLLDEFTYFLPDSTQPAA 172



 Score = 41.2 bits (95), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 3/64 (4%)

Query: 349 FSQELSFCEKVKDKLRDD---YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGF 405
           F   +S+  K+K +  +D   Y+ FL  L++Y K + T S++   V  L   + DL+D F
Sbjct: 101 FVHAISYVNKIKSRFSNDERVYKNFLEILNMYRKNVKTISQVYEEVAQLFKHHHDLLDEF 160

Query: 406 NGFL 409
             FL
Sbjct: 161 TYFL 164


>gi|452821801|gb|EME28827.1| paired amphipathic helix protein Sin3a [Galdieria sulphuraria]
          Length = 1302

 Score =  308 bits (789), Expect = 9e-81,   Method: Compositional matrix adjust.
 Identities = 194/586 (33%), Positives = 295/586 (50%), Gaps = 113/586 (19%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDL 186
           KPVE ++AI++V KIK RF     VY+ FLDIL+ Y+KE KSI +VY++V  LFQ H DL
Sbjct: 487 KPVELDQAIHYVKKIKQRFAMQPQVYRQFLDILHSYQKEQKSIKQVYEQVATLFQHHVDL 546

Query: 187 LEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQVHVDKKERAMASHADRDL-- 244
           LEEFT+FLP+S+  A                             K  ++ A+  D+ +  
Sbjct: 547 LEEFTNFLPESASQA-----------------------------KASKSFATSQDKSIHP 577

Query: 245 SVDRPDPDHDRVLLKSDKDQRRRGEKERERRDDHRRERERDDRDFENDVNRDFSMQRFPH 304
           S    +       + SD++   R    +E +   ++ +  +                   
Sbjct: 578 SSGNANQRSQPYFVVSDEEMHPRKVSSQEWKASSKQPKREE------------------- 618

Query: 305 KRKSARKIEDSTAEPLHQGGEGDENFGMHPVSSSYDDKNAMKSMFSQELSFCEKVKDKLR 364
           KRK A+K + +T +  H+              +S   KN+M           E+++ +L 
Sbjct: 619 KRKEAKKRQSTTTDKAHESQVSR---------ASLLTKNSMI--------LFEQIRKELG 661

Query: 365 DD----YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLARCEKSEELLA 420
            +    Y EF++CL L+++ II+R+EL  L  +L    P L + F  FL         + 
Sbjct: 662 PEQKYIYSEFIKCLSLFSQGIISRAELLMLCQELFAEKPALYEAFQTFLQSSSAGPGAVE 721

Query: 421 DVMS--KKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRLDKSVAFVNKD 478
           + MS  + S W      K  + +   R+   E  D  K                      
Sbjct: 722 EAMSILQSSQWR-----KEYQQKKSGRNASVEGFDATKS--------------------- 755

Query: 479 VGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDH 538
                        +  KP+ E+ L + E CT SYR LP N+  PS S R  L   VLND 
Sbjct: 756 -------------WSYKPLSEIALESEETCTVSYRKLPDNFPRPSCSGRGPLENAVLNDS 802

Query: 539 WVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNT 598
           WVS+ +GSED+SFKHMRKNQYE++LFRCEDDR+ELDM++E+   T  ++E +   +   T
Sbjct: 803 WVSLPTGSEDFSFKHMRKNQYEDNLFRCEDDRYELDMVIETNAATIAKLEPIAAAVQQMT 862

Query: 599 IKTDGPIRV-EDHFTALNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWA 657
           ++      + E   + ++L+ IER+YG+HG  V++ ++++ S+ + ++L+RLKQK  EW 
Sbjct: 863 LEQRSRYALAEGILSPIHLKAIERIYGEHGPSVVEQVKQSPSVTVGIVLSRLKQKDVEWR 922

Query: 658 RCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEI 703
           R R + NK+W E   KNY+KSLDHRSFYFKQ D K+L +K+L A++
Sbjct: 923 RTRLEMNKMWRETVEKNYYKSLDHRSFYFKQTDRKALNSKSLVAQV 968



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 46/77 (59%), Positives = 58/77 (75%)

Query: 41  QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDL 100
           +KL   DALAYL+ VK  F D+   Y+ FL++MKDFK+Q IDT GV+ARV ELF+GH +L
Sbjct: 312 RKLKVEDALAYLEQVKTQFNDQPHVYNKFLDIMKDFKSQAIDTNGVMARVSELFRGHPNL 371

Query: 101 ILGFNTFLPKGYEITLP 117
           ILGFN FLP G +I +P
Sbjct: 372 ILGFNAFLPPGCKIEVP 388



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 39/67 (58%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           ++ E+A+ ++ ++KT+F    HVY  FLDI+  ++ +      V   V  LF+ HP+L+ 
Sbjct: 314 LKVEDALAYLEQVKTQFNDQPHVYNKFLDIMKDFKSQAIDTNGVMARVSELFRGHPNLIL 373

Query: 189 EFTHFLP 195
            F  FLP
Sbjct: 374 GFNAFLP 380



 Score = 43.5 bits (101), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 19/65 (29%), Positives = 36/65 (55%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFN 105
           + A+ Y+K +K  F  + + Y  FL+++  ++ ++     V  +V  LF+ H DL+  F 
Sbjct: 492 DQAIHYVKKIKQRFAMQPQVYRQFLDILHSYQKEQKSIKQVYEQVATLFQHHVDLLEEFT 551

Query: 106 TFLPK 110
            FLP+
Sbjct: 552 NFLPE 556


>gi|414877956|tpg|DAA55087.1| TPA: hypothetical protein ZEAMMB73_922770 [Zea mays]
          Length = 786

 Score =  295 bits (755), Expect = 9e-77,   Method: Compositional matrix adjust.
 Identities = 155/268 (57%), Positives = 189/268 (70%), Gaps = 37/268 (13%)

Query: 464 EKDRLDKSVAFVNKD-VGPKMSMYSSKDKY-LAKPIQELDLSNCERCTPSYRLLPKNYLI 521
           E+ + ++ + F +K+    + S + SK+KY L KPI ELDLSNC+ CTPSYRLLPKNY +
Sbjct: 436 ERGKSERVLTFNSKEGAAHEASTFPSKEKYNLCKPISELDLSNCQWCTPSYRLLPKNYPV 495

Query: 522 PSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVN 581
           PSAS+RT++ A VLND  V VTSGS   +FKHMRKNQYEE LF CEDD FELD+LLESV+
Sbjct: 496 PSASKRTDIEASVLNDFCVLVTSGSG--AFKHMRKNQYEEILFICEDDMFELDVLLESVS 553

Query: 582 VTTKRVEELLEKINNNTIKTDGPIRVEDHFTALNLRCIERLYGDHGLDVMDVLRKNASLA 641
           VT KRVEEL+E +  N++K D  I +++H T+LN+RCIE LYGDHGLDV+DVL+KNA + 
Sbjct: 554 VTIKRVEELVESMEGNSLKPDSSIHLDEHLTSLNMRCIEWLYGDHGLDVVDVLQKNAGVT 613

Query: 642 LPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSA 701
           LPVILTRLKQKQEEW+ C+SDFNKVW                                 A
Sbjct: 614 LPVILTRLKQKQEEWSMCQSDFNKVW---------------------------------A 640

Query: 702 EIKEISEKKRKEDDVLLAIAAGNRRSIV 729
           EI EISEK RK DDVLLAI+AGNR  +V
Sbjct: 641 EINEISEKNRKGDDVLLAISAGNRWPLV 668



 Score =  226 bits (576), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 140/298 (46%), Positives = 187/298 (62%), Gaps = 29/298 (9%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
           LT  DALAY+KAVKD FQ+KR  Y+ FL+VM+DFK+ R+D+AG+IARVK LF G+ DL+L
Sbjct: 25  LTARDALAYIKAVKDNFQEKRHTYEQFLQVMRDFKSNRLDSAGLIARVKTLFHGYPDLVL 84

Query: 103 GFNTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMY 162
           G N FLPKG+ I      E    K+PV++  AIN VN+IK RFQ ++HVYKSFL IL+MY
Sbjct: 85  GINAFLPKGHAIRPQDLSED---KEPVDYPRAINLVNRIKIRFQQEEHVYKSFLGILSMY 141

Query: 163 RKENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILR--DRSSA 220
           R +NK I +VY EV  LF  HPDLLEEFTHFLPD+     I    +G  S +R  D+++ 
Sbjct: 142 RMDNKPIQDVYDEVTLLFHGHPDLLEEFTHFLPDT----PIPPPEAGTTSKVRNDDKNAI 197

Query: 221 MPTARQVHVDKKERAMASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERRDDHRR 280
             +A +    + ERA+ S AD D SVDR D +HD      +KD+ R    + + R D++R
Sbjct: 198 THSAMRAQTVQSERALPSAADSDSSVDRLDLEHDIQKECIEKDKVRNACHD-QHRGDYKR 256

Query: 281 ERERDDRDFEN-DVNRDFSMQRFPHKRKSARKIEDSTAEPLHQGGEGDENFGMHPVSS 337
            R  D  ++EN D++ +   Q  P   KS RK+E          G GD+  G+  +SS
Sbjct: 257 NRMND--EYENEDLDAE---QSGP---KSQRKVE----------GTGDDTPGVVTMSS 296



 Score = 42.4 bits (98), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 18/122 (14%)

Query: 216 DRSSAMPTARQVHVDKKERAMASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERR 275
           ++++ M +A +    ++ERA+ S AD D SVDR D +HD      +KD+ R     + RR
Sbjct: 316 NKNAIMHSAMRAQTVQRERALLSAADSDSSVDRLDLEHDIRKGCIEKDKVRNACHGQHRR 375

Query: 276 DDHRRERERDDRDFENDVNRDFSMQRFPHKRKSARKIEDSTAEPLHQGGEGDENFGMHPV 335
            D++R R+ D  ++EN+   D   +R     KS RK+E          G GD++ G+  +
Sbjct: 376 -DYKRNRKND--EYENE---DLDAER--SGPKSQRKVE----------GTGDDSPGIAAM 417

Query: 336 SS 337
           SS
Sbjct: 418 SS 419


>gi|307179504|gb|EFN67818.1| Paired amphipathic helix protein Sin3a [Camponotus floridanus]
          Length = 1494

 Score =  274 bits (700), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 209/662 (31%), Positives = 315/662 (47%), Gaps = 118/662 (17%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI----------------- 169
           +PVEF  AIN+VNKIK RFQG    YK FL+IL+ Y+KE +++                 
Sbjct: 372 QPVEFNHAINYVNKIKNRFQGQPDKYKRFLEILHTYQKEQRNLKESGHMGGTSSGATSGG 431

Query: 170 -----TEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTA 224
                 EVY +V  LF++  DLL EF  FLPD++           + S L ++++++   
Sbjct: 432 KHLTEAEVYSQVAKLFENQEDLLAEFGQFLPDATN----------QQSSLTNKTTSI--N 479

Query: 225 RQVHVDKKERAMASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERRDDHRRERER 284
               + KK   + +  +   ++ R              D R  G      RD+       
Sbjct: 480 DHTAIVKKPIGLKTPYNNSGTISR--------------DLRESGSTAGLERDNRDHRERE 525

Query: 285 DDRDFEN--DVNRDFSMQRFPHK----RKSARKIEDSTAEPLH--QGGEGDENFGMHPVS 336
            +RD  N  D+N   S Q+F H     ++S      +TA   H  Q G G       P  
Sbjct: 526 RERDRSNVRDIN---SGQKFGHNTGQLKRSPSFSTSATAGNSHHVQYGSGGPPPLKKPKV 582

Query: 337 SSYDD---KNAMKSMFSQELSFCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLV 391
           +S  D     A K     + +F +KV+  LR  D Y+ FLRCL L+ +EI+++SEL  LV
Sbjct: 583 ASMRDVTIAEAGKYGTLNDYAFFDKVRKSLRSQDVYENFLRCLVLFNQEIVSKSELVLLV 642

Query: 392 GDLLGRYPDLMDGFNGFLARCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRER 451
              LGRYP+L+  F  FL              S  ++  E   P SV             
Sbjct: 643 TPFLGRYPELLRWFKDFLGYLPADSSATTTTNSGNAVGVE-TFPNSVV------------ 689

Query: 452 DDGVKDRDREAREKDRLDKSVAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPS 511
                   R  +E+ + D ++                          E+D + C+R   S
Sbjct: 690 --------RSHQERPQNDLAI--------------------------EIDYAACKRLGAS 715

Query: 512 YRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRF 571
           Y  LPK+Y+ P    RT+L  EVLND WVS  + SED +F   RK QYEES++RCED+RF
Sbjct: 716 YCALPKSYIQPKCGGRTQLCKEVLNDTWVSFPTWSEDSTFVTSRKTQYEESIYRCEDERF 775

Query: 572 ELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TALNLRCIERLYGDHG 627
           ELD+++E+   T + +E + +K+N  + +     +++D        ++ R I+R+YGD  
Sbjct: 776 ELDVVIETNAATIRVLEGVHKKMNRMSQEEAQKYKLDDCLGGSSPTIHQRAIKRIYGDKS 835

Query: 628 LDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFK 687
            D+++ L+KN  +A+P++L RLK K+EEW   +  FNK+W E   K Y KSLDH+   FK
Sbjct: 836 HDIIEGLKKNPQIAVPIVLRRLKAKEEEWREAQKGFNKIWREQNEKYYLKSLDHQGINFK 895

Query: 688 QQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQ 747
           Q D K+L +K+L  EI+ I +++ ++ D       GN     PHL   Y D  + +D   
Sbjct: 896 QNDVKALRSKSLFNEIETIYDERHEQGDDGNGDGQGNHG---PHLILPYKDKSVLDDAAN 952

Query: 748 LI 749
           L+
Sbjct: 953 LL 954



 Score =  103 bits (257), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 55/98 (56%), Positives = 69/98 (70%), Gaps = 3/98 (3%)

Query: 17  PMISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDF 76
           P+ S+   P G  Q  GGGGG   Q+L   DAL+YL  VK  F D+ + Y+DFL++MK+F
Sbjct: 155 PLAST---PPGSNQGGGGGGGSQFQRLKVEDALSYLDQVKYKFSDQPQVYNDFLDIMKEF 211

Query: 77  KAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEI 114
           K+Q IDT GVI RV  LFKGH +LI+GFNTFLP GY+I
Sbjct: 212 KSQSIDTPGVITRVSHLFKGHPELIVGFNTFLPPGYKI 249



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 40/67 (59%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           ++ E+A+++++++K +F     VY  FLDI+  ++ ++     V   V  LF+ HP+L+ 
Sbjct: 178 LKVEDALSYLDQVKYKFSDQPQVYNDFLDIMKEFKSQSIDTPGVITRVSHLFKGHPELIV 237

Query: 189 EFTHFLP 195
            F  FLP
Sbjct: 238 GFNTFLP 244



 Score = 46.2 bits (108), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 54/125 (43%), Gaps = 23/125 (18%)

Query: 8   VYMNSQIKRPMISSRGEPSGQTQVVGGGGGGG-AQKLTTNDALAYLKAVKDIFQDKREKY 66
           VY NS +      +  +   Q   V  GG    +Q +  N A+ Y+  +K+ FQ + +KY
Sbjct: 338 VYNNSHVSTAQAQAVSQALSQADGVSTGGQTQQSQPVEFNHAINYVNKIKNRFQGQPDKY 397

Query: 67  DDFLEVMKDF-KAQR---------------------IDTAGVIARVKELFKGHRDLILGF 104
             FLE++  + K QR                     +  A V ++V +LF+   DL+  F
Sbjct: 398 KRFLEILHTYQKEQRNLKESGHMGGTSSGATSGGKHLTEAEVYSQVAKLFENQEDLLAEF 457

Query: 105 NTFLP 109
             FLP
Sbjct: 458 GQFLP 462


>gi|307192439|gb|EFN75655.1| Paired amphipathic helix protein Sin3a [Harpegnathos saltator]
          Length = 1529

 Score =  273 bits (698), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 206/660 (31%), Positives = 312/660 (47%), Gaps = 117/660 (17%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI----------------- 169
           +PVEF  AIN+VNKIK RFQG    YK FL+IL+ Y+KE +++                 
Sbjct: 375 QPVEFNHAINYVNKIKNRFQGQPDKYKRFLEILHTYQKEQRNLKESSHMGGTSSGYGTGG 434

Query: 170 ------TEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPT 223
                  EVY +V  LF++  DLL EF  FLPD++           + S L ++++++  
Sbjct: 435 GKHLTEAEVYSQVAKLFENQEDLLAEFGQFLPDATN----------QQSSLTNKTTSV-- 482

Query: 224 ARQVHVDKKERAMASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERRDDHRRERE 283
                + KK   + +  +   ++ R              D R         RD       
Sbjct: 483 NDHATIVKKPIGLKTSYNNSGAISR--------------DLREPSGTTGLERDARDHRER 528

Query: 284 RDDRDFEN--DVNRDFSMQRFPHK----RKSARKIEDSTAEPLHQGGEGDENFGMHPVSS 337
             +RD  +  DVN   S Q+F H     ++S       TA   H    G      H V+S
Sbjct: 529 ERERDRASIRDVN---SGQKFGHSTGQLKRSPSFSTSVTAGNSHHLQHGPPPLKKHKVAS 585

Query: 338 SYDDKNAMKSMFS--QELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGD 393
             D   A    +    + +F +KV+  LR    Y+ FLRCL L+ +EI+++SEL  LV  
Sbjct: 586 MRDVTIAEAGKYGTLNDYAFFDKVRKALRSQEVYENFLRCLVLFNQEIVSKSELVLLVTP 645

Query: 394 LLGRYPDLMDGFNGFLARCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDD 453
            LGR+P+L+  F  FL     S    A  M+  S         +  VE    +  R    
Sbjct: 646 FLGRFPELLRWFKDFLGHLTDSS---ATTMTNAS--------GATGVETFPNNVVRSH-- 692

Query: 454 GVKDRDREAREKDRLDKSVAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYR 513
                    +E+ + D ++                          E+D + C+R   SY 
Sbjct: 693 ---------QERPQGDLAI--------------------------EIDYTACKRLGASYC 717

Query: 514 LLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFEL 573
            LPK+Y+ P  S RT+L  EVLND WVS  + SED +F   RK QYEES++RCED+RFEL
Sbjct: 718 ALPKSYVQPKCSGRTQLCKEVLNDTWVSFPTWSEDSTFVTSRKTQYEESIYRCEDERFEL 777

Query: 574 DMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TALNLRCIERLYGDHGLD 629
           D ++E+   T + +E + +K+N  + +     +++D        ++ R ++R+YGD   D
Sbjct: 778 DGVIETNAATIRVLEGVHKKMNRMSQEELQKFKLDDCLGGSSPTIHQRALKRIYGDKATD 837

Query: 630 VMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQ 689
           ++D L+KN  +A+PV+L RLK K+EEW   +  FNK+W E   K Y KSLDH+   FKQ 
Sbjct: 838 IIDGLKKNPVVAVPVVLRRLKSKEEEWREAQKGFNKIWREQNEKYYLKSLDHQGINFKQN 897

Query: 690 DSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLI 749
           D K+L +K+L  EI+ + +++ ++ D       GN     PHL   Y D  + +D   L+
Sbjct: 898 DVKALRSKSLFNEIETLCDERHEQGDEGSGDGQGNSG---PHLVLPYKDKTVLDDAANLL 954



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 47/81 (58%), Positives = 59/81 (72%)

Query: 34  GGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKEL 93
           G G    Q+L   DAL+YL  VK  F D+ + Y+DFL++MK+FK+Q IDT GVI RV  L
Sbjct: 172 GSGSQQFQRLKVEDALSYLDQVKYKFSDQPQVYNDFLDIMKEFKSQSIDTPGVITRVSHL 231

Query: 94  FKGHRDLILGFNTFLPKGYEI 114
           FKGH +LI+GFNTFLP GY+I
Sbjct: 232 FKGHPELIVGFNTFLPPGYKI 252



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 40/67 (59%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           ++ E+A+++++++K +F     VY  FLDI+  ++ ++     V   V  LF+ HP+L+ 
Sbjct: 181 LKVEDALSYLDQVKYKFSDQPQVYNDFLDIMKEFKSQSIDTPGVITRVSHLFKGHPELIV 240

Query: 189 EFTHFLP 195
            F  FLP
Sbjct: 241 GFNTFLP 247



 Score = 42.7 bits (99), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 33/126 (26%), Positives = 52/126 (41%), Gaps = 24/126 (19%)

Query: 8   VYMNSQIKRPMISSRGEPSGQTQ-VVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKY 66
           VY NS +      +  +   Q   V   G     Q +  N A+ Y+  +K+ FQ + +KY
Sbjct: 341 VYNNSHVSTAQAQAVSQALNQADGVTNSGQTQQNQPVEFNHAINYVNKIKNRFQGQPDKY 400

Query: 67  DDFLEVMKDF-KAQR----------------------IDTAGVIARVKELFKGHRDLILG 103
             FLE++  + K QR                      +  A V ++V +LF+   DL+  
Sbjct: 401 KRFLEILHTYQKEQRNLKESSHMGGTSSGYGTGGGKHLTEAEVYSQVAKLFENQEDLLAE 460

Query: 104 FNTFLP 109
           F  FLP
Sbjct: 461 FGQFLP 466


>gi|110743452|dbj|BAE99612.1| hypothetical protein [Arabidopsis thaliana]
          Length = 726

 Score =  268 bits (685), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 173/347 (49%), Positives = 217/347 (62%), Gaps = 28/347 (8%)

Query: 683  SFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIH 742
            SFYFKQQDSK L  KAL AEIKEI+EKKR EDD LLA AAGNR SI P LEF+Y D D+H
Sbjct: 1    SFYFKQQDSKKLSMKALLAEIKEITEKKR-EDDSLLAFAAGNRLSISPDLEFDYPDHDLH 59

Query: 743  EDLYQLIKYSCGEMCTTEQLDKVMKIWTTFLEPMLGVPSRPQGAEDTEDVVKAKSHTVKS 802
            EDLYQLIKYSC EMC+TEQLDKVMKIWTTF+E + GVPSRPQGAED EDVVK+ +  VKS
Sbjct: 60   EDLYQLIKYSCAEMCSTEQLDKVMKIWTTFVEQIFGVPSRPQGAEDQEDVVKSMNQNVKS 119

Query: 803  RAASVGDSDGSPDGDAAAMTSKHSNPSRNGDESIPPEQSSSSRAWLPNGDHGIKEDVSVE 862
             ++S G+S+GSP   A+   S+ S  SR  +E     Q+S+S     +G  G        
Sbjct: 120  GSSSAGESEGSPHNYASVADSRRSKSSRKANEHSQLGQTSNSER---DGAAG-------- 168

Query: 863  ADHNARKSDNFCDSSEQDKVQNNAAMADETSGISKQASTNERLIGTNA-AIAAAADQSNG 921
                 R SD  C++++ +K+  N   +DE    SKQA + ER   + A A+    DQSNG
Sbjct: 169  -----RTSDALCETAQHEKMLKNVVTSDEKPE-SKQAVSIERAHDSTALAVDGLLDQSNG 222

Query: 922  RSNIENTSGLSVAHSRPGNHIVEGGLELRSSNEILPSSEGGECSRQNISTNGVMTEGAKI 981
             S+I + +G    + +P     E  LEL+ ++   P  E G    + + TNG+  E    
Sbjct: 223  GSSIVHMTGHCNNNLKPVTCGTE--LELKMNDGNGPKLEVG---NKKLLTNGIAVE---- 273

Query: 982  LRYNAESVKQFKIEREEGELSPNGDFEEDNFAVYGESGLEAVHKAKD 1028
            +  + E     K+EREEGELSPNGDFEEDNFAVY ++  E   KA D
Sbjct: 274  ITSDQEMAGTSKVEREEGELSPNGDFEEDNFAVYAKTDFETFSKAND 320


>gi|380021387|ref|XP_003694548.1| PREDICTED: LOW QUALITY PROTEIN: paired amphipathic helix protein
           Sin3b-like [Apis florea]
          Length = 1526

 Score =  263 bits (672), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 204/659 (30%), Positives = 314/659 (47%), Gaps = 114/659 (17%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI----------------- 169
           +PVEF  AIN+VNKIK RFQG    YK FL+IL+ Y+KE +++                 
Sbjct: 375 QPVEFNHAINYVNKIKNRFQGQPDKYKRFLEILHTYQKEQRNLKESGHMGGTSGSGASGG 434

Query: 170 ------TEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPT 223
                  EVY +V  LF++  DLL EF  FLPD++   S     S + + + D ++ +  
Sbjct: 435 AKHLTEAEVYSQVAKLFENQEDLLAEFGQFLPDATNQQS---ALSNKTATVNDHTTIV-- 489

Query: 224 ARQVHVDKKERAMASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERRDDHRRERE 283
            ++    K     + +  RDL                 ++       ERE RD   RERE
Sbjct: 490 -KKPLGPKAPYNNSGNISRDL-----------------RESSGINTIERETRDHRDRERE 531

Query: 284 RDDRDFENDVNRDFSMQRFPHK----RKSARKIEDSTAEPLHQGGEGDENFGMHPVSS-- 337
           RD      D+N   S+Q+  H     ++S       TA   H    G      H VSS  
Sbjct: 532 RDRSGIR-DIN---SVQKLGHNTGQLKRSPSFSPSVTAGNSHHIQHGPPPLKKHKVSSMR 587

Query: 338 -SYDDKNAMKSMFSQELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDL 394
                  A K     + +F +KV+  LR    Y+ FLRCL L+ +EI+++SEL  LV   
Sbjct: 588 ECVTIAEAGKYGSLNDYAFFDKVRKALRSQEVYENFLRCLVLFNQEIVSKSELVQLVTPF 647

Query: 395 LGRYPDLMDGFNGFLARCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDG 454
           LGR+P+L+  F  FL                      G +P+S      +   +      
Sbjct: 648 LGRFPELLRWFKDFL----------------------GHLPESSNTNTTNASSN------ 679

Query: 455 VKDRDREAREKDRLDKSVAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRL 514
                               +N +  P   + S +++       E+D + C+R   SY  
Sbjct: 680 --------------------LNVEALPNNVVRSHQERPQGDLAMEIDYTACKRLGASYCA 719

Query: 515 LPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELD 574
           LPK+Y+ P  + RT+L  EVLND WVS  + SED +F   RK QYEE ++RCED+RFELD
Sbjct: 720 LPKSYVQPKCTGRTQLCKEVLNDTWVSFPTWSEDSTFVTSRKTQYEEFIYRCEDERFELD 779

Query: 575 MLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TALNLRCIERLYGDHGLDV 630
            ++E+   T + +E + +K++  + +     +++D        ++ R ++R+YGD   D+
Sbjct: 780 GVIETNASTIRVLEGVHKKMSRMSQEELQKFKLDDCLGGCSPTIHQRALKRIYGDKAADI 839

Query: 631 MDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQD 690
           +D L+KN  +A+PV+L RLK K+EEW   +  FNK+W E   K Y KSLDH+   FKQ D
Sbjct: 840 IDGLKKNPVVAVPVVLRRLKSKEEEWREAQKGFNKIWREQNEKYYLKSLDHQGINFKQND 899

Query: 691 SKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLI 749
            K+L +K+L  EI+ + +++ ++ D     +   + +  PHL   Y D  + +D   L+
Sbjct: 900 VKALRSKSLFNEIETLYDERHEQVD---DGSGDGQNNSGPHLVLPYKDKSVLDDAANLL 955



 Score =  102 bits (253), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 45/74 (60%), Positives = 57/74 (77%)

Query: 41  QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDL 100
           Q+L   DAL+YL  VK  F D+ + Y+DFL++MK+FK+Q IDT GVI RV  LFKGH +L
Sbjct: 177 QRLKVEDALSYLDQVKYKFSDQPQVYNDFLDIMKEFKSQSIDTPGVITRVSHLFKGHPEL 236

Query: 101 ILGFNTFLPKGYEI 114
           I+GFNTFLP GY+I
Sbjct: 237 IVGFNTFLPPGYKI 250



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 40/67 (59%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           ++ E+A+++++++K +F     VY  FLDI+  ++ ++     V   V  LF+ HP+L+ 
Sbjct: 179 LKVEDALSYLDQVKYKFSDQPQVYNDFLDIMKEFKSQSIDTPGVITRVSHLFKGHPELIV 238

Query: 189 EFTHFLP 195
            F  FLP
Sbjct: 239 GFNTFLP 245



 Score = 43.1 bits (100), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 31/107 (28%)

Query: 26  SGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDF-KAQR---- 80
           SGQTQ         +Q +  N A+ Y+  +K+ FQ + +KY  FLE++  + K QR    
Sbjct: 368 SGQTQ--------QSQPVEFNHAINYVNKIKNRFQGQPDKYKRFLEILHTYQKEQRNLKE 419

Query: 81  ------------------IDTAGVIARVKELFKGHRDLILGFNTFLP 109
                             +  A V ++V +LF+   DL+  F  FLP
Sbjct: 420 SGHMGGTSGSGASGGAKHLTEAEVYSQVAKLFENQEDLLAEFGQFLP 466


>gi|328782542|ref|XP_003250163.1| PREDICTED: paired amphipathic helix protein Sin3b [Apis mellifera]
          Length = 1520

 Score =  263 bits (672), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 206/674 (30%), Positives = 318/674 (47%), Gaps = 114/674 (16%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI----------------- 169
           +PVEF  AIN+VNKIK RFQG    YK FL+IL+ Y+KE +++                 
Sbjct: 375 QPVEFNHAINYVNKIKNRFQGQPDKYKRFLEILHTYQKEQRNLKESGHMGGTSGSGASGG 434

Query: 170 ------TEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPT 223
                  EVY +V  LF++  DLL EF  FLPD++   S     S + + + D ++ +  
Sbjct: 435 AKHLTEAEVYSQVAKLFENQEDLLAEFGQFLPDATNQQS---ALSNKTATVNDHTTIV-- 489

Query: 224 ARQVHVDKKERAMASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERRDDHRRERE 283
            ++    K     + +  RDL                 ++       ERE RD   RERE
Sbjct: 490 -KKPLGPKAPYNNSGNISRDL-----------------RESSGINTIERETRDHRDRERE 531

Query: 284 RDDRDFENDVNRDFSMQRFPHK----RKSARKIEDSTAEPLHQGGEGDENFGMHPVSS-- 337
           RD      D+N   S+Q+  H     ++S       TA   H    G      H VSS  
Sbjct: 532 RDRSGIR-DIN---SVQKLGHNTGQLKRSPSFSPSVTAGNSHHIQHGPPPLKKHKVSSMR 587

Query: 338 -SYDDKNAMKSMFSQELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDL 394
                  A K     + +F +KV+  LR    Y+ FLRCL L+ +EI+++SEL  LV   
Sbjct: 588 ECVTIAEAGKYGSLNDYAFFDKVRKALRSQEVYENFLRCLVLFNQEIVSKSELVQLVTPF 647

Query: 395 LGRYPDLMDGFNGFLARCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDG 454
           LGR+P+L+  F  FL                      G +P+S      +   +      
Sbjct: 648 LGRFPELLRWFKDFL----------------------GHLPESSNTNTTNASSN------ 679

Query: 455 VKDRDREAREKDRLDKSVAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRL 514
                               +N +  P   + S +++       E+D + C+R   SY  
Sbjct: 680 --------------------LNVEALPNNVVRSHQERPQGDLAMEIDYTACKRLGASYCA 719

Query: 515 LPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELD 574
           LPK+Y+ P  + RT+L  EVLND WVS  + SED +F   RK QYEE ++RCED+RFELD
Sbjct: 720 LPKSYVQPKCTGRTQLCKEVLNDTWVSFPTWSEDSTFVTSRKTQYEEFIYRCEDERFELD 779

Query: 575 MLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TALNLRCIERLYGDHGLDV 630
            ++E+   T + +E + +K++  + +     +++D        ++ R ++R+YGD   D+
Sbjct: 780 GVIETNASTIRVLEGVHKKMSRMSQEELQKFKLDDCLGGCSPTIHQRALKRIYGDKAADI 839

Query: 631 MDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQD 690
           +D L+KN  +A+PV+L RLK K+EEW   +  FNK+W E   K Y KSLDH+   FKQ D
Sbjct: 840 IDGLKKNPVVAVPVVLRRLKSKEEEWREAQKGFNKIWREQNEKYYLKSLDHQGINFKQND 899

Query: 691 SKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLIK 750
            K+L +K+L  EI+ + +++ ++ D     +   + +  PHL   Y D  + +D   L+ 
Sbjct: 900 VKALRSKSLFNEIETLYDERHEQVD---DGSGDGQNNSGPHLVLPYKDKSVLDDAANLLI 956

Query: 751 YSCGEMCTTEQLDK 764
           +         + DK
Sbjct: 957 HHVKRQTAIHKEDK 970



 Score =  102 bits (253), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 45/74 (60%), Positives = 57/74 (77%)

Query: 41  QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDL 100
           Q+L   DAL+YL  VK  F D+ + Y+DFL++MK+FK+Q IDT GVI RV  LFKGH +L
Sbjct: 177 QRLKVEDALSYLDQVKYKFSDQPQVYNDFLDIMKEFKSQSIDTPGVITRVSHLFKGHPEL 236

Query: 101 ILGFNTFLPKGYEI 114
           I+GFNTFLP GY+I
Sbjct: 237 IVGFNTFLPPGYKI 250



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 40/67 (59%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           ++ E+A+++++++K +F     VY  FLDI+  ++ ++     V   V  LF+ HP+L+ 
Sbjct: 179 LKVEDALSYLDQVKYKFSDQPQVYNDFLDIMKEFKSQSIDTPGVITRVSHLFKGHPELIV 238

Query: 189 EFTHFLP 195
            F  FLP
Sbjct: 239 GFNTFLP 245



 Score = 43.1 bits (100), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 31/107 (28%)

Query: 26  SGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDF-KAQR---- 80
           SGQTQ         +Q +  N A+ Y+  +K+ FQ + +KY  FLE++  + K QR    
Sbjct: 368 SGQTQ--------QSQPVEFNHAINYVNKIKNRFQGQPDKYKRFLEILHTYQKEQRNLKE 419

Query: 81  ------------------IDTAGVIARVKELFKGHRDLILGFNTFLP 109
                             +  A V ++V +LF+   DL+  F  FLP
Sbjct: 420 SGHMGGTSGSGASGGAKHLTEAEVYSQVAKLFENQEDLLAEFGQFLP 466


>gi|383857517|ref|XP_003704251.1| PREDICTED: paired amphipathic helix protein Sin3a-like [Megachile
           rotundata]
          Length = 1520

 Score =  247 bits (631), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 210/677 (31%), Positives = 318/677 (46%), Gaps = 120/677 (17%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI----------------- 169
           +PVEF  AIN+VNKIK RFQG    YK FL+IL+ Y+KE +++                 
Sbjct: 375 QPVEFNHAINYVNKIKNRFQGQPDKYKRFLEILHTYQKEQRNLKESGHMGGTSGSGASGG 434

Query: 170 ------TEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPT 223
                  EVY +V  LF++  DLL EF  FLPD++   S     S + + + D ++ +  
Sbjct: 435 AKHLTEAEVYSQVAKLFENQEDLLAEFGQFLPDATNQQSSL---SNKTATVNDHTTIV-- 489

Query: 224 ARQVHVDKKERAMASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERRDDHRRERE 283
            ++    K     + +  RDL                 ++    G  ERE RD   RERE
Sbjct: 490 -KKPLGPKAPYNNSGNISRDL-----------------RESSGTGTIERESRDHRDRERE 531

Query: 284 RDDRDFENDVNRDFSMQRFPHK----RKSARKIEDSTAEPLHQGGEGDENFGMHPVSS-- 337
           RD      D+N   S+Q+F H     ++S       TA   H    G      H VSS  
Sbjct: 532 RDRSGIR-DIN---SVQKFSHSTGQLKRSPSFSPSVTAGNSHHIQHGPPPLKKHKVSSMR 587

Query: 338 -SYDDKNAMKSMFSQELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDL 394
                  A K     + +F +KV+  LR    Y+ FLRCL L+ +EI+++SEL  LV   
Sbjct: 588 ECVTIAEAGKYGSLNDYAFFDKVRKALRSQEVYENFLRCLVLFNQEIVSKSELVQLVTPF 647

Query: 395 LGRYPDLMDGFNGFLARCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDG 454
           LGR+P+L+  F  FL      E    +  +  S  N   +P +V        ++R + D 
Sbjct: 648 LGRFPELLRWFKDFLGHL--PESSNTNTTNTGSNLNVEALPNNVV----RSHQERPQGDL 701

Query: 455 VKDRDREAREKDRLDKSVAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRL 514
             + D  A +  RL  S                    Y A P                  
Sbjct: 702 AMEIDYTACK--RLGAS--------------------YCALP------------------ 721

Query: 515 LPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELD 574
             K+Y+ P  + RT+L  EVLND WVS  + SED +F   RK QYEE ++RCED+RFELD
Sbjct: 722 --KSYVQPKCTGRTQLCKEVLNDTWVSFPTWSEDSTFVTSRKTQYEEFIYRCEDERFELD 779

Query: 575 MLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TALNLRCIERLYGDHGLDV 630
            ++E+   T + +E + +K++  + +     +++D        ++ R ++R+YGD   D+
Sbjct: 780 GVIETNASTIRVLEGVHKKMSRMSQEELQKFKLDDCLGGCSPTIHQRALKRIYGDKAADI 839

Query: 631 MDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQD 690
           +D L+KN  +A+PV+L RLK K+EEW   +  FNK+W E   K Y KSLDH+   FKQ D
Sbjct: 840 IDGLKKNPVVAVPVVLRRLKSKEEEWREAQKGFNKIWREQNEKYYLKSLDHQGINFKQND 899

Query: 691 SKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGN---RRSIVPHLEFEYSDPDIHEDLYQ 747
            K+L +K+L  EI+ + +++ ++      +  GN   + +  PHL   Y D  + +D   
Sbjct: 900 VKALRSKSLFNEIETLYDERHEQ------VNDGNGDGQNNSDPHLILPYKDKSVLDDAAN 953

Query: 748 LIKYSCGEMCTTEQLDK 764
           L+ +         + DK
Sbjct: 954 LLIHHVKRQTAIHKEDK 970



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 44/74 (59%), Positives = 57/74 (77%)

Query: 41  QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDL 100
           Q+L   DAL+YL  VK  F D+ + Y+DFL++MK+FK+Q IDT GVI RV  LF+GH +L
Sbjct: 177 QRLKVEDALSYLDQVKYKFSDQPQVYNDFLDIMKEFKSQSIDTPGVITRVSRLFQGHPEL 236

Query: 101 ILGFNTFLPKGYEI 114
           I+GFNTFLP GY+I
Sbjct: 237 IVGFNTFLPPGYKI 250



 Score = 53.1 bits (126), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 40/67 (59%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           ++ E+A+++++++K +F     VY  FLDI+  ++ ++     V   V  LFQ HP+L+ 
Sbjct: 179 LKVEDALSYLDQVKYKFSDQPQVYNDFLDIMKEFKSQSIDTPGVITRVSRLFQGHPELIV 238

Query: 189 EFTHFLP 195
            F  FLP
Sbjct: 239 GFNTFLP 245



 Score = 45.8 bits (107), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 31/108 (28%)

Query: 25  PSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDF-KAQR--- 80
           PSGQTQ         +Q +  N A+ Y+  +K+ FQ + +KY  FLE++  + K QR   
Sbjct: 367 PSGQTQ--------QSQPVEFNHAINYVNKIKNRFQGQPDKYKRFLEILHTYQKEQRNLK 418

Query: 81  -------------------IDTAGVIARVKELFKGHRDLILGFNTFLP 109
                              +  A V ++V +LF+   DL+  F  FLP
Sbjct: 419 ESGHMGGTSGSGASGGAKHLTEAEVYSQVAKLFENQEDLLAEFGQFLP 466


>gi|170036537|ref|XP_001846120.1| sin3b [Culex quinquefasciatus]
 gi|167879188|gb|EDS42571.1| sin3b [Culex quinquefasciatus]
          Length = 1748

 Score =  245 bits (625), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 200/670 (29%), Positives = 298/670 (44%), Gaps = 117/670 (17%)

Query: 125  PKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENK----------------- 167
            P +PVEF  AI +VNKIK RF      YK FL+IL+ Y+KE K                 
Sbjct: 458  PNQPVEFNHAITYVNKIKNRFHSQPEKYKRFLEILHTYQKEQKIYKEGPQGGCNAGAKQL 517

Query: 168  SITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAA--SIHYVPSGRNSILRDRSSAMPTAR 225
            +  EVY +V  LF +  DLL EF  FLPD++  A  S+H   + +N  L ++SS  P   
Sbjct: 518  TEAEVYTQVAKLFDNQEDLLREFGQFLPDATSHAPSSLHAGGANKNHTLHEQSSQPPVPP 577

Query: 226  QVHVDKKERAMASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERRDDHRRERERD 285
            Q H  K    M+        V   +  H   L +  +    + EK+              
Sbjct: 578  QPHSKK----MSGSVMNASGVKAFNSSHAANLSRLQERDYGQSEKDFASGGPGAGGGRGS 633

Query: 286  DRDFENDVNRDFSMQRFPHKRKS----------ARKIEDSTAEPLHQGG--------EGD 327
            +   E +     S Q++ H   +          A K   S       GG        EG 
Sbjct: 634  NAGIEKEPRNHVSNQKYAHNAAAMQGSGLGGGNATKRSPSYQSVAPMGGHGMPPREREGP 693

Query: 328  ENFGMHPVSSSYDDKNAMKSMFSQELSFCEKVKDKLR--DDYQEFLRCLHLYTKEIITRS 385
                  P         A K     + +F +KV+  LR  D Y+ FLRCL L+ +EI+++S
Sbjct: 694  PTKRYKPTCRDITIAEASKFGTLNDYAFFDKVRKALRSPDVYENFLRCLTLFNQEIVSKS 753

Query: 386  ELQSLVGDLLGRYPDLMDGFNGFLARCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDR 445
            ELQ+LV                FL+R     +   D +   +   E  +P +        
Sbjct: 754  ELQTLV--------------TPFLSRFPDLLKWFQDFLGPPTATTEC-VPLA-------- 790

Query: 446  DRDRERDDGVKDRDREAREKDRLDKSVAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNC 505
                            A+ +DR    +A                         ++DLS C
Sbjct: 791  ---------------SAQRQDRSQSEIA------------------------TDIDLSTC 811

Query: 506  ERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFR 565
            +R   SY  LPK++     S RT L  +VLND WVS  + +ED +F   RK QYEE ++R
Sbjct: 812  KRLGASYCALPKSHENVKCSGRTSLCKDVLNDTWVSFPTWAEDSTFVTSRKTQYEEFIYR 871

Query: 566  CEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TALNLRCIER 621
            CED+RFELD+++E+ + T + +E + +K++  +       R+++        ++ R + R
Sbjct: 872  CEDERFELDVVIETNSATIRVLEGVQKKLSRMSPDEVSRFRLDECLGGTSPTIHQRALRR 931

Query: 622  LYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDH 681
            +YGD   D++  L+KN  +A+PV+L RLK K+EEW   +  FNK W E   K Y KSLDH
Sbjct: 932  IYGDKAADIIQGLKKNPVVAVPVVLRRLKTKEEEWREAQKGFNKQWREQNEKYYLKSLDH 991

Query: 682  RSFYFKQQDSKSLGAKALSAEIKEISEKK--RKEDDVLLAIAAGNRRSIVPHLEFEYSDP 739
            +   FKQ D KSL +K+L  EI+ + +++  + ED V   + +G      PHL   Y D 
Sbjct: 992  QGINFKQNDIKSLRSKSLFNEIETLLDERHEQHEDGVTNPLISG------PHLVLPYKDK 1045

Query: 740  DIHEDLYQLI 749
             I +D   L+
Sbjct: 1046 TILDDAANLL 1055



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 44/80 (55%), Positives = 59/80 (73%)

Query: 42  KLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLI 101
           +L   DAL+YL  VK  F ++ + Y+DFL++MK+FK+Q IDT GVI RV  LFKGH +LI
Sbjct: 197 RLKVEDALSYLDQVKFRFGNQPQVYNDFLDIMKEFKSQSIDTPGVIQRVSNLFKGHPELI 256

Query: 102 LGFNTFLPKGYEITLPLEDE 121
           +GFNTFLP GY+I +   D+
Sbjct: 257 VGFNTFLPPGYKIEVQANDQ 276



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 41/67 (61%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           ++ E+A+++++++K RF     VY  FLDI+  ++ ++     V Q V  LF+ HP+L+ 
Sbjct: 198 LKVEDALSYLDQVKFRFGNQPQVYNDFLDIMKEFKSQSIDTPGVIQRVSNLFKGHPELIV 257

Query: 189 EFTHFLP 195
            F  FLP
Sbjct: 258 GFNTFLP 264



 Score = 48.9 bits (115), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 17/93 (18%)

Query: 34  GGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFK---------------- 77
           GGG    Q +  N A+ Y+  +K+ F  + EKY  FLE++  ++                
Sbjct: 453 GGGATPNQPVEFNHAITYVNKIKNRFHSQPEKYKRFLEILHTYQKEQKIYKEGPQGGCNA 512

Query: 78  -AQRIDTAGVIARVKELFKGHRDLILGFNTFLP 109
            A+++  A V  +V +LF    DL+  F  FLP
Sbjct: 513 GAKQLTEAEVYTQVAKLFDNQEDLLREFGQFLP 545


>gi|198423440|ref|XP_002123710.1| PREDICTED: similar to transcriptional regulator, SIN3A [Ciona
           intestinalis]
          Length = 1312

 Score =  239 bits (610), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 184/644 (28%), Positives = 294/644 (45%), Gaps = 146/644 (22%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI-------------TEVY 173
           +PVEF  AIN+VNKIK RFQG   +YK+FL+IL+ Y+KE +++             +EVY
Sbjct: 349 QPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHKYQKEQRNVKDSNGSYVPLLSESEVY 408

Query: 174 QEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQVHVDKKE 233
            +V  LFQ+  DLL EF  FLPD+ GA                  + MP +   H   + 
Sbjct: 409 AQVARLFQNDSDLLREFGQFLPDAGGAV----------------GAVMPQSL-THAASQS 451

Query: 234 RAMASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERRDDHRRERERDDRDFENDV 293
             + S + +   VD    DH   +        ++  +       HR   +   R  + + 
Sbjct: 452 SGIPSPSTK---VDGIMNDHGSTV--------KKPPQSTSSSKPHRSGHQSSKRPSQTNT 500

Query: 294 NRDFSMQRFPHKRKSARKIED-STAEPLHQGGEGDENFGMHPVSSSYDDKNAMKSMFSQE 352
           +   S      KR  +  ++D S AE    G  G                         E
Sbjct: 501 HGQGS------KRPKSCSLKDVSLAEASKHGTLG-------------------------E 529

Query: 353 LSFCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLA 410
            +F +KV+  LR  D Y+ FLRCL LY  E++ R+E+  LV   L ++P+L   F  FL 
Sbjct: 530 FAFFDKVRRALRSSDAYENFLRCLLLYNNEVVGRAEIVQLVQPFLMKFPELFKWFKEFLG 589

Query: 411 RCEKSEEL-LADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRLD 469
            C+ +  + + D +S          P+ +K          E+ +G+      A E D   
Sbjct: 590 -CKDNPSIEMGDEISS---------PQPIK----------EKHEGI------AMEID--- 620

Query: 470 KSVAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTE 529
                                            +  +R   SYR LP ++  P+ + R +
Sbjct: 621 --------------------------------YTTLKRLGSSYRALPSSFQQPTCTGRDD 648

Query: 530 LGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEE 589
           L  EVLND WVS  S SED  F   +K  +EE ++RCED+R+ELD+++E+     + +E 
Sbjct: 649 LCHEVLNDTWVSFPSWSEDSQFVTSKKTPFEEHIYRCEDERYELDVVIETNLGAIRCLEG 708

Query: 590 LLEKINNNTIKTDGPIRVEDHFTALN----LRCIERLYGDHGLDVMDVLRKNASLALPVI 645
           + +K++  + +      ++++    +     + I R+YGD   DV++ L+KN ++A+P++
Sbjct: 709 INKKLSRMSEEDKAKFHLDNYLGGTSEVTQRKAIHRIYGDKAPDVIEGLKKNPAVAVPLV 768

Query: 646 LTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKE 705
           L RLK K +EW   +  FNKVW     K Y KSLDH+   FK  D++ L  K+L  EI+ 
Sbjct: 769 LKRLKMKDDEWREAQHSFNKVWRNQNEKYYLKSLDHQGITFKANDTRFLRWKSLINEIET 828

Query: 706 ISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLI 749
           + +++++  +     A G   +  PH+  +Y D  I +D   LI
Sbjct: 829 LYDERQEAVE-----AGGATIASGPHITLKYEDKSIMDDAASLI 867



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 54/114 (47%), Positives = 70/114 (61%), Gaps = 4/114 (3%)

Query: 12  SQIKRPMISSRGEP----SGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYD 67
           +Q+    + S G+P    S QT           QKL   DAL+YL  VK  F ++ + Y 
Sbjct: 120 TQVLAANLVSHGQPPLSQSPQTASQLQAQQHQFQKLKVEDALSYLDQVKFQFGNQPQVYT 179

Query: 68  DFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLEDE 121
           DFL++MK+FK+Q IDT GVIARV  LF GH DLI+GFNTFLP GY+I +   D+
Sbjct: 180 DFLDIMKEFKSQSIDTPGVIARVSHLFNGHPDLIVGFNTFLPPGYKIEVSANDQ 233



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 39/67 (58%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           ++ E+A+++++++K +F     VY  FLDI+  ++ ++     V   V  LF  HPDL+ 
Sbjct: 155 LKVEDALSYLDQVKFQFGNQPQVYTDFLDIMKEFKSQSIDTPGVIARVSHLFNGHPDLIV 214

Query: 189 EFTHFLP 195
            F  FLP
Sbjct: 215 GFNTFLP 221


>gi|299740042|ref|XP_001840433.2| sin3b [Coprinopsis cinerea okayama7#130]
 gi|298404059|gb|EAU81489.2| sin3b [Coprinopsis cinerea okayama7#130]
          Length = 1588

 Score =  237 bits (605), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 209/722 (28%), Positives = 326/722 (45%), Gaps = 147/722 (20%)

Query: 34   GGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKEL 93
            G  G   + L   DAL YL  VK  F D+ + Y+ FL++MK+FK ++IDT GVI RV +L
Sbjct: 482  GYPGSSDRPLNVTDALTYLDQVKVQFADQPDVYNQFLDIMKEFKNEQIDTPGVIKRVSQL 541

Query: 94   FKGHRDLILGFNTFLPKGYEITL---PLED----------------------EQPPPKKP 128
            F GH  LI GFNTFLP GY I      LE                          P   P
Sbjct: 542  FHGHPSLIQGFNTFLPAGYRIECMGDALETGVITVTTPTGTTIQTTQNSRMVWTTPDGVP 601

Query: 129  VE---FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI--TEVYQEVEALFQDH 183
            ++    E A+ +V KIK     D   Y+ FLDIL+ Y    ++I   EV +++  LF+D 
Sbjct: 602  LDGQAIEPAVQYVQKIKQ--SCDAETYRQFLDILSRYHHAPEAIDEAEVSRQISRLFKDA 659

Query: 184  PDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQV-HVDKKERAMASHADR 242
            P+L  +F  F+PD S              IL       P + QV H+D K R        
Sbjct: 660  PELANDFRVFMPDRS------------QQILDG-----PASHQVSHLDSKGRRKLDAVAD 702

Query: 243  DLSVDRPDPDHDRVLLKSDKDQRRRGEKERERRDDHRRERERDDRDFENDVNRDFSMQRF 302
             LS +       R        +R+ G+KERER  +    R               S    
Sbjct: 703  SLSANGAGLPQKR--------KRKVGDKEREREKEAVPLR---------------SSAVI 739

Query: 303  PHKRKSARKIEDSTAEPLHQGGEGDENFGMHPVSSSYDDKNAM---KSMFSQELSFCEKV 359
            P   K  +  +D+     +      +    HP  S    + AM   ++    + +F ++V
Sbjct: 740  PPASKKLKHSQDANTVSYNPKHIIAQTSSPHPGPSQLLPQPAMSHTRTAMPDDSNFFDRV 799

Query: 360  KDKL---RDDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLARCEKS- 415
            K  L   RD Y EFL+ ++L+T++ I  + L     + LG   +L   F   L   ++  
Sbjct: 800  KRALDNNRDLYNEFLKLVNLFTQDYIDMARLVKESRNFLGDT-ELHRQFKEILGWDDRKQ 858

Query: 416  -EELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRLDKSVAF 474
             E ++A+ +S  + W++   P  + VE        E+   +   +R+             
Sbjct: 859  REYVMAEHVSASADWHK---PTVMSVE--------EKPTRIHQAERQ------------- 894

Query: 475  VNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEV 534
                                        S+  R +P+   +P        S R E+   V
Sbjct: 895  ----------------------------SSYRRVSPAEANVP-------CSGRDEMCRMV 919

Query: 535  LNDHWVSVTS-GSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEK 593
            LND WVS  +  SED  F   +KN YEE+L R E++R E D  +E++  T   +E +  K
Sbjct: 920  LNDEWVSHPAWSSEDTGFIPHKKNVYEEALHRSEEERHEYDFHIEAITRTIAMLEPINNK 979

Query: 594  INNNTIKTDGPIRVEDH----FTALNLRCIERLY-GDHGLDVMDVLRKNASLALPVILTR 648
            I     +  G  +++ +    + A++ R I+++Y GD GL+V+  ++ + +LA+PV+L R
Sbjct: 980  IAQMNPEDRGSFKLKPNLGGTWKAIHQRVIKKIYGGDAGLEVIQSMQDSPALAIPVVLQR 1039

Query: 649  LKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISE 708
            LKQK+EEW R + ++NKVW E+ ++NY KSLDH++  FK  D K++  KA  ++I+   E
Sbjct: 1040 LKQKEEEWKRAQREWNKVWREVDARNYAKSLDHQAITFKAADKKAITTKAFVSQIEAARE 1099

Query: 709  KK 710
            ++
Sbjct: 1100 EQ 1101



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 15/91 (16%)

Query: 120 DEQPPPKK---------------PVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRK 164
           DE PPP+K               P+   +A+ +++++K +F     VY  FLDI+  ++ 
Sbjct: 467 DEPPPPRKGSPADAHGYPGSSDRPLNVTDALTYLDQVKVQFADQPDVYNQFLDIMKEFKN 526

Query: 165 ENKSITEVYQEVEALFQDHPDLLEEFTHFLP 195
           E      V + V  LF  HP L++ F  FLP
Sbjct: 527 EQIDTPGVIKRVSQLFHGHPSLIQGFNTFLP 557


>gi|348685597|gb|EGZ25412.1| hypothetical protein PHYSODRAFT_297076 [Phytophthora sojae]
          Length = 1632

 Score =  237 bits (605), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 129/342 (37%), Positives = 180/342 (52%), Gaps = 60/342 (17%)

Query: 496  PIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMR 555
            P+ E DLS C R TPSYR LP +Y IP  S R+ L  +V ND WVSV +GSED+SFK MR
Sbjct: 702  PLAETDLSQCRRATPSYRGLPASYPIPPCSHRSALEKQVCNDSWVSVPTGSEDFSFKSMR 761

Query: 556  KNQYEESLFRCEDDRFELDMLLESVNVTTKRVE------ELLEKINNNTIKTDGPIRVED 609
            KNQYEE+LF+CED+RFE+DM++E+   T   +E      E+L+K N +  K    +  + 
Sbjct: 762  KNQYEEALFKCEDERFEIDMVIEANASTISVLEPLAHEIEVLKKSNGDDDKMWNYVVDKG 821

Query: 610  HFTALNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAE 669
             F   +L  I R+YGD G +++D+LRK  + A+PVIL RLKQK EEW R R D N+ W E
Sbjct: 822  TFRVTHLNAITRIYGDAGTEILDLLRKYPAGAIPVILKRLKQKDEEWRRAREDLNRQWKE 881

Query: 670  IYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIK------------------------- 704
            +  KNYHKSLDH SFYFKQ+D K    K +  E K                         
Sbjct: 882  VNEKNYHKSLDHSSFYFKQKDKKQTSMKMMMQEAKKKLEADEKRIEEAKTTESSASPSTV 941

Query: 705  ----------------EISEKKRKEDDVLLA--------IAAGNRRSIV-----PHLEFE 735
                            +I++  RKE     A        +AA   + +      PH  ++
Sbjct: 942  SATAEVVSAKAPPQASDIADALRKEQSSAAAKIPAADGKVAAALSQPVSSGKWKPHFVYK 1001

Query: 736  YSDPDIHEDLYQLIKYSCGEMCTTEQLDKVMKIWTTFLEPML 777
            ++   IH++ + L+ Y+  +  +    +K+ K+W  F  P  
Sbjct: 1002 FASVQIHKEAFGLLSYAAEKNLSVADKEKISKVWQAFFFPFF 1043



 Score =  117 bits (294), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 92/297 (30%), Positives = 148/297 (49%), Gaps = 44/297 (14%)

Query: 128 PVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLL 187
           PVEF+ AI++V  IK RF  +   YK FL IL+ Y+KE +SI +V  +V  LF+DHPDLL
Sbjct: 418 PVEFDHAIHYVTTIKQRFADEPETYKEFLAILHTYQKEQRSIRQVLDQVSHLFRDHPDLL 477

Query: 188 EEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQVHVDKKERAMAS------HAD 241
            EFT FLPD+    +   +         +R++     R+  + +K R   +       +D
Sbjct: 478 REFTFFLPDAVQEQAKERL---------NRAAEKAQQRKDQMAQKARKYGTSSQGYQQSD 528

Query: 242 R--DLSVDRPDP---DHDRVLLKSDKDQRRRGEKERER--RDDHRRERERDDRDFENDVN 294
           R  D   D P        R++++ +    + G+K   R  +DD  R   +     E +  
Sbjct: 529 RRDDRGADSPSSAAMKGGRMMVEDEDAYMKYGKKGSGRGYKDDDHRLSGKALERREKERE 588

Query: 295 RDFSMQRFPHKRKSARKIEDSTAEPLHQGGEGDENFGMHPVSSSYDDKNAMKSMFSQELS 354
           R+ +  +F HKR   R              +G E      +S    DK        +E +
Sbjct: 589 RERNRAQFNHKRAKRRPY------------DGKERRAYLAISDVLLDK--------EEWN 628

Query: 355 FCEKVKDKL--RDDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFL 409
             EK+K  L  RD+++EFL+CL LY++E++ R+E+ SL+ +L GR+ +L++ F+  L
Sbjct: 629 IFEKIKKILPSRDNWREFLKCLELYSQEVLDRNEMLSLIRNLFGRHTELVEEFDHLL 685



 Score = 96.3 bits (238), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 45/72 (62%), Positives = 52/72 (72%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
           L   DAL YL  VK  F D+ + Y+ FL+VMKDFKAQ IDT GVI RV  LF+G+ +LIL
Sbjct: 245 LRVEDALLYLDQVKQQFGDQPDIYNQFLDVMKDFKAQAIDTPGVILRVSTLFRGYPNLIL 304

Query: 103 GFNTFLPKGYEI 114
           GFNTFLP GY I
Sbjct: 305 GFNTFLPPGYRI 316



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 56/115 (48%), Gaps = 18/115 (15%)

Query: 13  QIKRPMISSRGE--PSGQTQVVG-----------GGGGGGAQKLTTND-----ALAYLKA 54
           ++ +P  SSR +  P+GQ +  G             GG  A + +TN      A+ Y+  
Sbjct: 371 ELHKPTPSSRQQLAPAGQMKAGGKPKKQQQQAPTPSGGNAAARSSTNPVEFDHAIHYVTT 430

Query: 55  VKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLP 109
           +K  F D+ E Y +FL ++  ++ ++     V+ +V  LF+ H DL+  F  FLP
Sbjct: 431 IKQRFADEPETYKEFLAILHTYQKEQRSIRQVLDQVSHLFRDHPDLLREFTFFLP 485



 Score = 48.5 bits (114), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 28/106 (26%), Positives = 53/106 (50%), Gaps = 7/106 (6%)

Query: 123 PPPK-KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQ 181
           PPP+ + +  E+A+ +++++K +F     +Y  FLD++  ++ +      V   V  LF+
Sbjct: 238 PPPRHRELRVEDALLYLDQVKQQFGDQPDIYNQFLDVMKDFKAQAIDTPGVILRVSTLFR 297

Query: 182 DHPDLLEEFTHFLPDSSGA---ASIHYVPS---GRNSILRDRSSAM 221
            +P+L+  F  FLP         SI  +PS   GR  + +   S +
Sbjct: 298 GYPNLILGFNTFLPPGYRIRPDTSIEVIPSQMGGRGGVQQSMYSGV 343


>gi|301111330|ref|XP_002904744.1| paired amphipathic helix protein Sin3, putative [Phytophthora
            infestans T30-4]
 gi|262095074|gb|EEY53126.1| paired amphipathic helix protein Sin3, putative [Phytophthora
            infestans T30-4]
          Length = 1578

 Score =  232 bits (592), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 125/339 (36%), Positives = 179/339 (52%), Gaps = 57/339 (16%)

Query: 496  PIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMR 555
            P+ E DLS C R TPSYR LP +Y IP  S R+ L  EV ND WVSV +GSED+SFK MR
Sbjct: 700  PLAETDLSQCRRATPSYRGLPASYPIPPCSHRSALEKEVCNDSWVSVPTGSEDFSFKSMR 759

Query: 556  KNQYEESLFRCEDDRFELDMLLESVNVTTKRVE------ELLEKINNNTIKTDGPIRVED 609
            KNQYEE+LF+CED+RFE+DM++E+   T   +E      E+L+K + +  K    +  + 
Sbjct: 760  KNQYEEALFKCEDERFEIDMVIEANASTISILEPLAQEIEVLKKSSGDDDKLWNYVVDKG 819

Query: 610  HFTALNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAE 669
             F   +L  I R+YG+ G  ++++LRK  + A+P+IL RLKQK EEW R R D N+ W E
Sbjct: 820  TFRVTHLNAITRIYGEAGSQILELLRKYPAGAIPIILKRLKQKDEEWRRAREDLNRQWKE 879

Query: 670  IYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIK------------------------- 704
            +  KNYHKSLDH SFYFKQ+D K  G K +  E K                         
Sbjct: 880  VNEKNYHKSLDHSSFYFKQKDKKQTGMKMMMQEAKKKLEADEKRAEEAKTDSNASPSTVS 939

Query: 705  ---------------EISEKKRKED-----------DVLLAIAAGNRRSIVPHLEFEYSD 738
                           +I++  +KE            D  +A  + +     PH  ++++ 
Sbjct: 940  ATSAVVGAKAPPQASDIADALKKEQSLDAAKPPITADSKIAATSSHPMKWKPHFAYKFAS 999

Query: 739  PDIHEDLYQLIKYSCGEMCTTEQLDKVMKIWTTFLEPML 777
              IH++ + L+ Y+  +       +K+ K+W +F  P  
Sbjct: 1000 VQIHKEAFGLLSYAAEKNLGGADKEKISKVWQSFFFPFF 1038



 Score = 96.3 bits (238), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 45/72 (62%), Positives = 52/72 (72%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
           L   DAL YL  VK  F D+ + Y+ FL+VMKDFKAQ IDT GVI RV  LF+G+ +LIL
Sbjct: 245 LRVEDALLYLDQVKQQFGDQPDIYNQFLDVMKDFKAQAIDTPGVILRVSTLFRGYPNLIL 304

Query: 103 GFNTFLPKGYEI 114
           GFNTFLP GY I
Sbjct: 305 GFNTFLPPGYRI 316



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 39/70 (55%), Positives = 50/70 (71%)

Query: 128 PVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLL 187
           PVEF+ AI++V  IK RF  +   YK FL IL+ Y+KE +SI +V  +V  LF+DHPDLL
Sbjct: 418 PVEFDHAIHYVTTIKQRFADEPETYKEFLAILHTYQKEQRSIRQVLDQVSHLFRDHPDLL 477

Query: 188 EEFTHFLPDS 197
            EFT FLPD+
Sbjct: 478 REFTFFLPDA 487



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 55/112 (49%), Gaps = 11/112 (9%)

Query: 4   SRDEVYMNSQIKRPMISSRGEPSGQTQVVG-GGGGGGAQKLTTND-----ALAYLKAVKD 57
           SR ++    Q+K     + G+P  Q Q      GG  A + +TN      A+ Y+  +K 
Sbjct: 379 SRQQLAPAGQMK-----TGGKPKKQQQQTPVPSGGNAAARSSTNPVEFDHAIHYVTTIKQ 433

Query: 58  IFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLP 109
            F D+ E Y +FL ++  ++ ++     V+ +V  LF+ H DL+  F  FLP
Sbjct: 434 RFADEPETYKEFLAILHTYQKEQRSIRQVLDQVSHLFRDHPDLLREFTFFLP 485



 Score = 48.9 bits (115), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 28/106 (26%), Positives = 54/106 (50%), Gaps = 7/106 (6%)

Query: 123 PPPK-KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQ 181
           PPP+ + +  E+A+ +++++K +F     +Y  FLD++  ++ +      V   V  LF+
Sbjct: 238 PPPRHRELRVEDALLYLDQVKQQFGDQPDIYNQFLDVMKDFKAQAIDTPGVILRVSTLFR 297

Query: 182 DHPDLLEEFTHFLPDSSGA---ASIHYVPS---GRNSILRDRSSAM 221
            +P+L+  F  FLP         SI  +PS   GR  + +   S++
Sbjct: 298 GYPNLILGFNTFLPPGYRIRPDTSIEVIPSQMAGRGGVQQSMYSSV 343


>gi|449018633|dbj|BAM82035.1| probable transcriptional regulator, SIN3 [Cyanidioschyzon merolae
           strain 10D]
          Length = 1551

 Score =  231 bits (590), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 132/375 (35%), Positives = 204/375 (54%), Gaps = 39/375 (10%)

Query: 352 ELSFCEKVKDKLR-DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLA 410
           EL F EK+++++    + EF++CL LY +EII R+EL SL  +L G    L + F  FL 
Sbjct: 548 ELLFFEKLRERMEAHQFHEFIKCLSLYNQEIIGRTELMSLADELFGHRHILSEAFRTFLD 607

Query: 411 RCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRLDK 470
            C  +        SK     E  +                   GV             + 
Sbjct: 608 ACAPARR------SKHPTDAESAM------------------SGV-------------EA 630

Query: 471 SVAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTEL 530
           ++A +     P  +       +  K + E    + ERC  SY+ +P  +     S R EL
Sbjct: 631 ALAILEGRAPPSATAPPVDGLWRYKSLSEAAAESRERCDTSYKRIPSEFQSMPCSGRGEL 690

Query: 531 GAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEEL 590
             +VLND WVSV +GSE+ SFKHMR+NQ+E++LFRCEDDR+ELDM++E+   T  ++E L
Sbjct: 691 EKQVLNDIWVSVPTGSEEGSFKHMRRNQFEDNLFRCEDDRYELDMVIETNAATIHKLEPL 750

Query: 591 LEKINNNTIKTDGPIRVEDH-FTALNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRL 649
              I + + +      + +H  +A++ R IER+YG HG +++  ++   S+A+P++L RL
Sbjct: 751 AMVIAHMSDEEKAKHMLAEHALSAVHYRAIERVYGAHGPEMVMHVKMQPSVAVPIVLNRL 810

Query: 650 KQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEK 709
           KQK EEW R R + NK+W EI  +NY KSLDHRSFYF+Q D +++  + L  +I +I+E 
Sbjct: 811 KQKDEEWRRARVEMNKLWREICERNYFKSLDHRSFYFRQSDKRTISVRGLLQDIHDIAEV 870

Query: 710 KRKEDDVLLAIAAGN 724
           +   + + +A+ A N
Sbjct: 871 RTLMEAITVAVFAAN 885



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 49/96 (51%), Positives = 63/96 (65%), Gaps = 7/96 (7%)

Query: 37  GGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKG 96
           G  A+ L   DALAYL+ VK  F+D+   Y  FL++MK+FKAQ IDT GVI +V  LF+G
Sbjct: 188 GSQARALRVEDALAYLEQVKAQFEDRPRIYAKFLDIMKEFKAQTIDTPGVIEQVTRLFRG 247

Query: 97  HRDLILGFNTFLPKGYEITL-------PLEDEQPPP 125
           + +L+LGFNTFLP GY+I L       P+  E P P
Sbjct: 248 YPNLVLGFNTFLPAGYKIELSDCLDAAPVHAETPGP 283



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 34/68 (50%), Positives = 46/68 (67%)

Query: 130 EFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEE 189
           EF+ AI +VNK+K RFQ    +Y+ FL+IL  Y+++ +    V  EV  +F+ HPDLLEE
Sbjct: 389 EFDHAIQYVNKVKQRFQNQPAIYQRFLNILQAYQRDGEDKFSVLDEVSQIFRGHPDLLEE 448

Query: 190 FTHFLPDS 197
           F  FLPDS
Sbjct: 449 FKSFLPDS 456



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 65/299 (21%), Positives = 120/299 (40%), Gaps = 33/299 (11%)

Query: 117 PLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEV 176
           P E E+    + +  E+A+ ++ ++K +F+    +Y  FLDI+  ++ +      V ++V
Sbjct: 182 PAETEEGSQARALRVEDALAYLEQVKAQFEDRPRIYAKFLDIMKEFKAQTIDTPGVIEQV 241

Query: 177 EALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQVHVDKKER-- 234
             LF+ +P+L+  F  FLP            +G    L D   A P   +      ER  
Sbjct: 242 TRLFRGYPNLVLGFNTFLP------------AGYKIELSDCLDAAPVHAETPGPANERDD 289

Query: 235 AMASHADRDLSVDRPDPDH-DRVLLKSDKDQRRRGEKERERRDDHRRERERDDRDFENDV 293
           A  + A  D     P P    R    +  D  R  E      + H R           + 
Sbjct: 290 AKITVAAEDTRARAPYPGAITRPSQHAVPDAYRVAEMSSAMGNAHIRAGP--------EA 341

Query: 294 NRDFSMQRFPHKRKSARKIEDSTAEPLHQGGEGDENFGMHPVSSSYDDKNAMKSMFSQEL 353
            R F   + P +    +++ D+ A+         +  G+ P  S+++++      F   +
Sbjct: 342 FRAFQPSQEPKQLHVPQRVADTVAD--SAAVVNAQAVGVPPSLSTFNNEE-----FDHAI 394

Query: 354 SFCEKVKDKLRDD---YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFL 409
            +  KVK + ++    YQ FL  L  Y ++   +  +   V  +   +PDL++ F  FL
Sbjct: 395 QYVNKVKQRFQNQPAIYQRFLNILQAYQRDGEDKFSVLDEVSQIFRGHPDLLEEFKSFL 453



 Score = 48.5 bits (114), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 6/89 (6%)

Query: 31  VVGGGGGGGAQKLTT------NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTA 84
           VV     G    L+T      + A+ Y+  VK  FQ++   Y  FL +++ ++    D  
Sbjct: 370 VVNAQAVGVPPSLSTFNNEEFDHAIQYVNKVKQRFQNQPAIYQRFLNILQAYQRDGEDKF 429

Query: 85  GVIARVKELFKGHRDLILGFNTFLPKGYE 113
            V+  V ++F+GH DL+  F +FLP   E
Sbjct: 430 SVLDEVSQIFRGHPDLLEEFKSFLPDSVE 458


>gi|29367650|gb|AAO72669.1| unknown [Oryza sativa Japonica Group]
          Length = 181

 Score =  231 bits (589), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 122/200 (61%), Positives = 146/200 (73%), Gaps = 19/200 (9%)

Query: 403 DGFNGFLARCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREA 462
           DGFN FL  CE  +  LA V SK+     GRI   VK E        ER +G K  ++E 
Sbjct: 1   DGFNEFLEHCENIDGFLAGVFSKRQT---GRI---VKTE--------ERKEGGKGTEKEP 46

Query: 463 REKDRLDKSVAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIP 522
              DR++K  A+  K+   +  ++SSK+KY+ KP+ ELDLSNC+RCTPSYRLLPK+Y +P
Sbjct: 47  ---DRIEKVPAY--KEAPSQKPVFSSKEKYIYKPVSELDLSNCQRCTPSYRLLPKHYPMP 101

Query: 523 SASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNV 582
            A  +TELGA VLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVN 
Sbjct: 102 PAGNKTELGASVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNA 161

Query: 583 TTKRVEELLEKINNNTIKTD 602
            TKRVEEL+EK+ +N++K D
Sbjct: 162 ATKRVEELIEKMQDNSLKPD 181


>gi|25272021|gb|AAN74748.1| hypothetical protein [Marchantia polymorpha]
          Length = 366

 Score =  228 bits (581), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 111/202 (54%), Positives = 146/202 (72%), Gaps = 7/202 (3%)

Query: 479 VGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDH 538
           VGP +   S K KY  KPI ELD+SNCERCT SYRLL K+Y  P  + RT+L  EVLND 
Sbjct: 170 VGPLLPT-SRKKKYSNKPISELDMSNCERCTTSYRLLTKSYPKPICTHRTDLAREVLNDS 228

Query: 539 WVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNT 598
           WVS +   E   FKH+ KN+YEE+LFRCEDD+FE D+ LES+  + +RV ELLE + + +
Sbjct: 229 WVSTSQSKE---FKHIEKNKYEENLFRCEDDQFETDVFLESIKDSIRRVTELLETLEDPS 285

Query: 599 IKTDGPIRVEDHFTALNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWAR 658
           +     +  EDH T +N RCIER+YG HGL+V+D +R+N S+ALP+IL RLKQKQ+E + 
Sbjct: 286 L---SKLNFEDHLTPINFRCIERIYGKHGLEVVDQVRRNDSVALPIILNRLKQKQDEVSS 342

Query: 659 CRSDFNKVWAEIYSKNYHKSLD 680
            R+  N+VWA++Y+KNYH SL+
Sbjct: 343 FRTKMNEVWAKVYAKNYHTSLN 364



 Score =  107 bits (266), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 59/125 (47%), Positives = 79/125 (63%), Gaps = 12/125 (9%)

Query: 132 EEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQ-----DHPDL 186
           ++ INF+NK+KTRF  D+HVYK+FL+ILNMYRK NK I+E+YQEV  LF      +H DL
Sbjct: 95  DQTINFINKVKTRFSADEHVYKAFLEILNMYRKGNKPISEMYQEVATLFSEHADGEHADL 154

Query: 187 LEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQVHVDKKERAMASHADRDLSV 246
           LEEFT F PDSSGA     +P+ R    + + S  P + ++ +   ER   S+  R L+ 
Sbjct: 155 LEEFTSFRPDSSGAPVGPLLPTSR----KKKYSNKPIS-ELDMSNCERCTTSY--RLLTK 207

Query: 247 DRPDP 251
             P P
Sbjct: 208 SYPKP 212


>gi|325187199|emb|CCA21739.1| paired amphipathic helix protein Sin3 putative [Albugo laibachii
            Nc14]
          Length = 1572

 Score =  224 bits (572), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 126/346 (36%), Positives = 182/346 (52%), Gaps = 64/346 (18%)

Query: 496  PIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMR 555
            P+ E DLS C R TPSYR LP +Y IP  S R+EL   + ND WVSV +GSED+SFK+MR
Sbjct: 771  PLAETDLSQCRRATPSYRGLPASYPIPPCSYRSELEESICNDLWVSVPTGSEDFSFKNMR 830

Query: 556  KNQYEESLFRCEDDRFELDMLLESVNVTTKRVE------ELLEKINNNTIKTDGPIRVED 609
            KNQYEE+LF+CED+RFE+DM+++    T   +E      E+L++  +   K    +   +
Sbjct: 831  KNQYEEALFKCEDERFEIDMIIDCNTSTINVLEPLARELEILKEEPDTENKLWNCVIDRN 890

Query: 610  HFTALNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAE 669
             F   +L  I R+YG+ G  ++++LRK  +  +P+IL RLKQK EEW R R D NK W E
Sbjct: 891  LFRVTHLNAISRIYGEAGTQILEMLRKYPAGTIPIILKRLKQKDEEWRRVRQDMNKQWKE 950

Query: 670  IYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIK----------------------EIS 707
            +  KNYHKSLDH SFYFKQ+D     +K L +E K                      EI 
Sbjct: 951  VNEKNYHKSLDHSSFYFKQKDKNQTSSKVLLSEAKKKLEASQERTKQVAADSVEKEGEIQ 1010

Query: 708  EKKRKEDDVLLA-------------IAAGNR----------------------RSIVPHL 732
            + +R+ D+  +A             +  GN                       R+   H 
Sbjct: 1011 QAERESDEQGVAETMIKSEASLEDDMKDGNNESKCDIKVKITSPTSLENPPPVRTSTAHF 1070

Query: 733  EFEYSDPDIHEDLYQLIKYSCGE-MCTTEQLDKVMKIWTTFLEPML 777
            ++++++  IH D Y L+ Y+  + +  +   +KV K+W +F  P  
Sbjct: 1071 QYKFTNVQIHRDAYGLLSYAAEKTLGYSTDKEKVAKVWQSFFFPFF 1116



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 44/74 (59%), Positives = 53/74 (71%)

Query: 41  QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDL 100
           ++L   DAL YL  VK  F  K + Y+ FL+VMKDFKAQ I+T GVI RV +LF+G+  L
Sbjct: 274 RELRVEDALLYLDQVKQQFNHKPDIYNQFLDVMKDFKAQAINTPGVIMRVSKLFRGYPSL 333

Query: 101 ILGFNTFLPKGYEI 114
           ILGFNTFLP GY I
Sbjct: 334 ILGFNTFLPPGYRI 347



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 38/70 (54%), Positives = 50/70 (71%)

Query: 128 PVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLL 187
           PVEF+ AI++V  IK RF  +   YK FL IL+ Y++E +SI +V  +V  LF+DHPDLL
Sbjct: 473 PVEFDHAIHYVTTIKQRFADEPETYKEFLAILHTYQREQRSIRQVLDQVSYLFRDHPDLL 532

Query: 188 EEFTHFLPDS 197
            EFT FLPD+
Sbjct: 533 REFTFFLPDA 542



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 42/61 (68%), Gaps = 2/61 (3%)

Query: 352 ELSFCEKVKDKL--RDDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFL 409
           E    E++K  L  R++++EFL+CL LY++E++ R+E+ SLV +L GR+ DL+  F+  L
Sbjct: 695 EWHLFERIKRILPSRENWREFLKCLELYSQEVLDRNEMLSLVKNLFGRHTDLVQEFDRML 754

Query: 410 A 410
            
Sbjct: 755 C 755



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/83 (28%), Positives = 42/83 (50%)

Query: 27  GQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGV 86
           G T +  G   G    +  + A+ Y+  +K  F D+ E Y +FL ++  ++ ++     V
Sbjct: 458 GNTHIATGNLHGSTNPVEFDHAIHYVTTIKQRFADEPETYKEFLAILHTYQREQRSIRQV 517

Query: 87  IARVKELFKGHRDLILGFNTFLP 109
           + +V  LF+ H DL+  F  FLP
Sbjct: 518 LDQVSYLFRDHPDLLREFTFFLP 540



 Score = 45.1 bits (105), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 24/106 (22%), Positives = 48/106 (45%), Gaps = 22/106 (20%)

Query: 112 YEITLPLED--EQPPP--------------------KKPVEFEEAINFVNKIKTRFQGDD 149
           Y +T P+ +    PPP                    ++ +  E+A+ +++++K +F    
Sbjct: 237 YNLTAPMNNTSSSPPPISQHQQASNPSTSMNSVDNSRRELRVEDALLYLDQVKQQFNHKP 296

Query: 150 HVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLP 195
            +Y  FLD++  ++ +  +   V   V  LF+ +P L+  F  FLP
Sbjct: 297 DIYNQFLDVMKDFKAQAINTPGVIMRVSKLFRGYPSLILGFNTFLP 342


>gi|414877957|tpg|DAA55088.1| TPA: hypothetical protein ZEAMMB73_922770 [Zea mays]
          Length = 493

 Score =  223 bits (568), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 140/298 (46%), Positives = 187/298 (62%), Gaps = 29/298 (9%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
           LT  DALAY+KAVKD FQ+KR  Y+ FL+VM+DFK+ R+D+AG+IARVK LF G+ DL+L
Sbjct: 25  LTARDALAYIKAVKDNFQEKRHTYEQFLQVMRDFKSNRLDSAGLIARVKTLFHGYPDLVL 84

Query: 103 GFNTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMY 162
           G N FLPKG+ I      E    K+PV++  AIN VN+IK RFQ ++HVYKSFL IL+MY
Sbjct: 85  GINAFLPKGHAIRPQDLSED---KEPVDYPRAINLVNRIKIRFQQEEHVYKSFLGILSMY 141

Query: 163 RKENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILR--DRSSA 220
           R +NK I +VY EV  LF  HPDLLEEFTHFLPD+     I    +G  S +R  D+++ 
Sbjct: 142 RMDNKPIQDVYDEVTLLFHGHPDLLEEFTHFLPDT----PIPPPEAGTTSKVRNDDKNAI 197

Query: 221 MPTARQVHVDKKERAMASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERRDDHRR 280
             +A +    + ERA+ S AD D SVDR D +HD      +KD+ R    + + R D++R
Sbjct: 198 THSAMRAQTVQSERALPSAADSDSSVDRLDLEHDIQKECIEKDKVRNACHD-QHRGDYKR 256

Query: 281 ERERDDRDFEN-DVNRDFSMQRFPHKRKSARKIEDSTAEPLHQGGEGDENFGMHPVSS 337
            R  D  ++EN D++   + Q  P   KS RK+E          G GD+  G+  +SS
Sbjct: 257 NRMND--EYENEDLD---AEQSGP---KSQRKVE----------GTGDDTPGVVTMSS 296



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/57 (52%), Positives = 41/57 (71%), Gaps = 2/57 (3%)

Query: 464 EKDRLDKSVAFVNKD-VGPKMSMYSSKDKY-LAKPIQELDLSNCERCTPSYRLLPKN 518
           E+ + ++ + F +K+    + S + SK+KY L KPI ELDLSNC+ CTPSYRLLPKN
Sbjct: 436 ERGKSERVLTFNSKEGAAHEASTFPSKEKYNLCKPISELDLSNCQWCTPSYRLLPKN 492



 Score = 40.0 bits (92), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 18/122 (14%)

Query: 216 DRSSAMPTARQVHVDKKERAMASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERR 275
           ++++ M +A +    ++ERA+ S AD D SVDR D +HD      +KD+ R     + RR
Sbjct: 316 NKNAIMHSAMRAQTVQRERALLSAADSDSSVDRLDLEHDIRKGCIEKDKVRNACHGQHRR 375

Query: 276 DDHRRERERDDRDFENDVNRDFSMQRFPHKRKSARKIEDSTAEPLHQGGEGDENFGMHPV 335
            D++R R+ D  ++EN+   D   +R     KS RK+E          G GD++ G+  +
Sbjct: 376 -DYKRNRKND--EYENE---DLDAER--SGPKSQRKVE----------GTGDDSPGIAAM 417

Query: 336 SS 337
           SS
Sbjct: 418 SS 419


>gi|330803632|ref|XP_003289808.1| hypothetical protein DICPUDRAFT_154266 [Dictyostelium purpureum]
 gi|325080119|gb|EGC33689.1| hypothetical protein DICPUDRAFT_154266 [Dictyostelium purpureum]
          Length = 1554

 Score =  222 bits (565), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 148/428 (34%), Positives = 227/428 (53%), Gaps = 84/428 (19%)

Query: 351  QELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGD-LLGRYPDLMDGFNG 407
            +EL F  KV+  + ++  Y EFL+CL+L++++IITR+EL  LV D LL R P L +    
Sbjct: 747  EELDFFHKVRTGVPNNRLYLEFLKCLNLFSQDIITRTELVLLVKDILLPRLPALFE---- 802

Query: 408  FLARCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDR 467
                                 W +  I                   GV D+  E  E+  
Sbjct: 803  ---------------------WFKTFI-------------------GVDDQSLEQLER-- 820

Query: 468  LDKSVAFVNKDVGP-KMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQ 526
                    N+ + P K + +S           E+D S C+R  PSYR LP+NY I   + 
Sbjct: 821  --------NEQLSPSKQNAWS-----------EIDFSTCKRLGPSYRALPRNYPIQKCTG 861

Query: 527  RTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKR 586
            R+E+   VLND WVS  +GSED+ FK  RKNQ+EE LF+CED+RFELD+++E +N +T R
Sbjct: 862  RSEMAESVLNDVWVSFPTGSEDFGFKSQRKNQFEEILFKCEDERFELDLIVE-MNASTIR 920

Query: 587  VEELLEKINNNTIKTDGPIRVEDHFTALNL-----RCIERLYGDHGLDVMDVLRKNASLA 641
            V   L+ I N+ I+   P     +F   NL     R IERLY   G++++  L  N  ++
Sbjct: 921  V---LDPILNSLIEM--PDNERHNFRMPNLDILHHRSIERLYSSKGMEIITALYNNPWVS 975

Query: 642  LPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSA 701
            LPVIL RLKQK +EW + + ++NKVW +   KNY++SLD++S  FKQ + K+L  K L A
Sbjct: 976  LPVILKRLKQKDQEWRKAKREWNKVWKDTTEKNYYRSLDYQSTSFKQSEKKTLTPKVLLA 1035

Query: 702  EIKEISEKKRKEDDVLLAIAAGNRRSIVP----HLEFEYSDPDIHEDLYQLIKYSCGEMC 757
            EI++   +K +E + ++A   G + ++      HL +   D  +  ++  LI ++  ++ 
Sbjct: 1036 EIRQKYTEKIREREEIMARRRGKQTTVKQPPPYHLLYFLPDYKVCSNIASLILFAAEKIV 1095

Query: 758  TTEQLDKV 765
              + L+K+
Sbjct: 1096 QKQDLEKI 1103



 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 39/80 (48%), Positives = 52/80 (65%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFN 105
           ++A  +L+ VK  F  +   Y+ FL++MKD KA  IDT  VI+RV ELFKGH+ LI GFN
Sbjct: 280 DNAFYFLEQVKQQFAKQPRIYNQFLDIMKDLKAHNIDTPVVISRVIELFKGHKHLISGFN 339

Query: 106 TFLPKGYEITLPLEDEQPPP 125
           TFLP  Y I +   D++  P
Sbjct: 340 TFLPSDYRIDVSQFDDEGRP 359



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 37/73 (50%), Positives = 48/73 (65%)

Query: 125 PKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHP 184
           PKK  E + A N+V KIK RF     VY+ FL+IL+ Y  E ++I +VY +V  LF+ H 
Sbjct: 456 PKKQSELDHARNYVKKIKNRFINQPDVYRHFLEILHNYHNEPQTIKDVYDQVADLFRSHT 515

Query: 185 DLLEEFTHFLPDS 197
           DLL EFT FLPD+
Sbjct: 516 DLLSEFTQFLPDA 528



 Score = 42.4 bits (98), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 20/62 (32%), Positives = 35/62 (56%)

Query: 48  ALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTF 107
           A  Y+K +K+ F ++ + Y  FLE++ ++  +      V  +V +LF+ H DL+  F  F
Sbjct: 465 ARNYVKKIKNRFINQPDVYRHFLEILHNYHNEPQTIKDVYDQVADLFRSHTDLLSEFTQF 524

Query: 108 LP 109
           LP
Sbjct: 525 LP 526



 Score = 40.0 bits (92), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 20/62 (32%), Positives = 29/62 (46%)

Query: 134 AINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHF 193
           A  F+ ++K +F     +Y  FLDI+   +  N     V   V  LF+ H  L+  F  F
Sbjct: 282 AFYFLEQVKQQFAKQPRIYNQFLDIMKDLKAHNIDTPVVISRVIELFKGHKHLISGFNTF 341

Query: 194 LP 195
           LP
Sbjct: 342 LP 343


>gi|158297347|ref|XP_317596.4| AGAP007892-PA [Anopheles gambiae str. PEST]
 gi|157015152|gb|EAA12860.5| AGAP007892-PA [Anopheles gambiae str. PEST]
          Length = 1774

 Score =  220 bits (561), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 148/447 (33%), Positives = 226/447 (50%), Gaps = 68/447 (15%)

Query: 352  ELSFCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFL 409
            + +F +KV+  LR  D Y++FLRCL LY +EI+++ ELQ+LV   L R+PDL+  F  FL
Sbjct: 711  DYAFFDKVRKALRSPDVYEDFLRCLTLYNQEIVSKMELQTLVSPFLNRFPDLLKWFQDFL 770

Query: 410  ARCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRLD 469
                      A+            IP +       R          +DRDR   E     
Sbjct: 771  GPSTGVGGGAANDC----------IPLTAAAAAAAR----------QDRDRTQSE----- 805

Query: 470  KSVAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTE 529
                                   LA    ++DLS C+R   SY  LPK++     S RT 
Sbjct: 806  -----------------------LAA---DVDLSTCKRLGASYCALPKSHEGVKCSGRTN 839

Query: 530  LGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEE 589
            L  +VLND WVS  + +ED +F   RK QYEE ++RCED+RFELD+++E+ + T + +E 
Sbjct: 840  LCRDVLNDTWVSFPTWAEDSTFVTSRKTQYEEFIYRCEDERFELDVVIETNSATIRVLEG 899

Query: 590  LLEKINNNTIKTDGPIRVEDHF----TALNLRCIERLYGDHGLDVMDVLRKNASLALPVI 645
            + +K+   +       R++D      T ++ R + R+YGD   D++  L+KN S+A+PV+
Sbjct: 900  VQKKLTRMSQDEVSRFRLDDCLGGTSTTIHQRALRRIYGDKAADIIQGLKKNPSVAVPVV 959

Query: 646  LTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKE 705
            L R+K K+EEW   +  FNK W E   K Y KSLDH+   FKQ D K+L +K+L  EI+ 
Sbjct: 960  LRRMKAKEEEWREAQKSFNKQWREQNEKYYLKSLDHQGINFKQTDIKALRSKSLFNEIET 1019

Query: 706  ISEKKRKEDDVLLAI--AAGNRRSIVPHLEFEYSDPDIHEDLYQLIKYSCGEMCTTEQLD 763
            + +++ +++D   A+  A+G      PH+   Y D  I ED   L+ +        ++ +
Sbjct: 1020 LFDERHEQNDDAAAVPQASG------PHMTIPYKDKTILEDAANLLIHHVKRQTGIQKQE 1073

Query: 764  K--VMKIWTTFLEPMLGVPSRPQGAED 788
            K  +  I   F+  +   P R Q +ED
Sbjct: 1074 KARIKHILRQFVPDLFFAP-RQQLSED 1099



 Score = 99.4 bits (246), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 44/81 (54%), Positives = 60/81 (74%)

Query: 41  QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDL 100
           Q+L   DAL+YL  VK  F ++ + Y+DFL++MK+FK+Q IDT GVI RV  LF+GH +L
Sbjct: 86  QRLKVEDALSYLDQVKFRFGNQPQVYNDFLDIMKEFKSQSIDTPGVIQRVSNLFRGHPEL 145

Query: 101 ILGFNTFLPKGYEITLPLEDE 121
           I+GFNTFLP GY+I +   D+
Sbjct: 146 IVGFNTFLPPGYKIEVQANDQ 166



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/78 (41%), Positives = 40/78 (51%), Gaps = 17/78 (21%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI----------------- 169
           +PVEF  AI +VNKIK RF      YK FL+IL+ Y+KE K+                  
Sbjct: 382 QPVEFNHAITYVNKIKNRFHTQPEKYKRFLEILHTYQKEQKTYKEGAQSGCMTSAKQLTE 441

Query: 170 TEVYQEVEALFQDHPDLL 187
            EVY +V  LF +  DLL
Sbjct: 442 AEVYTQVAQLFDNQEDLL 459



 Score = 57.0 bits (136), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 41/67 (61%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           ++ E+A+++++++K RF     VY  FLDI+  ++ ++     V Q V  LF+ HP+L+ 
Sbjct: 88  LKVEDALSYLDQVKFRFGNQPQVYNDFLDIMKEFKSQSIDTPGVIQRVSNLFRGHPELIV 147

Query: 189 EFTHFLP 195
            F  FLP
Sbjct: 148 GFNTFLP 154


>gi|159489912|ref|XP_001702935.1| SIN3 component of histone deacetylase complex [Chlamydomonas
           reinhardtii]
 gi|158270958|gb|EDO96788.1| SIN3 component of histone deacetylase complex [Chlamydomonas
           reinhardtii]
          Length = 542

 Score =  219 bits (557), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 108/170 (63%), Positives = 133/170 (78%), Gaps = 6/170 (3%)

Query: 39  GAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHR 98
              KLTTNDAL+YL+ VK+ F D+++ YD FLE+MK+FKA RIDT GVI +VK+LFKGHR
Sbjct: 33  AGTKLTTNDALSYLREVKNRFADQKDVYDTFLEIMKEFKAARIDTTGVIHKVKQLFKGHR 92

Query: 99  DLILGFNTFLPKGYEITLPL----EDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKS 154
           +LILGFNTFLP+GYEI L      E+E    K+PVEF++AIN+VNKIKTRF  D+ VYK+
Sbjct: 93  ELILGFNTFLPRGYEIELARISDDEEEDDQGKQPVEFDQAINYVNKIKTRFANDERVYKA 152

Query: 155 FLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLPD--SSGAAS 202
           FL+ILNMYRK  K+I +VY EV  LF+ H DLLEEFT+FLPD   SG A+
Sbjct: 153 FLEILNMYRKGQKTINQVYDEVAILFRSHQDLLEEFTYFLPDGTQSGLAA 202



 Score =  182 bits (463), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 95/205 (46%), Positives = 132/205 (64%), Gaps = 1/205 (0%)

Query: 489 KDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSED 548
           + KYL KP+ E+   + ER TPSY  +P  Y    ++ RT L   VLN  +V+V +GSED
Sbjct: 338 RQKYLTKPLSEIVSGDTERVTPSYVKMPPGYPHLVSTGRTPLADSVLNSEFVNVITGSED 397

Query: 549 YSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVE 608
           YSFK MRKNQYEESLFRCEDDR+E +M +E      KR++ L   I   +       +++
Sbjct: 398 YSFKLMRKNQYEESLFRCEDDRYEFEMAIERNTACLKRLKPLALAIQKMSPDERAVFKLD 457

Query: 609 DHFTA-LNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVW 667
           +     ++ R IERLY D G  ++++L++N  +A+PV++ RL+QK EEW R R +  +VW
Sbjct: 458 EGLLGPVHWRSIERLYADQGPMLVELLKRNPVVAIPVVVARLEQKDEEWRRVRMEMTRVW 517

Query: 668 AEIYSKNYHKSLDHRSFYFKQQDSK 692
             IY  NYHKSLDHRSFYFKQ + +
Sbjct: 518 KRIYEANYHKSLDHRSFYFKQAEKR 542



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/65 (46%), Positives = 45/65 (69%), Gaps = 2/65 (3%)

Query: 340 DDKNAMKSMFSQELSFCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGR 397
           DD    +   ++ELS+ E+ K +LR  D Y + L+CL +YT+EII+R EL  L+ D++GR
Sbjct: 265 DDMGRGRPQLAKELSYFERAKQRLRNKDAYNDMLKCLSMYTQEIISRQELLQLLNDIIGR 324

Query: 398 YPDLM 402
           +PDLM
Sbjct: 325 FPDLM 329


>gi|428164033|gb|EKX33075.1| hypothetical protein GUITHDRAFT_81778, partial [Guillardia theta
           CCMP2712]
          Length = 500

 Score =  218 bits (556), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 104/198 (52%), Positives = 135/198 (68%), Gaps = 1/198 (0%)

Query: 496 PIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMR 555
           PI E+D SNC     SY+ LP +Y +P+ + RTEL  EVLND WVSV SGSEDYSF H R
Sbjct: 303 PISEIDFSNCASMGTSYKCLPADYPLPTCAGRTELCDEVLNDEWVSVPSGSEDYSFTHYR 362

Query: 556 KNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVE-DHFTAL 614
           KNQYEESLF+CEDDRFELDML+E+     + +E LLE +           ++      A+
Sbjct: 363 KNQYEESLFKCEDDRFELDMLIETNASAIRAMEPLLESVQECDKDRSRSAKINISSLKAI 422

Query: 615 NLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKN 674
           + + IER+YGDHG ++ + +++   +AL V+L RLKQK EEW + R D N++W E+Y  N
Sbjct: 423 HYKAIERVYGDHGQEITEHVKRAPRVALSVVLPRLKQKDEEWRKARRDMNRIWREVYKDN 482

Query: 675 YHKSLDHRSFYFKQQDSK 692
           Y+KSLDHRSFYFKQ D K
Sbjct: 483 YYKSLDHRSFYFKQIDKK 500



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 85/183 (46%), Positives = 107/183 (58%), Gaps = 11/183 (6%)

Query: 41  QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDL 100
           QKL   DAL YL  VK  F D  E Y+ FL++MKDFK+  IDT  VI RV +LF GH+ L
Sbjct: 2   QKLKETDALDYLNQVKKQFGDNPEIYNKFLDIMKDFKSHAIDTQRVIERVSKLFHGHQSL 61

Query: 101 ILGFNTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILN 160
           ILGFNTFLP GY+I           K   EF+ A ++V+KIK RF    +VY+ FL IL 
Sbjct: 62  ILGFNTFLPAGYKIEKLATPAAQNKKAAPEFDHAYSYVSKIKARFANQPNVYQQFLQILQ 121

Query: 161 MYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSA 220
            Y+ E  +I +V ++V  LF  H DLL EF +FLPD S        PSG +       +A
Sbjct: 122 RYKDEGYAIAQVKEQVAELFAGHEDLLGEFGNFLPDPSANK-----PSGVS------GAA 170

Query: 221 MPT 223
           MP+
Sbjct: 171 MPS 173



 Score = 42.0 bits (97), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 8/80 (10%)

Query: 335 VSSSYDDKNAMKSMFSQELSFCEKVKDKLR-----DDYQEFLRCLHLYTKEIITRSELQS 389
           V+SS  D++  +S   +  S+   V  KLR     + Y +FL+CL LY ++++T +EL +
Sbjct: 216 VTSSASDRDRQRSCPRRCNSYLSIVFLKLRMMQAPNCYTDFLKCLSLYVQDVLTANELIT 275

Query: 390 LVGDLLG---RYPDLMDGFN 406
           L+ DL+G    Y  + DG N
Sbjct: 276 LLEDLMGGLKHYLGIRDGPN 295


>gi|392570905|gb|EIW64077.1| hypothetical protein TRAVEDRAFT_32917 [Trametes versicolor
           FP-101664 SS1]
          Length = 1189

 Score =  213 bits (542), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 179/646 (27%), Positives = 292/646 (45%), Gaps = 124/646 (19%)

Query: 130 EFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI---TEVYQEVEALFQDHPDL 186
           EF  AIN++NKIK R+Q D   YK FL+IL  Y+KE K +   T+VY +V+ LF+D PDL
Sbjct: 151 EFHHAINYLNKIKLRYQDDPETYKQFLEILQTYQKEQKHVQDQTQVYAQVQMLFKDAPDL 210

Query: 187 LEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQVHVDKKERAMASHADRDLSV 246
           ++EF  FLP+++G A+ H    G   IL       PTA      +   +  +H       
Sbjct: 211 MDEFKDFLPEATGPAA-HL--QGVVGIL-----PQPTAG----PRIPGSFTTH------- 251

Query: 247 DRPDPDHDRVLLKSDKDQ-RRRGEKERERRDDHRRERERDDRDFENDVNRDFSMQRF--- 302
           + P P       KS K Q RRR   E+E     +    R  +  +     D +  +F   
Sbjct: 252 EAPQPTE-----KSTKTQSRRRKRPEKEPAAPPKGPGGRAVKRAKTTQKPDTASPKFSPY 306

Query: 303 ---PHKRKSAR-KIEDSTAEPLHQGGEGDENFGMHPVSSSYDDKNAMKSMFSQELSFCEK 358
              PH  +     +  + A P+H  G        HP+  +           ++E +F ++
Sbjct: 307 QGPPHSPQPVNVHVHPAMAAPMHPPGP-------HPIRPASVGPGPPVPTANEEFNFFDR 359

Query: 359 VKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLARCEKSE 416
            K  L     Y EFL+ L+L+++                                     
Sbjct: 360 AKKALEHGGSYDEFLKLLNLFSR------------------------------------- 382

Query: 417 ELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRLDKSVAFVN 476
               D++S ++L +   +                    + D D  A+ KD L       N
Sbjct: 383 ----DIVSTRTLIDRAEV-------------------FLGDGDLMAQFKDLLSWDDRLGN 419

Query: 477 KDVGPKMSMYS-SKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVL 535
           +D GP  S+ + + D Y A+P  +          PSYR LP + +  + S R +L   VL
Sbjct: 420 RDEGPPGSLRTGAPDYYTARPPDDGQ-------GPSYRRLPDSEVRLACSGRDQLCWSVL 472

Query: 536 NDHWVS-VTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKI 594
           ND WVS  T  SE+  F   +KN +E++L + E++R E  + +E++  T   +E L  +I
Sbjct: 473 NDKWVSHPTWASEEAGFMTHKKNSFEDTLHKSEEERHEFQVHIEALTRTIAVLEPLEARI 532

Query: 595 NNNTIKTDGPIRVEDHFTALNL----RCIERLYG-DHGLDVMDVLRKNASLALPVILTRL 649
           +    +     R++ +   ++     R I+R+YG D G +V+  L++  ++A+PV+LTRL
Sbjct: 533 DGMGPEERAAFRLKPNLGGMSRTVYERIIKRIYGYDAGNEVLRALQETPAVAVPVVLTRL 592

Query: 650 KQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEK 709
           ++K EEW R + ++N+ W E+ +KN++K+LDH+   FKQ D K + AK+   EI+     
Sbjct: 593 RRKDEEWRRAQREWNRTWREVDAKNFYKALDHQGIAFKQSDKKGITAKSFVFEIESAKAA 652

Query: 710 KRKEDD------VLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLI 749
           + KE D                RS+   LE+ + D  +  D  +L+
Sbjct: 653 QMKERDREASNSGSSTSGGMPMRSLGYQLEYAFEDAGVLLDAVKLV 698



 Score = 43.5 bits (101), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 3/66 (4%)

Query: 48  ALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQR---IDTAGVIARVKELFKGHRDLILGF 104
           A+ YL  +K  +QD  E Y  FLE+++ ++ ++    D   V A+V+ LFK   DL+  F
Sbjct: 155 AINYLNKIKLRYQDDPETYKQFLEILQTYQKEQKHVQDQTQVYAQVQMLFKDAPDLMDEF 214

Query: 105 NTFLPK 110
             FLP+
Sbjct: 215 KDFLPE 220


>gi|340723348|ref|XP_003400052.1| PREDICTED: paired amphipathic helix protein Sin3b-like [Bombus
           terrestris]
          Length = 1518

 Score =  212 bits (540), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 130/402 (32%), Positives = 209/402 (51%), Gaps = 57/402 (14%)

Query: 354 SFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLAR 411
           +F +KV+  LR    Y+ FLRCL L+ +EI+++SEL  LV   LGR+P+L+  F  FL  
Sbjct: 602 AFFDKVRKALRSQEVYENFLRCLVLFNQEIVSKSELVQLVTPFLGRFPELLRWFKDFL-- 659

Query: 412 CEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRLDKS 471
                               G +P+S      +   +                       
Sbjct: 660 --------------------GHLPESSSTNTTNASGN----------------------- 676

Query: 472 VAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELG 531
              +N +  P   + S +++       E+D + C+R   SY  LPK+Y+ P  + RT+L 
Sbjct: 677 ---LNVEALPNNVVRSHQERPQGDLAMEIDYTACKRLGASYCALPKSYVQPKCTGRTQLC 733

Query: 532 AEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELL 591
            EVLND WVS  + SED +F   RK QYEE ++RCED+RFELD ++E+   T + +E + 
Sbjct: 734 KEVLNDTWVSFPTWSEDSTFVTSRKTQYEEFIYRCEDERFELDGVIETNASTIRVLEGVH 793

Query: 592 EKINNNTIKTDGPIRVEDHF----TALNLRCIERLYGDHGLDVMDVLRKNASLALPVILT 647
           +K++  + +     +++D        ++ R ++R+YGD   D++D L+KN  +A+PV+L 
Sbjct: 794 KKMSRMSQEELQKFKLDDCLGGCSPTIHQRALKRIYGDKAADIIDGLKKNPVVAVPVVLR 853

Query: 648 RLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEIS 707
           RLK K+EEW   +  FNK+W E   K Y KSLDH+   FKQ D K+L +K+L  EI+ + 
Sbjct: 854 RLKSKEEEWREAQKGFNKLWREQNEKYYLKSLDHQGINFKQNDVKALRSKSLFNEIETLY 913

Query: 708 EKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLI 749
           +++ ++ D     +   + +  PHL   Y D  + +D   L+
Sbjct: 914 DERHEQVD---DGSGDGQNNSGPHLVLPYKDKSVLDDAANLL 952



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 45/74 (60%), Positives = 57/74 (77%)

Query: 41  QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDL 100
           Q+L   DAL+YL  VK  F D+ + Y+DFL++MK+FK+Q IDT GVI RV  LFKGH +L
Sbjct: 174 QRLKVEDALSYLDQVKYKFSDQPQVYNDFLDIMKEFKSQSIDTPGVITRVSHLFKGHPEL 233

Query: 101 ILGFNTFLPKGYEI 114
           I+GFNTFLP GY+I
Sbjct: 234 IVGFNTFLPPGYKI 247



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 41/99 (41%), Positives = 54/99 (54%), Gaps = 23/99 (23%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI----------------- 169
           +PVEF  AIN+VNKIK RFQG    YK FL+IL+ Y+KE +++                 
Sbjct: 373 QPVEFNHAINYVNKIKNRFQGQPDKYKRFLEILHTYQKEQRNLKESGHMGGTSGSGASGG 432

Query: 170 ------TEVYQEVEALFQDHPDLLEEFTHFLPDSSGAAS 202
                  EVY +V  LF++  DLL EF  FLPD++   S
Sbjct: 433 AKHLTEAEVYSQVAKLFENQEDLLAEFGQFLPDATNQQS 471



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 40/67 (59%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           ++ E+A+++++++K +F     VY  FLDI+  ++ ++     V   V  LF+ HP+L+ 
Sbjct: 176 LKVEDALSYLDQVKYKFSDQPQVYNDFLDIMKEFKSQSIDTPGVITRVSHLFKGHPELIV 235

Query: 189 EFTHFLP 195
            F  FLP
Sbjct: 236 GFNTFLP 242



 Score = 42.7 bits (99), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 31/107 (28%)

Query: 26  SGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDF-KAQR---- 80
           SGQTQ         +Q +  N A+ Y+  +K+ FQ + +KY  FLE++  + K QR    
Sbjct: 366 SGQTQ--------QSQPVEFNHAINYVNKIKNRFQGQPDKYKRFLEILHTYQKEQRNLKE 417

Query: 81  ------------------IDTAGVIARVKELFKGHRDLILGFNTFLP 109
                             +  A V ++V +LF+   DL+  F  FLP
Sbjct: 418 SGHMGGTSGSGASGGAKHLTEAEVYSQVAKLFENQEDLLAEFGQFLP 464


>gi|350401320|ref|XP_003486117.1| PREDICTED: paired amphipathic helix protein Sin3b-like [Bombus
           impatiens]
          Length = 1518

 Score =  212 bits (540), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 132/417 (31%), Positives = 213/417 (51%), Gaps = 57/417 (13%)

Query: 354 SFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLAR 411
           +F +KV+  LR    Y+ FLRCL L+ +EI+++SEL  LV   LGR+P+L+  F  FL  
Sbjct: 602 AFFDKVRKALRSQEVYENFLRCLVLFNQEIVSKSELVQLVTPFLGRFPELLRWFKDFL-- 659

Query: 412 CEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRLDKS 471
                               G +P+S      +   +                       
Sbjct: 660 --------------------GHLPESSSTNATNASGN----------------------- 676

Query: 472 VAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELG 531
              +N +  P   + S +++       E+D + C+R   SY  LPK+Y+ P  + RT+L 
Sbjct: 677 ---LNVEALPNNVVRSHQERPQGDLAMEIDYTACKRLGASYCALPKSYVQPKCTGRTQLC 733

Query: 532 AEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELL 591
            EVLND WVS  + SED +F   RK QYEE ++RCED+RFELD ++E+   T + +E + 
Sbjct: 734 KEVLNDTWVSFPTWSEDSTFVTSRKTQYEEFIYRCEDERFELDGVIETNASTIRVLEGVH 793

Query: 592 EKINNNTIKTDGPIRVEDHF----TALNLRCIERLYGDHGLDVMDVLRKNASLALPVILT 647
           +K++  + +     +++D        ++ R ++R+YGD   D++D L+KN  +A+PV+L 
Sbjct: 794 KKMSRMSQEELQKFKLDDCLGGCSPTIHQRALKRIYGDKAADIIDGLKKNPVVAVPVVLR 853

Query: 648 RLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEIS 707
           RLK K+EEW   +  FNK+W E   K Y KSLDH+   FKQ D K+L +K+L  EI+ + 
Sbjct: 854 RLKSKEEEWREAQKGFNKLWREQNEKYYLKSLDHQGINFKQNDVKALRSKSLFNEIETLY 913

Query: 708 EKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLIKYSCGEMCTTEQLDK 764
           +++ ++ D     +   + +  PHL   Y D  + +D   L+ +         + DK
Sbjct: 914 DERHEQVD---DGSGDGQNNSGPHLVLPYKDKSVLDDAANLLIHHVKRQTAIHKEDK 967



 Score =  102 bits (253), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 45/74 (60%), Positives = 57/74 (77%)

Query: 41  QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDL 100
           Q+L   DAL+YL  VK  F D+ + Y+DFL++MK+FK+Q IDT GVI RV  LFKGH +L
Sbjct: 174 QRLKVEDALSYLDQVKYKFSDQPQVYNDFLDIMKEFKSQSIDTPGVITRVSHLFKGHPEL 233

Query: 101 ILGFNTFLPKGYEI 114
           I+GFNTFLP GY+I
Sbjct: 234 IVGFNTFLPPGYKI 247



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 41/99 (41%), Positives = 54/99 (54%), Gaps = 23/99 (23%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI----------------- 169
           +PVEF  AIN+VNKIK RFQG    YK FL+IL+ Y+KE +++                 
Sbjct: 373 QPVEFNHAINYVNKIKNRFQGQPDKYKRFLEILHTYQKEQRNLKESGHMGGTSGSGASSG 432

Query: 170 ------TEVYQEVEALFQDHPDLLEEFTHFLPDSSGAAS 202
                  EVY +V  LF++  DLL EF  FLPD++   S
Sbjct: 433 AKHLTEAEVYSQVAKLFENQEDLLAEFGQFLPDATNQQS 471



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 40/67 (59%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           ++ E+A+++++++K +F     VY  FLDI+  ++ ++     V   V  LF+ HP+L+ 
Sbjct: 176 LKVEDALSYLDQVKYKFSDQPQVYNDFLDIMKEFKSQSIDTPGVITRVSHLFKGHPELIV 235

Query: 189 EFTHFLP 195
            F  FLP
Sbjct: 236 GFNTFLP 242



 Score = 42.7 bits (99), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 31/107 (28%)

Query: 26  SGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDF-KAQR---- 80
           SGQTQ         +Q +  N A+ Y+  +K+ FQ + +KY  FLE++  + K QR    
Sbjct: 366 SGQTQ--------QSQPVEFNHAINYVNKIKNRFQGQPDKYKRFLEILHTYQKEQRNLKE 417

Query: 81  ------------------IDTAGVIARVKELFKGHRDLILGFNTFLP 109
                             +  A V ++V +LF+   DL+  F  FLP
Sbjct: 418 SGHMGGTSGSGASSGAKHLTEAEVYSQVAKLFENQEDLLAEFGQFLP 464


>gi|428166457|gb|EKX35432.1| hypothetical protein GUITHDRAFT_51608, partial [Guillardia theta
           CCMP2712]
          Length = 527

 Score =  212 bits (540), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 100/197 (50%), Positives = 140/197 (71%), Gaps = 2/197 (1%)

Query: 496 PIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMR 555
           PI E+D SNC     SY+ LPK+Y +P+ S RTEL   VLND WVSV SGSED+++ H R
Sbjct: 333 PISEIDFSNCLSAGISYKSLPKDYPLPACSGRTELCEFVLNDEWVSVPSGSEDFNYTHYR 392

Query: 556 KNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFTALN 615
           KNQYEESLF+CEDDRFELDML+E+   T + +E+++++  N+  ++           A++
Sbjct: 393 KNQYEESLFKCEDDRFELDMLIEANASTLRLLEQIVDE--NDKDRSRAQKLNLSSLKAIH 450

Query: 616 LRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNY 675
            + IER+YGD+G ++++ L++   +AL V+L RL+QK +EW + R D NK+W E+Y  NY
Sbjct: 451 FKAIERVYGDYGPEIVEHLKRAPRVALNVVLPRLRQKDDEWRKARRDMNKIWREVYKDNY 510

Query: 676 HKSLDHRSFYFKQQDSK 692
           +KSLDHRSFYFKQ D K
Sbjct: 511 YKSLDHRSFYFKQVDKK 527



 Score =  156 bits (394), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 81/166 (48%), Positives = 108/166 (65%), Gaps = 5/166 (3%)

Query: 42  KLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLI 101
           +L   DAL YL  VK  F D  E Y+ FL++MKDFK+  IDT  VI RV +LF GH++LI
Sbjct: 1   QLKETDALDYLNQVKSQFGDNPEVYNKFLDIMKDFKSHSIDTQKVIERVSKLFSGHQNLI 60

Query: 102 LGFNTFLPKGYEITL--PLEDEQP---PPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFL 156
           LGFNTFLP+GY+I +  P  +++P     K   EF+ A ++V+KIK RF  D  VY+ FL
Sbjct: 61  LGFNTFLPQGYKIEIRQPTANKKPTQAAKKSAPEFDHAYSYVSKIKQRFANDQEVYQKFL 120

Query: 157 DILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAAS 202
            IL  Y++E  +I +V Q+V  LF  H DLL EF +FLPD +  A+
Sbjct: 121 QILQRYKEEGSAIAQVKQQVAELFAGHDDLLGEFGNFLPDPANKAT 166


>gi|66813208|ref|XP_640783.1| paired amphipathic helix  containing protein [Dictyostelium
            discoideum AX4]
 gi|60468819|gb|EAL66819.1| paired amphipathic helix  containing protein [Dictyostelium
            discoideum AX4]
          Length = 1934

 Score =  212 bits (539), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 116/274 (42%), Positives = 172/274 (62%), Gaps = 11/274 (4%)

Query: 499  ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQ 558
            E+D + C+R  PSYR LPKNY  P  + R+EL   VLND WVS  +GSED+ FK  RKNQ
Sbjct: 1180 EIDFTTCKRLGPSYRALPKNYPQPRCTGRSELAESVLNDVWVSFPTGSEDFGFKSQRKNQ 1239

Query: 559  YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVE---DHFTALN 615
            +EE+LF+CED+RFELD+++E +N +T RV   L+ I N+ I      R+     +   L+
Sbjct: 1240 FEENLFKCEDERFELDLIIE-LNASTIRV---LDPILNSLIDMHDHERLNFRMPNLDVLH 1295

Query: 616  LRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNY 675
             R IERLY + G++++  L  N  ++LPVIL RLKQK +EW + + ++NKVW +   KNY
Sbjct: 1296 HRSIERLYNNKGMEIITALYNNPLVSLPVILKRLKQKDQEWRKAKREWNKVWKDTTEKNY 1355

Query: 676  HKSLDHRSFYFKQQDSKSLGAKALSAEIKE-ISEKKRKEDDVLLAIAAGNRRSIVP---H 731
            ++SLD++S  FKQ D K+L  K L AEI++  SEK R+ DD+L   +   +  I P   H
Sbjct: 1356 YRSLDYQSTSFKQSDKKTLTPKVLLAEIRQKYSEKIRERDDLLQRRSRIKQTIIKPPPYH 1415

Query: 732  LEFEYSDPDIHEDLYQLIKYSCGEMCTTEQLDKV 765
            L +   D  +  ++  LI ++  ++   + L+K+
Sbjct: 1416 LLYFMPDYKVCSNISSLILFAAEKIVQKQDLEKI 1449



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 39/74 (52%), Positives = 49/74 (66%)

Query: 41  QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDL 100
           Q+   ++A  +L+ VK  F  +   Y+ FL++MKD KA  IDT  VIARV ELFKGH+ L
Sbjct: 411 QQQQFDNAFYFLEQVKMQFSKQPRIYNQFLDIMKDLKAHNIDTPVVIARVIELFKGHKHL 470

Query: 101 ILGFNTFLPKGYEI 114
           I GFNTFLP  Y I
Sbjct: 471 ISGFNTFLPADYRI 484



 Score = 76.3 bits (186), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 36/73 (49%), Positives = 48/73 (65%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
            E + A N+V KIK RF     VY+ FL+IL+ Y  E ++I +VY +V  LF+ HPDLL 
Sbjct: 623 TELDHARNYVKKIKNRFINQPDVYRHFLEILHNYHNEPQTIKDVYDQVADLFRAHPDLLS 682

Query: 189 EFTHFLPDSSGAA 201
           EFT FLPD+  A+
Sbjct: 683 EFTQFLPDAVNAS 695



 Score = 58.9 bits (141), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/72 (44%), Positives = 48/72 (66%), Gaps = 3/72 (4%)

Query: 351  QELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGD-LLGRYPDLMDGFNG 407
            +EL F  KV+  + ++  Y EFL+CL+L+++EII+R+EL  LV D LL R P L + F  
Sbjct: 1092 EELDFFHKVRTGVPNNKLYNEFLKCLNLFSQEIISRTELVLLVKDILLPRLPALFEWFKS 1151

Query: 408  FLARCEKSEELL 419
            F+   ++S ELL
Sbjct: 1152 FIGVDDQSIELL 1163



 Score = 47.0 bits (110), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 4/77 (5%)

Query: 123 PPPKKPV----EFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEA 178
           P P+ P+    +F+ A  F+ ++K +F     +Y  FLDI+   +  N     V   V  
Sbjct: 403 PAPQSPIRQQQQFDNAFYFLEQVKMQFSKQPRIYNQFLDIMKDLKAHNIDTPVVIARVIE 462

Query: 179 LFQDHPDLLEEFTHFLP 195
           LF+ H  L+  F  FLP
Sbjct: 463 LFKGHKHLISGFNTFLP 479



 Score = 42.4 bits (98), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 20/62 (32%), Positives = 35/62 (56%)

Query: 48  ALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTF 107
           A  Y+K +K+ F ++ + Y  FLE++ ++  +      V  +V +LF+ H DL+  F  F
Sbjct: 628 ARNYVKKIKNRFINQPDVYRHFLEILHNYHNEPQTIKDVYDQVADLFRAHPDLLSEFTQF 687

Query: 108 LP 109
           LP
Sbjct: 688 LP 689


>gi|345490283|ref|XP_003426344.1| PREDICTED: paired amphipathic helix protein Sin3a-like isoform 2
            [Nasonia vitripennis]
          Length = 1379

 Score =  212 bits (539), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 139/445 (31%), Positives = 224/445 (50%), Gaps = 39/445 (8%)

Query: 354  SFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLAR 411
            +F +KV+  L+    Y  FLRCL L+  EII+++EL  LV   L R+P+L   F  FL  
Sbjct: 623  AFFDKVRKALKSPEVYDNFLRCLVLFNLEIISKNELVLLVNPFLCRFPELQRWFRDFLGH 682

Query: 412  CEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRLDKS 471
              ++  +L       +    G I     V +                             
Sbjct: 683  LPEAAAMLTQAACGPN-QTSGSINSGSAVGN---------------------------VI 714

Query: 472  VAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELG 531
            V+ V  +  P   + S +D+       E+D S C+R   SY  LPK+Y+ P  + RT+L 
Sbjct: 715  VSSVGIEALPNNVVRSHQDRPQGDLAMEIDYSTCKRLGASYCALPKSYMQPKCTGRTQLC 774

Query: 532  AEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELL 591
             EVLND WVS  + SED +F   RK Q+EE ++RCED+RFELD ++E+   T + +E + 
Sbjct: 775  KEVLNDTWVSFPTWSEDSTFVSSRKTQFEEFIYRCEDERFELDGVIETNAATIRVLEGVH 834

Query: 592  EKINNNTIKTDGPIRVEDHF----TALNLRCIERLYGDHGLDVMDVLRKNASLALPVILT 647
            +K+N    +     +++D        ++ R ++R+YG+   D+++ L+KN  +A+PV+L 
Sbjct: 835  KKMNRMPPEELQKFKLDDCLGGCSPTIHQRALKRIYGEKATDIIEGLKKNPMVAVPVVLR 894

Query: 648  RLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEIS 707
            RLK K+EEW   +  FNK+W E   K Y KSLDH+   FKQ D K+L +K+L  EI+ + 
Sbjct: 895  RLKSKEEEWREAQKGFNKIWREQNEKYYLKSLDHQGINFKQNDVKALRSKSLFNEIELLY 954

Query: 708  EKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLIKYSCGEMCTTEQLDKV-M 766
            +++ ++ +      A N+ +  PHL   Y D  + +D   L+ +         + DK  +
Sbjct: 955  DERHEQSEE----NAENQNNTGPHLVLIYKDKSVLDDAANLLIHHVKRQTAIHKEDKQRI 1010

Query: 767  KIWTTFLEPMLGVPSRPQGAEDTED 791
            K       P L   +R + ++D +D
Sbjct: 1011 KALLKHFIPDLFFHTRQELSDDEQD 1035



 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 47/82 (57%), Positives = 59/82 (71%)

Query: 33  GGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKE 92
           GG      Q+L   DAL+YL  VK  F D+ + Y+DFL++MK+FK+Q IDT GVI RV  
Sbjct: 163 GGTSSSQFQRLKVEDALSYLDQVKYKFSDQPQVYNDFLDIMKEFKSQTIDTPGVITRVSH 222

Query: 93  LFKGHRDLILGFNTFLPKGYEI 114
           LFKGH +LI+GFNTFLP GY+I
Sbjct: 223 LFKGHPELIVGFNTFLPPGYKI 244



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 41/100 (41%), Positives = 54/100 (54%), Gaps = 24/100 (24%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI----------------- 169
           +PVEF  AIN+VNKIK RFQG    YK FL+IL+ Y+KE +++                 
Sbjct: 368 QPVEFNHAINYVNKIKNRFQGQPDKYKRFLEILHTYQKEQRTLKESGHMGGSGTGGGCPG 427

Query: 170 -------TEVYQEVEALFQDHPDLLEEFTHFLPDSSGAAS 202
                   EVY +V  LF++  DLL EF  FLPD++   S
Sbjct: 428 SGKHLTEAEVYSQVAKLFENQEDLLLEFGQFLPDATNQQS 467



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 39/67 (58%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           ++ E+A+++++++K +F     VY  FLDI+  ++ +      V   V  LF+ HP+L+ 
Sbjct: 173 LKVEDALSYLDQVKYKFSDQPQVYNDFLDIMKEFKSQTIDTPGVITRVSHLFKGHPELIV 232

Query: 189 EFTHFLP 195
            F  FLP
Sbjct: 233 GFNTFLP 239



 Score = 43.5 bits (101), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 53/127 (41%), Gaps = 26/127 (20%)

Query: 9   YMNSQIKRPMISSRGEPSGQTQ--VVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKY 66
           Y NS +      +  +   Q Q  V   G     Q +  N A+ Y+  +K+ FQ + +KY
Sbjct: 334 YNNSHVTTAQAQAVSQALSQAQDGVPSTGQTQQNQPVEFNHAINYVNKIKNRFQGQPDKY 393

Query: 67  DDFLEVMKDF-KAQR-----------------------IDTAGVIARVKELFKGHRDLIL 102
             FLE++  + K QR                       +  A V ++V +LF+   DL+L
Sbjct: 394 KRFLEILHTYQKEQRTLKESGHMGGSGTGGGCPGSGKHLTEAEVYSQVAKLFENQEDLLL 453

Query: 103 GFNTFLP 109
            F  FLP
Sbjct: 454 EFGQFLP 460


>gi|345490281|ref|XP_001605941.2| PREDICTED: paired amphipathic helix protein Sin3a-like isoform 1
            [Nasonia vitripennis]
          Length = 1557

 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 139/445 (31%), Positives = 224/445 (50%), Gaps = 39/445 (8%)

Query: 354  SFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLAR 411
            +F +KV+  L+    Y  FLRCL L+  EII+++EL  LV   L R+P+L   F  FL  
Sbjct: 628  AFFDKVRKALKSPEVYDNFLRCLVLFNLEIISKNELVLLVNPFLCRFPELQRWFRDFLGH 687

Query: 412  CEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRLDKS 471
              ++  +L       +    G I     V +                             
Sbjct: 688  LPEAAAMLTQAACGPN-QTSGSINSGSAVGN---------------------------VI 719

Query: 472  VAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELG 531
            V+ V  +  P   + S +D+       E+D S C+R   SY  LPK+Y+ P  + RT+L 
Sbjct: 720  VSSVGIEALPNNVVRSHQDRPQGDLAMEIDYSTCKRLGASYCALPKSYMQPKCTGRTQLC 779

Query: 532  AEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELL 591
             EVLND WVS  + SED +F   RK Q+EE ++RCED+RFELD ++E+   T + +E + 
Sbjct: 780  KEVLNDTWVSFPTWSEDSTFVSSRKTQFEEFIYRCEDERFELDGVIETNAATIRVLEGVH 839

Query: 592  EKINNNTIKTDGPIRVEDHF----TALNLRCIERLYGDHGLDVMDVLRKNASLALPVILT 647
            +K+N    +     +++D        ++ R ++R+YG+   D+++ L+KN  +A+PV+L 
Sbjct: 840  KKMNRMPPEELQKFKLDDCLGGCSPTIHQRALKRIYGEKATDIIEGLKKNPMVAVPVVLR 899

Query: 648  RLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEIS 707
            RLK K+EEW   +  FNK+W E   K Y KSLDH+   FKQ D K+L +K+L  EI+ + 
Sbjct: 900  RLKSKEEEWREAQKGFNKIWREQNEKYYLKSLDHQGINFKQNDVKALRSKSLFNEIELLY 959

Query: 708  EKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLIKYSCGEMCTTEQLDKV-M 766
            +++ ++ +      A N+ +  PHL   Y D  + +D   L+ +         + DK  +
Sbjct: 960  DERHEQSEE----NAENQNNTGPHLVLIYKDKSVLDDAANLLIHHVKRQTAIHKEDKQRI 1015

Query: 767  KIWTTFLEPMLGVPSRPQGAEDTED 791
            K       P L   +R + ++D +D
Sbjct: 1016 KALLKHFIPDLFFHTRQELSDDEQD 1040



 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 47/82 (57%), Positives = 59/82 (71%)

Query: 33  GGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKE 92
           GG      Q+L   DAL+YL  VK  F D+ + Y+DFL++MK+FK+Q IDT GVI RV  
Sbjct: 163 GGTSSSQFQRLKVEDALSYLDQVKYKFSDQPQVYNDFLDIMKEFKSQTIDTPGVITRVSH 222

Query: 93  LFKGHRDLILGFNTFLPKGYEI 114
           LFKGH +LI+GFNTFLP GY+I
Sbjct: 223 LFKGHPELIVGFNTFLPPGYKI 244



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 41/100 (41%), Positives = 54/100 (54%), Gaps = 24/100 (24%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI----------------- 169
           +PVEF  AIN+VNKIK RFQG    YK FL+IL+ Y+KE +++                 
Sbjct: 368 QPVEFNHAINYVNKIKNRFQGQPDKYKRFLEILHTYQKEQRTLKESGHMGGSGTGGGCPG 427

Query: 170 -------TEVYQEVEALFQDHPDLLEEFTHFLPDSSGAAS 202
                   EVY +V  LF++  DLL EF  FLPD++   S
Sbjct: 428 SGKHLTEAEVYSQVAKLFENQEDLLLEFGQFLPDATNQQS 467



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 39/67 (58%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           ++ E+A+++++++K +F     VY  FLDI+  ++ +      V   V  LF+ HP+L+ 
Sbjct: 173 LKVEDALSYLDQVKYKFSDQPQVYNDFLDIMKEFKSQTIDTPGVITRVSHLFKGHPELIV 232

Query: 189 EFTHFLP 195
            F  FLP
Sbjct: 233 GFNTFLP 239



 Score = 43.9 bits (102), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 53/127 (41%), Gaps = 26/127 (20%)

Query: 9   YMNSQIKRPMISSRGEPSGQTQ--VVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKY 66
           Y NS +      +  +   Q Q  V   G     Q +  N A+ Y+  +K+ FQ + +KY
Sbjct: 334 YNNSHVTTAQAQAVSQALSQAQDGVPSTGQTQQNQPVEFNHAINYVNKIKNRFQGQPDKY 393

Query: 67  DDFLEVMKDF-KAQR-----------------------IDTAGVIARVKELFKGHRDLIL 102
             FLE++  + K QR                       +  A V ++V +LF+   DL+L
Sbjct: 394 KRFLEILHTYQKEQRTLKESGHMGGSGTGGGCPGSGKHLTEAEVYSQVAKLFENQEDLLL 453

Query: 103 GFNTFLP 109
            F  FLP
Sbjct: 454 EFGQFLP 460


>gi|328875114|gb|EGG23479.1| paired amphipathic helix containing protein [Dictyostelium
            fasciculatum]
          Length = 1566

 Score =  210 bits (535), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 110/269 (40%), Positives = 167/269 (62%), Gaps = 7/269 (2%)

Query: 499  ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQ 558
            E+D S C+R  PSYR LPKNY  P  + RTEL A VLND WVS  +GSED+ FK  RKNQ
Sbjct: 844  EVDFSTCKRLGPSYRALPKNYPQPKCTGRTELSASVLNDVWVSFPTGSEDFGFKSQRKNQ 903

Query: 559  YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFTALNLRC 618
            +EE LF+CED+RFELD+++E    T K ++ + + ++          R+      L+ R 
Sbjct: 904  FEEILFKCEDERFELDLVIELNASTIKILDPIYQTLSELNENDRHHFRIPT-LDVLHHRS 962

Query: 619  IERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKS 678
            IERLYG+ G++++ ++ +N   ALP+I+ RLKQK +EW + + ++NKVW E   KNY++S
Sbjct: 963  IERLYGNRGVEMVTMMYQNPFGALPIIIKRLKQKDQEWTKAKREWNKVWKETTEKNYYRS 1022

Query: 679  LDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNR------RSIVPHL 732
            LD++S YFKQ + K+L  K L AEI++   +K KE + +++ A+  R      +S   HL
Sbjct: 1023 LDYQSTYFKQSEKKNLTPKMLLAEIRQKFTEKLKEKEEIISNASKRRGKNQIAQSPPYHL 1082

Query: 733  EFEYSDPDIHEDLYQLIKYSCGEMCTTEQ 761
             +   +  +  D+  LI ++  +M   +Q
Sbjct: 1083 LYSMINYKVCSDISNLIIFAAEKMVQNKQ 1111



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 46/76 (60%), Positives = 57/76 (75%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFN 105
           ++A  +L+ VK  F  + + Y+ FL++MKD KA  IDT GVIARVKELFKGHR LILGFN
Sbjct: 308 DNAFNFLEQVKLQFAKEPQIYNQFLDIMKDLKAHNIDTPGVIARVKELFKGHRHLILGFN 367

Query: 106 TFLPKGYEITLPLEDE 121
           TFLP  Y I LPL++E
Sbjct: 368 TFLPTEYRIDLPLDEE 383



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 35/71 (49%), Positives = 49/71 (69%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           KK +E + A N+V KIK RF    ++YK FL++L+ Y++E + I EVY++V  LF+ H D
Sbjct: 529 KKQMELDHARNYVKKIKDRFVHQPYIYKQFLEVLHNYQREQQPIHEVYEQVAELFKQHGD 588

Query: 186 LLEEFTHFLPD 196
           LL EF  FLPD
Sbjct: 589 LLIEFRQFLPD 599



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/89 (41%), Positives = 54/89 (60%), Gaps = 8/89 (8%)

Query: 351 QELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGD-LLGRYPDLMDGFNG 407
           +E+ F  KV+  +     Y EFL+CL+L+++EII+R+EL  LV D LL R P L D F  
Sbjct: 756 EEIDFFTKVRQGVASPKFYHEFLKCLNLFSQEIISRTELVLLVKDILLPRQPLLYDWFKS 815

Query: 408 FLARCEKSEELL-----ADVMSKKSLWNE 431
           F+   E+S E+L     A   SK++ W+E
Sbjct: 816 FIGVDEQSLEILERQEQALSPSKQNAWSE 844



 Score = 49.7 bits (117), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 38/71 (53%)

Query: 125 PKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHP 184
           P++  +F+ A NF+ ++K +F  +  +Y  FLDI+   +  N     V   V+ LF+ H 
Sbjct: 301 PQRQAQFDNAFNFLEQVKLQFAKEPQIYNQFLDIMKDLKAHNIDTPGVIARVKELFKGHR 360

Query: 185 DLLEEFTHFLP 195
            L+  F  FLP
Sbjct: 361 HLILGFNTFLP 371



 Score = 48.5 bits (114), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 40/69 (57%)

Query: 41  QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDL 100
           +++  + A  Y+K +KD F  +   Y  FLEV+ +++ ++     V  +V ELFK H DL
Sbjct: 530 KQMELDHARNYVKKIKDRFVHQPYIYKQFLEVLHNYQREQQPIHEVYEQVAELFKQHGDL 589

Query: 101 ILGFNTFLP 109
           ++ F  FLP
Sbjct: 590 LIEFRQFLP 598


>gi|15221696|ref|NP_173830.1| paired amphipathic helix repeat-containing protein [Arabidopsis
           thaliana]
 gi|332192374|gb|AEE30495.1| paired amphipathic helix repeat-containing protein [Arabidopsis
           thaliana]
          Length = 196

 Score =  209 bits (533), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 108/160 (67%), Positives = 123/160 (76%), Gaps = 3/160 (1%)

Query: 36  GGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFK 95
           G GGA K TTNDAL YL+AVK  FQ +REKYD+FL++M D+K QRID +GVI R+KEL K
Sbjct: 3   GEGGAHKPTTNDALKYLRAVKAKFQGQREKYDEFLQIMIDYKTQRIDISGVIIRMKELLK 62

Query: 96  GHRDLILGFNTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSF 155
             + L+LGFN FLP GY IT     EQP  KKPVE  EAI+F+NKIKTRFQGDD VYKS 
Sbjct: 63  EQQGLLLGFNAFLPNGYMIT---HHEQPSQKKPVELGEAISFINKIKTRFQGDDRVYKSV 119

Query: 156 LDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLP 195
           LDILNMYRK+ K IT VY+EV  LF DH +LL EFTHFLP
Sbjct: 120 LDILNMYRKDRKPITAVYREVAILFLDHNNLLVEFTHFLP 159


>gi|324500624|gb|ADY40287.1| Paired amphipathic helix protein Sin3a [Ascaris suum]
          Length = 1332

 Score =  209 bits (531), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 195/703 (27%), Positives = 301/703 (42%), Gaps = 145/703 (20%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENK---------SITE--VYQ 174
           + P+EF +AIN+VNKIK RFQ    VY+ FL+IL+ Y++E K         S+TE  VY 
Sbjct: 275 QSPIEFNQAINYVNKIKARFQNRPDVYRQFLEILHCYQQEQKGTRAQGESHSLTESQVYS 334

Query: 175 EVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSG--RNSILRDRSS-AMPTARQVHVDK 231
            V  LF+  PDLL EF+ FLPD+ G  +    PS    N   RD  + A PT        
Sbjct: 335 SVAVLFESEPDLLREFSQFLPDACGFLNKPSAPSSLQTNEPARDSPAKAKPT-------- 386

Query: 232 KERAMASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERRDDHRRERERDDRDFEN 291
                   +DR   V  P P        +                 H+R   +       
Sbjct: 387 ------RGSDRATLVVSPQPVCITKTNATTTQPSPSAPAGSASAAPHKRVAPKST----- 435

Query: 292 DVNRDFSMQRFPHKRKSARKIEDSTAEPLHQGGEGDENFGMHPVSSSYDDKNAMKSMFSQ 351
                       H++ +A++ + +T                + ++  +D   A++S    
Sbjct: 436 ------------HQQTTAKRAKVNTT---------------NVITYDFDVNEALRSATVD 468

Query: 352 ELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFL 409
           +  F +KV+  LRDD  Y  FLRCL LY   I+T++EL  L+   +G   +L+  F   L
Sbjct: 469 DFLFFDKVRKVLRDDAVYNNFLRCLMLYNLNIVTKTELVELIIPFIGNRTNLLKEFKDML 528

Query: 410 ARCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERD---DGVKDRDREAREKD 466
                                   I  S        DR R+R    DG+      +    
Sbjct: 529 G-----------------------INDSTFGGQHHDDRARKRPASADGIP-----SELAS 560

Query: 467 RLDKSVAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQ 526
           ++D S     K +G  +S  S  D Y A+P+          CT                 
Sbjct: 561 QIDYSTC---KRLG--ISYRSLPDSY-ARPV----------CT----------------G 588

Query: 527 RTELGAEVLNDHWVSVTS-GSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTK 585
           RT L   VLND WVS  S  SED S  H +K+QYEE ++R ED+R+ELD+++E      +
Sbjct: 589 RTPLCQSVLNDTWVSFPSWSSEDTSCVHSKKSQYEEFIYRTEDERYELDIVIEVNKAALE 648

Query: 586 RVEELLEKINNNTIKTDGPIRVEDHFTA----LNLRCIERLYGDHGLDVMDVLRKNASLA 641
            +E L  K+     +    +R++    A    L  R ++R+YG+H   +++  +KN S+ 
Sbjct: 649 TLEFLQRKMGRMKKEEVAKLRLDSSLGASSPSLMYRALKRIYGEHASKMLEGAQKNPSVV 708

Query: 642 LPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSA 701
           +P ++ R+ QK  EW   +  FN+VW E   K Y KSLDH++  FKQ D K L +K +  
Sbjct: 709 VPRLIERMHQKDREWRDAQVQFNRVWREQTEKYYAKSLDHQALSFKQNDLKLLRSKMIVH 768

Query: 702 EIKEISEKK--RKEDDVLLAIAAGNRRSIVPHLEFEYS-DPDIHEDLYQLIKYSCGEMCT 758
             + + +++  R+E+        G    I PH  ++Y  D  +  D+  L+ +       
Sbjct: 769 HFETLYDERETRREE--------GATTEIGPHCIYDYPDDMSVLYDVNDLVIHYVKRQPN 820

Query: 759 TEQLDK--VMKIWTTFLEPMLGVPSRPQGAEDTEDVVKAKSHT 799
            ++ +K    K    FL  +  +P+  Q   D ED      H+
Sbjct: 821 IQKEEKGHAKKTLKRFLPELFNIPA--QQMSDDEDSCAEPKHS 861



 Score = 96.3 bits (238), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 44/79 (55%), Positives = 55/79 (69%)

Query: 38  GGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGH 97
           G  ++L   DAL+YL  VK  F    E Y DFL++MKDFK+Q IDT GVI RV  LF+G 
Sbjct: 82  GNTRRLRVEDALSYLDQVKMQFSQAPEVYSDFLDIMKDFKSQTIDTPGVIRRVSRLFRGR 141

Query: 98  RDLILGFNTFLPKGYEITL 116
            +LI+GFNTFLP G+E+ L
Sbjct: 142 PNLIVGFNTFLPPGFEVRL 160



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 5/91 (5%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           +  E+A+++++++K +F     VY  FLDI+  ++ +      V + V  LF+  P+L+ 
Sbjct: 87  LRVEDALSYLDQVKMQFSQAPEVYSDFLDIMKDFKSQTIDTPGVIRRVSRLFRGRPNLIV 146

Query: 189 EFTHFLPDS-----SGAASIHYVPSGRNSIL 214
            F  FLP        GA  +   PSGR  I+
Sbjct: 147 GFNTFLPPGFEVRLEGAKIVISEPSGRTQII 177


>gi|427782991|gb|JAA56947.1| Putative transcriptional co-repressor sin3a protein [Rhipicephalus
           pulchellus]
          Length = 1379

 Score =  209 bits (531), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 143/439 (32%), Positives = 216/439 (49%), Gaps = 78/439 (17%)

Query: 352 ELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFL 409
           E +F +KV+  LR    Y  FLRCL LY +EI++RSEL  LV   LG++P+L   F  F+
Sbjct: 517 EFAFFDKVRRALRGQEVYDNFLRCLILYNQEIVSRSELVHLVTPFLGKFPELFKWFKDFI 576

Query: 410 ARCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRLD 469
              +   ++               IP  V  ++R                          
Sbjct: 577 GYKDLGGQIEP-------------IPNKVVQQER-------------------------- 597

Query: 470 KSVAFVNKDVGPKMSM-YSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRT 528
                ++ D  P M + YSS  +Y A                SYR LPKN + P  S RT
Sbjct: 598 -----ISGD--PSMEIDYSSCKRYGA----------------SYRALPKNIVQPKCSGRT 634

Query: 529 ELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVE 588
            L  EVLND WVS  S SED +F   RK QYEE ++RCED+RFELD+++E+   T + +E
Sbjct: 635 PLCKEVLNDTWVSFPSWSEDSTFVSSRKTQYEEYIYRCEDERFELDVVVETNLSTIRILE 694

Query: 589 ELLEKINNNTIKTDGPIRVEDHF----TALNLRCIERLYGDHGLDVMDVLRKNASLALPV 644
            + +K+   + +     ++ D+       L  + I R+YGD   ++++ L++N ++A+P+
Sbjct: 695 AVQKKLQRMSTEDKQRFQLGDNLGGSSNVLQQQAIRRIYGDKATEIIEGLKRNPTVAVPL 754

Query: 645 ILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIK 704
           +L RLK K+EEW   +  FNKVW E   K Y KSLDH+   FKQ D K L +K+L  EI+
Sbjct: 755 VLRRLKAKEEEWREAQKSFNKVWREQNEKYYLKSLDHQGITFKQNDVKFLRSKSLLNEIE 814

Query: 705 EISEKKRKE-DDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLIKYSCGEMCTTEQLD 763
            I E++R++ ++    +  G      PH+   Y D  I ED   LI +         + D
Sbjct: 815 AIYEERREQMEEGTGEVPTG------PHMSLAYLDRSILEDAANLIIHHVKRQTGINKED 868

Query: 764 --KVMKIWTTFLEPMLGVP 780
             K+ ++   F+  +  +P
Sbjct: 869 KQKIKQLLRQFIPDLFCLP 887



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 44/74 (59%), Positives = 56/74 (75%)

Query: 41  QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDL 100
           Q+L   DAL+YL  VK  F ++ + Y+DFL++MK+FK+Q IDT GVI RV  LFKGH +L
Sbjct: 147 QRLKVEDALSYLDQVKLRFGNQPQVYNDFLDIMKEFKSQSIDTPGVIQRVSNLFKGHPEL 206

Query: 101 ILGFNTFLPKGYEI 114
           I+GFNTFLP GY I
Sbjct: 207 IVGFNTFLPPGYRI 220



 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 13/89 (14%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI-------------TEVY 173
           +PVEF  AIN+VNKIK RFQG   +YK FL+IL+ Y+KE +++             +EVY
Sbjct: 340 QPVEFNHAINYVNKIKNRFQGQPDIYKQFLEILHTYQKEQRNLKEGVQTGAKPLTESEVY 399

Query: 174 QEVEALFQDHPDLLEEFTHFLPDSSGAAS 202
            +V  LFQ+  DLL+EF  FLPD++GA++
Sbjct: 400 AQVAKLFQNQEDLLQEFGQFLPDANGAST 428



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 41/67 (61%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           ++ E+A+++++++K RF     VY  FLDI+  ++ ++     V Q V  LF+ HP+L+ 
Sbjct: 149 LKVEDALSYLDQVKLRFGNQPQVYNDFLDIMKEFKSQSIDTPGVIQRVSNLFKGHPELIV 208

Query: 189 EFTHFLP 195
            F  FLP
Sbjct: 209 GFNTFLP 215



 Score = 45.1 bits (105), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 30/110 (27%), Positives = 50/110 (45%), Gaps = 21/110 (19%)

Query: 21  SRGEP-SGQTQVVGGGGGGG-------AQKLTTNDALAYLKAVKDIFQDKREKYDDFLEV 72
           S G P + Q   V  GG          +Q +  N A+ Y+  +K+ FQ + + Y  FLE+
Sbjct: 312 SHGAPMAPQPPAVASGGQSATAPASQASQPVEFNHAINYVNKIKNRFQGQPDIYKQFLEI 371

Query: 73  MKDFK-------------AQRIDTAGVIARVKELFKGHRDLILGFNTFLP 109
           +  ++             A+ +  + V A+V +LF+   DL+  F  FLP
Sbjct: 372 LHTYQKEQRNLKEGVQTGAKPLTESEVYAQVAKLFQNQEDLLQEFGQFLP 421


>gi|443684085|gb|ELT88117.1| hypothetical protein CAPTEDRAFT_177539 [Capitella teleta]
          Length = 1213

 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 140/437 (32%), Positives = 218/437 (49%), Gaps = 81/437 (18%)

Query: 352 ELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFL 409
           E ++ +KV+  LR++  Y+ FLRCL L+ +E+++RSEL  LV   LG++P+LM G     
Sbjct: 348 EYAYFDKVRKALRNENVYRNFLRCLVLFNQEVVSRSELIQLVNPFLGKHPELMKG----- 402

Query: 410 ARCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRLD 469
                    L D++  K       +P+SV                          K+R+ 
Sbjct: 403 ---------LKDLLGHKESAITDSVPQSVG-------------------------KERIS 428

Query: 470 KSVAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTE 529
              A                         E+D S+C R   SYR LPK Y  P  + R+ 
Sbjct: 429 GEFAM------------------------EIDYSSCRRYGASYRALPKTYPQPRCTGRSP 464

Query: 530 LGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEE 589
           L  EVLND WVS  S SE+ S    +K QYEE ++RCED+RFELD+++E+   T + +E 
Sbjct: 465 LCKEVLNDTWVSFPSWSEE-STGSSKKTQYEEHIYRCEDERFELDIVIEANASTIRILEA 523

Query: 590 LLEKINNNTIKTDGPIRVEDHF----TALNLRCIERLYGDHGLDVMDVLRKNASLALPVI 645
           + +K+N    +     R+++        L+ + I R+YGD   D++D L+KN  +A+P++
Sbjct: 524 VQKKLNRMQAEDAAKFRLDNSLGGNSEVLHRKNISRIYGDKSQDIIDGLKKNPLVAVPLV 583

Query: 646 LTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKE 705
           L RLK K++EW   +  FNKVW E   K Y KSLDH+   FKQ D K + +KAL  EI+ 
Sbjct: 584 LRRLKGKEDEWRDAQRSFNKVWREQNQKYYLKSLDHQGINFKQNDIKQIRSKALLNEIEA 643

Query: 706 ISEKKRKE----DDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLIKYSCGEMCTTEQ 761
           + ++++++     D    +  G      PHL + Y D  + +D+  L+ +      + ++
Sbjct: 644 VFDERQEQASHHTDNSSQVETG------PHLSYVYKDRSVIDDITSLVVHHLKRQSSIQK 697

Query: 762 LDK-VMKIWTTFLEPML 777
            DK  MK+      PML
Sbjct: 698 EDKHKMKVLMHHFLPML 714



 Score = 96.3 bits (238), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 43/73 (58%), Positives = 56/73 (76%)

Query: 42  KLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLI 101
           +L   DAL+YL  VK  F ++ + Y+DFL++MK+FK+Q IDT GVI RV  LF+GH DLI
Sbjct: 30  RLKVEDALSYLDQVKLQFGNQPQVYNDFLDIMKEFKSQSIDTPGVINRVSNLFRGHPDLI 89

Query: 102 LGFNTFLPKGYEI 114
           +GFNTFLP GY+I
Sbjct: 90  VGFNTFLPPGYKI 102



 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 45/90 (50%), Positives = 57/90 (63%), Gaps = 14/90 (15%)

Query: 128 PVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI--------------TEVY 173
           PVEF  AIN+VNKIK RFQG   +YKSFL+IL+ Y+KE ++I              TEVY
Sbjct: 182 PVEFNHAINYVNKIKNRFQGQPDIYKSFLEILHTYQKEQRNIKEGMLSPSCKPLTETEVY 241

Query: 174 QEVEALFQDHPDLLEEFTHFLPDSSGAASI 203
            +V  LFQ+  DLL EF  FLPD++G   +
Sbjct: 242 SQVAKLFQNQEDLLSEFGQFLPDANGGLGL 271



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 40/67 (59%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           ++ E+A+++++++K +F     VY  FLDI+  ++ ++     V   V  LF+ HPDL+ 
Sbjct: 31  LKVEDALSYLDQVKLQFGNQPQVYNDFLDIMKEFKSQSIDTPGVINRVSNLFRGHPDLIV 90

Query: 189 EFTHFLP 195
            F  FLP
Sbjct: 91  GFNTFLP 97


>gi|412993769|emb|CCO14280.1| predicted protein [Bathycoccus prasinos]
          Length = 1306

 Score =  207 bits (527), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 112/207 (54%), Positives = 141/207 (68%), Gaps = 23/207 (11%)

Query: 9   YMNSQIKRPMISSRGEPSGQTQVVGGGGGGGAQ---KLTTNDALAYLKAVKDIFQDKREK 65
           Y N Q   P   +   P G     G G  GGAQ        DAL+YL+ +KD  +D+++ 
Sbjct: 25  YTNRQ---PQTLTNNPPPG----AGIGTNGGAQVDDAARKQDALSYLRHLKDRLKDRKQT 77

Query: 66  YDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLED----- 120
           YD+FLE+MK+FKAQRIDT GVI RVK++FKGHRDLILGFN FLP+G+EI   +ED     
Sbjct: 78  YDEFLEIMKEFKAQRIDTEGVIKRVKKIFKGHRDLILGFNQFLPRGHEIR--VEDIEREE 135

Query: 121 -----EQPPPKKP-VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQ 174
                 Q   +KP VEF  AI++VNKIKTRF  D+ VYK+FL+ILNMYRK  KSI++VY+
Sbjct: 136 REEAKRQAQGQKPQVEFVHAISYVNKIKTRFASDERVYKTFLEILNMYRKNLKSISQVYE 195

Query: 175 EVEALFQDHPDLLEEFTHFLPDSSGAA 201
           EV  LF+ H DLLE+FT+FLPDS+  A
Sbjct: 196 EVAQLFKSHNDLLEQFTYFLPDSTQQA 222



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 108/253 (42%), Positives = 144/253 (56%), Gaps = 56/253 (22%)

Query: 349 FSQELSFCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFN 406
            ++ELS+ +KVK +LR  D Y +F + + L+  ++I++ ELQ LV D++GR+P+L+ G  
Sbjct: 278 LAKELSYFDKVKARLRSKDQYADFCKLITLFNADLISKMELQGLVMDIIGRFPELVTG-- 335

Query: 407 GFLARCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRD----RDRDRERDDGVKDRDREA 462
                                 WNE       + E  D         ++  G+K   RE 
Sbjct: 336 ----------------------WNEF----VARCESMDFEAAEAPAAKKAAGMKLTTREV 369

Query: 463 REKDRLDKSVAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIP 522
                              KM   ++++K+L+KPI ELDLS CERC PSYRLLPKN+   
Sbjct: 370 ------------------TKMKASAAREKFLSKPISELDLSTCERCGPSYRLLPKNFPKM 411

Query: 523 SASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNV 582
            AS RT L  EVLND+WV+VTSGSEDYSFK MRKNQYEE+LFRCEDDR E+DM+LE    
Sbjct: 412 HASTRTPLCKEVLNDNWVAVTSGSEDYSFKAMRKNQYEEALFRCEDDRMEIDMVLE---- 467

Query: 583 TTKRVEELLEKIN 595
           T K   E LEK++
Sbjct: 468 TNKSAIEALEKVH 480



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 82/209 (39%), Positives = 125/209 (59%), Gaps = 9/209 (4%)

Query: 608 EDHFTALNLRCIERLYGDHGLDVMDVLRKNASLA-LPVILTRLKQKQEEWARCRSDFNKV 666
           E   + + LR +ER+YGD G + M  L  NA  A +PV+L RLKQK EEW   +++    
Sbjct: 584 EGTVSTIVLRAVERIYGDRGRE-MRFLTMNAPWATIPVVLRRLKQKSEEWQILKTEMLPT 642

Query: 667 WAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRR 726
           W ++ +KNY+KSLDHRSFYFKQ D K+L  K ++ EIKE+S+KK+  DD + A A+ +  
Sbjct: 643 WNDVCAKNYNKSLDHRSFYFKQADKKNLSGKGMTQEIKEVSDKKKTADDAIGARASKSPG 702

Query: 727 SIVPHLEFEYSDPDIHEDLYQLIKYSCGEMCTTEQLDKVMKIWTTFLEPMLGVPSRPQGA 786
              P L FEY++ ++H+D+Y + ++S  EM + E  +KVM  +  FLEP   +       
Sbjct: 703 E-SPDLNFEYAERNVHDDVYAVTRFSAREMMSGEPANKVMTFYRDFLEPFFKI------K 755

Query: 787 EDTEDVVKAKSHTVKSRAASVGDSDGSPD 815
            D ED  K  +    ++A    +++ SP+
Sbjct: 756 RDNEDDFKDMTAENCAKAVKTAEANASPN 784


>gi|302830650|ref|XP_002946891.1| hypothetical protein VOLCADRAFT_56211 [Volvox carteri f.
           nagariensis]
 gi|300267935|gb|EFJ52117.1| hypothetical protein VOLCADRAFT_56211 [Volvox carteri f.
           nagariensis]
          Length = 573

 Score =  207 bits (526), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 149/449 (33%), Positives = 233/449 (51%), Gaps = 61/449 (13%)

Query: 349 FSQELSFCEKVKDKLRDD---YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGF 405
           F Q +++  K+K +  +D   Y+ FL  L++Y K   T +++   V  L   +PDL++ F
Sbjct: 126 FDQAINYVNKIKTRFANDERVYKAFLEILNMYRKGQKTINQVYDEVAVLFRSHPDLLEEF 185

Query: 406 NGFLARCEKSEELLA-----DVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDR 460
             FL    +S  + A     ++    S+ +   + + V  ++ D    ++ D G   R +
Sbjct: 186 TYFLPDGTQSGAVGAARGRSNLRVSSSVPHWQLVARPVSTKNPDITMHKDDDMGRSGRPQ 245

Query: 461 EARE-------KDRLDKSVAFVNKDVGPKMSMYS----SKDKYLA--------------- 494
            A+E       K RL    A+   D    +SMY+    S+ + L                
Sbjct: 246 LAKELVYFERAKQRLRNKDAY--NDFLKCLSMYTQEIISRQELLQLLNDIIGRFPDLMVG 303

Query: 495 -----KPIQELDLSNC--------------ERCTPSYRLLPKNYLIPSASQRTELGAEVL 535
                + + E   + C              +R TPSY  +P  Y   ++S RT L   VL
Sbjct: 304 CCSLREGVWECRFTMCHHEKQLCEHRLLPLQRVTPSYVKMPPGYPHLASSGRTPLAESVL 363

Query: 536 NDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKIN 595
           N  +V+V +GSEDYSFK MRKNQYEESLFRCEDDR+E +M +E    T KR++ + +KI 
Sbjct: 364 NSEFVNVITGSEDYSFKLMRKNQYEESLFRCEDDRYEFEMAIERNVATMKRLKPIAQKIA 423

Query: 596 NNTIKTDGPIRVEDHFTA-LNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQE 654
               +     + ++     ++ R IERLY D G  ++D+LRKN  +A+PV++ RL+QK E
Sbjct: 424 TMAPEERVVFKFDESILGPVHWRSIERLYADQGPVLIDLLRKNPVVAIPVVVARLEQKDE 483

Query: 655 EWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKED 714
           EW R R +  +VW  IY  NYHKSLDHRSFYFKQ + ++L  K L AE++E ++++R+++
Sbjct: 484 EWRRVRVEMTRVWKRIYEANYHKSLDHRSFYFKQAEKRALLPKTLVAEVREAADRRRQDE 543

Query: 715 DVLLAIAAGNRRSIVPH-----LEFEYSD 738
             L A++   R   V       L ++YS+
Sbjct: 544 RSLRALSLAYRYDAVLESSTGDLTYDYSE 572



 Score =  202 bits (514), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 117/263 (44%), Positives = 158/263 (60%), Gaps = 38/263 (14%)

Query: 39  GAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHR 98
           G  KLTTNDAL+YL+ VK+ F D+++ YD FLE+MK+FKA +IDT GVI +VK+LFKGHR
Sbjct: 2   GGTKLTTNDALSYLREVKNRFADQKDVYDTFLEIMKEFKAAKIDTTGVIHKVKQLFKGHR 61

Query: 99  DLILGFNTFLPK---GYEITLPLEDEQPPP-----------------------------K 126
           +LILGFNTFLP+    +  +L        P                             K
Sbjct: 62  ELILGFNTFLPRVRSSHATSLAASLLTVGPIFRDTRLSFNASRTMRRRRTRLAEICHGSK 121

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDL 186
           +PVEF++AIN+VNKIKTRF  D+ VYK+FL+ILNMYRK  K+I +VY EV  LF+ HPDL
Sbjct: 122 QPVEFDQAINYVNKIKTRFANDERVYKAFLEILNMYRKGQKTINQVYDEVAVLFRSHPDL 181

Query: 187 LEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQVH--VDKKERAMASHADRDL 244
           LEEFT+FLPD + + ++     GR+++    SS++P  + V   V  K   +  H D D+
Sbjct: 182 LEEFTYFLPDGTQSGAVG-AARGRSNL--RVSSSVPHWQLVARPVSTKNPDITMHKDDDM 238

Query: 245 S-VDRPDPDHDRVLLKSDKDQRR 266
               RP    + V  +  K + R
Sbjct: 239 GRSGRPQLAKELVYFERAKQRLR 261



 Score = 48.9 bits (115), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 44/185 (23%), Positives = 72/185 (38%), Gaps = 37/185 (20%)

Query: 38  GGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGH 97
           G  Q +  + A+ Y+  +K  F +    Y  FLE++  ++  +     V   V  LF+ H
Sbjct: 119 GSKQPVEFDQAINYVNKIKTRFANDERVYKAFLEILNMYRKGQKTINQVYDEVAVLFRSH 178

Query: 98  RDLILGFNTFLPKGYE-----------------------------------ITLPLEDEQ 122
            DL+  F  FLP G +                                   IT+  +D+ 
Sbjct: 179 PDLLEEFTYFLPDGTQSGAVGAARGRSNLRVSSSVPHWQLVARPVSTKNPDITMHKDDDM 238

Query: 123 PPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQD 182
               +P   +E + F  + K R +  D  Y  FL  L+MY +E  S  E+ Q +  +   
Sbjct: 239 GRSGRPQLAKELVYF-ERAKQRLRNKD-AYNDFLKCLSMYTQEIISRQELLQLLNDIIGR 296

Query: 183 HPDLL 187
            PDL+
Sbjct: 297 FPDLM 301


>gi|157106642|ref|XP_001649417.1| sin3b [Aedes aegypti]
 gi|108868808|gb|EAT33033.1| AAEL014711-PA [Aedes aegypti]
          Length = 1493

 Score =  206 bits (524), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 131/402 (32%), Positives = 202/402 (50%), Gaps = 73/402 (18%)

Query: 354  SFCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLAR 411
            +F +KV+  LR  D Y+ FLRCL L+ +EI+++SELQ+LV   L R+PDL+  F  FL  
Sbjct: 682  AFFDKVRKALRSPDVYENFLRCLTLFNQEIVSKSELQTLVTPFLSRFPDLLKWFQDFLG- 740

Query: 412  CEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRLDKS 471
                                  +P+ V +    R +DR + +   D D            
Sbjct: 741  -------------------PSTVPECVPLASAQR-QDRSQSELATDID------------ 768

Query: 472  VAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELG 531
                                          LS C+R   SY  LPK++     S RT L 
Sbjct: 769  ------------------------------LSTCKRLGASYCALPKSHENVKCSGRTALC 798

Query: 532  AEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELL 591
             +VLND WVS  + +ED +F   RK QYEE ++RCED+RFELD+++E+ + T + +E + 
Sbjct: 799  RDVLNDTWVSFPTWAEDSTFVTSRKTQYEEFIYRCEDERFELDVVIETNSATIRVLEGVQ 858

Query: 592  EKINNNTIKTDGPIRVEDHF----TALNLRCIERLYGDHGLDVMDVLRKNASLALPVILT 647
            +K++  +       R+++        ++ R ++R+YGD   D++  LRKN  +A+PV+L 
Sbjct: 859  KKLSRMSQDEVSRFRLDECLGGTSATIHQRALKRIYGDKANDIIQGLRKNPVVAVPVVLR 918

Query: 648  RLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEIS 707
            RLK K+EEW   +  FNK W E   K Y KSLDH+   FKQ D K+L +K+L  EI+ + 
Sbjct: 919  RLKAKEEEWREAQKGFNKQWREQNEKYYLKSLDHQGINFKQNDIKALRSKSLFNEIETLF 978

Query: 708  EKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLI 749
            +++ ++ +      + N  +  PHL   Y D  I +D   L+
Sbjct: 979  DERHEQTE----DGSSNPLTSGPHLVLPYKDKTILDDAANLL 1016



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 44/80 (55%), Positives = 59/80 (73%)

Query: 42  KLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLI 101
           +L   DAL+YL  VK  F ++ + Y+DFL++MK+FK+Q IDT GVI RV  LFKGH +LI
Sbjct: 188 RLKVEDALSYLDQVKFRFGNQPQVYNDFLDIMKEFKSQSIDTPGVIQRVSNLFKGHPELI 247

Query: 102 LGFNTFLPKGYEITLPLEDE 121
           +GFNTFLP GY+I +   D+
Sbjct: 248 VGFNTFLPPGYKIEVQANDQ 267



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/97 (42%), Positives = 52/97 (53%), Gaps = 17/97 (17%)

Query: 125 PKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENK----------------- 167
           P +PVEF  AI +VNKIK RF      YK FL+IL+ Y+KE K                 
Sbjct: 428 PNQPVEFNHAITYVNKIKNRFHSQPEKYKRFLEILHTYQKEQKIHKEGTQGACNSGAKQL 487

Query: 168 SITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIH 204
           +  EVY +V  LF +  DLL EF  FLPD++  A +H
Sbjct: 488 TEAEVYTQVAKLFDNQEDLLREFGQFLPDATSHAPMH 524



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 41/67 (61%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           ++ E+A+++++++K RF     VY  FLDI+  ++ ++     V Q V  LF+ HP+L+ 
Sbjct: 189 LKVEDALSYLDQVKFRFGNQPQVYNDFLDIMKEFKSQSIDTPGVIQRVSNLFKGHPELIV 248

Query: 189 EFTHFLP 195
            F  FLP
Sbjct: 249 GFNTFLP 255



 Score = 43.5 bits (101), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 17/92 (18%)

Query: 35  GGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFK----------------- 77
           G     Q +  N A+ Y+  +K+ F  + EKY  FLE++  ++                 
Sbjct: 424 GNAQPNQPVEFNHAITYVNKIKNRFHSQPEKYKRFLEILHTYQKEQKIHKEGTQGACNSG 483

Query: 78  AQRIDTAGVIARVKELFKGHRDLILGFNTFLP 109
           A+++  A V  +V +LF    DL+  F  FLP
Sbjct: 484 AKQLTEAEVYTQVAKLFDNQEDLLREFGQFLP 515


>gi|195175409|ref|XP_002028447.1| GL21286 [Drosophila persimilis]
 gi|194118074|gb|EDW40117.1| GL21286 [Drosophila persimilis]
          Length = 2123

 Score =  202 bits (514), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 135/404 (33%), Positives = 206/404 (50%), Gaps = 55/404 (13%)

Query: 354  SFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLAR 411
            +F +KV+  LR    Y  FLRCL L+ +EI++++EL  LV   L ++PDL+  F+ FL  
Sbjct: 974  AFFDKVRKALRSPEVYDNFLRCLTLFNQEIVSKAELLGLVSPFLMKFPDLLRWFSDFLGP 1033

Query: 412  CEKSEEL-LADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRLDK 470
               S    L D M   +   +G    S        DRDRER                   
Sbjct: 1034 PIGSGGAGLIDGMPLAATQRQGGSSNS-----SSHDRDRERGGN---------------- 1072

Query: 471  SVAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTEL 530
                      P  + Y          +Q++DLS C+R   SY  LP++ +    S RT L
Sbjct: 1073 ---------HPTAAEY----------VQDVDLSACKRLGASYCALPQSSVPKKCSGRTAL 1113

Query: 531  GAEVLNDHWVSV-TSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEE 589
              EVLND WVS  T  SED +F   RK Q+EE+++R ED+RFELD+++E  + T + +E 
Sbjct: 1114 CREVLNDKWVSFPTWASEDSTFVTSRKTQFEETIYRTEDERFELDLVIEVNSATIQVLEG 1173

Query: 590  LLEKINNNTIKTDGPIRVEDHFTA----LNLRCIERLYGDHGLDVMDVLRKNASLALPVI 645
            + +K++  + +      ++D        ++ R I R+YGD   +++  ++KN S+A+P+I
Sbjct: 1174 VNKKMSRMSSEELAKFHLDDTLGGTSQTIHQRAIHRIYGDKSGEIIQGMKKNPSVAVPII 1233

Query: 646  LTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKE 705
            L RLK K+EEW   +  FNK W E   K Y KSLDH++  FK  D K+L +K+L  EI+ 
Sbjct: 1234 LKRLKVKEEEWRDAQKGFNKQWREQNEKYYLKSLDHQAINFKPNDMKALRSKSLFNEIET 1293

Query: 706  ISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLI 749
            + +++  ++D  +  A        PHL   Y D  I +D   L+
Sbjct: 1294 LYDERHDQEDDAMEQAG-------PHLVLPYKDKTILDDAANLL 1330



 Score = 93.2 bits (230), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 44/97 (45%), Positives = 60/97 (61%), Gaps = 9/97 (9%)

Query: 42  KLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLI 101
           +L   DAL+YL  VK  + D+ + Y++FL++MK+FK+  IDT GVI RV  LFKGH +LI
Sbjct: 300 RLKVEDALSYLDQVKYQYADQPQIYNNFLDIMKEFKSHCIDTPGVIERVSTLFKGHTELI 359

Query: 102 LGFNTFLPKGYEI---------TLPLEDEQPPPKKPV 129
            GFN FLP GY+I         ++P+     PP  P 
Sbjct: 360 YGFNMFLPPGYKIEIHSDALGCSVPVVSMPSPPGAPT 396



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 39/85 (45%), Positives = 48/85 (56%), Gaps = 13/85 (15%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI-------------TEVY 173
           +PVEF  AI +VNKIK RFQ     YK FL+IL+ Y+KE K +              EVY
Sbjct: 597 QPVEFNHAITYVNKIKNRFQNQPAKYKKFLEILHAYQKEQKVMKEGSLNQGKMLTEQEVY 656

Query: 174 QEVEALFQDHPDLLEEFTHFLPDSS 198
            +V  LF    DLL EF  FLPD++
Sbjct: 657 TQVAKLFGQDEDLLREFGQFLPDAT 681



 Score = 47.0 bits (110), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 18/67 (26%), Positives = 39/67 (58%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           ++ E+A+++++++K ++     +Y +FLDI+  ++        V + V  LF+ H +L+ 
Sbjct: 301 LKVEDALSYLDQVKYQYADQPQIYNNFLDIMKEFKSHCIDTPGVIERVSTLFKGHTELIY 360

Query: 189 EFTHFLP 195
            F  FLP
Sbjct: 361 GFNMFLP 367



 Score = 43.1 bits (100), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 13/92 (14%)

Query: 31  VVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDF-KAQRIDTAG---- 85
           ++ G  G   Q +  N A+ Y+  +K+ FQ++  KY  FLE++  + K Q++   G    
Sbjct: 587 ILLGETGQQNQPVEFNHAITYVNKIKNRFQNQPAKYKKFLEILHAYQKEQKVMKEGSLNQ 646

Query: 86  --------VIARVKELFKGHRDLILGFNTFLP 109
                   V  +V +LF    DL+  F  FLP
Sbjct: 647 GKMLTEQEVYTQVAKLFGQDEDLLREFGQFLP 678


>gi|328713803|ref|XP_003245181.1| PREDICTED: paired amphipathic helix protein Sin3b-like
           [Acyrthosiphon pisum]
          Length = 1197

 Score =  202 bits (514), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 135/405 (33%), Positives = 194/405 (47%), Gaps = 63/405 (15%)

Query: 367 YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLARCEKSEELLADVMSKK 426
           Y +FLRCL LY  EII++SEL +LV   LG+Y +L   F  F+   EKS           
Sbjct: 547 YDDFLRCLVLYYTEIISKSELLNLVQPFLGKYSELFRRFKDFIGTSEKSN---------- 596

Query: 427 SLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRLDKSVAFVNKDVGPKMSMY 486
              N   +P   K+             G+          +R D+S   +  D+       
Sbjct: 597 ---NAAAVPTENKL------------CGLPHFSLLDPGSNRQDRSAGDLPTDI------- 634

Query: 487 SSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGS 546
                         D S C+R   SY  +P +YL P  S RT++  EVLND WVS  + S
Sbjct: 635 --------------DYSICKRLGASYCAVPSDYLTPKCSGRTKMCYEVLNDTWVSFPTWS 680

Query: 547 EDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIR 606
           E+ SF   RK QYEE + RCED+RFELD+++E        +EEL  + N  T +     +
Sbjct: 681 EESSFATSRKTQYEEYMHRCEDERFELDLVMEVNLAAIYCLEELTRRFNRMTPEELSKFK 740

Query: 607 VED-HF------TALNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARC 659
           ++D  F         N R I+RLYGD   D+++ L+KN   A+P++L RLK K EEW   
Sbjct: 741 MDDCSFGSDTISMTTNRRAIKRLYGDKTTDILEGLQKNPLTAVPIVLKRLKSKNEEWKIA 800

Query: 660 RSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLA 719
           R+ FN++W     K Y KSLDH+   FKQ D K L +K+L  EI+ + +++ +  D +  
Sbjct: 801 RNTFNEIWKSQNEKYYLKSLDHQGVNFKQSDMKFLRSKSLLNEIEALYDERNEHSDTITG 860

Query: 720 IAAGNRRSIVPHLEFEYSDPDIHEDLYQLIKYSCGEMCTTEQLDK 764
                     PH+ F Y D  I +D   L+ +      +  + DK
Sbjct: 861 ----------PHMVFSYIDKSIIDDAANLLIHHVKRQASINKEDK 895



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 43/75 (57%), Positives = 57/75 (76%)

Query: 42  KLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLI 101
           +L   DAL+YL  VK  F ++ + Y+DFL++MK+FK+Q IDT GVI RV  LFKGH +LI
Sbjct: 141 RLKVEDALSYLDQVKYKFSNQPQVYNDFLDIMKEFKSQSIDTPGVITRVSNLFKGHPELI 200

Query: 102 LGFNTFLPKGYEITL 116
           +GFNTFLP GY+I +
Sbjct: 201 VGFNTFLPPGYKIEI 215



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 47/106 (44%), Positives = 62/106 (58%), Gaps = 18/106 (16%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKEN-----------KSIT--EVY 173
           +PVEF  AIN+VNKIK RFQG    YK FL+IL+ Y+KE            K++T  EVY
Sbjct: 344 QPVEFNHAINYVNKIKNRFQGQPEKYKRFLEILHTYQKEQKTHKDNVPVAEKTLTEAEVY 403

Query: 174 QEVEALFQDHPDLLEEFTHFLPDSSG-----AASIHYVPSGRNSIL 214
           Q+V  LF++  DLL EF  FLPD+       AA    VP  + +++
Sbjct: 404 QQVAKLFENQDDLLLEFGQFLPDAKSPDAKQAAEAIIVPPKKTTVV 449



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 40/67 (59%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           ++ E+A+++++++K +F     VY  FLDI+  ++ ++     V   V  LF+ HP+L+ 
Sbjct: 142 LKVEDALSYLDQVKYKFSNQPQVYNDFLDIMKEFKSQSIDTPGVITRVSNLFKGHPELIV 201

Query: 189 EFTHFLP 195
            F  FLP
Sbjct: 202 GFNTFLP 208



 Score = 45.8 bits (107), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 13/82 (15%)

Query: 41  QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQR-------------IDTAGVI 87
           Q +  N A+ Y+  +K+ FQ + EKY  FLE++  ++ ++             +  A V 
Sbjct: 344 QPVEFNHAINYVNKIKNRFQGQPEKYKRFLEILHTYQKEQKTHKDNVPVAEKTLTEAEVY 403

Query: 88  ARVKELFKGHRDLILGFNTFLP 109
            +V +LF+   DL+L F  FLP
Sbjct: 404 QQVAKLFENQDDLLLEFGQFLP 425


>gi|198459531|ref|XP_001361414.2| GA21341 [Drosophila pseudoobscura pseudoobscura]
 gi|198136721|gb|EAL25992.2| GA21341 [Drosophila pseudoobscura pseudoobscura]
          Length = 2127

 Score =  202 bits (514), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 135/404 (33%), Positives = 206/404 (50%), Gaps = 55/404 (13%)

Query: 354  SFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLAR 411
            +F +KV+  LR    Y  FLRCL L+ +EI++++EL  LV   L ++PDL+  F+ FL  
Sbjct: 976  AFFDKVRKALRSPEVYDNFLRCLTLFNQEIVSKAELLGLVSPFLMKFPDLLRWFSDFLGP 1035

Query: 412  CEKSEEL-LADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRLDK 470
               S    L D M   +   +G    S        DRDRER                   
Sbjct: 1036 PIGSGGAGLIDGMPLAATQRQGGSSNS-----SSHDRDRERGGN---------------- 1074

Query: 471  SVAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTEL 530
                      P  + Y          +Q++DLS C+R   SY  LP++ +    S RT L
Sbjct: 1075 ---------HPTAAEY----------VQDVDLSACKRLGASYCALPQSSVPKKCSGRTAL 1115

Query: 531  GAEVLNDHWVSV-TSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEE 589
              EVLND WVS  T  SED +F   RK Q+EE+++R ED+RFELD+++E  + T + +E 
Sbjct: 1116 CREVLNDKWVSFPTWASEDSTFVTSRKTQFEETIYRTEDERFELDLVIEVNSATIQVLEG 1175

Query: 590  LLEKINNNTIKTDGPIRVEDHF----TALNLRCIERLYGDHGLDVMDVLRKNASLALPVI 645
            + +K++  + +      ++D        ++ R I R+YGD   +++  ++KN S+A+P+I
Sbjct: 1176 VNKKMSRMSSEELAKFHLDDTLGGTSQTIHQRAIHRIYGDKSGEIIQGMKKNPSVAVPII 1235

Query: 646  LTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKE 705
            L RLK K+EEW   +  FNK W E   K Y KSLDH++  FK  D K+L +K+L  EI+ 
Sbjct: 1236 LKRLKVKEEEWRDAQKGFNKQWREQNEKYYLKSLDHQAINFKPNDMKALRSKSLFNEIET 1295

Query: 706  ISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLI 749
            + +++  ++D  +  A        PHL   Y D  I +D   L+
Sbjct: 1296 LYDERHDQEDDAMEQAG-------PHLVLPYKDKTILDDAANLL 1332



 Score = 93.2 bits (230), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 44/97 (45%), Positives = 60/97 (61%), Gaps = 9/97 (9%)

Query: 42  KLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLI 101
           +L   DAL+YL  VK  + D+ + Y++FL++MK+FK+  IDT GVI RV  LFKGH +LI
Sbjct: 302 RLKVEDALSYLDQVKYQYADQPQIYNNFLDIMKEFKSHCIDTPGVIERVSTLFKGHTELI 361

Query: 102 LGFNTFLPKGYEI---------TLPLEDEQPPPKKPV 129
            GFN FLP GY+I         ++P+     PP  P 
Sbjct: 362 YGFNMFLPPGYKIEIHSDALGCSVPVVSMPSPPGAPT 398



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 39/85 (45%), Positives = 48/85 (56%), Gaps = 13/85 (15%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI-------------TEVY 173
           +PVEF  AI +VNKIK RFQ     YK FL+IL+ Y+KE K +              EVY
Sbjct: 599 QPVEFNHAITYVNKIKNRFQNQPAKYKKFLEILHAYQKEQKVMKEGSLNQGKMLTEQEVY 658

Query: 174 QEVEALFQDHPDLLEEFTHFLPDSS 198
            +V  LF    DLL EF  FLPD++
Sbjct: 659 TQVAKLFGQDEDLLREFGQFLPDAT 683



 Score = 47.0 bits (110), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 18/67 (26%), Positives = 39/67 (58%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           ++ E+A+++++++K ++     +Y +FLDI+  ++        V + V  LF+ H +L+ 
Sbjct: 303 LKVEDALSYLDQVKYQYADQPQIYNNFLDIMKEFKSHCIDTPGVIERVSTLFKGHTELIY 362

Query: 189 EFTHFLP 195
            F  FLP
Sbjct: 363 GFNMFLP 369



 Score = 43.1 bits (100), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 13/92 (14%)

Query: 31  VVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDF-KAQRIDTAG---- 85
           ++ G  G   Q +  N A+ Y+  +K+ FQ++  KY  FLE++  + K Q++   G    
Sbjct: 589 ILLGETGQQNQPVEFNHAITYVNKIKNRFQNQPAKYKKFLEILHAYQKEQKVMKEGSLNQ 648

Query: 86  --------VIARVKELFKGHRDLILGFNTFLP 109
                   V  +V +LF    DL+  F  FLP
Sbjct: 649 GKMLTEQEVYTQVAKLFGQDEDLLREFGQFLP 680


>gi|195121680|ref|XP_002005348.1| GI20429 [Drosophila mojavensis]
 gi|193910416|gb|EDW09283.1| GI20429 [Drosophila mojavensis]
          Length = 2102

 Score =  202 bits (514), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 138/407 (33%), Positives = 208/407 (51%), Gaps = 58/407 (14%)

Query: 352  ELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFL 409
            +++F +KV+  LR    Y  FLRCL L+ +EI++++EL  LV   L ++PDL+  F  FL
Sbjct: 949  DVAFFDKVRKALRSPQVYDNFLRCLTLFNQEIVSKTELLGLVSPFLMKFPDLLRWFTDFL 1008

Query: 410  ARCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRLD 469
                                     P S +V              +    R+       D
Sbjct: 1009 GP-----------------------PSSGQVGGAAGAGGLIDGLPLAATQRQGSNSSSHD 1045

Query: 470  KSVAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTE 529
            ++ +  + D                  +Q++DLS C+R   SY  LP++ +    S RT 
Sbjct: 1046 RASSHQSTDY-----------------VQDVDLSLCKRLGASYCALPQSTVPKKCSGRTA 1088

Query: 530  LGAEVLNDHWVSV-TSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRV- 587
            L  EVLND WVS  T  SED +F   RK Q+EE+++R ED+RFELD+++E VN TT RV 
Sbjct: 1089 LCREVLNDKWVSFPTWASEDSTFVTSRKTQFEETIYRTEDERFELDLVIE-VNSTTIRVL 1147

Query: 588  EELLEKINNNTIKTDGPIRVEDHF----TALNLRCIERLYGDHGLDVMDVLRKNASLALP 643
            E + +K++  + +      ++DH       ++ R I R+YGD   +++  L+KN S+A+P
Sbjct: 1148 ENVQKKMSRMSPEELAKFHLDDHLGGTSQTIHQRAIHRIYGDKSGEIIQGLKKNPSVAVP 1207

Query: 644  VILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEI 703
            ++L RLK K+EEW   + +FNK W E   K Y KSLDH++  FK  D K+L +K+L  EI
Sbjct: 1208 IVLKRLKVKEEEWRDAQKNFNKQWREQNEKYYLKSLDHQAINFKPNDMKALRSKSLFNEI 1267

Query: 704  KEI-SEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLI 749
            + +  E+   EDD +   AAG      PHL   Y D  I +D   L+
Sbjct: 1268 ETLYDERHDAEDDSME--AAG------PHLVLPYKDKTILDDAANLL 1306



 Score = 92.8 bits (229), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 44/96 (45%), Positives = 60/96 (62%), Gaps = 9/96 (9%)

Query: 42  KLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLI 101
           +L   DAL+YL  VK  + D+ + Y++FL++MK+FK+  IDT GVI RV  LFKGH +LI
Sbjct: 261 RLKVEDALSYLDQVKYQYADQPQIYNNFLDIMKEFKSHCIDTPGVIERVSTLFKGHTELI 320

Query: 102 LGFNTFLPKGYEI---------TLPLEDEQPPPKKP 128
            GFN FLP GY+I         ++P+     PP  P
Sbjct: 321 YGFNMFLPPGYKIEIHSDALGCSVPVVSMPSPPGAP 356



 Score = 73.2 bits (178), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 39/89 (43%), Positives = 48/89 (53%), Gaps = 17/89 (19%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI----------------- 169
           +PVEF  AI +VNKIK RFQ     YK FL+IL+ Y+KE K +                 
Sbjct: 561 QPVEFNHAITYVNKIKNRFQSQPAKYKKFLEILHAYQKEQKVMKEGSSGSGLNQGKMLTE 620

Query: 170 TEVYQEVEALFQDHPDLLEEFTHFLPDSS 198
            EVY +V  LF    DLL EF  FLPD++
Sbjct: 621 QEVYTQVAKLFGQDEDLLREFGQFLPDAT 649



 Score = 46.6 bits (109), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 18/67 (26%), Positives = 39/67 (58%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           ++ E+A+++++++K ++     +Y +FLDI+  ++        V + V  LF+ H +L+ 
Sbjct: 262 LKVEDALSYLDQVKYQYADQPQIYNNFLDIMKEFKSHCIDTPGVIERVSTLFKGHTELIY 321

Query: 189 EFTHFLP 195
            F  FLP
Sbjct: 322 GFNMFLP 328



 Score = 45.4 bits (106), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 43/92 (46%), Gaps = 16/92 (17%)

Query: 123  PPPKKP------VEFEEA--------INFVNKIKTRFQGDDHVYKSFLDILNMYRKENKS 168
            PP K+P      V F EA        + F +K++   +    VY +FL  L ++ +E  S
Sbjct: 924  PPAKRPKPYCRDVSFSEASRKCTIADVAFFDKVRKALR-SPQVYDNFLRCLTLFNQEIVS 982

Query: 169  ITEVYQEVEALFQDHPDLLEEFTHFL-PDSSG 199
             TE+   V       PDLL  FT FL P SSG
Sbjct: 983  KTELLGLVSPFLMKFPDLLRWFTDFLGPPSSG 1014


>gi|395501313|ref|XP_003755040.1| PREDICTED: paired amphipathic helix protein Sin3a [Sarcophilus
           harrisii]
          Length = 1274

 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 138/442 (31%), Positives = 216/442 (48%), Gaps = 80/442 (18%)

Query: 344 AMKSMFSQELSFCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDL 401
           A K     E  F EKV+  LR  + Y+ FLRCL ++ +E+I+R              P+L
Sbjct: 456 ASKHGVGTESLFFEKVRKALRSTEAYENFLRCLVIFNQEVISR--------------PEL 501

Query: 402 MDGFNGFLARCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDRE 461
           +   + FL +  +      + +  K         +SV +E   ++R  E           
Sbjct: 502 VQLVSPFLGKFPELFTWFKNFLGYK---------ESVHLETFPKERATE----------- 541

Query: 462 AREKDRLDKSVAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLI 521
                             G  M               E+D ++C+R   SYR LPK+Y  
Sbjct: 542 ------------------GIAM---------------EIDYASCKRLGSSYRALPKSYQQ 568

Query: 522 PSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVN 581
           P  + RT L  EVLND WVS  S SED +F   +K QYEE ++RCED+RFELD++LE+  
Sbjct: 569 PKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVSSKKTQYEEHIYRCEDERFELDVVLETNL 628

Query: 582 VTTKRVEELLEKINNNTIKTDGPIRVEDHF----TALNLRCIERLYGDHGLDVMDVLRKN 637
            T + +E + +K++  + +     R+++        ++ + ++R+Y D   D++D LRKN
Sbjct: 629 ATIRVLETIQKKLSRLSAEEQAKFRLDNTLGGSSEVIHRKALQRIYADKAADIIDGLRKN 688

Query: 638 ASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAK 697
            S+A+P++L RLK K+EEW   +  FNKVW E   K Y KSLDH+   FKQ D+K L +K
Sbjct: 689 PSIAVPIVLKRLKMKEEEWREAQRGFNKVWREQNEKYYLKSLDHQGINFKQNDTKVLRSK 748

Query: 698 ALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLIKYSCGEMC 757
           +L  EI+ I ++++++     A    +   + PHL   Y D  I ED   LI +      
Sbjct: 749 SLLNEIESIYDERQEQ-----ATEDNSGVPVGPHLSLAYEDKQILEDAAALIIHHVKRQT 803

Query: 758 TTEQLD--KVMKIWTTFLEPML 777
             ++ D  K+ +I   F+  +L
Sbjct: 804 GIQKEDKYKIKQIMHHFIPDLL 825



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 50/103 (48%), Positives = 67/103 (65%), Gaps = 2/103 (1%)

Query: 18  MISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFK 77
           ++ S   P+     V G      Q+L   DAL+YL  VK  F  + + Y+DFL++MK+FK
Sbjct: 98  VVQSHAHPTPPAAPVQGQQQ--FQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFK 155

Query: 78  AQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLED 120
           +Q IDT GVI+RV +LFKGH DLI+GFNTFLP GY+I +   D
Sbjct: 156 SQSIDTPGVISRVSQLFKGHPDLIMGFNTFLPPGYKIEVQTND 198



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/88 (45%), Positives = 55/88 (62%), Gaps = 13/88 (14%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI-------------TEVY 173
           +PVEF  AIN+VNKIK RFQG   +YK+FL+IL+ Y+KE ++               EVY
Sbjct: 300 QPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVY 359

Query: 174 QEVEALFQDHPDLLEEFTHFLPDSSGAA 201
            +V  LF++  DLL EF  FLPD++ + 
Sbjct: 360 AQVARLFKNQEDLLSEFGQFLPDANSSV 387



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 9/81 (11%)

Query: 124 PPKKPVE---------FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQ 174
           PP  PV+          E+A+++++++K +F     VY  FLDI+  ++ ++     V  
Sbjct: 107 PPAAPVQGQQQFQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVIS 166

Query: 175 EVEALFQDHPDLLEEFTHFLP 195
            V  LF+ HPDL+  F  FLP
Sbjct: 167 RVSQLFKGHPDLIMGFNTFLP 187


>gi|195455158|ref|XP_002074586.1| GK23082 [Drosophila willistoni]
 gi|194170671|gb|EDW85572.1| GK23082 [Drosophila willistoni]
          Length = 2111

 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 131/404 (32%), Positives = 205/404 (50%), Gaps = 60/404 (14%)

Query: 354  SFCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLAR 411
            +F +KV+  LR  D Y  FLRCL L+ +EI++++EL  LV   L ++PDL+  F  FL  
Sbjct: 967  AFFDKVRKALRSPDVYDNFLRCLTLFNQEIVSKTELLGLVSPFLTKFPDLLRWFTDFLGP 1026

Query: 412  CEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRLDKS 471
                                   P S  ++       ++R  G    +  A         
Sbjct: 1027 TVGG-------------------PVSGLIDGLPLAATQQRQGGSNSSNDRA--------- 1058

Query: 472  VAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELG 531
                         ++ S   Y    +Q++DLS C+R   SY  LP + +    S RT L 
Sbjct: 1059 ------------GIHQSSADY----VQDVDLSLCKRLGASYCALPPSTVPKKCSGRTALC 1102

Query: 532  AEVLNDHWVSV-TSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEEL 590
             EVLND WVS  T  SED +F   RK Q+EE+++R ED+RFELD+++E  + T + +E +
Sbjct: 1103 KEVLNDKWVSFPTWASEDSTFVTSRKTQFEETIYRTEDERFELDLVIEVNSATIRVLENV 1162

Query: 591  LEKINNNTIKTDGPIRVEDHF----TALNLRCIERLYGDHGLDVMDVLRKNASLALPVIL 646
             +K++  + +      ++DH       ++ R I R+YGD   +++  ++K+ S+A+P++L
Sbjct: 1163 QKKMSRMSSEELAKFHLDDHLGGTSQTIHQRAIHRIYGDKSGEIIQGMKKSPSVAVPIVL 1222

Query: 647  TRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEI 706
             RLK K+EEW   + +FNK W E   K Y KSLDH++  FK  D K+L +K+L  EI+ +
Sbjct: 1223 KRLKVKEEEWRDAQKNFNKQWREQNEKYYLKSLDHQAINFKPNDMKALRSKSLFNEIETL 1282

Query: 707  -SEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLI 749
              E+  +EDD++         S  PHL   Y D  I +D   L+
Sbjct: 1283 YDERHDQEDDMM--------DSTGPHLILPYKDKTILDDAANLL 1318



 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 44/96 (45%), Positives = 60/96 (62%), Gaps = 9/96 (9%)

Query: 42  KLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLI 101
           +L   DAL+YL  VK  + D+ + Y++FL++MK+FK+  IDT GVI RV  LFKGH +LI
Sbjct: 273 RLKVEDALSYLDQVKYQYADQPQIYNNFLDIMKEFKSHCIDTPGVIERVSTLFKGHTELI 332

Query: 102 LGFNTFLPKGYEI---------TLPLEDEQPPPKKP 128
            GFN FLP GY+I         ++P+     PP  P
Sbjct: 333 YGFNMFLPPGYKIEIHSDALGCSVPVVSMPSPPGAP 368



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/96 (44%), Positives = 52/96 (54%), Gaps = 13/96 (13%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI-------------TEVY 173
           +PVEF  AI +VNKIK RFQ     YK FL+IL+ Y+KE K I              EVY
Sbjct: 581 QPVEFNHAITYVNKIKNRFQNQPAKYKKFLEILHAYQKEQKVIKEGTLNQGKMLTEQEVY 640

Query: 174 QEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSG 209
            +V  LF    DLL EF  FLPD++   S    P+G
Sbjct: 641 TQVAKLFGQDEDLLREFGQFLPDATNHQSSAAAPTG 676



 Score = 47.0 bits (110), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 18/67 (26%), Positives = 39/67 (58%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           ++ E+A+++++++K ++     +Y +FLDI+  ++        V + V  LF+ H +L+ 
Sbjct: 274 LKVEDALSYLDQVKYQYADQPQIYNNFLDIMKEFKSHCIDTPGVIERVSTLFKGHTELIY 333

Query: 189 EFTHFLP 195
            F  FLP
Sbjct: 334 GFNMFLP 340



 Score = 44.7 bits (104), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 13/95 (13%)

Query: 28  QTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDF-KAQRIDTAG- 85
           Q+ ++G   G   Q +  N A+ Y+  +K+ FQ++  KY  FLE++  + K Q++   G 
Sbjct: 568 QSILLGETTGQQNQPVEFNHAITYVNKIKNRFQNQPAKYKKFLEILHAYQKEQKVIKEGT 627

Query: 86  -----------VIARVKELFKGHRDLILGFNTFLP 109
                      V  +V +LF    DL+  F  FLP
Sbjct: 628 LNQGKMLTEQEVYTQVAKLFGQDEDLLREFGQFLP 662



 Score = 43.5 bits (101), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 42/92 (45%), Gaps = 15/92 (16%)

Query: 123  PPPKKP------VEFEEAIN--------FVNKIKTRFQGDDHVYKSFLDILNMYRKENKS 168
            PP K+P      V F EA +        F +K++   +  D VY +FL  L ++ +E  S
Sbjct: 940  PPAKRPKPYCRDVSFSEASSKCTISDAAFFDKVRKALRSPD-VYDNFLRCLTLFNQEIVS 998

Query: 169  ITEVYQEVEALFQDHPDLLEEFTHFLPDSSGA 200
             TE+   V       PDLL  FT FL  + G 
Sbjct: 999  KTELLGLVSPFLTKFPDLLRWFTDFLGPTVGG 1030


>gi|126272520|ref|XP_001379929.1| PREDICTED: paired amphipathic helix protein Sin3a [Monodelphis
           domestica]
          Length = 1274

 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 135/431 (31%), Positives = 213/431 (49%), Gaps = 80/431 (18%)

Query: 355 FCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLARC 412
           F EKV+  LR  + Y+ FLRCL ++ +E+I+R              P+L+   + FL + 
Sbjct: 467 FFEKVRKALRSTEAYENFLRCLVIFNQEVISR--------------PELVQLVSPFLGKF 512

Query: 413 EKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRLDKSV 472
            +      + +  K         +SV +E   ++R  E                      
Sbjct: 513 PELFTWFKNFLGYK---------ESVHLETFPKERATE---------------------- 541

Query: 473 AFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGA 532
                  G  M               E+D ++C+R   SYR LPK+Y  P  + RT L  
Sbjct: 542 -------GIAM---------------EIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCK 579

Query: 533 EVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLE 592
           EVLND WVS  S SED +F   +K QYEE ++RCED+RFELD++LE+   T + +E + +
Sbjct: 580 EVLNDTWVSFPSWSEDSTFVSSKKTQYEEHIYRCEDERFELDVVLETNLATIRVLETIQK 639

Query: 593 KINNNTIKTDGPIRVEDHF----TALNLRCIERLYGDHGLDVMDVLRKNASLALPVILTR 648
           K++  + +     R+++        ++ + ++R+Y D   D++D LRKN S+A+P++L R
Sbjct: 640 KLSRLSAEEQAKFRLDNTLGGSSEVIHRKALQRIYADKAADIIDGLRKNPSIAVPIVLKR 699

Query: 649 LKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISE 708
           LK K+EEW   +  FNKVW E   K Y KSLDH+   FKQ D+K L +K+L  EI+ I +
Sbjct: 700 LKMKEEEWREAQRGFNKVWREQNEKYYLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYD 759

Query: 709 KKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLIKYSCGEMCTTEQLD--KVM 766
           +++++     A    +   + PHL   Y D  I ED   LI +        ++ D  K+ 
Sbjct: 760 ERQEQ-----ATEDSSGVPVGPHLSLAYEDKQILEDAAALIIHHVKRQTGIQKEDKYKIK 814

Query: 767 KIWTTFLEPML 777
           +I   F+  +L
Sbjct: 815 QIMHHFIPDLL 825



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 47/85 (55%), Positives = 61/85 (71%)

Query: 36  GGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFK 95
           G    Q+L   DAL+YL  VK  F  + + Y+DFL++MK+FK+Q IDT GVI+RV +LFK
Sbjct: 114 GQQQFQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFK 173

Query: 96  GHRDLILGFNTFLPKGYEITLPLED 120
           GH DLI+GFNTFLP GY+I +   D
Sbjct: 174 GHPDLIMGFNTFLPPGYKIEVQTND 198



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/88 (45%), Positives = 55/88 (62%), Gaps = 13/88 (14%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI-------------TEVY 173
           +PVEF  AIN+VNKIK RFQG   +YK+FL+IL+ Y+KE ++               EVY
Sbjct: 300 QPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVY 359

Query: 174 QEVEALFQDHPDLLEEFTHFLPDSSGAA 201
            +V  LF++  DLL EF  FLPD++ + 
Sbjct: 360 AQVARLFKNQEDLLSEFGQFLPDANSSV 387



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 40/67 (59%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           ++ E+A+++++++K +F     VY  FLDI+  ++ ++     V   V  LF+ HPDL+ 
Sbjct: 121 LKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIM 180

Query: 189 EFTHFLP 195
            F  FLP
Sbjct: 181 GFNTFLP 187


>gi|21755985|dbj|BAC04801.1| unnamed protein product [Homo sapiens]
          Length = 810

 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 135/416 (32%), Positives = 205/416 (49%), Gaps = 78/416 (18%)

Query: 355 FCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLARC 412
           F +KV+  LR  + Y+ FLRCL ++ +E+I+R+EL  LV   LG++P+L + F  FL   
Sbjct: 466 FFDKVRKALRSAEAYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPELFNWFKNFLGYK 525

Query: 413 EKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRLDKSV 472
           E                       SV +E   ++R  E   G+      A E D      
Sbjct: 526 E-----------------------SVHLETYPKERATE---GI------AMEID------ 547

Query: 473 AFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGA 532
                        Y+S  +          L +  R  P     PK       + RT L  
Sbjct: 548 -------------YASCKR----------LGSSYRALPKSYQQPK------CTGRTPLCK 578

Query: 533 EVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLE 592
           EVLND WVS  S SED +F   +K QYEE ++RCED+RFELD++LE+   T + +E + +
Sbjct: 579 EVLNDTWVSFPSWSEDSTFVSSKKTQYEEHIYRCEDERFELDVVLETNLATIRVLEAIQK 638

Query: 593 KINNNTIKTDGPIRVEDHF----TALNLRCIERLYGDHGLDVMDVLRKNASLALPVILTR 648
           K++  + +     R+++        ++ + ++R+Y D   D++D LRKN S+A+P++L R
Sbjct: 639 KLSRLSAEEQAKFRLDNTLGGTSEVIHRKALQRIYADKAADIIDGLRKNPSIAVPIVLKR 698

Query: 649 LKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISE 708
           LK K+EEW   +  FNKVW E   K Y KSLDH+   FKQ D+K L +K+L  EI+ I +
Sbjct: 699 LKMKEEEWREAQRGFNKVWREQNEKYYLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYD 758

Query: 709 KKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLIKYSCGEMCTTEQLDK 764
           +++++     A        + PHL   Y D  I ED   LI +        ++ DK
Sbjct: 759 ERQEQ-----ATEENAGVPVGPHLSLAYEDKQILEDAAALIIHHVKRQTGIQKEDK 809



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 46/80 (57%), Positives = 60/80 (75%)

Query: 41  QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDL 100
           Q+L   DAL+YL  VK  F  + + Y+DFL++MK+FK+Q IDT GVI+RV +LFKGH DL
Sbjct: 119 QRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDL 178

Query: 101 ILGFNTFLPKGYEITLPLED 120
           I+GFNTFLP GY+I +   D
Sbjct: 179 IMGFNTFLPPGYKIEVQTND 198



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/88 (45%), Positives = 55/88 (62%), Gaps = 13/88 (14%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI-------------TEVY 173
           +PVEF  AIN+VNKIK RFQG   +YK+FL+IL+ Y+KE ++               EVY
Sbjct: 300 QPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVY 359

Query: 174 QEVEALFQDHPDLLEEFTHFLPDSSGAA 201
            +V  LF++  DLL EF  FLPD++ + 
Sbjct: 360 AQVARLFKNQEDLLSEFGQFLPDANSSV 387



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 9/81 (11%)

Query: 124 PPKKPVE---------FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQ 174
           PP  PV+          E+A+++++++K +F     VY  FLDI+  ++ ++     V  
Sbjct: 107 PPVAPVQGQQQFQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVIS 166

Query: 175 EVEALFQDHPDLLEEFTHFLP 195
            V  LF+ HPDL+  F  FLP
Sbjct: 167 RVSQLFKGHPDLIMGFNTFLP 187


>gi|395746998|ref|XP_002825742.2| PREDICTED: paired amphipathic helix protein Sin3a, partial [Pongo
           abelii]
          Length = 950

 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 138/431 (32%), Positives = 212/431 (49%), Gaps = 80/431 (18%)

Query: 355 FCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLARC 412
           F +KV+  LR  + Y+ FLRCL ++ +E+I+R+EL  LV   LG++P+L + F  FL   
Sbjct: 466 FFDKVRKALRSAEAYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPELFNWFKNFLGYK 525

Query: 413 EKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRLDKSV 472
           E                       SV +E   ++R  E   G+      A E D      
Sbjct: 526 E-----------------------SVHLETYPKERATE---GI------AMEID------ 547

Query: 473 AFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGA 532
                        Y+S  +          L +  R  P     PK       + RT L  
Sbjct: 548 -------------YASCKR----------LGSSYRALPKSYQQPK------CTGRTPLCK 578

Query: 533 EVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLE 592
           EVLND WVS  S SED +F   +K QYEE ++RCED+RFELD++LE+   T + +E + +
Sbjct: 579 EVLNDTWVSFPSWSEDSTFVSSKKTQYEEHIYRCEDERFELDVVLETNLATIRVLEAIQK 638

Query: 593 KINNNTIKTDGPIRVEDHFT----ALNLRCIERLYGDHGLDVMDVLRKNASLALPVILTR 648
           K++  + +     R+++        ++ + ++R+Y D   D++D LRKN S+A+P++L R
Sbjct: 639 KLSRLSAEEQAKFRLDNTLGGTSEVIHRKALQRIYADKAADIIDGLRKNPSIAVPIVLKR 698

Query: 649 LKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISE 708
           LK K+EEW   +  FNKVW E   K Y KSLDH+   FKQ D+K L +K+L  EI+ I +
Sbjct: 699 LKMKEEEWREAQRGFNKVWREQNEKYYLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYD 758

Query: 709 KKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLIKYSCGEMCTTEQLD--KVM 766
           +++++     A        + PHL   Y D  I ED   LI +        ++ D  K+ 
Sbjct: 759 ERQEQ-----ATEENAGVPVGPHLSLAYEDKQILEDAAALIIHHVKRQTGIQKEDKYKIK 813

Query: 767 KIWTTFLEPML 777
           +I   F+  +L
Sbjct: 814 QIMHHFIPDLL 824



 Score =  102 bits (253), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 46/80 (57%), Positives = 60/80 (75%)

Query: 41  QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDL 100
           Q+L   DAL+YL  VK  F  + + Y+DFL++MK+FK+Q IDT GVI+RV +LFKGH DL
Sbjct: 119 QRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDL 178

Query: 101 ILGFNTFLPKGYEITLPLED 120
           I+GFNTFLP GY+I +   D
Sbjct: 179 IMGFNTFLPPGYKIEVQTND 198



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/88 (45%), Positives = 55/88 (62%), Gaps = 13/88 (14%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI-------------TEVY 173
           +PVEF  AIN+VNKIK RFQG   +YK+FL+IL+ Y+KE ++               EVY
Sbjct: 300 QPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVY 359

Query: 174 QEVEALFQDHPDLLEEFTHFLPDSSGAA 201
            +V  LF++  DLL EF  FLPD++ + 
Sbjct: 360 AQVARLFKNQEDLLSEFGQFLPDANSSV 387



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 9/81 (11%)

Query: 124 PPKKPVE---------FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQ 174
           PP  PV+          E+A+++++++K +F     VY  FLDI+  ++ ++     V  
Sbjct: 107 PPVAPVQGQQQFQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVIS 166

Query: 175 EVEALFQDHPDLLEEFTHFLP 195
            V  LF+ HPDL+  F  FLP
Sbjct: 167 RVSQLFKGHPDLIMGFNTFLP 187


>gi|14042320|dbj|BAB55197.1| unnamed protein product [Homo sapiens]
          Length = 1026

 Score =  200 bits (509), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 138/431 (32%), Positives = 212/431 (49%), Gaps = 80/431 (18%)

Query: 355 FCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLARC 412
           F +KV+  LR  + Y+ FLRCL ++ +E+I+R+EL  LV   LG++P+L + F  FL   
Sbjct: 466 FFDKVRKALRSAEAYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPELFNWFKNFLGYK 525

Query: 413 EKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRLDKSV 472
           E                       SV +E   ++R  E   G+      A E D      
Sbjct: 526 E-----------------------SVHLETYPKERATE---GI------AMEID------ 547

Query: 473 AFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGA 532
                        Y+S  +          L +  R  P     PK       + RT L  
Sbjct: 548 -------------YASCKR----------LGSSYRALPKSYQQPK------CTGRTPLCK 578

Query: 533 EVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLE 592
           EVLND WVS  S SED +F   +K QYEE ++RCED+RFELD++LE+   T + +E + +
Sbjct: 579 EVLNDTWVSFPSWSEDSTFVSSKKTQYEEHIYRCEDERFELDVVLETNLATIRVLEAIQK 638

Query: 593 KINNNTIKTDGPIRVEDHF----TALNLRCIERLYGDHGLDVMDVLRKNASLALPVILTR 648
           K++  + +     R+++        ++ + ++R+Y D   D++D LRKN S+A+P++L R
Sbjct: 639 KLSRLSAEEQAKFRLDNTLGGTSEVIHRKALQRIYADKAADIIDGLRKNPSIAVPIVLKR 698

Query: 649 LKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISE 708
           LK K+EEW   +  FNKVW E   K Y KSLDH+   FKQ D+K L +K+L  EI+ I +
Sbjct: 699 LKMKEEEWREAQRGFNKVWREQNEKYYLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYD 758

Query: 709 KKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLIKYSCGEMCTTEQLD--KVM 766
           +++++     A        + PHL   Y D  I ED   LI +        ++ D  K+ 
Sbjct: 759 ERQEQ-----ATEENAGVPVGPHLSLAYEDKQILEDAAALIIHHVKRQTGIQKEDKYKIK 813

Query: 767 KIWTTFLEPML 777
           +I   F+  +L
Sbjct: 814 QIMHHFIPDLL 824



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 50/103 (48%), Positives = 67/103 (65%), Gaps = 2/103 (1%)

Query: 18  MISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFK 77
           ++ S   P+     V G      Q+L   DAL+YL  VK  F  + + Y+DFL++MK+FK
Sbjct: 98  VVQSHAHPAPPVAPVQGQQQ--FQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFK 155

Query: 78  AQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLED 120
           +Q IDT GVI+RV +LFKGH DLI+GFNTFLP GY+I +   D
Sbjct: 156 SQSIDTPGVISRVSQLFKGHPDLIMGFNTFLPPGYKIEVQTND 198



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/88 (45%), Positives = 55/88 (62%), Gaps = 13/88 (14%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI-------------TEVY 173
           +PVEF  AIN+VNKIK RFQG   +YK+FL+IL+ Y+KE ++               EVY
Sbjct: 300 QPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVY 359

Query: 174 QEVEALFQDHPDLLEEFTHFLPDSSGAA 201
            +V  LF++  DLL EF  FLPD++ + 
Sbjct: 360 AQVARLFKNQEDLLSEFGQFLPDANSSV 387



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 9/81 (11%)

Query: 124 PPKKPVE---------FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQ 174
           PP  PV+          E+A+++++++K +F     VY  FLDI+  ++ ++     V  
Sbjct: 107 PPVAPVQGQQQFQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVIS 166

Query: 175 EVEALFQDHPDLLEEFTHFLP 195
            V  LF+ HPDL+  F  FLP
Sbjct: 167 RVSQLFKGHPDLIMGFNTFLP 187


>gi|356524091|ref|XP_003530666.1| PREDICTED: paired amphipathic helix protein Sin3-like 3-like
           [Glycine max]
          Length = 267

 Score =  200 bits (509), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 106/202 (52%), Positives = 134/202 (66%), Gaps = 1/202 (0%)

Query: 30  QVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIAR 89
           Q +  G G   Q+  T+ ALAYL  VKD F+D REKYD FLE++K+F A+R +    I  
Sbjct: 21  QPLVNGRGAKKQRPMTDSALAYLTTVKDAFKDDREKYDKFLELVKNFTAERFNLVRGIEE 80

Query: 90  VKELFKGHRDLILGFNTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDD 149
           VKEL KG+RDLILGFN FLPKGYEI LPLEDEQPP KK   F +A   ++KIK RF G D
Sbjct: 81  VKELLKGYRDLILGFNVFLPKGYEIKLPLEDEQPPEKKLDVFVKAKKLLHKIKARFHGQD 140

Query: 150 HVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSG 209
           +VYK+FL IL M++   KS T  Y E+ AL Q H DLL E      ++S   SIH+  S 
Sbjct: 141 NVYKTFLAILKMHKDGTKSPTAAYGEITALLQHHADLLNELPFLSLNTSRTISIHFT-SA 199

Query: 210 RNSILRDRSSAMPTARQVHVDK 231
           +NS+ R++SSA+P  +Q+ V K
Sbjct: 200 QNSLFREKSSAVPIVQQMCVLK 221


>gi|195333820|ref|XP_002033584.1| GM20350 [Drosophila sechellia]
 gi|194125554|gb|EDW47597.1| GM20350 [Drosophila sechellia]
          Length = 2055

 Score =  199 bits (507), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 132/405 (32%), Positives = 202/405 (49%), Gaps = 61/405 (15%)

Query: 354  SFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLA- 410
            +F +KV+  LR    Y  FLRCL L+ +EI++++EL  LV   L ++PDL+  F  FL  
Sbjct: 922  AFFDKVRKALRSPEVYDNFLRCLTLFNQEIVSKTELLGLVSPFLMKFPDLLRWFTDFLGP 981

Query: 411  RCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRLDK 470
               +    L D M   +   +G               +   D G                
Sbjct: 982  PSGQPAGGLIDGMPLAATQRQG-----------GGSSNSSHDRG---------------- 1014

Query: 471  SVAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTEL 530
                         S + S  +Y+    Q++DLS+C+R   SY  LP+  +    S RT L
Sbjct: 1015 -------------SSHQSAAEYV----QDVDLSSCKRLGASYCALPQTTVPKKCSGRTAL 1057

Query: 531  GAEVLNDHWVSV-TSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEE 589
              EVLND WVS  T  SED +F   RK Q+EE+++R ED+RFELD+++E  + T + +E 
Sbjct: 1058 CREVLNDKWVSFPTWASEDSTFVTSRKTQFEETIYRTEDERFELDLVIEVNSATIRVLEN 1117

Query: 590  LLEKINNNTIKTDGPIRVEDHFTA----LNLRCIERLYGDHGLDVMDVLRKNASLALPVI 645
            L +K++  + +      ++DH       ++ R I R+YGD   +++  ++KN  +A+P++
Sbjct: 1118 LQKKMSRMSTEELSKFHLDDHLGGTSQTIHQRAIHRIYGDKSGEIITGMKKNPFVAVPIV 1177

Query: 646  LTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKE 705
            L RLK K+EEW   +  FNK W E   K Y KSLDH++  FK  D K+L +K+L  EI+ 
Sbjct: 1178 LKRLKVKEEEWREAQKTFNKQWREQNEKYYLKSLDHQAINFKPNDMKALRSKSLFNEIET 1237

Query: 706  I-SEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLI 749
            +  E+  +EDD +            PHL   Y D  I +D   L+
Sbjct: 1238 LYDERHDQEDDAMEPFG--------PHLVLPYKDKTILDDAANLL 1274



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 49/114 (42%), Positives = 65/114 (57%), Gaps = 9/114 (7%)

Query: 25  PSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTA 84
           P G T    G  G    +L   DAL+YL  VK  + D+ + Y++FL++MK+FK+  IDT 
Sbjct: 252 PVGGTTPPQGQSGNATPRLKVEDALSYLDQVKYQYADQPQIYNNFLDIMKEFKSHCIDTP 311

Query: 85  GVIARVKELFKGHRDLILGFNTFLPKGYEI---------TLPLEDEQPPPKKPV 129
           GVI RV  LFKGH +LI GFN FLP GY+I         ++P+     PP  P 
Sbjct: 312 GVIERVSTLFKGHTELIYGFNMFLPPGYKIEIHSDALGCSVPVVSMPSPPGAPT 365



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 43/99 (43%), Positives = 53/99 (53%), Gaps = 21/99 (21%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI-------------TEVY 173
           +PVEF  AI +VNKIK RFQ     YK FL+IL+ Y+KE K +              EVY
Sbjct: 565 QPVEFNHAITYVNKIKNRFQNQPAKYKKFLEILHAYQKEQKVMKEGSLNQGKMLTEQEVY 624

Query: 174 QEVEALFQDHPDLLEEFTHFLPDS--------SGAASIH 204
            +V  LF    DLL EF  FLPD+        S +AS+H
Sbjct: 625 TQVAKLFGQDEDLLREFGQFLPDATNQSGQYMSKSASVH 663



 Score = 48.1 bits (113), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 21/87 (24%), Positives = 46/87 (52%), Gaps = 6/87 (6%)

Query: 115 TLPLEDEQPPPKKP------VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKS 168
           ++P+    PP  +       ++ E+A+++++++K ++     +Y +FLDI+  ++     
Sbjct: 250 SIPVGGTTPPQGQSGNATPRLKVEDALSYLDQVKYQYADQPQIYNNFLDIMKEFKSHCID 309

Query: 169 ITEVYQEVEALFQDHPDLLEEFTHFLP 195
              V + V  LF+ H +L+  F  FLP
Sbjct: 310 TPGVIERVSTLFKGHTELIYGFNMFLP 336



 Score = 43.1 bits (100), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 41/91 (45%), Gaps = 15/91 (16%)

Query: 123 PPPKKP------VEFEEAIN--------FVNKIKTRFQGDDHVYKSFLDILNMYRKENKS 168
           PP K+P      V F EA          F +K++   +  + VY +FL  L ++ +E  S
Sbjct: 895 PPAKRPKPYCRDVSFSEASTKCTISDAAFFDKVRKALRSPE-VYDNFLRCLTLFNQEIVS 953

Query: 169 ITEVYQEVEALFQDHPDLLEEFTHFLPDSSG 199
            TE+   V       PDLL  FT FL   SG
Sbjct: 954 KTELLGLVSPFLMKFPDLLRWFTDFLGPPSG 984



 Score = 42.4 bits (98), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 13/92 (14%)

Query: 31  VVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDF-KAQRIDTAG---- 85
           ++ G  G   Q +  N A+ Y+  +K+ FQ++  KY  FLE++  + K Q++   G    
Sbjct: 555 ILLGETGQQNQPVEFNHAITYVNKIKNRFQNQPAKYKKFLEILHAYQKEQKVMKEGSLNQ 614

Query: 86  --------VIARVKELFKGHRDLILGFNTFLP 109
                   V  +V +LF    DL+  F  FLP
Sbjct: 615 GKMLTEQEVYTQVAKLFGQDEDLLREFGQFLP 646


>gi|195582807|ref|XP_002081217.1| GD25829 [Drosophila simulans]
 gi|194193226|gb|EDX06802.1| GD25829 [Drosophila simulans]
          Length = 2057

 Score =  199 bits (506), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 132/405 (32%), Positives = 202/405 (49%), Gaps = 61/405 (15%)

Query: 354  SFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLA- 410
            +F +KV+  LR    Y  FLRCL L+ +EI++++EL  LV   L ++PDL+  F  FL  
Sbjct: 923  AFFDKVRKALRSPEVYDNFLRCLTLFNQEIVSKTELLGLVSPFLMKFPDLLRWFTDFLGP 982

Query: 411  RCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRLDK 470
               +    L D M   +   +G               +   D G                
Sbjct: 983  PSGQPAGGLIDGMPLAATQRQG-----------GGSSNSSHDRG---------------- 1015

Query: 471  SVAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTEL 530
                         S + S  +Y+    Q++DLS+C+R   SY  LP+  +    S RT L
Sbjct: 1016 -------------SSHQSAAEYV----QDVDLSSCKRLGASYCALPQTTVPKKCSGRTAL 1058

Query: 531  GAEVLNDHWVSV-TSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEE 589
              EVLND WVS  T  SED +F   RK Q+EE+++R ED+RFELD+++E  + T + +E 
Sbjct: 1059 CREVLNDKWVSFPTWASEDSTFVTSRKTQFEETIYRTEDERFELDLVIEVNSATIRVLEN 1118

Query: 590  LLEKINNNTIKTDGPIRVEDHFTA----LNLRCIERLYGDHGLDVMDVLRKNASLALPVI 645
            L +K++  + +      ++DH       ++ R I R+YGD   +++  ++KN  +A+P++
Sbjct: 1119 LQKKMSRMSTEELSKFHLDDHLGGTSQTIHQRAIHRIYGDKSGEIITGMKKNPFVAVPIV 1178

Query: 646  LTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKE 705
            L RLK K+EEW   +  FNK W E   K Y KSLDH++  FK  D K+L +K+L  EI+ 
Sbjct: 1179 LKRLKVKEEEWREAQKTFNKQWREQNEKYYLKSLDHQAINFKPNDMKALRSKSLFNEIET 1238

Query: 706  I-SEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLI 749
            +  E+  +EDD +            PHL   Y D  I +D   L+
Sbjct: 1239 LYDERHDQEDDAMEPFG--------PHLVLPYKDKTILDDAANLL 1275



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 49/114 (42%), Positives = 65/114 (57%), Gaps = 9/114 (7%)

Query: 25  PSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTA 84
           P G T    G  G    +L   DAL+YL  VK  + D+ + Y++FL++MK+FK+  IDT 
Sbjct: 252 PVGGTTPPQGQSGNATPRLKVEDALSYLDQVKYQYADQPQIYNNFLDIMKEFKSHCIDTP 311

Query: 85  GVIARVKELFKGHRDLILGFNTFLPKGYEI---------TLPLEDEQPPPKKPV 129
           GVI RV  LFKGH +LI GFN FLP GY+I         ++P+     PP  P 
Sbjct: 312 GVIERVSTLFKGHTELIYGFNMFLPPGYKIEIHSDALGCSVPVVSMPSPPGAPT 365



 Score = 76.3 bits (186), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 41/93 (44%), Positives = 51/93 (54%), Gaps = 13/93 (13%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI-------------TEVY 173
           +PVEF  AI +VNKIK RFQ     YK FL+IL+ Y+KE K +              EVY
Sbjct: 565 QPVEFNHAITYVNKIKNRFQNQPAKYKKFLEILHAYQKEQKVMKEGSLNQGKMLTEQEVY 624

Query: 174 QEVEALFQDHPDLLEEFTHFLPDSSGAASIHYV 206
            +V  LF    DLL EF  FLPD++   S  Y+
Sbjct: 625 TQVAKLFGQDEDLLREFGQFLPDATNHQSGQYM 657



 Score = 48.1 bits (113), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 21/87 (24%), Positives = 46/87 (52%), Gaps = 6/87 (6%)

Query: 115 TLPLEDEQPPPKKP------VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKS 168
           ++P+    PP  +       ++ E+A+++++++K ++     +Y +FLDI+  ++     
Sbjct: 250 SIPVGGTTPPQGQSGNATPRLKVEDALSYLDQVKYQYADQPQIYNNFLDIMKEFKSHCID 309

Query: 169 ITEVYQEVEALFQDHPDLLEEFTHFLP 195
              V + V  LF+ H +L+  F  FLP
Sbjct: 310 TPGVIERVSTLFKGHTELIYGFNMFLP 336



 Score = 43.1 bits (100), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 42/91 (46%), Gaps = 15/91 (16%)

Query: 123 PPPKKP------VEFEEAIN--------FVNKIKTRFQGDDHVYKSFLDILNMYRKENKS 168
           PP K+P      V F EA +        F +K++   +  + VY +FL  L ++ +E  S
Sbjct: 896 PPAKRPKPYCRDVSFSEASSKCTISDAAFFDKVRKALRSPE-VYDNFLRCLTLFNQEIVS 954

Query: 169 ITEVYQEVEALFQDHPDLLEEFTHFLPDSSG 199
            TE+   V       PDLL  FT FL   SG
Sbjct: 955 KTELLGLVSPFLMKFPDLLRWFTDFLGPPSG 985



 Score = 42.4 bits (98), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 13/92 (14%)

Query: 31  VVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDF-KAQRIDTAG---- 85
           ++ G  G   Q +  N A+ Y+  +K+ FQ++  KY  FLE++  + K Q++   G    
Sbjct: 555 ILLGETGQQNQPVEFNHAITYVNKIKNRFQNQPAKYKKFLEILHAYQKEQKVMKEGSLNQ 614

Query: 86  --------VIARVKELFKGHRDLILGFNTFLP 109
                   V  +V +LF    DL+  F  FLP
Sbjct: 615 GKMLTEQEVYTQVAKLFGQDEDLLREFGQFLP 646


>gi|119619655|gb|EAW99249.1| SIN3 homolog A, transcription regulator (yeast), isoform CRA_a
           [Homo sapiens]
          Length = 1208

 Score =  199 bits (506), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 138/431 (32%), Positives = 212/431 (49%), Gaps = 80/431 (18%)

Query: 355 FCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLARC 412
           F +KV+  LR  + Y+ FLRCL ++ +E+I+R+EL  LV   LG++P+L + F  FL   
Sbjct: 459 FFDKVRKALRSAEAYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPELFNWFKNFLGYK 518

Query: 413 EKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRLDKSV 472
           E                       SV +E   ++R  E   G+      A E D      
Sbjct: 519 E-----------------------SVHLETYPKERATE---GI------AMEID------ 540

Query: 473 AFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGA 532
                        Y+S  +          L +  R  P     PK       + RT L  
Sbjct: 541 -------------YASCKR----------LGSSYRALPKSYQQPK------CTGRTPLCK 571

Query: 533 EVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLE 592
           EVLND WVS  S SED +F   +K QYEE ++RCED+RFELD++LE+   T + +E + +
Sbjct: 572 EVLNDTWVSFPSWSEDSTFVSSKKTQYEEHIYRCEDERFELDVVLETNLATIRVLEAIQK 631

Query: 593 KINNNTIKTDGPIRVEDHF----TALNLRCIERLYGDHGLDVMDVLRKNASLALPVILTR 648
           K++  + +     R+++        ++ + ++R+Y D   D++D LRKN S+A+P++L R
Sbjct: 632 KLSRLSAEEQAKFRLDNTLGGTSEVIHRKALQRIYADKAADIIDGLRKNPSIAVPIVLKR 691

Query: 649 LKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISE 708
           LK K+EEW   +  FNKVW E   K Y KSLDH+   FKQ D+K L +K+L  EI+ I +
Sbjct: 692 LKMKEEEWREAQRGFNKVWREQNEKYYLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYD 751

Query: 709 KKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLIKYSCGEMCTTEQLD--KVM 766
           +++++     A        + PHL   Y D  I ED   LI +        ++ D  K+ 
Sbjct: 752 ERQEQ-----ATEENAGVPVGPHLSLAYEDKQILEDAAALIIHHVKRQTGIQKEDKYKIK 806

Query: 767 KIWTTFLEPML 777
           +I   F+  +L
Sbjct: 807 QIMHHFIPDLL 817



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 49/103 (47%), Positives = 66/103 (64%), Gaps = 1/103 (0%)

Query: 18  MISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFK 77
           ++ S   P+     V G       K+   DAL+YL  VK  F  + + Y+DFL++MK+FK
Sbjct: 98  VVQSHAHPAPPVAPVQGQQQFQRLKVV-EDALSYLDQVKLQFGSQPQVYNDFLDIMKEFK 156

Query: 78  AQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLED 120
           +Q IDT GVI+RV +LFKGH DLI+GFNTFLP GY+I +   D
Sbjct: 157 SQSIDTPGVISRVSQLFKGHPDLIMGFNTFLPPGYKIEVQTND 199



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 40/80 (50%), Positives = 55/80 (68%), Gaps = 5/80 (6%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYR---KENKSIT--EVYQEVEALFQ 181
           +PVEF  AIN+VNKIK RFQG   +YK+FL+IL+ Y+     + S+T  EVY +V  LF+
Sbjct: 301 QPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQVRSAHSASLTEQEVYAQVARLFK 360

Query: 182 DHPDLLEEFTHFLPDSSGAA 201
           +  DLL EF  FLPD++ + 
Sbjct: 361 NQEDLLSEFGQFLPDANSSV 380



 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 10/82 (12%)

Query: 124 PPKKPVE----------FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVY 173
           PP  PV+           E+A+++++++K +F     VY  FLDI+  ++ ++     V 
Sbjct: 107 PPVAPVQGQQQFQRLKVVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVI 166

Query: 174 QEVEALFQDHPDLLEEFTHFLP 195
             V  LF+ HPDL+  F  FLP
Sbjct: 167 SRVSQLFKGHPDLIMGFNTFLP 188



 Score = 46.6 bits (109), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 5/74 (6%)

Query: 41  QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAG-----VIARVKELFK 95
           Q +  N A+ Y+  +K+ FQ + + Y  FLE++  ++ +   +A      V A+V  LFK
Sbjct: 301 QPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQVRSAHSASLTEQEVYAQVARLFK 360

Query: 96  GHRDLILGFNTFLP 109
              DL+  F  FLP
Sbjct: 361 NQEDLLSEFGQFLP 374


>gi|119619656|gb|EAW99250.1| SIN3 homolog A, transcription regulator (yeast), isoform CRA_b
           [Homo sapiens]
          Length = 1210

 Score =  199 bits (506), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 138/431 (32%), Positives = 212/431 (49%), Gaps = 80/431 (18%)

Query: 355 FCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLARC 412
           F +KV+  LR  + Y+ FLRCL ++ +E+I+R+EL  LV   LG++P+L + F  FL   
Sbjct: 459 FFDKVRKALRSAEAYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPELFNWFKNFLGYK 518

Query: 413 EKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRLDKSV 472
           E                       SV +E   ++R  E   G+      A E D      
Sbjct: 519 E-----------------------SVHLETYPKERATE---GI------AMEID------ 540

Query: 473 AFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGA 532
                        Y+S  +          L +  R  P     PK       + RT L  
Sbjct: 541 -------------YASCKR----------LGSSYRALPKSYQQPK------CTGRTPLCK 571

Query: 533 EVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLE 592
           EVLND WVS  S SED +F   +K QYEE ++RCED+RFELD++LE+   T + +E + +
Sbjct: 572 EVLNDTWVSFPSWSEDSTFVSSKKTQYEEHIYRCEDERFELDVVLETNLATIRVLEAIQK 631

Query: 593 KINNNTIKTDGPIRVEDHF----TALNLRCIERLYGDHGLDVMDVLRKNASLALPVILTR 648
           K++  + +     R+++        ++ + ++R+Y D   D++D LRKN S+A+P++L R
Sbjct: 632 KLSRLSAEEQAKFRLDNTLGGTSEVIHRKALQRIYADKAADIIDGLRKNPSIAVPIVLKR 691

Query: 649 LKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISE 708
           LK K+EEW   +  FNKVW E   K Y KSLDH+   FKQ D+K L +K+L  EI+ I +
Sbjct: 692 LKMKEEEWREAQRGFNKVWREQNEKYYLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYD 751

Query: 709 KKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLIKYSCGEMCTTEQLD--KVM 766
           +++++     A        + PHL   Y D  I ED   LI +        ++ D  K+ 
Sbjct: 752 ERQEQ-----ATEENAGVPVGPHLSLAYEDKQILEDAAALIIHHVKRQTGIQKEDKYKIK 806

Query: 767 KIWTTFLEPML 777
           +I   F+  +L
Sbjct: 807 QIMHHFIPDLL 817



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 49/103 (47%), Positives = 66/103 (64%), Gaps = 1/103 (0%)

Query: 18  MISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFK 77
           ++ S   P+     V G       K+   DAL+YL  VK  F  + + Y+DFL++MK+FK
Sbjct: 98  VVQSHAHPAPPVAPVQGQQQFQRLKVV-EDALSYLDQVKLQFGSQPQVYNDFLDIMKEFK 156

Query: 78  AQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLED 120
           +Q IDT GVI+RV +LFKGH DLI+GFNTFLP GY+I +   D
Sbjct: 157 SQSIDTPGVISRVSQLFKGHPDLIMGFNTFLPPGYKIEVQTND 199



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 40/80 (50%), Positives = 55/80 (68%), Gaps = 5/80 (6%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYR---KENKSIT--EVYQEVEALFQ 181
           +PVEF  AIN+VNKIK RFQG   +YK+FL+IL+ Y+     + S+T  EVY +V  LF+
Sbjct: 301 QPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQVRSAHSASLTEQEVYAQVARLFK 360

Query: 182 DHPDLLEEFTHFLPDSSGAA 201
           +  DLL EF  FLPD++ + 
Sbjct: 361 NQEDLLSEFGQFLPDANSSV 380



 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 10/82 (12%)

Query: 124 PPKKPVE----------FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVY 173
           PP  PV+           E+A+++++++K +F     VY  FLDI+  ++ ++     V 
Sbjct: 107 PPVAPVQGQQQFQRLKVVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVI 166

Query: 174 QEVEALFQDHPDLLEEFTHFLP 195
             V  LF+ HPDL+  F  FLP
Sbjct: 167 SRVSQLFKGHPDLIMGFNTFLP 188



 Score = 46.2 bits (108), Expect = 0.086,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 5/74 (6%)

Query: 41  QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAG-----VIARVKELFK 95
           Q +  N A+ Y+  +K+ FQ + + Y  FLE++  ++ +   +A      V A+V  LFK
Sbjct: 301 QPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQVRSAHSASLTEQEVYAQVARLFK 360

Query: 96  GHRDLILGFNTFLP 109
              DL+  F  FLP
Sbjct: 361 NQEDLLSEFGQFLP 374


>gi|194883594|ref|XP_001975886.1| GG22567 [Drosophila erecta]
 gi|190659073|gb|EDV56286.1| GG22567 [Drosophila erecta]
          Length = 2060

 Score =  199 bits (506), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 129/404 (31%), Positives = 203/404 (50%), Gaps = 59/404 (14%)

Query: 354  SFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLA- 410
            +F +KV+  LR    Y  FLRCL L+ +EI++++EL  LV   L ++PDL+  F  FL  
Sbjct: 927  AFFDKVRKALRSPEVYDNFLRCLALFNQEIVSKTELLGLVSPFLMKFPDLLRWFTDFLGP 986

Query: 411  RCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRLDK 470
               +    L D M   +   +G               +   D G                
Sbjct: 987  PSGQPAGGLIDGMPLAATQRQG-----------GGSSNSSHDRG---------------- 1019

Query: 471  SVAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTEL 530
                         S + S  +Y+    Q++DLS+C+R   SY  LP++ +    S RT L
Sbjct: 1020 -------------SSHQSAAEYV----QDVDLSSCKRLGASYCALPQSTVPKKCSGRTAL 1062

Query: 531  GAEVLNDHWVSV-TSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEE 589
              EVLND WVS  T  SED +F   RK Q+EE+++R ED+RFELD+++E  + T + +E 
Sbjct: 1063 CREVLNDKWVSFPTWASEDSTFVTSRKTQFEETIYRTEDERFELDLVIEVNSATIRVLEN 1122

Query: 590  LLEKINNNTIKTDGPIRVEDHFTA----LNLRCIERLYGDHGLDVMDVLRKNASLALPVI 645
            + +K++  + +      ++DH       ++ R I R+YGD   +++  ++KN  +A+P++
Sbjct: 1123 VQKKMSRMSTEELSKFHLDDHLGGTSQTIHQRAIHRIYGDKSGEIIQGMKKNPFVAVPIV 1182

Query: 646  LTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKE 705
            L RLK K+EEW   +  FNK W E   K Y KSLDH++  FK  D K+L +K+L  EI+ 
Sbjct: 1183 LKRLKVKEEEWREAQKTFNKQWREQNEKYYLKSLDHQAINFKPNDMKALRSKSLFNEIET 1242

Query: 706  ISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLI 749
            + +++  +DD  +           PHL   Y D  I +D   L+
Sbjct: 1243 LYDERHDQDDDAM-------EPFGPHLVLPYKDKTILDDAANLL 1279



 Score = 98.6 bits (244), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 49/114 (42%), Positives = 65/114 (57%), Gaps = 9/114 (7%)

Query: 25  PSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTA 84
           P G T    G  G    +L   DAL+YL  VK  + D+ + Y++FL++MK+FK+  IDT 
Sbjct: 255 PVGGTTPPQGQSGNATPRLKVEDALSYLDQVKYQYADQPQIYNNFLDIMKEFKSHCIDTP 314

Query: 85  GVIARVKELFKGHRDLILGFNTFLPKGYEI---------TLPLEDEQPPPKKPV 129
           GVI RV  LFKGH +LI GFN FLP GY+I         ++P+     PP  P 
Sbjct: 315 GVIERVSTLFKGHTELIYGFNMFLPPGYKIEIHSDALGCSVPVVSMPSPPGAPT 368



 Score = 76.3 bits (186), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 41/93 (44%), Positives = 51/93 (54%), Gaps = 13/93 (13%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI-------------TEVY 173
           +PVEF  AI +VNKIK RFQ     YK FL+IL+ Y+KE K +              EVY
Sbjct: 569 QPVEFNHAITYVNKIKNRFQNQPAKYKKFLEILHAYQKEQKVMKEGSLNQGKMLTEQEVY 628

Query: 174 QEVEALFQDHPDLLEEFTHFLPDSSGAASIHYV 206
            +V  LF    DLL EF  FLPD++   S  Y+
Sbjct: 629 TQVAKLFGQDEDLLREFGQFLPDATNHQSGQYM 661



 Score = 48.1 bits (113), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 21/87 (24%), Positives = 46/87 (52%), Gaps = 6/87 (6%)

Query: 115 TLPLEDEQPPPKKP------VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKS 168
           ++P+    PP  +       ++ E+A+++++++K ++     +Y +FLDI+  ++     
Sbjct: 253 SIPVGGTTPPQGQSGNATPRLKVEDALSYLDQVKYQYADQPQIYNNFLDIMKEFKSHCID 312

Query: 169 ITEVYQEVEALFQDHPDLLEEFTHFLP 195
              V + V  LF+ H +L+  F  FLP
Sbjct: 313 TPGVIERVSTLFKGHTELIYGFNMFLP 339



 Score = 42.7 bits (99), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 13/92 (14%)

Query: 31  VVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDF-KAQRIDTAG---- 85
           ++ G  G   Q +  N A+ Y+  +K+ FQ++  KY  FLE++  + K Q++   G    
Sbjct: 559 ILLGETGQQNQPVEFNHAITYVNKIKNRFQNQPAKYKKFLEILHAYQKEQKVMKEGSLNQ 618

Query: 86  --------VIARVKELFKGHRDLILGFNTFLP 109
                   V  +V +LF    DL+  F  FLP
Sbjct: 619 GKMLTEQEVYTQVAKLFGQDEDLLREFGQFLP 650


>gi|390339395|ref|XP_787530.3| PREDICTED: paired amphipathic helix protein Sin3b-like
           [Strongylocentrotus purpuratus]
          Length = 1307

 Score =  199 bits (505), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 127/404 (31%), Positives = 202/404 (50%), Gaps = 75/404 (18%)

Query: 352 ELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFL 409
           E +F +KV+  L     Y  FLRCL L+ +EII+R+EL  LV              N FL
Sbjct: 507 EFAFFDKVRKALNSQQVYDNFLRCLLLFNQEIISRAELVQLV--------------NPFL 552

Query: 410 ARCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRLD 469
            +  +      + +  K         +S K+E   + ++R + +                
Sbjct: 553 GKFPELYRWFKEFLGYK---------ESDKIEPPHQPKERSQGE---------------- 587

Query: 470 KSVAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTE 529
                          +Y+           E+D SNC+RC  SYR LPK+Y  P  + RT 
Sbjct: 588 ---------------LYT-----------EIDFSNCKRCGASYRALPKSYQQPKCTGRTG 621

Query: 530 LGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEE 589
           L  +V+ND WVS  S SED +F   RK QYEE ++RCED+R+ELD+++E  + T + +E 
Sbjct: 622 LCNQVINDTWVSFPSWSEDSTFVASRKTQYEEHIYRCEDERYELDIVIEINSHTIRVLEH 681

Query: 590 LLEKINNNTIKTDGPIRVEDHFT----ALNLRCIERLYGDHGLDVMDVLRKNASLALPVI 645
           + +K++  + +     R+++        ++ + I+R+YGD   D+++ L+KN ++A+P++
Sbjct: 682 VSKKLSRMSPEESSKFRLDNSLGGTSEVIHRKAIQRIYGDKAADIIEGLKKNPAVAVPLV 741

Query: 646 LTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKE 705
           L RLK K++EW   + +FNK+W E   K Y KSLDH+   FKQ D K+L +K+L  EI+ 
Sbjct: 742 LKRLKLKEDEWREAQRNFNKIWREQNEKYYLKSLDHQGLNFKQNDVKALRSKSLLNEIEA 801

Query: 706 ISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLI 749
           I  ++++     L           PHL   + D    ED   LI
Sbjct: 802 IFYERQEG----LGTGENGAGLCGPHLSLPFMDRQFMEDASSLI 841



 Score = 97.1 bits (240), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 45/79 (56%), Positives = 57/79 (72%)

Query: 42  KLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLI 101
           +L   DAL+YL  VK  F  + + Y+DFL++MK+FK+Q IDT GVI RV  LFKGH DLI
Sbjct: 148 RLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVINRVSNLFKGHPDLI 207

Query: 102 LGFNTFLPKGYEITLPLED 120
           +GFNTFLP GY+I +   D
Sbjct: 208 VGFNTFLPPGYKIEVQAND 226



 Score = 79.7 bits (195), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 48/147 (32%), Positives = 72/147 (48%), Gaps = 30/147 (20%)

Query: 122 QPPPKKP-------------VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKS 168
           QPPP                VEF  AI +V +IK RFQ    +YK+FL IL+ Y+KE + 
Sbjct: 329 QPPPAAAQTSPQQSQIGPXGVEFNHAITYVKQIKNRFQNQPEIYKAFLGILHTYQKEQRI 388

Query: 169 I-------------TEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILR 215
           +             T+V+ +V  LF++  DLL+EF HFLPD++GA  +    +    + R
Sbjct: 389 VKESGGTYQPSLSETQVFSQVSKLFENQEDLLKEFGHFLPDANGAVGL----ASSFGLGR 444

Query: 216 DRSSAMPTARQVHVDKKERAMASHADR 242
           D  S++    +    KK R    H+ +
Sbjct: 445 DNLSSILVRSEHSETKKPRQTPKHSSQ 471



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 40/67 (59%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           ++ E+A+++++++K +F     VY  FLDI+  ++ ++     V   V  LF+ HPDL+ 
Sbjct: 149 LKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVINRVSNLFKGHPDLIV 208

Query: 189 EFTHFLP 195
            F  FLP
Sbjct: 209 GFNTFLP 215



 Score = 44.3 bits (103), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 13/84 (15%)

Query: 39  GAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDF-KAQRI--DTAG---------- 85
           G   +  N A+ Y+K +K+ FQ++ E Y  FL ++  + K QRI  ++ G          
Sbjct: 345 GPXGVEFNHAITYVKQIKNRFQNQPEIYKAFLGILHTYQKEQRIVKESGGTYQPSLSETQ 404

Query: 86  VIARVKELFKGHRDLILGFNTFLP 109
           V ++V +LF+   DL+  F  FLP
Sbjct: 405 VFSQVSKLFENQEDLLKEFGHFLP 428


>gi|339241047|ref|XP_003376449.1| paired amphipathic helix repeat family protein [Trichinella
           spiralis]
 gi|316974834|gb|EFV58306.1| paired amphipathic helix repeat family protein [Trichinella
           spiralis]
          Length = 1558

 Score =  198 bits (504), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 218/791 (27%), Positives = 320/791 (40%), Gaps = 191/791 (24%)

Query: 36  GGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFK 95
           GG         DA+ +L+ VK+ + +K + Y++FLE MK+FK QR+DTA V+ RV  LF 
Sbjct: 149 GGPSHSSSVPTDAMGFLERVKEQYINKPDVYNEFLETMKEFKEQRLDTAAVLKRVAVLFH 208

Query: 96  GHRDLILGFNTFLPKGY----------EITL-------------PLEDEQPPP------- 125
           G   LILGFNTFLP GY          EI L              L  E+  P       
Sbjct: 209 GMPHLILGFNTFLPPGYRVDVHGDRAEEIILYTPSGHVLSFSESDLLTERRDPGTACLPC 268

Query: 126 -----------KKPV--EFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI--- 169
                        PV  EF  A+N+VNKIKTRF     VY +FL +L  Y+K+N ++   
Sbjct: 269 VSIKQHSILDQSNPVLGEFSFALNYVNKIKTRFSDRPEVYDAFLKVLKEYQKDNAALLRT 328

Query: 170 -----------TEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRS 218
                      T ++ EV  LF    DLL+EF  FLPD+S     H         +R   
Sbjct: 329 NASLAEKSALDTRIFTEVSNLFAKDQDLLDEFVQFLPDASSMEVPH------QPGVRMGP 382

Query: 219 SAMPTARQVHVDKKERAMASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERRDDH 278
           S  P +R                   + D P     R     +       E   +  D  
Sbjct: 383 SLSPLSR-------------------NDDSPQLSMRRPPSTENPSSSSSNESLVDSSDMP 423

Query: 279 RRERERDDRDFENDVNRDFSMQRFPHKRKSARKIEDSTAEPLHQGGEGDENFGMHPVSS- 337
           R ER    R +    NR    +R P  R  +R  +  T   +             PV S 
Sbjct: 424 RHERRSCQRRY----NRTTRQKRSPSFRLESRVSKRRTQADM-------------PVESI 466

Query: 338 SYDDKNAMKSMFSQELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLL 395
            Y   +   S   +E +F  K++D L  D  Y  F+  L LY  + +T + +        
Sbjct: 467 CYSSVDRPLSPAVREYAFFSKLRDILSTDDLYSAFICVLKLYVDDYLTANAI-------- 518

Query: 396 GRYPDLMDGFNGFLARCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGV 455
                 +D F   L    K+E L + +      +N               D D   ++ V
Sbjct: 519 ------VDVFQMNLPLSNKNELLTSWI---TEFFNSS-------------DADSSTENAV 556

Query: 456 KDRDREAREKDRLDKSVAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLL 515
            + D  AR++                        + YL     +LD   C +  PSYR+L
Sbjct: 557 AEIDEAARQR-----------------------AETYL-----KLDFKTCRQEGPSYRVL 588

Query: 516 PKNYLIPSASQRTELGAEVLNDHWVSVTSG-SEDYSFKHMRKNQYEESLFRCEDDRFELD 574
           P   + P +S+R++L A VLND +VS     SED  F  M+K QYEE + R +D+ +E++
Sbjct: 589 PPESVPPRSSKRSQLSATVLNDVYVSFPLWQSEDTPFVAMKKTQYEEMMMRFDDELYEVE 648

Query: 575 MLLESVNVTTKRVEELLEKINNNTIKTDGPIR---------VEDHFTALNL--------- 616
           +L    N +    +E    INN    +   +           E+ F + +L         
Sbjct: 649 LL----NTSYSFSDEHANMINNVYKYSITAVEDILSHLCEMPEEAFNSFSLNDYSGKTII 704

Query: 617 -RCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNY 675
            R ++ LYG    +++  +  +    LPVIL RLK+K  E        + ++     K Y
Sbjct: 705 WRALKNLYGSRTEEMLTYVNADPIATLPVILMRLKEKSIEARAQAQTCDLLYRRDCEKIY 764

Query: 676 HKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEFE 735
            +SLDH    FK  DSK++  +AL  EI  I +    E     A + G R +  PH++  
Sbjct: 765 WRSLDHVGQQFKLADSKAIRTRALVTEIDSIYDAVDSE-----AESRGVRPTARPHIQL- 818

Query: 736 YSDPDIHEDLY 746
            + PD HE L+
Sbjct: 819 -TLPDNHEILF 828


>gi|115465753|ref|NP_001056476.1| Os05g0588700 [Oryza sativa Japonica Group]
 gi|113580027|dbj|BAF18390.1| Os05g0588700 [Oryza sativa Japonica Group]
          Length = 858

 Score =  198 bits (503), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 121/307 (39%), Positives = 171/307 (55%), Gaps = 36/307 (11%)

Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQ 558
           ++D SNC+ CTPSY LLPKN +   +S +TELG  +LND  VSVTSG ED  +K   KNQ
Sbjct: 284 KVDPSNCKHCTPSYCLLPKNCVTLQSSYQTELGRSILNDSLVSVTSGRED-CYKFRTKNQ 342

Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFTALNLRC 618
           YEE++F+CEDD FE DMLL+    T   +E+L  +  +N       +++++H T L+ RC
Sbjct: 343 YEENMFKCEDDLFESDMLLQRFRATADFIEDLQYRFGSN-------VKIQEHLTPLHKRC 395

Query: 619 IERLYGDHGLDVMDVL--RKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYH 676
           IE+LY D G+D++D L   +N S AL VIL+RL QK  +++  R   NK+  +  + NY+
Sbjct: 396 IEQLYDDSGIDMLDALSESENTSSALAVILSRLNQKIGDFSEARLSLNKMCPDTVANNYY 455

Query: 677 KSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEFEY 736
           +SLDH S  FKQ D + +  KAL AE K+IS  K                         +
Sbjct: 456 RSLDHCSPSFKQLDMERMSPKALLAEDKQISRIK------------------------SH 491

Query: 737 SDPDIHEDLYQLIKYSCGEMCTTEQLDKVMKIWTTFLEPMLGVPSRPQGAEDTEDVVKAK 796
           +D  IHED+  +I Y+    C+TE  DK M  WT  ++  + V  +    +DT       
Sbjct: 492 TDIHIHEDVGVIINYAYSRSCSTE--DKPMMNWTKLVKAFVSVKFQWPDLKDTVSRRNVC 549

Query: 797 SHTVKSR 803
            H   SR
Sbjct: 550 EHCGMSR 556



 Score = 43.5 bits (101), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 40/153 (26%), Positives = 69/153 (45%), Gaps = 20/153 (13%)

Query: 47  DALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQR---IDTAGVIARVKELFKGHRDLILG 103
           + + +L  VK    D  + Y  F+  M   + QR   I+    I  + E+  G  + I  
Sbjct: 27  ETMEFLVLVKSELPD--DVYSHFVRSMIKIRRQRNMSIEKCKEI--ILEILDGQPEAIQV 82

Query: 104 FNTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDIL-NMY 162
           F  F+ +GY            P +     +A NFV ++K         + + L++L   Y
Sbjct: 83  FEHFI-QGYS-----------PCRAKMRSKAHNFVERVKACPDISREDFHALLNVLAKYY 130

Query: 163 RKENKSITEVYQEVEALFQDHPDLLEEFTHFLP 195
           + E K+  EV ++VE +  ++P+ LEEF  F+P
Sbjct: 131 KNEIKTSEEVLEKVERIIGNYPEFLEEFKIFVP 163


>gi|125553524|gb|EAY99233.1| hypothetical protein OsI_21192 [Oryza sativa Indica Group]
          Length = 846

 Score =  197 bits (502), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 121/307 (39%), Positives = 171/307 (55%), Gaps = 36/307 (11%)

Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQ 558
           ++D SNC+ CTPSY LLPKN +   +S +TELG  +LND   SVTSG ED  +K   KNQ
Sbjct: 256 KVDPSNCKHCTPSYCLLPKNCVTLQSSYQTELGRSILNDSLASVTSGRED-CYKFRTKNQ 314

Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFTALNLRC 618
           YEE++F+CEDD FE DMLL+    T   +E+L  +  +N       +++++H T L+ RC
Sbjct: 315 YEENMFKCEDDLFESDMLLQRFRATADFIEDLQYRFGSN-------VKIQEHLTPLHKRC 367

Query: 619 IERLYGDHGLDVMDVLRK--NASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYH 676
           IE+LY D G+D++D L +  N S AL VIL+RL QK  +++  R   NK+  +  + NY+
Sbjct: 368 IEQLYDDSGIDMLDALSESENTSSALAVILSRLNQKIGDFSEARLSLNKMCPDTVANNYY 427

Query: 677 KSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEFEY 736
           +SLDH S  FKQ D + +  KAL AE K+IS+ K                         +
Sbjct: 428 RSLDHCSPSFKQLDMERMSPKALLAEDKQISQIK------------------------SH 463

Query: 737 SDPDIHEDLYQLIKYSCGEMCTTEQLDKVMKIWTTFLEPMLGVPSRPQGAEDTEDVVKAK 796
           +D  IHED+  +I Y+    CTTE  DK M  WT  ++  + V  +    +DT       
Sbjct: 464 TDIHIHEDVGVIINYAYSRSCTTE--DKPMMNWTKLVKAFVSVKFQWPDLKDTVSRRNVC 521

Query: 797 SHTVKSR 803
            H   SR
Sbjct: 522 EHCGMSR 528



 Score = 42.0 bits (97), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 20/151 (13%)

Query: 49  LAYLKAVKDIFQDKREKYDDFLEVMKDFKAQR---IDTAGVIARVKELFKGHRDLILGFN 105
           + +L  VK    D  + Y  F+  M   + QR   I+    I  + E+  G  + I  F 
Sbjct: 1   MEFLVLVKSELPD--DVYSHFVRSMIKIRRQRNMSIEKCKEI--ILEILDGQPEAIQVFE 56

Query: 106 TFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDIL-NMYRK 164
            F+ +GY            P +     +A NFV ++K         + + L++L   Y+ 
Sbjct: 57  HFI-QGYS-----------PCRAKMRSKAHNFVERVKACPDISREDFHALLNVLAKYYKN 104

Query: 165 ENKSITEVYQEVEALFQDHPDLLEEFTHFLP 195
           E K+  EV ++VE +  ++P+ LEEF  F+P
Sbjct: 105 EIKTSEEVLEKVERIIGNYPEFLEEFKIFVP 135


>gi|24653102|ref|NP_725189.1| Sin3A, isoform D [Drosophila melanogaster]
 gi|21627312|gb|AAM68625.1| Sin3A, isoform D [Drosophila melanogaster]
          Length = 1751

 Score =  197 bits (501), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 128/404 (31%), Positives = 201/404 (49%), Gaps = 59/404 (14%)

Query: 354  SFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLAR 411
            +F +KV+  LR    Y  FLRCL L+ +EI++++EL  LV   L ++PDL+  F      
Sbjct: 923  AFFDKVRKALRSPEVYDNFLRCLTLFNQEIVSKTELLGLVSPFLMKFPDLLRWFT----- 977

Query: 412  CEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRLDKS 471
                     D +   S    G +   + +    R      +      DR           
Sbjct: 978  ---------DFLGPPSGQPAGGLIDGMPLAATQRQGGGSSNS---SHDR----------- 1014

Query: 472  VAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELG 531
                            +  +  A+ +Q++DLS+C+R   SY  LP++ +    S RT L 
Sbjct: 1015 ---------------GTSHQSAAEYVQDVDLSSCKRLGASYCALPQSTVPKKCSGRTALC 1059

Query: 532  AEVLNDHWVSV-TSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEEL 590
             EVLND WVS  T  SED +F   RK Q+EE+++R ED+RFELD+++E  + T + +E L
Sbjct: 1060 REVLNDKWVSFPTWASEDSTFVTSRKTQFEETIYRTEDERFELDLVIEVNSATIRVLENL 1119

Query: 591  LEKINNNTIKTDGPIRVEDHFTA----LNLRCIERLYGDHGLDVMDVLRKNASLALPVIL 646
             +K++  + +      ++DH       ++ R I R+YGD   +++  ++KN  +A+P++L
Sbjct: 1120 QKKMSRMSTEELSKFHLDDHLGGTSQTIHQRAIHRIYGDKSGEIITGMKKNPFVAVPIVL 1179

Query: 647  TRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEI 706
             RLK K+EEW   +  FNK W E   K Y KSLDH++  FK  D K+L +K+L  EI+ +
Sbjct: 1180 KRLKVKEEEWREAQKTFNKQWREQNEKYYLKSLDHQAINFKPNDMKALRSKSLFNEIETL 1239

Query: 707  -SEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLI 749
              E+  +EDD +            PHL   Y D  I +D   L+
Sbjct: 1240 YDERHDQEDDAMEPFG--------PHLVLPYKDKTILDDAANLL 1275



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 49/114 (42%), Positives = 65/114 (57%), Gaps = 9/114 (7%)

Query: 25  PSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTA 84
           P G T    G  G    +L   DAL+YL  VK  + D+ + Y++FL++MK+FK+  IDT 
Sbjct: 252 PVGGTTPPQGQSGNATPRLKVEDALSYLDQVKYQYADQPQIYNNFLDIMKEFKSHCIDTP 311

Query: 85  GVIARVKELFKGHRDLILGFNTFLPKGYEI---------TLPLEDEQPPPKKPV 129
           GVI RV  LFKGH +LI GFN FLP GY+I         ++P+     PP  P 
Sbjct: 312 GVIERVSTLFKGHTELIYGFNMFLPPGYKIEIHSDALGCSVPVVSMPSPPGAPT 365



 Score = 73.6 bits (179), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 40/93 (43%), Positives = 51/93 (54%), Gaps = 13/93 (13%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI-------------TEVY 173
           +PVEF  AI +VNKIK RFQ     YK FL+IL+ Y++E K +              EVY
Sbjct: 565 QPVEFNHAITYVNKIKNRFQNQPAKYKKFLEILHDYQREQKVMKEGSLNQGKMLTEQEVY 624

Query: 174 QEVEALFQDHPDLLEEFTHFLPDSSGAASIHYV 206
            +V  LF    DLL EF  FLPD++   S  Y+
Sbjct: 625 TQVAKLFGQDEDLLREFGQFLPDATNHQSGQYM 657



 Score = 47.8 bits (112), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 21/87 (24%), Positives = 46/87 (52%), Gaps = 6/87 (6%)

Query: 115 TLPLEDEQPPPKKP------VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKS 168
           ++P+    PP  +       ++ E+A+++++++K ++     +Y +FLDI+  ++     
Sbjct: 250 SIPVGGTTPPQGQSGNATPRLKVEDALSYLDQVKYQYADQPQIYNNFLDIMKEFKSHCID 309

Query: 169 ITEVYQEVEALFQDHPDLLEEFTHFLP 195
              V + V  LF+ H +L+  F  FLP
Sbjct: 310 TPGVIERVSTLFKGHTELIYGFNMFLP 336



 Score = 43.9 bits (102), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 13/92 (14%)

Query: 31  VVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDF-KAQRIDTAG---- 85
           ++ G  G   Q +  N A+ Y+  +K+ FQ++  KY  FLE++ D+ + Q++   G    
Sbjct: 555 ILLGETGQQNQPVEFNHAITYVNKIKNRFQNQPAKYKKFLEILHDYQREQKVMKEGSLNQ 614

Query: 86  --------VIARVKELFKGHRDLILGFNTFLP 109
                   V  +V +LF    DL+  F  FLP
Sbjct: 615 GKMLTEQEVYTQVAKLFGQDEDLLREFGQFLP 646



 Score = 42.7 bits (99), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 42/91 (46%), Gaps = 15/91 (16%)

Query: 123 PPPKKP------VEFEEAIN--------FVNKIKTRFQGDDHVYKSFLDILNMYRKENKS 168
           PP K+P      V F EA +        F +K++   +  + VY +FL  L ++ +E  S
Sbjct: 896 PPAKRPKPYCRDVSFSEASSKCTISDAAFFDKVRKALRSPE-VYDNFLRCLTLFNQEIVS 954

Query: 169 ITEVYQEVEALFQDHPDLLEEFTHFLPDSSG 199
            TE+   V       PDLL  FT FL   SG
Sbjct: 955 KTELLGLVSPFLMKFPDLLRWFTDFLGPPSG 985


>gi|405950657|gb|EKC18631.1| Paired amphipathic helix protein Sin3b [Crassostrea gigas]
          Length = 1280

 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 135/405 (33%), Positives = 200/405 (49%), Gaps = 76/405 (18%)

Query: 352 ELSFCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFL 409
           E +F +KV+  L+  + Y+ FLRCL L+ +E+I+R+E              L+     FL
Sbjct: 415 EFAFFDKVRKFLKHPEVYENFLRCLVLFNQEVISRTE--------------LVQLVQTFL 460

Query: 410 ARCEKSEELLADVMS-KKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRL 468
            R  +  +   D +  K+S      +P+                         A  K+R+
Sbjct: 461 QRSPELYKWFKDFLGYKESGGTTEAVPQG------------------------ALGKERV 496

Query: 469 DKSVAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRT 528
              +A                         E+D + C+R   SYR LPK+Y  P  S R+
Sbjct: 497 SGELAM------------------------EIDYATCKRYGASYRALPKSYPQPKCSGRS 532

Query: 529 ELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVE 588
            L  EVLND WVS  S SED +F   RK QYEE ++RCED+RFELD+++E+   T + +E
Sbjct: 533 PLCREVLNDTWVSFPSWSEDSTFVTSRKTQYEEHIYRCEDERFELDVVIETNLATIRCLE 592

Query: 589 ELLEKINNNTIKTDGPIRVEDHFTA----LNLRCIERLYGDHGLDVMDVLRKNASLALPV 644
            + +K+   + +     R+++        L  + I+R+YGD   D++D L+KN  +A+P+
Sbjct: 593 AVQKKMGRMSSEEAAKFRLDNALGGSSDVLQRKAIQRIYGDKAPDIIDGLKKNPVVAVPL 652

Query: 645 ILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIK 704
           +L RLK K+EEW   + DFNK W E   K Y KSLDH+   FKQ D K++ +KAL  EI+
Sbjct: 653 VLRRLKAKEEEWREAQRDFNKYWREQNEKYYLKSLDHQGINFKQNDIKAIRSKALLNEIE 712

Query: 705 EISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLI 749
            I + +R E D   A A        PHL + Y D  + ED   LI
Sbjct: 713 TIYD-ERSEQDTETAEAFN------PHLSYVYKDRSVIEDASSLI 750



 Score = 97.4 bits (241), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 44/73 (60%), Positives = 56/73 (76%)

Query: 42  KLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLI 101
           +L   DAL+YL  VK  F ++ + Y+DFL++MK+FK+Q IDT GVI RV  LFKGH DLI
Sbjct: 67  RLKVEDALSYLDQVKLQFGNQPQVYNDFLDIMKEFKSQTIDTPGVINRVSNLFKGHPDLI 126

Query: 102 LGFNTFLPKGYEI 114
           +GFNTFLP GY+I
Sbjct: 127 VGFNTFLPPGYKI 139



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 43/92 (46%), Positives = 58/92 (63%), Gaps = 14/92 (15%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI--------------TEVYQ 174
           VEF  AIN+VNKIK RFQG   +YK+FL+IL+ Y+KE +++               EVY 
Sbjct: 240 VEFNHAINYVNKIKNRFQGQPEIYKAFLEILHTYQKEQRNLKEGIVSPACKPLTEAEVYS 299

Query: 175 EVEALFQDHPDLLEEFTHFLPDSSGAASIHYV 206
           +V  LFQ+  DLL EF  FLPD++G+A   Y+
Sbjct: 300 QVAKLFQNQEDLLAEFGQFLPDANGSAYGGYL 331



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 39/67 (58%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           ++ E+A+++++++K +F     VY  FLDI+  ++ +      V   V  LF+ HPDL+ 
Sbjct: 68  LKVEDALSYLDQVKLQFGNQPQVYNDFLDIMKEFKSQTIDTPGVINRVSNLFKGHPDLIV 127

Query: 189 EFTHFLP 195
            F  FLP
Sbjct: 128 GFNTFLP 134



 Score = 42.7 bits (99), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 14/78 (17%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDF-KAQR-------------IDTAGVIARVK 91
           N A+ Y+  +K+ FQ + E Y  FLE++  + K QR             +  A V ++V 
Sbjct: 243 NHAINYVNKIKNRFQGQPEIYKAFLEILHTYQKEQRNLKEGIVSPACKPLTEAEVYSQVA 302

Query: 92  ELFKGHRDLILGFNTFLP 109
           +LF+   DL+  F  FLP
Sbjct: 303 KLFQNQEDLLAEFGQFLP 320


>gi|2570796|gb|AAB82274.1| transcriptional co-repressor SIN3A [Drosophila melanogaster]
          Length = 1751

 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 128/404 (31%), Positives = 201/404 (49%), Gaps = 59/404 (14%)

Query: 354  SFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLAR 411
            +F +KV+  LR    Y  FLRCL L+ +EI++++EL  LV   L ++PDL+  F      
Sbjct: 920  AFFDKVRKALRSPEVYDNFLRCLTLFNQEIVSKTELLGLVSPFLMKFPDLLRWFT----- 974

Query: 412  CEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRLDKS 471
                     D +   S    G +   + +    R      +      DR           
Sbjct: 975  ---------DFLGPPSGQPAGGLIDGMPLAATQRQGGGSSNS---SHDR----------- 1011

Query: 472  VAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELG 531
                            +  +  A+ +Q++DLS+C+R   SY  LP++ +    S RT L 
Sbjct: 1012 ---------------GTSHQSAAEYVQDVDLSSCKRLGASYCALPQSTVPKKCSGRTALC 1056

Query: 532  AEVLNDHWVSV-TSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEEL 590
             EVLND WVS  T  SED +F   RK Q+EE+++R ED+RFELD+++E  + T + +E L
Sbjct: 1057 REVLNDKWVSFPTWASEDSTFVTSRKTQFEETIYRTEDERFELDLVIEVNSATIRVLENL 1116

Query: 591  LEKINNNTIKTDGPIRVEDHFTA----LNLRCIERLYGDHGLDVMDVLRKNASLALPVIL 646
             +K++  + +      ++DH       ++ R I R+YGD   +++  ++KN  +A+P++L
Sbjct: 1117 QKKMSRMSTEELSKFHLDDHLGGTSQTIHQRAIHRIYGDKSGEIITGMKKNPFVAVPIVL 1176

Query: 647  TRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEI 706
             RLK K+EEW   +  FNK W E   K Y KSLDH++  FK  D K+L +K+L  EI+ +
Sbjct: 1177 KRLKVKEEEWREAQKTFNKQWREQNEKYYLKSLDHQAINFKPNDMKALRSKSLFNEIETL 1236

Query: 707  -SEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLI 749
              E+  +EDD +            PHL   Y D  I +D   L+
Sbjct: 1237 YDERHDQEDDAMEPFG--------PHLVLPYKDKTILDDAANLL 1272



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 49/114 (42%), Positives = 65/114 (57%), Gaps = 9/114 (7%)

Query: 25  PSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTA 84
           P G T    G  G    +L   DAL+YL  VK  + D+ + Y++FL++MK+FK+  IDT 
Sbjct: 252 PVGGTTPPQGQSGNATPRLKVEDALSYLDQVKYQYADQPQIYNNFLDIMKEFKSHCIDTP 311

Query: 85  GVIARVKELFKGHRDLILGFNTFLPKGYEI---------TLPLEDEQPPPKKPV 129
           GVI RV  LFKGH +LI GFN FLP GY+I         ++P+     PP  P 
Sbjct: 312 GVIERVSTLFKGHTELIYGFNMFLPPGYKIEIHSDALGCSVPVVSMPSPPGAPT 365



 Score = 73.2 bits (178), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 40/93 (43%), Positives = 51/93 (54%), Gaps = 13/93 (13%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI-------------TEVY 173
           +PVEF  AI +VNKIK RFQ     YK FL+IL+ Y++E K +              EVY
Sbjct: 562 QPVEFNHAITYVNKIKNRFQNQPAKYKKFLEILHDYQREQKVMKEGSLNQGKMLTEQEVY 621

Query: 174 QEVEALFQDHPDLLEEFTHFLPDSSGAASIHYV 206
            +V  LF    DLL EF  FLPD++   S  Y+
Sbjct: 622 TQVAKLFGQDEDLLREFGQFLPDATNHQSGQYM 654



 Score = 47.8 bits (112), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 21/87 (24%), Positives = 46/87 (52%), Gaps = 6/87 (6%)

Query: 115 TLPLEDEQPPPKKP------VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKS 168
           ++P+    PP  +       ++ E+A+++++++K ++     +Y +FLDI+  ++     
Sbjct: 250 SIPVGGTTPPQGQSGNATPRLKVEDALSYLDQVKYQYADQPQIYNNFLDIMKEFKSHCID 309

Query: 169 ITEVYQEVEALFQDHPDLLEEFTHFLP 195
              V + V  LF+ H +L+  F  FLP
Sbjct: 310 TPGVIERVSTLFKGHTELIYGFNMFLP 336



 Score = 43.5 bits (101), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 13/82 (15%)

Query: 41  QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDF-KAQRIDTAG------------VI 87
           Q +  N A+ Y+  +K+ FQ++  KY  FLE++ D+ + Q++   G            V 
Sbjct: 562 QPVEFNHAITYVNKIKNRFQNQPAKYKKFLEILHDYQREQKVMKEGSLNQGKMLTEQEVY 621

Query: 88  ARVKELFKGHRDLILGFNTFLP 109
            +V +LF    DL+  F  FLP
Sbjct: 622 TQVAKLFGQDEDLLREFGQFLP 643



 Score = 42.7 bits (99), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 42/91 (46%), Gaps = 15/91 (16%)

Query: 123 PPPKKP------VEFEEAIN--------FVNKIKTRFQGDDHVYKSFLDILNMYRKENKS 168
           PP K+P      V F EA +        F +K++   +  + VY +FL  L ++ +E  S
Sbjct: 893 PPAKRPKPYCRDVSFSEASSKCTISDAAFFDKVRKALRSPE-VYDNFLRCLTLFNQEIVS 951

Query: 169 ITEVYQEVEALFQDHPDLLEEFTHFLPDSSG 199
            TE+   V       PDLL  FT FL   SG
Sbjct: 952 KTELLGLVSPFLMKFPDLLRWFTDFLGPPSG 982


>gi|222632743|gb|EEE64875.1| hypothetical protein OsJ_19732 [Oryza sativa Japonica Group]
          Length = 846

 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 125/325 (38%), Positives = 180/325 (55%), Gaps = 39/325 (12%)

Query: 481 PKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWV 540
           P +   +S++  L  P++ +D SNC+ CTPSY LLPKN +   +S +TELG  +LND  V
Sbjct: 241 PLLQWSTSRENEL--PLK-VDPSNCKHCTPSYCLLPKNCVTLQSSYQTELGRSILNDSLV 297

Query: 541 SVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIK 600
           SVTSG ED  +K   KNQYEE++F+CEDD FE DMLL+    T   +E+L  +  +N   
Sbjct: 298 SVTSGRED-CYKFRTKNQYEENMFKCEDDLFESDMLLQRFRATADFIEDLQYRFGSN--- 353

Query: 601 TDGPIRVEDHFTALNLRCIERLYGDHGLDVMDVL--RKNASLALPVILTRLKQKQEEWAR 658
               +++++H T L+ RCIE+LY D G+D++D L   +N S AL VIL+RL QK  +++ 
Sbjct: 354 ----VKIQEHLTPLHKRCIEQLYDDSGIDMLDALSESENTSSALAVILSRLNQKIGDFSE 409

Query: 659 CRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLL 718
            R   NK+  +  + NY++SLDH S  FKQ D + +  KAL AE K+IS  K        
Sbjct: 410 ARLSLNKMCPDTVANNYYRSLDHCSPSFKQLDMERMSPKALLAEDKQISRIK-------- 461

Query: 719 AIAAGNRRSIVPHLEFEYSDPDIHEDLYQLIKYSCGEMCTTEQLDKVMKIWTTFLEPMLG 778
                            ++D  IHED+  +I Y+    C+TE  DK M  WT  ++  + 
Sbjct: 462 ----------------SHTDIHIHEDVGVIINYAYSRSCSTE--DKPMMNWTKLVKAFVS 503

Query: 779 VPSRPQGAEDTEDVVKAKSHTVKSR 803
           V  +    +DT        H   SR
Sbjct: 504 VKFQWPDLKDTVSRRNVCEHCGMSR 528



 Score = 42.0 bits (97), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 20/151 (13%)

Query: 49  LAYLKAVKDIFQDKREKYDDFLEVMKDFKAQR---IDTAGVIARVKELFKGHRDLILGFN 105
           + +L  VK    D  + Y  F+  M   + QR   I+    I  + E+  G  + I  F 
Sbjct: 1   MEFLVLVKSELPD--DVYSHFVRSMIKIRRQRNMSIEKCKEI--ILEILDGQPEAIQVFE 56

Query: 106 TFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDIL-NMYRK 164
            F+ +GY            P +     +A NFV ++K         + + L++L   Y+ 
Sbjct: 57  HFI-QGYS-----------PCRAKMRSKAHNFVERVKACPDISREDFHALLNVLAKYYKN 104

Query: 165 ENKSITEVYQEVEALFQDHPDLLEEFTHFLP 195
           E K+  EV ++VE +  ++P+ LEEF  F+P
Sbjct: 105 EIKTSEEVLEKVERIIGNYPEFLEEFKIFVP 135


>gi|2570794|gb|AAB82273.1| transcriptional co-repressor SIN3A [Drosophila melanogaster]
          Length = 1773

 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 128/404 (31%), Positives = 201/404 (49%), Gaps = 59/404 (14%)

Query: 354  SFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLAR 411
            +F +KV+  LR    Y  FLRCL L+ +EI++++EL  LV   L ++PDL+  F      
Sbjct: 920  AFFDKVRKALRSPEVYDNFLRCLTLFNQEIVSKTELLGLVSPFLMKFPDLLRWFT----- 974

Query: 412  CEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRLDKS 471
                     D +   S    G +   + +    R      +      DR           
Sbjct: 975  ---------DFLGPPSGQPAGGLIDGMPLAATQRQGGGSSNS---SHDR----------- 1011

Query: 472  VAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELG 531
                            +  +  A+ +Q++DLS+C+R   SY  LP++ +    S RT L 
Sbjct: 1012 ---------------GTSHQSAAEYVQDVDLSSCKRLGASYCALPQSTVPKKCSGRTALC 1056

Query: 532  AEVLNDHWVSV-TSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEEL 590
             EVLND WVS  T  SED +F   RK Q+EE+++R ED+RFELD+++E  + T + +E L
Sbjct: 1057 REVLNDKWVSFPTWASEDSTFVTSRKTQFEETIYRTEDERFELDLVIEVNSATIRVLENL 1116

Query: 591  LEKINNNTIKTDGPIRVEDHFTA----LNLRCIERLYGDHGLDVMDVLRKNASLALPVIL 646
             +K++  + +      ++DH       ++ R I R+YGD   +++  ++KN  +A+P++L
Sbjct: 1117 QKKMSRMSTEELSKFHLDDHLGGTSQTIHQRAIHRIYGDKSGEIITGMKKNPFVAVPIVL 1176

Query: 647  TRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEI 706
             RLK K+EEW   +  FNK W E   K Y KSLDH++  FK  D K+L +K+L  EI+ +
Sbjct: 1177 KRLKVKEEEWREAQKTFNKQWREQNEKYYLKSLDHQAINFKPNDMKALRSKSLFNEIETL 1236

Query: 707  -SEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLI 749
              E+  +EDD +            PHL   Y D  I +D   L+
Sbjct: 1237 YDERHDQEDDAMEPFG--------PHLVLPYKDKTILDDAANLL 1272



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 49/114 (42%), Positives = 65/114 (57%), Gaps = 9/114 (7%)

Query: 25  PSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTA 84
           P G T    G  G    +L   DAL+YL  VK  + D+ + Y++FL++MK+FK+  IDT 
Sbjct: 252 PVGGTTPPQGQSGNATPRLKVEDALSYLDQVKYQYADQPQIYNNFLDIMKEFKSHCIDTP 311

Query: 85  GVIARVKELFKGHRDLILGFNTFLPKGYEI---------TLPLEDEQPPPKKPV 129
           GVI RV  LFKGH +LI GFN FLP GY+I         ++P+     PP  P 
Sbjct: 312 GVIERVSTLFKGHTELIYGFNMFLPPGYKIEIHSDALGCSVPVVSMPSPPGAPT 365



 Score = 73.6 bits (179), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 40/93 (43%), Positives = 51/93 (54%), Gaps = 13/93 (13%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI-------------TEVY 173
           +PVEF  AI +VNKIK RFQ     YK FL+IL+ Y++E K +              EVY
Sbjct: 562 QPVEFNHAITYVNKIKNRFQNQPAKYKKFLEILHDYQREQKVMKEGSLNQGKMLTEQEVY 621

Query: 174 QEVEALFQDHPDLLEEFTHFLPDSSGAASIHYV 206
            +V  LF    DLL EF  FLPD++   S  Y+
Sbjct: 622 TQVAKLFGQDEDLLREFGQFLPDATNHQSGQYM 654



 Score = 47.8 bits (112), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 21/87 (24%), Positives = 46/87 (52%), Gaps = 6/87 (6%)

Query: 115 TLPLEDEQPPPKKP------VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKS 168
           ++P+    PP  +       ++ E+A+++++++K ++     +Y +FLDI+  ++     
Sbjct: 250 SIPVGGTTPPQGQSGNATPRLKVEDALSYLDQVKYQYADQPQIYNNFLDIMKEFKSHCID 309

Query: 169 ITEVYQEVEALFQDHPDLLEEFTHFLP 195
              V + V  LF+ H +L+  F  FLP
Sbjct: 310 TPGVIERVSTLFKGHTELIYGFNMFLP 336



 Score = 43.9 bits (102), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 13/82 (15%)

Query: 41  QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDF-KAQRIDTAG------------VI 87
           Q +  N A+ Y+  +K+ FQ++  KY  FLE++ D+ + Q++   G            V 
Sbjct: 562 QPVEFNHAITYVNKIKNRFQNQPAKYKKFLEILHDYQREQKVMKEGSLNQGKMLTEQEVY 621

Query: 88  ARVKELFKGHRDLILGFNTFLP 109
            +V +LF    DL+  F  FLP
Sbjct: 622 TQVAKLFGQDEDLLREFGQFLP 643



 Score = 43.1 bits (100), Expect = 0.92,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 42/91 (46%), Gaps = 15/91 (16%)

Query: 123 PPPKKP------VEFEEAIN--------FVNKIKTRFQGDDHVYKSFLDILNMYRKENKS 168
           PP K+P      V F EA +        F +K++   +  + VY +FL  L ++ +E  S
Sbjct: 893 PPAKRPKPYCRDVSFSEASSKCTISDAAFFDKVRKALRSPE-VYDNFLRCLTLFNQEIVS 951

Query: 169 ITEVYQEVEALFQDHPDLLEEFTHFLPDSSG 199
            TE+   V       PDLL  FT FL   SG
Sbjct: 952 KTELLGLVSPFLMKFPDLLRWFTDFLGPPSG 982


>gi|297838771|ref|XP_002887267.1| paired amphipathic helix repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297333108|gb|EFH63526.1| paired amphipathic helix repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 160

 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 101/155 (65%), Positives = 120/155 (77%), Gaps = 2/155 (1%)

Query: 41  QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDL 100
           +KLTTNDAL +LKAVKD +QD RE Y+ FL VMKDFKAQR  T  VI+RVKELFKG  +L
Sbjct: 5   KKLTTNDALDFLKAVKDKYQDNREIYERFLTVMKDFKAQRAHTCDVISRVKELFKGQPEL 64

Query: 101 ILGFNTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILN 160
           +LGFNTFLP G+EITL  +D++P   K   F++A  FVNK+KTRFQ +D V+KSFLD+L 
Sbjct: 65  LLGFNTFLPMGFEITLE-DDQRPSNLKSAHFDDAYEFVNKVKTRFQNND-VFKSFLDVLK 122

Query: 161 MYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLP 195
            Y+KENKS  E+YQEV  LFQ H DLLEEF  FLP
Sbjct: 123 TYKKENKSFAELYQEVAILFQGHQDLLEEFHQFLP 157


>gi|24653100|ref|NP_610799.2| Sin3A, isoform A [Drosophila melanogaster]
 gi|320543838|ref|NP_001188913.1| Sin3A, isoform F [Drosophila melanogaster]
 gi|21627311|gb|AAF58488.2| Sin3A, isoform A [Drosophila melanogaster]
 gi|318068576|gb|ADV37160.1| Sin3A, isoform F [Drosophila melanogaster]
          Length = 1776

 Score =  197 bits (500), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 128/404 (31%), Positives = 201/404 (49%), Gaps = 59/404 (14%)

Query: 354  SFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLAR 411
            +F +KV+  LR    Y  FLRCL L+ +EI++++EL  LV   L ++PDL+  F      
Sbjct: 923  AFFDKVRKALRSPEVYDNFLRCLTLFNQEIVSKTELLGLVSPFLMKFPDLLRWFT----- 977

Query: 412  CEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRLDKS 471
                     D +   S    G +   + +    R      +      DR           
Sbjct: 978  ---------DFLGPPSGQPAGGLIDGMPLAATQRQGGGSSNS---SHDR----------- 1014

Query: 472  VAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELG 531
                            +  +  A+ +Q++DLS+C+R   SY  LP++ +    S RT L 
Sbjct: 1015 ---------------GTSHQSAAEYVQDVDLSSCKRLGASYCALPQSTVPKKCSGRTALC 1059

Query: 532  AEVLNDHWVSV-TSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEEL 590
             EVLND WVS  T  SED +F   RK Q+EE+++R ED+RFELD+++E  + T + +E L
Sbjct: 1060 REVLNDKWVSFPTWASEDSTFVTSRKTQFEETIYRTEDERFELDLVIEVNSATIRVLENL 1119

Query: 591  LEKINNNTIKTDGPIRVEDHFTA----LNLRCIERLYGDHGLDVMDVLRKNASLALPVIL 646
             +K++  + +      ++DH       ++ R I R+YGD   +++  ++KN  +A+P++L
Sbjct: 1120 QKKMSRMSTEELSKFHLDDHLGGTSQTIHQRAIHRIYGDKSGEIITGMKKNPFVAVPIVL 1179

Query: 647  TRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEI 706
             RLK K+EEW   +  FNK W E   K Y KSLDH++  FK  D K+L +K+L  EI+ +
Sbjct: 1180 KRLKVKEEEWREAQKTFNKQWREQNEKYYLKSLDHQAINFKPNDMKALRSKSLFNEIETL 1239

Query: 707  -SEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLI 749
              E+  +EDD +            PHL   Y D  I +D   L+
Sbjct: 1240 YDERHDQEDDAMEPFG--------PHLVLPYKDKTILDDAANLL 1275



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 49/114 (42%), Positives = 65/114 (57%), Gaps = 9/114 (7%)

Query: 25  PSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTA 84
           P G T    G  G    +L   DAL+YL  VK  + D+ + Y++FL++MK+FK+  IDT 
Sbjct: 252 PVGGTTPPQGQSGNATPRLKVEDALSYLDQVKYQYADQPQIYNNFLDIMKEFKSHCIDTP 311

Query: 85  GVIARVKELFKGHRDLILGFNTFLPKGYEI---------TLPLEDEQPPPKKPV 129
           GVI RV  LFKGH +LI GFN FLP GY+I         ++P+     PP  P 
Sbjct: 312 GVIERVSTLFKGHTELIYGFNMFLPPGYKIEIHSDALGCSVPVVSMPSPPGAPT 365



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 40/93 (43%), Positives = 51/93 (54%), Gaps = 13/93 (13%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI-------------TEVY 173
           +PVEF  AI +VNKIK RFQ     YK FL+IL+ Y++E K +              EVY
Sbjct: 565 QPVEFNHAITYVNKIKNRFQNQPAKYKKFLEILHDYQREQKVMKEGSLNQGKMLTEQEVY 624

Query: 174 QEVEALFQDHPDLLEEFTHFLPDSSGAASIHYV 206
            +V  LF    DLL EF  FLPD++   S  Y+
Sbjct: 625 TQVAKLFGQDEDLLREFGQFLPDATNHQSGQYM 657



 Score = 47.8 bits (112), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 21/87 (24%), Positives = 46/87 (52%), Gaps = 6/87 (6%)

Query: 115 TLPLEDEQPPPKKP------VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKS 168
           ++P+    PP  +       ++ E+A+++++++K ++     +Y +FLDI+  ++     
Sbjct: 250 SIPVGGTTPPQGQSGNATPRLKVEDALSYLDQVKYQYADQPQIYNNFLDIMKEFKSHCID 309

Query: 169 ITEVYQEVEALFQDHPDLLEEFTHFLP 195
              V + V  LF+ H +L+  F  FLP
Sbjct: 310 TPGVIERVSTLFKGHTELIYGFNMFLP 336



 Score = 43.9 bits (102), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 13/92 (14%)

Query: 31  VVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDF-KAQRIDTAG---- 85
           ++ G  G   Q +  N A+ Y+  +K+ FQ++  KY  FLE++ D+ + Q++   G    
Sbjct: 555 ILLGETGQQNQPVEFNHAITYVNKIKNRFQNQPAKYKKFLEILHDYQREQKVMKEGSLNQ 614

Query: 86  --------VIARVKELFKGHRDLILGFNTFLP 109
                   V  +V +LF    DL+  F  FLP
Sbjct: 615 GKMLTEQEVYTQVAKLFGQDEDLLREFGQFLP 646



 Score = 42.7 bits (99), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 42/91 (46%), Gaps = 15/91 (16%)

Query: 123 PPPKKP------VEFEEAIN--------FVNKIKTRFQGDDHVYKSFLDILNMYRKENKS 168
           PP K+P      V F EA +        F +K++   +  + VY +FL  L ++ +E  S
Sbjct: 896 PPAKRPKPYCRDVSFSEASSKCTISDAAFFDKVRKALRSPE-VYDNFLRCLTLFNQEIVS 954

Query: 169 ITEVYQEVEALFQDHPDLLEEFTHFLPDSSG 199
            TE+   V       PDLL  FT FL   SG
Sbjct: 955 KTELLGLVSPFLMKFPDLLRWFTDFLGPPSG 985


>gi|242091555|ref|XP_002441610.1| hypothetical protein SORBIDRAFT_09g030290 [Sorghum bicolor]
 gi|241946895|gb|EES20040.1| hypothetical protein SORBIDRAFT_09g030290 [Sorghum bicolor]
          Length = 837

 Score =  197 bits (500), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 121/335 (36%), Positives = 190/335 (56%), Gaps = 16/335 (4%)

Query: 507 RCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRC 566
           R + SY LL KN L    S RTELG  +LND  VS TSG ED  FK   KN YEE++F+C
Sbjct: 244 RYSTSYSLLSKNCLTLKTSYRTELGQFILNDTLVSSTSGRED-CFKFRTKNHYEENIFKC 302

Query: 567 EDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFTALNLRCIERLYGDH 626
           EDD FE DMLL+    T   +  L + +       D  +++++  T L+ RCIE+LY +H
Sbjct: 303 EDDMFESDMLLQRYTATADFIRNLQDHV-------DKDMKIQERLTPLHRRCIEQLYDEH 355

Query: 627 GLDVMDVL--RKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSF 684
           GLD++D L  + + S+AL ++ +RL QK E+    +S  NK+ + I + NY+++LDHRS 
Sbjct: 356 GLDMLDALSEKIDTSMALVILQSRLNQKIEDLKEAQSSLNKICSNIIANNYYRALDHRSS 415

Query: 685 YFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHED 744
            FKQ D + +  KAL AE +EI+  +    D  L+ A  N+ +++    F+  +  IH+D
Sbjct: 416 SFKQLDKRRMSPKALLAEAREINMARLNNGDKHLS-ACNNQSTLISENVFKDINLHIHKD 474

Query: 745 LYQLIKYSCGEMCTTEQLDKVMKIWTTFLEPMLGVPSRPQGAEDTEDVVKAKSHTVKSRA 804
           + ++++Y+C + C +EQ  K+M IWTT ++P + +  + Q    T    +A  H   S+ 
Sbjct: 475 IDKMVRYAC-KSCPSEQ--KLMMIWTTLVQPFVSISCQLQELNGTVAPKEACEHCGLSKT 531

Query: 805 A--SVGDSDGSPDGDAAAMTSKHSNPSRNGDESIP 837
              S+ DS  + +   ++    +   + N   SIP
Sbjct: 532 FLRSIPDSSLANNYSLSSKRGGYLLNTSNKSASIP 566


>gi|291411620|ref|XP_002722089.1| PREDICTED: hypothetical protein [Oryctolagus cuniculus]
          Length = 1225

 Score =  196 bits (499), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 108/285 (37%), Positives = 166/285 (58%), Gaps = 11/285 (3%)

Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQ 558
           E+D ++C+R   SYR LPK+Y  P  + RT L  EVLND WVS  S SED +F   +K Q
Sbjct: 546 EIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVSSKKTQ 605

Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TAL 614
           YEE ++RCED+RFELD++LE+   T + +E + +K++  + +     R+++        +
Sbjct: 606 YEEHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSAEEQAKFRLDNTLGGTSEVI 665

Query: 615 NLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKN 674
           + + ++R+Y D   D++D LRKN S+A+P++L RLK K+EEW   +  FNKVW E   K 
Sbjct: 666 HRKALQRIYADKAADIIDGLRKNPSIAVPIVLKRLKMKEEEWREAQRGFNKVWREQNEKY 725

Query: 675 YHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEF 734
           Y KSLDH+   FKQ D+K L +K+L  EI+ I ++++++     A        + PHL  
Sbjct: 726 YLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQ-----ATEENAGAPVGPHLSL 780

Query: 735 EYSDPDIHEDLYQLIKYSCGEMCTTEQLD--KVMKIWTTFLEPML 777
            Y D  I ED   LI +        ++ D  K+ +I   F+  +L
Sbjct: 781 AYEDKQILEDAAALIIHHVKRQTGIQKEDKYKIKQIMHHFIPDLL 825



 Score =  102 bits (253), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 46/80 (57%), Positives = 60/80 (75%)

Query: 41  QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDL 100
           Q+L   DAL+YL  VK  F  + + Y+DFL++MK+FK+Q IDT GVI+RV +LFKGH DL
Sbjct: 119 QRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDL 178

Query: 101 ILGFNTFLPKGYEITLPLED 120
           I+GFNTFLP GY+I +   D
Sbjct: 179 IMGFNTFLPPGYKIEVQTND 198



 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/88 (45%), Positives = 55/88 (62%), Gaps = 13/88 (14%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI-------------TEVY 173
           +PVEF  AIN+VNKIK RFQG   +YK+FL+IL+ Y+KE ++               EVY
Sbjct: 300 QPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGSYTPALTEQEVY 359

Query: 174 QEVEALFQDHPDLLEEFTHFLPDSSGAA 201
            +V  LF++  DLL EF  FLPD++ + 
Sbjct: 360 AQVARLFKNQEDLLSEFGQFLPDANSSV 387



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 39/58 (67%), Gaps = 2/58 (3%)

Query: 355 FCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLA 410
           F +KV+  LR  + Y+ FLRCL ++ +E+I+R+EL  LV   LG++P+L + F  FL 
Sbjct: 467 FFDKVRKALRSAEAYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPELFNWFKNFLG 524



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 9/81 (11%)

Query: 124 PPKKPVE---------FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQ 174
           PP  PV+          E+A+++++++K +F     VY  FLDI+  ++ ++     V  
Sbjct: 107 PPVAPVQGQQQFQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVIS 166

Query: 175 EVEALFQDHPDLLEEFTHFLP 195
            V  LF+ HPDL+  F  FLP
Sbjct: 167 RVSQLFKGHPDLIMGFNTFLP 187


>gi|149036196|gb|EDL90862.1| rCG38713, isoform CRA_d [Rattus norvegicus]
          Length = 937

 Score =  196 bits (499), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 112/300 (37%), Positives = 171/300 (57%), Gaps = 11/300 (3%)

Query: 498 QELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKN 557
           +E+D ++C+R   SYR LPK Y  P  S RT +  EVLND WVS  S SED +F   +K 
Sbjct: 412 REIDYASCKRIGSSYRALPKTYQQPKCSGRTAICKEVLNDTWVSFPSWSEDSTFVSSKKT 471

Query: 558 QYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TA 613
            YEE L RCED+RFELD++LE+   T + +E + +K++    +    +R++D        
Sbjct: 472 PYEEQLHRCEDERFELDVVLETNLATIRVLESVQKKLSRMAPEDQEKLRLDDCLGGTSEV 531

Query: 614 LNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSK 673
           +  R I R+YGD   +V++ L++N + A+PV+L RLK K+EEW   +  FNK+W E Y K
Sbjct: 532 IQRRAIHRIYGDKAPEVIESLKRNPATAVPVVLKRLKAKEEEWREAQQGFNKIWREQYEK 591

Query: 674 NYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLE 733
            Y KSLDH++  FKQ D+K+L +K+L  EI+ + ++ +++          +  S  PHL 
Sbjct: 592 AYLKSLDHQAVNFKQNDTKALRSKSLLNEIESVYDEHQEQHS-----EGRSAPSSEPHLI 646

Query: 734 FEYSDPDIHEDLYQLIKYSCGEMCTTEQLDK--VMKIWTTFLEPMLGVPSRPQGAEDTED 791
           F Y D  I ED   LI Y        ++ D+  + ++   FL  +     RP  ++D+ D
Sbjct: 647 FVYEDRQILEDAAALISYYVKRQPAIQKEDQGTIRQLLHRFLPSLFFSQQRPATSDDSAD 706



 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 81/198 (40%), Positives = 100/198 (50%), Gaps = 44/198 (22%)

Query: 44  TTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILG 103
              DAL YL  VK  F      Y+ FLE+MK+FK+Q IDT GVI RV +LF  H DLI+G
Sbjct: 68  AVEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRVSQLFHEHPDLIVG 127

Query: 104 FNTFLPKGYEITLPL--------------------------------ED--EQPPPKKPV 129
           FN FLP GY I +P                                 ED  + P     V
Sbjct: 128 FNAFLPLGYRIDIPKNGKLNIQSPLSNQDNSHSHGDCGEDFKQMSYKEDRGQVPLESDSV 187

Query: 130 EFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKEN----------KSITEVYQEVEAL 179
           EF  AI++VNKIKTRF     +Y+SFL+IL+ Y+KE            S  EV+ EV  L
Sbjct: 188 EFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLHTKGRPFRGMSEEEVFTEVANL 247

Query: 180 FQDHPDLLEEFTHFLPDS 197
           F+   DLL EF  FLP++
Sbjct: 248 FRGQEDLLSEFGQFLPEA 265



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 5/79 (6%)

Query: 351 QELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGF 408
           QE SF +KV+  L+    Y+ FLRC+ L+ +E+++ SEL  LV   LG++P+L   F  F
Sbjct: 331 QEFSFFDKVRRVLKSQEVYENFLRCIALFNQELVSGSELLQLVSPFLGKFPELFAQFKSF 390

Query: 409 LARCEKSEELLADVMSKKS 427
           L   E S    A  MS +S
Sbjct: 391 LGVKELS---FAPPMSDRS 406


>gi|149036195|gb|EDL90861.1| rCG38713, isoform CRA_c [Rattus norvegicus]
          Length = 902

 Score =  196 bits (499), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 112/300 (37%), Positives = 171/300 (57%), Gaps = 11/300 (3%)

Query: 498 QELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKN 557
           +E+D ++C+R   SYR LPK Y  P  S RT +  EVLND WVS  S SED +F   +K 
Sbjct: 377 REIDYASCKRIGSSYRALPKTYQQPKCSGRTAICKEVLNDTWVSFPSWSEDSTFVSSKKT 436

Query: 558 QYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TA 613
            YEE L RCED+RFELD++LE+   T + +E + +K++    +    +R++D        
Sbjct: 437 PYEEQLHRCEDERFELDVVLETNLATIRVLESVQKKLSRMAPEDQEKLRLDDCLGGTSEV 496

Query: 614 LNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSK 673
           +  R I R+YGD   +V++ L++N + A+PV+L RLK K+EEW   +  FNK+W E Y K
Sbjct: 497 IQRRAIHRIYGDKAPEVIESLKRNPATAVPVVLKRLKAKEEEWREAQQGFNKIWREQYEK 556

Query: 674 NYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLE 733
            Y KSLDH++  FKQ D+K+L +K+L  EI+ + ++ +++          +  S  PHL 
Sbjct: 557 AYLKSLDHQAVNFKQNDTKALRSKSLLNEIESVYDEHQEQHS-----EGRSAPSSEPHLI 611

Query: 734 FEYSDPDIHEDLYQLIKYSCGEMCTTEQLDK--VMKIWTTFLEPMLGVPSRPQGAEDTED 791
           F Y D  I ED   LI Y        ++ D+  + ++   FL  +     RP  ++D+ D
Sbjct: 612 FVYEDRQILEDAAALISYYVKRQPAIQKEDQGTIRQLLHRFLPSLFFSQQRPATSDDSAD 671



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 87/211 (41%), Positives = 108/211 (51%), Gaps = 46/211 (21%)

Query: 33  GGGGGGGAQKLTTN--DALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARV 90
           G  G GG +KL  +  DAL YL  VK  F      Y+ FLE+MK+FK+Q IDT GVI RV
Sbjct: 20  GRSGSGGHEKLPVHVEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRV 79

Query: 91  KELFKGHRDLILGFNTFLPKGYEITLPL-------------------------------- 118
            +LF  H DLI+GFN FLP GY I +P                                 
Sbjct: 80  SQLFHEHPDLIVGFNAFLPLGYRIDIPKNGKLNIQSPLSNQDNSHSHGDCGEDFKQMSYK 139

Query: 119 ED--EQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKEN---------- 166
           ED  + P     VEF  AI++VNKIKTRF     +Y+SFL+IL+ Y+KE           
Sbjct: 140 EDRGQVPLESDSVEFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLHTKGRPFRG 199

Query: 167 KSITEVYQEVEALFQDHPDLLEEFTHFLPDS 197
            S  EV+ EV  LF+   DLL EF  FLP++
Sbjct: 200 MSEEEVFTEVANLFRGQEDLLSEFGQFLPEA 230



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 5/79 (6%)

Query: 351 QELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGF 408
           QE SF +KV+  L+    Y+ FLRC+ L+ +E+++ SEL  LV   LG++P+L   F  F
Sbjct: 296 QEFSFFDKVRRVLKSQEVYENFLRCIALFNQELVSGSELLQLVSPFLGKFPELFAQFKSF 355

Query: 409 LARCEKSEELLADVMSKKS 427
           L   E S    A  MS +S
Sbjct: 356 LGVKELS---FAPPMSDRS 371


>gi|149036198|gb|EDL90864.1| rCG38713, isoform CRA_f [Rattus norvegicus]
          Length = 841

 Score =  196 bits (499), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 112/300 (37%), Positives = 171/300 (57%), Gaps = 11/300 (3%)

Query: 498 QELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKN 557
           +E+D ++C+R   SYR LPK Y  P  S RT +  EVLND WVS  S SED +F   +K 
Sbjct: 316 REIDYASCKRIGSSYRALPKTYQQPKCSGRTAICKEVLNDTWVSFPSWSEDSTFVSSKKT 375

Query: 558 QYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TA 613
            YEE L RCED+RFELD++LE+   T + +E + +K++    +    +R++D        
Sbjct: 376 PYEEQLHRCEDERFELDVVLETNLATIRVLESVQKKLSRMAPEDQEKLRLDDCLGGTSEV 435

Query: 614 LNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSK 673
           +  R I R+YGD   +V++ L++N + A+PV+L RLK K+EEW   +  FNK+W E Y K
Sbjct: 436 IQRRAIHRIYGDKAPEVIESLKRNPATAVPVVLKRLKAKEEEWREAQQGFNKIWREQYEK 495

Query: 674 NYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLE 733
            Y KSLDH++  FKQ D+K+L +K+L  EI+ + ++ +++          +  S  PHL 
Sbjct: 496 AYLKSLDHQAVNFKQNDTKALRSKSLLNEIESVYDEHQEQHS-----EGRSAPSSEPHLI 550

Query: 734 FEYSDPDIHEDLYQLIKYSCGEMCTTEQLDK--VMKIWTTFLEPMLGVPSRPQGAEDTED 791
           F Y D  I ED   LI Y        ++ D+  + ++   FL  +     RP  ++D+ D
Sbjct: 551 FVYEDRQILEDAAALISYYVKRQPAIQKEDQGTIRQLLHRFLPSLFFSQQRPATSDDSAD 610



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 69/169 (40%), Positives = 86/169 (50%), Gaps = 44/169 (26%)

Query: 73  MKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPL-------------- 118
           MK+FK+Q IDT GVI RV +LF  H DLI+GFN FLP GY I +P               
Sbjct: 1   MKEFKSQSIDTPGVIRRVSQLFHEHPDLIVGFNAFLPLGYRIDIPKNGKLNIQSPLSNQD 60

Query: 119 ------------------ED--EQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDI 158
                             ED  + P     VEF  AI++VNKIKTRF     +Y+SFL+I
Sbjct: 61  NSHSHGDCGEDFKQMSYKEDRGQVPLESDSVEFNNAISYVNKIKTRFLDHPEIYRSFLEI 120

Query: 159 LNMYRKEN----------KSITEVYQEVEALFQDHPDLLEEFTHFLPDS 197
           L+ Y+KE            S  EV+ EV  LF+   DLL EF  FLP++
Sbjct: 121 LHTYQKEQLHTKGRPFRGMSEEEVFTEVANLFRGQEDLLSEFGQFLPEA 169



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 5/79 (6%)

Query: 351 QELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGF 408
           QE SF +KV+  L+    Y+ FLRC+ L+ +E+++ SEL  LV   LG++P+L   F  F
Sbjct: 235 QEFSFFDKVRRVLKSQEVYENFLRCIALFNQELVSGSELLQLVSPFLGKFPELFAQFKSF 294

Query: 409 LARCEKSEELLADVMSKKS 427
           L   E S    A  MS +S
Sbjct: 295 LGVKELS---FAPPMSDRS 310



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/216 (23%), Positives = 84/216 (38%), Gaps = 59/216 (27%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAG----------VIARVKELFK 95
           N+A++Y+  +K  F D  E Y  FLE++  ++ +++ T G          V   V  LF+
Sbjct: 94  NNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLHTKGRPFRGMSEEEVFTEVANLFR 153

Query: 96  GHRDLILGFNTFLP-------------------KGYEITLP---------LEDEQPPPKK 127
           G  DL+  F  FLP                   K  E +L          L     P KK
Sbjct: 154 GQEDLLSEFGQFLPEAKRSLFTGNGSCEMNSAQKNEEKSLEHKKRSRPSLLRPVSAPAKK 213

Query: 128 PVEFE----------------EAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITE 171
            ++                  +  +F +K++ R      VY++FL  + ++ +E  S +E
Sbjct: 214 KMKLRGTKDLSIAAVGKYGTLQEFSFFDKVR-RVLKSQEVYENFLRCIALFNQELVSGSE 272

Query: 172 VYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVP 207
           + Q V       P+L  +F  FL    G   + + P
Sbjct: 273 LLQLVSPFLGKFPELFAQFKSFL----GVKELSFAP 304


>gi|432860384|ref|XP_004069528.1| PREDICTED: paired amphipathic helix protein Sin3a-like [Oryzias
           latipes]
          Length = 1274

 Score =  196 bits (498), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 112/286 (39%), Positives = 170/286 (59%), Gaps = 13/286 (4%)

Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQ 558
           E+D ++C+R   SYR LPK+Y  P  + RT L  EVLND WVS  S SED +F   +K Q
Sbjct: 549 EIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVSSKKTQ 608

Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLE-KINNNTIKTDGPIRVEDHF----TA 613
           YEE ++RCED+RFELD++LE+ N+ T RV E ++ K++  + +     R+++        
Sbjct: 609 YEEHIYRCEDERFELDVVLET-NLATIRVLETVQWKLSRMSAEEQAKFRLDNTLGGSSEV 667

Query: 614 LNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSK 673
           ++ + I+R+YGD   D++D L+KN ++++P++L RLK K+EEW   +  FNK+W E   K
Sbjct: 668 IHRKAIQRIYGDKAADIIDGLKKNPAVSVPIVLKRLKTKEEEWREAQRGFNKIWREQNEK 727

Query: 674 NYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLE 733
            Y KSLDH+   FKQ D+K L +K+L  EI+ I ++++++     A A        PHL 
Sbjct: 728 YYLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQATEENATAPTG-----PHLT 782

Query: 734 FEYSDPDIHEDLYQLIKYSCGEMCTTEQLD--KVMKIWTTFLEPML 777
             Y D  I ED   LI +      + ++ D  K+ +I   FL  ML
Sbjct: 783 LTYEDSQILEDAAALIIHHVKRQTSIQKEDKYKIKQIIYHFLPDML 828



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 58/124 (46%), Positives = 76/124 (61%), Gaps = 16/124 (12%)

Query: 8   VYMNSQIKRPMISSRGEPSGQTQVVGGGGGGGA-----------QKLTTNDALAYLKAVK 56
           V+  S    P + S G PS    V+ G G  GA           Q+L   DAL+YL  VK
Sbjct: 81  VHAGSHHHSPAVQSHG-PS----VMPGHGHTGAPQGSAQGHQQFQRLKVEDALSYLDQVK 135

Query: 57  DIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITL 116
             F ++ + Y+DFL++MK+FK+Q IDT GVI+RV +LFKGH DLI+GFNTFLP GY+I +
Sbjct: 136 LQFGNQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIMGFNTFLPPGYKIEV 195

Query: 117 PLED 120
              D
Sbjct: 196 QTND 199



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 47/131 (35%), Positives = 75/131 (57%), Gaps = 20/131 (15%)

Query: 117 PLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI------- 169
           PL++ QP     VEF  AIN+VNKIK RFQG   +YK+FL+IL+ Y+KE ++        
Sbjct: 299 PLQNNQP-----VEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNY 353

Query: 170 ------TEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPT 223
                  EVY +V  LF++  DLL EF  FLPD++ +  ++   + +   +R+      T
Sbjct: 354 TPALTEQEVYAQVARLFKNQEDLLSEFGQFLPDANSSVLLNKTTAEKAESVRNDHGF--T 411

Query: 224 ARQVHVDKKER 234
            +++ ++ K+R
Sbjct: 412 TKKLQLNNKQR 422



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/63 (44%), Positives = 40/63 (63%), Gaps = 2/63 (3%)

Query: 355 FCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLARC 412
           F EKV+  LR  + Y  FLRCL ++ +E+I+R+EL  LV   LG++P+L + F  FL   
Sbjct: 470 FFEKVRKALRSAEAYDNFLRCLVIFNQEVISRAELVQLVLPFLGKFPELFNWFKNFLGYR 529

Query: 413 EKS 415
           E S
Sbjct: 530 EMS 532



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 40/67 (59%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           ++ E+A+++++++K +F     VY  FLDI+  ++ ++     V   V  LF+ HPDL+ 
Sbjct: 122 LKVEDALSYLDQVKLQFGNQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIM 181

Query: 189 EFTHFLP 195
            F  FLP
Sbjct: 182 GFNTFLP 188


>gi|91980275|gb|AAA69773.2| Sin3A [Mus musculus]
          Length = 1207

 Score =  196 bits (498), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 108/285 (37%), Positives = 166/285 (58%), Gaps = 11/285 (3%)

Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQ 558
           E+D ++C+R   SYR LPK+Y  P  + RT L  EVLND WVS  S SED +F   +K Q
Sbjct: 546 EIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVSSKKTQ 605

Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TAL 614
           YEE ++RCED+RFELD++LE+   T + +E + +K++  + +     R+++        +
Sbjct: 606 YEEHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSAEEQAKFRLDNTLGGTSEVI 665

Query: 615 NLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKN 674
           + + ++R+Y D   D++D LRKN S+A+P++L RLK K+EEW   +  FNKVW E   K 
Sbjct: 666 HRKALQRIYADKAADIIDGLRKNPSIAVPIVLKRLKMKEEEWREAQRGFNKVWREQNEKY 725

Query: 675 YHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEF 734
           Y KSLDH+   FKQ D+K L +K+L  EI+ I ++++++     A        + PHL  
Sbjct: 726 YLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQ-----ATEENAGVPVGPHLSL 780

Query: 735 EYSDPDIHEDLYQLIKYSCGEMCTTEQLD--KVMKIWTTFLEPML 777
            Y D  I ED   LI +        ++ D  K+ +I   F+  +L
Sbjct: 781 AYEDKQILEDAAALIIHHVKRQTGIQKEDKYKIKQIMHHFIPDLL 825



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 50/103 (48%), Positives = 67/103 (65%), Gaps = 2/103 (1%)

Query: 18  MISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFK 77
           ++ S   P+     V G      Q+L   DAL+YL  VK  F  + + Y+DFL++MK+FK
Sbjct: 98  VVQSHAHPAPPVAPVQGQQQ--FQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFK 155

Query: 78  AQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLED 120
           +Q IDT GVI+RV +LFKGH DLI+GFNTFLP GY+I +   D
Sbjct: 156 SQSIDTPGVISRVSQLFKGHPDLIMGFNTFLPPGYKIEVQTND 198



 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/88 (45%), Positives = 55/88 (62%), Gaps = 13/88 (14%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI-------------TEVY 173
           +PVEF  AIN+VNKIK RFQG   +YK+FL+IL+ Y+KE ++               EVY
Sbjct: 300 QPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVY 359

Query: 174 QEVEALFQDHPDLLEEFTHFLPDSSGAA 201
            +V  LF++  DLL EF  FLPD++ + 
Sbjct: 360 AQVARLFKNQEDLLSEFGQFLPDANSSV 387



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 2/73 (2%)

Query: 343 NAMKSMFSQELSFCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPD 400
           +A K     E  F +KV+  LR  + Y+ FLRCL ++ +E+I+R+EL  LV   LG++P+
Sbjct: 455 DASKHGVGTESLFFDKVRKALRSAEAYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPE 514

Query: 401 LMDGFNGFLARCE 413
           L + F  FL   E
Sbjct: 515 LFNWFKNFLGYKE 527



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 9/81 (11%)

Query: 124 PPKKPVE---------FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQ 174
           PP  PV+          E+A+++++++K +F     VY  FLDI+  ++ ++     V  
Sbjct: 107 PPVAPVQGQQQFQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVIS 166

Query: 175 EVEALFQDHPDLLEEFTHFLP 195
            V  LF+ HPDL+  F  FLP
Sbjct: 167 RVSQLFKGHPDLIMGFNTFLP 187


>gi|414877958|tpg|DAA55089.1| TPA: hypothetical protein ZEAMMB73_922770 [Zea mays]
          Length = 250

 Score =  196 bits (498), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 95/155 (61%), Positives = 118/155 (76%), Gaps = 3/155 (1%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
           LT  DALAY+KAVKD FQ+KR  Y+ FL+VM+DFK+ R+D+AG+IARVK LF G+ DL+L
Sbjct: 25  LTARDALAYIKAVKDNFQEKRHTYEQFLQVMRDFKSNRLDSAGLIARVKTLFHGYPDLVL 84

Query: 103 GFNTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMY 162
           G N FLPKG+ I      +    K+PV++  AIN VN+IK RFQ ++HVYKSFL IL+MY
Sbjct: 85  GINAFLPKGHAIR---PQDLSEDKEPVDYPRAINLVNRIKIRFQQEEHVYKSFLGILSMY 141

Query: 163 RKENKSITEVYQEVEALFQDHPDLLEEFTHFLPDS 197
           R +NK I +VY EV  LF  HPDLLEEFTHFLPD+
Sbjct: 142 RMDNKPIQDVYDEVTLLFHGHPDLLEEFTHFLPDT 176


>gi|417406280|gb|JAA49804.1| Putative histone deacetylase complex [Desmodus rotundus]
          Length = 1275

 Score =  196 bits (497), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 110/286 (38%), Positives = 166/286 (58%), Gaps = 13/286 (4%)

Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQ 558
           E+D ++C+R   SYR LPK+Y  P  + RT L  EVLND WVS  S SED +F   +K Q
Sbjct: 547 EIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVSSKKTQ 606

Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TAL 614
           YEE ++RCED+RFELD++LE+   T + +E + +K++  + +     R+++        +
Sbjct: 607 YEEHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSAEEQAKFRLDNTLGGTSEVI 666

Query: 615 NLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKN 674
           + + ++R+Y D   D++D LRKN S+A+P++L RLK K+EEW   +  FNKVW E   K 
Sbjct: 667 HRKALQRIYADKAADIIDGLRKNPSIAVPIVLKRLKMKEEEWREAQRGFNKVWREQNEKY 726

Query: 675 YHKSLDHRSFYFKQQDSKSLGAKALSAEIKEI-SEKKRKEDDVLLAIAAGNRRSIVPHLE 733
           Y KSLDH+   FKQ D+K L +K+L  EI+ I  E++ +  +    + AG      PHL 
Sbjct: 727 YLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQATEENAGVPAG------PHLS 780

Query: 734 FEYSDPDIHEDLYQLIKYSCGEMCTTEQLD--KVMKIWTTFLEPML 777
             Y D  I ED   LI +        ++ D  K+ +I   F+  +L
Sbjct: 781 LAYEDKQILEDAAALIIHHVKRQAGIQKEDKYKIKQIMYHFIPDLL 826



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 46/80 (57%), Positives = 60/80 (75%)

Query: 41  QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDL 100
           Q+L   DAL+YL  VK  F  + + Y+DFL++MK+FK+Q IDT GVI+RV +LFKGH DL
Sbjct: 120 QRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDL 179

Query: 101 ILGFNTFLPKGYEITLPLED 120
           I+GFNTFLP GY+I +   D
Sbjct: 180 IMGFNTFLPPGYKIEVQTND 199



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/88 (45%), Positives = 55/88 (62%), Gaps = 13/88 (14%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI-------------TEVY 173
           +PVEF  AIN+VNKIK RFQG   +YK+FL+IL+ Y+KE ++               EVY
Sbjct: 301 QPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVY 360

Query: 174 QEVEALFQDHPDLLEEFTHFLPDSSGAA 201
            +V  LF++  DLL EF  FLPD++ + 
Sbjct: 361 AQVARLFKNQEDLLSEFGQFLPDANSSV 388



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/70 (40%), Positives = 43/70 (61%), Gaps = 2/70 (2%)

Query: 343 NAMKSMFSQELSFCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPD 400
           +A K     E  F +KV+  LR  + Y+ FLRCL ++ +E+I+R+EL  LV   LG++P+
Sbjct: 456 DASKHGVGTESLFFDKVRKALRSAEAYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPE 515

Query: 401 LMDGFNGFLA 410
           L + F  FL 
Sbjct: 516 LFNWFKNFLG 525



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 9/81 (11%)

Query: 124 PPKKPVE---------FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQ 174
           PP  PV+          E+A+++++++K +F     VY  FLDI+  ++ ++     V  
Sbjct: 108 PPVAPVQGQQQFQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVIS 167

Query: 175 EVEALFQDHPDLLEEFTHFLP 195
            V  LF+ HPDL+  F  FLP
Sbjct: 168 RVSQLFKGHPDLIMGFNTFLP 188


>gi|113678676|ref|NP_001038410.1| paired amphipathic helix protein Sin3b [Danio rerio]
 gi|213625867|gb|AAI71498.1| SIN3 homolog B, transcription regulator (yeast) [Danio rerio]
 gi|213627518|gb|AAI71496.1| SIN3 homolog B, transcription regulator (yeast) [Danio rerio]
          Length = 1196

 Score =  196 bits (497), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 146/502 (29%), Positives = 231/502 (46%), Gaps = 86/502 (17%)

Query: 349 FSQELSFCEKVKDKLRDD---YQEFLRCLHLYTKEII-------------TRSELQSLVG 392
           F   +S+  K+K++  D+   Y+ FL  LH Y KE +             T  E+ S V 
Sbjct: 206 FDSAISYVNKIKNRFLDNPETYRAFLEILHTYQKEQLEVKESRGRSTGGMTEDEVFSKVA 265

Query: 393 DLLGRYPDLMDGFNGFLARCEKS--------------EEL---------------LADVM 423
            L     DL+  F  FL   ++S              EEL               +  ++
Sbjct: 266 SLFKGQEDLLAEFGQFLPDAKRSLFTGGSLPLKKVEEEELNKQTKKRPRPMLLPHMTPLL 325

Query: 424 SKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRLDKSVAFVNKDV---- 479
            KK  ++  + P    V      R+    D V+   +     +   + +A  N++V    
Sbjct: 326 KKKMKYSCSKDPSFASVGKHGVLREFTFFDKVRRLLKSQEVYENFLRCIALFNQEVVSGA 385

Query: 480 ----------GPKMSMYSS-----------------KDKYLAKPIQELDLSNCERCTPSY 512
                     G    +Y+                   D+Y+    +E+D ++C+R   SY
Sbjct: 386 ELLQLVTPFLGKFPELYTQFKSFLGDKELSHVISGLSDRYMEGGGREVDYASCKRLGSSY 445

Query: 513 RLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFE 572
           R LPK Y  P  S RT +  EVLND WVS  S SED +F   +K  YEE L RCED+RFE
Sbjct: 446 RALPKTYQQPKCSGRTAICKEVLNDTWVSFPSWSEDSTFVSSKKTPYEEQLHRCEDERFE 505

Query: 573 LDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TALNLRCIERLYGDHGL 628
           LD++LE+   T + +E + +K++  +++     R++D        +  R + R+YGD   
Sbjct: 506 LDVVLETNLATIRVLESVQKKLSRLSLEDQERFRLDDCLGGTSEVIQRRAVYRIYGDKAP 565

Query: 629 DVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQ 688
           ++++ L+++ + A+PV+L RLK K+EEW   +  FNK+W E Y K Y KSLDH+   FKQ
Sbjct: 566 EIIEGLKRSPATAVPVVLKRLKAKEEEWREAQQGFNKIWREQYEKAYLKSLDHQGVNFKQ 625

Query: 689 QDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNR------RSIVPHLEFEYSDPDIH 742
            D K+L +K+L  EI+ I ++++++     ++    R       +  PH+ F Y D  I 
Sbjct: 626 NDMKALRSKSLLNEIESIYDERQEQSTEEGSVGQQGRDGTSTASTSEPHMIFNYEDKQIL 685

Query: 743 EDLYQLIKYSCGEMCTTEQLDK 764
           ED   LI Y      T  + DK
Sbjct: 686 EDAASLIIYHVKRQPTIHKDDK 707



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 44/77 (57%), Positives = 54/77 (70%)

Query: 41  QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDL 100
           QKL   DAL+YL  VK  F +    Y+ FL++MK+FK+Q IDT GVI RV +LF GH DL
Sbjct: 34  QKLKVEDALSYLDQVKIRFGNDPGIYNKFLDIMKEFKSQSIDTPGVINRVSQLFHGHPDL 93

Query: 101 ILGFNTFLPKGYEITLP 117
           +LGFN FLP GY I +P
Sbjct: 94  VLGFNAFLPPGYRIEIP 110



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 42/111 (37%), Positives = 61/111 (54%), Gaps = 26/111 (23%)

Query: 113 EITLPLED----EQP------PPKK---PVEFEEAINFVNKIKTRFQGDDHVYKSFLDIL 159
           +++LPL +     QP      PP     PVEF+ AI++VNKIK RF  +   Y++FL+IL
Sbjct: 175 KLSLPLPNRESQSQPAATSVSPPTSEPSPVEFDSAISYVNKIKNRFLDNPETYRAFLEIL 234

Query: 160 NMYRKENKSIT-------------EVYQEVEALFQDHPDLLEEFTHFLPDS 197
           + Y+KE   +              EV+ +V +LF+   DLL EF  FLPD+
Sbjct: 235 HTYQKEQLEVKESRGRSTGGMTEDEVFSKVASLFKGQEDLLAEFGQFLPDA 285



 Score = 56.2 bits (134), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 73/298 (24%), Positives = 114/298 (38%), Gaps = 72/298 (24%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRID--------TAG-----VIARVKE 92
           + A++Y+  +K+ F D  E Y  FLE++  ++ ++++        T G     V ++V  
Sbjct: 207 DSAISYVNKIKNRFLDNPETYRAFLEILHTYQKEQLEVKESRGRSTGGMTEDEVFSKVAS 266

Query: 93  LFKGHRDLILGFNTFLPKGYEI-----TLPL---EDEQ------------------PPPK 126
           LFKG  DL+  F  FLP          +LPL   E+E+                  P  K
Sbjct: 267 LFKGQEDLLAEFGQFLPDAKRSLFTGGSLPLKKVEEEELNKQTKKRPRPMLLPHMTPLLK 326

Query: 127 KPVEFE----------------EAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSIT 170
           K +++                     F +K++ R      VY++FL  + ++ +E  S  
Sbjct: 327 KKMKYSCSKDPSFASVGKHGVLREFTFFDKVR-RLLKSQEVYENFLRCIALFNQEVVSGA 385

Query: 171 EVYQEVEALFQDHPDLLEEFTHFLPDS------SGAASIHYVPSGRN----SILRDRSS- 219
           E+ Q V       P+L  +F  FL D       SG +  +    GR     S  R  SS 
Sbjct: 386 ELLQLVTPFLGKFPELYTQFKSFLGDKELSHVISGLSDRYMEGGGREVDYASCKRLGSSY 445

Query: 220 -AMPTARQVHVDKKERAMASHADRDLSVDRPDPDHDRVLLKSDK----DQRRRGEKER 272
            A+P   Q        A+      D  V  P    D   + S K    +Q  R E ER
Sbjct: 446 RALPKTYQQPKCSGRTAICKEVLNDTWVSFPSWSEDSTFVSSKKTPYEEQLHRCEDER 503



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 40/67 (59%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           ++ E+A+++++++K RF  D  +Y  FLDI+  ++ ++     V   V  LF  HPDL+ 
Sbjct: 36  LKVEDALSYLDQVKIRFGNDPGIYNKFLDIMKEFKSQSIDTPGVINRVSQLFHGHPDLVL 95

Query: 189 EFTHFLP 195
            F  FLP
Sbjct: 96  GFNAFLP 102


>gi|91980277|gb|AAA69772.2| Sin3A9 [Mus musculus]
          Length = 1217

 Score =  196 bits (497), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 108/285 (37%), Positives = 166/285 (58%), Gaps = 11/285 (3%)

Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQ 558
           E+D ++C+R   SYR LPK+Y  P  + RT L  EVLND WVS  S SED +F   +K Q
Sbjct: 546 EIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVSSKKTQ 605

Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TAL 614
           YEE ++RCED+RFELD++LE+   T + +E + +K++  + +     R+++        +
Sbjct: 606 YEEHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSAEEQAKFRLDNTLGGTSEVI 665

Query: 615 NLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKN 674
           + + ++R+Y D   D++D LRKN S+A+P++L RLK K+EEW   +  FNKVW E   K 
Sbjct: 666 HRKALQRIYADKAADIIDGLRKNPSIAVPIVLKRLKMKEEEWREAQRGFNKVWREQNEKY 725

Query: 675 YHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEF 734
           Y KSLDH+   FKQ D+K L +K+L  EI+ I ++++++     A        + PHL  
Sbjct: 726 YLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQ-----ATEENAGVPVGPHLSL 780

Query: 735 EYSDPDIHEDLYQLIKYSCGEMCTTEQLD--KVMKIWTTFLEPML 777
            Y D  I ED   LI +        ++ D  K+ +I   F+  +L
Sbjct: 781 AYEDKQILEDAAALIIHHVKRQTGIQKEDKYKIKQIMHHFIPDLL 825



 Score =  102 bits (253), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 50/103 (48%), Positives = 67/103 (65%), Gaps = 2/103 (1%)

Query: 18  MISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFK 77
           ++ S   P+     V G      Q+L   DAL+YL  VK  F  + + Y+DFL++MK+FK
Sbjct: 98  VVQSHAHPAPPVAPVQGQQQ--FQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFK 155

Query: 78  AQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLED 120
           +Q IDT GVI+RV +LFKGH DLI+GFNTFLP GY+I +   D
Sbjct: 156 SQSIDTPGVISRVSQLFKGHPDLIMGFNTFLPPGYKIEVQTND 198



 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/88 (45%), Positives = 55/88 (62%), Gaps = 13/88 (14%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI-------------TEVY 173
           +PVEF  AIN+VNKIK RFQG   +YK+FL+IL+ Y+KE ++               EVY
Sbjct: 300 QPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVY 359

Query: 174 QEVEALFQDHPDLLEEFTHFLPDSSGAA 201
            +V  LF++  DLL EF  FLPD++ + 
Sbjct: 360 AQVARLFKNQEDLLSEFGQFLPDANSSV 387



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 2/73 (2%)

Query: 343 NAMKSMFSQELSFCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPD 400
           +A K     E  F +KV+  LR  + Y+ FLRCL ++ +E+I+R+EL  LV   LG++P+
Sbjct: 455 DASKHGVGTESLFFDKVRKALRSAEAYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPE 514

Query: 401 LMDGFNGFLARCE 413
           L + F  FL   E
Sbjct: 515 LFNWFKNFLGYKE 527



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 9/81 (11%)

Query: 124 PPKKPVE---------FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQ 174
           PP  PV+          E+A+++++++K +F     VY  FLDI+  ++ ++     V  
Sbjct: 107 PPVAPVQGQQQFQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVIS 166

Query: 175 EVEALFQDHPDLLEEFTHFLP 195
            V  LF+ HPDL+  F  FLP
Sbjct: 167 RVSQLFKGHPDLIMGFNTFLP 187


>gi|354473806|ref|XP_003499123.1| PREDICTED: paired amphipathic helix protein Sin3b isoform 2
           [Cricetulus griseus]
          Length = 1090

 Score =  196 bits (497), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 112/300 (37%), Positives = 171/300 (57%), Gaps = 11/300 (3%)

Query: 498 QELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKN 557
           +E+D ++C+R   SYR LPK Y  P  S RT +  EVLND WVS  S SED +F   +K 
Sbjct: 378 REIDYASCKRIGSSYRALPKTYQQPKCSGRTAICKEVLNDTWVSFPSWSEDSTFVSSKKT 437

Query: 558 QYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TA 613
            YEE L RCED+RFELD++LE+   T + +E + +K++    +    +R++D        
Sbjct: 438 PYEEQLHRCEDERFELDVVLETNLATIRVLESVQKKLSRMAPEDQEKLRLDDCLGGTSEV 497

Query: 614 LNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSK 673
           +  R I R+YGD   +V++ L++N + A+PV+L RLK K+EEW   +  FNK+W E Y K
Sbjct: 498 IQRRAIHRIYGDKAPEVIESLKRNPATAVPVVLKRLKAKEEEWREAQQGFNKIWREQYEK 557

Query: 674 NYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLE 733
            Y KSLDH++  FKQ D+K+L +K+L  EI+ + ++ +++          +  S  PHL 
Sbjct: 558 AYLKSLDHQAVNFKQNDTKALRSKSLLNEIESVYDEHQEQHS-----EGRSAPSSEPHLI 612

Query: 734 FEYSDPDIHEDLYQLIKYSCGEMCTTEQLDK--VMKIWTTFLEPMLGVPSRPQGAEDTED 791
           F Y D  I ED   LI Y        ++ D+  + ++   FL  +     RP  ++D+ D
Sbjct: 613 FVYEDRQILEDAAALISYYVKRQPAIQKEDQGTIRQLLHRFLPSLFFSQQRPGASDDSTD 672



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 97/268 (36%), Positives = 131/268 (48%), Gaps = 54/268 (20%)

Query: 33  GGGGGGGAQKLTTN--DALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARV 90
           G  G GG +KL  +  DAL YL  VK  F      Y+ FLE+MK+FK+Q IDT GVI RV
Sbjct: 20  GRSGSGGHEKLPVHVEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRV 79

Query: 91  KELFKGHRDLILGFNTFLPKGYEITLPL-------------------------------- 118
            +LF  H DLI+GFN FLP GY I +P                                 
Sbjct: 80  SQLFHEHPDLIVGFNAFLPLGYRIDIPKNGKLNIQSPLASQENSHSHGDCGEDFKQMSYK 139

Query: 119 ED--EQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKEN---------- 166
           ED  + P     VEF  AI++VNKIKTRF     +Y+SFL+IL+ Y+KE           
Sbjct: 140 EDRGQVPLESDSVEFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLHTKGRPFRG 199

Query: 167 KSITEVYQEVEALFQDHPDLLEEFTHFLPDS-------SGAASIHYV-PSGRNSILRDRS 218
            S  EV+ EV  LF+   DLL EF  FLP++       SG+  ++ V  S   S+  ++ 
Sbjct: 200 MSEEEVFTEVANLFRGQEDLLSEFGQFLPEAKRSLFTGSGSCEMNSVQKSEEKSLEHNKK 259

Query: 219 SAMPTARQVHVDKKERAMASHADRDLSV 246
            + P+  +      ++ M     +DLS+
Sbjct: 260 RSRPSLLRPVSAPAKKKMKLRGTKDLSI 287



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 5/79 (6%)

Query: 351 QELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGF 408
           QE SF +KV+  L+    Y+ FLRC+ L+ +E+++ SEL  LV   LG++P+L   F  F
Sbjct: 297 QEFSFFDKVRRVLKSQEVYENFLRCIALFNQELVSGSELLQLVSPFLGKFPELFAQFKSF 356

Query: 409 LARCEKSEELLADVMSKKS 427
           L   E S    A  MS +S
Sbjct: 357 LGVKELS---FAPPMSDRS 372


>gi|31807190|gb|AAH53385.1| Sin3a protein, partial [Mus musculus]
          Length = 1161

 Score =  196 bits (497), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 108/285 (37%), Positives = 166/285 (58%), Gaps = 11/285 (3%)

Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQ 558
           E+D ++C+R   SYR LPK+Y  P  + RT L  EVLND WVS  S SED +F   +K Q
Sbjct: 546 EIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVSSKKTQ 605

Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TAL 614
           YEE ++RCED+RFELD++LE+   T + +E + +K++  + +     R+++        +
Sbjct: 606 YEEHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSAEEQAKFRLDNTLGGTSEVI 665

Query: 615 NLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKN 674
           + + ++R+Y D   D++D LRKN S+A+P++L RLK K+EEW   +  FNKVW E   K 
Sbjct: 666 HRKALQRIYADKAADIIDGLRKNPSIAVPIVLKRLKMKEEEWREAQRGFNKVWREQNEKY 725

Query: 675 YHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEF 734
           Y KSLDH+   FKQ D+K L +K+L  EI+ I ++++++     A        + PHL  
Sbjct: 726 YLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQ-----ATEENAGVPVGPHLSL 780

Query: 735 EYSDPDIHEDLYQLIKYSCGEMCTTEQLD--KVMKIWTTFLEPML 777
            Y D  I ED   LI +        ++ D  K+ +I   F+  +L
Sbjct: 781 AYEDKQILEDAAALIIHHVKRQTGIQKEDKYKIKQIMHHFIPDLL 825



 Score = 99.4 bits (246), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 49/103 (47%), Positives = 66/103 (64%), Gaps = 2/103 (1%)

Query: 18  MISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFK 77
           ++ S   P+     V G      Q+L   DAL+YL  VK  F  + + Y+DFL++MK+ K
Sbjct: 98  VVQSHAHPAPPVAPVQGQQQ--FQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKELK 155

Query: 78  AQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLED 120
           +Q IDT GVI+RV +LFKGH DLI+GFNTFLP GY+I +   D
Sbjct: 156 SQSIDTPGVISRVSQLFKGHPDLIMGFNTFLPPGYKIEVQTND 198



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/88 (45%), Positives = 55/88 (62%), Gaps = 13/88 (14%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI-------------TEVY 173
           +PVEF  AIN+VNKIK RFQG   +YK+FL+IL+ Y+KE ++               EVY
Sbjct: 300 QPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVY 359

Query: 174 QEVEALFQDHPDLLEEFTHFLPDSSGAA 201
            +V  LF++  DLL EF  FLPD++ + 
Sbjct: 360 AQVARLFKNQEDLLSEFGQFLPDANSSV 387



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 43/73 (58%), Gaps = 2/73 (2%)

Query: 343 NAMKSMFSQELSFCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPD 400
           +A K     E  F +KV+  LR  + Y+ FLRCL ++ +E+I+R+EL  LV   LG++P 
Sbjct: 455 DASKHGVGTESLFFDKVRKALRSAEAYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPG 514

Query: 401 LMDGFNGFLARCE 413
           L + F  FL   E
Sbjct: 515 LFNWFKNFLGYKE 527



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 9/81 (11%)

Query: 124 PPKKPVE---------FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQ 174
           PP  PV+          E+A+++++++K +F     VY  FLDI+   + ++     V  
Sbjct: 107 PPVAPVQGQQQFQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKELKSQSIDTPGVIS 166

Query: 175 EVEALFQDHPDLLEEFTHFLP 195
            V  LF+ HPDL+  F  FLP
Sbjct: 167 RVSQLFKGHPDLIMGFNTFLP 187


>gi|148693938|gb|EDL25885.1| transcriptional regulator, SIN3A (yeast), isoform CRA_c [Mus
           musculus]
          Length = 1181

 Score =  196 bits (497), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 108/285 (37%), Positives = 166/285 (58%), Gaps = 11/285 (3%)

Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQ 558
           E+D ++C+R   SYR LPK+Y  P  + RT L  EVLND WVS  S SED +F   +K Q
Sbjct: 554 EIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVSSKKTQ 613

Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TAL 614
           YEE ++RCED+RFELD++LE+   T + +E + +K++  + +     R+++        +
Sbjct: 614 YEEHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSAEEQAKFRLDNTLGGTSEVI 673

Query: 615 NLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKN 674
           + + ++R+Y D   D++D LRKN S+A+P++L RLK K+EEW   +  FNKVW E   K 
Sbjct: 674 HRKALQRIYADKAADIIDGLRKNPSIAVPIVLKRLKMKEEEWREAQRGFNKVWREQNEKY 733

Query: 675 YHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEF 734
           Y KSLDH+   FKQ D+K L +K+L  EI+ I ++++++     A        + PHL  
Sbjct: 734 YLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQ-----ATEENAGVPVGPHLSL 788

Query: 735 EYSDPDIHEDLYQLIKYSCGEMCTTEQLD--KVMKIWTTFLEPML 777
            Y D  I ED   LI +        ++ D  K+ +I   F+  +L
Sbjct: 789 AYEDKQILEDAAALIIHHVKRQTGIQKEDKYKIKQIMHHFIPDLL 833



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 50/103 (48%), Positives = 67/103 (65%), Gaps = 2/103 (1%)

Query: 18  MISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFK 77
           ++ S   P+     V G      Q+L   DAL+YL  VK  F  + + Y+DFL++MK+FK
Sbjct: 106 VVQSHAHPAPPVAPVQGQQQ--FQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFK 163

Query: 78  AQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLED 120
           +Q IDT GVI+RV +LFKGH DLI+GFNTFLP GY+I +   D
Sbjct: 164 SQSIDTPGVISRVSQLFKGHPDLIMGFNTFLPPGYKIEVQTND 206



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/88 (45%), Positives = 55/88 (62%), Gaps = 13/88 (14%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI-------------TEVY 173
           +PVEF  AIN+VNKIK RFQG   +YK+FL+IL+ Y+KE ++               EVY
Sbjct: 308 QPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVY 367

Query: 174 QEVEALFQDHPDLLEEFTHFLPDSSGAA 201
            +V  LF++  DLL EF  FLPD++ + 
Sbjct: 368 AQVARLFKNQEDLLSEFGQFLPDANSSV 395



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/70 (40%), Positives = 43/70 (61%), Gaps = 2/70 (2%)

Query: 343 NAMKSMFSQELSFCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPD 400
           +A K     E  F +KV+  LR  + Y+ FLRCL ++ +E+I+R+EL  LV   LG++P+
Sbjct: 463 DASKHGVGTESLFFDKVRKALRSAEAYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPE 522

Query: 401 LMDGFNGFLA 410
           L + F  FL 
Sbjct: 523 LFNWFKNFLG 532



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 9/81 (11%)

Query: 124 PPKKPVE---------FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQ 174
           PP  PV+          E+A+++++++K +F     VY  FLDI+  ++ ++     V  
Sbjct: 115 PPVAPVQGQQQFQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVIS 174

Query: 175 EVEALFQDHPDLLEEFTHFLP 195
            V  LF+ HPDL+  F  FLP
Sbjct: 175 RVSQLFKGHPDLIMGFNTFLP 195


>gi|3281907|emb|CAA07550.1| transcription factor [Drosophila melanogaster]
          Length = 2061

 Score =  195 bits (496), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 127/404 (31%), Positives = 200/404 (49%), Gaps = 59/404 (14%)

Query: 354  SFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLAR 411
            +F +KV+  LR    Y  FLRCL L+ +EI++++EL  L    L ++PDL+         
Sbjct: 923  AFFDKVRKALRSPEVYDNFLRCLTLFNQEIVSKTELLGLASPFLMKFPDLL--------- 973

Query: 412  CEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRLDKS 471
                   L D +   S    G +   + +    R      +      DR           
Sbjct: 974  -----RWLTDFLGPPSGQPAGGLIDGMPLAATQRQGGGSSNS---SHDR----------- 1014

Query: 472  VAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELG 531
                            +  +  A+ +Q++DLS+C+R   SY  LP++ +    S RT L 
Sbjct: 1015 ---------------GTSHQSAAEYVQDVDLSSCKRLGASYCALPQSTVPKKCSGRTALC 1059

Query: 532  AEVLNDHWVSV-TSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEEL 590
             EVLND WVS  T  SED +F   RK Q+EE+++R ED+RFELD+++E  + T + +E L
Sbjct: 1060 REVLNDKWVSFPTWASEDSTFVTSRKTQFEETIYRTEDERFELDLVIEVNSATIRVLENL 1119

Query: 591  LEKINNNTIKTDGPIRVEDHFTA----LNLRCIERLYGDHGLDVMDVLRKNASLALPVIL 646
             +K++  + +      ++DH       ++ R I R+YGD   +++  ++KN  +A+P++L
Sbjct: 1120 QKKMSRMSTEELSKFHLDDHLGGTSQTIHQRAIHRIYGDKSGEIITGMKKNPFVAVPIVL 1179

Query: 647  TRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEI 706
             RLK K+EEW   +  FNK W E   K Y KSLDH++  FK  D K+L +K+L  EI+ +
Sbjct: 1180 KRLKVKEEEWREAQKTFNKQWREQNEKYYLKSLDHQAINFKPNDMKALRSKSLFNEIETL 1239

Query: 707  -SEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLI 749
              E+  +EDD +            PHL   Y D  I +D   L+
Sbjct: 1240 YDERHDQEDDAMEPFG--------PHLVLPYKDKTILDDAANLL 1275



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 49/114 (42%), Positives = 65/114 (57%), Gaps = 9/114 (7%)

Query: 25  PSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTA 84
           P G T    G  G    +L   DAL+YL  VK  + D+ + Y++FL++MK+FK+  IDT 
Sbjct: 252 PVGGTTPPQGQSGNATPRLKVEDALSYLDQVKYQYADQPQIYNNFLDIMKEFKSHCIDTP 311

Query: 85  GVIARVKELFKGHRDLILGFNTFLPKGYEI---------TLPLEDEQPPPKKPV 129
           GVI RV  LFKGH +LI GFN FLP GY+I         ++P+     PP  P 
Sbjct: 312 GVIERVSTLFKGHTELIYGFNMFLPPGYKIEIHSDALGCSVPVVSMPSPPGAPT 365



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 40/93 (43%), Positives = 51/93 (54%), Gaps = 13/93 (13%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI-------------TEVY 173
           +PVEF  AI +VNKIK RFQ     YK FL+IL+ Y++E K +              EVY
Sbjct: 565 QPVEFNHAITYVNKIKNRFQNQPAKYKKFLEILHDYQREQKVMKEGSLNQGKMLTEQEVY 624

Query: 174 QEVEALFQDHPDLLEEFTHFLPDSSGAASIHYV 206
            +V  LF    DLL EF  FLPD++   S  Y+
Sbjct: 625 TQVAKLFGQDEDLLREFGQFLPDATNHQSGQYM 657



 Score = 48.1 bits (113), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 21/87 (24%), Positives = 46/87 (52%), Gaps = 6/87 (6%)

Query: 115 TLPLEDEQPPPKKP------VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKS 168
           ++P+    PP  +       ++ E+A+++++++K ++     +Y +FLDI+  ++     
Sbjct: 250 SIPVGGTTPPQGQSGNATPRLKVEDALSYLDQVKYQYADQPQIYNNFLDIMKEFKSHCID 309

Query: 169 ITEVYQEVEALFQDHPDLLEEFTHFLP 195
              V + V  LF+ H +L+  F  FLP
Sbjct: 310 TPGVIERVSTLFKGHTELIYGFNMFLP 336



 Score = 43.9 bits (102), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 13/92 (14%)

Query: 31  VVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDF-KAQRIDTAG---- 85
           ++ G  G   Q +  N A+ Y+  +K+ FQ++  KY  FLE++ D+ + Q++   G    
Sbjct: 555 ILLGETGQQNQPVEFNHAITYVNKIKNRFQNQPAKYKKFLEILHDYQREQKVMKEGSLNQ 614

Query: 86  --------VIARVKELFKGHRDLILGFNTFLP 109
                   V  +V +LF    DL+  F  FLP
Sbjct: 615 GKMLTEQEVYTQVAKLFGQDEDLLREFGQFLP 646


>gi|359323473|ref|XP_535546.4| PREDICTED: paired amphipathic helix protein Sin3a [Canis lupus
           familiaris]
          Length = 1274

 Score =  195 bits (496), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 110/288 (38%), Positives = 168/288 (58%), Gaps = 17/288 (5%)

Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQ 558
           E+D ++C+R   SYR LPK+Y  P  + RT L  EVLND WVS  S SED +F   +K Q
Sbjct: 546 EIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVSSKKTQ 605

Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TAL 614
           YEE ++RCED+RFELD++LE+   T + +E + +K++  + +     R+++        +
Sbjct: 606 YEEHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSAEEQAKFRLDNTLGGTSEVI 665

Query: 615 NLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKN 674
           + + ++R+Y D   D++D LRKN S+A+P++L RLK K+EEW   +  FNKVW E   K 
Sbjct: 666 HRKALQRIYADKAADIIDGLRKNPSIAVPIVLKRLKMKEEEWREAQRGFNKVWREQNEKY 725

Query: 675 YHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRK---EDDVLLAIAAGNRRSIVPH 731
           Y KSLDH+   FKQ D+K L +K+L  EI+ I +++++   ED+  + I         PH
Sbjct: 726 YLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQATEDNAGVPIG--------PH 777

Query: 732 LEFEYSDPDIHEDLYQLIKYSCGEMCTTEQLD--KVMKIWTTFLEPML 777
           L   Y D  I ED   LI +        ++ D  K+ +I   F+  +L
Sbjct: 778 LSLAYEDKQILEDAAALIIHHVKRQTGIQKEDKYKIKQIMHHFIPDLL 825



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 50/103 (48%), Positives = 67/103 (65%), Gaps = 2/103 (1%)

Query: 18  MISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFK 77
           ++ S   P+     V G      Q+L   DAL+YL  VK  F  + + Y+DFL++MK+FK
Sbjct: 98  VVQSHAHPAPPVAPVQGQQQ--FQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFK 155

Query: 78  AQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLED 120
           +Q IDT GVI+RV +LFKGH DLI+GFNTFLP GY+I +   D
Sbjct: 156 SQSIDTPGVISRVSQLFKGHPDLIMGFNTFLPPGYKIEVQTND 198



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/88 (45%), Positives = 55/88 (62%), Gaps = 13/88 (14%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI-------------TEVY 173
           +PVEF  AIN+VNKIK RFQG   +YK+FL+IL+ Y+KE ++               EVY
Sbjct: 300 QPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVY 359

Query: 174 QEVEALFQDHPDLLEEFTHFLPDSSGAA 201
            +V  LF++  DLL EF  FLPD++ + 
Sbjct: 360 AQVARLFKNQEDLLSEFGQFLPDANSSV 387



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/70 (40%), Positives = 43/70 (61%), Gaps = 2/70 (2%)

Query: 343 NAMKSMFSQELSFCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPD 400
           +A K     E  F +KV+  LR  + Y+ FLRCL ++ +E+I+R+EL  LV   LG++P+
Sbjct: 455 DASKHGVGTESLFFDKVRKALRSAEAYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPE 514

Query: 401 LMDGFNGFLA 410
           L + F  FL 
Sbjct: 515 LFNWFKNFLG 524



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 9/81 (11%)

Query: 124 PPKKPVE---------FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQ 174
           PP  PV+          E+A+++++++K +F     VY  FLDI+  ++ ++     V  
Sbjct: 107 PPVAPVQGQQQFQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVIS 166

Query: 175 EVEALFQDHPDLLEEFTHFLP 195
            V  LF+ HPDL+  F  FLP
Sbjct: 167 RVSQLFKGHPDLIMGFNTFLP 187


>gi|157817123|ref|NP_001102231.1| paired amphipathic helix protein Sin3a [Rattus norvegicus]
 gi|149041757|gb|EDL95598.1| transcriptional regulator, SIN3A (yeast) (predicted) [Rattus
           norvegicus]
          Length = 1129

 Score =  195 bits (496), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 108/285 (37%), Positives = 166/285 (58%), Gaps = 11/285 (3%)

Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQ 558
           E+D ++C+R   SYR LPK+Y  P  + RT L  EVLND WVS  S SED +F   +K Q
Sbjct: 546 EIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVSSKKTQ 605

Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TAL 614
           YEE ++RCED+RFELD++LE+   T + +E + +K++  + +     R+++        +
Sbjct: 606 YEEHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSAEEQAKFRLDNTLGGTSEVI 665

Query: 615 NLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKN 674
           + + ++R+Y D   D++D LRKN S+A+P++L RLK K+EEW   +  FNKVW E   K 
Sbjct: 666 HRKALQRIYADKAADIIDGLRKNPSIAVPIVLKRLKMKEEEWREAQRGFNKVWREQNEKY 725

Query: 675 YHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEF 734
           Y KSLDH+   FKQ D+K L +K+L  EI+ I ++++++     A        + PHL  
Sbjct: 726 YLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQ-----ATEENAGVPVGPHLSL 780

Query: 735 EYSDPDIHEDLYQLIKYSCGEMCTTEQLD--KVMKIWTTFLEPML 777
            Y D  I ED   LI +        ++ D  K+ +I   F+  +L
Sbjct: 781 AYEDKQILEDAAALIIHHVKRQTGIQKEDKYKIKQIMHHFIPDLL 825



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 50/103 (48%), Positives = 67/103 (65%), Gaps = 2/103 (1%)

Query: 18  MISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFK 77
           ++ S   P+     V G      Q+L   DAL+YL  VK  F  + + Y+DFL++MK+FK
Sbjct: 98  VVQSHAHPAPSVAPVQGQQQ--FQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFK 155

Query: 78  AQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLED 120
           +Q IDT GVI+RV +LFKGH DLI+GFNTFLP GY+I +   D
Sbjct: 156 SQSIDTPGVISRVSQLFKGHPDLIMGFNTFLPPGYKIEVQTND 198



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/88 (45%), Positives = 55/88 (62%), Gaps = 13/88 (14%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI-------------TEVY 173
           +PVEF  AIN+VNKIK RFQG   +YK+FL+IL+ Y+KE ++               EVY
Sbjct: 300 QPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVY 359

Query: 174 QEVEALFQDHPDLLEEFTHFLPDSSGAA 201
            +V  LF++  DLL EF  FLPD++ + 
Sbjct: 360 AQVARLFKNQEDLLSEFGQFLPDANSSV 387



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 2/73 (2%)

Query: 343 NAMKSMFSQELSFCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPD 400
           +A K     E  F +KV+  LR  + Y+ FLRCL ++ +E+I+R+EL  LV   LG++P+
Sbjct: 455 DASKHGVGTESLFFDKVRKALRSAEAYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPE 514

Query: 401 LMDGFNGFLARCE 413
           L + F  FL   E
Sbjct: 515 LFNWFKNFLGYKE 527



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 40/67 (59%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           ++ E+A+++++++K +F     VY  FLDI+  ++ ++     V   V  LF+ HPDL+ 
Sbjct: 121 LKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIM 180

Query: 189 EFTHFLP 195
            F  FLP
Sbjct: 181 GFNTFLP 187


>gi|726286|gb|AAA89119.1| mSin3A [Mus musculus]
          Length = 1274

 Score =  195 bits (496), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 108/285 (37%), Positives = 166/285 (58%), Gaps = 11/285 (3%)

Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQ 558
           E+D ++C+R   SYR LPK+Y  P  + RT L  EVLND WVS  S SED +F   +K Q
Sbjct: 546 EIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVSSKKTQ 605

Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TAL 614
           YEE ++RCED+RFELD++LE+   T + +E + +K++  + +     R+++        +
Sbjct: 606 YEEHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSAEEQAKFRLDNTLGGTSEVI 665

Query: 615 NLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKN 674
           + + ++R+Y D   D++D LRKN S+A+P++L RLK K+EEW   +  FNKVW E   K 
Sbjct: 666 HRKALQRIYADKAADIIDGLRKNPSIAVPIVLKRLKMKEEEWREAQRGFNKVWREQNEKY 725

Query: 675 YHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEF 734
           Y KSLDH+   FKQ D+K L +K+L  EI+ I ++++++     A        + PHL  
Sbjct: 726 YLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQ-----ATEENAGVPVGPHLSL 780

Query: 735 EYSDPDIHEDLYQLIKYSCGEMCTTEQLD--KVMKIWTTFLEPML 777
            Y D  I ED   LI +        ++ D  K+ +I   F+  +L
Sbjct: 781 AYEDKQILEDAAALIIHHVKRQTGIQKEDKYKIKQIMHHFIPDLL 825



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 50/103 (48%), Positives = 67/103 (65%), Gaps = 2/103 (1%)

Query: 18  MISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFK 77
           ++ S   P+     V G      Q+L   DAL+YL  VK  F  + + Y+DFL++MK+FK
Sbjct: 98  VVQSHAHPAPPVAPVQGQQQ--FQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFK 155

Query: 78  AQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLED 120
           +Q IDT GVI+RV +LFKGH DLI+GFNTFLP GY+I +   D
Sbjct: 156 SQSIDTPGVISRVSQLFKGHPDLIMGFNTFLPPGYKIEVQTND 198



 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/90 (44%), Positives = 56/90 (62%), Gaps = 13/90 (14%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI-------------TEVY 173
           +PVEF  AIN+VNKIK RFQG   +YK+FL+IL+ Y+KE ++               EVY
Sbjct: 300 QPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVY 359

Query: 174 QEVEALFQDHPDLLEEFTHFLPDSSGAASI 203
            +V  LF++  DLL EF  FLPD++ +  +
Sbjct: 360 AQVARLFKNQEDLLSEFGQFLPDANSSVLL 389



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/70 (40%), Positives = 43/70 (61%), Gaps = 2/70 (2%)

Query: 343 NAMKSMFSQELSFCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPD 400
           +A K     E  F +KV+  LR  + Y+ FLRCL ++ +E+I+R+EL  LV   LG++P+
Sbjct: 455 DASKHGVGTESLFFDKVRKALRSAEAYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPE 514

Query: 401 LMDGFNGFLA 410
           L + F  FL 
Sbjct: 515 LFNWFKNFLG 524



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 9/81 (11%)

Query: 124 PPKKPVE---------FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQ 174
           PP  PV+          E+A+++++++K +F     VY  FLDI+  ++ ++     V  
Sbjct: 107 PPVAPVQGQQQFQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVIS 166

Query: 175 EVEALFQDHPDLLEEFTHFLP 195
            V  LF+ HPDL+  F  FLP
Sbjct: 167 RVSQLFKGHPDLIMGFNTFLP 187


>gi|30931163|gb|AAH52716.1| Sin3a protein [Mus musculus]
          Length = 1197

 Score =  195 bits (496), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 108/285 (37%), Positives = 166/285 (58%), Gaps = 11/285 (3%)

Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQ 558
           E+D ++C+R   SYR LPK+Y  P  + RT L  EVLND WVS  S SED +F   +K Q
Sbjct: 546 EIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVSSKKTQ 605

Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TAL 614
           YEE ++RCED+RFELD++LE+   T + +E + +K++  + +     R+++        +
Sbjct: 606 YEEHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSAEEQAKFRLDNTLGGTSEVI 665

Query: 615 NLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKN 674
           + + ++R+Y D   D++D LRKN S+A+P++L RLK K+EEW   +  FNKVW E   K 
Sbjct: 666 HRKALQRIYADKAADIIDGLRKNPSIAVPIVLKRLKMKEEEWREAQRGFNKVWREQNEKY 725

Query: 675 YHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEF 734
           Y KSLDH+   FKQ D+K L +K+L  EI+ I ++++++     A        + PHL  
Sbjct: 726 YLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQ-----ATEENAGVPVGPHLSL 780

Query: 735 EYSDPDIHEDLYQLIKYSCGEMCTTEQLD--KVMKIWTTFLEPML 777
            Y D  I ED   LI +        ++ D  K+ +I   F+  +L
Sbjct: 781 AYEDKQILEDAAALIIHHVKRQTGIQKEDKYKIKQIMHHFIPDLL 825



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 50/103 (48%), Positives = 67/103 (65%), Gaps = 2/103 (1%)

Query: 18  MISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFK 77
           ++ S   P+     V G      Q+L   DAL+YL  VK  F  + + Y+DFL++MK+FK
Sbjct: 98  VVQSHAHPAPPVAPVQGQQQ--FQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFK 155

Query: 78  AQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLED 120
           +Q IDT GVI+RV +LFKGH DLI+GFNTFLP GY+I +   D
Sbjct: 156 SQSIDTPGVISRVSQLFKGHPDLIMGFNTFLPPGYKIEVQTND 198



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/88 (45%), Positives = 55/88 (62%), Gaps = 13/88 (14%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI-------------TEVY 173
           +PVEF  AIN+VNKIK RFQG   +YK+FL+IL+ Y+KE ++               EVY
Sbjct: 300 QPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVY 359

Query: 174 QEVEALFQDHPDLLEEFTHFLPDSSGAA 201
            +V  LF++  DLL EF  FLPD++ + 
Sbjct: 360 AQVARLFKNQEDLLSEFGQFLPDANSSV 387



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/70 (40%), Positives = 43/70 (61%), Gaps = 2/70 (2%)

Query: 343 NAMKSMFSQELSFCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPD 400
           +A K     E  F +KV+  LR  + Y+ FLRCL ++ +E+I+R+EL  LV   LG++P+
Sbjct: 455 DASKHGVGTESLFFDKVRKALRSAEAYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPE 514

Query: 401 LMDGFNGFLA 410
           L + F  FL 
Sbjct: 515 LFNWFKNFLG 524



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 9/81 (11%)

Query: 124 PPKKPVE---------FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQ 174
           PP  PV+          E+A+++++++K +F     VY  FLDI+  ++ ++     V  
Sbjct: 107 PPVAPVQGQQQFQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVIS 166

Query: 175 EVEALFQDHPDLLEEFTHFLP 195
            V  LF+ HPDL+  F  FLP
Sbjct: 167 RVSQLFKGHPDLIMGFNTFLP 187


>gi|345327722|ref|XP_001512119.2| PREDICTED: paired amphipathic helix protein Sin3a [Ornithorhynchus
           anatinus]
          Length = 1216

 Score =  195 bits (496), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 111/288 (38%), Positives = 169/288 (58%), Gaps = 17/288 (5%)

Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQ 558
           E+D ++C+R   SYR LPK+Y  P  + RT L  EVLND WVS  S SED +F   +K Q
Sbjct: 487 EIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVSSKKTQ 546

Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TAL 614
           YEE ++RCED+RFELD++LE+   T + +E + +K++  + +     R+++        +
Sbjct: 547 YEEHIYRCEDERFELDVVLETNLATIRVLETIQKKLSRLSAEEQAKFRLDNTLGGTSEVI 606

Query: 615 NLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKN 674
           + + ++R+Y D   D++D LRKN S+A+P++L RLK K+EEW   +  FNKVW E   K 
Sbjct: 607 HRKALQRIYADKAADIIDGLRKNPSVAVPIVLKRLKMKEEEWREAQRGFNKVWREQNEKY 666

Query: 675 YHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRK---EDDVLLAIAAGNRRSIVPH 731
           Y KSLDH+   FKQ D+K L +K+L  EI+ I +++++   ED+    + AG      PH
Sbjct: 667 YLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQATEDNA--GVPAG------PH 718

Query: 732 LEFEYSDPDIHEDLYQLIKYSCGEMCTTEQLD--KVMKIWTTFLEPML 777
           L   Y D  I ED   LI +        ++ D  K+ +I   F+  +L
Sbjct: 719 LSLAYEDKQILEDAAALIIHHVKRQTGIQKEDKYKIKQIMHHFIPDLL 766



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 44/74 (59%), Positives = 57/74 (77%)

Query: 47  DALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNT 106
           DAL+YL  VK  F  + + Y+DFL++MK+FK+Q IDT GVI+RV +LFKGH DLI+GFNT
Sbjct: 66  DALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIMGFNT 125

Query: 107 FLPKGYEITLPLED 120
           FLP GY+I +   D
Sbjct: 126 FLPPGYKIEVQTND 139



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/90 (44%), Positives = 56/90 (62%), Gaps = 13/90 (14%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI-------------TEVY 173
           +PVEF  AIN+VNKIK RFQG   +YK+FL+IL+ Y+KE ++               EVY
Sbjct: 241 QPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVY 300

Query: 174 QEVEALFQDHPDLLEEFTHFLPDSSGAASI 203
            +V  LF++  DLL EF  FLPD++ +  +
Sbjct: 301 AQVARLFKNQEDLLSEFGQFLPDANSSVLL 330



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/69 (42%), Positives = 41/69 (59%), Gaps = 2/69 (2%)

Query: 344 AMKSMFSQELSFCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDL 401
           A K     E  F EKV+  LR  + Y+ FLRCL ++ +E+I+R+EL  LV   LG++P+L
Sbjct: 397 ASKHGVGTESLFFEKVRKALRSSEAYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPEL 456

Query: 402 MDGFNGFLA 410
              F  FL 
Sbjct: 457 FTWFKNFLG 465



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 39/66 (59%)

Query: 130 EFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEE 189
           + E+A+++++++K +F     VY  FLDI+  ++ ++     V   V  LF+ HPDL+  
Sbjct: 63  QVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIMG 122

Query: 190 FTHFLP 195
           F  FLP
Sbjct: 123 FNTFLP 128


>gi|160333357|ref|NP_035508.2| paired amphipathic helix protein Sin3a isoform 1 [Mus musculus]
 gi|160333362|ref|NP_001103821.1| paired amphipathic helix protein Sin3a isoform 1 [Mus musculus]
 gi|308153557|sp|Q60520.3|SIN3A_MOUSE RecName: Full=Paired amphipathic helix protein Sin3a; AltName:
           Full=Histone deacetylase complex subunit Sin3a; AltName:
           Full=Transcriptional corepressor Sin3a
 gi|148693936|gb|EDL25883.1| transcriptional regulator, SIN3A (yeast), isoform CRA_a [Mus
           musculus]
          Length = 1274

 Score =  195 bits (496), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 108/285 (37%), Positives = 166/285 (58%), Gaps = 11/285 (3%)

Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQ 558
           E+D ++C+R   SYR LPK+Y  P  + RT L  EVLND WVS  S SED +F   +K Q
Sbjct: 546 EIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVSSKKTQ 605

Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TAL 614
           YEE ++RCED+RFELD++LE+   T + +E + +K++  + +     R+++        +
Sbjct: 606 YEEHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSAEEQAKFRLDNTLGGTSEVI 665

Query: 615 NLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKN 674
           + + ++R+Y D   D++D LRKN S+A+P++L RLK K+EEW   +  FNKVW E   K 
Sbjct: 666 HRKALQRIYADKAADIIDGLRKNPSIAVPIVLKRLKMKEEEWREAQRGFNKVWREQNEKY 725

Query: 675 YHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEF 734
           Y KSLDH+   FKQ D+K L +K+L  EI+ I ++++++     A        + PHL  
Sbjct: 726 YLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQ-----ATEENAGVPVGPHLSL 780

Query: 735 EYSDPDIHEDLYQLIKYSCGEMCTTEQLD--KVMKIWTTFLEPML 777
            Y D  I ED   LI +        ++ D  K+ +I   F+  +L
Sbjct: 781 AYEDKQILEDAAALIIHHVKRQTGIQKEDKYKIKQIMHHFIPDLL 825



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 50/103 (48%), Positives = 67/103 (65%), Gaps = 2/103 (1%)

Query: 18  MISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFK 77
           ++ S   P+     V G      Q+L   DAL+YL  VK  F  + + Y+DFL++MK+FK
Sbjct: 98  VVQSHAHPAPPVAPVQGQQQ--FQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFK 155

Query: 78  AQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLED 120
           +Q IDT GVI+RV +LFKGH DLI+GFNTFLP GY+I +   D
Sbjct: 156 SQSIDTPGVISRVSQLFKGHPDLIMGFNTFLPPGYKIEVQTND 198



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/90 (44%), Positives = 56/90 (62%), Gaps = 13/90 (14%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI-------------TEVY 173
           +PVEF  AIN+VNKIK RFQG   +YK+FL+IL+ Y+KE ++               EVY
Sbjct: 300 QPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVY 359

Query: 174 QEVEALFQDHPDLLEEFTHFLPDSSGAASI 203
            +V  LF++  DLL EF  FLPD++ +  +
Sbjct: 360 AQVARLFKNQEDLLSEFGQFLPDANSSVLL 389



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/70 (40%), Positives = 43/70 (61%), Gaps = 2/70 (2%)

Query: 343 NAMKSMFSQELSFCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPD 400
           +A K     E  F +KV+  LR  + Y+ FLRCL ++ +E+I+R+EL  LV   LG++P+
Sbjct: 455 DASKHGVGTESLFFDKVRKALRSAEAYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPE 514

Query: 401 LMDGFNGFLA 410
           L + F  FL 
Sbjct: 515 LFNWFKNFLG 524



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 9/81 (11%)

Query: 124 PPKKPVE---------FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQ 174
           PP  PV+          E+A+++++++K +F     VY  FLDI+  ++ ++     V  
Sbjct: 107 PPVAPVQGQQQFQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVIS 166

Query: 175 EVEALFQDHPDLLEEFTHFLP 195
            V  LF+ HPDL+  F  FLP
Sbjct: 167 RVSQLFKGHPDLIMGFNTFLP 187


>gi|195485284|ref|XP_002091028.1| GE13437 [Drosophila yakuba]
 gi|194177129|gb|EDW90740.1| GE13437 [Drosophila yakuba]
          Length = 2053

 Score =  195 bits (496), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 129/405 (31%), Positives = 203/405 (50%), Gaps = 61/405 (15%)

Query: 354  SFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLA- 410
            +F +KV+  L+    Y  FLRCL L+ +EI++++EL  LV   L ++P+L+  F  FL  
Sbjct: 925  AFFDKVRKALKSPEVYDNFLRCLALFNQEIVSKTELLGLVSPFLMKFPELLRWFTDFLGP 984

Query: 411  RCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRLDK 470
               +    L D M   +   +G               +   D G                
Sbjct: 985  PSGQPAGGLIDGMPLAATQRQG-----------GGSSNSSHDRG---------------- 1017

Query: 471  SVAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTEL 530
                         S + S  +Y+    Q++DLS+C+R   SY  LP++ +    S RT L
Sbjct: 1018 -------------SSHQSAAEYV----QDVDLSSCKRLGASYCALPQSTVPKKCSGRTAL 1060

Query: 531  GAEVLNDHWVSV-TSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEE 589
              EVLND WVS  T  SED +F   RK Q+EE+++R ED+RFELD+++E  + T + +E 
Sbjct: 1061 CREVLNDKWVSFPTWASEDSTFVTSRKTQFEETIYRTEDERFELDLVIEVNSATIRVLEN 1120

Query: 590  LLEKINNNTIKTDGPIRVEDHFTA----LNLRCIERLYGDHGLDVMDVLRKNASLALPVI 645
            + +K++  + +      ++DH       ++ R I R+YGD   +++  ++KN  +A+P++
Sbjct: 1121 VQKKMSRMSTEELSKFHLDDHLGGTSQTIHQRAIHRIYGDKSGEIIQGMKKNPFVAVPIV 1180

Query: 646  LTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKE 705
            L RLK K+EEW   +  FNK W E   K Y KSLDH++  FK  D K+L +K+L  EI+ 
Sbjct: 1181 LKRLKVKEEEWREAQKTFNKQWREQNEKYYLKSLDHQAINFKPNDMKALRSKSLFNEIET 1240

Query: 706  I-SEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLI 749
            +  E+  +EDD +            PHL   Y D  I +D   L+
Sbjct: 1241 LYDERHDQEDDAMEPFG--------PHLVLPYKDKTILDDAANLL 1277



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 49/114 (42%), Positives = 65/114 (57%), Gaps = 9/114 (7%)

Query: 25  PSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTA 84
           P G T    G  G    +L   DAL+YL  VK  + D+ + Y++FL++MK+FK+  IDT 
Sbjct: 253 PVGGTTPPQGQSGNATPRLKVEDALSYLDQVKYQYADQPQIYNNFLDIMKEFKSHCIDTP 312

Query: 85  GVIARVKELFKGHRDLILGFNTFLPKGYEI---------TLPLEDEQPPPKKPV 129
           GVI RV  LFKGH +LI GFN FLP GY+I         ++P+     PP  P 
Sbjct: 313 GVIERVSTLFKGHTELIYGFNMFLPPGYKIEIHSDALGCSVPVVSMPSPPGAPT 366



 Score = 76.3 bits (186), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 41/93 (44%), Positives = 51/93 (54%), Gaps = 13/93 (13%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI-------------TEVY 173
           +PVEF  AI +VNKIK RFQ     YK FL+IL+ Y+KE K +              EVY
Sbjct: 567 QPVEFNHAITYVNKIKNRFQNQPAKYKKFLEILHAYQKEQKVMKEGSLNQGKMLTEQEVY 626

Query: 174 QEVEALFQDHPDLLEEFTHFLPDSSGAASIHYV 206
            +V  LF    DLL EF  FLPD++   S  Y+
Sbjct: 627 TQVAKLFGQDEDLLREFGQFLPDATNHQSGQYM 659



 Score = 47.8 bits (112), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 21/87 (24%), Positives = 46/87 (52%), Gaps = 6/87 (6%)

Query: 115 TLPLEDEQPPPKKP------VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKS 168
           ++P+    PP  +       ++ E+A+++++++K ++     +Y +FLDI+  ++     
Sbjct: 251 SIPVGGTTPPQGQSGNATPRLKVEDALSYLDQVKYQYADQPQIYNNFLDIMKEFKSHCID 310

Query: 169 ITEVYQEVEALFQDHPDLLEEFTHFLP 195
              V + V  LF+ H +L+  F  FLP
Sbjct: 311 TPGVIERVSTLFKGHTELIYGFNMFLP 337



 Score = 42.7 bits (99), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 13/92 (14%)

Query: 31  VVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDF-KAQRIDTAG---- 85
           ++ G  G   Q +  N A+ Y+  +K+ FQ++  KY  FLE++  + K Q++   G    
Sbjct: 557 ILLGETGQQNQPVEFNHAITYVNKIKNRFQNQPAKYKKFLEILHAYQKEQKVMKEGSLNQ 616

Query: 86  --------VIARVKELFKGHRDLILGFNTFLP 109
                   V  +V +LF    DL+  F  FLP
Sbjct: 617 GKMLTEQEVYTQVAKLFGQDEDLLREFGQFLP 648


>gi|431893650|gb|ELK03471.1| Paired amphipathic helix protein Sin3a [Pteropus alecto]
          Length = 1288

 Score =  195 bits (496), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 108/285 (37%), Positives = 166/285 (58%), Gaps = 11/285 (3%)

Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQ 558
           E+D ++C+R   SYR LPK+Y  P  + RT L  EVLND WVS  S SED +F   +K Q
Sbjct: 547 EIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVSSKKTQ 606

Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TAL 614
           YEE ++RCED+RFELD++LE+   T + +E + +K++  + +     R+++        +
Sbjct: 607 YEEHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSAEEQAKFRLDNTLGGTSEVI 666

Query: 615 NLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKN 674
           + + ++R+Y D   D++D LRKN S+A+P++L RLK K+EEW   +  FNKVW E   K 
Sbjct: 667 HRKALQRIYADKAADIIDGLRKNPSIAVPIVLKRLKMKEEEWREAQRGFNKVWREQNEKY 726

Query: 675 YHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEF 734
           Y KSLDH+   FKQ D+K L +K+L  EI+ I ++++++     A        + PHL  
Sbjct: 727 YLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQ-----ATEENAGVPVGPHLSL 781

Query: 735 EYSDPDIHEDLYQLIKYSCGEMCTTEQLD--KVMKIWTTFLEPML 777
            Y D  I ED   LI +        ++ D  K+ +I   F+  +L
Sbjct: 782 AYEDKQILEDAAALIIHHVKRQTGIQKEDKYKIKQIMHHFIPDLL 826



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 46/80 (57%), Positives = 60/80 (75%)

Query: 41  QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDL 100
           Q+L   DAL+YL  VK  F  + + Y+DFL++MK+FK+Q IDT GVI+RV +LFKGH DL
Sbjct: 120 QRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDL 179

Query: 101 ILGFNTFLPKGYEITLPLED 120
           I+GFNTFLP GY+I +   D
Sbjct: 180 IMGFNTFLPPGYKIEVQTND 199



 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/88 (45%), Positives = 55/88 (62%), Gaps = 13/88 (14%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI-------------TEVY 173
           +PVEF  AIN+VNKIK RFQG   +YK+FL+IL+ Y+KE ++               EVY
Sbjct: 301 QPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVY 360

Query: 174 QEVEALFQDHPDLLEEFTHFLPDSSGAA 201
            +V  LF++  DLL EF  FLPD++ + 
Sbjct: 361 AQVARLFKNQEDLLSEFGQFLPDANSSV 388



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/70 (40%), Positives = 43/70 (61%), Gaps = 2/70 (2%)

Query: 343 NAMKSMFSQELSFCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPD 400
           +A K     E  F +KV+  LR  + Y+ FLRCL ++ +E+I+R+EL  LV   LG++P+
Sbjct: 456 DASKHGVGTESLFFDKVRKALRSAEAYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPE 515

Query: 401 LMDGFNGFLA 410
           L + F  FL 
Sbjct: 516 LFNWFKNFLG 525



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 9/81 (11%)

Query: 124 PPKKPVE---------FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQ 174
           PP  PV+          E+A+++++++K +F     VY  FLDI+  ++ ++     V  
Sbjct: 108 PPVAPVQGQQQFQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVIS 167

Query: 175 EVEALFQDHPDLLEEFTHFLP 195
            V  LF+ HPDL+  F  FLP
Sbjct: 168 RVSQLFKGHPDLIMGFNTFLP 188


>gi|354471477|ref|XP_003497969.1| PREDICTED: paired amphipathic helix protein Sin3a [Cricetulus
           griseus]
 gi|344247678|gb|EGW03782.1| Paired amphipathic helix protein Sin3a [Cricetulus griseus]
          Length = 1274

 Score =  195 bits (496), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 108/285 (37%), Positives = 166/285 (58%), Gaps = 11/285 (3%)

Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQ 558
           E+D ++C+R   SYR LPK+Y  P  + RT L  EVLND WVS  S SED +F   +K Q
Sbjct: 546 EIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVSSKKTQ 605

Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TAL 614
           YEE ++RCED+RFELD++LE+   T + +E + +K++  + +     R+++        +
Sbjct: 606 YEEHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSAEEQAKFRLDNTLGGTSEVI 665

Query: 615 NLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKN 674
           + + ++R+Y D   D++D LRKN S+A+P++L RLK K+EEW   +  FNKVW E   K 
Sbjct: 666 HRKALQRIYADKAADIIDGLRKNPSIAVPIVLKRLKMKEEEWREAQRGFNKVWREQNEKY 725

Query: 675 YHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEF 734
           Y KSLDH+   FKQ D+K L +K+L  EI+ I ++++++     A        + PHL  
Sbjct: 726 YLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQ-----ATEENAGVPVGPHLSL 780

Query: 735 EYSDPDIHEDLYQLIKYSCGEMCTTEQLD--KVMKIWTTFLEPML 777
            Y D  I ED   LI +        ++ D  K+ +I   F+  +L
Sbjct: 781 AYEDKQILEDAAALIIHHVKRQTGIQKEDKYKIKQIMHHFIPDLL 825



 Score =  102 bits (253), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 50/103 (48%), Positives = 67/103 (65%), Gaps = 2/103 (1%)

Query: 18  MISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFK 77
           ++ S   P+     V G      Q+L   DAL+YL  VK  F  + + Y+DFL++MK+FK
Sbjct: 98  VVQSHAHPAPPVAPVQGQQQ--FQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFK 155

Query: 78  AQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLED 120
           +Q IDT GVI+RV +LFKGH DLI+GFNTFLP GY+I +   D
Sbjct: 156 SQSIDTPGVISRVSQLFKGHPDLIMGFNTFLPPGYKIEVQTND 198



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/88 (45%), Positives = 55/88 (62%), Gaps = 13/88 (14%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI-------------TEVY 173
           +PVEF  AIN+VNKIK RFQG   +YK+FL+IL+ Y+KE ++               EVY
Sbjct: 300 QPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVY 359

Query: 174 QEVEALFQDHPDLLEEFTHFLPDSSGAA 201
            +V  LF++  DLL EF  FLPD++ + 
Sbjct: 360 AQVARLFKNQEDLLSEFGQFLPDANSSV 387



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/70 (40%), Positives = 42/70 (60%), Gaps = 2/70 (2%)

Query: 343 NAMKSMFSQELSFCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPD 400
           +A K     E  F +KV+  LR  + Y  FLRCL ++ +E+I+R+EL  LV   LG++P+
Sbjct: 455 DASKHGVGTESLFFDKVRKALRSAEAYDNFLRCLVIFNQEVISRAELVQLVSPFLGKFPE 514

Query: 401 LMDGFNGFLA 410
           L + F  FL 
Sbjct: 515 LFNWFKNFLG 524



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 9/81 (11%)

Query: 124 PPKKPVE---------FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQ 174
           PP  PV+          E+A+++++++K +F     VY  FLDI+  ++ ++     V  
Sbjct: 107 PPVAPVQGQQQFQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVIS 166

Query: 175 EVEALFQDHPDLLEEFTHFLP 195
            V  LF+ HPDL+  F  FLP
Sbjct: 167 RVSQLFKGHPDLIMGFNTFLP 187


>gi|160333360|ref|NP_001103820.1| paired amphipathic helix protein Sin3a isoform 2 [Mus musculus]
          Length = 1277

 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 108/285 (37%), Positives = 166/285 (58%), Gaps = 11/285 (3%)

Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQ 558
           E+D ++C+R   SYR LPK+Y  P  + RT L  EVLND WVS  S SED +F   +K Q
Sbjct: 546 EIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVSSKKTQ 605

Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TAL 614
           YEE ++RCED+RFELD++LE+   T + +E + +K++  + +     R+++        +
Sbjct: 606 YEEHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSAEEQAKFRLDNTLGGTSEVI 665

Query: 615 NLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKN 674
           + + ++R+Y D   D++D LRKN S+A+P++L RLK K+EEW   +  FNKVW E   K 
Sbjct: 666 HRKALQRIYADKAADIIDGLRKNPSIAVPIVLKRLKMKEEEWREAQRGFNKVWREQNEKY 725

Query: 675 YHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEF 734
           Y KSLDH+   FKQ D+K L +K+L  EI+ I ++++++     A        + PHL  
Sbjct: 726 YLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQ-----ATEENAGVPVGPHLSL 780

Query: 735 EYSDPDIHEDLYQLIKYSCGEMCTTEQLD--KVMKIWTTFLEPML 777
            Y D  I ED   LI +        ++ D  K+ +I   F+  +L
Sbjct: 781 AYEDKQILEDAAALIIHHVKRQTGIQKEDKYKIKQIMHHFIPDLL 825



 Score =  102 bits (253), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 50/103 (48%), Positives = 67/103 (65%), Gaps = 2/103 (1%)

Query: 18  MISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFK 77
           ++ S   P+     V G      Q+L   DAL+YL  VK  F  + + Y+DFL++MK+FK
Sbjct: 98  VVQSHAHPAPPVAPVQGQQQ--FQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFK 155

Query: 78  AQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLED 120
           +Q IDT GVI+RV +LFKGH DLI+GFNTFLP GY+I +   D
Sbjct: 156 SQSIDTPGVISRVSQLFKGHPDLIMGFNTFLPPGYKIEVQTND 198



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/90 (44%), Positives = 56/90 (62%), Gaps = 13/90 (14%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI-------------TEVY 173
           +PVEF  AIN+VNKIK RFQG   +YK+FL+IL+ Y+KE ++               EVY
Sbjct: 300 QPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVY 359

Query: 174 QEVEALFQDHPDLLEEFTHFLPDSSGAASI 203
            +V  LF++  DLL EF  FLPD++ +  +
Sbjct: 360 AQVARLFKNQEDLLSEFGQFLPDANSSVLL 389



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/70 (40%), Positives = 43/70 (61%), Gaps = 2/70 (2%)

Query: 343 NAMKSMFSQELSFCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPD 400
           +A K     E  F +KV+  LR  + Y+ FLRCL ++ +E+I+R+EL  LV   LG++P+
Sbjct: 455 DASKHGVGTESLFFDKVRKALRSAEAYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPE 514

Query: 401 LMDGFNGFLA 410
           L + F  FL 
Sbjct: 515 LFNWFKNFLG 524



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 9/81 (11%)

Query: 124 PPKKPVE---------FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQ 174
           PP  PV+          E+A+++++++K +F     VY  FLDI+  ++ ++     V  
Sbjct: 107 PPVAPVQGQQQFQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVIS 166

Query: 175 EVEALFQDHPDLLEEFTHFLP 195
            V  LF+ HPDL+  F  FLP
Sbjct: 167 RVSQLFKGHPDLIMGFNTFLP 187


>gi|296213732|ref|XP_002753399.1| PREDICTED: paired amphipathic helix protein Sin3a isoform 1
           [Callithrix jacchus]
 gi|296213734|ref|XP_002753400.1| PREDICTED: paired amphipathic helix protein Sin3a isoform 2
           [Callithrix jacchus]
          Length = 1273

 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 108/285 (37%), Positives = 166/285 (58%), Gaps = 11/285 (3%)

Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQ 558
           E+D ++C+R   SYR LPK+Y  P  + RT L  EVLND WVS  S SED +F   +K Q
Sbjct: 545 EIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVSSKKTQ 604

Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TAL 614
           YEE ++RCED+RFELD++LE+   T + +E + +K++  + +     R+++        +
Sbjct: 605 YEEHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSAEEQAKFRLDNTLGGTSEVI 664

Query: 615 NLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKN 674
           + + ++R+Y D   D++D LRKN S+A+P++L RLK K+EEW   +  FNKVW E   K 
Sbjct: 665 HRKALQRIYADKAADIIDGLRKNPSIAVPIVLKRLKMKEEEWREAQRGFNKVWREQNEKY 724

Query: 675 YHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEF 734
           Y KSLDH+   FKQ D+K L +K+L  EI+ I ++++++     A        + PHL  
Sbjct: 725 YLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQ-----ATEENAGVPVGPHLSL 779

Query: 735 EYSDPDIHEDLYQLIKYSCGEMCTTEQLD--KVMKIWTTFLEPML 777
            Y D  I ED   LI +        ++ D  K+ +I   F+  +L
Sbjct: 780 AYEDKQILEDAAALIIHHVKRQTGIQKEDKYKIKQIMHHFIPDLL 824



 Score =  102 bits (253), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 50/103 (48%), Positives = 67/103 (65%), Gaps = 2/103 (1%)

Query: 18  MISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFK 77
           ++ S   P+     V G      Q+L   DAL+YL  VK  F  + + Y+DFL++MK+FK
Sbjct: 98  VVQSHAHPAPPVAPVQGQQQ--FQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFK 155

Query: 78  AQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLED 120
           +Q IDT GVI+RV +LFKGH DLI+GFNTFLP GY+I +   D
Sbjct: 156 SQSIDTPGVISRVSQLFKGHPDLIMGFNTFLPPGYKIEVQTND 198



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/90 (44%), Positives = 56/90 (62%), Gaps = 13/90 (14%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI-------------TEVY 173
           +PVEF  AIN+VNKIK RFQG   +YK+FL+IL+ Y+KE ++               EVY
Sbjct: 300 QPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVY 359

Query: 174 QEVEALFQDHPDLLEEFTHFLPDSSGAASI 203
            +V  LF++  DLL EF  FLPD++ +  +
Sbjct: 360 AQVARLFKNQEDLLSEFGQFLPDANSSVLL 389



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 39/58 (67%), Gaps = 2/58 (3%)

Query: 355 FCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLA 410
           F +KV+  LR  + Y+ FLRCL ++ +E+I+R+EL  LV   LG++P+L + F  FL 
Sbjct: 466 FFDKVRKALRSAEAYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPELFNWFKNFLG 523



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 9/81 (11%)

Query: 124 PPKKPVE---------FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQ 174
           PP  PV+          E+A+++++++K +F     VY  FLDI+  ++ ++     V  
Sbjct: 107 PPVAPVQGQQQFQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVIS 166

Query: 175 EVEALFQDHPDLLEEFTHFLP 195
            V  LF+ HPDL+  F  FLP
Sbjct: 167 RVSQLFKGHPDLIMGFNTFLP 187


>gi|33150820|gb|AAP97288.1|AF418569_1 MSIN3A [Homo sapiens]
          Length = 1273

 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 108/285 (37%), Positives = 166/285 (58%), Gaps = 11/285 (3%)

Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQ 558
           E+D ++C+R   SYR LPK+Y  P  + RT L  EVLND WVS  S SED +F   +K Q
Sbjct: 545 EIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVSSKKTQ 604

Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TAL 614
           YEE ++RCED+RFELD++LE+   T + +E + +K++  + +     R+++        +
Sbjct: 605 YEEHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSAEEQAKFRLDNTLGGTSEVI 664

Query: 615 NLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKN 674
           + + ++R+Y D   D++D LRKN S+A+P++L RLK K+EEW   +  FNKVW E   K 
Sbjct: 665 HRKALQRIYADKAADIIDGLRKNPSIAVPIVLKRLKMKEEEWREAQRGFNKVWREQNEKY 724

Query: 675 YHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEF 734
           Y KSLDH+   FKQ D+K L +K+L  EI+ I ++++++     A        + PHL  
Sbjct: 725 YLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQ-----ATEENAGVPVGPHLSL 779

Query: 735 EYSDPDIHEDLYQLIKYSCGEMCTTEQLD--KVMKIWTTFLEPML 777
            Y D  I ED   LI +        ++ D  K+ +I   F+  +L
Sbjct: 780 AYEDKQILEDAAALIIHHVKRQTGIQKEDKYKIKQIMHHFIPDLL 824



 Score =  102 bits (253), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 50/103 (48%), Positives = 67/103 (65%), Gaps = 2/103 (1%)

Query: 18  MISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFK 77
           ++ S   P+     V G      Q+L   DAL+YL  VK  F  + + Y+DFL++MK+FK
Sbjct: 98  VVQSHAHPAPPVAPVQGQQQ--FQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFK 155

Query: 78  AQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLED 120
           +Q IDT GVI+RV +LFKGH DLI+GFNTFLP GY+I +   D
Sbjct: 156 SQSIDTPGVISRVSQLFKGHPDLIMGFNTFLPPGYKIEVQTND 198



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/88 (45%), Positives = 55/88 (62%), Gaps = 13/88 (14%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI-------------TEVY 173
           +PVEF  AIN+VNKIK RFQG   +YK+FL+IL+ Y+KE ++               EVY
Sbjct: 300 QPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVY 359

Query: 174 QEVEALFQDHPDLLEEFTHFLPDSSGAA 201
            +V  LF++  DLL EF  FLPD++ + 
Sbjct: 360 AQVARLFKNQEDLLSEFGQFLPDANSSV 387



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 39/58 (67%), Gaps = 2/58 (3%)

Query: 355 FCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLA 410
           F +KV+  LR  + Y+ FLRCL ++ +E+I+R+EL  LV   LG++P+L + F  FL 
Sbjct: 466 FFDKVRKALRSAEAYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPELFNWFKNFLG 523



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 9/81 (11%)

Query: 124 PPKKPVE---------FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQ 174
           PP  PV+          E+A+++++++K +F     VY  FLDI+  ++ ++     V  
Sbjct: 107 PPVAPVQGQQQFQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVIS 166

Query: 175 EVEALFQDHPDLLEEFTHFLP 195
            V  LF+ HPDL+  F  FLP
Sbjct: 167 RVSQLFKGHPDLIMGFNTFLP 187


>gi|410960802|ref|XP_003986976.1| PREDICTED: paired amphipathic helix protein Sin3a isoform 1 [Felis
           catus]
 gi|410960804|ref|XP_003986977.1| PREDICTED: paired amphipathic helix protein Sin3a isoform 2 [Felis
           catus]
          Length = 1274

 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 108/285 (37%), Positives = 166/285 (58%), Gaps = 11/285 (3%)

Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQ 558
           E+D ++C+R   SYR LPK+Y  P  + RT L  EVLND WVS  S SED +F   +K Q
Sbjct: 546 EIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVSSKKTQ 605

Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TAL 614
           YEE ++RCED+RFELD++LE+   T + +E + +K++  + +     R+++        +
Sbjct: 606 YEEHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSAEEQAKFRLDNTLGGTSEVI 665

Query: 615 NLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKN 674
           + + ++R+Y D   D++D LRKN S+A+P++L RLK K+EEW   +  FNKVW E   K 
Sbjct: 666 HRKALQRIYADKAADIIDGLRKNPSIAVPIVLKRLKMKEEEWREAQRGFNKVWREQNEKY 725

Query: 675 YHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEF 734
           Y KSLDH+   FKQ D+K L +K+L  EI+ I ++++++     A        + PHL  
Sbjct: 726 YLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQ-----ATEENAGVPVGPHLSL 780

Query: 735 EYSDPDIHEDLYQLIKYSCGEMCTTEQLD--KVMKIWTTFLEPML 777
            Y D  I ED   LI +        ++ D  K+ +I   F+  +L
Sbjct: 781 AYEDKQILEDAAALIIHHVKRQTGIQKEDKYKIKQIMHHFIPDLL 825



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 50/103 (48%), Positives = 67/103 (65%), Gaps = 2/103 (1%)

Query: 18  MISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFK 77
           ++ S   P+     V G      Q+L   DAL+YL  VK  F  + + Y+DFL++MK+FK
Sbjct: 98  VVQSHAHPAPPVAPVQGQQQ--FQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFK 155

Query: 78  AQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLED 120
           +Q IDT GVI+RV +LFKGH DLI+GFNTFLP GY+I +   D
Sbjct: 156 SQSIDTPGVISRVSQLFKGHPDLIMGFNTFLPPGYKIEVQTND 198



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/88 (45%), Positives = 55/88 (62%), Gaps = 13/88 (14%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI-------------TEVY 173
           +PVEF  AIN+VNKIK RFQG   +YK+FL+IL+ Y+KE ++               EVY
Sbjct: 300 QPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVY 359

Query: 174 QEVEALFQDHPDLLEEFTHFLPDSSGAA 201
            +V  LF++  DLL EF  FLPD++ + 
Sbjct: 360 AQVARLFKNQEDLLSEFGQFLPDANSSV 387



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/70 (40%), Positives = 43/70 (61%), Gaps = 2/70 (2%)

Query: 343 NAMKSMFSQELSFCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPD 400
           +A K     E  F +KV+  LR  + Y+ FLRCL ++ +E+I+R+EL  LV   LG++P+
Sbjct: 455 DASKHGVGTESLFFDKVRKALRSAEAYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPE 514

Query: 401 LMDGFNGFLA 410
           L + F  FL 
Sbjct: 515 LFNWFKNFLG 524



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 9/81 (11%)

Query: 124 PPKKPVE---------FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQ 174
           PP  PV+          E+A+++++++K +F     VY  FLDI+  ++ ++     V  
Sbjct: 107 PPVAPVQGQQQFQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVIS 166

Query: 175 EVEALFQDHPDLLEEFTHFLP 195
            V  LF+ HPDL+  F  FLP
Sbjct: 167 RVSQLFKGHPDLIMGFNTFLP 187


>gi|403304969|ref|XP_003943051.1| PREDICTED: paired amphipathic helix protein Sin3a isoform 1
           [Saimiri boliviensis boliviensis]
 gi|403304971|ref|XP_003943052.1| PREDICTED: paired amphipathic helix protein Sin3a isoform 2
           [Saimiri boliviensis boliviensis]
 gi|403304973|ref|XP_003943053.1| PREDICTED: paired amphipathic helix protein Sin3a isoform 3
           [Saimiri boliviensis boliviensis]
          Length = 1273

 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 108/285 (37%), Positives = 166/285 (58%), Gaps = 11/285 (3%)

Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQ 558
           E+D ++C+R   SYR LPK+Y  P  + RT L  EVLND WVS  S SED +F   +K Q
Sbjct: 545 EIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVSSKKTQ 604

Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TAL 614
           YEE ++RCED+RFELD++LE+   T + +E + +K++  + +     R+++        +
Sbjct: 605 YEEHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSAEEQAKFRLDNTLGGTSEVI 664

Query: 615 NLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKN 674
           + + ++R+Y D   D++D LRKN S+A+P++L RLK K+EEW   +  FNKVW E   K 
Sbjct: 665 HRKALQRIYADKAADIIDGLRKNPSIAVPIVLKRLKMKEEEWREAQRGFNKVWREQNEKY 724

Query: 675 YHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEF 734
           Y KSLDH+   FKQ D+K L +K+L  EI+ I ++++++     A        + PHL  
Sbjct: 725 YLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQ-----ATEENAGVPVGPHLSL 779

Query: 735 EYSDPDIHEDLYQLIKYSCGEMCTTEQLD--KVMKIWTTFLEPML 777
            Y D  I ED   LI +        ++ D  K+ +I   F+  +L
Sbjct: 780 AYEDKQILEDAAALIIHHVKRQTGIQKEDKYKIKQIMHHFIPDLL 824



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 50/103 (48%), Positives = 67/103 (65%), Gaps = 2/103 (1%)

Query: 18  MISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFK 77
           ++ S   P+     V G      Q+L   DAL+YL  VK  F  + + Y+DFL++MK+FK
Sbjct: 98  VVQSHAHPAPPVAPVQGQQQ--FQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFK 155

Query: 78  AQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLED 120
           +Q IDT GVI+RV +LFKGH DLI+GFNTFLP GY+I +   D
Sbjct: 156 SQSIDTPGVISRVSQLFKGHPDLIMGFNTFLPPGYKIEVQTND 198



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/88 (45%), Positives = 55/88 (62%), Gaps = 13/88 (14%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI-------------TEVY 173
           +PVEF  AIN+VNKIK RFQG   +YK+FL+IL+ Y+KE ++               EVY
Sbjct: 300 QPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVY 359

Query: 174 QEVEALFQDHPDLLEEFTHFLPDSSGAA 201
            +V  LF++  DLL EF  FLPD++ + 
Sbjct: 360 AQVARLFKNQEDLLSEFGQFLPDANSSV 387



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 39/58 (67%), Gaps = 2/58 (3%)

Query: 355 FCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLA 410
           F +KV+  LR  + Y+ FLRCL ++ +E+I+R+EL  LV   LG++P+L + F  FL 
Sbjct: 466 FFDKVRKALRSAEAYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPELFNWFKNFLG 523



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 9/81 (11%)

Query: 124 PPKKPVE---------FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQ 174
           PP  PV+          E+A+++++++K +F     VY  FLDI+  ++ ++     V  
Sbjct: 107 PPVAPVQGQQQFQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVIS 166

Query: 175 EVEALFQDHPDLLEEFTHFLP 195
            V  LF+ HPDL+  F  FLP
Sbjct: 167 RVSQLFKGHPDLIMGFNTFLP 187


>gi|444730260|gb|ELW70647.1| Paired amphipathic helix protein Sin3a [Tupaia chinensis]
          Length = 1275

 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 108/285 (37%), Positives = 166/285 (58%), Gaps = 11/285 (3%)

Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQ 558
           E+D ++C+R   SYR LPK+Y  P  + RT L  EVLND WVS  S SED +F   +K Q
Sbjct: 547 EIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVSSKKTQ 606

Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TAL 614
           YEE ++RCED+RFELD++LE+   T + +E + +K++  + +     R+++        +
Sbjct: 607 YEEHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSAEEQAKFRLDNTLGGTSEVI 666

Query: 615 NLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKN 674
           + + ++R+Y D   D++D LRKN S+A+P++L RLK K+EEW   +  FNKVW E   K 
Sbjct: 667 HRKALQRIYADKAADIIDGLRKNPSIAVPIVLKRLKMKEEEWREAQRGFNKVWREQNEKY 726

Query: 675 YHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEF 734
           Y KSLDH+   FKQ D+K L +K+L  EI+ I ++++++     A        + PHL  
Sbjct: 727 YLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQ-----ATEENAGVPVGPHLSL 781

Query: 735 EYSDPDIHEDLYQLIKYSCGEMCTTEQLD--KVMKIWTTFLEPML 777
            Y D  I ED   LI +        ++ D  K+ +I   F+  +L
Sbjct: 782 AYEDKQILEDAAALIIHHVKRQTGIQKEDKYKIKQIMHHFIPDLL 826



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 49/103 (47%), Positives = 66/103 (64%), Gaps = 1/103 (0%)

Query: 18  MISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFK 77
           ++ S   P+     V G       K+   DAL+YL  VK  F  + + Y+DFL++MK+FK
Sbjct: 98  VVQSHAHPAPPVAPVQGQQQFQRLKVV-EDALSYLDQVKLQFGSQPQVYNDFLDIMKEFK 156

Query: 78  AQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLED 120
           +Q IDT GVI+RV +LFKGH DLI+GFNTFLP GY+I +   D
Sbjct: 157 SQSIDTPGVISRVSQLFKGHPDLIMGFNTFLPPGYKIEVQTND 199



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/90 (44%), Positives = 56/90 (62%), Gaps = 13/90 (14%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI-------------TEVY 173
           +PVEF  AIN+VNKIK RFQG   +YK+FL+IL+ Y+KE ++               EVY
Sbjct: 301 QPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVY 360

Query: 174 QEVEALFQDHPDLLEEFTHFLPDSSGAASI 203
            +V  LF++  DLL EF  FLPD++ +  +
Sbjct: 361 AQVARLFKNQEDLLSEFGQFLPDANSSVLL 390



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/70 (40%), Positives = 43/70 (61%), Gaps = 2/70 (2%)

Query: 343 NAMKSMFSQELSFCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPD 400
           +A K     E  F +KV+  LR  + Y+ FLRCL ++ +E+I+R+EL  LV   LG++P+
Sbjct: 456 DASKHGVGTESLFFDKVRKALRSAEAYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPE 515

Query: 401 LMDGFNGFLA 410
           L + F  FL 
Sbjct: 516 LFNWFKNFLG 525



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 10/82 (12%)

Query: 124 PPKKPVE----------FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVY 173
           PP  PV+           E+A+++++++K +F     VY  FLDI+  ++ ++     V 
Sbjct: 107 PPVAPVQGQQQFQRLKVVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVI 166

Query: 174 QEVEALFQDHPDLLEEFTHFLP 195
             V  LF+ HPDL+  F  FLP
Sbjct: 167 SRVSQLFKGHPDLIMGFNTFLP 188


>gi|297488075|ref|XP_002696677.1| PREDICTED: paired amphipathic helix protein Sin3a isoform 1 [Bos
           taurus]
 gi|358417952|ref|XP_003583795.1| PREDICTED: paired amphipathic helix protein Sin3a [Bos taurus]
 gi|358417954|ref|XP_880544.4| PREDICTED: paired amphipathic helix protein Sin3a isoform 6 [Bos
           taurus]
 gi|359077743|ref|XP_003587608.1| PREDICTED: paired amphipathic helix protein Sin3a isoform 2 [Bos
           taurus]
 gi|296475436|tpg|DAA17551.1| TPA: hypothetical protein BOS_20267 [Bos taurus]
 gi|440909312|gb|ELR59234.1| Paired amphipathic helix protein Sin3a [Bos grunniens mutus]
          Length = 1274

 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 108/285 (37%), Positives = 166/285 (58%), Gaps = 11/285 (3%)

Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQ 558
           E+D ++C+R   SYR LPK+Y  P  + RT L  EVLND WVS  S SED +F   +K Q
Sbjct: 546 EIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVSSKKTQ 605

Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TAL 614
           YEE ++RCED+RFELD++LE+   T + +E + +K++  + +     R+++        +
Sbjct: 606 YEEHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSAEEQAKFRLDNTLGGTSEVI 665

Query: 615 NLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKN 674
           + + ++R+Y D   D++D LRKN S+A+P++L RLK K+EEW   +  FNKVW E   K 
Sbjct: 666 HRKALQRIYADKAADIIDGLRKNPSIAVPIVLKRLKMKEEEWREAQRGFNKVWREQNEKY 725

Query: 675 YHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEF 734
           Y KSLDH+   FKQ D+K L +K+L  EI+ I ++++++     A        + PHL  
Sbjct: 726 YLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQ-----ATEENAGVPVGPHLSL 780

Query: 735 EYSDPDIHEDLYQLIKYSCGEMCTTEQLD--KVMKIWTTFLEPML 777
            Y D  I ED   LI +        ++ D  K+ +I   F+  +L
Sbjct: 781 AYEDKQILEDAAALIIHHVKRQTGIQKEDKYKIKQIMHHFIPDLL 825



 Score =  102 bits (253), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 50/103 (48%), Positives = 67/103 (65%), Gaps = 2/103 (1%)

Query: 18  MISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFK 77
           ++ S   P+     V G      Q+L   DAL+YL  VK  F  + + Y+DFL++MK+FK
Sbjct: 98  VVQSHAHPAPPVAPVQGQQQ--FQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFK 155

Query: 78  AQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLED 120
           +Q IDT GVI+RV +LFKGH DLI+GFNTFLP GY+I +   D
Sbjct: 156 SQSIDTPGVISRVSQLFKGHPDLIMGFNTFLPPGYKIEVQTND 198



 Score = 82.8 bits (203), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 43/98 (43%), Positives = 59/98 (60%), Gaps = 18/98 (18%)

Query: 117 PLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI------- 169
           PL++ QP     VEF  AIN+VNKIK RFQG   +YK+FL+IL+ Y+KE ++        
Sbjct: 295 PLQNNQP-----VEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNY 349

Query: 170 ------TEVYQEVEALFQDHPDLLEEFTHFLPDSSGAA 201
                  EVY +V  LF++  DLL EF  FLPD++ + 
Sbjct: 350 TPALTEQEVYAQVARLFKNQEDLLSEFGQFLPDANSSV 387



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/70 (40%), Positives = 43/70 (61%), Gaps = 2/70 (2%)

Query: 343 NAMKSMFSQELSFCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPD 400
           +A K     E  F +KV+  LR  + Y+ FLRCL ++ +E+I+R+EL  LV   LG++P+
Sbjct: 455 DASKHGVGTESLFFDKVRKALRSAEAYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPE 514

Query: 401 LMDGFNGFLA 410
           L + F  FL 
Sbjct: 515 LFNWFKNFLG 524



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 9/81 (11%)

Query: 124 PPKKPVE---------FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQ 174
           PP  PV+          E+A+++++++K +F     VY  FLDI+  ++ ++     V  
Sbjct: 107 PPVAPVQGQQQFQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVIS 166

Query: 175 EVEALFQDHPDLLEEFTHFLP 195
            V  LF+ HPDL+  F  FLP
Sbjct: 167 RVSQLFKGHPDLIMGFNTFLP 187


>gi|114658182|ref|XP_001142716.1| PREDICTED: paired amphipathic helix protein Sin3a isoform 8 [Pan
           troglodytes]
 gi|114658186|ref|XP_001142881.1| PREDICTED: paired amphipathic helix protein Sin3a isoform 10 [Pan
           troglodytes]
 gi|397496362|ref|XP_003819008.1| PREDICTED: paired amphipathic helix protein Sin3a isoform 1 [Pan
           paniscus]
 gi|397496364|ref|XP_003819009.1| PREDICTED: paired amphipathic helix protein Sin3a isoform 2 [Pan
           paniscus]
 gi|410218404|gb|JAA06421.1| SIN3 homolog A, transcription regulator [Pan troglodytes]
 gi|410257530|gb|JAA16732.1| SIN3 homolog A, transcription regulator [Pan troglodytes]
 gi|410291328|gb|JAA24264.1| SIN3 homolog A, transcription regulator [Pan troglodytes]
 gi|410349483|gb|JAA41345.1| SIN3 homolog A, transcription regulator [Pan troglodytes]
          Length = 1273

 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 108/285 (37%), Positives = 166/285 (58%), Gaps = 11/285 (3%)

Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQ 558
           E+D ++C+R   SYR LPK+Y  P  + RT L  EVLND WVS  S SED +F   +K Q
Sbjct: 545 EIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVSSKKTQ 604

Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TAL 614
           YEE ++RCED+RFELD++LE+   T + +E + +K++  + +     R+++        +
Sbjct: 605 YEEHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSAEEQAKFRLDNTLGGTSEVI 664

Query: 615 NLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKN 674
           + + ++R+Y D   D++D LRKN S+A+P++L RLK K+EEW   +  FNKVW E   K 
Sbjct: 665 HRKALQRIYADKAADIIDGLRKNPSIAVPIVLKRLKMKEEEWREAQRGFNKVWREQNEKY 724

Query: 675 YHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEF 734
           Y KSLDH+   FKQ D+K L +K+L  EI+ I ++++++     A        + PHL  
Sbjct: 725 YLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQ-----ATEENAGVPVGPHLSL 779

Query: 735 EYSDPDIHEDLYQLIKYSCGEMCTTEQLD--KVMKIWTTFLEPML 777
            Y D  I ED   LI +        ++ D  K+ +I   F+  +L
Sbjct: 780 AYEDKQILEDAAALIIHHVKRQTGIQKEDKYKIKQIMHHFIPDLL 824



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 50/103 (48%), Positives = 67/103 (65%), Gaps = 2/103 (1%)

Query: 18  MISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFK 77
           ++ S   P+     V G      Q+L   DAL+YL  VK  F  + + Y+DFL++MK+FK
Sbjct: 98  VVQSHAHPAPPVAPVQGQQQ--FQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFK 155

Query: 78  AQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLED 120
           +Q IDT GVI+RV +LFKGH DLI+GFNTFLP GY+I +   D
Sbjct: 156 SQSIDTPGVISRVSQLFKGHPDLIMGFNTFLPPGYKIEVQTND 198



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/90 (44%), Positives = 56/90 (62%), Gaps = 13/90 (14%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI-------------TEVY 173
           +PVEF  AIN+VNKIK RFQG   +YK+FL+IL+ Y+KE ++               EVY
Sbjct: 300 QPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVY 359

Query: 174 QEVEALFQDHPDLLEEFTHFLPDSSGAASI 203
            +V  LF++  DLL EF  FLPD++ +  +
Sbjct: 360 AQVARLFKNQEDLLSEFGQFLPDANSSVLL 389



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 39/58 (67%), Gaps = 2/58 (3%)

Query: 355 FCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLA 410
           F +KV+  LR  + Y+ FLRCL ++ +E+I+R+EL  LV   LG++P+L + F  FL 
Sbjct: 466 FFDKVRKALRSAEAYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPELFNWFKNFLG 523



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 9/81 (11%)

Query: 124 PPKKPVE---------FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQ 174
           PP  PV+          E+A+++++++K +F     VY  FLDI+  ++ ++     V  
Sbjct: 107 PPVAPVQGQQQFQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVIS 166

Query: 175 EVEALFQDHPDLLEEFTHFLP 195
            V  LF+ HPDL+  F  FLP
Sbjct: 167 RVSQLFKGHPDLIMGFNTFLP 187


>gi|388453621|ref|NP_001253029.1| paired amphipathic helix protein Sin3a [Macaca mulatta]
 gi|380811528|gb|AFE77639.1| paired amphipathic helix protein Sin3a [Macaca mulatta]
 gi|383410501|gb|AFH28464.1| paired amphipathic helix protein Sin3a [Macaca mulatta]
 gi|384946314|gb|AFI36762.1| paired amphipathic helix protein Sin3a [Macaca mulatta]
          Length = 1273

 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 108/285 (37%), Positives = 166/285 (58%), Gaps = 11/285 (3%)

Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQ 558
           E+D ++C+R   SYR LPK+Y  P  + RT L  EVLND WVS  S SED +F   +K Q
Sbjct: 545 EIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVSSKKTQ 604

Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TAL 614
           YEE ++RCED+RFELD++LE+   T + +E + +K++  + +     R+++        +
Sbjct: 605 YEEHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSAEEQAKFRLDNTLGGTSEVI 664

Query: 615 NLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKN 674
           + + ++R+Y D   D++D LRKN S+A+P++L RLK K+EEW   +  FNKVW E   K 
Sbjct: 665 HRKALQRIYADKAADIIDGLRKNPSIAVPIVLKRLKMKEEEWREAQRGFNKVWREQNEKY 724

Query: 675 YHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEF 734
           Y KSLDH+   FKQ D+K L +K+L  EI+ I ++++++     A        + PHL  
Sbjct: 725 YLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQ-----ATEENAGVPVGPHLSL 779

Query: 735 EYSDPDIHEDLYQLIKYSCGEMCTTEQLD--KVMKIWTTFLEPML 777
            Y D  I ED   LI +        ++ D  K+ +I   F+  +L
Sbjct: 780 AYEDKQILEDAAALIIHHVKRQTGIQKEDKYKIKQIMHHFIPDLL 824



 Score =  102 bits (253), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 50/103 (48%), Positives = 67/103 (65%), Gaps = 2/103 (1%)

Query: 18  MISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFK 77
           ++ S   P+     V G      Q+L   DAL+YL  VK  F  + + Y+DFL++MK+FK
Sbjct: 98  VVQSHAHPAPPVAPVQGQQQ--FQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFK 155

Query: 78  AQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLED 120
           +Q IDT GVI+RV +LFKGH DLI+GFNTFLP GY+I +   D
Sbjct: 156 SQSIDTPGVISRVSQLFKGHPDLIMGFNTFLPPGYKIEVQTND 198



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/88 (45%), Positives = 55/88 (62%), Gaps = 13/88 (14%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI-------------TEVY 173
           +PVEF  AIN+VNKIK RFQG   +YK+FL+IL+ Y+KE ++               EVY
Sbjct: 300 QPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVY 359

Query: 174 QEVEALFQDHPDLLEEFTHFLPDSSGAA 201
            +V  LF++  DLL EF  FLPD++ + 
Sbjct: 360 AQVARLFKNQEDLLSEFGQFLPDANSSV 387



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 39/58 (67%), Gaps = 2/58 (3%)

Query: 355 FCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLA 410
           F +KV+  LR  + Y+ FLRCL ++ +E+I+R+EL  LV   LG++P+L + F  FL 
Sbjct: 466 FFDKVRKALRSAEAYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPELFNWFKNFLG 523



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 9/81 (11%)

Query: 124 PPKKPVE---------FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQ 174
           PP  PV+          E+A+++++++K +F     VY  FLDI+  ++ ++     V  
Sbjct: 107 PPVAPVQGQQQFQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVIS 166

Query: 175 EVEALFQDHPDLLEEFTHFLP 195
            V  LF+ HPDL+  F  FLP
Sbjct: 167 RVSQLFKGHPDLIMGFNTFLP 187


>gi|148693937|gb|EDL25884.1| transcriptional regulator, SIN3A (yeast), isoform CRA_b [Mus
           musculus]
          Length = 1125

 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 108/285 (37%), Positives = 166/285 (58%), Gaps = 11/285 (3%)

Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQ 558
           E+D ++C+R   SYR LPK+Y  P  + RT L  EVLND WVS  S SED +F   +K Q
Sbjct: 554 EIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVSSKKTQ 613

Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TAL 614
           YEE ++RCED+RFELD++LE+   T + +E + +K++  + +     R+++        +
Sbjct: 614 YEEHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSAEEQAKFRLDNTLGGTSEVI 673

Query: 615 NLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKN 674
           + + ++R+Y D   D++D LRKN S+A+P++L RLK K+EEW   +  FNKVW E   K 
Sbjct: 674 HRKALQRIYADKAADIIDGLRKNPSIAVPIVLKRLKMKEEEWREAQRGFNKVWREQNEKY 733

Query: 675 YHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEF 734
           Y KSLDH+   FKQ D+K L +K+L  EI+ I ++++++     A        + PHL  
Sbjct: 734 YLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQ-----ATEENAGVPVGPHLSL 788

Query: 735 EYSDPDIHEDLYQLIKYSCGEMCTTEQLD--KVMKIWTTFLEPML 777
            Y D  I ED   LI +        ++ D  K+ +I   F+  +L
Sbjct: 789 AYEDKQILEDAAALIIHHVKRQTGIQKEDKYKIKQIMHHFIPDLL 833



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 50/103 (48%), Positives = 67/103 (65%), Gaps = 2/103 (1%)

Query: 18  MISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFK 77
           ++ S   P+     V G      Q+L   DAL+YL  VK  F  + + Y+DFL++MK+FK
Sbjct: 106 VVQSHAHPAPPVAPVQGQQQ--FQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFK 163

Query: 78  AQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLED 120
           +Q IDT GVI+RV +LFKGH DLI+GFNTFLP GY+I +   D
Sbjct: 164 SQSIDTPGVISRVSQLFKGHPDLIMGFNTFLPPGYKIEVQTND 206



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/88 (45%), Positives = 55/88 (62%), Gaps = 13/88 (14%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI-------------TEVY 173
           +PVEF  AIN+VNKIK RFQG   +YK+FL+IL+ Y+KE ++               EVY
Sbjct: 308 QPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVY 367

Query: 174 QEVEALFQDHPDLLEEFTHFLPDSSGAA 201
            +V  LF++  DLL EF  FLPD++ + 
Sbjct: 368 AQVARLFKNQEDLLSEFGQFLPDANSSV 395



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/70 (40%), Positives = 43/70 (61%), Gaps = 2/70 (2%)

Query: 343 NAMKSMFSQELSFCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPD 400
           +A K     E  F +KV+  LR  + Y+ FLRCL ++ +E+I+R+EL  LV   LG++P+
Sbjct: 463 DASKHGVGTESLFFDKVRKALRSAEAYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPE 522

Query: 401 LMDGFNGFLA 410
           L + F  FL 
Sbjct: 523 LFNWFKNFLG 532



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 9/81 (11%)

Query: 124 PPKKPVE---------FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQ 174
           PP  PV+          E+A+++++++K +F     VY  FLDI+  ++ ++     V  
Sbjct: 115 PPVAPVQGQQQFQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVIS 174

Query: 175 EVEALFQDHPDLLEEFTHFLP 195
            V  LF+ HPDL+  F  FLP
Sbjct: 175 RVSQLFKGHPDLIMGFNTFLP 195


>gi|426248274|ref|XP_004017889.1| PREDICTED: paired amphipathic helix protein Sin3a [Ovis aries]
          Length = 1274

 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 108/285 (37%), Positives = 166/285 (58%), Gaps = 11/285 (3%)

Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQ 558
           E+D ++C+R   SYR LPK+Y  P  + RT L  EVLND WVS  S SED +F   +K Q
Sbjct: 546 EIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVSSKKTQ 605

Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TAL 614
           YEE ++RCED+RFELD++LE+   T + +E + +K++  + +     R+++        +
Sbjct: 606 YEEHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSAEEQAKFRLDNTLGGTSEVI 665

Query: 615 NLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKN 674
           + + ++R+Y D   D++D LRKN S+A+P++L RLK K+EEW   +  FNKVW E   K 
Sbjct: 666 HRKALQRIYADKAADIIDGLRKNPSIAVPIVLKRLKMKEEEWREAQRGFNKVWREQNEKY 725

Query: 675 YHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEF 734
           Y KSLDH+   FKQ D+K L +K+L  EI+ I ++++++     A        + PHL  
Sbjct: 726 YLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQ-----ATEENAGVPVGPHLSL 780

Query: 735 EYSDPDIHEDLYQLIKYSCGEMCTTEQLD--KVMKIWTTFLEPML 777
            Y D  I ED   LI +        ++ D  K+ +I   F+  +L
Sbjct: 781 AYEDKQILEDAAALIIHHVKRQTGIQKEDKYKIKQIMHHFIPDLL 825



 Score =  102 bits (253), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 50/103 (48%), Positives = 67/103 (65%), Gaps = 2/103 (1%)

Query: 18  MISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFK 77
           ++ S   P+     V G      Q+L   DAL+YL  VK  F  + + Y+DFL++MK+FK
Sbjct: 98  VVQSHAHPAPPVAPVQGQQQ--FQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFK 155

Query: 78  AQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLED 120
           +Q IDT GVI+RV +LFKGH DLI+GFNTFLP GY+I +   D
Sbjct: 156 SQSIDTPGVISRVSQLFKGHPDLIMGFNTFLPPGYKIEVQTND 198



 Score = 82.8 bits (203), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 43/98 (43%), Positives = 59/98 (60%), Gaps = 18/98 (18%)

Query: 117 PLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI------- 169
           PL++ QP     VEF  AIN+VNKIK RFQG   +YK+FL+IL+ Y+KE ++        
Sbjct: 295 PLQNNQP-----VEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNY 349

Query: 170 ------TEVYQEVEALFQDHPDLLEEFTHFLPDSSGAA 201
                  EVY +V  LF++  DLL EF  FLPD++ + 
Sbjct: 350 TPALTEQEVYAQVARLFKNQEDLLSEFGQFLPDANSSV 387



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/70 (40%), Positives = 43/70 (61%), Gaps = 2/70 (2%)

Query: 343 NAMKSMFSQELSFCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPD 400
           +A K     E  F +KV+  LR  + Y+ FLRCL ++ +E+I+R+EL  LV   LG++P+
Sbjct: 455 DASKHGVGTESLFFDKVRKALRSAEAYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPE 514

Query: 401 LMDGFNGFLA 410
           L + F  FL 
Sbjct: 515 LFNWFKNFLG 524



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 9/81 (11%)

Query: 124 PPKKPVE---------FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQ 174
           PP  PV+          E+A+++++++K +F     VY  FLDI+  ++ ++     V  
Sbjct: 107 PPVAPVQGQQQFQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVIS 166

Query: 175 EVEALFQDHPDLLEEFTHFLP 195
            V  LF+ HPDL+  F  FLP
Sbjct: 167 RVSQLFKGHPDLIMGFNTFLP 187


>gi|23397666|ref|NP_056292.1| paired amphipathic helix protein Sin3a [Homo sapiens]
 gi|223941782|ref|NP_001138829.1| paired amphipathic helix protein Sin3a [Homo sapiens]
 gi|223941785|ref|NP_001138830.1| paired amphipathic helix protein Sin3a [Homo sapiens]
 gi|37999759|sp|Q96ST3.2|SIN3A_HUMAN RecName: Full=Paired amphipathic helix protein Sin3a; AltName:
           Full=Histone deacetylase complex subunit Sin3a; AltName:
           Full=Transcriptional corepressor Sin3a
 gi|187952513|gb|AAI37099.1| SIN3 homolog A, transcription regulator (yeast) [Homo sapiens]
 gi|187953437|gb|AAI37100.1| SIN3 homolog A, transcription regulator (yeast) [Homo sapiens]
          Length = 1273

 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 108/285 (37%), Positives = 166/285 (58%), Gaps = 11/285 (3%)

Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQ 558
           E+D ++C+R   SYR LPK+Y  P  + RT L  EVLND WVS  S SED +F   +K Q
Sbjct: 545 EIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVSSKKTQ 604

Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TAL 614
           YEE ++RCED+RFELD++LE+   T + +E + +K++  + +     R+++        +
Sbjct: 605 YEEHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSAEEQAKFRLDNTLGGTSEVI 664

Query: 615 NLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKN 674
           + + ++R+Y D   D++D LRKN S+A+P++L RLK K+EEW   +  FNKVW E   K 
Sbjct: 665 HRKALQRIYADKAADIIDGLRKNPSIAVPIVLKRLKMKEEEWREAQRGFNKVWREQNEKY 724

Query: 675 YHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEF 734
           Y KSLDH+   FKQ D+K L +K+L  EI+ I ++++++     A        + PHL  
Sbjct: 725 YLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQ-----ATEENAGVPVGPHLSL 779

Query: 735 EYSDPDIHEDLYQLIKYSCGEMCTTEQLD--KVMKIWTTFLEPML 777
            Y D  I ED   LI +        ++ D  K+ +I   F+  +L
Sbjct: 780 AYEDKQILEDAAALIIHHVKRQTGIQKEDKYKIKQIMHHFIPDLL 824



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 50/103 (48%), Positives = 67/103 (65%), Gaps = 2/103 (1%)

Query: 18  MISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFK 77
           ++ S   P+     V G      Q+L   DAL+YL  VK  F  + + Y+DFL++MK+FK
Sbjct: 98  VVQSHAHPAPPVAPVQGQQQ--FQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFK 155

Query: 78  AQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLED 120
           +Q IDT GVI+RV +LFKGH DLI+GFNTFLP GY+I +   D
Sbjct: 156 SQSIDTPGVISRVSQLFKGHPDLIMGFNTFLPPGYKIEVQTND 198



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/88 (45%), Positives = 55/88 (62%), Gaps = 13/88 (14%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI-------------TEVY 173
           +PVEF  AIN+VNKIK RFQG   +YK+FL+IL+ Y+KE ++               EVY
Sbjct: 300 QPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVY 359

Query: 174 QEVEALFQDHPDLLEEFTHFLPDSSGAA 201
            +V  LF++  DLL EF  FLPD++ + 
Sbjct: 360 AQVARLFKNQEDLLSEFGQFLPDANSSV 387



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 39/58 (67%), Gaps = 2/58 (3%)

Query: 355 FCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLA 410
           F +KV+  LR  + Y+ FLRCL ++ +E+I+R+EL  LV   LG++P+L + F  FL 
Sbjct: 466 FFDKVRKALRSAEAYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPELFNWFKNFLG 523



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 9/81 (11%)

Query: 124 PPKKPVE---------FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQ 174
           PP  PV+          E+A+++++++K +F     VY  FLDI+  ++ ++     V  
Sbjct: 107 PPVAPVQGQQQFQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVIS 166

Query: 175 EVEALFQDHPDLLEEFTHFLP 195
            V  LF+ HPDL+  F  FLP
Sbjct: 167 RVSQLFKGHPDLIMGFNTFLP 187


>gi|348555629|ref|XP_003463626.1| PREDICTED: paired amphipathic helix protein Sin3a [Cavia porcellus]
          Length = 1274

 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 108/285 (37%), Positives = 166/285 (58%), Gaps = 11/285 (3%)

Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQ 558
           E+D ++C+R   SYR LPK+Y  P  + RT L  EVLND WVS  S SED +F   +K Q
Sbjct: 546 EIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVSSKKTQ 605

Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TAL 614
           YEE ++RCED+RFELD++LE+   T + +E + +K++  + +     R+++        +
Sbjct: 606 YEEHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSAEEQAKFRLDNTLGGTSEVI 665

Query: 615 NLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKN 674
           + + ++R+Y D   D++D LRKN S+A+P++L RLK K+EEW   +  FNKVW E   K 
Sbjct: 666 HRKALQRIYADKAADIIDGLRKNPSIAVPIVLKRLKMKEEEWREAQRGFNKVWREQNEKY 725

Query: 675 YHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEF 734
           Y KSLDH+   FKQ D+K L +K+L  EI+ I ++++++     A        + PHL  
Sbjct: 726 YLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQ-----ATEENAGVPVGPHLSL 780

Query: 735 EYSDPDIHEDLYQLIKYSCGEMCTTEQLD--KVMKIWTTFLEPML 777
            Y D  I ED   LI +        ++ D  K+ +I   F+  +L
Sbjct: 781 AYEDKQILEDAAALIIHHVKRQTGIQKEDKYKIKQIMHHFIPDLL 825



 Score =  102 bits (253), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 50/103 (48%), Positives = 67/103 (65%), Gaps = 2/103 (1%)

Query: 18  MISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFK 77
           ++ S   P+     V G      Q+L   DAL+YL  VK  F  + + Y+DFL++MK+FK
Sbjct: 98  VVQSHAHPAPPVAPVQGQQQ--FQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFK 155

Query: 78  AQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLED 120
           +Q IDT GVI+RV +LFKGH DLI+GFNTFLP GY+I +   D
Sbjct: 156 SQSIDTPGVISRVSQLFKGHPDLIMGFNTFLPPGYKIEVQTND 198



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/88 (45%), Positives = 55/88 (62%), Gaps = 13/88 (14%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI-------------TEVY 173
           +PVEF  AIN+VNKIK RFQG   +YK+FL+IL+ Y+KE ++               EVY
Sbjct: 300 QPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVY 359

Query: 174 QEVEALFQDHPDLLEEFTHFLPDSSGAA 201
            +V  LF++  DLL EF  FLPD++ + 
Sbjct: 360 AQVARLFKNQEDLLSEFGQFLPDANSSV 387



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/70 (40%), Positives = 43/70 (61%), Gaps = 2/70 (2%)

Query: 343 NAMKSMFSQELSFCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPD 400
           +A K     E  F +KV+  LR  + Y+ FLRCL ++ +E+I+R+EL  LV   LG++P+
Sbjct: 455 DASKHGVGTESLFFDKVRKALRSAEAYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPE 514

Query: 401 LMDGFNGFLA 410
           L + F  FL 
Sbjct: 515 LFNWFKNFLG 524



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 9/81 (11%)

Query: 124 PPKKPVE---------FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQ 174
           PP  PV+          E+A+++++++K +F     VY  FLDI+  ++ ++     V  
Sbjct: 107 PPVAPVQGQQQFQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVIS 166

Query: 175 EVEALFQDHPDLLEEFTHFLP 195
            V  LF+ HPDL+  F  FLP
Sbjct: 167 RVSQLFKGHPDLIMGFNTFLP 187


>gi|383417321|gb|AFH31874.1| paired amphipathic helix protein Sin3a [Macaca mulatta]
          Length = 1268

 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 108/285 (37%), Positives = 166/285 (58%), Gaps = 11/285 (3%)

Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQ 558
           E+D ++C+R   SYR LPK+Y  P  + RT L  EVLND WVS  S SED +F   +K Q
Sbjct: 545 EIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVSSKKTQ 604

Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TAL 614
           YEE ++RCED+RFELD++LE+   T + +E + +K++  + +     R+++        +
Sbjct: 605 YEEHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSAEEQAKFRLDNTLGGTSEVI 664

Query: 615 NLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKN 674
           + + ++R+Y D   D++D LRKN S+A+P++L RLK K+EEW   +  FNKVW E   K 
Sbjct: 665 HRKALQRIYADKAADIIDGLRKNPSIAVPIVLKRLKMKEEEWREAQRGFNKVWREQNEKY 724

Query: 675 YHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEF 734
           Y KSLDH+   FKQ D+K L +K+L  EI+ I ++++++     A        + PHL  
Sbjct: 725 YLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQ-----ATEENAGVPVGPHLSL 779

Query: 735 EYSDPDIHEDLYQLIKYSCGEMCTTEQLD--KVMKIWTTFLEPML 777
            Y D  I ED   LI +        ++ D  K+ +I   F+  +L
Sbjct: 780 AYEDKQILEDAAALIIHHVKRQTGIQKEDKYKIKQIMHHFIPDLL 824



 Score =  102 bits (253), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 50/103 (48%), Positives = 67/103 (65%), Gaps = 2/103 (1%)

Query: 18  MISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFK 77
           ++ S   P+     V G      Q+L   DAL+YL  VK  F  + + Y+DFL++MK+FK
Sbjct: 98  VVQSHAHPAPPVAPVQGQQQ--FQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFK 155

Query: 78  AQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLED 120
           +Q IDT GVI+RV +LFKGH DLI+GFNTFLP GY+I +   D
Sbjct: 156 SQSIDTPGVISRVSQLFKGHPDLIMGFNTFLPPGYKIEVQTND 198



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/88 (45%), Positives = 55/88 (62%), Gaps = 13/88 (14%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI-------------TEVY 173
           +PVEF  AIN+VNKIK RFQG   +YK+FL+IL+ Y+KE ++               EVY
Sbjct: 300 QPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVY 359

Query: 174 QEVEALFQDHPDLLEEFTHFLPDSSGAA 201
            +V  LF++  DLL EF  FLPD++ + 
Sbjct: 360 AQVARLFKNQEDLLSEFGQFLPDANSSV 387



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 39/58 (67%), Gaps = 2/58 (3%)

Query: 355 FCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLA 410
           F +KV+  LR  + Y+ FLRCL ++ +E+I+R+EL  LV   LG++P+L + F  FL 
Sbjct: 466 FFDKVRKALRSAEAYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPELFNWFKNFLG 523



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 9/81 (11%)

Query: 124 PPKKPVE---------FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQ 174
           PP  PV+          E+A+++++++K +F     VY  FLDI+  ++ ++     V  
Sbjct: 107 PPVAPVQGQQQFQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVIS 166

Query: 175 EVEALFQDHPDLLEEFTHFLP 195
            V  LF+ HPDL+  F  FLP
Sbjct: 167 RVSQLFKGHPDLIMGFNTFLP 187


>gi|335292401|ref|XP_003356722.1| PREDICTED: paired amphipathic helix protein Sin3a-like isoform 1
           [Sus scrofa]
 gi|350586828|ref|XP_003482286.1| PREDICTED: paired amphipathic helix protein Sin3a-like isoform 2
           [Sus scrofa]
          Length = 1274

 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 108/285 (37%), Positives = 166/285 (58%), Gaps = 11/285 (3%)

Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQ 558
           E+D ++C+R   SYR LPK+Y  P  + RT L  EVLND WVS  S SED +F   +K Q
Sbjct: 546 EIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVSSKKTQ 605

Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TAL 614
           YEE ++RCED+RFELD++LE+   T + +E + +K++  + +     R+++        +
Sbjct: 606 YEEHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSAEEQAKFRLDNTLGGTSEVI 665

Query: 615 NLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKN 674
           + + ++R+Y D   D++D LRKN S+A+P++L RLK K+EEW   +  FNKVW E   K 
Sbjct: 666 HRKALQRIYADKAADIIDGLRKNPSIAVPIVLKRLKMKEEEWREAQRGFNKVWREQNEKY 725

Query: 675 YHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEF 734
           Y KSLDH+   FKQ D+K L +K+L  EI+ I ++++++     A        + PHL  
Sbjct: 726 YLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQ-----ATEENAGVPVGPHLSL 780

Query: 735 EYSDPDIHEDLYQLIKYSCGEMCTTEQLD--KVMKIWTTFLEPML 777
            Y D  I ED   LI +        ++ D  K+ +I   F+  +L
Sbjct: 781 AYEDKQILEDAAALIIHHVKRQTGIQKEDKYKIKQIMHHFIPDLL 825



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 50/103 (48%), Positives = 67/103 (65%), Gaps = 2/103 (1%)

Query: 18  MISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFK 77
           ++ S   P+     V G      Q+L   DAL+YL  VK  F  + + Y+DFL++MK+FK
Sbjct: 98  VVQSHAHPAPPVAPVQGQQQ--FQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFK 155

Query: 78  AQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLED 120
           +Q IDT GVI+RV +LFKGH DLI+GFNTFLP GY+I +   D
Sbjct: 156 SQSIDTPGVISRVSQLFKGHPDLIMGFNTFLPPGYKIEVQTND 198



 Score = 82.8 bits (203), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 43/98 (43%), Positives = 59/98 (60%), Gaps = 18/98 (18%)

Query: 117 PLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI------- 169
           PL++ QP     VEF  AIN+VNKIK RFQG   +YK+FL+IL+ Y+KE ++        
Sbjct: 295 PLQNNQP-----VEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNY 349

Query: 170 ------TEVYQEVEALFQDHPDLLEEFTHFLPDSSGAA 201
                  EVY +V  LF++  DLL EF  FLPD++ + 
Sbjct: 350 TPALTEQEVYAQVARLFKNQEDLLSEFGQFLPDANSSV 387



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/70 (40%), Positives = 43/70 (61%), Gaps = 2/70 (2%)

Query: 343 NAMKSMFSQELSFCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPD 400
           +A K     E  F +KV+  LR  + Y+ FLRCL ++ +E+I+R+EL  LV   LG++P+
Sbjct: 455 DASKHGVGTESLFFDKVRKALRSTEAYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPE 514

Query: 401 LMDGFNGFLA 410
           L + F  FL 
Sbjct: 515 LFNWFKNFLG 524



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 9/81 (11%)

Query: 124 PPKKPVE---------FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQ 174
           PP  PV+          E+A+++++++K +F     VY  FLDI+  ++ ++     V  
Sbjct: 107 PPVAPVQGQQQFQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVIS 166

Query: 175 EVEALFQDHPDLLEEFTHFLP 195
            V  LF+ HPDL+  F  FLP
Sbjct: 167 RVSQLFKGHPDLIMGFNTFLP 187


>gi|301779519|ref|XP_002925175.1| PREDICTED: paired amphipathic helix protein Sin3a-like [Ailuropoda
           melanoleuca]
 gi|281343399|gb|EFB18983.1| hypothetical protein PANDA_014619 [Ailuropoda melanoleuca]
          Length = 1274

 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 109/288 (37%), Positives = 168/288 (58%), Gaps = 17/288 (5%)

Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQ 558
           E+D ++C+R   SYR LPK+Y  P  + RT L  EVLND WVS  S SED +F   +K Q
Sbjct: 546 EIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVSSKKTQ 605

Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TAL 614
           YEE ++RCED+RFELD++LE+   T + +E + +K++  + +     R+++        +
Sbjct: 606 YEEHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSAEEQAKFRLDNTLGGTSEVI 665

Query: 615 NLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKN 674
           + + ++R+Y D   D++D LRKN S+A+P++L RLK K+EEW   +  FNKVW E   K 
Sbjct: 666 HRKALQRIYADKAADIIDGLRKNPSIAVPIVLKRLKMKEEEWREAQRGFNKVWREQNEKY 725

Query: 675 YHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRK---EDDVLLAIAAGNRRSIVPH 731
           Y KSLDH+   FKQ D+K L +K+L  EI+ I +++++   ED+  + +         PH
Sbjct: 726 YLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQATEDNAGVPVG--------PH 777

Query: 732 LEFEYSDPDIHEDLYQLIKYSCGEMCTTEQLD--KVMKIWTTFLEPML 777
           L   Y D  I ED   LI +        ++ D  K+ +I   F+  +L
Sbjct: 778 LSLAYEDKQILEDAAALIIHHVKRQTGIQKEDKYKIKQIMHHFIPDLL 825



 Score =  102 bits (253), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 50/103 (48%), Positives = 67/103 (65%), Gaps = 2/103 (1%)

Query: 18  MISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFK 77
           ++ S   P+     V G      Q+L   DAL+YL  VK  F  + + Y+DFL++MK+FK
Sbjct: 98  VVQSHAHPTPPVAPVQGQQQ--FQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFK 155

Query: 78  AQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLED 120
           +Q IDT GVI+RV +LFKGH DLI+GFNTFLP GY+I +   D
Sbjct: 156 SQSIDTPGVISRVSQLFKGHPDLIMGFNTFLPPGYKIEVQTND 198



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/88 (45%), Positives = 55/88 (62%), Gaps = 13/88 (14%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI-------------TEVY 173
           +PVEF  AIN+VNKIK RFQG   +YK+FL+IL+ Y+KE ++               EVY
Sbjct: 300 QPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVY 359

Query: 174 QEVEALFQDHPDLLEEFTHFLPDSSGAA 201
            +V  LF++  DLL EF  FLPD++ + 
Sbjct: 360 AQVARLFKNQEDLLSEFGQFLPDANSSV 387



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/70 (40%), Positives = 43/70 (61%), Gaps = 2/70 (2%)

Query: 343 NAMKSMFSQELSFCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPD 400
           +A K     E  F +KV+  LR  + Y+ FLRCL ++ +E+I+R+EL  LV   LG++P+
Sbjct: 455 DASKHGVGTESLFFDKVRKALRSAEAYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPE 514

Query: 401 LMDGFNGFLA 410
           L + F  FL 
Sbjct: 515 LFNWFKNFLG 524



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 9/81 (11%)

Query: 124 PPKKPVE---------FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQ 174
           PP  PV+          E+A+++++++K +F     VY  FLDI+  ++ ++     V  
Sbjct: 107 PPVAPVQGQQQFQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVIS 166

Query: 175 EVEALFQDHPDLLEEFTHFLP 195
            V  LF+ HPDL+  F  FLP
Sbjct: 167 RVSQLFKGHPDLIMGFNTFLP 187


>gi|261858160|dbj|BAI45602.1| SIN3 homolog A, transcription regulator [synthetic construct]
          Length = 1273

 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 108/285 (37%), Positives = 166/285 (58%), Gaps = 11/285 (3%)

Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQ 558
           E+D ++C+R   SYR LPK+Y  P  + RT L  EVLND WVS  S SED +F   +K Q
Sbjct: 545 EIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVSSKKTQ 604

Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TAL 614
           YEE ++RCED+RFELD++LE+   T + +E + +K++  + +     R+++        +
Sbjct: 605 YEEHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSAEEQAKFRLDNTLGGTSEVI 664

Query: 615 NLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKN 674
           + + ++R+Y D   D++D LRKN S+A+P++L RLK K+EEW   +  FNKVW E   K 
Sbjct: 665 HRKALQRIYADKAADIIDGLRKNPSIAVPIVLKRLKMKEEEWREAQRGFNKVWREQNEKY 724

Query: 675 YHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEF 734
           Y KSLDH+   FKQ D+K L +K+L  EI+ I ++++++     A        + PHL  
Sbjct: 725 YLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQ-----ATEENAGVPVGPHLSL 779

Query: 735 EYSDPDIHEDLYQLIKYSCGEMCTTEQLD--KVMKIWTTFLEPML 777
            Y D  I ED   LI +        ++ D  K+ +I   F+  +L
Sbjct: 780 AYEDKQILEDAAALIIHHVKRQTGIQKEDKYKIKQIMHHFIPDLL 824



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 47/85 (55%), Positives = 61/85 (71%)

Query: 36  GGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFK 95
           G    Q+L   DAL+YL  VK  F  + + Y+DFL++MK+FK+Q IDT GVI+RV +LFK
Sbjct: 114 GQQQFQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFK 173

Query: 96  GHRDLILGFNTFLPKGYEITLPLED 120
           GH DLI+GFNTFLP GY+I +   D
Sbjct: 174 GHPDLIMGFNTFLPPGYKIEVQTND 198



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/90 (44%), Positives = 56/90 (62%), Gaps = 13/90 (14%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI-------------TEVY 173
           +PVEF  AIN+VNKIK RFQG   +YK+FL+IL+ Y+KE ++               EVY
Sbjct: 300 QPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVY 359

Query: 174 QEVEALFQDHPDLLEEFTHFLPDSSGAASI 203
            +V  LF++  DLL EF  FLPD++ +  +
Sbjct: 360 AQVARLFKNQEDLLSEFGQFLPDANSSVLL 389



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 39/58 (67%), Gaps = 2/58 (3%)

Query: 355 FCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLA 410
           F +KV+  LR  + Y+ FLRCL ++ +E+I+R+EL  LV   LG++P+L + F  FL 
Sbjct: 466 FFDKVRKALRSAEAYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPELFNWFKNFLG 523



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 40/67 (59%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           ++ E+A+++++++K +F     VY  FLDI+  ++ ++     V   V  LF+ HPDL+ 
Sbjct: 121 LKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIM 180

Query: 189 EFTHFLP 195
            F  FLP
Sbjct: 181 GFNTFLP 187


>gi|355778200|gb|EHH63236.1| Transcriptional corepressor Sin3a [Macaca fascicularis]
          Length = 1215

 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 108/285 (37%), Positives = 166/285 (58%), Gaps = 11/285 (3%)

Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQ 558
           E+D ++C+R   SYR LPK+Y  P  + RT L  EVLND WVS  S SED +F   +K Q
Sbjct: 545 EIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVSSKKTQ 604

Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TAL 614
           YEE ++RCED+RFELD++LE+   T + +E + +K++  + +     R+++        +
Sbjct: 605 YEEHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSAEEQAKFRLDNTLGGTSEVI 664

Query: 615 NLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKN 674
           + + ++R+Y D   D++D LRKN S+A+P++L RLK K+EEW   +  FNKVW E   K 
Sbjct: 665 HRKALQRIYADKAADIIDGLRKNPSIAVPIVLKRLKMKEEEWREAQRGFNKVWREQNEKY 724

Query: 675 YHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEF 734
           Y KSLDH+   FKQ D+K L +K+L  EI+ I ++++++     A        + PHL  
Sbjct: 725 YLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQ-----ATEENAGVPVGPHLSL 779

Query: 735 EYSDPDIHEDLYQLIKYSCGEMCTTEQLD--KVMKIWTTFLEPML 777
            Y D  I ED   LI +        ++ D  K+ +I   F+  +L
Sbjct: 780 AYEDKQILEDAAALIIHHVKRQTGIQKEDKYKIKQIMHHFIPDLL 824



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 50/103 (48%), Positives = 67/103 (65%), Gaps = 2/103 (1%)

Query: 18  MISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFK 77
           ++ S   P+     V G      Q+L   DAL+YL  VK  F  + + Y+DFL++MK+FK
Sbjct: 98  VVQSHAHPAPPVAPVQGQQQ--FQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFK 155

Query: 78  AQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLED 120
           +Q IDT GVI+RV +LFKGH DLI+GFNTFLP GY+I +   D
Sbjct: 156 SQSIDTPGVISRVSQLFKGHPDLIMGFNTFLPPGYKIEVQTND 198



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/88 (45%), Positives = 55/88 (62%), Gaps = 13/88 (14%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI-------------TEVY 173
           +PVEF  AIN+VNKIK RFQG   +YK+FL+IL+ Y+KE ++               EVY
Sbjct: 300 QPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVY 359

Query: 174 QEVEALFQDHPDLLEEFTHFLPDSSGAA 201
            +V  LF++  DLL EF  FLPD++ + 
Sbjct: 360 AQVARLFKNQEDLLSEFGQFLPDANSSV 387



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/61 (42%), Positives = 40/61 (65%), Gaps = 2/61 (3%)

Query: 355 FCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLARC 412
           F +KV+  LR  + Y+ FLRCL ++ +E+I+R+EL  LV   LG++P+L + F  FL   
Sbjct: 466 FFDKVRKALRSAEAYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPELFNWFKNFLGYK 525

Query: 413 E 413
           E
Sbjct: 526 E 526



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 9/81 (11%)

Query: 124 PPKKPVE---------FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQ 174
           PP  PV+          E+A+++++++K +F     VY  FLDI+  ++ ++     V  
Sbjct: 107 PPVAPVQGQQQFQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVIS 166

Query: 175 EVEALFQDHPDLLEEFTHFLP 195
            V  LF+ HPDL+  F  FLP
Sbjct: 167 RVSQLFKGHPDLIMGFNTFLP 187


>gi|395822857|ref|XP_003784723.1| PREDICTED: paired amphipathic helix protein Sin3a [Otolemur
           garnettii]
          Length = 1243

 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 108/285 (37%), Positives = 166/285 (58%), Gaps = 11/285 (3%)

Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQ 558
           E+D ++C+R   SYR LPK+Y  P  + RT L  EVLND WVS  S SED +F   +K Q
Sbjct: 546 EIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVSSKKTQ 605

Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TAL 614
           YEE ++RCED+RFELD++LE+   T + +E + +K++  + +     R+++        +
Sbjct: 606 YEEHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSAEEQAKFRLDNTLGGTSEVI 665

Query: 615 NLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKN 674
           + + ++R+Y D   D++D LRKN S+A+P++L RLK K+EEW   +  FNKVW E   K 
Sbjct: 666 HRKALQRIYADKAADIIDGLRKNPSIAVPIVLKRLKMKEEEWREAQRGFNKVWREQNEKY 725

Query: 675 YHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEF 734
           Y KSLDH+   FKQ D+K L +K+L  EI+ I ++++++     A        + PHL  
Sbjct: 726 YLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQ-----ATEENAGVPVGPHLSL 780

Query: 735 EYSDPDIHEDLYQLIKYSCGEMCTTEQLD--KVMKIWTTFLEPML 777
            Y D  I ED   LI +        ++ D  K+ +I   F+  +L
Sbjct: 781 AYEDKQILEDAAALIIHHVKRQTGIQKEDKYKIKQIMHHFIPDLL 825



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 50/103 (48%), Positives = 67/103 (65%), Gaps = 2/103 (1%)

Query: 18  MISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFK 77
           ++ S   P+     V G      Q+L   DAL+YL  VK  F  + + Y+DFL++MK+FK
Sbjct: 98  VVQSHAHPAPPVAPVQGQQQ--FQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFK 155

Query: 78  AQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLED 120
           +Q IDT GVI+RV +LFKGH DLI+GFNTFLP GY+I +   D
Sbjct: 156 SQSIDTPGVISRVSQLFKGHPDLIMGFNTFLPPGYKIEVQTND 198



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/88 (45%), Positives = 55/88 (62%), Gaps = 13/88 (14%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI-------------TEVY 173
           +PVEF  AIN+VNKIK RFQG   +YK+FL+IL+ Y+KE ++               EVY
Sbjct: 300 QPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVY 359

Query: 174 QEVEALFQDHPDLLEEFTHFLPDSSGAA 201
            +V  LF++  DLL EF  FLPD++ + 
Sbjct: 360 AQVARLFKNQEDLLSEFGQFLPDANSSV 387



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/70 (40%), Positives = 43/70 (61%), Gaps = 2/70 (2%)

Query: 343 NAMKSMFSQELSFCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPD 400
           +A K     E  F +KV+  LR  + Y+ FLRCL ++ +E+I+R+EL  LV   LG++P+
Sbjct: 455 DASKHGVGTESLFFDKVRKALRSTEAYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPE 514

Query: 401 LMDGFNGFLA 410
           L + F  FL 
Sbjct: 515 LFNWFKNFLG 524



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 9/81 (11%)

Query: 124 PPKKPVE---------FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQ 174
           PP  PV+          E+A+++++++K +F     VY  FLDI+  ++ ++     V  
Sbjct: 107 PPVAPVQGQQQFQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVIS 166

Query: 175 EVEALFQDHPDLLEEFTHFLP 195
            V  LF+ HPDL+  F  FLP
Sbjct: 167 RVSQLFKGHPDLIMGFNTFLP 187


>gi|149691768|ref|XP_001491398.1| PREDICTED: paired amphipathic helix protein Sin3a [Equus caballus]
          Length = 1274

 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 109/288 (37%), Positives = 168/288 (58%), Gaps = 17/288 (5%)

Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQ 558
           E+D ++C+R   SYR LPK+Y  P  + RT L  EVLND WVS  S SED +F   +K Q
Sbjct: 546 EIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVSSKKTQ 605

Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TAL 614
           YEE ++RCED+RFELD++LE+   T + +E + +K++  + +     R+++        +
Sbjct: 606 YEEHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSAEEQAKFRLDNTLGGTSEVI 665

Query: 615 NLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKN 674
           + + ++R+Y D   D++D LRKN S+A+P++L RLK K+EEW   +  FNKVW E   K 
Sbjct: 666 HRKALQRIYADKAADIIDGLRKNPSIAVPIVLKRLKMKEEEWREAQRGFNKVWREQNEKY 725

Query: 675 YHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRK---EDDVLLAIAAGNRRSIVPH 731
           Y KSLDH+   FKQ D+K L +K+L  EI+ I +++++   ED+  + +         PH
Sbjct: 726 YLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQATEDNAGVPVG--------PH 777

Query: 732 LEFEYSDPDIHEDLYQLIKYSCGEMCTTEQLD--KVMKIWTTFLEPML 777
           L   Y D  I ED   LI +        ++ D  K+ +I   F+  +L
Sbjct: 778 LSLAYEDKQILEDAAALIIHHVKRQTGIQKEDKYKIKQIMHHFIPDLL 825



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 50/103 (48%), Positives = 67/103 (65%), Gaps = 2/103 (1%)

Query: 18  MISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFK 77
           ++ S   P+     V G      Q+L   DAL+YL  VK  F  + + Y+DFL++MK+FK
Sbjct: 98  VVQSHAHPAPPVAPVQGQQQ--FQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFK 155

Query: 78  AQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLED 120
           +Q IDT GVI+RV +LFKGH DLI+GFNTFLP GY+I +   D
Sbjct: 156 SQSIDTPGVISRVSQLFKGHPDLIMGFNTFLPPGYKIEVQTND 198



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/88 (45%), Positives = 55/88 (62%), Gaps = 13/88 (14%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI-------------TEVY 173
           +PVEF  AIN+VNKIK RFQG   +YK+FL+IL+ Y+KE ++               EVY
Sbjct: 300 QPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVY 359

Query: 174 QEVEALFQDHPDLLEEFTHFLPDSSGAA 201
            +V  LF++  DLL EF  FLPD++ + 
Sbjct: 360 AQVARLFKNQEDLLSEFGQFLPDANSSV 387



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/70 (40%), Positives = 43/70 (61%), Gaps = 2/70 (2%)

Query: 343 NAMKSMFSQELSFCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPD 400
           +A K     E  F +KV+  LR  + Y+ FLRCL ++ +E+I+R+EL  LV   LG++P+
Sbjct: 455 DASKHGVGTESLFFDKVRKALRSAEAYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPE 514

Query: 401 LMDGFNGFLA 410
           L + F  FL 
Sbjct: 515 LFNWFKNFLG 524



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 9/81 (11%)

Query: 124 PPKKPVE---------FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQ 174
           PP  PV+          E+A+++++++K +F     VY  FLDI+  ++ ++     V  
Sbjct: 107 PPVAPVQGQQQFQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVIS 166

Query: 175 EVEALFQDHPDLLEEFTHFLP 195
            V  LF+ HPDL+  F  FLP
Sbjct: 167 RVSQLFKGHPDLIMGFNTFLP 187


>gi|60359996|dbj|BAD90217.1| mKIAA4126 protein [Mus musculus]
          Length = 1285

 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 108/285 (37%), Positives = 166/285 (58%), Gaps = 11/285 (3%)

Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQ 558
           E+D ++C+R   SYR LPK+Y  P  + RT L  EVLND WVS  S SED +F   +K Q
Sbjct: 554 EIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVSSKKTQ 613

Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TAL 614
           YEE ++RCED+RFELD++LE+   T + +E + +K++  + +     R+++        +
Sbjct: 614 YEEHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSAEEQAKFRLDNTLGGTSEVI 673

Query: 615 NLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKN 674
           + + ++R+Y D   D++D LRKN S+A+P++L RLK K+EEW   +  FNKVW E   K 
Sbjct: 674 HRKALQRIYADKAADIIDGLRKNPSIAVPIVLKRLKMKEEEWREAQRGFNKVWREQNEKY 733

Query: 675 YHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEF 734
           Y KSLDH+   FKQ D+K L +K+L  EI+ I ++++++     A        + PHL  
Sbjct: 734 YLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQ-----ATEENAGVPVGPHLSL 788

Query: 735 EYSDPDIHEDLYQLIKYSCGEMCTTEQLD--KVMKIWTTFLEPML 777
            Y D  I ED   LI +        ++ D  K+ +I   F+  +L
Sbjct: 789 AYEDKQILEDAAALIIHHVKRQTGIQKEDKYKIKQIMHHFIPDLL 833



 Score =  102 bits (253), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 50/103 (48%), Positives = 67/103 (65%), Gaps = 2/103 (1%)

Query: 18  MISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFK 77
           ++ S   P+     V G      Q+L   DAL+YL  VK  F  + + Y+DFL++MK+FK
Sbjct: 106 VVQSHAHPAPPVAPVQGQQQ--FQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFK 163

Query: 78  AQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLED 120
           +Q IDT GVI+RV +LFKGH DLI+GFNTFLP GY+I +   D
Sbjct: 164 SQSIDTPGVISRVSQLFKGHPDLIMGFNTFLPPGYKIEVQTND 206



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/88 (45%), Positives = 55/88 (62%), Gaps = 13/88 (14%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI-------------TEVY 173
           +PVEF  AIN+VNKIK RFQG   +YK+FL+IL+ Y+KE ++               EVY
Sbjct: 308 QPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVY 367

Query: 174 QEVEALFQDHPDLLEEFTHFLPDSSGAA 201
            +V  LF++  DLL EF  FLPD++ + 
Sbjct: 368 AQVARLFKNQEDLLSEFGQFLPDANSSV 395



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/70 (40%), Positives = 43/70 (61%), Gaps = 2/70 (2%)

Query: 343 NAMKSMFSQELSFCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPD 400
           +A K     E  F +KV+  LR  + Y+ FLRCL ++ +E+I+R+EL  LV   LG++P+
Sbjct: 463 DASKHGVGTESLFFDKVRKALRSAEAYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPE 522

Query: 401 LMDGFNGFLA 410
           L + F  FL 
Sbjct: 523 LFNWFKNFLG 532



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 9/81 (11%)

Query: 124 PPKKPVE---------FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQ 174
           PP  PV+          E+A+++++++K +F     VY  FLDI+  ++ ++     V  
Sbjct: 115 PPVAPVQGQQQFQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVIS 174

Query: 175 EVEALFQDHPDLLEEFTHFLP 195
            V  LF+ HPDL+  F  FLP
Sbjct: 175 RVSQLFKGHPDLIMGFNTFLP 195


>gi|209875575|ref|XP_002139230.1| transcriptional regulatory protein SIN3 [Cryptosporidium muris
           RN66]
 gi|209554836|gb|EEA04881.1| transcriptional regulatory protein SIN3, putative [Cryptosporidium
           muris RN66]
          Length = 1365

 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 108/296 (36%), Positives = 167/296 (56%), Gaps = 32/296 (10%)

Query: 489 KDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSED 548
           K  Y      +LD S C R   SY  LP +Y I   + R +   + LND+WVS+  GSED
Sbjct: 339 KYSYFCCNFAQLDYSKCARNGNSYLHLPDDYPIAICTGRIDSDRQNLNDNWVSIPQGSED 398

Query: 549 YSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVE 608
           +SFKHMRKN YEE+LF+CED+RFELDM++E+   T   +E + E+I+  +I+     +++
Sbjct: 399 FSFKHMRKNVYEENLFKCEDERFELDMVIENNRSTIHILEPIAEQISKLSIEEKKRFKLK 458

Query: 609 D-HFTALNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNK-V 666
           +  F+ ++L+ I R+YGD+G +++++L+++    +PVIL RLKQK EEW   R   N+ V
Sbjct: 459 NPPFSIIHLKAISRIYGDNGSEILELLKRSPYSCIPVILNRLKQKDEEWTHARHLMNQGV 518

Query: 667 WAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKR--------------- 711
           W +I +KNY KS DHRSFYF+Q D K+   K   +E+ ++  ++R               
Sbjct: 519 WRDIQTKNYFKSFDHRSFYFRQSDKKNTNVKGFLSEVSKLYLQRRGFDLGTSSPCTTVIP 578

Query: 712 -KEDDVLLAIAAGNRR--------------SIVPHLEFEYSDPDIHEDLYQLIKYS 752
            K  D    I +  R               SI P      SD ++H+++ +LI ++
Sbjct: 579 PKSIDSTSPITSSERYQNISTTYRKESNGWSIAPEFAHTMSDIEVHKEVIELISFT 634



 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 13/149 (8%)

Query: 51  YLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPK 110
           YL  ++    +  E Y +FL +M+DFK   I+   VI++V ELFKG+  LI  FN FLP+
Sbjct: 7   YLSRLRSRCGEDTELYQEFLRIMRDFKHGNINARVVISQVAELFKGNSGLIAEFNNFLPE 66

Query: 111 GYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSIT 170
              + +P  D           E A  ++ K+K   +    +Y  FL +L+ Y++  K+ +
Sbjct: 67  ELRLQVPQTD----------CEYAATYIKKVK---ELAPDIYADFLTLLSKYQEGEKTAS 113

Query: 171 EVYQEVEALFQDHPDLLEEFTHFLPDSSG 199
           EV  +V +L   +PDLL EF  FLP+ S 
Sbjct: 114 EVKNKVTSLLSSYPDLLREFALFLPELSS 142


>gi|441617238|ref|XP_003281866.2| PREDICTED: LOW QUALITY PROTEIN: paired amphipathic helix protein
           Sin3a [Nomascus leucogenys]
          Length = 1243

 Score =  194 bits (494), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 108/285 (37%), Positives = 166/285 (58%), Gaps = 11/285 (3%)

Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQ 558
           E+D ++C+R   SYR LPK+Y  P  + RT L  EVLND WVS  S SED +F   +K Q
Sbjct: 515 EIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVSSKKTQ 574

Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TAL 614
           YEE ++RCED+RFELD++LE+   T + +E + +K++  + +     R+++        +
Sbjct: 575 YEEHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSAEEQAKFRLDNTLGGTSEVI 634

Query: 615 NLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKN 674
           + + ++R+Y D   D++D LRKN S+A+P++L RLK K+EEW   +  FNKVW E   K 
Sbjct: 635 HRKALQRIYADKAADIIDGLRKNPSIAVPIVLKRLKMKEEEWREAQRGFNKVWREQNEKY 694

Query: 675 YHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEF 734
           Y KSLDH+   FKQ D+K L +K+L  EI+ I ++++++     A        + PHL  
Sbjct: 695 YLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQ-----ATEENAGVPVGPHLSL 749

Query: 735 EYSDPDIHEDLYQLIKYSCGEMCTTEQLD--KVMKIWTTFLEPML 777
            Y D  I ED   LI +        ++ D  K+ +I   F+  +L
Sbjct: 750 AYEDKQILEDAAALIIHHVKRQTGIQKEDKYKIKQIMHHFIPDLL 794



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 50/103 (48%), Positives = 67/103 (65%), Gaps = 2/103 (1%)

Query: 18  MISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFK 77
           ++ S   P+     V G      Q+L   DAL+YL  VK  F  + + Y+DFL++MK+FK
Sbjct: 98  VVQSHAHPAPPVAPVQGQQQ--FQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFK 155

Query: 78  AQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLED 120
           +Q IDT GVI+RV +LFKGH DLI+GFNTFLP GY+I +   D
Sbjct: 156 SQSIDTPGVISRVSQLFKGHPDLIMGFNTFLPPGYKIEVQTND 198



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 29/75 (38%), Positives = 42/75 (56%), Gaps = 17/75 (22%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDL 186
           +PVEF  AIN+VNKIK RFQG   +YK+FL+IL+ Y+   + I                 
Sbjct: 300 QPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQVRRRKI----------------- 342

Query: 187 LEEFTHFLPDSSGAA 201
           + EF  F+PD++ + 
Sbjct: 343 VSEFGQFIPDANSSV 357



 Score = 58.2 bits (139), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 39/58 (67%), Gaps = 2/58 (3%)

Query: 355 FCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLA 410
           F +KV+  +R  + Y+ FLRCL ++ +E+I+R+EL  LV   LG++P+L + F  FL 
Sbjct: 436 FFDKVRKAIRSAEAYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPELFNWFKNFLG 493



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 9/81 (11%)

Query: 124 PPKKPVE---------FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQ 174
           PP  PV+          E+A+++++++K +F     VY  FLDI+  ++ ++     V  
Sbjct: 107 PPVAPVQGQQQFQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVIS 166

Query: 175 EVEALFQDHPDLLEEFTHFLP 195
            V  LF+ HPDL+  F  FLP
Sbjct: 167 RVSQLFKGHPDLIMGFNTFLP 187


>gi|134025849|gb|AAI34820.1| LOC443643 protein [Xenopus laevis]
          Length = 781

 Score =  194 bits (494), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 110/283 (38%), Positives = 166/283 (58%), Gaps = 13/283 (4%)

Query: 498 QELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKN 557
           +E+D ++C+R   SYR LPK++  P  S RT L  EVLND WVS  S SED +F   +K 
Sbjct: 387 REIDYASCKRIGSSYRALPKSFPHPKCSGRTALCKEVLNDTWVSFPSWSEDSTFVSSKKT 446

Query: 558 QYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TA 613
            YEE L RCED+RFELD++LE+   T + +E + +K++  + +     R++D        
Sbjct: 447 PYEEQLHRCEDERFELDVVLETNLATIRVLESVQKKLSRMSPEDQEKFRLDDRLGGTSEV 506

Query: 614 LNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSK 673
           +  R I R+YGD   D+++ L+KN   A+PV+L RLK K+EEW   +  FNK+W E Y +
Sbjct: 507 IQRRAIYRIYGDKAPDIVESLKKNPVTAVPVVLKRLKAKEEEWREAQRGFNKIWREQYER 566

Query: 674 NYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEIS-EKKRKEDDVLLAIAAGNRRSIVPHL 732
            Y KSLDH++  FKQ D+K+L +K+L  EI+ +  E++ ++ D     ++G      PHL
Sbjct: 567 AYLKSLDHQAVNFKQNDTKALRSKSLLNEIESVYDERQEQQPDGRTTTSSG------PHL 620

Query: 733 EFEYSDPDIHEDLYQLIKYSCGEMCTTEQLDK--VMKIWTTFL 773
            + Y D  I ED   LI +      T ++ DK  + ++   FL
Sbjct: 621 IYTYEDWQILEDAAALITFYVSRQPTIQKEDKDTIWQVLHQFL 663



 Score =  135 bits (341), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 89/240 (37%), Positives = 111/240 (46%), Gaps = 74/240 (30%)

Query: 32  VGGGGGGGAQKLTTN-------------DALAYLKAVKDIFQDKREKYDDFLEVMKDFKA 78
           +  GGGGG  K   N             DAL+YL  VK  F      Y  FLE+MK+FK+
Sbjct: 1   MASGGGGGNCKPNPNWSKPQEKLPVHVEDALSYLDQVKIRFGSDPATYSGFLEIMKEFKS 60

Query: 79  QRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLP--------------------- 117
           Q IDT GVI RV +LF  H DL+LGFN FLP GY+I LP                     
Sbjct: 61  QSIDTPGVIRRVSQLFHEHPDLMLGFNAFLPLGYKIELPKNGKVVVQTTLSSPVSSDATT 120

Query: 118 -----------------------------LEDEQPPPKK-PVEFEEAINFVNKIKTRFQG 147
                                         E  QPPP+   +EF  AI++VNKIKTRF  
Sbjct: 121 SSLSSSRVIVPPVPENVLSEVPQESRQQEKEKPQPPPESDSLEFHNAISYVNKIKTRFLD 180

Query: 148 DDHVYKSFLDILNMYRKEN----------KSITEVYQEVEALFQDHPDLLEEFTHFLPDS 197
              +Y+SFL+IL+ Y+K+            S  EV+ EV +LF    DLL EF  FLP++
Sbjct: 181 RPEIYRSFLEILHTYQKDQLNPKGRPFRGMSEEEVFTEVASLFHGQEDLLSEFGQFLPEA 240



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 26/62 (41%), Positives = 38/62 (61%), Gaps = 2/62 (3%)

Query: 351 QELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGF 408
           QE SF  KV+  L+    Y+ FLRC+ L+ +E+++ SEL  LV   LG++P+L   F  F
Sbjct: 305 QEFSFFNKVRRVLKSQEVYENFLRCIALFNQELVSGSELLQLVTPFLGKFPELFAQFKSF 364

Query: 409 LA 410
           L 
Sbjct: 365 LG 366


>gi|326926424|ref|XP_003209400.1| PREDICTED: paired amphipathic helix protein Sin3a-like [Meleagris
           gallopavo]
          Length = 1261

 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 110/288 (38%), Positives = 168/288 (58%), Gaps = 17/288 (5%)

Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQ 558
           E+D ++C+R   SYR LPK+Y  P  + RT L  EVLND WVS  S SED +F   +K Q
Sbjct: 533 EIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVSSKKTQ 592

Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TAL 614
           YEE ++RCED+RFELD++LE+   T + +E + +K++  + +     R+++        +
Sbjct: 593 YEEHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSAEEQAKFRLDNTLGGTSEVI 652

Query: 615 NLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKN 674
           + + ++R+Y D   D++D LRKN S+A+P++L RLK K+EEW   +  FNKVW E   K 
Sbjct: 653 HRKALQRIYADKAADIIDGLRKNPSVAVPIVLKRLKMKEEEWREAQRGFNKVWREQNEKY 712

Query: 675 YHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRK---EDDVLLAIAAGNRRSIVPH 731
           Y KSLDH+   FKQ D+K L +K+L  EI+ I +++++   ED+    +  G      PH
Sbjct: 713 YLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQASEDNA--GVPTG------PH 764

Query: 732 LEFEYSDPDIHEDLYQLIKYSCGEMCTTEQLD--KVMKIWTTFLEPML 777
           L   Y D  I ED   LI +        ++ D  K+ +I   F+  +L
Sbjct: 765 LSLAYEDKQILEDAASLIIHHVKRQTGIQKEDKYKIKQIMYHFIPDLL 812



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 46/80 (57%), Positives = 60/80 (75%)

Query: 41  QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDL 100
           Q+L   DAL+YL  VK  F  + + Y+DFL++MK+FK+Q IDT GVI+RV +LFKGH DL
Sbjct: 106 QRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDL 165

Query: 101 ILGFNTFLPKGYEITLPLED 120
           I+GFNTFLP GY+I +   D
Sbjct: 166 IMGFNTFLPPGYKIEVQTND 185



 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/90 (44%), Positives = 56/90 (62%), Gaps = 13/90 (14%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI-------------TEVY 173
           +PVEF  AIN+VNKIK RFQG   +YK+FL+IL+ Y+KE ++               EVY
Sbjct: 287 QPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVY 346

Query: 174 QEVEALFQDHPDLLEEFTHFLPDSSGAASI 203
            +V  LF++  DLL EF  FLPD++ +  +
Sbjct: 347 AQVARLFKNQEDLLSEFGQFLPDANSSVLL 376



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 29/69 (42%), Positives = 41/69 (59%), Gaps = 2/69 (2%)

Query: 344 AMKSMFSQELSFCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDL 401
           A K     E  F EKV+  LR  + Y+ FLRCL ++ +E+I+R+EL  LV   LG++P+L
Sbjct: 443 ASKHGVGTESLFFEKVRKALRSTEAYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPEL 502

Query: 402 MDGFNGFLA 410
              F  FL 
Sbjct: 503 FTWFKNFLG 511



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 9/81 (11%)

Query: 124 PPKKPVE---------FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQ 174
           PP  PV+          E+A+++++++K +F     VY  FLDI+  ++ ++     V  
Sbjct: 94  PPAVPVQGQQQFQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVIS 153

Query: 175 EVEALFQDHPDLLEEFTHFLP 195
            V  LF+ HPDL+  F  FLP
Sbjct: 154 RVSQLFKGHPDLIMGFNTFLP 174


>gi|363737550|ref|XP_413695.3| PREDICTED: paired amphipathic helix protein Sin3a [Gallus gallus]
          Length = 1274

 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 110/288 (38%), Positives = 168/288 (58%), Gaps = 17/288 (5%)

Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQ 558
           E+D ++C+R   SYR LPK+Y  P  + RT L  EVLND WVS  S SED +F   +K Q
Sbjct: 546 EIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVSSKKTQ 605

Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TAL 614
           YEE ++RCED+RFELD++LE+   T + +E + +K++  + +     R+++        +
Sbjct: 606 YEEHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSAEEQAKFRLDNTLGGTSEVI 665

Query: 615 NLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKN 674
           + + ++R+Y D   D++D LRKN S+A+P++L RLK K+EEW   +  FNKVW E   K 
Sbjct: 666 HRKALQRIYADKAADIIDGLRKNPSVAVPIVLKRLKMKEEEWREAQRGFNKVWREQNEKY 725

Query: 675 YHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRK---EDDVLLAIAAGNRRSIVPH 731
           Y KSLDH+   FKQ D+K L +K+L  EI+ I +++++   ED+    +  G      PH
Sbjct: 726 YLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQASEDNA--GVPTG------PH 777

Query: 732 LEFEYSDPDIHEDLYQLIKYSCGEMCTTEQLD--KVMKIWTTFLEPML 777
           L   Y D  I ED   LI +        ++ D  K+ +I   F+  +L
Sbjct: 778 LSLAYEDKQILEDAASLIIHHVKRQTGIQKEDKYKIKQIMYHFIPDLL 825



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 50/103 (48%), Positives = 67/103 (65%), Gaps = 2/103 (1%)

Query: 18  MISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFK 77
           ++ S   P+     V   G    Q+L   DAL+YL  VK  F  + + Y+DFL++MK+FK
Sbjct: 98  VVQSHAHPA--PPAVPVQGQQQFQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFK 155

Query: 78  AQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLED 120
           +Q IDT GVI+RV +LFKGH DLI+GFNTFLP GY+I +   D
Sbjct: 156 SQSIDTPGVISRVSQLFKGHPDLIMGFNTFLPPGYKIEVQTND 198



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/88 (45%), Positives = 55/88 (62%), Gaps = 13/88 (14%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI-------------TEVY 173
           +PVEF  AIN+VNKIK RFQG   +YK+FL+IL+ Y+KE ++               EVY
Sbjct: 300 QPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVY 359

Query: 174 QEVEALFQDHPDLLEEFTHFLPDSSGAA 201
            +V  LF++  DLL EF  FLPD++ + 
Sbjct: 360 AQVARLFKNQEDLLSEFGQFLPDANSSV 387



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 38/58 (65%), Gaps = 2/58 (3%)

Query: 355 FCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLA 410
           F EKV+  LR  + Y+ FLRCL ++ +E+I+R+EL  LV   LG++P+L   F  FL 
Sbjct: 467 FFEKVRKALRSTEAYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPELFTWFKNFLG 524



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 9/81 (11%)

Query: 124 PPKKPVE---------FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQ 174
           PP  PV+          E+A+++++++K +F     VY  FLDI+  ++ ++     V  
Sbjct: 107 PPAVPVQGQQQFQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVIS 166

Query: 175 EVEALFQDHPDLLEEFTHFLP 195
            V  LF+ HPDL+  F  FLP
Sbjct: 167 RVSQLFKGHPDLIMGFNTFLP 187


>gi|224061745|ref|XP_002192322.1| PREDICTED: paired amphipathic helix protein Sin3a [Taeniopygia
           guttata]
          Length = 1274

 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 110/288 (38%), Positives = 168/288 (58%), Gaps = 17/288 (5%)

Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQ 558
           E+D ++C+R   SYR LPK+Y  P  + RT L  EVLND WVS  S SED +F   +K Q
Sbjct: 546 EIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVSSKKTQ 605

Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TAL 614
           YEE ++RCED+RFELD++LE+   T + +E + +K++  + +     R+++        +
Sbjct: 606 YEEHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSAEEQAKFRLDNTLGGTSEVI 665

Query: 615 NLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKN 674
           + + ++R+Y D   D++D LRKN S+A+P++L RLK K+EEW   +  FNKVW E   K 
Sbjct: 666 HRKALQRIYADKAADIIDGLRKNPSVAVPIVLKRLKMKEEEWREAQRGFNKVWREQNEKY 725

Query: 675 YHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRK---EDDVLLAIAAGNRRSIVPH 731
           Y KSLDH+   FKQ D+K L +K+L  EI+ I +++++   ED+    +  G      PH
Sbjct: 726 YLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQASEDNA--GVPTG------PH 777

Query: 732 LEFEYSDPDIHEDLYQLIKYSCGEMCTTEQLD--KVMKIWTTFLEPML 777
           L   Y D  I ED   LI +        ++ D  K+ +I   F+  +L
Sbjct: 778 LSLAYEDKQILEDAASLIIHHVKRQTGIQKEDKYKIKQIMYHFIPDLL 825



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 47/85 (55%), Positives = 61/85 (71%)

Query: 36  GGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFK 95
           G    Q+L   DAL+YL  VK  F  + + Y+DFL++MK+FK+Q IDT GVI+RV +LFK
Sbjct: 114 GQQQFQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFK 173

Query: 96  GHRDLILGFNTFLPKGYEITLPLED 120
           GH DLI+GFNTFLP GY+I +   D
Sbjct: 174 GHPDLIMGFNTFLPPGYKIEVQTND 198



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/88 (45%), Positives = 55/88 (62%), Gaps = 13/88 (14%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI-------------TEVY 173
           +PVEF  AIN+VNKIK RFQG   +YK+FL+IL+ Y+KE ++               EVY
Sbjct: 300 QPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVY 359

Query: 174 QEVEALFQDHPDLLEEFTHFLPDSSGAA 201
            +V  LF++  DLL EF  FLPD++ + 
Sbjct: 360 AQVARLFKNQEDLLSEFGQFLPDANSSV 387



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 38/58 (65%), Gaps = 2/58 (3%)

Query: 355 FCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLA 410
           F EKV+  LR  + Y+ FLRCL ++ +E+I+R+EL  LV   LG++P+L   F  FL 
Sbjct: 467 FFEKVRKALRSTEAYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPELFTWFKNFLG 524



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 9/81 (11%)

Query: 124 PPKKPVE---------FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQ 174
           PP  PV+          E+A+++++++K +F     VY  FLDI+  ++ ++     V  
Sbjct: 107 PPAVPVQGQQQFQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVIS 166

Query: 175 EVEALFQDHPDLLEEFTHFLP 195
            V  LF+ HPDL+  F  FLP
Sbjct: 167 RVSQLFKGHPDLIMGFNTFLP 187


>gi|348520098|ref|XP_003447566.1| PREDICTED: paired amphipathic helix protein Sin3a-like [Oreochromis
           niloticus]
          Length = 1276

 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 168/287 (58%), Gaps = 15/287 (5%)

Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQ 558
           E+D ++C+R   SYR LPK+Y  P  + RT L  EVLND WVS  S SED +F   +K Q
Sbjct: 552 EIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVSSKKTQ 611

Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TAL 614
           YEE ++RCED+RFELD++LE+   T + +E +  K++  + +     R+++        +
Sbjct: 612 YEEHIYRCEDERFELDVVLETNLATIRVLETVQRKLSRMSAEEQAKFRLDNMLGGSSEVI 671

Query: 615 NLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKN 674
           + + I+R+YGD   D++D L+KN ++++P++L RLK K+EEW   +  FNK+W E   K 
Sbjct: 672 HRKAIQRIYGDKAPDIIDGLKKNPAVSVPIVLKRLKTKEEEWREAQRGFNKIWREQNEKY 731

Query: 675 YHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKE--DDVLLAIAAGNRRSIVPHL 732
           Y KSLDH+   FKQ D+K L +K+L  EI+ I ++++++  ++    +         PHL
Sbjct: 732 YLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQGSEETTTPVTG-------PHL 784

Query: 733 EFEYSDPDIHEDLYQLIKYSCGEMCTTEQLD--KVMKIWTTFLEPML 777
              Y D  I ED   LI +      + ++ D  K+ +I   F+  ML
Sbjct: 785 TLSYEDSQILEDAAALIIHHVKRQTSIQKEDKYKIKQIIYHFIPDML 831



 Score =  105 bits (263), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 56/119 (47%), Positives = 73/119 (61%), Gaps = 6/119 (5%)

Query: 8   VYMNSQIKRPMISSRGEP--SGQTQVVG----GGGGGGAQKLTTNDALAYLKAVKDIFQD 61
           V+  S    P + S G    SG T  V       G    Q+L   DAL+YL  VK  F +
Sbjct: 81  VHGGSHHHSPAVQSHGPSVMSGHTHTVAPQASAQGQQQFQRLKVEDALSYLDQVKLQFGN 140

Query: 62  KREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLED 120
           + + Y+DFL++MK+FK+Q IDT GVI+RV +LFKGH DLI+GFNTFLP GY+I +   D
Sbjct: 141 QPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIMGFNTFLPPGYKIEVQTND 199



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 47/127 (37%), Positives = 74/127 (58%), Gaps = 18/127 (14%)

Query: 124 PP---KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI----------- 169
           PP    +PVEF  AIN+VNKIK RFQG   +YK+FL+IL+ Y+KE ++            
Sbjct: 301 PPMQNNQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPAL 360

Query: 170 --TEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQV 227
              EVY +V  LF++  DLL EF  FLPD++ +  ++   + +   +R+      TA+++
Sbjct: 361 TEQEVYAQVARLFKNQEDLLSEFGQFLPDANSSVLLNKTTAEKAESVRNDHGG--TAKKL 418

Query: 228 HVDKKER 234
            ++ K+R
Sbjct: 419 QLNNKQR 425



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/74 (41%), Positives = 43/74 (58%), Gaps = 2/74 (2%)

Query: 344 AMKSMFSQELSFCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDL 401
           A K     E  F EKV+  LR  + Y  FLRCL ++ +E+I+R+EL  LV   LG++P+L
Sbjct: 462 ASKHGVGTESLFFEKVRKALRSAEAYDNFLRCLVIFNQEVISRAELVQLVLPFLGKFPEL 521

Query: 402 MDGFNGFLARCEKS 415
            + F  FL   E S
Sbjct: 522 FNWFKNFLGYREMS 535



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 40/67 (59%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           ++ E+A+++++++K +F     VY  FLDI+  ++ ++     V   V  LF+ HPDL+ 
Sbjct: 122 LKVEDALSYLDQVKLQFGNQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIM 181

Query: 189 EFTHFLP 195
            F  FLP
Sbjct: 182 GFNTFLP 188


>gi|402912928|ref|XP_003918988.1| PREDICTED: paired amphipathic helix protein Sin3a-like, partial
           [Papio anubis]
          Length = 1162

 Score =  194 bits (492), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 108/285 (37%), Positives = 166/285 (58%), Gaps = 11/285 (3%)

Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQ 558
           E+D ++C+R   SYR LPK+Y  P  + RT L  EVLND WVS  S SED +F   +K Q
Sbjct: 434 EIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVSSKKTQ 493

Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TAL 614
           YEE ++RCED+RFELD++LE+   T + +E + +K++  + +     R+++        +
Sbjct: 494 YEEHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSAEEQAKFRLDNTLGGTSEVI 553

Query: 615 NLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKN 674
           + + ++R+Y D   D++D LRKN S+A+P++L RLK K+EEW   +  FNKVW E   K 
Sbjct: 554 HRKALQRIYADKAADIIDGLRKNPSIAVPIVLKRLKMKEEEWREAQRGFNKVWREQNEKY 613

Query: 675 YHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEF 734
           Y KSLDH+   FKQ D+K L +K+L  EI+ I ++++++     A        + PHL  
Sbjct: 614 YLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQ-----ATEENAGVPVGPHLSL 668

Query: 735 EYSDPDIHEDLYQLIKYSCGEMCTTEQLD--KVMKIWTTFLEPML 777
            Y D  I ED   LI +        ++ D  K+ +I   F+  +L
Sbjct: 669 AYEDKQILEDAAALIIHHVKRQTGIQKEDKYKIKQIMHHFIPDLL 713



 Score = 97.4 bits (241), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 44/74 (59%), Positives = 57/74 (77%)

Query: 47  DALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNT 106
           DAL+YL  VK  F  + + Y+DFL++MK+FK+Q IDT GVI+RV +LFKGH DLI+GFNT
Sbjct: 14  DALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIMGFNT 73

Query: 107 FLPKGYEITLPLED 120
           FLP GY+I +   D
Sbjct: 74  FLPPGYKIEVQTND 87



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/90 (44%), Positives = 56/90 (62%), Gaps = 13/90 (14%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI-------------TEVY 173
           +PVEF  AIN+VNKIK RFQG   +YK+FL+IL+ Y+KE ++               EVY
Sbjct: 189 QPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVY 248

Query: 174 QEVEALFQDHPDLLEEFTHFLPDSSGAASI 203
            +V  LF++  DLL EF  FLPD++ +  +
Sbjct: 249 AQVARLFKNQEDLLSEFGQFLPDANSSVLL 278



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 39/58 (67%), Gaps = 2/58 (3%)

Query: 355 FCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLA 410
           F +KV+  LR  + Y+ FLRCL ++ +E+I+R+EL  LV   LG++P+L + F  FL 
Sbjct: 355 FFDKVRKALRSAEAYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPELFNWFKNFLG 412



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 22/64 (34%), Positives = 38/64 (59%)

Query: 132 EEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFT 191
           E+A+++++++K +F     VY  FLDI+  ++ ++     V   V  LF+ HPDL+  F 
Sbjct: 13  EDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIMGFN 72

Query: 192 HFLP 195
            FLP
Sbjct: 73  TFLP 76


>gi|118403754|ref|NP_001072289.1| SIN3 transcription regulator homolog B [Xenopus (Silurana)
           tropicalis]
 gi|111307815|gb|AAI21316.1| SIN3 homolog B, transcription regulator [Xenopus (Silurana)
           tropicalis]
          Length = 1126

 Score =  194 bits (492), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 110/283 (38%), Positives = 166/283 (58%), Gaps = 13/283 (4%)

Query: 498 QELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKN 557
           +E+D ++C+R   SYR LPK++  P  S RT L  EVLND WVS  S SED +F   +K 
Sbjct: 388 REIDYASCKRIGSSYRALPKSFPHPKCSGRTALCKEVLNDTWVSFPSWSEDSTFVSSKKT 447

Query: 558 QYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TA 613
            YEE L RCED+RFELD++LE+   T + +E + +K++  + +     R++D        
Sbjct: 448 PYEEQLHRCEDERFELDVVLETNLATIRVLESVQKKLSRMSPEDQEKFRLDDRLGGTSEV 507

Query: 614 LNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSK 673
           +  R I R+YGD   D+++ L+KN   A+PV+L RLK K+EEW   +  FNK+W E Y +
Sbjct: 508 IQRRAIYRIYGDKAPDIVESLKKNPVTAVPVVLKRLKAKEEEWREAQRGFNKIWREQYER 567

Query: 674 NYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEIS-EKKRKEDDVLLAIAAGNRRSIVPHL 732
            Y KSLDH++  FKQ D+K+L +K+L  EI+ +  E++ ++ D     ++G      PHL
Sbjct: 568 AYLKSLDHQAVNFKQNDTKALRSKSLLNEIESVYDERQEQQPDGRTTTSSG------PHL 621

Query: 733 EFEYSDPDIHEDLYQLIKYSCGEMCTTEQLDK--VMKIWTTFL 773
            + Y D  I ED   LI +      T ++ DK  + ++   FL
Sbjct: 622 IYTYEDWQILEDAAALITFYVNRQPTIQKEDKDTIWQVLHQFL 664



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 89/240 (37%), Positives = 113/240 (47%), Gaps = 74/240 (30%)

Query: 32  VGGGGGGGAQKLTTN-------------DALAYLKAVKDIFQDKREKYDDFLEVMKDFKA 78
           +  GGGGG  K  +N             DAL+YL  VK  F      Y  FLE+MK+FK+
Sbjct: 1   MASGGGGGNCKPNSNWSKPQEKLPVHVEDALSYLDQVKIRFGSDPATYSGFLEIMKEFKS 60

Query: 79  QRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLP--------------------- 117
           Q IDT GVI RV +LF  H DL+LGFN FLP GY+I LP                     
Sbjct: 61  QSIDTPGVIRRVSQLFHEHPDLMLGFNAFLPLGYKIELPKNGKVVVQTSLASPVSSDATT 120

Query: 118 -----------------------------LEDEQPPPKK-PVEFEEAINFVNKIKTRFQG 147
                                         E  QPPP+   +EF  AI++VNKIKTRF  
Sbjct: 121 SSLSSSRVIVPPVPENVLSEVPEESRQQEKEKPQPPPESDSLEFHNAISYVNKIKTRFLD 180

Query: 148 DDHVYKSFLDILNMYRKEN----------KSITEVYQEVEALFQDHPDLLEEFTHFLPDS 197
              +Y+SFL+IL+ Y+K+            S  EV+ EV +LF+   DLL EF  FLP++
Sbjct: 181 RPEIYRSFLEILHTYQKDQLNPKGRPFRGMSEEEVFTEVASLFRGQEDLLSEFGQFLPEA 240



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 2/67 (2%)

Query: 351 QELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGF 408
           QE SF  KV+  L+    Y+ FLRC+ L+ +E+++ SEL  LV   LG++P+L   F  F
Sbjct: 306 QEFSFFNKVRRVLKSQEVYENFLRCIALFNQELVSGSELLQLVTPFLGKFPELFAQFKSF 365

Query: 409 LARCEKS 415
           L   E S
Sbjct: 366 LGVKELS 372


>gi|432095525|gb|ELK26677.1| Paired amphipathic helix protein Sin3b [Myotis davidii]
          Length = 1094

 Score =  193 bits (491), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 137/407 (33%), Positives = 198/407 (48%), Gaps = 79/407 (19%)

Query: 351 QELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGF 408
           QE SF +KV+  L+    Y+ FLRC+ L+ +E+++ SEL  LV   LG++P+L   F  F
Sbjct: 263 QEFSFFDKVRRVLKSQEVYENFLRCIALFNQELVSGSELLQLVSPFLGKFPELFAQFKSF 322

Query: 409 LARCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRL 468
           L   E S    A  MS +S                         DG+      +RE D  
Sbjct: 323 LGVKELS---FAPPMSDRS------------------------GDGI------SREID-- 347

Query: 469 DKSVAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRT 528
                            YSS  +          + +  R  P     PK       S RT
Sbjct: 348 -----------------YSSCKR----------IGSSYRALPKTYQQPK------CSGRT 374

Query: 529 ELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVE 588
            +  EVLND WVS  S SED +F   +K  YEE L RCED+RFELD++LE+   T + +E
Sbjct: 375 AICKEVLNDTWVSFPSWSEDSTFVSSKKTPYEEQLHRCEDERFELDVVLETNLATIRVLE 434

Query: 589 ELLEKINNNTIKTDGPIRVEDHF----TALNLRCIERLYGDHGLDVMDVLRKNASLALPV 644
            + +K++    +     R++D        +  R I R+YGD   ++++ L+KN   A+PV
Sbjct: 435 SVQKKLSRMAPEDQDKFRLDDCLGGTSEVIQRRAIHRIYGDKAPEIIESLKKNPVTAVPV 494

Query: 645 ILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIK 704
           +L RLK K+EEW   +  FNK+W E Y K Y KSLDH++  FKQ D+K+L +K+L  EI+
Sbjct: 495 VLKRLKAKEEEWREAQQGFNKIWREQYEKAYLKSLDHQAVNFKQNDTKALRSKSLLNEIE 554

Query: 705 EISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLIKY 751
            + ++ +++          +  S  PHL F Y D  I ED   LI Y
Sbjct: 555 SVYDEHQEQHS-----EGRSAPSSEPHLIFVYEDKQILEDAAALISY 596



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 73/186 (39%), Positives = 93/186 (50%), Gaps = 45/186 (24%)

Query: 73  MKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLP----LEDEQP----- 123
           MK+FK+Q IDT GVI RV +LF  H DLI+GFN FLP GY I +P    L  + P     
Sbjct: 1   MKEFKSQSIDTPGVIRRVSQLFHEHPDLIVGFNAFLPLGYRIDIPKNGKLNIQSPLSSQE 60

Query: 124 ---------------------PPKKP-----VEFEEAINFVNKIKTRFQGDDHVYKSFLD 157
                                 P+ P     VEF  AI++VNKIKTRF     +Y+SFL+
Sbjct: 61  NSHNHSDCAENFKQQLLYKEDKPQVPLESDSVEFNNAISYVNKIKTRFLDHPEIYRSFLE 120

Query: 158 ILNMYRKENKSIT----------EVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVP 207
           IL+ Y+KE  S            EV+ EV  LF+   DLL EF  FLP++  +      P
Sbjct: 121 ILHTYQKEQLSTKGRPFRGMSEEEVFTEVANLFRGQEDLLSEFGQFLPEAKRSLFTGNGP 180

Query: 208 SGRNSI 213
              NS+
Sbjct: 181 CEMNSV 186



 Score = 49.3 bits (116), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 10/76 (13%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAG----------VIARVKELFK 95
           N+A++Y+  +K  F D  E Y  FLE++  ++ +++ T G          V   V  LF+
Sbjct: 95  NNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLSTKGRPFRGMSEEEVFTEVANLFR 154

Query: 96  GHRDLILGFNTFLPKG 111
           G  DL+  F  FLP+ 
Sbjct: 155 GQEDLLSEFGQFLPEA 170


>gi|556219|gb|AAB01610.1| transcription regulator [Mus musculus]
          Length = 1282

 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 107/285 (37%), Positives = 166/285 (58%), Gaps = 11/285 (3%)

Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQ 558
           E+D ++C+R   SYR LPK+Y  P  + RT L  EVLND WVS  S SED +F   +K Q
Sbjct: 546 EIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVSSKKTQ 605

Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TAL 614
           YEE ++RCED+RFELD++LE+   T + +E + +K++  + +     R+++        +
Sbjct: 606 YEEHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSAEEQAKFRLDNTLGGTSEVI 665

Query: 615 NLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKN 674
           + + ++R+Y D   D++D LRKN S+A+P++L RLK K+EEW   +  FNKVW +   K 
Sbjct: 666 HRKALQRIYADKAADIIDGLRKNPSIAVPIVLKRLKMKEEEWREAQRGFNKVWRDENEKY 725

Query: 675 YHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEF 734
           Y KSLDH+   FKQ D+K L +K+L  EI+ I ++++++     A        + PHL  
Sbjct: 726 YLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQ-----ATEENAGVPVGPHLSL 780

Query: 735 EYSDPDIHEDLYQLIKYSCGEMCTTEQLD--KVMKIWTTFLEPML 777
            Y D  I ED   LI +        ++ D  K+ +I   F+  +L
Sbjct: 781 AYEDKQILEDAAALIIHHVKRQTGIQKEDKYKIKQIMHHFIPDLL 825



 Score = 99.8 bits (247), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 49/103 (47%), Positives = 67/103 (65%), Gaps = 2/103 (1%)

Query: 18  MISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFK 77
           ++ S   P+     V G      Q+L   DAL+YL  VK  F  + + ++DFL++MK+FK
Sbjct: 98  VVQSHAHPAPPVAPVQGQQQ--FQRLKVEDALSYLDQVKLQFGSQPQVHNDFLDIMKEFK 155

Query: 78  AQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLED 120
           +Q IDT GVI+RV +LFKGH DLI+GFNTFLP GY+I +   D
Sbjct: 156 SQSIDTPGVISRVSQLFKGHPDLIMGFNTFLPPGYKIEVQTND 198



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 39/90 (43%), Positives = 55/90 (61%), Gaps = 13/90 (14%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI-------------TEVY 173
           +PV F  AIN+VNKIK RFQG   +YK+FL+IL+ Y+KE ++               EVY
Sbjct: 300 QPVHFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVY 359

Query: 174 QEVEALFQDHPDLLEEFTHFLPDSSGAASI 203
            +V  LF++  DLL EF  FLPD++ +  +
Sbjct: 360 AQVARLFKNQEDLLSEFGQFLPDANSSVLL 389



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/70 (40%), Positives = 43/70 (61%), Gaps = 2/70 (2%)

Query: 343 NAMKSMFSQELSFCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPD 400
           +A K     E  F +KV+  LR  + Y+ FLRCL ++ +E+I+R+EL  LV   LG++P+
Sbjct: 455 DASKHGVGTESLFFDKVRKALRSAEAYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPE 514

Query: 401 LMDGFNGFLA 410
           L + F  FL 
Sbjct: 515 LFNWFKNFLG 524



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 9/81 (11%)

Query: 124 PPKKPVE---------FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQ 174
           PP  PV+          E+A+++++++K +F     V+  FLDI+  ++ ++     V  
Sbjct: 107 PPVAPVQGQQQFQRLKVEDALSYLDQVKLQFGSQPQVHNDFLDIMKEFKSQSIDTPGVIS 166

Query: 175 EVEALFQDHPDLLEEFTHFLP 195
            V  LF+ HPDL+  F  FLP
Sbjct: 167 RVSQLFKGHPDLIMGFNTFLP 187


>gi|49118365|gb|AAH73365.1| LOC443643 protein, partial [Xenopus laevis]
          Length = 653

 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 107/272 (39%), Positives = 160/272 (58%), Gaps = 11/272 (4%)

Query: 498 QELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKN 557
           +E+D ++C+R   SYR LPK++  P  S RT L  EVLND WVS  S SED +F   +K 
Sbjct: 388 REIDYASCKRIGSSYRALPKSFPHPKCSGRTALCKEVLNDTWVSFPSWSEDSTFVSSKKT 447

Query: 558 QYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TA 613
            YEE L RCED+RFELD++LE+   T + +E + +K++  + +     R++D        
Sbjct: 448 PYEEQLHRCEDERFELDVVLETNLATIRVLESVQKKLSRMSPEDQEKFRLDDRLGGTSEV 507

Query: 614 LNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSK 673
           +  R I R+YGD   D+++ L+KN   A+PV+L RLK K+EEW   +  FNK+W E Y +
Sbjct: 508 IQRRAIYRIYGDKAPDIVESLKKNPVTAVPVVLKRLKAKEEEWREAQRGFNKIWREQYER 567

Query: 674 NYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEI-SEKKRKEDDVLLAIAAGNRRSIVPHL 732
            Y KSLDH++  FKQ D+K+L +K+L  EI+ +  E++ ++ D     ++G      PHL
Sbjct: 568 AYLKSLDHQAVNFKQNDTKALRSKSLLNEIESVYDERQEQQPDGRTTTSSG------PHL 621

Query: 733 EFEYSDPDIHEDLYQLIKYSCGEMCTTEQLDK 764
            + Y D  I ED   LI +      T ++  K
Sbjct: 622 IYTYEDWQILEDAAALITFYVSRQPTIQKKKK 653



 Score =  136 bits (342), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 89/240 (37%), Positives = 111/240 (46%), Gaps = 74/240 (30%)

Query: 32  VGGGGGGGAQKLTTN-------------DALAYLKAVKDIFQDKREKYDDFLEVMKDFKA 78
           +  GGGGG  K   N             DAL+YL  VK  F      Y  FLE+MK+FK+
Sbjct: 1   MASGGGGGNCKPNPNWSKPQEKLPVHVEDALSYLDQVKIRFGSDPATYSGFLEIMKEFKS 60

Query: 79  QRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLP--------------------- 117
           Q IDT GVI RV +LF  H DL+LGFN FLP GY+I LP                     
Sbjct: 61  QSIDTPGVIRRVSQLFHEHPDLMLGFNAFLPLGYKIELPKNGKVVVQTTLSSPVSSDATT 120

Query: 118 -----------------------------LEDEQPPPKK-PVEFEEAINFVNKIKTRFQG 147
                                         E  QPPP+   +EF  AI++VNKIKTRF  
Sbjct: 121 SSLSSSRVIVPPVPENVLSEVPQESRQQEKEKPQPPPESDSLEFHNAISYVNKIKTRFLD 180

Query: 148 DDHVYKSFLDILNMYRKEN----------KSITEVYQEVEALFQDHPDLLEEFTHFLPDS 197
              +Y+SFL+IL+ Y+K+            S  EV+ EV +LF    DLL EF  FLP++
Sbjct: 181 RPEIYRSFLEILHTYQKDQLNPKGRPFRGMSEEEVFTEVASLFHGQEDLLSEFGQFLPEA 240



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 26/62 (41%), Positives = 38/62 (61%), Gaps = 2/62 (3%)

Query: 351 QELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGF 408
           QE SF  KV+  L+    Y+ FLRC+ L+ +E+++ SEL  LV   LG++P+L   F  F
Sbjct: 306 QEFSFFNKVRRVLKSQEVYENFLRCIALFNQELVSGSELLQLVTPFLGKFPELFAQFKSF 365

Query: 409 LA 410
           L 
Sbjct: 366 LG 367


>gi|344283135|ref|XP_003413328.1| PREDICTED: LOW QUALITY PROTEIN: paired amphipathic helix protein
           Sin3b-like [Loxodonta africana]
          Length = 1122

 Score =  193 bits (490), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 112/301 (37%), Positives = 170/301 (56%), Gaps = 12/301 (3%)

Query: 498 QELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKN 557
           +E+D ++C+R   SYR LPK Y  P  S RT +  EVLND WVS  S SED +F   +K 
Sbjct: 389 REIDYASCKRIGSSYRALPKTYQQPKCSGRTAICKEVLNDTWVSFPSWSEDSTFVSSKKT 448

Query: 558 QYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TA 613
            YEE L RCED+RFELD++LE+   T + +E + +K++    +     R++D        
Sbjct: 449 PYEEQLHRCEDERFELDVVLETNLATIRVLESVQKKLSRMAPEDQDKFRLDDCLGGASEV 508

Query: 614 LNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSK 673
           +  R I R+YGD   ++++ L+KN + A+PV+L RLK K+EEW   +  FNKVW E Y K
Sbjct: 509 IQRRAIYRIYGDKAPEIIESLKKNPATAVPVVLKRLKAKEEEWREAQRGFNKVWREQYEK 568

Query: 674 NYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLE 733
            Y KSLDH++  FKQ D+K+L +K+L  EI+ + ++ +++     A  A       PHL 
Sbjct: 569 AYLKSLDHQAVNFKQNDTKALRSKSLLNEIESVYDEHQEQHSEGPAPPASE-----PHLI 623

Query: 734 FEYSDPDIHEDLYQLIKYSCGEMCTTEQLDK--VMKIWTTFLEPM-LGVPSRPQGAEDTE 790
           F Y D  I ED   L+ Y        ++ D+  + ++   F+  +    P  P  +E++ 
Sbjct: 624 FVYEDRQILEDAAALVSYYVARQPAIQKEDQATIQQLLHQFVPSLFFSQPLDPGASEESA 683

Query: 791 D 791
           D
Sbjct: 684 D 684



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 91/237 (38%), Positives = 116/237 (48%), Gaps = 47/237 (19%)

Query: 33  GGGGGGGAQKLTTN--DALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARV 90
           G     G +KL  +  DAL YL  VK  F      Y+ FLE+MK+FK+Q IDT GVI RV
Sbjct: 29  GRSASAGHEKLPVHVEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRV 88

Query: 91  KELFKGHRDLILGFNTFLPKGYEITLP----LEDEQP----------------------- 123
            +LF  H DLI+GFN FLP GY I +P    L  + P                       
Sbjct: 89  SQLFHEHPDLIVGFNAFLPLGYRIDIPKNGKLNIQSPLANQENSHNHSDYADDFKQQALS 148

Query: 124 ---PPKKP-----VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSIT----- 170
               P+ P     VEF  AI++VNKIKTRF     +Y+SFL+IL+ Y+KE  S       
Sbjct: 149 KEDKPQVPLESDSVEFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLSTKGRPFR 208

Query: 171 -----EVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMP 222
                EV+ EV  LF+   DLL EF  FLP++  +      P G NS  +     +P
Sbjct: 209 GMSEEEVFTEVANLFRGQEDLLSEFGQFLPEAKRSLFTGNGPCGMNSAPKGEPEKIP 265



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/67 (41%), Positives = 41/67 (61%), Gaps = 2/67 (2%)

Query: 351 QELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGF 408
           QE SF +KV+  L+    Y+ FLRC+ L+ +E+++ SEL  LV   LG++P+L   F  F
Sbjct: 308 QEFSFFDKVRRVLKSQEVYENFLRCIALFNQELVSGSELLQLVSPFLGKFPELFAQFKSF 367

Query: 409 LARCEKS 415
           L   E S
Sbjct: 368 LGVKELS 374


>gi|148678868|gb|EDL10815.1| transcriptional regulator, SIN3B (yeast), isoform CRA_c [Mus
           musculus]
          Length = 893

 Score =  193 bits (490), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 111/300 (37%), Positives = 170/300 (56%), Gaps = 11/300 (3%)

Query: 498 QELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKN 557
           +E+D ++C+R   SYR LPK Y  P  S RT +  EVLND WVS  S SED +F   +K 
Sbjct: 317 REIDYASCKRIGSSYRALPKTYQQPKCSGRTAICKEVLNDTWVSFPSWSEDSTFVSSKKT 376

Query: 558 QYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TA 613
            YEE L RCED+RFELD++LE+   T + +E + +K++    +    +R++D        
Sbjct: 377 PYEEQLHRCEDERFELDVVLETNLATIRVLESVQKKLSRMAPEDQEKLRLDDCLGGTSEV 436

Query: 614 LNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSK 673
           +  R I R+YGD   +V++ L++N + A+PV+L RLK K+EEW   +  FNK+W E Y K
Sbjct: 437 IQRRAIHRIYGDKAPEVIESLKRNPATAVPVVLKRLKAKEEEWREAQQGFNKIWREQYEK 496

Query: 674 NYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLE 733
            Y KSLDH++  FKQ D+K+L +K+L  EI+ + ++ +++          +  S  PHL 
Sbjct: 497 AYLKSLDHQAVNFKQNDTKALRSKSLLNEIESVYDEHQEQHS-----EGRSAPSSEPHLI 551

Query: 734 FEYSDPDIHEDLYQLIKYSCGEMCTTEQLDK--VMKIWTTFLEPMLGVPSRPQGAEDTED 791
           F Y D  I ED   LI Y        ++ D+  + ++   FL  +      P  ++D+ D
Sbjct: 552 FVYEDRQILEDAAALISYYVKRQPAIQKEDQGTIRQLLHRFLPSLFFSQQCPGTSDDSAD 611



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 69/169 (40%), Positives = 86/169 (50%), Gaps = 44/169 (26%)

Query: 73  MKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPL-------------- 118
           MK+FK+Q IDT GVI RV +LF  H DLI+GFN FLP GY I +P               
Sbjct: 1   MKEFKSQSIDTPGVIRRVSQLFHEHPDLIVGFNAFLPLGYRIDIPKNGKLNIQSPLSSQD 60

Query: 119 ------------------ED--EQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDI 158
                             ED  + P     VEF  AI++VNKIKTRF     +Y+SFL+I
Sbjct: 61  NSHSHGDCGEDFKQMSYKEDRGQVPLESDSVEFNNAISYVNKIKTRFLDHPEIYRSFLEI 120

Query: 159 LNMYRKEN----------KSITEVYQEVEALFQDHPDLLEEFTHFLPDS 197
           L+ Y+KE            S  EV+ EV  LF+   DLL EF  FLP++
Sbjct: 121 LHTYQKEQLHTKGRPFRGMSEEEVFTEVANLFRGQEDLLSEFGQFLPEA 169



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 5/79 (6%)

Query: 351 QELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGF 408
           QE SF +KV+  L+    Y+ FLRC+ L+ +E+++ SEL  LV   LG++P+L   F  F
Sbjct: 236 QEFSFFDKVRRVLKSQEVYENFLRCIALFNQELVSGSELLQLVSPFLGKFPELFAQFKSF 295

Query: 409 LARCEKSEELLADVMSKKS 427
           L   E S    A  MS +S
Sbjct: 296 LGVKELS---FAPPMSDRS 311



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/217 (23%), Positives = 84/217 (38%), Gaps = 60/217 (27%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAG----------VIARVKELFK 95
           N+A++Y+  +K  F D  E Y  FLE++  ++ +++ T G          V   V  LF+
Sbjct: 94  NNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLHTKGRPFRGMSEEEVFTEVANLFR 153

Query: 96  GHRDLILGFNTFLP-------------------KGYEITLP----------LEDEQPPPK 126
           G  DL+  F  FLP                   K  E +L           L     P K
Sbjct: 154 GQEDLLSEFGQFLPEAKRSLFTGNGSCEMNSGQKNEEKSLEHNKKRSRPSLLRPVSAPAK 213

Query: 127 KPVEFE----------------EAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSIT 170
           K ++                  +  +F +K++ R      VY++FL  + ++ +E  S +
Sbjct: 214 KKMKLRGTKDLSIAAVGKYGTLQEFSFFDKVR-RVLKSQEVYENFLRCIALFNQELVSGS 272

Query: 171 EVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVP 207
           E+ Q V       P+L  +F  FL    G   + + P
Sbjct: 273 ELLQLVSPFLGKFPELFAQFKSFL----GVKELSFAP 305


>gi|642621|gb|AAA69774.1| Sin3B [Mus musculus]
 gi|148678869|gb|EDL10816.1| transcriptional regulator, SIN3B (yeast), isoform CRA_d [Mus
           musculus]
          Length = 954

 Score =  192 bits (489), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 111/300 (37%), Positives = 170/300 (56%), Gaps = 11/300 (3%)

Query: 498 QELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKN 557
           +E+D ++C+R   SYR LPK Y  P  S RT +  EVLND WVS  S SED +F   +K 
Sbjct: 378 REIDYASCKRIGSSYRALPKTYQQPKCSGRTAICKEVLNDTWVSFPSWSEDSTFVSSKKT 437

Query: 558 QYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TA 613
            YEE L RCED+RFELD++LE+   T + +E + +K++    +    +R++D        
Sbjct: 438 PYEEQLHRCEDERFELDVVLETNLATIRVLESVQKKLSRMAPEDQEKLRLDDCLGGTSEV 497

Query: 614 LNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSK 673
           +  R I R+YGD   +V++ L++N + A+PV+L RLK K+EEW   +  FNK+W E Y K
Sbjct: 498 IQRRAIHRIYGDKAPEVIESLKRNPATAVPVVLKRLKAKEEEWREAQQGFNKIWREQYEK 557

Query: 674 NYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLE 733
            Y KSLDH++  FKQ D+K+L +K+L  EI+ + ++ +++          +  S  PHL 
Sbjct: 558 AYLKSLDHQAVNFKQNDTKALRSKSLLNEIESVYDEHQEQHS-----EGRSAPSSEPHLI 612

Query: 734 FEYSDPDIHEDLYQLIKYSCGEMCTTEQLDK--VMKIWTTFLEPMLGVPSRPQGAEDTED 791
           F Y D  I ED   LI Y        ++ D+  + ++   FL  +      P  ++D+ D
Sbjct: 613 FVYEDRQILEDAAALISYYVKRQPAIQKEDQGTIRQLLHRFLPSLFFSQQCPGTSDDSAD 672



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 87/211 (41%), Positives = 108/211 (51%), Gaps = 46/211 (21%)

Query: 33  GGGGGGGAQKLTTN--DALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARV 90
           G  G GG +KL  +  DAL YL  VK  F      Y+ FLE+MK+FK+Q IDT GVI RV
Sbjct: 20  GRSGSGGHEKLPVHVEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRV 79

Query: 91  KELFKGHRDLILGFNTFLPKGYEITLPL-------------------------------- 118
            +LF  H DLI+GFN FLP GY I +P                                 
Sbjct: 80  SQLFHEHPDLIVGFNAFLPLGYRIDIPKNGKLNIQSPLSSQDNSHSHGDCGEDFKQMSYK 139

Query: 119 ED--EQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKEN---------- 166
           ED  + P     VEF  AI++VNKIKTRF     +Y+SFL+IL+ Y+KE           
Sbjct: 140 EDRGQVPLESDSVEFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLHTKGRPFRG 199

Query: 167 KSITEVYQEVEALFQDHPDLLEEFTHFLPDS 197
            S  EV+ EV  LF+   DLL EF  FLP++
Sbjct: 200 MSEEEVFTEVANLFRGQEDLLSEFGQFLPEA 230



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 5/79 (6%)

Query: 351 QELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGF 408
           QE SF +KV+  L+    Y+ FLRC+ L+ +E+++ SEL  LV   LG++P+L   F  F
Sbjct: 297 QEFSFFDKVRRVLKSQEVYENFLRCIALFNQELVSGSELLQLVSPFLGKFPELFAQFKSF 356

Query: 409 LARCEKSEELLADVMSKKS 427
           L   E S    A  MS +S
Sbjct: 357 LGVKELS---FAPPMSDRS 372


>gi|388853545|emb|CCF52944.1| related to SIN3-transcription regulatory protein [Ustilago hordei]
          Length = 1489

 Score =  192 bits (489), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 170/627 (27%), Positives = 277/627 (44%), Gaps = 112/627 (17%)

Query: 117 PLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEV 176
           P+   Q P + PVEF  AIN+VNKIK RF  D   YK FL+IL  Y+KE + I +VY +V
Sbjct: 256 PMTPAQDPKRPPVEFNHAINYVNKIKQRFSQDPDTYKQFLEILQTYQKEQRPIHDVYAQV 315

Query: 177 EALFQDHPDLLEEFTHFLPDSSGAAS--------IHYVPSG-RNSILRDRSSAMPTARQV 227
             LF++  DLL+EF  FLPD+S  A         + +V SG   +     S AMP     
Sbjct: 316 TVLFENAKDLLDEFKQFLPDTSAGAQPSGGLFNMLGHVTSGLGGNAAGGPSGAMPAQPGY 375

Query: 228 HVDKKERAMASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERRDDHRRERERDDR 287
                E   A+      ++    P   R        ++R G  E  +    + ++ +   
Sbjct: 376 RGPPSEGPDANRKAGSAAIPGATPSGSR--------KKRSGANESGKPGSGKTKKSKHGH 427

Query: 288 DFENDVNRDFSMQRFPHKRKSARKIEDSTAEP--LHQ-----GGEGDENFGMHPVSSSYD 340
             E         QR P  R+       + A P  +H      G    E  G+ P  +  +
Sbjct: 428 KAE---------QRTPPLRQEPLPASPTFAHPGQMHHVYGIDGMVAAEATGLVPQGTVVN 478

Query: 341 D------KNAMKSMFSQELSFCEKVKDKL--RDDYQEFLRCLHLYTKEIITRSELQSLVG 392
                  +  + ++   E++F ++VK  +  R  Y +FL+ L+LYT++II    L     
Sbjct: 479 GLALGQPQAPLATL--DEVAFFDRVKKHIDDRTTYLDFLKLLNLYTQDIIDVKTLVDRAA 536

Query: 393 DLLGRYPDLMDGFNGFLARCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERD 452
             +G   +L   F G             D+     L NE  I ++V    R+R       
Sbjct: 537 LFIGGNRELFATFKGLCGY---------DMGRHGWLDNEDPIVENVPAPLRER------- 580

Query: 453 DGVKDRDREAREKDRLDKSVAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSY 512
                              V   N  V      Y +  + L  P  E++L+   R    +
Sbjct: 581 -------------------VDLNNCKV------YGASYRKL--PKSEVNLACSGRDPMCW 613

Query: 513 RLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFE 572
            +L  ++              V +  W S     E   F   +KN YE++L+R E++R E
Sbjct: 614 EVLNDSW--------------VSHPTWAS-----EGEGFNPHKKNPYEDALYRSEEERHE 654

Query: 573 LDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TALNLRCIERLYG-DHG 627
            D  +E+   T   +E +  +I+    +     R++        ++  R I+++YG + G
Sbjct: 655 YDYHIEANLRTIALLEPIAARISTMDNEEKAAFRLKPGLGGQSKSIYQRVIKKVYGREQG 714

Query: 628 LDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFK 687
           L+V++ L     +++P++L RLKQK EEW R + ++NKVW E+ ++NY+KSLDH+   FK
Sbjct: 715 LEVINALHDTPCVSVPIVLHRLKQKDEEWKRAQREWNKVWREVDARNYYKSLDHQGVNFK 774

Query: 688 QQDSKSLGAKALSAEI--KEISEKKRK 712
             D K++ AKAL AEI  +++ +++R+
Sbjct: 775 ASDKKAITAKALIAEIEARKLQQQQRR 801



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 43/77 (55%), Positives = 52/77 (67%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
           L   DAL+YL  VK  F +  + Y+ FL++MKDFK+Q IDT GVI RV  LF+GH  LI 
Sbjct: 4   LNVKDALSYLDQVKVQFAEHPDVYNRFLDIMKDFKSQSIDTPGVIERVSTLFRGHPSLIQ 63

Query: 103 GFNTFLPKGYEITLPLE 119
           GFNTFLP GY I   L+
Sbjct: 64  GFNTFLPPGYRIECSLD 80



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 20/67 (29%), Positives = 40/67 (59%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           +  ++A+++++++K +F     VY  FLDI+  ++ ++     V + V  LF+ HP L++
Sbjct: 4   LNVKDALSYLDQVKVQFAEHPDVYNRFLDIMKDFKSQSIDTPGVIERVSTLFRGHPSLIQ 63

Query: 189 EFTHFLP 195
            F  FLP
Sbjct: 64  GFNTFLP 70



 Score = 45.4 bits (106), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 50/102 (49%), Gaps = 9/102 (8%)

Query: 17  PMISSRGEP--SGQTQVVGGGGG--GGAQ-----KLTTNDALAYLKAVKDIFQDKREKYD 67
           P+ +  G P  SG T + GG  G    AQ      +  N A+ Y+  +K  F    + Y 
Sbjct: 233 PVAAPPGAPGSSGHTGMHGGPAGPMTPAQDPKRPPVEFNHAINYVNKIKQRFSQDPDTYK 292

Query: 68  DFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLP 109
            FLE+++ ++ ++     V A+V  LF+  +DL+  F  FLP
Sbjct: 293 QFLEILQTYQKEQRPIHDVYAQVTVLFENAKDLLDEFKQFLP 334


>gi|148678867|gb|EDL10814.1| transcriptional regulator, SIN3B (yeast), isoform CRA_b [Mus
           musculus]
          Length = 975

 Score =  192 bits (489), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 111/300 (37%), Positives = 170/300 (56%), Gaps = 11/300 (3%)

Query: 498 QELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKN 557
           +E+D ++C+R   SYR LPK Y  P  S RT +  EVLND WVS  S SED +F   +K 
Sbjct: 399 REIDYASCKRIGSSYRALPKTYQQPKCSGRTAICKEVLNDTWVSFPSWSEDSTFVSSKKT 458

Query: 558 QYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TA 613
            YEE L RCED+RFELD++LE+   T + +E + +K++    +    +R++D        
Sbjct: 459 PYEEQLHRCEDERFELDVVLETNLATIRVLESVQKKLSRMAPEDQEKLRLDDCLGGTSEV 518

Query: 614 LNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSK 673
           +  R I R+YGD   +V++ L++N + A+PV+L RLK K+EEW   +  FNK+W E Y K
Sbjct: 519 IQRRAIHRIYGDKAPEVIESLKRNPATAVPVVLKRLKAKEEEWREAQQGFNKIWREQYEK 578

Query: 674 NYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLE 733
            Y KSLDH++  FKQ D+K+L +K+L  EI+ + ++ +++          +  S  PHL 
Sbjct: 579 AYLKSLDHQAVNFKQNDTKALRSKSLLNEIESVYDEHQEQHS-----EGRSAPSSEPHLI 633

Query: 734 FEYSDPDIHEDLYQLIKYSCGEMCTTEQLDK--VMKIWTTFLEPMLGVPSRPQGAEDTED 791
           F Y D  I ED   LI Y        ++ D+  + ++   FL  +      P  ++D+ D
Sbjct: 634 FVYEDRQILEDAAALISYYVKRQPAIQKEDQGTIRQLLHRFLPSLFFSQQCPGTSDDSAD 693



 Score =  130 bits (326), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 81/197 (41%), Positives = 100/197 (50%), Gaps = 44/197 (22%)

Query: 45  TNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGF 104
             DAL YL  VK  F      Y+ FLE+MK+FK+Q IDT GVI RV +LF  H DLI+GF
Sbjct: 55  VEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRVSQLFHEHPDLIVGF 114

Query: 105 NTFLPKGYEITLPL--------------------------------ED--EQPPPKKPVE 130
           N FLP GY I +P                                 ED  + P     VE
Sbjct: 115 NAFLPLGYRIDIPKNGKLNIQSPLSSQDNSHSHGDCGEDFKQMSYKEDRGQVPLESDSVE 174

Query: 131 FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKEN----------KSITEVYQEVEALF 180
           F  AI++VNKIKTRF     +Y+SFL+IL+ Y+KE            S  EV+ EV  LF
Sbjct: 175 FNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLHTKGRPFRGMSEEEVFTEVANLF 234

Query: 181 QDHPDLLEEFTHFLPDS 197
           +   DLL EF  FLP++
Sbjct: 235 RGQEDLLSEFGQFLPEA 251



 Score = 58.2 bits (139), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 5/79 (6%)

Query: 351 QELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGF 408
           QE SF +KV+  L+    Y+ FLRC+ L+ +E+++ SEL  LV   LG++P+L   F  F
Sbjct: 318 QEFSFFDKVRRVLKSQEVYENFLRCIALFNQELVSGSELLQLVSPFLGKFPELFAQFKSF 377

Query: 409 LARCEKSEELLADVMSKKS 427
           L   E S    A  MS +S
Sbjct: 378 LGVKELS---FAPPMSDRS 393



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 39/67 (58%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
            E E+A+ +++++K RF  D   Y  FL+I+  ++ ++     V + V  LF +HPDL+ 
Sbjct: 53  TEVEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRVSQLFHEHPDLIV 112

Query: 189 EFTHFLP 195
            F  FLP
Sbjct: 113 GFNAFLP 119


>gi|417413527|gb|JAA53086.1| Putative histone deacetylase complex, partial [Desmodus rotundus]
          Length = 1132

 Score =  192 bits (489), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 137/407 (33%), Positives = 198/407 (48%), Gaps = 79/407 (19%)

Query: 351 QELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGF 408
           QE SF +KV+  L+    Y+ FLRC+ L+ +E+++ SEL  LV   LG++P+L   F  F
Sbjct: 296 QEFSFFDKVRRVLKSQEVYENFLRCIALFNQELVSGSELLQLVSPFLGKFPELFAQFKSF 355

Query: 409 LARCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRL 468
           L   E S    A  MS +S                         DG+      +RE D  
Sbjct: 356 LGVKELS---FAPPMSDRS------------------------GDGI------SREID-- 380

Query: 469 DKSVAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRT 528
                            YSS  +          + +  R  P     PK       S RT
Sbjct: 381 -----------------YSSCKR----------IGSSYRALPKTYQQPK------CSGRT 407

Query: 529 ELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVE 588
            +  EVLND WVS  S SED +F   +K  YEE L RCED+RFELD++LE+   T + +E
Sbjct: 408 AICKEVLNDTWVSFPSWSEDSTFVSSKKTPYEEQLHRCEDERFELDVVLETNLATIRVLE 467

Query: 589 ELLEKINNNTIKTDGPIRVEDHF----TALNLRCIERLYGDHGLDVMDVLRKNASLALPV 644
            + +K++    +     R++D        +  R I R+YGD   ++++ L+KN   A+PV
Sbjct: 468 SVQKKLSRMAPEDQDKFRLDDCLGGTSEVIQRRAIHRIYGDKAPEIIESLKKNPVTAVPV 527

Query: 645 ILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIK 704
           +L RLK K+EEW   +  FNK+W E Y K Y KSLDH++  FKQ D+K+L +K+L  EI+
Sbjct: 528 VLKRLKAKEEEWREAQQGFNKIWREQYEKAYLKSLDHQAVNFKQNDTKALRSKSLLNEIE 587

Query: 705 EISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLIKY 751
            + ++ +++          +  S  PHL F Y D  I ED   LI Y
Sbjct: 588 SVYDEHQEQHS-----EGRSAPSSEPHLIFVYEDRQILEDAAALISY 629



 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 90/228 (39%), Positives = 114/228 (50%), Gaps = 47/228 (20%)

Query: 33  GGGGGGGAQKLTTN--DALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARV 90
           G  G  G +KL  +  DAL YL  VK  F      Y+ FLE+MK+FK+Q IDT GVI RV
Sbjct: 17  GRSGSTGHEKLPVHVEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRV 76

Query: 91  KELFKGHRDLILGFNTFLPKGYEITLP----LEDEQP----------------------- 123
            +LF  H DLI+GFN FLP GY I +P    L  + P                       
Sbjct: 77  SQLFHEHPDLIVGFNAFLPLGYRIDIPKNGKLNIQSPLSSQENSHNHSDCAENFKQQLLY 136

Query: 124 ---PPKKP-----VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSIT----- 170
               P+ P     VEF  AI++VNKIKTRF     +Y+SFL+IL+ Y+KE  S       
Sbjct: 137 KEDKPQVPLESDSVEFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLSTKGRPFR 196

Query: 171 -----EVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSI 213
                EV+ EV  LF+   DLL EF  FLP++  +      P   NS+
Sbjct: 197 GMSEEEVFTEVANLFRGQEDLLSEFGQFLPEAKRSLFTGNGPCEMNSV 244


>gi|157105432|ref|XP_001648867.1| sin3b [Aedes aegypti]
 gi|108869021|gb|EAT33246.1| AAEL014491-PA [Aedes aegypti]
          Length = 1398

 Score =  192 bits (489), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 132/408 (32%), Positives = 201/408 (49%), Gaps = 76/408 (18%)

Query: 352 ELSFCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFL 409
           + +F +KV+  LR  D Y+ FLRCL L+ +EI+++SELQ+LV                FL
Sbjct: 580 DYAFFDKVRKALRSPDVYENFLRCLTLFNQEIVSKSELQTLV--------------TPFL 625

Query: 410 ARCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRLD 469
           +R     +   D +   +      +P+ V +    R +DR + +   D            
Sbjct: 626 SRFPDLLKWFQDFLGPST------VPECVPLASAQR-QDRSQSELATD------------ 666

Query: 470 KSVAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTE 529
                                         +DLS C+R   SY  LPK++     S RT 
Sbjct: 667 ------------------------------IDLSTCKRLGASYCALPKSHENVKCSGRTA 696

Query: 530 LGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEE 589
           L  +VLND WVS  + +ED +F   RK QYEE ++RCED+RFELD+++E+ + T + +E 
Sbjct: 697 LCRDVLNDTWVSFPTWAEDSTFVTSRKTQYEEFIYRCEDERFELDVVIETNSATIRVLEG 756

Query: 590 LLEKINNNTIKTDGPIRVEDHF----TALNLRCIERLYGDHGLDVMDVLRKNASLALPVI 645
           + +K++  +       R+++        ++ R ++R+YGD   D++  LRKN  +A+PV+
Sbjct: 757 VQKKLSRMSQDEVSRFRLDECLGGTSATIHQRALKRIYGDKANDIIQGLRKNPVVAVPVV 816

Query: 646 LTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIK- 704
           L RLK K+EEW   +  FNK W E   K Y KSLDH+   FKQ D K+L +K+L  EI+ 
Sbjct: 817 LRRLKAKEEEWREAQKGFNKQWREQNEKYYLKSLDHQGINFKQNDIKALRSKSLFNEIET 876

Query: 705 ---EISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLI 749
              E+S  KR E        + N  +  PHL   Y D  I +D   L+
Sbjct: 877 LFDEVSYMKRHEQT---EDGSSNPLTSGPHLVLPYKDKTILDDAANLL 921



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 44/80 (55%), Positives = 59/80 (73%)

Query: 42  KLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLI 101
           +L   DAL+YL  VK  F ++ + Y+DFL++MK+FK+Q IDT GVI RV  LFKGH +LI
Sbjct: 88  RLKVEDALSYLDQVKFRFGNQPQVYNDFLDIMKEFKSQSIDTPGVIQRVSNLFKGHPELI 147

Query: 102 LGFNTFLPKGYEITLPLEDE 121
           +GFNTFLP GY+I +   D+
Sbjct: 148 VGFNTFLPPGYKIEVQANDQ 167



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/97 (42%), Positives = 52/97 (53%), Gaps = 17/97 (17%)

Query: 125 PKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENK----------------- 167
           P +PVEF  AI +VNKIK RF      YK FL+IL+ Y+KE K                 
Sbjct: 328 PNQPVEFNHAITYVNKIKNRFHSQPEKYKRFLEILHTYQKEQKIHKEGTQGACNSGAKQL 387

Query: 168 SITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIH 204
           +  EVY +V  LF +  DLL EF  FLPD++  A +H
Sbjct: 388 TEAEVYTQVAKLFDNQEDLLREFGQFLPDATSHAPMH 424



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 41/67 (61%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           ++ E+A+++++++K RF     VY  FLDI+  ++ ++     V Q V  LF+ HP+L+ 
Sbjct: 89  LKVEDALSYLDQVKFRFGNQPQVYNDFLDIMKEFKSQSIDTPGVIQRVSNLFKGHPELIV 148

Query: 189 EFTHFLP 195
            F  FLP
Sbjct: 149 GFNTFLP 155



 Score = 43.5 bits (101), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 17/92 (18%)

Query: 35  GGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFK----------------- 77
           G     Q +  N A+ Y+  +K+ F  + EKY  FLE++  ++                 
Sbjct: 324 GNAQPNQPVEFNHAITYVNKIKNRFHSQPEKYKRFLEILHTYQKEQKIHKEGTQGACNSG 383

Query: 78  AQRIDTAGVIARVKELFKGHRDLILGFNTFLP 109
           A+++  A V  +V +LF    DL+  F  FLP
Sbjct: 384 AKQLTEAEVYTQVAKLFDNQEDLLREFGQFLP 415


>gi|355719433|gb|AES06599.1| SIN3-like protein A, transcription regulator [Mustela putorius
           furo]
          Length = 764

 Score =  192 bits (489), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 111/288 (38%), Positives = 168/288 (58%), Gaps = 17/288 (5%)

Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQ 558
           E+D ++C+R   SYR LPK+Y  P  + RT L  EVLND WVS  S SED +F   +K Q
Sbjct: 37  EIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVSSKKTQ 96

Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TAL 614
           YEE ++RCED+RFELD++LE+   T + +E + +K++  + +     R+++        +
Sbjct: 97  YEEHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSAEEQAKFRLDNTLGGTSEVI 156

Query: 615 NLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKN 674
           + + ++R+Y D   D++D LRKN S+A+P++L RLK K+EEW   +  FNKVW E   K 
Sbjct: 157 HRKALQRIYADKAADIIDGLRKNPSIAVPIVLKRLKMKEEEWREAQRGFNKVWREQNEKY 216

Query: 675 YHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRK---EDDVLLAIAAGNRRSIVPH 731
           Y KSLDH+   FKQ D+K L +K+L  EI+ I +++++   ED+    I  G      PH
Sbjct: 217 YLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQATEDNA--GIPVG------PH 268

Query: 732 LEFEYSDPDIHEDLYQLIKYSCGEMCTTEQLD--KVMKIWTTFLEPML 777
           L   Y D  I ED   LI +        ++ D  K+ +I   F+  +L
Sbjct: 269 LSLAYEDKQILEDAAALIIHHVKRQTGIQKEDKYKIKQIMHHFIPDLL 316


>gi|157105430|ref|XP_001648866.1| sin3b [Aedes aegypti]
 gi|108869020|gb|EAT33245.1| AAEL014491-PB [Aedes aegypti]
          Length = 1621

 Score =  192 bits (489), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 136/441 (30%), Positives = 212/441 (48%), Gaps = 78/441 (17%)

Query: 352 ELSFCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFL 409
           + +F +KV+  LR  D Y+ FLRCL L+ +EI+++SELQ+LV                FL
Sbjct: 580 DYAFFDKVRKALRSPDVYENFLRCLTLFNQEIVSKSELQTLV--------------TPFL 625

Query: 410 ARCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRLD 469
           +R     +   D +   +      +P+ V +    R +DR + +   D            
Sbjct: 626 SRFPDLLKWFQDFLGPST------VPECVPLASAQR-QDRSQSELATD------------ 666

Query: 470 KSVAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTE 529
                                         +DLS C+R   SY  LPK++     S RT 
Sbjct: 667 ------------------------------IDLSTCKRLGASYCALPKSHENVKCSGRTA 696

Query: 530 LGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEE 589
           L  +VLND WVS  + +ED +F   RK QYEE ++RCED+RFELD+++E+ + T + +E 
Sbjct: 697 LCRDVLNDTWVSFPTWAEDSTFVTSRKTQYEEFIYRCEDERFELDVVIETNSATIRVLEG 756

Query: 590 LLEKINNNTIKTDGPIRVEDHF----TALNLRCIERLYGDHGLDVMDVLRKNASLALPVI 645
           + +K++  +       R+++        ++ R ++R+YGD   D++  LRKN  +A+PV+
Sbjct: 757 VQKKLSRMSQDEVSRFRLDECLGGTSATIHQRALKRIYGDKANDIIQGLRKNPVVAVPVV 816

Query: 646 LTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIK- 704
           L RLK K+EEW   +  FNK W E   K Y KSLDH+   FKQ D K+L +K+L  EI+ 
Sbjct: 817 LRRLKAKEEEWREAQKGFNKQWREQNEKYYLKSLDHQGINFKQNDIKALRSKSLFNEIET 876

Query: 705 ---EISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLIKYSCGEMCTTEQ 761
              E+S  KR E        + N  +  PHL   Y D  I +D   L+ +        ++
Sbjct: 877 LFDEVSYMKRHEQT---EDGSSNPLTSGPHLVLPYKDKTILDDAANLLIHHVKRQTGIQK 933

Query: 762 LDK--VMKIWTTFLEPMLGVP 780
            +K  +  I   F+  +   P
Sbjct: 934 QEKARIKHILRQFVPDLFFAP 954



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 44/80 (55%), Positives = 59/80 (73%)

Query: 42  KLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLI 101
           +L   DAL+YL  VK  F ++ + Y+DFL++MK+FK+Q IDT GVI RV  LFKGH +LI
Sbjct: 88  RLKVEDALSYLDQVKFRFGNQPQVYNDFLDIMKEFKSQSIDTPGVIQRVSNLFKGHPELI 147

Query: 102 LGFNTFLPKGYEITLPLEDE 121
           +GFNTFLP GY+I +   D+
Sbjct: 148 VGFNTFLPPGYKIEVQANDQ 167



 Score = 79.0 bits (193), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/97 (42%), Positives = 52/97 (53%), Gaps = 17/97 (17%)

Query: 125 PKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENK----------------- 167
           P +PVEF  AI +VNKIK RF      YK FL+IL+ Y+KE K                 
Sbjct: 328 PNQPVEFNHAITYVNKIKNRFHSQPEKYKRFLEILHTYQKEQKIHKEGTQGACNSGAKQL 387

Query: 168 SITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIH 204
           +  EVY +V  LF +  DLL EF  FLPD++  A +H
Sbjct: 388 TEAEVYTQVAKLFDNQEDLLREFGQFLPDATSHAPMH 424



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 41/67 (61%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           ++ E+A+++++++K RF     VY  FLDI+  ++ ++     V Q V  LF+ HP+L+ 
Sbjct: 89  LKVEDALSYLDQVKFRFGNQPQVYNDFLDIMKEFKSQSIDTPGVIQRVSNLFKGHPELIV 148

Query: 189 EFTHFLP 195
            F  FLP
Sbjct: 149 GFNTFLP 155



 Score = 43.9 bits (102), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 17/92 (18%)

Query: 35  GGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFK----------------- 77
           G     Q +  N A+ Y+  +K+ F  + EKY  FLE++  ++                 
Sbjct: 324 GNAQPNQPVEFNHAITYVNKIKNRFHSQPEKYKRFLEILHTYQKEQKIHKEGTQGACNSG 383

Query: 78  AQRIDTAGVIARVKELFKGHRDLILGFNTFLP 109
           A+++  A V  +V +LF    DL+  F  FLP
Sbjct: 384 AKQLTEAEVYTQVAKLFDNQEDLLREFGQFLP 415


>gi|427792227|gb|JAA61565.1| Putative transcriptional co-repressor sin3a protein, partial
           [Rhipicephalus pulchellus]
          Length = 1138

 Score =  192 bits (489), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 139/439 (31%), Positives = 212/439 (48%), Gaps = 78/439 (17%)

Query: 352 ELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFL 409
           E +F +KV+  LR    Y  FLRCL LY +EI++RSEL  LV   LG++P+L   F  F+
Sbjct: 243 EFAFFDKVRRALRGQEVYDNFLRCLILYNQEIVSRSELVHLVTPFLGKFPELFKWFKDFI 302

Query: 410 ARCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRLD 469
              +   ++               IP  V  ++R                          
Sbjct: 303 GYKDLGGQIEP-------------IPNKVVQQER-------------------------- 323

Query: 470 KSVAFVNKDVGPKMSM-YSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRT 528
                ++ D  P M + YSS  +Y A            R  P   + PK       S RT
Sbjct: 324 -----ISGD--PSMEIDYSSCKRYGAS----------YRALPKNIVQPK------CSGRT 360

Query: 529 ELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVE 588
            L  EVLND WVS  S SED +F   RK QYEE ++RCED+RFELD+++E+   T + +E
Sbjct: 361 PLCKEVLNDTWVSFPSWSEDSTFVSSRKTQYEEYIYRCEDERFELDVVVETNLSTIRILE 420

Query: 589 ELLEKINNNTIKTDGPIRVEDHF----TALNLRCIERLYGDHGLDVMDVLRKNASLALPV 644
            + +K+   + +     ++ D+       L  + I R+YGD   ++++ L++N ++A+P+
Sbjct: 421 AVQKKLQRMSTEDKQRFQLGDNLGGSSNVLQQQAIRRIYGDKATEIIEGLKRNPTVAVPL 480

Query: 645 ILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIK 704
           +L RLK K+EEW   +  FNKVW E   K Y KSLDH+   FKQ D K L +K+L  EI+
Sbjct: 481 VLRRLKAKEEEWREAQKSFNKVWREQNEKYYLKSLDHQGITFKQNDVKFLRSKSLLNEIE 540

Query: 705 EISEKKRKE-DDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLIKYSCGEMCTTEQLD 763
            I E++R++ ++    +  G      PH+   Y D  I ED   LI +         + D
Sbjct: 541 AIYEERREQMEEGTGEVPTG------PHMSLAYLDRSILEDAANLIIHHVKRQTGINKED 594

Query: 764 --KVMKIWTTFLEPMLGVP 780
             K+ ++   F+  +  +P
Sbjct: 595 KQKIKQLLRQFIPDLFCLP 613



 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 13/89 (14%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI-------------TEVY 173
           +PVEF  AIN+VNKIK RFQG   +YK FL+IL+ Y+KE +++             +EVY
Sbjct: 66  QPVEFNHAINYVNKIKNRFQGQPDIYKQFLEILHTYQKEQRNLKEGVQTGAKPLTESEVY 125

Query: 174 QEVEALFQDHPDLLEEFTHFLPDSSGAAS 202
            +V  LFQ+  DLL+EF  FLPD++GA++
Sbjct: 126 AQVAKLFQNQEDLLQEFGQFLPDANGAST 154



 Score = 48.9 bits (115), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 60/280 (21%), Positives = 100/280 (35%), Gaps = 93/280 (33%)

Query: 21  SRGEP-SGQTQVVGGGGGGG-------AQKLTTNDALAYLKAVKDIFQDKREKYDDFLEV 72
           S G P + Q   V  GG          +Q +  N A+ Y+  +K+ FQ + + Y  FLE+
Sbjct: 38  SHGAPMASQPPAVASGGQSATAPASQASQPVEFNHAINYVNKIKNRFQGQPDIYKQFLEI 97

Query: 73  MKDFK-------------AQRIDTAGVIARVKELFKGHRDLILGFNTFLPK--------- 110
           +  ++             A+ +  + V A+V +LF+   DL+  F  FLP          
Sbjct: 98  LHTYQKEQRNLKEGVQTGAKPLTESEVYAQVAKLFQNQEDLLQEFGQFLPDANGASTHSL 157

Query: 111 -------GYE-------------------ITLP---------LEDEQPPPKKP------- 128
                  G++                   +T P         L+   PP K+P       
Sbjct: 158 VTHSLDFGFQPVKAVNNDHTAAAKKPSTGLTKPSLVSGLSTSLKQAGPPLKRPLSHLSGS 217

Query: 129 ------------VEFEEA--------INFVNKIKTRFQGDDHVYKSFLDILNMYRKENKS 168
                       V   EA          F +K++   +G + VY +FL  L +Y +E  S
Sbjct: 218 VTKKQKMTSLKDVSLAEAGKHGTLNEFAFFDKVRRALRGQE-VYDNFLRCLILYNQEIVS 276

Query: 169 ITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPS 208
            +E+   V       P+L + F  F+        I  +P+
Sbjct: 277 RSELVHLVTPFLGKFPELFKWFKDFIGYKDLGGQIEPIPN 316


>gi|427792221|gb|JAA61562.1| Putative transcriptional co-repressor sin3a protein, partial
           [Rhipicephalus pulchellus]
          Length = 1022

 Score =  192 bits (488), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 139/439 (31%), Positives = 212/439 (48%), Gaps = 78/439 (17%)

Query: 352 ELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFL 409
           E +F +KV+  LR    Y  FLRCL LY +EI++RSEL  LV   LG++P+L   F  F+
Sbjct: 243 EFAFFDKVRRALRGQEVYDNFLRCLILYNQEIVSRSELVHLVTPFLGKFPELFKWFKDFI 302

Query: 410 ARCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRLD 469
              +   ++               IP  V  ++R                          
Sbjct: 303 GYKDLGGQIEP-------------IPNKVVQQER-------------------------- 323

Query: 470 KSVAFVNKDVGPKMSM-YSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRT 528
                ++ D  P M + YSS  +Y A            R  P   + PK       S RT
Sbjct: 324 -----ISGD--PSMEIDYSSCKRYGAS----------YRALPKNIVQPK------CSGRT 360

Query: 529 ELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVE 588
            L  EVLND WVS  S SED +F   RK QYEE ++RCED+RFELD+++E+   T + +E
Sbjct: 361 PLCKEVLNDTWVSFPSWSEDSTFVSSRKTQYEEYIYRCEDERFELDVVVETNLSTIRILE 420

Query: 589 ELLEKINNNTIKTDGPIRVEDHF----TALNLRCIERLYGDHGLDVMDVLRKNASLALPV 644
            + +K+   + +     ++ D+       L  + I R+YGD   ++++ L++N ++A+P+
Sbjct: 421 AVQKKLQRMSTEDKQRFQLGDNLGGSSNVLQQQAIRRIYGDKATEIIEGLKRNPTVAVPL 480

Query: 645 ILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIK 704
           +L RLK K+EEW   +  FNKVW E   K Y KSLDH+   FKQ D K L +K+L  EI+
Sbjct: 481 VLRRLKAKEEEWREAQKSFNKVWREQNEKYYLKSLDHQGITFKQNDVKFLRSKSLLNEIE 540

Query: 705 EISEKKRKE-DDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLIKYSCGEMCTTEQLD 763
            I E++R++ ++    +  G      PH+   Y D  I ED   LI +         + D
Sbjct: 541 AIYEERREQMEEGTGEVPTG------PHMSLAYLDRSILEDAANLIIHHVKRQTGINKED 594

Query: 764 --KVMKIWTTFLEPMLGVP 780
             K+ ++   F+  +  +P
Sbjct: 595 KQKIKQLLRQFIPDLFCLP 613



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 13/89 (14%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI-------------TEVY 173
           +PVEF  AIN+VNKIK RFQG   +YK FL+IL+ Y+KE +++             +EVY
Sbjct: 66  QPVEFNHAINYVNKIKNRFQGQPDIYKQFLEILHTYQKEQRNLKEGVQTGAKPLTESEVY 125

Query: 174 QEVEALFQDHPDLLEEFTHFLPDSSGAAS 202
            +V  LFQ+  DLL+EF  FLPD++GA++
Sbjct: 126 AQVAKLFQNQEDLLQEFGQFLPDANGAST 154



 Score = 45.4 bits (106), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 30/110 (27%), Positives = 50/110 (45%), Gaps = 21/110 (19%)

Query: 21  SRGEP-SGQTQVVGGGGGGG-------AQKLTTNDALAYLKAVKDIFQDKREKYDDFLEV 72
           S G P + Q   V  GG          +Q +  N A+ Y+  +K+ FQ + + Y  FLE+
Sbjct: 38  SHGAPMASQPPAVASGGQSATAPASQASQPVEFNHAINYVNKIKNRFQGQPDIYKQFLEI 97

Query: 73  MKDFK-------------AQRIDTAGVIARVKELFKGHRDLILGFNTFLP 109
           +  ++             A+ +  + V A+V +LF+   DL+  F  FLP
Sbjct: 98  LHTYQKEQRNLKEGVQTGAKPLTESEVYAQVAKLFQNQEDLLQEFGQFLP 147


>gi|358057285|dbj|GAA96894.1| hypothetical protein E5Q_03567 [Mixia osmundae IAM 14324]
          Length = 1855

 Score =  192 bits (488), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 183/682 (26%), Positives = 291/682 (42%), Gaps = 145/682 (21%)

Query: 124 PPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDH 183
           P + PVEF  AIN+VNKIK RF GD   YK+FL+IL  Y+KE + I +VY  V  LF+  
Sbjct: 281 PKRPPVEFNHAINYVNKIKNRFTGDPETYKTFLEILQTYQKEQRPIQDVYASVTILFKHA 340

Query: 184 PDLLEEFTHFLPDSS---------------------------GAASIHYVPSGRNSIL-- 214
           PDLL+EF  FLPD+S                           G AS  Y  +G       
Sbjct: 341 PDLLDEFKQFLPDTSQPGTTSSGLFGMLNAPGGMLNAPGMLDGPASDPYGNTGYGQGFGN 400

Query: 215 -------RDRSSAMPTARQVHVDKKERAMASHADRDLSVDRPDPDHDRVLLKSDKDQRRR 267
                   + +S  P+ R     K     AS +D   S  R  P +D   +    + R +
Sbjct: 401 SAYPGDTYNSASFSPSKRS---SKNATGSASRSDPSRSKKRRHPAYDMDGMPVSHEPRSK 457

Query: 268 GEKERERRDDHRRERERDDRDFENDVNRDFSMQRFPHKRKSARKIEDSTAEPLHQGGEGD 327
             K   RR   R +  R     +  ++ D++ Q F           D     L       
Sbjct: 458 SGK--SRRPKQRLQSPRSTSPIQQQLDVDYAAQPF-----------DPYGTYLQPVQPPP 504

Query: 328 ENFGMHPVSSSYDDKNAMKSMFS-QELSFCEKVKDKL--RDDYQEFLRCLHLYTKEIITR 384
                      + +    +++ S +ELSF +KVK  +  R  Y EFL+ L+LY++EI+  
Sbjct: 505 PPTIPPAPPLLFPNGFPGQALVSAEELSFFDKVKKFIDDRQTYHEFLKTLNLYSQEIVDE 564

Query: 385 SELQSLVGDLLGRYPDLMDGFNGFLARCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRD 444
             L S V + +GR  DL D F          +EL+         W+     KS  V   +
Sbjct: 565 ETLVSKVFEFIGRDEDLFDSF----------KELVG--------WDPV---KSGYVNGEE 603

Query: 445 RDRDRERDDGVKDRDREAREKDRLDKSVAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSN 504
              D          +  A E+ +LD              S+ S    Y   P  E++L+ 
Sbjct: 604 WFID----------NCAALERPKLDLQ------------SLESFGPSYRKLPRDEIELAC 641

Query: 505 CERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLF 564
             R    + +L  +Y++ +               W S  +G         + N YE +L 
Sbjct: 642 SGRDAHCWSVLNDHYVVFAT--------------WASEGTGGH-------KSNMYETALA 680

Query: 565 RCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDG--------PIRVEDHFTALNL 616
             E +R    + +ES+    +RV  LLE IN+     +         P  +     ++  
Sbjct: 681 NSEQERHWYSVQIESL----QRVIALLEPINDRITTMNADERSRLRLPPGLGSTGRSIVE 736

Query: 617 RCIERLYG--------DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWA 668
           R ++++YG        +HG +V+  L  N ++A+P++L RLKQK E+W +   ++N+VW 
Sbjct: 737 RIVKKIYGGDMPQTRNEHGTEVLRALSDNPAVAVPIVLARLKQKDEDWKKALREWNRVWR 796

Query: 669 EIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSI 728
           E+  KN++++LDH+   FK  D +++  KAL  EI E+  + R++  VL+     + R  
Sbjct: 797 EVDVKNHYRALDHQGVGFKTNDKRNINPKALITEI-EVLRRDRQQKRVLIPAETSSLR-- 853

Query: 729 VPHLEFEY--SDPDIHEDLYQL 748
            P+ +FE   SD  +  D+++L
Sbjct: 854 -PNHQFELGMSDRAVLFDVFKL 874



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 47/80 (58%), Positives = 53/80 (66%)

Query: 35  GGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELF 94
           G G   + L   DAL+YL  VK  F+D  E Y+ FL+VMKDFK Q IDT GVI RV  LF
Sbjct: 83  GLGPNYRPLNVKDALSYLDEVKLRFRDAPEVYNRFLDVMKDFKTQAIDTPGVIDRVSSLF 142

Query: 95  KGHRDLILGFNTFLPKGYEI 114
           +GH  LI GFNTFLP GY I
Sbjct: 143 RGHPALIQGFNTFLPPGYRI 162



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/72 (30%), Positives = 43/72 (59%)

Query: 124 PPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDH 183
           P  +P+  ++A+++++++K RF+    VY  FLD++  ++ +      V   V +LF+ H
Sbjct: 86  PNYRPLNVKDALSYLDEVKLRFRDAPEVYNRFLDVMKDFKTQAIDTPGVIDRVSSLFRGH 145

Query: 184 PDLLEEFTHFLP 195
           P L++ F  FLP
Sbjct: 146 PALIQGFNTFLP 157



 Score = 43.1 bits (100), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 22/64 (34%), Positives = 34/64 (53%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFN 105
           N A+ Y+  +K+ F    E Y  FLE+++ ++ ++     V A V  LFK   DL+  F 
Sbjct: 289 NHAINYVNKIKNRFTGDPETYKTFLEILQTYQKEQRPIQDVYASVTILFKHAPDLLDEFK 348

Query: 106 TFLP 109
            FLP
Sbjct: 349 QFLP 352


>gi|358412870|ref|XP_003582415.1| PREDICTED: paired amphipathic helix protein Sin3b-like [Bos taurus]
          Length = 1122

 Score =  192 bits (487), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 123/354 (34%), Positives = 185/354 (52%), Gaps = 30/354 (8%)

Query: 498 QELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKN 557
           +E+D ++C+R   SYR LPK Y  P  S RT +  EVLND WVS  S SED +F   +K 
Sbjct: 383 REIDYASCKRIGSSYRALPKTYQQPXCSGRTAICKEVLNDTWVSFPSWSEDSTFVSSKKT 442

Query: 558 QYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TA 613
            YEE L RCED+RFELD++LE+   T + +E + +K++    +     R++D        
Sbjct: 443 PYEEQLHRCEDERFELDVVLETNLATIRVLESVQKKLSRMAPEDQEKFRLDDCLGGTSEV 502

Query: 614 LNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSK 673
           +  R I R+YGD   ++++ L+KN   A+PV+L RLK K+EEW   +  FNK+W E Y K
Sbjct: 503 IQRRAIHRIYGDKAPEIIESLKKNPVTAVPVVLKRLKAKEEEWREAQQGFNKIWREQYEK 562

Query: 674 NYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLE 733
            Y KSLDH++  FKQ D+K+L +K+L  EI+ + ++ +++          +  S  PHL 
Sbjct: 563 AYLKSLDHQAVNFKQNDTKALRSKSLLNEIESVYDEHQEQHS-----EGRSAPSSEPHLI 617

Query: 734 FEYSDPDIHEDLYQLIKYSCGEMCTTEQLDK--VMKIWTTFLEPMLGVPSRPQGA-EDTE 790
           F Y D  I ED   LI Y        ++ D+  + ++   F+  +        GA ED+ 
Sbjct: 618 FVYEDRQILEDAAALISYYVKRQPAIQKEDQGTIHQLVHQFVPSLFFSQQLDLGASEDSA 677

Query: 791 DVVKAKSHTVKSRAASVGDSDGSPDGDAAAMTSKHSNPSRNGDESIPPEQSSSS 844
           D                 +   SP G AA        P+  G +S PPE+  ++
Sbjct: 678 D-----------------EGRASPQGQAADPGGDRKKPA-PGPQSSPPEEKGAA 713



 Score =  142 bits (359), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 91/228 (39%), Positives = 115/228 (50%), Gaps = 47/228 (20%)

Query: 33  GGGGGGGAQKLTTN--DALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARV 90
           G  G GG +KL  +  DAL YL  VK  F      Y+ FLE+MK+FK+Q IDT GVI RV
Sbjct: 23  GRSGSGGHEKLPVHVEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRV 82

Query: 91  KELFKGHRDLILGFNTFLPKGYEITLP----LEDEQP----------------------- 123
            +LF  H DLI+GFN FLP GY I +P    L  + P                       
Sbjct: 83  SQLFHEHPDLIVGFNAFLPLGYRIDIPKNGKLNIQSPLSSQENSHSHSDCAESVKQQTLY 142

Query: 124 ---PPKKP-----VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSIT----- 170
               P+ P     VEF  AI++VNKIKTRF     +Y+SFL+IL+ Y+KE  S       
Sbjct: 143 KEDKPQVPLESDSVEFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLSTKGRPFR 202

Query: 171 -----EVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSI 213
                EV+ EV  LF+   DLL EF  FLP++  +      P   NS+
Sbjct: 203 GMSEEEVFTEVANLFRGQEDLLSEFGQFLPEAKRSLFTGNGPCEMNSV 250



 Score = 60.1 bits (144), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 40/62 (64%), Gaps = 2/62 (3%)

Query: 351 QELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGF 408
           QE SF +KV+  L+    Y+ FLRC+ L+ +E+++ SEL  LVG  LG++P+L   F  F
Sbjct: 302 QEFSFFDKVRRVLKSQEVYENFLRCIALFNQELVSGSELLQLVGPFLGKFPELFAQFKSF 361

Query: 409 LA 410
           L 
Sbjct: 362 LG 363


>gi|148237826|ref|NP_001090601.1| SIN3 transcription regulator homolog B [Xenopus laevis]
 gi|120538597|gb|AAI29064.1| LOC100036844 protein [Xenopus laevis]
          Length = 1125

 Score =  192 bits (487), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 108/283 (38%), Positives = 166/283 (58%), Gaps = 13/283 (4%)

Query: 498 QELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKN 557
           +E+D ++C+R   SYR LPK++  P  S RT L  EVLND WVS  S SED +F   +K 
Sbjct: 388 REIDYASCKRIGSSYRALPKSFSHPKCSGRTALCKEVLNDTWVSFPSWSEDSTFVSSKKT 447

Query: 558 QYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TA 613
            YEE L RCED+RFELD++LE+   T + +E + +K++  + +     R++D        
Sbjct: 448 PYEEQLHRCEDERFELDVVLETNLATIRVLESVQKKLSRMSPEDQEKFRLDDRLGGTSEV 507

Query: 614 LNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSK 673
           +  R I R+YGD   D+++ L+KN   A+PV+L RLK K+EEW   +  FNK+W E Y +
Sbjct: 508 IQRRAIYRIYGDKAPDIVESLKKNPVTAVPVVLKRLKAKEEEWREAQRGFNKIWREQYER 567

Query: 674 NYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEIS-EKKRKEDDVLLAIAAGNRRSIVPHL 732
            Y KSLDH++  FKQ D+K+L +K++  EI+ +  E++ ++ D     ++G      PHL
Sbjct: 568 AYMKSLDHQAVNFKQNDTKALRSKSMLNEIESVYDERQEQQPDGRTTTSSG------PHL 621

Query: 733 EFEYSDPDIHEDLYQLIKYSCGEMCTTEQLDK--VMKIWTTFL 773
            + Y D  I ED   LI +      T ++ D+  + ++   FL
Sbjct: 622 IYTYEDWQIMEDAAALITFYVSRQPTIQKEDRDTIWQVLHQFL 664



 Score =  133 bits (334), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 87/240 (36%), Positives = 113/240 (47%), Gaps = 74/240 (30%)

Query: 32  VGGGGGGGAQKLTTN-------------DALAYLKAVKDIFQDKREKYDDFLEVMKDFKA 78
           +  GGGGG  K   N             DAL+YL  VK  F      Y  FLE+MK+FK+
Sbjct: 1   MATGGGGGNCKPNPNWTKPQEKLPVHVEDALSYLDQVKIRFGSDPATYSGFLEIMKEFKS 60

Query: 79  QRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLP--------------------- 117
           Q IDT GVI RV +LF  H DL+LGFN FLP GY+I LP                     
Sbjct: 61  QSIDTPGVIRRVSQLFHEHPDLMLGFNAFLPLGYKIELPKNGKVVVQTSLASPVSSDATT 120

Query: 118 -----------------------------LEDEQPPPK-KPVEFEEAINFVNKIKTRFQG 147
                                         E  +PPP+ + +EF  AI++VNKIKTR+  
Sbjct: 121 SSLSSSHVIVPPIPENVLSEVPEESRQQEKEKPRPPPESESLEFHNAISYVNKIKTRYLD 180

Query: 148 DDHVYKSFLDILNMYRKEN----------KSITEVYQEVEALFQDHPDLLEEFTHFLPDS 197
              +Y+SFL+IL+ Y+K+            S  EV+ EV +LF+   DLL EF  FLP++
Sbjct: 181 RPEIYRSFLEILHTYQKDQLNPKGRPFRGMSEEEVFTEVASLFRGQEDLLSEFGQFLPEA 240



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/67 (41%), Positives = 41/67 (61%), Gaps = 2/67 (2%)

Query: 351 QELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGF 408
           QE SF  KV+  L++   Y+ FLRC+ L+ +E+++ SEL  LV   LG++P+L   F  F
Sbjct: 306 QEFSFFNKVRRVLKNQEVYENFLRCIALFNQELVSGSELLQLVTPFLGKFPELFAQFKSF 365

Query: 409 LARCEKS 415
           L   E S
Sbjct: 366 LGVKELS 372


>gi|359066803|ref|XP_003586291.1| PREDICTED: paired amphipathic helix protein Sin3b-like [Bos taurus]
          Length = 1122

 Score =  192 bits (487), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 123/354 (34%), Positives = 185/354 (52%), Gaps = 30/354 (8%)

Query: 498 QELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKN 557
           +E+D ++C+R   SYR LPK Y  P  S RT +  EVLND WVS  S SED +F   +K 
Sbjct: 383 REIDYASCKRIGSSYRALPKTYQQPKCSGRTAICKEVLNDTWVSFPSWSEDSTFVSSKKT 442

Query: 558 QYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TA 613
            YEE L RCED+RFELD++LE+   T + +E + +K++    +     R++D        
Sbjct: 443 PYEEQLHRCEDERFELDVVLETNLATIRVLESVQKKLSRMAPEDQEKFRLDDCLGGTSEV 502

Query: 614 LNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSK 673
           +  R I R+YGD   ++++ L+KN   A+PV+L RLK K+EEW   +  FNK+W E Y K
Sbjct: 503 IQRRAIHRIYGDKAPEIIESLKKNPVTAVPVVLKRLKAKEEEWREAQQGFNKIWREQYEK 562

Query: 674 NYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLE 733
            Y KSLDH++  FKQ D+K+L +K+L  EI+ + ++ +++          +  S  PHL 
Sbjct: 563 AYLKSLDHQAVNFKQNDTKALRSKSLLNEIESVYDEHQEQHS-----EGRSAPSSEPHLI 617

Query: 734 FEYSDPDIHEDLYQLIKYSCGEMCTTEQLDK--VMKIWTTFLEPMLGVPSRPQGA-EDTE 790
           F Y D  I ED   LI Y        ++ D+  + ++   F+  +        GA ED+ 
Sbjct: 618 FVYEDRQILEDAAALISYYVKRQPAIQKEDQGTIHQLVHQFVPSLFFSQQLDLGASEDSA 677

Query: 791 DVVKAKSHTVKSRAASVGDSDGSPDGDAAAMTSKHSNPSRNGDESIPPEQSSSS 844
           D                 +   SP G AA        P+  G +S PPE+  ++
Sbjct: 678 D-----------------EGRASPQGQAADPGGDRKKPA-PGPQSSPPEEKGAA 713



 Score =  142 bits (359), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 91/228 (39%), Positives = 115/228 (50%), Gaps = 47/228 (20%)

Query: 33  GGGGGGGAQKLTTN--DALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARV 90
           G  G GG +KL  +  DAL YL  VK  F      Y+ FLE+MK+FK+Q IDT GVI RV
Sbjct: 23  GRSGSGGHEKLPVHVEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRV 82

Query: 91  KELFKGHRDLILGFNTFLPKGYEITLP----LEDEQP----------------------- 123
            +LF  H DLI+GFN FLP GY I +P    L  + P                       
Sbjct: 83  SQLFHEHPDLIVGFNAFLPLGYRIDIPKNGKLNIQSPLSSQENSHSHSDCAESVKQQTLY 142

Query: 124 ---PPKKP-----VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSIT----- 170
               P+ P     VEF  AI++VNKIKTRF     +Y+SFL+IL+ Y+KE  S       
Sbjct: 143 KEDKPQVPLESDSVEFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLSTKGRPFR 202

Query: 171 -----EVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSI 213
                EV+ EV  LF+   DLL EF  FLP++  +      P   NS+
Sbjct: 203 GMSEEEVFTEVANLFRGQEDLLSEFGQFLPEAKRSLFTGNGPCEMNSV 250



 Score = 60.1 bits (144), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 40/62 (64%), Gaps = 2/62 (3%)

Query: 351 QELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGF 408
           QE SF +KV+  L+    Y+ FLRC+ L+ +E+++ SEL  LVG  LG++P+L   F  F
Sbjct: 302 QEFSFFDKVRRVLKSQEVYENFLRCIALFNQELVSGSELLQLVGPFLGKFPELFAQFKSF 361

Query: 409 LA 410
           L 
Sbjct: 362 LG 363


>gi|50510595|dbj|BAD32283.1| mKIAA0700 protein [Mus musculus]
          Length = 1101

 Score =  192 bits (487), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 111/300 (37%), Positives = 170/300 (56%), Gaps = 11/300 (3%)

Query: 498 QELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKN 557
           +E+D ++C+R   SYR LPK Y  P  S RT +  EVLND WVS  S SED +F   +K 
Sbjct: 381 REIDYASCKRIGSSYRALPKTYQQPKCSGRTAICKEVLNDTWVSFPSWSEDSTFVSSKKT 440

Query: 558 QYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TA 613
            YEE L RCED+RFELD++LE+   T + +E + +K++    +    +R++D        
Sbjct: 441 PYEEQLHRCEDERFELDVVLETNLATIRVLESVQKKLSRMAPEDQEKLRLDDCLGGTSEV 500

Query: 614 LNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSK 673
           +  R I R+YGD   +V++ L++N + A+PV+L RLK K+EEW   +  FNK+W E Y K
Sbjct: 501 IQRRAIHRIYGDKAPEVIESLKRNPATAVPVVLKRLKAKEEEWREAQQGFNKIWREQYEK 560

Query: 674 NYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLE 733
            Y KSLDH++  FKQ D+K+L +K+L  EI+ + ++ +++          +  S  PHL 
Sbjct: 561 AYLKSLDHQAVNFKQNDTKALRSKSLLNEIESVYDEHQEQHS-----EGRSAPSSEPHLI 615

Query: 734 FEYSDPDIHEDLYQLIKYSCGEMCTTEQLDK--VMKIWTTFLEPMLGVPSRPQGAEDTED 791
           F Y D  I ED   LI Y        ++ D+  + ++   FL  +      P  ++D+ D
Sbjct: 616 FVYEDRQILEDAAALISYYVKRQPAIQKEDQGTIRQLLHRFLPSLFFSQQCPGTSDDSAD 675



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 87/211 (41%), Positives = 108/211 (51%), Gaps = 46/211 (21%)

Query: 33  GGGGGGGAQKLTTN--DALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARV 90
           G  G GG +KL  +  DAL YL  VK  F      Y+ FLE+MK+FK+Q IDT GVI RV
Sbjct: 23  GRSGSGGHEKLPVHVEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRV 82

Query: 91  KELFKGHRDLILGFNTFLPKGYEITLPL-------------------------------- 118
            +LF  H DLI+GFN FLP GY I +P                                 
Sbjct: 83  SQLFHEHPDLIVGFNAFLPLGYRIDIPKNGKLNIQSPLSSQDNSHSHGDCGEDFKQMSYK 142

Query: 119 ED--EQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKEN---------- 166
           ED  + P     VEF  AI++VNKIKTRF     +Y+SFL+IL+ Y+KE           
Sbjct: 143 EDRGQVPLESDSVEFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLHTKGRPFRG 202

Query: 167 KSITEVYQEVEALFQDHPDLLEEFTHFLPDS 197
            S  EV+ EV  LF+   DLL EF  FLP++
Sbjct: 203 MSEEEVFTEVANLFRGQEDLLSEFGQFLPEA 233



 Score = 57.8 bits (138), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 5/79 (6%)

Query: 351 QELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGF 408
           QE SF +KV+  L+    Y+ FLRC+ L+ +E+++ SEL  LV   LG++P+L   F  F
Sbjct: 300 QEFSFFDKVRRVLKSQEVYENFLRCIALFNQELVSGSELLQLVSPFLGKFPELFAQFKSF 359

Query: 409 LARCEKSEELLADVMSKKS 427
           L   E S    A  MS +S
Sbjct: 360 LGVKELS---FAPPMSDRS 375


>gi|410950828|ref|XP_003982105.1| PREDICTED: paired amphipathic helix protein Sin3b [Felis catus]
          Length = 943

 Score =  192 bits (487), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 124/355 (34%), Positives = 189/355 (53%), Gaps = 33/355 (9%)

Query: 498 QELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKN 557
           +E+D ++C+R   SYR LPK Y  P  S RT +  EVLND WVS  S SED +F   +K 
Sbjct: 347 REIDYASCKRIGSSYRALPKTYQQPKCSGRTAICKEVLNDTWVSFPSWSEDSTFVSSKKT 406

Query: 558 QYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TA 613
            YEE L RCED+RFELD++LE+   T + +E + +K++    +     R++D        
Sbjct: 407 PYEEQLHRCEDERFELDVVLETNLATIRVLESVQKKLSRMAPEDQEKFRLDDCLGGTSEV 466

Query: 614 LNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSK 673
           +  R I R+YGD   ++++ L+KN   A+PV+L RLK K+EEW   +  FNK+W E Y K
Sbjct: 467 IQRRAIHRIYGDKAPEIIESLKKNPVTAVPVVLKRLKAKEEEWREAQQGFNKIWREQYEK 526

Query: 674 NYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLE 733
            Y KSLDH++  FKQ D+K+L +K+L  EI+ + ++ +++          +  S  PHL 
Sbjct: 527 AYLKSLDHQAVNFKQNDTKALRSKSLLNEIESVYDEHQEQHS-----EGRSAPSSEPHLV 581

Query: 734 FEYSDPDIHEDLYQLIKYSCGEMCTTEQLDK--VMKIWTTFLEPMLGVPSR--PQGAEDT 789
           F Y D  I ED   LI Y        ++ D+  + ++   F+ P L    +  P  +ED+
Sbjct: 582 FVYEDRQILEDAAALISYYVKRQPAIQKEDQGTIHQLVHQFV-PSLFFSQQLDPGASEDS 640

Query: 790 EDVVKAKSHTVKSRAASVGDSDGSPDGDAAAMTSKHSNPSRNGDESIPPEQSSSS 844
            D                 +  GSP G +A    +   P+  G +S PPE+  ++
Sbjct: 641 AD-----------------EGRGSPQGQSAEPGDR-KKPA-PGPQSGPPEEKGAA 676



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 70/189 (37%), Positives = 91/189 (48%), Gaps = 46/189 (24%)

Query: 70  LEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPL----------- 118
           L V+++ K   IDT GVI RV +LF  H DLI+GFN FLP GY I +P            
Sbjct: 27  LVVLRE-KLVSIDTPGVIRRVSQLFHEHPDLIVGFNAFLPLGYRIDIPKNGKLNIQSPLS 85

Query: 119 ----------------------EDEQPPPKKP--VEFEEAINFVNKIKTRFQGDDHVYKS 154
                                 ED+   P +   VEF  AI++VNKIKTRF     +Y+S
Sbjct: 86  SQENSHNHSDCTENFKQQMLYKEDKAQVPLESDSVEFNNAISYVNKIKTRFLDHPEIYRS 145

Query: 155 FLDILNMYRKENKSIT----------EVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIH 204
           FL+IL+ Y+KE  S            EV+ EV  LF+   DLL EF  FLP++  +    
Sbjct: 146 FLEILHTYQKEQLSTKGRPFRGMSEEEVFTEVANLFRGQEDLLSEFGQFLPEAKRSLFTG 205

Query: 205 YVPSGRNSI 213
             P   NS+
Sbjct: 206 NGPCEMNSV 214



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 5/79 (6%)

Query: 351 QELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGF 408
           QE SF +KV+  L+    Y+ FLRC+ L+ +E+++ SEL  LV   LG++P+L   F  F
Sbjct: 266 QEFSFFDKVRRVLKSQEVYENFLRCIALFNQELVSGSELLQLVSPFLGKFPELFAQFKSF 325

Query: 409 LARCEKSEELLADVMSKKS 427
           L   E S    A  MS +S
Sbjct: 326 LGVKELS---FAPPMSDRS 341



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/218 (22%), Positives = 84/218 (38%), Gaps = 61/218 (27%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAG----------VIARVKELFK 95
           N+A++Y+  +K  F D  E Y  FLE++  ++ +++ T G          V   V  LF+
Sbjct: 123 NNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLSTKGRPFRGMSEEEVFTEVANLFR 182

Query: 96  GHRDLILGFNTFLPKG--------------------YEITLP----------LEDEQPPP 125
           G  DL+  F  FLP+                     +E  L           L     P 
Sbjct: 183 GQEDLLSEFGQFLPEAKRSLFTGNGPCEMNSVQKSEHEKNLEHSKKRSRPSLLRPVSAPA 242

Query: 126 KKPVEFE----------------EAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI 169
           KK ++                  +  +F +K++ R      VY++FL  + ++ +E  S 
Sbjct: 243 KKKMKLRGTKDLSIAAVGKYGTLQEFSFFDKVR-RVLKSQEVYENFLRCIALFNQELVSG 301

Query: 170 TEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVP 207
           +E+ Q V       P+L  +F  FL    G   + + P
Sbjct: 302 SELLQLVSPFLGKFPELFAQFKSFL----GVKELSFAP 335


>gi|164420770|ref|NP_033214.2| paired amphipathic helix protein Sin3b isoform 1 [Mus musculus]
 gi|68068042|sp|Q62141.2|SIN3B_MOUSE RecName: Full=Paired amphipathic helix protein Sin3b; AltName:
           Full=Histone deacetylase complex subunit Sin3b; AltName:
           Full=Transcriptional corepressor Sin3b
          Length = 1098

 Score =  192 bits (487), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 111/300 (37%), Positives = 170/300 (56%), Gaps = 11/300 (3%)

Query: 498 QELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKN 557
           +E+D ++C+R   SYR LPK Y  P  S RT +  EVLND WVS  S SED +F   +K 
Sbjct: 378 REIDYASCKRIGSSYRALPKTYQQPKCSGRTAICKEVLNDTWVSFPSWSEDSTFVSSKKT 437

Query: 558 QYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TA 613
            YEE L RCED+RFELD++LE+   T + +E + +K++    +    +R++D        
Sbjct: 438 PYEEQLHRCEDERFELDVVLETNLATIRVLESVQKKLSRMAPEDQEKLRLDDCLGGTSEV 497

Query: 614 LNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSK 673
           +  R I R+YGD   +V++ L++N + A+PV+L RLK K+EEW   +  FNK+W E Y K
Sbjct: 498 IQRRAIHRIYGDKAPEVIESLKRNPATAVPVVLKRLKAKEEEWREAQQGFNKIWREQYEK 557

Query: 674 NYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLE 733
            Y KSLDH++  FKQ D+K+L +K+L  EI+ + ++ +++          +  S  PHL 
Sbjct: 558 AYLKSLDHQAVNFKQNDTKALRSKSLLNEIESVYDEHQEQHS-----EGRSAPSSEPHLI 612

Query: 734 FEYSDPDIHEDLYQLIKYSCGEMCTTEQLDK--VMKIWTTFLEPMLGVPSRPQGAEDTED 791
           F Y D  I ED   LI Y        ++ D+  + ++   FL  +      P  ++D+ D
Sbjct: 613 FVYEDRQILEDAAALISYYVKRQPAIQKEDQGTIRQLLHRFLPSLFFSQQCPGTSDDSAD 672



 Score =  138 bits (348), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 87/211 (41%), Positives = 108/211 (51%), Gaps = 46/211 (21%)

Query: 33  GGGGGGGAQKLTTN--DALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARV 90
           G  G GG +KL  +  DAL YL  VK  F      Y+ FLE+MK+FK+Q IDT GVI RV
Sbjct: 20  GRSGSGGHEKLPVHVEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRV 79

Query: 91  KELFKGHRDLILGFNTFLPKGYEITLPL-------------------------------- 118
            +LF  H DLI+GFN FLP GY I +P                                 
Sbjct: 80  SQLFHEHPDLIVGFNAFLPLGYRIDIPKNGKLNIQSPLSSQDNSHSHGDCGEDFKQMSYK 139

Query: 119 ED--EQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKEN---------- 166
           ED  + P     VEF  AI++VNKIKTRF     +Y+SFL+IL+ Y+KE           
Sbjct: 140 EDRGQVPLESDSVEFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLHTKGRPFRG 199

Query: 167 KSITEVYQEVEALFQDHPDLLEEFTHFLPDS 197
            S  EV+ EV  LF+   DLL EF  FLP++
Sbjct: 200 MSEEEVFTEVANLFRGQEDLLSEFGQFLPEA 230



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 5/79 (6%)

Query: 351 QELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGF 408
           QE SF +KV+  L+    Y+ FLRC+ L+ +E+++ SEL  LV   LG++P+L   F  F
Sbjct: 297 QEFSFFDKVRRVLKSQEVYENFLRCIALFNQELVSGSELLQLVSPFLGKFPELFAQFKSF 356

Query: 409 LARCEKSEELLADVMSKKS 427
           L   E S    A  MS +S
Sbjct: 357 LGVKELS---FAPPMSDRS 372


>gi|122937775|gb|ABM68612.1| AAEL014711-PA [Aedes aegypti]
          Length = 1716

 Score =  192 bits (487), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 127/404 (31%), Positives = 202/404 (50%), Gaps = 73/404 (18%)

Query: 352  ELSFCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFL 409
            + +F +KV+  LR  D Y+ FLRCL L+ +EI+++SELQ+LV                FL
Sbjct: 680  DYAFFDKVRKALRSPDVYENFLRCLTLFNQEIVSKSELQTLV--------------TPFL 725

Query: 410  ARCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRLD 469
            +R     +   D +   +      +P+ V +    R +DR + +   D            
Sbjct: 726  SRFPDLLKWFQDFLGPST------VPECVPLASAQR-QDRSQSELATD------------ 766

Query: 470  KSVAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTE 529
                                          +DLS C+R   SY  LPK++     S RT 
Sbjct: 767  ------------------------------IDLSTCKRLGASYCALPKSHENVKCSGRTA 796

Query: 530  LGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEE 589
            L  +VLND WVS  + +ED +F   RK QYEE ++RCED+RFELD+++E+ + T + +E 
Sbjct: 797  LCRDVLNDTWVSFPTWAEDSTFVTSRKTQYEEFIYRCEDERFELDVVIETNSATIRVLEG 856

Query: 590  LLEKINNNTIKTDGPIRVEDHF----TALNLRCIERLYGDHGLDVMDVLRKNASLALPVI 645
            + +K++  +       R+++        ++ R ++R+YGD   D++  LRKN  +A+PV+
Sbjct: 857  VQKKLSRMSQDEVSRFRLDECLGGTSATIHQRALKRIYGDKANDIIQGLRKNPVVAVPVV 916

Query: 646  LTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKE 705
            L RLK K+EEW   +  FNK W E   K Y KSLDH+   FKQ D K+L +K+L  EI+ 
Sbjct: 917  LRRLKAKEEEWREAQKGFNKQWREQNEKYYLKSLDHQGINFKQNDIKALRSKSLFNEIET 976

Query: 706  ISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLI 749
            + +++ ++ +      + N  +  PHL   Y D  I +D   L+
Sbjct: 977  LFDERHEQTE----DGSSNPLTSGPHLVLPYKDKTILDDAANLL 1016



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 44/80 (55%), Positives = 59/80 (73%)

Query: 42  KLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLI 101
           +L   DAL+YL  VK  F ++ + Y+DFL++MK+FK+Q IDT GVI RV  LFKGH +LI
Sbjct: 188 RLKVEDALSYLDQVKFRFGNQPQVYNDFLDIMKEFKSQSIDTPGVIQRVSNLFKGHPELI 247

Query: 102 LGFNTFLPKGYEITLPLEDE 121
           +GFNTFLP GY+I +   D+
Sbjct: 248 VGFNTFLPPGYKIEVQANDQ 267



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/97 (42%), Positives = 52/97 (53%), Gaps = 17/97 (17%)

Query: 125 PKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENK----------------- 167
           P +PVEF  AI +VNKIK RF      YK FL+IL+ Y+KE K                 
Sbjct: 428 PNQPVEFNHAITYVNKIKNRFHSQPEKYKRFLEILHTYQKEQKIHKEGTQGACNSGAKQL 487

Query: 168 SITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIH 204
           +  EVY +V  LF +  DLL EF  FLPD++  A +H
Sbjct: 488 TEAEVYTQVAKLFDNQEDLLREFGQFLPDATSHAPMH 524



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 41/67 (61%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           ++ E+A+++++++K RF     VY  FLDI+  ++ ++     V Q V  LF+ HP+L+ 
Sbjct: 189 LKVEDALSYLDQVKFRFGNQPQVYNDFLDIMKEFKSQSIDTPGVIQRVSNLFKGHPELIV 248

Query: 189 EFTHFLP 195
            F  FLP
Sbjct: 249 GFNTFLP 255



 Score = 43.9 bits (102), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 17/92 (18%)

Query: 35  GGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFK----------------- 77
           G     Q +  N A+ Y+  +K+ F  + EKY  FLE++  ++                 
Sbjct: 424 GNAQPNQPVEFNHAITYVNKIKNRFHSQPEKYKRFLEILHTYQKEQKIHKEGTQGACNSG 483

Query: 78  AQRIDTAGVIARVKELFKGHRDLILGFNTFLP 109
           A+++  A V  +V +LF    DL+  F  FLP
Sbjct: 484 AKQLTEAEVYTQVAKLFDNQEDLLREFGQFLP 515


>gi|74186677|dbj|BAE34795.1| unnamed protein product [Mus musculus]
          Length = 1098

 Score =  192 bits (487), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 111/300 (37%), Positives = 170/300 (56%), Gaps = 11/300 (3%)

Query: 498 QELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKN 557
           +E+D ++C+R   SYR LPK Y  P  S RT +  EVLND WVS  S SED +F   +K 
Sbjct: 378 REIDYASCKRIGSSYRALPKTYQQPKCSGRTAICKEVLNDTWVSFPSWSEDSTFVSSKKT 437

Query: 558 QYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TA 613
            YEE L RCED+RFELD++LE+   T + +E + +K++    +    +R++D        
Sbjct: 438 PYEEQLHRCEDERFELDVVLETNLATIRVLESVQKKLSRMAPEDQEKLRLDDCLGGTSEV 497

Query: 614 LNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSK 673
           +  R I R+YGD   +V++ L++N + A+PV+L RLK K+EEW   +  FNK+W E Y K
Sbjct: 498 IQRRAIHRIYGDKAPEVIESLKRNPATAVPVVLKRLKAKEEEWREAQQGFNKIWREQYEK 557

Query: 674 NYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLE 733
            Y KSLDH++  FKQ D+K+L +K+L  EI+ + ++ +++          +  S  PHL 
Sbjct: 558 AYLKSLDHQAVNFKQNDTKALRSKSLLNEIESVYDEHQEQHS-----EGRSAPSSEPHLI 612

Query: 734 FEYSDPDIHEDLYQLIKYSCGEMCTTEQLDK--VMKIWTTFLEPMLGVPSRPQGAEDTED 791
           F Y D  I ED   LI Y        ++ D+  + ++   FL  +      P  ++D+ D
Sbjct: 613 FVYEDRQILEDAAALISYYVKRQPAIQKEDQGTIRQLLHRFLPSLFFSQQCPGTSDDSAD 672



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 87/211 (41%), Positives = 108/211 (51%), Gaps = 46/211 (21%)

Query: 33  GGGGGGGAQKLTTN--DALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARV 90
           G  G GG +KL  +  DAL YL  VK  F      Y+ FLE+MK+FK+Q IDT GVI RV
Sbjct: 20  GRSGSGGHEKLPVHVEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRV 79

Query: 91  KELFKGHRDLILGFNTFLPKGYEITLPL-------------------------------- 118
            +LF  H DLI+GFN FLP GY I +P                                 
Sbjct: 80  SQLFHEHPDLIVGFNAFLPLGYRIDIPKNGKLNIQSPLSSQDNSHSHGDCGEDFKQMSYK 139

Query: 119 ED--EQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKEN---------- 166
           ED  + P     VEF  AI++VNKIKTRF     +Y+SFL+IL+ Y+KE           
Sbjct: 140 EDRGQVPLESDSVEFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLHTKGRPFRG 199

Query: 167 KSITEVYQEVEALFQDHPDLLEEFTHFLPDS 197
            S  EV+ EV  LF+   DLL EF  FLP++
Sbjct: 200 MSEEEVFTEVANLFRGQEDLLSEFGQFLPEA 230



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 5/79 (6%)

Query: 351 QELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGF 408
           QE SF +KV+  L+    Y+ FLRC+ L+ +E+++ SEL  LV   LG++P+L   F  F
Sbjct: 297 QEFSFFDKVRRVLKSQEVYENFLRCIALFNQELVSGSELLQLVSPFLGKFPELFAQFKSF 356

Query: 409 LARCEKSEELLADVMSKKS 427
           L   E S    A  MS +S
Sbjct: 357 LGVKELS---FAPPMSDRS 372


>gi|355719436|gb|AES06600.1| SIN3-like protein B, transcription regulator [Mustela putorius
           furo]
          Length = 819

 Score =  192 bits (487), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 125/354 (35%), Positives = 185/354 (52%), Gaps = 33/354 (9%)

Query: 498 QELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKN 557
           +E+D ++C+R   SYR LPK Y  P  S RT +  EVLND WVS  S SED +F   +K 
Sbjct: 347 REIDYASCKRIGSSYRALPKTYQQPKCSGRTAICKEVLNDTWVSFPSWSEDSTFVSSKKT 406

Query: 558 QYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TA 613
            YEE L RCED+RFELD++LE+   T + +E + +K++    +     R++D        
Sbjct: 407 PYEEQLHRCEDERFELDVVLETNLATIRVLESVQKKLSRMAPEDQEKFRLDDCLGGTSEV 466

Query: 614 LNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSK 673
           +  R I R+YGD   ++++ L+KN   A+PV+L RLK K+EEW   +  FNK+W E Y K
Sbjct: 467 IQRRAIHRIYGDKAPEIIESLKKNPVTAVPVVLKRLKAKEEEWREAQQGFNKIWREQYEK 526

Query: 674 NYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLE 733
            Y KSLDH++  FKQ D+K+L +K+L  EI+ + ++ +++          +  S  PHL 
Sbjct: 527 AYLKSLDHQAVNFKQNDTKALRSKSLLNEIESVYDEHQEQHS-----EGRSAPSSEPHLI 581

Query: 734 FEYSDPDIHEDLYQLIKYSCGEMCTTEQLDK--VMKIWTTFLEPMLGVPSRPQGA-EDTE 790
           F Y D  I ED   LI Y        ++ D+  + ++   F+  +        GA ED+ 
Sbjct: 582 FVYEDRQILEDAAALISYYVKRQPAIQKEDQGTIHQLVHQFVPSLFFSQQLDLGASEDSA 641

Query: 791 DVVKAKSHTVKSRAASVGDSDGSPDGDAA-AMTSKHSNPSRNGDESIPPEQSSS 843
           D                 +  GSP G  A A   K   P   G +S PPE+  +
Sbjct: 642 D-----------------EGRGSPQGQGADAGDRKKPAP---GPQSSPPEEKGA 675



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 85/214 (39%), Positives = 107/214 (50%), Gaps = 45/214 (21%)

Query: 45  TNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGF 104
             DAL YL  VK  F      Y+ FLE+MK+FK+Q IDT GVI RV +LF  H DLI+GF
Sbjct: 1   VEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRVSQLFHEHPDLIVGF 60

Query: 105 NTFLPKGYEITLP----LEDEQP--------------------------PPKKP-----V 129
           N FLP GY I +P    L  + P                           P+ P     V
Sbjct: 61  NAFLPLGYRIDIPKNGKLNIQSPLSSQENSHNHSDCAENFKPQMLYKEDKPQVPLESDSV 120

Query: 130 EFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSIT----------EVYQEVEAL 179
           EF  AI++VNKIKTRF     +Y+SFL+IL+ Y+KE  S            EV+ EV  L
Sbjct: 121 EFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLSTKGRPFRGMSEEEVFTEVANL 180

Query: 180 FQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSI 213
           F+   DLL EF  FLP++  +      P   NS+
Sbjct: 181 FRGQEDLLSEFGQFLPEAKRSLFTGNGPCEMNSV 214



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 5/79 (6%)

Query: 351 QELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGF 408
           QE SF +KV+  L+    Y+ FLRC+ L+ +E+++ SEL  LV   LG++P+L   F  F
Sbjct: 266 QEFSFFDKVRRVLKSQEVYENFLRCIALFNQELVSGSELLQLVSPFLGKFPELFAQFKSF 325

Query: 409 LARCEKSEELLADVMSKKS 427
           L   E S    A  MS +S
Sbjct: 326 LGVKELS---FAPPMSDRS 341


>gi|403303538|ref|XP_003942383.1| PREDICTED: paired amphipathic helix protein Sin3b, partial [Saimiri
           boliviensis boliviensis]
          Length = 1098

 Score =  191 bits (485), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 106/258 (41%), Positives = 153/258 (59%), Gaps = 9/258 (3%)

Query: 498 QELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKN 557
           +E+D ++C+R   SYR LPK Y  P  S RT +  EVLND WVS  S SED +F   +K 
Sbjct: 355 REIDYASCKRIGSSYRALPKTYQQPKCSGRTAICKEVLNDTWVSFPSWSEDSTFVSSKKT 414

Query: 558 QYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TA 613
            YEE L RCED+RFELD++LE+   T + +E + +K++    +     R++D        
Sbjct: 415 PYEEQLHRCEDERFELDVVLETNLATIRVLESVQKKLSRMAPEDQEKFRLDDSLGGTSEV 474

Query: 614 LNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSK 673
           +  R I R+YGD   ++++ L+KN   A+PV+L RLK K+EEW   +  FNK+W E Y K
Sbjct: 475 IQRRAIHRIYGDKAPEIIESLKKNPVTAVPVVLKRLKAKEEEWREAQQGFNKIWREQYEK 534

Query: 674 NYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLE 733
            Y KSLDH++  FKQ D+K+L +K+L  EI+ + ++ +++        A +  S  PHL 
Sbjct: 535 AYLKSLDHQAVNFKQNDTKALRSKSLLNEIESVYDEHQEQHS-----EARSAPSSEPHLI 589

Query: 734 FEYSDPDIHEDLYQLIKY 751
           F Y D  I ED   LI Y
Sbjct: 590 FVYEDRQILEDAAALISY 607



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 96/264 (36%), Positives = 130/264 (49%), Gaps = 56/264 (21%)

Query: 39  GAQKLTTN--DALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKG 96
           G +KL  +  DAL YL  VK  F      Y+ FLE+MK+FK+Q IDT GVI RV +LF  
Sbjct: 1   GHEKLPVHVEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRVSQLFHE 60

Query: 97  HRDLILGFNTFLPKGYEITLP-----------------------LED--EQPP-----PK 126
           H DLI+GFN FLP GY I +P                        ED  +Q P     P+
Sbjct: 61  HPDLIVGFNAFLPLGYRIDIPKNGKLNIQSPLTCQENSHNHGDCAEDFKQQVPYKEDKPQ 120

Query: 127 KP-----VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKEN----------KSITE 171
            P     VEF  AI++VNKIKTRF     +Y+SFL+IL+ Y+KE            S  E
Sbjct: 121 VPLESDSVEFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLNTRGRPFRGMSEEE 180

Query: 172 VYQEVEALFQDHPDLLEEFTHFLPDS-------SGAASIHYVPSGRN--SILRDRSSAMP 222
           V+ EV  LF+   DLL EF  FLP++       +G   +H V    +  ++   R  + P
Sbjct: 181 VFTEVANLFRGQEDLLSEFGQFLPEAKRSLFTGNGPCEMHTVQKSEHDKTLEHSRKRSRP 240

Query: 223 TARQVHVDKKERAMASHADRDLSV 246
           +  +      ++ M     +DLS+
Sbjct: 241 SLLRPVSAPAKKKMKLRGTKDLSI 264



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 5/79 (6%)

Query: 351 QELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGF 408
           QE SF +KV+  L+    Y+ FLRC+ L+ +E+++ SEL  LV   LG++P+L   F  F
Sbjct: 274 QEFSFFDKVRRVLKSQEVYENFLRCIALFNQELVSGSELLQLVSPFLGKFPELFAQFKSF 333

Query: 409 LARCEKSEELLADVMSKKS 427
           L   E S    A  MS +S
Sbjct: 334 LGVKELS---FAPPMSDRS 349


>gi|47225917|emb|CAF98397.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1323

 Score =  191 bits (485), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 169/287 (58%), Gaps = 15/287 (5%)

Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQ 558
           E+D ++C+R   SYR LPK+Y  P  + RT L  EVLND WVS  S SED +F   +K Q
Sbjct: 573 EIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVSSKKTQ 632

Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TAL 614
           YEE ++RCED+RFELD++LE+     + +E +  K++  + +    +R+++        +
Sbjct: 633 YEEHIYRCEDERFELDVVLETNLAAIRALETVQRKLSRMSAEEQAKLRLDNALGGSSEVI 692

Query: 615 NLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKN 674
           + + I+R+YGD   D++D L+KN ++++P++L RLK K+EEW   +  FNK+W E   K 
Sbjct: 693 HRKAIQRIYGDKAPDIIDGLKKNPAVSVPIVLKRLKTKEEEWREAQRGFNKIWREQNEKY 752

Query: 675 YHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIV--PHL 732
           Y KSLDH+   FKQ D+K L +K+L  EI+ I ++++++       A+    S +  PHL
Sbjct: 753 YLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQ-------ASEENASPLSGPHL 805

Query: 733 EFEYSDPDIHEDLYQLIKYSCGEMCTTEQLD--KVMKIWTTFLEPML 777
              Y D  I ED   LI +      + ++ D  K+ +I   F+  ML
Sbjct: 806 TLAYEDSQILEDAAALIIHHVKRQTSIQKDDKYKIKQIIYHFIPDML 852



 Score =  106 bits (265), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 96/335 (28%), Positives = 147/335 (43%), Gaps = 94/335 (28%)

Query: 117 PLEDEQP-------PP---KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKEN 166
           P++  QP       PP    +PVEF  AIN+VNKIK RFQG   +YK+FL+IL+ Y+KE 
Sbjct: 280 PMQLHQPLSGTPTGPPIQNNQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQ 339

Query: 167 KSI-------------TEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSI 213
           ++               EVY +V  LF++  DLL EF  FLPD++            NS+
Sbjct: 340 RNAKEAGGNYTPALTEQEVYAQVARLFKNQEDLLSEFGQFLPDAN------------NSV 387

Query: 214 LRDRSSAMPTARQVHVDKKERAMASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERE 273
           +   ++  PT+  V      RA+   A       RP       LL      +   EK   
Sbjct: 388 VGRAATPSPTSASV-----LRALPKIA----FTYRPQ------LLN-----KTTAEKAES 427

Query: 274 RRDDH-----RRERERDDRDFENDVNRDFSMQRFP--------HKRKSARKIEDSTAEPL 320
            R+DH     + +     R  +N       ++R P         K+     ++DS+   +
Sbjct: 428 VRNDHGGTAKKLQLNNKQRPSQNGCQ----IRRHPTPGATPPVKKKPKLLNLKDSSVAEV 483

Query: 321 HQGGEGDENFGMHPVSSSYDDKNAMKSMFSQELSFCEKVKDKLRDDYQEFLRCLHLYTKE 380
            + G G E+     V      + A++S                 + Y  FLRCL ++ +E
Sbjct: 484 SKHGVGTESLFFEKV------RKALRSA----------------EAYDNFLRCLVIFNQE 521

Query: 381 IITRSELQSLVGDLLGRYPDLMDGFNGFLARCEKS 415
           +++R+EL  LV   LG++P+L + F  FL   E S
Sbjct: 522 VVSRAELVQLVLPFLGKFPELFNWFKNFLGYREMS 556



 Score =  102 bits (255), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 47/84 (55%), Positives = 62/84 (73%)

Query: 37  GGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKG 96
           G   Q+L   DAL+YL  VK  F ++ + Y+DFL++MK+FK+Q IDT GVI+RV +LFKG
Sbjct: 112 GQQFQRLKVEDALSYLDQVKLQFGNQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKG 171

Query: 97  HRDLILGFNTFLPKGYEITLPLED 120
           H DLI+GFNTFLP GY+I +   D
Sbjct: 172 HPDLIMGFNTFLPPGYKIEVQTND 195



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 40/67 (59%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           ++ E+A+++++++K +F     VY  FLDI+  ++ ++     V   V  LF+ HPDL+ 
Sbjct: 118 LKVEDALSYLDQVKLQFGNQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIM 177

Query: 189 EFTHFLP 195
            F  FLP
Sbjct: 178 GFNTFLP 184



 Score = 46.2 bits (108), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 49/110 (44%), Gaps = 17/110 (15%)

Query: 17  PMISSRGEPSGQTQVVGGGGGGGA----QKLTTNDALAYLKAVKDIFQDKREKYDDFLEV 72
           P  S R  P    Q + G   G      Q +  N A+ Y+  +K+ FQ + + Y  FLE+
Sbjct: 272 PYTSPRSPPMQLHQPLSGTPTGPPIQNNQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEI 331

Query: 73  MKDFKAQRIDT--AG-----------VIARVKELFKGHRDLILGFNTFLP 109
           +  ++ ++ +   AG           V A+V  LFK   DL+  F  FLP
Sbjct: 332 LHTYQKEQRNAKEAGGNYTPALTEQEVYAQVARLFKNQEDLLSEFGQFLP 381


>gi|395513693|ref|XP_003761057.1| PREDICTED: paired amphipathic helix protein Sin3b [Sarcophilus
           harrisii]
          Length = 1082

 Score =  191 bits (485), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 107/271 (39%), Positives = 158/271 (58%), Gaps = 9/271 (3%)

Query: 498 QELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKN 557
           +E+D ++C+R   SYR LPK Y  P  S RT +  EVLND WVS  S SED +F   +K 
Sbjct: 360 REIDYASCKRIGSSYRALPKTYQQPKCSGRTAICKEVLNDTWVSFPSWSEDSTFVSSKKT 419

Query: 558 QYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TA 613
            YEE L RCED+RFELD++LE+   T + +E + +K++  + +     R++D        
Sbjct: 420 PYEEQLHRCEDERFELDVVLETNLATIRVLESVQKKLSRMSPEDQEKFRLDDCLGGTSEV 479

Query: 614 LNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSK 673
           +  R I R+YGD   ++++ L+KN   A+PV+L RLK K+EEW   +  FNK+W E Y K
Sbjct: 480 IQRRAIYRIYGDKAPEIIESLKKNPVTAVPVVLKRLKAKEEEWREAQQGFNKIWREQYEK 539

Query: 674 NYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLE 733
            Y KSLDH++  FKQ D+K+L +K+L  EI+ + ++ +++          N  +  PHL 
Sbjct: 540 AYLKSLDHQAVNFKQNDTKALRSKSLLNEIESVYDEHQEQHS-----EGRNAPTNEPHLI 594

Query: 734 FEYSDPDIHEDLYQLIKYSCGEMCTTEQLDK 764
           F Y D  I ED   LI Y      T ++ D+
Sbjct: 595 FVYEDKQILEDAASLISYYVKRQPTIQKEDQ 625



 Score =  133 bits (334), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 85/216 (39%), Positives = 107/216 (49%), Gaps = 45/216 (20%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
           L   DAL+YL  VK  F      Y+ FLE+MK+FK+Q IDT GVI RV +LF  H DLI+
Sbjct: 12  LQVEDALSYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRVSQLFHEHPDLIV 71

Query: 103 GFNTFLPKGYEITLPL---------------------------------EDEQPPPKKP- 128
           GFN FLP GY I +P                                  ED    P +  
Sbjct: 72  GFNAFLPLGYRIEIPKNGKLSIQAPLTSQENSHHRNDSADDYKQQLAYKEDRHQGPLESD 131

Query: 129 -VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKEN----------KSITEVYQEVE 177
            VEF  AI++VNKIKTRF     +Y+SFL+IL+ Y+KE            S  EV+ EV 
Sbjct: 132 SVEFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLNTKGRPFRGMSEEEVFTEVA 191

Query: 178 ALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSI 213
            LF+   DLL EF  FLP++  +      P   NS+
Sbjct: 192 NLFRGQEDLLSEFGQFLPEAKRSLFTGNGPCEMNSV 227



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 5/79 (6%)

Query: 351 QELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGF 408
           QE SF +KV+  L+    Y+ FLRC+ L+ +E+++ SEL  LV   LG++P+L   F  F
Sbjct: 279 QEFSFFDKVRRVLKSQEVYENFLRCIALFNQELVSGSELLQLVTPFLGKFPELFAQFKSF 338

Query: 409 LARCEKSEELLADVMSKKS 427
           L   E S    A  MS +S
Sbjct: 339 LGVKELS---FAPPMSDRS 354



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 42/71 (59%)

Query: 125 PKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHP 184
           P   ++ E+A+++++++K RF  D   Y  FL+I+  ++ ++     V + V  LF +HP
Sbjct: 8   PTVYLQVEDALSYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRVSQLFHEHP 67

Query: 185 DLLEEFTHFLP 195
           DL+  F  FLP
Sbjct: 68  DLIVGFNAFLP 78


>gi|363743915|ref|XP_418257.3| PREDICTED: paired amphipathic helix protein Sin3b [Gallus gallus]
          Length = 1251

 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 109/272 (40%), Positives = 159/272 (58%), Gaps = 11/272 (4%)

Query: 498 QELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKN 557
           +E+D ++C+R   SYR LPK Y  P  S RT +  EVLND WVS  S SED +F   +K 
Sbjct: 516 REIDYASCKRIGSSYRALPKTYQQPKCSGRTAICKEVLNDTWVSFPSWSEDSTFVSSKKT 575

Query: 558 QYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TA 613
            YEE L RCED+RFELD++LE+   T + +E + +K++  T +     R++D        
Sbjct: 576 PYEEQLHRCEDERFELDVVLETNLATIRVLESVQKKLSRLTQEDQEKFRLDDCLGGTSEV 635

Query: 614 LNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSK 673
           +  R I R+YGD   ++++ L+KN   A+PV+L RLK K+EEW   +  FNK+W E Y K
Sbjct: 636 IQRRAIYRIYGDKAPEIIESLKKNPVTAVPVVLKRLKAKEEEWREAQQGFNKIWREQYEK 695

Query: 674 NYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSI-VPHL 732
            Y KSLDH++  FKQ D+K+L +K+L  EI+ + ++ +++       + G   S   PHL
Sbjct: 696 AYLKSLDHQAVNFKQNDTKALRSKSLLNEIESVYDEHQEQH------SEGRSSSTNEPHL 749

Query: 733 EFEYSDPDIHEDLYQLIKYSCGEMCTTEQLDK 764
            F Y D  I ED   LI Y      T ++ D+
Sbjct: 750 IFIYEDKQILEDAASLISYYVKRQPTIQKEDQ 781



 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 87/244 (35%), Positives = 111/244 (45%), Gaps = 66/244 (27%)

Query: 36  GGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFK 95
           G   A +    DAL+YL  VK  F      Y+ FLE+MK+FK+Q IDT GVI RV +LF 
Sbjct: 140 GASAASRPQVEDALSYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRVSQLFH 199

Query: 96  GHRDLILGFNTFLPKGYEITLP----LEDEQP----PPKKPV------------------ 129
            H DLI+GFN FLP GY I +P    L  + P     P +PV                  
Sbjct: 200 EHPDLIVGFNAFLPLGYRIEIPKNGKLSIQSPLTSQVPSEPVPSALPGSGLLLHYSQENS 259

Query: 130 ------------------------------EFEEAINFVNKIKTRFQGDDHVYKSFLDIL 159
                                         EF  AI++VNKIKTRF     +Y+SFL+IL
Sbjct: 260 HNHSDCSEEFRHQLPYKEDKSQIPLESDSVEFNNAISYVNKIKTRFLDHPEIYRSFLEIL 319

Query: 160 NMYRKEN----------KSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSG 209
           + Y+KE            S  EV+ EV  LF+   DLL EF  FLP++  +      P  
Sbjct: 320 HTYQKEQLNTKGRPFRGMSEEEVFTEVANLFRGQEDLLSEFGQFLPEAKRSLFTGNGPCE 379

Query: 210 RNSI 213
            NS+
Sbjct: 380 VNSV 383



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 26/62 (41%), Positives = 39/62 (62%), Gaps = 2/62 (3%)

Query: 351 QELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGF 408
           QE SF +KV+  L+    Y+ FLRC+ L+ +E+++ SEL  LV   LG++P+L   F  F
Sbjct: 435 QEFSFFDKVRRVLKSQEVYENFLRCIALFNQELVSGSELLQLVTPFLGKFPELFAQFKSF 494

Query: 409 LA 410
           L 
Sbjct: 495 LG 496


>gi|345787637|ref|XP_852728.2| PREDICTED: paired amphipathic helix protein Sin3b [Canis lupus
           familiaris]
          Length = 1125

 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 124/350 (35%), Positives = 186/350 (53%), Gaps = 31/350 (8%)

Query: 498 QELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKN 557
           +E+D ++C+R   SYR LPK Y  P  S RT +  EVLND WVS  S SED +F   +K 
Sbjct: 387 REIDYASCKRIGSSYRALPKTYQQPKCSGRTAICKEVLNDTWVSFPSWSEDSTFVSSKKT 446

Query: 558 QYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TA 613
            YEE L RCED+RFELD++LE+   T + +E + +K++    +     R++D        
Sbjct: 447 PYEEQLHRCEDERFELDVVLETNLATIRVLESVQKKLSRMAPEDQEKFRLDDCLGGTSEV 506

Query: 614 LNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSK 673
           +  R I R+YGD   ++++ L+KN   A+PV+L RLK K+EEW   +  FNK+W E Y K
Sbjct: 507 IQRRAIHRIYGDKAPEIIESLKKNPVTAVPVVLKRLKAKEEEWREAQQGFNKIWREQYEK 566

Query: 674 NYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLE 733
            Y KSLDH++  FKQ D+K+L +K+L  EI+ + ++ +++          +  S  PHL 
Sbjct: 567 AYLKSLDHQAVNFKQNDTKALRSKSLLNEIESVYDEHQEQHS-----EGRSAPSSEPHLI 621

Query: 734 FEYSDPDIHEDLYQLIKYSCGEMCTTEQLDK--VMKIWTTFLEPMLGVPSRPQGA-EDTE 790
           F Y D  I ED   LI Y        ++ D+  + ++   F+  +        GA ED+ 
Sbjct: 622 FVYEDRQILEDAAALISYYVKRQPAIQKEDQGTIHQLVHQFVPSLFFSQQLDLGASEDSA 681

Query: 791 DVVKAKSHTVKSRAASVGDSDGSPDGDAAAMTSKHSNPSRNGDESIPPEQ 840
           D                 +S GSP G +A    +   P+  G +S PPE+
Sbjct: 682 D-----------------ESRGSPQGQSADPGDR-KKPA-PGPQSSPPEE 712



 Score =  140 bits (353), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 90/228 (39%), Positives = 114/228 (50%), Gaps = 47/228 (20%)

Query: 33  GGGGGGGAQKLTTN--DALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARV 90
           G  G  G +KL  +  DAL YL  VK  F      Y+ FLE+MK+FK+Q IDT GVI RV
Sbjct: 27  GRSGSAGHEKLPVHVEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRV 86

Query: 91  KELFKGHRDLILGFNTFLPKGYEITLP----LEDEQP----------------------- 123
            +LF  H DLI+GFN FLP GY I +P    L  + P                       
Sbjct: 87  SQLFHEHPDLIVGFNAFLPLGYRIDIPKNGKLNIQSPLSSQDSSHNHSDCAENFKQQMLY 146

Query: 124 ---PPKKP-----VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSIT----- 170
               P+ P     VEF  AI++VNKIKTRF     +Y+SFL+IL+ Y+KE  S       
Sbjct: 147 KEDKPQVPLESDSVEFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLSTKGRPFR 206

Query: 171 -----EVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSI 213
                EV+ EV  LF+   DLL EF  FLP++  +      P   NS+
Sbjct: 207 GMSEEEVFTEVANLFRGQEDLLSEFGQFLPEAKRSLFTGNGPCEMNSV 254



 Score = 58.2 bits (139), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 5/79 (6%)

Query: 351 QELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGF 408
           QE SF +KV+  L+    Y+ FLRC+ L+ +E+++ SEL  LV   LG++P+L   F  F
Sbjct: 306 QEFSFFDKVRRVLKSQEVYENFLRCIALFNQELVSGSELLQLVSPFLGKFPELFAQFKSF 365

Query: 409 LARCEKSEELLADVMSKKS 427
           L   E S    A  MS +S
Sbjct: 366 LGVKELS---FAPPMSDRS 381


>gi|348504406|ref|XP_003439752.1| PREDICTED: paired amphipathic helix protein Sin3b-like [Oreochromis
           niloticus]
          Length = 1213

 Score =  190 bits (483), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 110/275 (40%), Positives = 157/275 (57%), Gaps = 8/275 (2%)

Query: 498 QELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKN 557
           +E+D ++C+R   SYR LPK Y  P  S RT L  EVLND WVS  S SED +F   +K 
Sbjct: 446 REVDYASCKRLGSSYRALPKTYQQPKCSGRTALCKEVLNDTWVSFPSWSEDSTFVSSKKT 505

Query: 558 QYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TA 613
            YEE L RCED+RFELD++LE+   T + +E + +K++  + +     R++D        
Sbjct: 506 PYEEQLHRCEDERFELDVVLETNLATIRVLESVQKKLSRLSPEDQDRFRLDDCLGGTSEV 565

Query: 614 LNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSK 673
           +  R + R+YGD   ++++ L+++ + A+PV+L RLK K+EEW   +  FNK+W E Y K
Sbjct: 566 IQRRAVYRIYGDKAPEIIEGLKRSPATAVPVVLKRLKAKEEEWREAQQGFNKIWREQYEK 625

Query: 674 NYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEI----SEKKRKEDDVLLAIAAGNRRSIV 729
            Y KSLDH+   FKQ D K+L +K+L  EI+ I     E+  +E  V      G+  S  
Sbjct: 626 AYLKSLDHQGVNFKQNDMKALRSKSLLNEIESIYDERQEQSTEEGGVGQQSRNGSASSSE 685

Query: 730 PHLEFEYSDPDIHEDLYQLIKYSCGEMCTTEQLDK 764
           PH+ F Y D  I ED   LI Y      T  + DK
Sbjct: 686 PHMVFTYEDKQILEDAASLIIYHVKRQPTIHKDDK 720



 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 43/76 (56%), Positives = 53/76 (69%)

Query: 42  KLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLI 101
           KL   DAL+YL  VK  F +    Y+ FL++MK+FK+Q IDT GVI RV +LF GH DL+
Sbjct: 35  KLKVEDALSYLDQVKIRFANDPGIYNKFLDIMKEFKSQSIDTPGVINRVSQLFHGHPDLV 94

Query: 102 LGFNTFLPKGYEITLP 117
           LGFN FLP GY I +P
Sbjct: 95  LGFNAFLPPGYRIEVP 110



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 42/111 (37%), Positives = 60/111 (54%), Gaps = 27/111 (24%)

Query: 114 ITLPL---EDEQP-------PP---KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILN 160
           ++LPL   E + P       PP     PVEF+ AI++VNKIK RF     +Y++FL+IL+
Sbjct: 183 LSLPLTSRESQNPAATSSVSPPASETSPVEFDSAISYVNKIKNRFLDHPEIYRAFLEILH 242

Query: 161 MYRKENKSIT--------------EVYQEVEALFQDHPDLLEEFTHFLPDS 197
            Y+KE   +               EV+ +V +LF+   DLL EF  FLPD+
Sbjct: 243 TYQKEQLEVKESRGSRGSSGMTEDEVFSKVASLFKGQEDLLAEFGQFLPDA 293



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 40/67 (59%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           ++ E+A+++++++K RF  D  +Y  FLDI+  ++ ++     V   V  LF  HPDL+ 
Sbjct: 36  LKVEDALSYLDQVKIRFANDPGIYNKFLDIMKEFKSQSIDTPGVINRVSQLFHGHPDLVL 95

Query: 189 EFTHFLP 195
            F  FLP
Sbjct: 96  GFNAFLP 102



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 24/62 (38%), Positives = 40/62 (64%), Gaps = 2/62 (3%)

Query: 351 QELSFCEKVKD--KLRDDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGF 408
           +E SF +KV+   K ++ Y+ FLRC+ L+ +E+++ +EL  LV   LG++P+L   F  F
Sbjct: 363 REFSFFDKVRRLFKSQEVYENFLRCIALFNQEVVSGAELLQLVTPFLGKFPELYTQFKSF 422

Query: 409 LA 410
           L 
Sbjct: 423 LG 424



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 66/309 (21%), Positives = 111/309 (35%), Gaps = 86/309 (27%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRID---------TAG-----VIARVK 91
           + A++Y+  +K+ F D  E Y  FLE++  ++ ++++         ++G     V ++V 
Sbjct: 214 DSAISYVNKIKNRFLDHPEIYRAFLEILHTYQKEQLEVKESRGSRGSSGMTEDEVFSKVA 273

Query: 92  ELFKGHRDLILGFNTFLP-------KGYEIT-------------------------LPLE 119
            LFKG  DL+  F  FLP        G  +T                         + L+
Sbjct: 274 SLFKGQEDLLAEFGQFLPDAKRSLFTGSSLTGGKEQLKRTEEEDMITKQNKKRPRPILLQ 333

Query: 120 DEQPPPKKPVEFE----------------EAINFVNKIKTRFQGDDHVYKSFLDILNMYR 163
              P  KK +++                    +F +K++  F+  + VY++FL  + ++ 
Sbjct: 334 HMSPLLKKKMKYSCTKDQSFASVGKHGVLREFSFFDKVRRLFKSQE-VYENFLRCIALFN 392

Query: 164 KENKSITEVYQEVEALFQDHPDLLEEFTHFLPD----------------SSGAASIHYVP 207
           +E  S  E+ Q V       P+L  +F  FL D                  G   + Y  
Sbjct: 393 QEVVSGAELLQLVTPFLGKFPELYTQFKSFLGDKELSHAVSGLSDRYMEGGGGREVDYAS 452

Query: 208 SGRNSILRDRSSAMPTARQVHVDKKERAMASHADRDLSVDRPDPDHDRVLLKSDK----D 263
             R   L     A+P   Q        A+      D  V  P    D   + S K    +
Sbjct: 453 CKR---LGSSYRALPKTYQQPKCSGRTALCKEVLNDTWVSFPSWSEDSTFVSSKKTPYEE 509

Query: 264 QRRRGEKER 272
           Q  R E ER
Sbjct: 510 QLHRCEDER 518


>gi|149639127|ref|XP_001511618.1| PREDICTED: paired amphipathic helix protein Sin3b [Ornithorhynchus
           anatinus]
          Length = 1116

 Score =  190 bits (483), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 107/271 (39%), Positives = 158/271 (58%), Gaps = 9/271 (3%)

Query: 498 QELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKN 557
           +E+D ++C+R   SYR LPK Y  P  S RT +  EVLND WVS  S SED +F   +K 
Sbjct: 381 REIDYASCKRIGSSYRALPKTYQQPKCSGRTAICKEVLNDTWVSFPSWSEDSTFVSSKKT 440

Query: 558 QYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TA 613
            YEE L RCED+RFELD++LE+   T + +E + +K++  + +     R++D        
Sbjct: 441 PYEEQLHRCEDERFELDVVLETNLATIRVLESVQKKLSRMSPEDQEKFRLDDCLGGTSEV 500

Query: 614 LNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSK 673
           +  R I R+YGD   ++++ L+KN   A+PV+L RLK K+EEW   +  FNK+W E Y K
Sbjct: 501 IQRRAIYRIYGDKATEIIESLKKNPVTAVPVVLKRLKAKEEEWREAQQGFNKIWREQYEK 560

Query: 674 NYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLE 733
            Y KSLDH++  FKQ D+K+L +K+L  EI+ + ++ +++          N  +  PHL 
Sbjct: 561 AYLKSLDHQAVNFKQNDTKALRSKSLLNEIESVYDEHQEQHS-----EGRNGPNNEPHLI 615

Query: 734 FEYSDPDIHEDLYQLIKYSCGEMCTTEQLDK 764
           F Y D  I ED   LI Y      T ++ D+
Sbjct: 616 FVYEDKHILEDAASLISYYVKRQPTIQKEDQ 646



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 88/228 (38%), Positives = 114/228 (50%), Gaps = 47/228 (20%)

Query: 33  GGGGGGGAQKLTTN--DALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARV 90
           G  G    +KL  +  DAL+YL  VK  F      Y+ FLE+MK+FK+Q IDT GVI RV
Sbjct: 21  GRSGSAAQEKLPVHVEDALSYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRV 80

Query: 91  KELFKGHRDLILGFNTFLPKGYEITLP------------------------------LED 120
            +LF  H DLI+GFN FLP GY I +P                              L  
Sbjct: 81  SQLFHEHPDLIVGFNAFLPLGYRIEIPKNGKLNVQSSVANQENSHNHNDCSEDFKQQLPY 140

Query: 121 EQPPPKKP-----VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKEN--------- 166
           ++  P+ P     VEF  AI++VNKIKTRF     +Y+SFL+IL+ Y+KE          
Sbjct: 141 KEDKPQMPLESDSVEFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLNTKGRPFR 200

Query: 167 -KSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSI 213
             S  EV+ EV  LF+   DLL EF  FLP++  +      P   NS+
Sbjct: 201 GMSEEEVFTEVANLFRGQEDLLSEFGQFLPEAKRSLFTGNGPCEMNSL 248



 Score = 57.0 bits (136), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 26/62 (41%), Positives = 39/62 (62%), Gaps = 2/62 (3%)

Query: 351 QELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGF 408
           QE SF +KV+  L+    Y+ FLRC+ L+ +E+++ SEL  LV   LG++P+L   F  F
Sbjct: 300 QEFSFFDKVRRVLKSQEVYENFLRCIALFNQELVSGSELLQLVTPFLGKFPELFAQFKSF 359

Query: 409 LA 410
           L 
Sbjct: 360 LG 361


>gi|148235455|ref|NP_001091650.1| paired amphipathic helix protein Sin3a [Danio rerio]
 gi|146218422|gb|AAI39857.1| Zgc:162128 protein [Danio rerio]
          Length = 1276

 Score =  190 bits (483), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 167/287 (58%), Gaps = 14/287 (4%)

Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQ 558
           E+D ++C+R   SYR LPK+Y +P  + RT +  EVLND WVS  S SED +F   +K Q
Sbjct: 548 EIDYASCKRLGSSYRALPKSYQLPKCTGRTAICKEVLNDTWVSFPSWSEDSTFVSSKKTQ 607

Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFTA----L 614
           YEE ++RCED+RFELD++LE+   T + +E   +K++  + +     R+++        +
Sbjct: 608 YEEHMYRCEDERFELDVVLETNLATIRVLETTQKKLSRMSAEEQAKFRLDNTLGGFSEII 667

Query: 615 NLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKN 674
           + + I+R+YGD   D++D L+KN + ++P++L RLK K+EEW   +  FNK+W E   K 
Sbjct: 668 HRKAIQRIYGDKAPDIIDGLKKNPAASVPIVLKRLKLKEEEWREAQRGFNKIWREQNEKY 727

Query: 675 YHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIV--PHL 732
           Y KSLDH+   FKQ D+K L +K L  EI+ I ++++++      ++  N  +    PHL
Sbjct: 728 YLKSLDHQGINFKQNDTKVLRSKTLLNEIESIFDERQEQ------VSEDNSSTTASSPHL 781

Query: 733 EFEYSDPDIHEDLYQLIKYSCGEMCTTEQLD--KVMKIWTTFLEPML 777
              Y D  I ED   LI +      +  + D  K+ +I   F+  ML
Sbjct: 782 TLTYEDHQILEDAAALIIHHVKRQSSINKEDKYKIKQIVYHFIPDML 828



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 51/96 (53%), Positives = 66/96 (68%), Gaps = 5/96 (5%)

Query: 25  PSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTA 84
           PS  TQ     G    Q+L   DAL+YL  VK  F ++ + Y+DFL++MK+FK+Q IDT 
Sbjct: 108 PSASTQ-----GQQQFQRLKVEDALSYLDQVKLQFGNQPQVYNDFLDIMKEFKSQSIDTP 162

Query: 85  GVIARVKELFKGHRDLILGFNTFLPKGYEITLPLED 120
           GVI+RV +LFKGH DLI+GFNTFLP GY+I +   D
Sbjct: 163 GVISRVSQLFKGHPDLIMGFNTFLPPGYKIEVQTND 198



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 46/100 (46%), Positives = 60/100 (60%), Gaps = 18/100 (18%)

Query: 114 ITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI---- 169
           I  PL++ QP     VEF  AIN+VNKIK RFQG  ++YKSFL+IL+ Y+KE ++     
Sbjct: 295 IAPPLQNNQP-----VEFNHAINYVNKIKNRFQGQPNIYKSFLEILHKYQKEQRNAKEAG 349

Query: 170 ---------TEVYQEVEALFQDHPDLLEEFTHFLPDSSGA 200
                     EVY EV  LF++  DLL EF  FLPD++  
Sbjct: 350 GSYTPVLTEQEVYAEVAQLFKNQEDLLSEFGQFLPDANST 389



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 40/67 (59%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           ++ E+A+++++++K +F     VY  FLDI+  ++ ++     V   V  LF+ HPDL+ 
Sbjct: 121 LKVEDALSYLDQVKLQFGNQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIM 180

Query: 189 EFTHFLP 195
            F  FLP
Sbjct: 181 GFNTFLP 187


>gi|224005188|ref|XP_002296245.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|209586277|gb|ACI64962.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 1368

 Score =  190 bits (483), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 110/345 (31%), Positives = 182/345 (52%), Gaps = 56/345 (16%)

Query: 490  DKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSED- 548
            D + + P+ E+D S C RC+PSYR LP++Y  P  S+R+E   +VLND WVS+  GSE+ 
Sbjct: 664  DSWHSVPLSEIDFSRCRRCSPSYRALPRDYPNPPCSERSEEELKVLNDVWVSLPVGSEES 723

Query: 549  YSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEEL---LEKINNNTIKTDGPI 605
            Y+F+HMRKNQYEE+LFRCED RFE+DM ++    T +R+  +   L+ ++ N +   G I
Sbjct: 724  YTFRHMRKNQYEETLFRCEDMRFEIDMCIDGNASTMQRLSAIYDELQVLSENELLAKGSI 783

Query: 606  --RVED---------HFT-------ALNLRCIERLYGDHGLDVMDVLRKNASLALPVILT 647
              +  D          +T        ++   I R+YG+ G++++++  KN ++A+P++++
Sbjct: 784  SKKCPDGAGLGGKIFQYTLDGRVLGVIHKHTIRRIYGEDGVEMLELCFKNPAVAIPIVVS 843

Query: 648  RLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEIS 707
            RL+QK +EW   R   N+ W ++   NY+ SLDHRS  ++  D ++   + L AEIK+ +
Sbjct: 844  RLRQKDKEWRAARDALNRKWKDLAEYNYYYSLDHRSITWRTTDKRATSTRTLVAEIKDRA 903

Query: 708  ---------------EKKRKEDDVLLAIAAGN---------------RRSIVPHLEFEYS 737
                           EK ++E         G+               +    PH+ F Y+
Sbjct: 904  AHDGLEGEAALNAKKEKAKEEHGSFYETTMGSTLPKKMDLTYLPKPTKTLFTPHMSFIYN 963

Query: 738  -DPDIHEDLYQLIKYSCGEMCTTEQLDK--VMKIWTTFLEPMLGV 779
             D    +D Y++I +   E  +    DK    ++W  F+ P  G+
Sbjct: 964  GDSWAQQDAYRIISFGL-ERGSASPGDKERCYRLWRDFIAPWFGL 1007



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/77 (55%), Positives = 55/77 (71%)

Query: 40  AQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRD 99
            ++L   DAL YL  VK  F D+   Y++FLE+MK FKAQ +DT GVI RV+ LF G+ +
Sbjct: 218 GRELKVEDALLYLDQVKLEFGDRPRIYNEFLEIMKCFKAQEVDTVGVINRVRTLFCGYNN 277

Query: 100 LILGFNTFLPKGYEITL 116
           LILGFNTFLP GY+I +
Sbjct: 278 LILGFNTFLPDGYKIEM 294



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 39/75 (52%), Positives = 51/75 (68%)

Query: 123 PPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQD 182
           PP ++ VEF+ AI +V  IK RF      Y +FL+IL+ Y+KE + I EV ++V  LF D
Sbjct: 416 PPQQRAVEFDHAIMYVTNIKKRFANQPRTYHTFLEILHTYQKEQRGIKEVLEQVSTLFAD 475

Query: 183 HPDLLEEFTHFLPDS 197
           HPDLL EFT FLPD+
Sbjct: 476 HPDLLREFTFFLPDA 490



 Score = 42.7 bits (99), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 19/62 (30%), Positives = 33/62 (53%)

Query: 48  ALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTF 107
           A+ Y+  +K  F ++   Y  FLE++  ++ ++     V+ +V  LF  H DL+  F  F
Sbjct: 427 AIMYVTNIKKRFANQPRTYHTFLEILHTYQKEQRGIKEVLEQVSTLFADHPDLLREFTFF 486

Query: 108 LP 109
           LP
Sbjct: 487 LP 488



 Score = 42.4 bits (98), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 19/73 (26%), Positives = 38/73 (52%)

Query: 124 PPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDH 183
           P  + ++ E+A+ +++++K  F     +Y  FL+I+  ++ +      V   V  LF  +
Sbjct: 216 PSGRELKVEDALLYLDQVKLEFGDRPRIYNEFLEIMKCFKAQEVDTVGVINRVRTLFCGY 275

Query: 184 PDLLEEFTHFLPD 196
            +L+  F  FLPD
Sbjct: 276 NNLILGFNTFLPD 288


>gi|357604925|gb|EHJ64385.1| putative Paired AMPhipathic helix protein Sin3A [Danaus plexippus]
          Length = 1285

 Score =  190 bits (483), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 126/382 (32%), Positives = 191/382 (50%), Gaps = 33/382 (8%)

Query: 344 AMKSMFSQELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDL 401
           A K   + + SF ++ +  LR    Y  FLRCL L+T EII+ SEL  +    L R+P+L
Sbjct: 479 AGKMAAASDYSFFDRARKALRSQHVYDNFLRCLLLFTNEIISSSELLCVTAPFLCRHPEL 538

Query: 402 MDGFNGFLARCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDRE 461
                 F+              +    +N      S  + +R R        G + ++R 
Sbjct: 539 QKWLQDFVGPVSPPH---TPTNTHTGGYNNNFTSSSNLLYERTRL-------GSESKNRY 588

Query: 462 AREKDRLDKSVAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLI 521
                          + +GP +      ++       ++DLS C+R   SY  LP+    
Sbjct: 589 ---------------EPLGP-LGAQMRHERPQGDAAMDIDLSTCKRLGTSYCALPREAAA 632

Query: 522 PSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVN 581
              S RT L  EVLND WVS  + SED +F   RK QYEE ++RCED+RFELD+++E+  
Sbjct: 633 RKCSGRTPLCKEVLNDTWVSFPTWSEDSTFVTSRKTQYEEYIYRCEDERFELDVVIETNA 692

Query: 582 VTTKRVEELLEKINNNTIKTDGPIRVED----HFTALNLRCIERLYGDHGLDVMDVLRKN 637
            T + +E   +K++  + +     R++D    H   ++ R ++R+YGD  +D++  L+KN
Sbjct: 693 ATIRVLEGAQKKLSRMSPEDAAKYRLDDCLGGHSPTIHQRALKRIYGDKAVDIIAGLKKN 752

Query: 638 ASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAK 697
             +A+PV+L RLK K+EEW   +  FNK W E   K Y KSLDH+   FKQ D K+L +K
Sbjct: 753 PVVAVPVVLRRLKAKEEEWREAQKGFNKQWREQNEKYYLKSLDHQGITFKQNDLKALRSK 812

Query: 698 ALSAEIKEISEKKRKEDDVLLA 719
            L  E+ E +   RK    LL+
Sbjct: 813 CLFNEV-ESAFAVRKPGPHLLS 833



 Score =  100 bits (248), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 44/74 (59%), Positives = 56/74 (75%)

Query: 41  QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDL 100
           Q+L   DAL+YL  VK  F  + + Y+DFL++MK+FK+Q IDT GVI RV  LFKGH +L
Sbjct: 68  QRLKVEDALSYLDQVKYKFNTQPQVYNDFLDIMKEFKSQTIDTPGVITRVSNLFKGHPEL 127

Query: 101 ILGFNTFLPKGYEI 114
           I+GFNTFLP GY+I
Sbjct: 128 IVGFNTFLPPGYKI 141



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/91 (39%), Positives = 50/91 (54%), Gaps = 10/91 (10%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI----------TEVYQEV 176
           +PVEF  AI +VNKIK+RF      YK FL+IL+ Y++ ++ +           EVY +V
Sbjct: 268 QPVEFNHAIEYVNKIKSRFSRQPDKYKRFLEILHAYQRGHRDLKEPHAKQQTEQEVYAQV 327

Query: 177 EALFQDHPDLLEEFTHFLPDSSGAASIHYVP 207
             LF+   DLL EF  FLPD+        +P
Sbjct: 328 AKLFEKQDDLLAEFGQFLPDAKAVTKPTPIP 358



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 39/67 (58%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           ++ E+A+++++++K +F     VY  FLDI+  ++ +      V   V  LF+ HP+L+ 
Sbjct: 70  LKVEDALSYLDQVKYKFNTQPQVYNDFLDIMKEFKSQTIDTPGVITRVSNLFKGHPELIV 129

Query: 189 EFTHFLP 195
            F  FLP
Sbjct: 130 GFNTFLP 136



 Score = 47.4 bits (111), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 14/106 (13%)

Query: 41  QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFK----------AQRIDTAGVIARV 90
           Q +  N A+ Y+  +K  F  + +KY  FLE++  ++          A++     V A+V
Sbjct: 268 QPVEFNHAIEYVNKIKSRFSRQPDKYKRFLEILHAYQRGHRDLKEPHAKQQTEQEVYAQV 327

Query: 91  KELFKGHRDLILGFNTFLPKGYEIT----LPLEDEQPPPKKPVEFE 132
            +LF+   DL+  F  FLP    +T    +P     PPP+  +E E
Sbjct: 328 AKLFEKQDDLLAEFGQFLPDAKAVTKPTPIPPHSRSPPPQVRMEAE 373


>gi|66357980|ref|XP_626168.1| Sin3 like paired amphipathic helix containing protein
           [Cryptosporidium parvum Iowa II]
 gi|46227260|gb|EAK88210.1| Sin3 like paired amphipathic helix containing protein
           [Cryptosporidium parvum Iowa II]
          Length = 1434

 Score =  190 bits (483), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 97/226 (42%), Positives = 142/226 (62%), Gaps = 2/226 (0%)

Query: 489 KDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSED 548
           K  Y      +LD +N  R   SY  LPK+Y I S + R +   E LND WVS+  GSED
Sbjct: 355 KYSYFCCNFAQLDYTNSARNGSSYLHLPKDYPIASCTGRIKSDQENLNDKWVSIPQGSED 414

Query: 549 YSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIR-V 607
           +SFKHMRKN YEE+LF+CED+RFELDM++E+   T   +E + E+I+  + +     + V
Sbjct: 415 FSFKHMRKNVYEENLFKCEDERFELDMVIENNRSTINALEPIAEEISKLSPEDKKNFKLV 474

Query: 608 EDHFTALNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNK-V 666
           +  F+ ++L+ I R+YGD+G +++++L++     +PVIL RL+QK EEW   R   N+ V
Sbjct: 475 KPPFSIIHLKAISRIYGDNGPEILELLKRTPYSCIPVILNRLRQKDEEWTHARHLMNQGV 534

Query: 667 WAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRK 712
           W +I +KNY KS DHRSFYF+Q D K+   K    +I +   + R+
Sbjct: 535 WRDIQTKNYFKSFDHRSFYFRQVDKKNTNVKGFLCDINKAYMQNRR 580



 Score = 90.5 bits (223), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 55/149 (36%), Positives = 77/149 (51%), Gaps = 13/149 (8%)

Query: 51  YLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPK 110
           YL  ++    +  E Y +FL +M+DFK   I+   VI +V ELFK    LI  FN FLP+
Sbjct: 17  YLSRLRSKCGEDTELYQEFLRIMRDFKHGSINARMVIDQVAELFKKDTSLIAEFNNFLPE 76

Query: 111 GYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSIT 170
              + +P  D           E A  FV K+K        +Y  FL +L+ Y+   KS+ 
Sbjct: 77  ELRLQIPQND----------CEYAAAFVKKVKDIAPA---IYNDFLMLLSKYKDGEKSVN 123

Query: 171 EVYQEVEALFQDHPDLLEEFTHFLPDSSG 199
           EV +   +LF  +PDLLEEF  F+P+ SG
Sbjct: 124 EVCELSSSLFASYPDLLEEFVLFIPELSG 152


>gi|410921500|ref|XP_003974221.1| PREDICTED: paired amphipathic helix protein Sin3b-like [Takifugu
           rubripes]
          Length = 1218

 Score =  190 bits (482), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 115/306 (37%), Positives = 172/306 (56%), Gaps = 14/306 (4%)

Query: 498 QELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKN 557
           +E+D ++C+R   SYR LPK Y  P  S RT L  EVLND WVS  S SED +F   +K 
Sbjct: 446 REVDYASCKRLGSSYRALPKTYQQPKCSGRTALCKEVLNDTWVSFPSWSEDSTFVSSKKT 505

Query: 558 QYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TA 613
            YEE L RCED+RFELD++LE+   T + +E + +K++  + +     R++D        
Sbjct: 506 PYEEQLHRCEDERFELDVVLETNLATIRVLESVQKKLSRLSPEDQDRFRLDDCLGGTSEV 565

Query: 614 LNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSK 673
           +  R + R+YGD   ++++ L+++ + A+PV+L RLK K+EEW   +  FNK+W E Y K
Sbjct: 566 IQRRAVYRIYGDKAPEIIEGLKRSPATAVPVVLKRLKAKEEEWREAQQGFNKLWREQYEK 625

Query: 674 NYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAI------AAGNRRS 727
            Y KSLDH+   FKQ D K+L +K+L  EI+ I ++++++      +       +G+  S
Sbjct: 626 AYLKSLDHQGVNFKQNDVKALRSKSLLNEIESIYDERQEQSTEEGGVGQQGRNGSGSTSS 685

Query: 728 IVPHLEFEYSDPDIHEDLYQLIKYSCGEMCTTEQLDK--VMKIWTTFLEPMLGVPSRPQG 785
             PH+ F Y D  I ED   LI Y      T  + DK  + +I   F+  +    SR   
Sbjct: 686 SEPHMLFTYEDKQILEDAASLIIYHVKRQPTIHKDDKDHIKRIIQHFVPDLFF--SRRGE 743

Query: 786 AEDTED 791
             DTED
Sbjct: 744 LSDTED 749



 Score = 93.6 bits (231), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 43/76 (56%), Positives = 53/76 (69%)

Query: 42  KLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLI 101
           KL   DAL+YL  VK  F +    Y+ FL++MK+FK+Q IDT GVI RV +LF GH DL+
Sbjct: 35  KLKVEDALSYLDQVKIRFANDPGIYNKFLDIMKEFKSQSIDTPGVINRVSQLFHGHPDLV 94

Query: 102 LGFNTFLPKGYEITLP 117
           LGFN FLP GY I +P
Sbjct: 95  LGFNAFLPPGYRIEIP 110



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 53/91 (58%), Gaps = 16/91 (17%)

Query: 123 PPPKK--PVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSIT---------- 170
           PP  +  PVEF+ AIN+VNKIK RF     +Y+SFL+IL+ Y+KE   +           
Sbjct: 203 PPASETSPVEFDSAINYVNKIKNRFLDHPEIYRSFLEILHTYQKEQLEVKESRGGRGSSG 262

Query: 171 ----EVYQEVEALFQDHPDLLEEFTHFLPDS 197
               EV+ +V +LF+   DLL EF  FLPD+
Sbjct: 263 MTEDEVFSKVASLFKGQEDLLAEFGQFLPDA 293



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 40/67 (59%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           ++ E+A+++++++K RF  D  +Y  FLDI+  ++ ++     V   V  LF  HPDL+ 
Sbjct: 36  LKVEDALSYLDQVKIRFANDPGIYNKFLDIMKEFKSQSIDTPGVINRVSQLFHGHPDLVL 95

Query: 189 EFTHFLP 195
            F  FLP
Sbjct: 96  GFNAFLP 102



 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 24/62 (38%), Positives = 40/62 (64%), Gaps = 2/62 (3%)

Query: 351 QELSFCEKVKD--KLRDDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGF 408
           +E SF +KV+   K ++ Y+ FLRC+ L+ +E+++ +EL  LV   LG++P+L   F  F
Sbjct: 363 REFSFFDKVRRLFKSQEVYENFLRCIALFNQEVVSAAELLQLVTPFLGKFPELYTQFKSF 422

Query: 409 LA 410
           L 
Sbjct: 423 LG 424



 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 66/309 (21%), Positives = 110/309 (35%), Gaps = 86/309 (27%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRID---------TAG-----VIARVK 91
           + A+ Y+  +K+ F D  E Y  FLE++  ++ ++++         ++G     V ++V 
Sbjct: 214 DSAINYVNKIKNRFLDHPEIYRSFLEILHTYQKEQLEVKESRGGRGSSGMTEDEVFSKVA 273

Query: 92  ELFKGHRDLILGFNTFLP-------KGYEIT-------------------------LPLE 119
            LFKG  DL+  F  FLP        G  +T                         + L+
Sbjct: 274 SLFKGQEDLLAEFGQFLPDAKRSLFTGSSLTSGKESLKRPDDEDAITKQNKKRPRPILLQ 333

Query: 120 DEQPPPKKPVEFE----------------EAINFVNKIKTRFQGDDHVYKSFLDILNMYR 163
              P  KK +++                    +F +K++  F+  + VY++FL  + ++ 
Sbjct: 334 HMSPLLKKKMKYSCTKDQSFASVGKHGVLREFSFFDKVRRLFKSQE-VYENFLRCIALFN 392

Query: 164 KENKSITEVYQEVEALFQDHPDLLEEFTHFLPD----------------SSGAASIHYVP 207
           +E  S  E+ Q V       P+L  +F  FL D                  G   + Y  
Sbjct: 393 QEVVSAAELLQLVTPFLGKFPELYTQFKSFLGDKELSHAVSGLSDRYMEGGGGREVDYAS 452

Query: 208 SGRNSILRDRSSAMPTARQVHVDKKERAMASHADRDLSVDRPDPDHDRVLLKSDK----D 263
             R   L     A+P   Q        A+      D  V  P    D   + S K    +
Sbjct: 453 CKR---LGSSYRALPKTYQQPKCSGRTALCKEVLNDTWVSFPSWSEDSTFVSSKKTPYEE 509

Query: 264 QRRRGEKER 272
           Q  R E ER
Sbjct: 510 QLHRCEDER 518


>gi|301753831|ref|XP_002912826.1| PREDICTED: LOW QUALITY PROTEIN: paired amphipathic helix protein
           Sin3b-like [Ailuropoda melanoleuca]
          Length = 1052

 Score =  190 bits (482), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 123/353 (34%), Positives = 186/353 (52%), Gaps = 31/353 (8%)

Query: 498 QELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKN 557
           +E+D ++C+R   SYR LPK Y  P  S RT +  EVLND WVS  S SED +F   +K 
Sbjct: 351 REIDYASCKRIGSSYRALPKTYQQPKCSGRTAICKEVLNDTWVSFPSWSEDSTFVSSKKT 410

Query: 558 QYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TA 613
            YEE L RCED+RFELD++LE+   T + +E + +K++    +     R++D        
Sbjct: 411 PYEEQLHRCEDERFELDVVLETNLATIRVLESVQKKLSRMAPEDQEKFRLDDCLGGTSEV 470

Query: 614 LNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSK 673
           +  R I R+YGD   ++++ L+KN   A+PV+L RLK K+EEW   +  FNK+W E Y K
Sbjct: 471 IQRRAIHRIYGDKAPEIIESLKKNPVTAVPVVLKRLKAKEEEWREAQQGFNKIWREQYEK 530

Query: 674 NYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLE 733
            Y KSLDH++  FKQ D+K+L +K+L  EI+ + ++ +++          +  S  PHL 
Sbjct: 531 AYLKSLDHQAVNFKQNDTKALRSKSLLNEIESVYDEHQEQHS-----EGRSAPSSEPHLI 585

Query: 734 FEYSDPDIHEDLYQLIKYSCGEMCTTEQLDK--VMKIWTTFLEPMLGVPSRPQGA-EDTE 790
           F Y D  I ED   LI Y        ++ D+  + ++   F+  +        GA ED+ 
Sbjct: 586 FVYEDRQILEDAAALISYYVKRQPAIQKEDQGTIHQLVHQFVPSLFFSQQLELGASEDSA 645

Query: 791 DVVKAKSHTVKSRAASVGDSDGSPDGDAAAMTSKHSNPSRNGDESIPPEQSSS 843
           D                 +  GSP G +A    +   P+  G +S PPE+  +
Sbjct: 646 D-----------------EGRGSPQGQSAEPGDR-KKPA-PGPQSSPPEEKGA 679



 Score =  135 bits (339), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 85/214 (39%), Positives = 107/214 (50%), Gaps = 45/214 (21%)

Query: 45  TNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGF 104
             DAL YL  VK  F      Y+ FLE+MK+FK+Q IDT GVI RV +LF  H DLI+GF
Sbjct: 5   VEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRVSQLFHEHPDLIVGF 64

Query: 105 NTFLPKGYEITLP----LEDEQP--------------------------PPKKP-----V 129
           N FLP GY I +P    L  + P                           P+ P     V
Sbjct: 65  NAFLPLGYRIDIPKNGKLNIQSPLSSQENSHSHSDCAENFKPQMLYKEDKPQVPLESDSV 124

Query: 130 EFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSIT----------EVYQEVEAL 179
           EF  AI++VNKIKTRF     +Y+SFL+IL+ Y+KE  S            EV+ EV  L
Sbjct: 125 EFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLSTKGRPFRGMSEEEVFTEVANL 184

Query: 180 FQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSI 213
           F+   DLL EF  FLP++  +      P   NS+
Sbjct: 185 FRGQEDLLSEFGQFLPEAKRSLFTGNGPCEMNSV 218



 Score = 58.2 bits (139), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 5/79 (6%)

Query: 351 QELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGF 408
           QE SF +KV+  L+    Y+ FLRC+ L+ +E+++ SEL  LV   LG++P+L   F  F
Sbjct: 270 QEFSFFDKVRRVLKSQEVYENFLRCIALFNQELVSGSELLQLVSPFLGKFPELFAQFKSF 329

Query: 409 LARCEKSEELLADVMSKKS 427
           L   E S    A  MS +S
Sbjct: 330 LGVKELS---FAPPMSDRS 345


>gi|67609201|ref|XP_666929.1| transcriptional regulatory-like protein [Cryptosporidium hominis
           TU502]
 gi|54658007|gb|EAL36701.1| transcriptional regulatory-like protein [Cryptosporidium hominis]
          Length = 1157

 Score =  190 bits (482), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 97/226 (42%), Positives = 142/226 (62%), Gaps = 2/226 (0%)

Query: 489 KDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSED 548
           K  Y      +LD +N  R   SY  LPK+Y I S + R +   E LND WVS+  GSED
Sbjct: 78  KYSYFCCNFAQLDYTNSARNGSSYLHLPKDYPIASCTGRIKSDKENLNDKWVSIPQGSED 137

Query: 549 YSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIR-V 607
           +SFKHMRKN YEE+LF+CED+RFELDM++E+   T   +E + E+I+  + +     + V
Sbjct: 138 FSFKHMRKNVYEENLFKCEDERFELDMVIENNRSTINALEPIAEEISKLSPEDKKNFKLV 197

Query: 608 EDHFTALNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNK-V 666
           +  F+ ++L+ I R+YGD+G +++++L++     +PVIL RL+QK EEW   R   N+ V
Sbjct: 198 KPPFSIIHLKAISRIYGDNGPEILELLKRTPYSCIPVILNRLRQKDEEWTHARHLMNQGV 257

Query: 667 WAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRK 712
           W +I +KNY KS DHRSFYF+Q D K+   K    +I +   + R+
Sbjct: 258 WRDIQTKNYFKSFDHRSFYFRQVDKKNTNVKGFLCDINKAYMQNRR 303


>gi|449491832|ref|XP_002192768.2| PREDICTED: paired amphipathic helix protein Sin3b [Taeniopygia
           guttata]
          Length = 1161

 Score =  190 bits (482), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 109/272 (40%), Positives = 159/272 (58%), Gaps = 11/272 (4%)

Query: 498 QELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKN 557
           +E+D ++C+R   SYR LPK Y  P  S RT +  EVLND WVS  S SED +F   +K 
Sbjct: 426 REIDYASCKRIGSSYRALPKTYQQPKCSGRTAICKEVLNDTWVSFPSWSEDSTFVSSKKT 485

Query: 558 QYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TA 613
            YEE L RCED+RFELD++LE+   T + +E + +K++  T +     R++D        
Sbjct: 486 PYEEQLHRCEDERFELDVVLETNLATIRVLESVQKKLSRLTQEDQEKFRLDDCLGGTSEV 545

Query: 614 LNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSK 673
           +  R I R+YGD   ++++ L+KN   A+PV+L RLK K+EEW   +  FNK+W E Y K
Sbjct: 546 IQRRAIYRIYGDKAPEIIESLKKNPVTAVPVVLKRLKAKEEEWREAQQGFNKIWREQYEK 605

Query: 674 NYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSI-VPHL 732
            Y KSLDH++  FKQ D+K+L +K+L  EI+ + ++ +++       + G   S   PHL
Sbjct: 606 AYLKSLDHQAVNFKQNDTKALRSKSLLNEIESVYDEHQEQH------SEGRSSSTNEPHL 659

Query: 733 EFEYSDPDIHEDLYQLIKYSCGEMCTTEQLDK 764
            F Y D  I ED   LI Y      T ++ D+
Sbjct: 660 IFIYEDKQILEDAASLISYYVKRQPTIQKEDQ 691



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 88/249 (35%), Positives = 113/249 (45%), Gaps = 69/249 (27%)

Query: 34  GGGGGGAQKLTT---NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARV 90
           GG    + ++ T    DAL+YL  VK  F      Y+ FLE+MK+FK+Q IDT GVI RV
Sbjct: 45  GGSRACSHRVLTPQVEDALSYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRV 104

Query: 91  KELFKGHRDLILGFNTFLPKGYEITL----------PLEDEQPPPKKP------------ 128
            +LF  H DLI+GFN FLP GY I +          PL  + PP   P            
Sbjct: 105 SQLFHEHPDLIVGFNAFLPLGYRIEIPKNGKLSIQSPLNSQVPPEPVPSALPGSGLVLHY 164

Query: 129 ----------------------------------VEFEEAINFVNKIKTRFQGDDHVYKS 154
                                             VEF  AI++VNKIKTRF     +Y+S
Sbjct: 165 SQGNSHNHSDCSEEFRQQLPYKEDKSQIPLESDSVEFNNAISYVNKIKTRFLDHPEIYRS 224

Query: 155 FLDILNMYRKEN----------KSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIH 204
           FL+IL+ Y+KE            S  EV+ EV  LF+   DLL EF  FLP++  +    
Sbjct: 225 FLEILHTYQKEQLNTKGRPFRGMSEEEVFTEVANLFRGQEDLLSEFGQFLPEAKRSLFTG 284

Query: 205 YVPSGRNSI 213
             P   NS+
Sbjct: 285 NGPCEVNSV 293



 Score = 57.0 bits (136), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 26/62 (41%), Positives = 39/62 (62%), Gaps = 2/62 (3%)

Query: 351 QELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGF 408
           QE SF +KV+  L+    Y+ FLRC+ L+ +E+++ SEL  LV   LG++P+L   F  F
Sbjct: 345 QEFSFFDKVRRVLKSQEVYENFLRCIALFNQELVSGSELLQLVTPFLGKFPELFAQFKSF 404

Query: 409 LA 410
           L 
Sbjct: 405 LG 406


>gi|326934584|ref|XP_003213368.1| PREDICTED: paired amphipathic helix protein Sin3b-like [Meleagris
           gallopavo]
          Length = 1144

 Score =  189 bits (481), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 109/272 (40%), Positives = 159/272 (58%), Gaps = 11/272 (4%)

Query: 498 QELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKN 557
           +E+D ++C+R   SYR LPK Y  P  S RT +  EVLND WVS  S SED +F   +K 
Sbjct: 409 REIDYASCKRIGSSYRALPKTYQQPKCSGRTAICKEVLNDTWVSFPSWSEDSTFVSSKKT 468

Query: 558 QYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TA 613
            YEE L RCED+RFELD++LE+   T + +E + +K++  T +     R++D        
Sbjct: 469 PYEEQLHRCEDERFELDVVLETNLATIRVLESVQKKLSRLTQEDQEKFRLDDCLGGTSEV 528

Query: 614 LNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSK 673
           +  R I R+YGD   ++++ L+KN   A+PV+L RLK K+EEW   +  FNK+W E Y K
Sbjct: 529 IQRRAIYRIYGDKAPEIIESLKKNPVTAVPVVLKRLKAKEEEWREAQQGFNKIWREQYEK 588

Query: 674 NYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSI-VPHL 732
            Y KSLDH++  FKQ D+K+L +K+L  EI+ + ++ +++       + G   S   PHL
Sbjct: 589 AYLKSLDHQAVNFKQNDTKALRSKSLLNEIESVYDEHQEQH------SEGRSSSTNEPHL 642

Query: 733 EFEYSDPDIHEDLYQLIKYSCGEMCTTEQLDK 764
            F Y D  I ED   LI Y      T ++ D+
Sbjct: 643 IFIYEDKQILEDAASLISYYVKRQPTIQKEDQ 674



 Score =  134 bits (337), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 87/223 (39%), Positives = 111/223 (49%), Gaps = 45/223 (20%)

Query: 36  GGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFK 95
           G   A +    DAL+YL  VK  F      Y+ FLE+MK+FK+Q IDT GVI RV +LF 
Sbjct: 54  GHFAASRPQVEDALSYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRVSQLFH 113

Query: 96  GHRDLILGFNTFLPKGYEITLP----LEDEQP---------------------PPKK--- 127
            H DLI+GFN FLP GY I +P    L  + P                     P K+   
Sbjct: 114 EHPDLIVGFNAFLPLGYRIEIPKNGKLSIQSPLTSQENSHNHSDCTEEFRHQLPYKEDKS 173

Query: 128 -------PVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKEN----------KSIT 170
                   VEF  AI++VNKIKTRF     +Y+SFL+IL+ Y+KE            S  
Sbjct: 174 QIPLESDSVEFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLNTKGRPFRGMSEE 233

Query: 171 EVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSI 213
           EV+ EV  LF+   DLL EF  FLP++  +      P   NS+
Sbjct: 234 EVFTEVANLFRGQEDLLSEFGQFLPEAKRSLFTGNGPCEVNSV 276



 Score = 57.0 bits (136), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 26/62 (41%), Positives = 39/62 (62%), Gaps = 2/62 (3%)

Query: 351 QELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGF 408
           QE SF +KV+  L+    Y+ FLRC+ L+ +E+++ SEL  LV   LG++P+L   F  F
Sbjct: 328 QEFSFFDKVRRVLKSQEVYENFLRCIALFNQELVSGSELLQLVTPFLGKFPELFAQFKSF 387

Query: 409 LA 410
           L 
Sbjct: 388 LG 389


>gi|58257660|dbj|BAA31675.2| KIAA0700 protein [Homo sapiens]
          Length = 1137

 Score =  189 bits (481), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 105/258 (40%), Positives = 152/258 (58%), Gaps = 9/258 (3%)

Query: 498 QELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKN 557
           +E+D ++C+R   SYR LPK Y  P  S RT +  EVLND WVS  S SED +F   +K 
Sbjct: 394 REIDYASCKRIGSSYRALPKTYQQPKCSGRTAICKEVLNDTWVSFPSWSEDSTFVSSKKT 453

Query: 558 QYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TA 613
            YEE L RCED+RFELD++LE+   T + +E + +K++    +     R++D        
Sbjct: 454 PYEEQLHRCEDERFELDVVLETNLATIRVLESVQKKLSRMAPEDQEKFRLDDSLGGTSEV 513

Query: 614 LNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSK 673
           +  R I R+YGD   ++++ L+KN   A+PV+L RLK K+EEW   +  FNK+W E Y K
Sbjct: 514 IQRRAIYRIYGDKAPEIIESLKKNPVTAVPVVLKRLKAKEEEWREAQQGFNKIWREQYEK 573

Query: 674 NYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLE 733
            Y KSLDH++  FKQ D+K+L +K+L  EI+ + ++ +++          +  S  PHL 
Sbjct: 574 AYLKSLDHQAVNFKQNDTKALRSKSLLNEIESVYDEHQEQHS-----EGRSAPSSEPHLI 628

Query: 734 FEYSDPDIHEDLYQLIKY 751
           F Y D  I ED   LI Y
Sbjct: 629 FVYEDRQILEDAAALISY 646



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 92/237 (38%), Positives = 119/237 (50%), Gaps = 47/237 (19%)

Query: 33  GGGGGGGAQKLTTN--DALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARV 90
           G  G  G +KL  +  DAL YL  VK  F      Y+ FLE+MK+FK+Q IDT GVI RV
Sbjct: 34  GRSGSAGHEKLPVHVEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRV 93

Query: 91  KELFKGHRDLILGFNTFLPKGYEITLP-----------------------LED--EQPP- 124
            +LF  H DLI+GFN FLP GY I +P                        ED  +Q P 
Sbjct: 94  SQLFHEHPDLIVGFNAFLPLGYRIDIPKNGKLNIQSPLTSQENSHNHGDGAEDFKQQVPY 153

Query: 125 ----PKKP-----VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKEN--------- 166
               P+ P     VEF  AI++VNKIKTRF     +Y+SFL+IL+ Y+KE          
Sbjct: 154 KEDKPQVPLESDSVEFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLNTRGRPFR 213

Query: 167 -KSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMP 222
             S  EV+ EV  LF+   DLL EF  FLP++  +      P   +S+ ++     P
Sbjct: 214 GMSEEEVFTEVANLFRGQEDLLSEFGQFLPEAKRSLFTGNGPCEMHSVQKNEHDKTP 270



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 5/79 (6%)

Query: 351 QELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGF 408
           QE SF +KV+  L+    Y+ FLRC+ L+ +E+++ SEL  LV   LG++P+L   F  F
Sbjct: 313 QEFSFFDKVRRVLKSQEVYENFLRCIALFNQELVSGSELLQLVSPFLGKFPELFAQFKSF 372

Query: 409 LARCEKSEELLADVMSKKS 427
           L   E S    A  MS +S
Sbjct: 373 LGVKELS---FAPPMSDRS 388


>gi|2829872|gb|AAC00580.1| Hypothetical protein [Arabidopsis thaliana]
          Length = 173

 Score =  189 bits (481), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 97/164 (59%), Positives = 118/164 (71%), Gaps = 3/164 (1%)

Query: 36  GGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFK 95
           G GGA K TTNDAL YL+AVK  FQ +REKYD+FL++M D+K QRID +GVI R+KEL K
Sbjct: 3   GEGGAHKPTTNDALKYLRAVKAKFQGQREKYDEFLQIMIDYKTQRIDISGVIIRMKELLK 62

Query: 96  GHRDLILGFNTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSF 155
             + L+LGFN FLP GY IT     EQP  KKPVE  EAI+F+NKIKTRFQGDD VYKS 
Sbjct: 63  EQQGLLLGFNAFLPNGYMIT---HHEQPSQKKPVELGEAISFINKIKTRFQGDDRVYKSV 119

Query: 156 LDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSG 199
           LDILNMYRK+ K IT VY+E +       + + +F+ +  DS+ 
Sbjct: 120 LDILNMYRKDRKPITAVYREDKGYRNYSTNKVTKFSVYRKDSNA 163


>gi|355703284|gb|EHH29775.1| Transcriptional corepressor Sin3b [Macaca mulatta]
          Length = 1164

 Score =  189 bits (481), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 105/258 (40%), Positives = 152/258 (58%), Gaps = 9/258 (3%)

Query: 498 QELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKN 557
           +E+D ++C+R   SYR LPK Y  P  S RT +  EVLND WVS  S SED +F   +K 
Sbjct: 359 REIDYASCKRIGSSYRALPKTYQQPKCSGRTAICKEVLNDTWVSFPSWSEDSTFVSSKKT 418

Query: 558 QYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TA 613
            YEE L RCED+RFELD++LE+   T + +E + +K++    +     R++D        
Sbjct: 419 PYEEQLHRCEDERFELDVVLETNLATIRVLESVQKKLSRMAPEDQEKFRLDDSLGGTSEV 478

Query: 614 LNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSK 673
           +  R I R+YGD   ++++ L+KN   A+PV+L RLK K+EEW   +  FNK+W E Y K
Sbjct: 479 IQRRAIYRIYGDKAPEIIESLKKNPVTAVPVVLKRLKAKEEEWREAQQGFNKIWREQYEK 538

Query: 674 NYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLE 733
            Y KSLDH++  FKQ D+K+L +K+L  EI+ + ++ +++          +  S  PHL 
Sbjct: 539 AYLKSLDHQAVNFKQNDTKALRSKSLLNEIESVYDEHQEQHS-----EGRSAPSSEPHLI 593

Query: 734 FEYSDPDIHEDLYQLIKY 751
           F Y D  I ED   LI Y
Sbjct: 594 FVYEDRQILEDAAALISY 611



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 87/227 (38%), Positives = 115/227 (50%), Gaps = 45/227 (19%)

Query: 41  QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDL 100
           +++   DAL YL  VK  F      Y+ FLE+MK+FK+Q IDT GVI RV +LF  H DL
Sbjct: 9   REVKVEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRVSQLFHEHPDL 68

Query: 101 ILGFNTFLPKGYEITLP-----------------------LED--EQPP-----PKKP-- 128
           I+GFN FLP GY I +P                        ED  +Q P     P+ P  
Sbjct: 69  IVGFNAFLPLGYRIDIPKNGKLNIQSPLTSQENSHNHGDGAEDFKQQVPYKEDKPQVPLE 128

Query: 129 ---VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKEN----------KSITEVYQE 175
              VEF  AI++VNKIKTRF     +Y+SFL+IL+ Y+KE            S  EV+ E
Sbjct: 129 SDSVEFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLNTRGRPFRGMSEEEVFTE 188

Query: 176 VEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMP 222
           V  LF+   DLL EF  FLP++  +      P   +S+ ++     P
Sbjct: 189 VANLFRGQEDLLSEFGQFLPEAKRSLFTGNGPCEMHSVQKNEHDKTP 235



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 5/79 (6%)

Query: 351 QELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGF 408
           QE SF +KV+  L+    Y+ FLRC+ L+ +E+++ SEL  LV   LG++P+L   F  F
Sbjct: 278 QEFSFFDKVRRVLKSQEVYENFLRCIALFNQELVSGSELLQLVSPFLGKFPELFAQFKSF 337

Query: 409 LARCEKSEELLADVMSKKS 427
           L   E S    A  MS +S
Sbjct: 338 LGVKELS---FAPPMSDRS 353


>gi|119604970|gb|EAW84564.1| SIN3 homolog B, transcription regulator (yeast), isoform CRA_a
           [Homo sapiens]
 gi|208965516|dbj|BAG72772.1| SIN3 homolog B, transcription regulator [synthetic construct]
          Length = 1130

 Score =  189 bits (481), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 105/258 (40%), Positives = 152/258 (58%), Gaps = 9/258 (3%)

Query: 498 QELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKN 557
           +E+D ++C+R   SYR LPK Y  P  S RT +  EVLND WVS  S SED +F   +K 
Sbjct: 387 REIDYASCKRIGSSYRALPKTYQQPKCSGRTAICKEVLNDTWVSFPSWSEDSTFVSSKKT 446

Query: 558 QYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TA 613
            YEE L RCED+RFELD++LE+   T + +E + +K++    +     R++D        
Sbjct: 447 PYEEQLHRCEDERFELDVVLETNLATIRVLESVQKKLSRMAPEDQEKFRLDDSLGGTSEV 506

Query: 614 LNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSK 673
           +  R I R+YGD   ++++ L+KN   A+PV+L RLK K+EEW   +  FNK+W E Y K
Sbjct: 507 IQRRAIYRIYGDKAPEIIESLKKNPVTAVPVVLKRLKAKEEEWREAQQGFNKIWREQYEK 566

Query: 674 NYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLE 733
            Y KSLDH++  FKQ D+K+L +K+L  EI+ + ++ +++          +  S  PHL 
Sbjct: 567 AYLKSLDHQAVNFKQNDTKALRSKSLLNEIESVYDEHQEQHS-----EGRSAPSSEPHLI 621

Query: 734 FEYSDPDIHEDLYQLIKY 751
           F Y D  I ED   LI Y
Sbjct: 622 FVYEDRQILEDAAALISY 639



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 92/237 (38%), Positives = 119/237 (50%), Gaps = 47/237 (19%)

Query: 33  GGGGGGGAQKLTTN--DALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARV 90
           G  G  G +KL  +  DAL YL  VK  F      Y+ FLE+MK+FK+Q IDT GVI RV
Sbjct: 27  GRSGSAGHEKLPVHVEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRV 86

Query: 91  KELFKGHRDLILGFNTFLPKGYEITLP-----------------------LED--EQPP- 124
            +LF  H DLI+GFN FLP GY I +P                        ED  +Q P 
Sbjct: 87  SQLFHEHPDLIVGFNAFLPLGYRIDIPKNGKLNIQSPLTSQENSHNHGDGAEDFKQQVPY 146

Query: 125 ----PKKP-----VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKEN--------- 166
               P+ P     VEF  AI++VNKIKTRF     +Y+SFL+IL+ Y+KE          
Sbjct: 147 KEDKPQVPLESDSVEFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLNTRGRPFR 206

Query: 167 -KSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMP 222
             S  EV+ EV  LF+   DLL EF  FLP++  +      P   +S+ ++     P
Sbjct: 207 GMSEEEVFTEVANLFRGQEDLLSEFGQFLPEAKRSLFTGNGPCEMHSVQKNEHDKTP 263



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 5/79 (6%)

Query: 351 QELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGF 408
           QE SF +KV+  L+    Y+ FLRC+ L+ +E+++ SEL  LV   LG++P+L   F  F
Sbjct: 306 QEFSFFDKVRRVLKSQEVYENFLRCIALFNQELVSGSELLQLVSPFLGKFPELFAQFKSF 365

Query: 409 LARCEKSEELLADVMSKKS 427
           L   E S    A  MS +S
Sbjct: 366 LGVKELS---FAPPMSDRS 381


>gi|332253622|ref|XP_003275935.1| PREDICTED: paired amphipathic helix protein Sin3b [Nomascus
           leucogenys]
          Length = 1163

 Score =  189 bits (480), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 137/408 (33%), Positives = 202/408 (49%), Gaps = 49/408 (12%)

Query: 351 QELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGF 408
           QE SF +KV+  L+    Y+ FLRC+ L+ +E+++ SEL  LV   LG++P+L   F  F
Sbjct: 303 QEFSFFDKVRRVLKSQEVYENFLRCIALFNQELVSGSELLQLVSPFLGKFPELFAQFKSF 362

Query: 409 LARCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRL 468
           L   E S    A  MS +S                         DG+  R+ +     R+
Sbjct: 363 LGVKELS---FAPPMSDRS------------------------GDGI-SREIDYASCKRI 394

Query: 469 DKSVAFVNKDV-GPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQR 527
             S   + K    PK S  ++  K L            + C   ++       IP  S  
Sbjct: 395 GSSYRALPKTYQQPKCSGRTAICKELDHWTLLQGSWTDDYCMSKFK---NTCWIPGYS-- 449

Query: 528 TELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRV 587
               A VLND WVS  S SED +F   +K  YEE L RCED+RFELD++LE+   T + +
Sbjct: 450 ----AGVLNDTWVSFPSWSEDSTFVSSKKTPYEEQLHRCEDERFELDVVLETNLATIRVL 505

Query: 588 EELLEKINNNTIKTDGPIRVEDHF----TALNLRCIERLYGDHGLDVMDVLRKNASLALP 643
           E + +K++    +     R++D        +  R I R+YGD   ++++ L+KN   A+P
Sbjct: 506 ESVQKKLSRMAPEDQEKFRLDDSLGGTSEVIQRRAIYRIYGDKAPEIIESLKKNPVTAVP 565

Query: 644 VILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEI 703
           V+L RLK K+EEW   +  FNK+W E Y K Y KSLDH++  FKQ D+K+L +K+L  EI
Sbjct: 566 VVLKRLKAKEEEWREAQQGFNKIWREQYEKAYLKSLDHQAVNFKQNDTKALRSKSLLNEI 625

Query: 704 KEISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLIKY 751
           + + ++ +++          +  S  PHL F Y D  I ED   LI Y
Sbjct: 626 ESVYDEHQEQHS-----EGRSAPSSEPHLIFVYEDRQILEDAAALISY 668



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 92/237 (38%), Positives = 119/237 (50%), Gaps = 47/237 (19%)

Query: 33  GGGGGGGAQKLTTN--DALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARV 90
           G  G  G +KL  +  DAL YL  VK  F      Y+ FLE+MK+FK+Q IDT GVI RV
Sbjct: 24  GRSGSAGHEKLPVHVEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRV 83

Query: 91  KELFKGHRDLILGFNTFLPKGYEITLP-----------------------LED--EQPP- 124
            +LF  H DLI+GFN FLP GY I +P                        ED  +Q P 
Sbjct: 84  SQLFHEHPDLIVGFNAFLPLGYRIDIPKNGKLNIQSPLTSQENSHNHGDGAEDFKQQVPY 143

Query: 125 ----PKKP-----VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKEN--------- 166
               P+ P     VEF  AI++VNKIKTRF     +Y+SFL+IL+ Y+KE          
Sbjct: 144 KEDKPQVPLESDSVEFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLNTRGRPFR 203

Query: 167 -KSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMP 222
             S  EV+ EV  LF+   DLL EF  FLP++  +      P   +S+ ++     P
Sbjct: 204 GMSEEEVFTEVANLFRGQEDLLSEFGQFLPEAKRSLFTGNGPCEMHSVQKNEHDKTP 260


>gi|311249229|ref|XP_003123526.1| PREDICTED: paired amphipathic helix protein Sin3b [Sus scrofa]
          Length = 1121

 Score =  189 bits (480), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 105/258 (40%), Positives = 152/258 (58%), Gaps = 9/258 (3%)

Query: 498 QELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKN 557
           +E+D ++C+R   SYR LPK Y  P  S RT +  EVLND WVS  S SED +F   +K 
Sbjct: 383 REIDYASCKRIGSSYRALPKTYQQPKCSGRTAICKEVLNDTWVSFPSWSEDSTFVSSKKT 442

Query: 558 QYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TA 613
            YEE L RCED+RFELD++LE+   T + +E + +K++    +     R++D        
Sbjct: 443 PYEEQLHRCEDERFELDVVLETNLATIRVLESVQKKLSRMAPEDQEKFRLDDCLGGTSEV 502

Query: 614 LNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSK 673
           +  R I R+YGD   ++++ L+KN   A+PV+L RLK K+EEW   +  FNK+W E Y K
Sbjct: 503 IQRRAIHRIYGDKAPEIIESLKKNPVTAVPVVLKRLKAKEEEWREAQQGFNKIWREQYEK 562

Query: 674 NYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLE 733
            Y KSLDH++  FKQ D+K+L +K+L  EI+ + ++ +++          +  S  PHL 
Sbjct: 563 AYLKSLDHQAVNFKQNDTKALRSKSLLNEIESVYDEHQEQHS-----EGRSAPSSEPHLI 617

Query: 734 FEYSDPDIHEDLYQLIKY 751
           F Y D  I ED   LI Y
Sbjct: 618 FVYEDRQILEDAAALISY 635



 Score =  139 bits (350), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 86/212 (40%), Positives = 109/212 (51%), Gaps = 47/212 (22%)

Query: 33  GGGGGGGAQKLTTN--DALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARV 90
           G  G  G +KL  +  DAL YL  VK  F      Y+ FLE+MK+FK+Q IDT GVI RV
Sbjct: 23  GRSGSAGHEKLPVHVEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRV 82

Query: 91  KELFKGHRDLILGFNTFLPKGYEITLP--------------------------LEDEQP- 123
            +LF  H DLI+GFN FLP GY I +P                           + + P 
Sbjct: 83  SQLFHEHPDLIVGFNAFLPLGYRIDIPKNGKLNIQSPLSSQENSHNHSDCAENFKQQMPY 142

Query: 124 ---PPKKP-----VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSIT----- 170
               P+ P     VEF  AI++VNKIKTRF     +Y+SFL+IL+ Y+KE  S       
Sbjct: 143 KEDKPQVPLESDSVEFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLSTKGRPFR 202

Query: 171 -----EVYQEVEALFQDHPDLLEEFTHFLPDS 197
                EV+ EV  LF+   DLL EF  FLP++
Sbjct: 203 GMSEEEVFTEVANLFRGQEDLLSEFGQFLPEA 234



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 5/79 (6%)

Query: 351 QELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGF 408
           QE SF +KV+  L+    Y+ FLRC+ L+ +E+++ SEL  LV   LG++P+L   F  F
Sbjct: 302 QEFSFFDKVRRVLKSQEVYENFLRCIALFNQELVSGSELLQLVSPFLGKFPELFAQFKSF 361

Query: 409 LARCEKSEELLADVMSKKS 427
           L   E S    A  MS +S
Sbjct: 362 LGVKELS---FAPPMSDRS 377


>gi|242006023|ref|XP_002423856.1| Paired AMPhipathic helix protein Sin3A, putative [Pediculus humanus
           corporis]
 gi|212507090|gb|EEB11118.1| Paired AMPhipathic helix protein Sin3A, putative [Pediculus humanus
           corporis]
          Length = 1393

 Score =  189 bits (480), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 114/302 (37%), Positives = 176/302 (58%), Gaps = 15/302 (4%)

Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQ 558
           E+D S C+R   SY  LPK+Y+ P  S RT L  EVLND WVS  S SED +F   RK Q
Sbjct: 635 EIDYSTCKRLGASYCALPKSYVQPKCSGRTALCKEVLNDTWVSFPSWSEDSTFVTSRKTQ 694

Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TAL 614
           YEE ++RCED+RFELD+++E+   T + +E + +KI+  + +     R++D        +
Sbjct: 695 YEEYIYRCEDERFELDVVIETNGATVRVLEAVQKKISRMSPEEAQKFRLDDTLGGTSPTI 754

Query: 615 NLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKN 674
           ++R ++R+YGD   D++D L+KN  +A+PV+L RL+ K+EEW   +  FNK+W E   K 
Sbjct: 755 HVRALKRVYGDKASDMLDGLKKNPLVAIPVVLRRLRAKEEEWREAQKGFNKLWREQNEKY 814

Query: 675 YHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKK--RKEDDVLLA--IAAGNRRSIVP 730
           Y KSLDH+   FKQ D K+L +K L  EI+ + +++  + E++ L +  I  G      P
Sbjct: 815 YLKSLDHQGMNFKQSDLKALRSKGLFNEIETLFDERHEQNEENNLDSGQIITG------P 868

Query: 731 HLEFEYSDPDIHEDLYQLIKYSCGEMCTTEQLDK-VMKIWTTFLEPMLGVPSRPQGAEDT 789
           HL  +Y D  I +D   L+ +    +   ++ DK  MK+      P L   +R + ++D 
Sbjct: 869 HLILQYKDKSILDDAANLLIHHVKRLSGIQKDDKHKMKLILRHFIPDLFHHTRQELSDDE 928

Query: 790 ED 791
           +D
Sbjct: 929 KD 930



 Score =  106 bits (265), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 87/303 (28%), Positives = 130/303 (42%), Gaps = 63/303 (20%)

Query: 124 PPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI-------------T 170
           P  +PVEF  AIN+VNKIK RFQG    YK FL+IL+ Y+KE ++I              
Sbjct: 363 PQSQPVEFNHAINYVNKIKNRFQGQPDKYKRFLEILHTYQKEQRNIKEGTSGPGKHLTEA 422

Query: 171 EVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQVHVD 230
           EVY +V  LF+   DLL EF  FLPD++   +   VP   +  +  +S+ M ++      
Sbjct: 423 EVYSQVSKLFEHQEDLLAEFGQFLPDATSHLNSRNVPGVEHQNIVRKSANMKSSN----- 477

Query: 231 KKERAMASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERRDDHRRERERDDRDFE 290
               A+    D +     PD +  R  L       ++   + +R                
Sbjct: 478 ---YALNVSRDSNYIQTVPDREAPRGPLVGSGPVNKQSHSQLKR---------------- 518

Query: 291 NDVNRDFSMQRFPHKRKSARKIEDSTAEPLHQGGEGDENFGMHPVSSSYDDKNAMKSMFS 350
              +  FS      K K A   + + A+        D  F        +D     KS+ +
Sbjct: 519 ---SSSFSASGIQKKHKIASWRDVTLADAAKYASLSDYGF--------FD--KVRKSLKN 565

Query: 351 QELSFCEKVKDKLRDDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLA 410
           QE+             Y+ FLRCL L+ +EII++SEL  L+   LGR+P+ +  F  F+ 
Sbjct: 566 QEV-------------YENFLRCLTLFNEEIISKSELVQLITPFLGRFPEQLRWFKDFVG 612

Query: 411 RCE 413
             E
Sbjct: 613 FSE 615



 Score =  100 bits (248), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 52/99 (52%), Positives = 65/99 (65%), Gaps = 10/99 (10%)

Query: 19  ISSRGE---PSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKD 75
           +SS+G    PSG  Q          QKL   DAL+YL  VK  F  + + Y+DFL++MK+
Sbjct: 147 VSSQGPGTPPSGTPQ-------SNFQKLKVEDALSYLDQVKLKFGSEPQVYNDFLDIMKE 199

Query: 76  FKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEI 114
           FK+Q IDT GVI RV  LFKGH +LI+GFNTFLP GY+I
Sbjct: 200 FKSQSIDTPGVIQRVSNLFKGHPELIVGFNTFLPPGYKI 238



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 6/79 (7%)

Query: 123 PPPKKP------VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEV 176
           PP   P      ++ E+A+++++++K +F  +  VY  FLDI+  ++ ++     V Q V
Sbjct: 155 PPSGTPQSNFQKLKVEDALSYLDQVKLKFGSEPQVYNDFLDIMKEFKSQSIDTPGVIQRV 214

Query: 177 EALFQDHPDLLEEFTHFLP 195
             LF+ HP+L+  F  FLP
Sbjct: 215 SNLFKGHPELIVGFNTFLP 233



 Score = 44.3 bits (103), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 13/83 (15%)

Query: 40  AQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDF-KAQR------------IDTAGV 86
           +Q +  N A+ Y+  +K+ FQ + +KY  FLE++  + K QR            +  A V
Sbjct: 365 SQPVEFNHAINYVNKIKNRFQGQPDKYKRFLEILHTYQKEQRNIKEGTSGPGKHLTEAEV 424

Query: 87  IARVKELFKGHRDLILGFNTFLP 109
            ++V +LF+   DL+  F  FLP
Sbjct: 425 YSQVSKLFEHQEDLLAEFGQFLP 447


>gi|334327048|ref|XP_003340825.1| PREDICTED: paired amphipathic helix protein Sin3b [Monodelphis
           domestica]
          Length = 1122

 Score =  189 bits (479), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 106/271 (39%), Positives = 157/271 (57%), Gaps = 9/271 (3%)

Query: 498 QELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKN 557
           +E+D ++C+R   SYR LPK Y  P  S RT +  EVLND WVS  S SED +F   +K 
Sbjct: 387 REIDYASCKRIGSSYRALPKTYQQPKCSGRTAICKEVLNDTWVSFPSWSEDSTFVSSKKT 446

Query: 558 QYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TA 613
            YEE L RCED+RFELD++LE+   T + +E + +K++  + +     R++D        
Sbjct: 447 PYEEQLHRCEDERFELDVVLETNLATIRVLESVQKKLSRMSPEDQEKFRLDDCLGGTSEV 506

Query: 614 LNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSK 673
           +  R I R+YGD   ++++ L+KN   A+PV+L RLK K+EEW   +  FNK+W E Y K
Sbjct: 507 IQRRAIYRIYGDKAPEIIESLKKNPVTAVPVVLKRLKAKEEEWREAQQGFNKIWREQYEK 566

Query: 674 NYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLE 733
            Y KSLDH++  FKQ D+K+L +K+L  EI+ + ++ +++     +          PHL 
Sbjct: 567 AYLKSLDHQAVNFKQNDTKALRSKSLLNEIESVYDEHQEQHSEGRSAPTNE-----PHLI 621

Query: 734 FEYSDPDIHEDLYQLIKYSCGEMCTTEQLDK 764
           F Y D  I ED   LI Y      T ++ D+
Sbjct: 622 FVYEDKQILEDAASLISYYVKRQPTIQKEDQ 652



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 89/228 (39%), Positives = 114/228 (50%), Gaps = 47/228 (20%)

Query: 33  GGGGGGGAQKLTTN--DALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARV 90
           G  G    +KL  +  DAL+YL  VK  F      Y+ FLE+MK+FK+Q IDT GVI RV
Sbjct: 27  GRAGPTAQEKLPVHVEDALSYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRV 86

Query: 91  KELFKGHRDLILGFNTFLPKGYEITLP----LEDEQP----------------------- 123
            +LF  H DLI+GFN FLP GY I +P    L  + P                       
Sbjct: 87  SQLFHEHPDLIVGFNAFLPLGYRIEIPKNGKLSIQAPLTSQENSHHHSDSADDYKQQLLY 146

Query: 124 ---PPKKP-----VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSIT----- 170
               P+ P     VEF  AI++VNKIKTRF     +Y+SFL+IL+ Y+KE  S       
Sbjct: 147 KEDKPQGPLESDSVEFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLSTKGRPFR 206

Query: 171 -----EVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSI 213
                EV+ EV  LF+   DLL EF  FLP++  +      P   NS+
Sbjct: 207 GMSEEEVFTEVANLFRGQEDLLSEFGQFLPEAKRSLFTGNGPCEMNSV 254



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 5/79 (6%)

Query: 351 QELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGF 408
           QE SF +KV+  L+    Y+ FLRC+ L+ +E+++ SEL  LV   LG++P+L   F  F
Sbjct: 306 QEFSFFDKVRRVLKSQEVYENFLRCIALFNQELVSGSELLQLVTPFLGKFPELFAQFKSF 365

Query: 409 LARCEKSEELLADVMSKKS 427
           L   E S    A  MS +S
Sbjct: 366 LGVKELS---FAPPMSDRS 381


>gi|52138513|ref|NP_056075.1| paired amphipathic helix protein Sin3b [Homo sapiens]
 gi|68067946|sp|O75182.2|SIN3B_HUMAN RecName: Full=Paired amphipathic helix protein Sin3b; AltName:
           Full=Histone deacetylase complex subunit Sin3b; AltName:
           Full=Transcriptional corepressor Sin3b
 gi|51449915|gb|AAU01916.1| SIN3B long isoform [Homo sapiens]
 gi|225000164|gb|AAI72412.1| SIN3 homolog B, transcription regulator (yeast) [synthetic
           construct]
          Length = 1162

 Score =  189 bits (479), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 137/408 (33%), Positives = 202/408 (49%), Gaps = 49/408 (12%)

Query: 351 QELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGF 408
           QE SF +KV+  L+    Y+ FLRC+ L+ +E+++ SEL  LV   LG++P+L   F  F
Sbjct: 306 QEFSFFDKVRRVLKSQEVYENFLRCIALFNQELVSGSELLQLVSPFLGKFPELFAQFKSF 365

Query: 409 LARCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRL 468
           L   E S    A  MS +S                         DG+  R+ +     R+
Sbjct: 366 LGVKELS---FAPPMSDRS------------------------GDGI-SREIDYASCKRI 397

Query: 469 DKSVAFVNKDV-GPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQR 527
             S   + K    PK S  ++  K L            + C   ++       IP  S  
Sbjct: 398 GSSYRALPKTYQQPKCSGRTAICKELDHWTLLQGSWTDDYCMSKFK---NTCWIPGYS-- 452

Query: 528 TELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRV 587
               A VLND WVS  S SED +F   +K  YEE L RCED+RFELD++LE+   T + +
Sbjct: 453 ----AGVLNDTWVSFPSWSEDSTFVSSKKTPYEEQLHRCEDERFELDVVLETNLATIRVL 508

Query: 588 EELLEKINNNTIKTDGPIRVEDHF----TALNLRCIERLYGDHGLDVMDVLRKNASLALP 643
           E + +K++    +     R++D        +  R I R+YGD   ++++ L+KN   A+P
Sbjct: 509 ESVQKKLSRMAPEDQEKFRLDDSLGGTSEVIQRRAIYRIYGDKAPEIIESLKKNPVTAVP 568

Query: 644 VILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEI 703
           V+L RLK K+EEW   +  FNK+W E Y K Y KSLDH++  FKQ D+K+L +K+L  EI
Sbjct: 569 VVLKRLKAKEEEWREAQQGFNKIWREQYEKAYLKSLDHQAVNFKQNDTKALRSKSLLNEI 628

Query: 704 KEISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLIKY 751
           + + ++ +++          +  S  PHL F Y D  I ED   LI Y
Sbjct: 629 ESVYDEHQEQHS-----EGRSAPSSEPHLIFVYEDRQILEDAAALISY 671



 Score =  139 bits (350), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 92/237 (38%), Positives = 119/237 (50%), Gaps = 47/237 (19%)

Query: 33  GGGGGGGAQKLTTN--DALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARV 90
           G  G  G +KL  +  DAL YL  VK  F      Y+ FLE+MK+FK+Q IDT GVI RV
Sbjct: 27  GRSGSAGHEKLPVHVEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRV 86

Query: 91  KELFKGHRDLILGFNTFLPKGYEITLP-----------------------LED--EQPP- 124
            +LF  H DLI+GFN FLP GY I +P                        ED  +Q P 
Sbjct: 87  SQLFHEHPDLIVGFNAFLPLGYRIDIPKNGKLNIQSPLTSQENSHNHGDGAEDFKQQVPY 146

Query: 125 ----PKKP-----VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKEN--------- 166
               P+ P     VEF  AI++VNKIKTRF     +Y+SFL+IL+ Y+KE          
Sbjct: 147 KEDKPQVPLESDSVEFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLNTRGRPFR 206

Query: 167 -KSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMP 222
             S  EV+ EV  LF+   DLL EF  FLP++  +      P   +S+ ++     P
Sbjct: 207 GMSEEEVFTEVANLFRGQEDLLSEFGQFLPEAKRSLFTGNGPCEMHSVQKNEHDKTP 263


>gi|402904671|ref|XP_003915165.1| PREDICTED: paired amphipathic helix protein Sin3b [Papio anubis]
          Length = 1162

 Score =  188 bits (478), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 137/408 (33%), Positives = 202/408 (49%), Gaps = 49/408 (12%)

Query: 351 QELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGF 408
           QE SF +KV+  L+    Y+ FLRC+ L+ +E+++ SEL  LV   LG++P+L   F  F
Sbjct: 303 QEFSFFDKVRRVLKSQEVYENFLRCIALFNQELVSGSELLQLVSPFLGKFPELFAQFKSF 362

Query: 409 LARCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRL 468
           L   E S    A  MS +S                         DG+  R+ +     R+
Sbjct: 363 LGVKELS---FAPPMSDRS------------------------GDGI-SREIDYASCKRI 394

Query: 469 DKSVAFVNKDV-GPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQR 527
             S   + K    PK S  ++  K L            + C   ++       IP  S  
Sbjct: 395 GSSYRALPKTYQQPKCSGRTAICKELDHWTLLQGSWTDDYCMSKFK---STCWIPGYS-- 449

Query: 528 TELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRV 587
               A VLND WVS  S SED +F   +K  YEE L RCED+RFELD++LE+   T + +
Sbjct: 450 ----AGVLNDTWVSFPSWSEDSTFVSSKKTPYEEQLHRCEDERFELDVVLETNLATIRVL 505

Query: 588 EELLEKINNNTIKTDGPIRVEDHF----TALNLRCIERLYGDHGLDVMDVLRKNASLALP 643
           E + +K++    +     R++D        +  R I R+YGD   ++++ L+KN   A+P
Sbjct: 506 ESVQKKLSRMAPEDQEKFRLDDSLGGTSEVIQRRAIYRIYGDKAPEIIESLKKNPVTAVP 565

Query: 644 VILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEI 703
           V+L RLK K+EEW   +  FNK+W E Y K Y KSLDH++  FKQ D+K+L +K+L  EI
Sbjct: 566 VVLKRLKAKEEEWREAQQGFNKIWREQYEKAYLKSLDHQAVNFKQNDTKALRSKSLLNEI 625

Query: 704 KEISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLIKY 751
           + + ++ +++          +  S  PHL F Y D  I ED   LI Y
Sbjct: 626 ESVYDEHQEQHS-----EGRSAPSSEPHLIFVYEDRQILEDAAALISY 668



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 92/237 (38%), Positives = 119/237 (50%), Gaps = 47/237 (19%)

Query: 33  GGGGGGGAQKLTTN--DALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARV 90
           G  G  G +KL  +  DAL YL  VK  F      Y+ FLE+MK+FK+Q IDT GVI RV
Sbjct: 24  GRSGSAGHEKLPVHVEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRV 83

Query: 91  KELFKGHRDLILGFNTFLPKGYEITLP-----------------------LED--EQPP- 124
            +LF  H DLI+GFN FLP GY I +P                        ED  +Q P 
Sbjct: 84  SQLFHEHPDLIVGFNAFLPLGYRIDIPKNGKLNIQSPLTSQENSHNHGDGAEDFKQQVPY 143

Query: 125 ----PKKP-----VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKEN--------- 166
               P+ P     VEF  AI++VNKIKTRF     +Y+SFL+IL+ Y+KE          
Sbjct: 144 KEDKPQVPLESDSVEFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLNTRGRPFR 203

Query: 167 -KSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMP 222
             S  EV+ EV  LF+   DLL EF  FLP++  +      P   +S+ ++     P
Sbjct: 204 GMSEEEVFTEVANLFRGQEDLLSEFGQFLPEAKRSLFTGNGPCEMHSVQKNEHDKTP 260


>gi|432856248|ref|XP_004068426.1| PREDICTED: paired amphipathic helix protein Sin3b-like [Oryzias
           latipes]
          Length = 1216

 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 109/275 (39%), Positives = 156/275 (56%), Gaps = 8/275 (2%)

Query: 498 QELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKN 557
           +E+D ++C+R   SYR LPK Y  P  S RT L  EVLND WVS  S SED +F   +K 
Sbjct: 442 REVDYASCKRLGSSYRALPKTYQQPKCSGRTALCKEVLNDTWVSFPSWSEDSTFVSSKKT 501

Query: 558 QYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TA 613
            YEE L RCED+RFELD++LE+   T + +E + +K+   + +     R++D        
Sbjct: 502 PYEEQLHRCEDERFELDVVLETNLATIRVLESVQKKLARLSPEDQDRFRLDDCLGGTSEV 561

Query: 614 LNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSK 673
           +  R + R+YGD   ++++ L+++ + A+PV+L RLK K+EEW   +  FNK+W E Y K
Sbjct: 562 IQRRSVYRIYGDKAPEIIEGLKRSPATAVPVVLKRLKAKEEEWREAQQGFNKIWREQYEK 621

Query: 674 NYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEI----SEKKRKEDDVLLAIAAGNRRSIV 729
            Y KSLDH+   FKQ D K+L +K+L  EI+ I     E+  +E  V      G+  +  
Sbjct: 622 AYLKSLDHQGVNFKQNDMKALRSKSLLNEIESIYDERQEQSTEEGGVGQQSRNGSASTSE 681

Query: 730 PHLEFEYSDPDIHEDLYQLIKYSCGEMCTTEQLDK 764
           PH+ F Y D  I ED   LI Y      T  + DK
Sbjct: 682 PHMVFTYEDKQILEDAAALIIYHVKRQPTIHKDDK 716



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 43/76 (56%), Positives = 53/76 (69%)

Query: 42  KLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLI 101
           KL   DAL+YL  VK  F +    Y+ FL++MK+FK+Q IDT GVI RV +LF GH DL+
Sbjct: 35  KLKVEDALSYLDQVKIRFANDPGIYNKFLDIMKEFKSQSIDTPGVINRVSQLFHGHPDLV 94

Query: 102 LGFNTFLPKGYEITLP 117
           LGFN FLP GY I +P
Sbjct: 95  LGFNAFLPPGYRIEIP 110



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 42/107 (39%), Positives = 61/107 (57%), Gaps = 23/107 (21%)

Query: 114 ITLPLEDEQ----------PPPKK--PVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNM 161
           ++LPL  E           PP  +  PVEF+ AI++VNKIK RF     +Y++FL+IL+ 
Sbjct: 183 LSLPLTKESHNPAAVSSVSPPASETSPVEFDSAISYVNKIKNRFLDHPEIYRAFLEILHT 242

Query: 162 YRKE---------NKSIT--EVYQEVEALFQDHPDLLEEFTHFLPDS 197
           Y+KE         +  +T  EV+ +V +LF+   DLL EF  FLPD+
Sbjct: 243 YQKEQLEAKESRGSSGMTEDEVFSKVASLFKGQEDLLAEFGQFLPDA 289



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 40/67 (59%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           ++ E+A+++++++K RF  D  +Y  FLDI+  ++ ++     V   V  LF  HPDL+ 
Sbjct: 36  LKVEDALSYLDQVKIRFANDPGIYNKFLDIMKEFKSQSIDTPGVINRVSQLFHGHPDLVL 95

Query: 189 EFTHFLP 195
            F  FLP
Sbjct: 96  GFNAFLP 102



 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 24/62 (38%), Positives = 40/62 (64%), Gaps = 2/62 (3%)

Query: 351 QELSFCEKVKD--KLRDDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGF 408
           +E SF +KV+   K ++ Y+ FLRC+ L+ +E+++ +EL  LV   LG++P+L   F  F
Sbjct: 359 REFSFFDKVRRLFKSQEVYENFLRCIALFNQEVVSGAELLQLVTPFLGKFPELYSQFKSF 418

Query: 409 LA 410
           L 
Sbjct: 419 LG 420



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 47/210 (22%), Positives = 87/210 (41%), Gaps = 60/210 (28%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRID------TAG-----VIARVKELF 94
           + A++Y+  +K+ F D  E Y  FLE++  ++ ++++      ++G     V ++V  LF
Sbjct: 213 DSAISYVNKIKNRFLDHPEIYRAFLEILHTYQKEQLEAKESRGSSGMTEDEVFSKVASLF 272

Query: 95  KGHRDLILGFNTFLP-------KGYEIT-------------------------LPLEDEQ 122
           KG  DL+  F  FLP        G  +T                         + L+   
Sbjct: 273 KGQEDLLAEFGQFLPDAKRSLFTGSSLTGSKEPLKKSEEDDVSSKQNKKRPRPVLLQHMS 332

Query: 123 PPPKKPVEFE----------------EAINFVNKIKTRFQGDDHVYKSFLDILNMYRKEN 166
           P  KK +++                    +F +K++  F+  + VY++FL  + ++ +E 
Sbjct: 333 PLLKKKMKYSCTKDPSFASAGKHGVLREFSFFDKVRRLFKSQE-VYENFLRCIALFNQEV 391

Query: 167 KSITEVYQEVEALFQDHPDLLEEFTHFLPD 196
            S  E+ Q V       P+L  +F  FL D
Sbjct: 392 VSGAELLQLVTPFLGKFPELYSQFKSFLGD 421


>gi|432851207|ref|XP_004066908.1| PREDICTED: paired amphipathic helix protein Sin3a-like [Oryzias
           latipes]
          Length = 1292

 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 105/285 (36%), Positives = 164/285 (57%), Gaps = 10/285 (3%)

Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQ 558
           E+D ++C+R   SYR LPK+Y  P  + RT L  EVLND WVS  S SED +F   +K Q
Sbjct: 564 EIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCREVLNDTWVSFPSWSEDSTFVSSKKTQ 623

Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TAL 614
           YEE ++RCED+RFELD++LE+   T + +E +  KI+  + +     R+++        +
Sbjct: 624 YEEHIYRCEDERFELDIVLETNLATIRVLETVQRKISRMSAEEQLRFRLDNTLGGSSEVI 683

Query: 615 NLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKN 674
           + + I+R+YGD   D++D L++N ++++P++L RLK K EEW   +  FNK+W E   K 
Sbjct: 684 HRKAIQRIYGDKAHDIIDGLKRNPAVSVPIVLKRLKMKDEEWREAQRGFNKIWREQNEKY 743

Query: 675 YHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEF 734
           Y KSLDH+   FKQ D+K L +K L  EI+ + +++++      +   G      PH+ F
Sbjct: 744 YLKSLDHQGINFKQNDTKMLRSKTLLNEIEMLYDERQERT----SEETGTPPPSSPHMTF 799

Query: 735 EYSDPDIHEDLYQLIKYSCGEMCTTEQLD--KVMKIWTTFLEPML 777
            Y D  I ED   LI +        ++ D  K+ +I   F+  +L
Sbjct: 800 TYDDSQILEDAAALIIHHVKRQVGIQKEDKFKIKQIINHFIPDLL 844



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 46/80 (57%), Positives = 60/80 (75%)

Query: 41  QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDL 100
           Q+L   DAL+YL  VK  F ++ + Y+DFL++MK+FK+Q IDT GVI RV +LFKGH DL
Sbjct: 123 QRLKVEDALSYLDQVKLQFGNQPQVYNDFLDIMKEFKSQSIDTPGVINRVSQLFKGHPDL 182

Query: 101 ILGFNTFLPKGYEITLPLED 120
           I+GFNTFLP GY+I +   D
Sbjct: 183 IMGFNTFLPPGYKIEVQTND 202



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 51/146 (34%), Positives = 78/146 (53%), Gaps = 24/146 (16%)

Query: 117 PLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI------- 169
           PL++ QP     VEF  AIN+VNKIK RFQG   +YK+FL+IL+ Y+KE ++        
Sbjct: 310 PLQNNQP-----VEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNY 364

Query: 170 ------TEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPT 223
                  EVY +V  LF++  DLL EF  FLPD++ +  ++     R   +R+      T
Sbjct: 365 TPALTEQEVYTQVARLFKNQEDLLSEFGQFLPDANNSVLLNKTAPDRAESVRNDHGG--T 422

Query: 224 ARQVHVDKKERAMASHADRDLSVDRP 249
            ++  ++ K+R     +   L + RP
Sbjct: 423 VKRPLLNNKQRL----SQNGLPIKRP 444



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/68 (45%), Positives = 43/68 (63%), Gaps = 2/68 (2%)

Query: 350 SQELSFCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNG 407
           S E  F EKVK  LR  + Y+ FLRCL+++ +E+I+R+EL  LV   LG++P+L   F  
Sbjct: 475 STETMFFEKVKKALRSAEGYENFLRCLYIFNQEVISRTELVQLVIPFLGKFPELFTWFKN 534

Query: 408 FLARCEKS 415
           FL   E S
Sbjct: 535 FLGYRESS 542



 Score = 53.1 bits (126), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 27/95 (28%), Positives = 48/95 (50%), Gaps = 14/95 (14%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           ++ E+A+++++++K +F     VY  FLDI+  ++ ++     V   V  LF+ HPDL+ 
Sbjct: 125 LKVEDALSYLDQVKLQFGNQPQVYNDFLDIMKEFKSQSIDTPGVINRVSQLFKGHPDLIM 184

Query: 189 EFTHFLP-------------DSSGAASIHYV-PSG 209
            F  FLP             + +    IHY+ P G
Sbjct: 185 GFNTFLPPGYKIEVQTNDLVNVTTPGQIHYITPHG 219


>gi|431921961|gb|ELK19134.1| NACHT and WD repeat domain-containing protein 1 [Pteropus alecto]
          Length = 2630

 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 105/258 (40%), Positives = 152/258 (58%), Gaps = 9/258 (3%)

Query: 498  QELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKN 557
            +E+D ++C+R   SYR LPK Y  P  S RT +  EVLND WVS  S SED +F   +K 
Sbjct: 1887 REIDYASCKRIGSSYRALPKTYQQPKCSGRTAICKEVLNDTWVSFPSWSEDSTFVSSKKT 1946

Query: 558  QYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFT----A 613
             YEE L RCED+RFELD++LE+   T + +E + +K++    +     R++D        
Sbjct: 1947 PYEEQLHRCEDERFELDVVLETNLATIRVLESVQKKLSRMAPEDQEKFRLDDCLGGTSEV 2006

Query: 614  LNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSK 673
            +  R I R+YGD   ++++ L+KN   A+PV+L RLK K+EEW   +  FNK+W E Y K
Sbjct: 2007 IQRRAIHRIYGDKAPEIIESLKKNPVTAVPVVLKRLKAKEEEWREAQQGFNKIWREQYEK 2066

Query: 674  NYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLE 733
             Y KSLDH++  FKQ D+K+L +K+L  EI+ + ++ +++          +  S  PHL 
Sbjct: 2067 AYLKSLDHQAVNFKQNDTKALRSKSLLNEIESVYDEHQEQHS-----EGRSAPSSEPHLI 2121

Query: 734  FEYSDPDIHEDLYQLIKY 751
            F Y D  I ED   LI Y
Sbjct: 2122 FVYEDRQILEDAAALISY 2139



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 84/215 (39%), Positives = 106/215 (49%), Gaps = 45/215 (20%)

Query: 44   TTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILG 103
               DAL YL  VK  F      Y+ FLE+MK+FK+Q IDT GVI RV +LF  H DLI+G
Sbjct: 1540 AVEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRVSQLFHEHPDLIVG 1599

Query: 104  FNTFLPKGYEITLPL---------------------------------EDEQPPPKKP-- 128
            FN FLP GY I +P                                  ED+   P +   
Sbjct: 1600 FNAFLPLGYRIDIPKNGKLNIQSPLSSQENSHNHSDCAENFKQQLLYKEDKAQVPLESDS 1659

Query: 129  VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSIT----------EVYQEVEA 178
            VEF  AI++VNKIKTRF     +Y+SFL+IL+ Y+KE  S            EV+ EV  
Sbjct: 1660 VEFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLSTKGRPFRGMSEEEVFTEVAN 1719

Query: 179  LFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSI 213
            LF+   DLL EF  FLP++  +      P   NS+
Sbjct: 1720 LFRGQEDLLSEFGQFLPEAKRSLFTGNGPCEMNSV 1754



 Score = 57.4 bits (137), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 5/79 (6%)

Query: 351  QELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGF 408
            QE SF +KV+  L+    Y+ FLRC+ L+ +E+++ SEL  LV   LG++P+L   F  F
Sbjct: 1806 QEFSFFDKVRRVLKSQEVYENFLRCIALFNQELVSGSELLQLVSPFLGKFPELFAQFKSF 1865

Query: 409  LARCEKSEELLADVMSKKS 427
            L   E S    A  MS +S
Sbjct: 1866 LGVKELS---FAPPMSDRS 1881


>gi|426387688|ref|XP_004060295.1| PREDICTED: paired amphipathic helix protein Sin3b [Gorilla gorilla
           gorilla]
          Length = 1137

 Score =  188 bits (477), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 137/408 (33%), Positives = 202/408 (49%), Gaps = 49/408 (12%)

Query: 351 QELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGF 408
           QE SF +KV+  L+    Y+ FLRC+ L+ +E+++ SEL  LV   LG++P+L   F  F
Sbjct: 281 QEFSFFDKVRRVLKSQEVYENFLRCIALFNQELVSGSELLQLVSPFLGKFPELFAQFKSF 340

Query: 409 LARCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRL 468
           L   E S    A  MS +S                         DG+  R+ +     R+
Sbjct: 341 LGVKELS---FAPPMSDRS------------------------GDGI-SREIDYASCKRI 372

Query: 469 DKSVAFVNKDV-GPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQR 527
             S   + K    PK S  ++  K L            + C   ++       IP  S  
Sbjct: 373 GSSYRALPKTYQQPKCSGRTAICKELDHWTLLQGSWTDDYCMSKFK---NTCWIPGYS-- 427

Query: 528 TELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRV 587
               A VLND WVS  S SED +F   +K  YEE L RCED+RFELD++LE+   T + +
Sbjct: 428 ----AGVLNDTWVSFPSWSEDSTFVSSKKTPYEEQLHRCEDERFELDVVLETNLATIRVL 483

Query: 588 EELLEKINNNTIKTDGPIRVEDHF----TALNLRCIERLYGDHGLDVMDVLRKNASLALP 643
           E + +K++    +     R++D        +  R I R+YGD   ++++ L+KN   A+P
Sbjct: 484 ESVQKKLSRMAPEDQEKFRLDDSLGGTSEVIQRRAIYRIYGDKAPEIIESLKKNPVTAVP 543

Query: 644 VILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEI 703
           V+L RLK K+EEW   +  FNK+W E Y K Y KSLDH++  FKQ D+K+L +K+L  EI
Sbjct: 544 VVLKRLKAKEEEWREAQQGFNKIWREQYEKAYLKSLDHQAVNFKQNDTKALRSKSLLNEI 603

Query: 704 KEISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLIKY 751
           + + ++ +++          +  S  PHL F Y D  I ED   LI Y
Sbjct: 604 ESVYDEHQEQHS-----EGRSAPSSEPHLIFVYEDRQILEDAAALISY 646



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 87/223 (39%), Positives = 112/223 (50%), Gaps = 45/223 (20%)

Query: 45  TNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGF 104
             DAL YL  VK  F      Y+ FLE+MK+FK+Q IDT GVI RV +LF  H DLI+GF
Sbjct: 16  VEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRVSQLFHEHPDLIVGF 75

Query: 105 NTFLPKGYEITLP-----------------------LED--EQPP-----PKKP-----V 129
           N FLP GY I +P                        ED  +Q P     P+ P     V
Sbjct: 76  NAFLPLGYRIDIPKNGKLNIQSPLTSQENSHNHGDGAEDFKQQVPYKEDKPQVPLESDSV 135

Query: 130 EFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKEN----------KSITEVYQEVEAL 179
           EF  AI++VNKIKTRF     +Y+SFL+IL+ Y+KE            S  EV+ EV  L
Sbjct: 136 EFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLNTRGRPFRGMSEEEVFTEVANL 195

Query: 180 FQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMP 222
           F+   DLL EF  FLP++  +      P   +S+ ++     P
Sbjct: 196 FRGQEDLLSEFGQFLPEAKRSLFTGNGPCEMHSVQKNEHDKTP 238


>gi|348556976|ref|XP_003464296.1| PREDICTED: paired amphipathic helix protein Sin3b [Cavia porcellus]
          Length = 1105

 Score =  188 bits (477), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 107/282 (37%), Positives = 161/282 (57%), Gaps = 11/282 (3%)

Query: 498 QELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKN 557
           +E+D ++C+R   SYR LPK Y  P  S RT +  EVLND WVS  S SED +F   +K 
Sbjct: 379 REIDYASCKRIGSSYRALPKTYQQPRCSGRTAICKEVLNDTWVSFPSWSEDSTFVSSKKT 438

Query: 558 QYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFTA---- 613
            YEE L RCED+RFELD++LE+   T + +E + +K++    +     R++D        
Sbjct: 439 PYEEQLHRCEDERFELDVVLETNLATIRVLESVQKKLSRMAPEDQERFRLDDALGGTSEV 498

Query: 614 LNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSK 673
           +  R I R+YGD   ++++ L+K+   A+PV+L RLK K+EEW   +  FNK+W E Y K
Sbjct: 499 IQRRAIHRIYGDKAPEIIESLKKSPVAAVPVVLKRLKAKEEEWREAQQGFNKIWREQYEK 558

Query: 674 NYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLE 733
            Y KSLDH++  FKQ D+K+L +K+L  EI+ + ++ +++     +  A       PHL 
Sbjct: 559 AYLKSLDHQAVNFKQNDTKALRSKSLLNEIESVYDEHQEQHSEGRSAPASE-----PHLI 613

Query: 734 FEYSDPDIHEDLYQLIKYSCGEMCTTEQLDK--VMKIWTTFL 773
           F Y D  I ED   LI Y        ++ D+  + ++   FL
Sbjct: 614 FVYEDRQILEDAAALISYYVARQPAIQKEDQATIQQLLRRFL 655



 Score =  140 bits (353), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 91/226 (40%), Positives = 117/226 (51%), Gaps = 53/226 (23%)

Query: 23  GEPSGQTQVVGGG-----GGGGAQKLTTN--DALAYLKAVKDIFQDKREKYDDFLEVMKD 75
           G P+G+   +GG      G  G +KL  +  DAL YL  VK  F      Y+ FLE+MK+
Sbjct: 7   GVPAGRG--LGGARWGRSGSAGHEKLPVHVEDALTYLDQVKIRFGSDPATYNGFLEIMKE 64

Query: 76  FKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLP------------------ 117
           FK+Q IDT GVI RV +LF  H DLI+GFN FLP GY I +P                  
Sbjct: 65  FKSQSIDTPGVIRRVSQLFHEHPDLIVGFNAFLPLGYRIDIPRNSRINMQSPLSGQENVH 124

Query: 118 -----LEDEQPPPKK-----------PVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNM 161
                +ED +  P K            VEF  AI++VNKIKTRF     +Y+SFL+IL+ 
Sbjct: 125 GHGDCVEDLKQVPNKEDKAVAPLEADSVEFNNAISYVNKIKTRFLDHPEIYRSFLEILHT 184

Query: 162 YRKE----------NKSITEVYQEVEALFQDHPDLLEEFTHFLPDS 197
           Y+KE            S  EV+ EV +LF+   DLL EF  FLP++
Sbjct: 185 YQKEQLHTKGRPFRGMSEEEVFTEVASLFRGQEDLLSEFGQFLPEA 230



 Score = 56.2 bits (134), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/67 (40%), Positives = 41/67 (61%), Gaps = 2/67 (2%)

Query: 351 QELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGF 408
           QE SF +KV+  L+    Y+ FLRC+ L+ +E+++ +EL  LV   LG++P+L   F  F
Sbjct: 298 QEFSFFDKVRRVLKSQEVYENFLRCIALFNQELVSGAELLQLVSPFLGKFPELFAQFKSF 357

Query: 409 LARCEKS 415
           L   E S
Sbjct: 358 LGVKELS 364


>gi|301616148|ref|XP_002937523.1| PREDICTED: paired amphipathic helix protein Sin3a-like [Xenopus
           (Silurana) tropicalis]
          Length = 1280

 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 106/288 (36%), Positives = 170/288 (59%), Gaps = 17/288 (5%)

Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQ 558
           E+D ++C+R   SYR LPK++  P  + RT L  EVLND WVS  S SED +F   +K Q
Sbjct: 552 EIDYASCKRLGSSYRALPKSFQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVSSKKTQ 611

Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TAL 614
           YEE ++RCED+RFELD++LE+   T + +E + +K++  + +     R+++        +
Sbjct: 612 YEEHIYRCEDERFELDVVLETNLATIRVLETIQKKLSRLSAEDQAKFRLDNTLGGTSEVI 671

Query: 615 NLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKN 674
           + + ++R+Y D   D++D L+KN ++A+P++L RLK K+EEW   +  FNK+W E   K 
Sbjct: 672 HRKALQRIYADKAADIIDGLKKNPAVAVPIVLKRLKMKEEEWREAQRGFNKIWREQNEKY 731

Query: 675 YHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRK---EDDVLLAIAAGNRRSIVPH 731
           Y KSLDH+   +KQ D+K L +K+L  EI+ I +++++   ED+    I++G      PH
Sbjct: 732 YLKSLDHQGINYKQIDTKVLRSKSLLNEIESIYDERQEQASEDNS--GISSG------PH 783

Query: 732 LEFEYSDPDIHEDLYQLIKYSCGEMCTTEQLD--KVMKIWTTFLEPML 777
           L   Y D  I ED   LI +        ++ D  K+ +I   F+  +L
Sbjct: 784 LTLTYDDKQILEDAASLIIHHVKRQTGIQKEDKYKIKQIVYHFIPDLL 831



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 50/107 (46%), Positives = 68/107 (63%), Gaps = 5/107 (4%)

Query: 19  ISSRGEPSGQTQV-----VGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVM 73
           + S G P+ Q+            G   Q+L   DAL+YL  VK  F  + + Y+DFL++M
Sbjct: 94  VPSHGGPAVQSHAHSTPPAAPAQGQQFQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIM 153

Query: 74  KDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLED 120
           K+FK+Q IDT GVI+RV +LFKGH +LI+GFNTFLP GY+I +   D
Sbjct: 154 KEFKSQSIDTPGVISRVSQLFKGHPELIMGFNTFLPPGYKIEVQTND 200



 Score = 82.8 bits (203), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 41/90 (45%), Positives = 56/90 (62%), Gaps = 13/90 (14%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI-------------TEVY 173
           +PVEF  AIN+VNKIK RFQG   +YKSFL+IL+ Y+KE ++               EVY
Sbjct: 306 QPVEFNHAINYVNKIKNRFQGQPDIYKSFLEILHTYQKEQRNAKEAGGNYTPALTEQEVY 365

Query: 174 QEVEALFQDHPDLLEEFTHFLPDSSGAASI 203
            +V  LF++  DLL EF  FLPD++ +  +
Sbjct: 366 AQVARLFKNQEDLLSEFGQFLPDANSSVLL 395



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 2/66 (3%)

Query: 352 ELSFCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFL 409
           E  F +KV+  LR  + Y  FLRCL ++ +E+I+RSEL  LV   L ++P+L   F  FL
Sbjct: 470 ESQFFDKVRKALRSGEAYDNFLRCLVIFNQEVISRSELVQLVSPFLAKFPELFTWFKNFL 529

Query: 410 ARCEKS 415
              E S
Sbjct: 530 GYKESS 535



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 8/80 (10%)

Query: 124 PPKKP--------VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQE 175
           PP  P        ++ E+A+++++++K +F     VY  FLDI+  ++ ++     V   
Sbjct: 110 PPAAPAQGQQFQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISR 169

Query: 176 VEALFQDHPDLLEEFTHFLP 195
           V  LF+ HP+L+  F  FLP
Sbjct: 170 VSQLFKGHPELIMGFNTFLP 189



 Score = 42.0 bits (97), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 13/82 (15%)

Query: 41  QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDT--AG-----------VI 87
           Q +  N A+ Y+  +K+ FQ + + Y  FLE++  ++ ++ +   AG           V 
Sbjct: 306 QPVEFNHAINYVNKIKNRFQGQPDIYKSFLEILHTYQKEQRNAKEAGGNYTPALTEQEVY 365

Query: 88  ARVKELFKGHRDLILGFNTFLP 109
           A+V  LFK   DL+  F  FLP
Sbjct: 366 AQVARLFKNQEDLLSEFGQFLP 387


>gi|410908081|ref|XP_003967519.1| PREDICTED: paired amphipathic helix protein Sin3a-like [Takifugu
           rubripes]
          Length = 1271

 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 166/287 (57%), Gaps = 15/287 (5%)

Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQ 558
           E+D ++C+R   SYR LPK+Y  P  + RT L   VLND WVS  S SED +F   +K Q
Sbjct: 548 EIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKGVLNDTWVSFPSWSEDSTFVSSKKTQ 607

Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFTA----L 614
           YEE ++RCED+RFELD++LE+     + +E +  K++  + +    +R++         +
Sbjct: 608 YEEHIYRCEDERFELDVVLETNLAAIRALETVQRKLSRMSAEEQAKLRLDSTLGGSSEVI 667

Query: 615 NLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKN 674
           + + I+R+YGD   D++D L+KN ++++P++L RLK K+EEW   +  FNK+W E   K 
Sbjct: 668 HRKAIQRIYGDKAPDIIDGLKKNPAVSVPIVLKRLKTKEEEWREAQRGFNKIWREQNEKY 727

Query: 675 YHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIV--PHL 732
           Y KSLDH+   FKQ D+K L +K+L  EI+ I ++++++       A+    S +  PHL
Sbjct: 728 YLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQ-------ASEENASPLSGPHL 780

Query: 733 EFEYSDPDIHEDLYQLIKYSCGEMCTTEQLD--KVMKIWTTFLEPML 777
              Y D  I ED   LI +        ++ D  K+ +I   F+  ML
Sbjct: 781 TLPYEDSQILEDAAALIIHHVKRQTGIQKDDKYKIKQIIYHFIPDML 827



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 48/88 (54%), Positives = 63/88 (71%)

Query: 33  GGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKE 92
           G   G   Q+L   DAL+YL  VK  F ++ + Y+DFL++MK+FK+Q IDT GVI+RV +
Sbjct: 111 GSAQGQQFQRLKVEDALSYLDQVKLQFGNQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQ 170

Query: 93  LFKGHRDLILGFNTFLPKGYEITLPLED 120
           LFKGH DLI+GFNTFLP GY+I +   D
Sbjct: 171 LFKGHPDLIMGFNTFLPPGYKIEVQTND 198



 Score = 86.3 bits (212), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 50/141 (35%), Positives = 79/141 (56%), Gaps = 25/141 (17%)

Query: 117 PLEDEQP-------PP---KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKEN 166
           P++  QP       PP    +PVEF  AIN+VNKIK RFQG   +YK+FL+IL+ Y+KE 
Sbjct: 283 PMQLNQPLSGTPTGPPIQNNQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQ 342

Query: 167 KSI-------------TEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSI 213
           ++               EVY +V  LF++  DLL EF  FLPD++ +  ++   + +   
Sbjct: 343 RNAKEAGGNYTPALTEQEVYAQVARLFKNQEDLLSEFGQFLPDANNSVLLNKTTAEKAES 402

Query: 214 LRDRSSAMPTARQVHVDKKER 234
           +R+      TA+++ ++ K+R
Sbjct: 403 VRNDHGG--TAKKLQLNNKQR 421



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/63 (42%), Positives = 40/63 (63%), Gaps = 2/63 (3%)

Query: 355 FCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLARC 412
           F EKV+  LR  + Y  FLRCL ++ +E+++R+EL  LV   LG++P+L + F  FL   
Sbjct: 469 FFEKVRKALRSTEAYDNFLRCLVIFNQEVVSRAELVQLVLPFLGKFPELFNWFKNFLGYR 528

Query: 413 EKS 415
           E S
Sbjct: 529 EMS 531



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 40/67 (59%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           ++ E+A+++++++K +F     VY  FLDI+  ++ ++     V   V  LF+ HPDL+ 
Sbjct: 121 LKVEDALSYLDQVKLQFGNQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIM 180

Query: 189 EFTHFLP 195
            F  FLP
Sbjct: 181 GFNTFLP 187



 Score = 43.9 bits (102), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 17/107 (15%)

Query: 20  SSRGEPSGQTQVVGGGGGGGA----QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKD 75
           S R  P    Q + G   G      Q +  N A+ Y+  +K+ FQ + + Y  FLE++  
Sbjct: 278 SPRSPPMQLNQPLSGTPTGPPIQNNQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHT 337

Query: 76  FKAQRIDT--AG-----------VIARVKELFKGHRDLILGFNTFLP 109
           ++ ++ +   AG           V A+V  LFK   DL+  F  FLP
Sbjct: 338 YQKEQRNAKEAGGNYTPALTEQEVYAQVARLFKNQEDLLSEFGQFLP 384


>gi|397484882|ref|XP_003813594.1| PREDICTED: LOW QUALITY PROTEIN: paired amphipathic helix protein
           Sin3b [Pan paniscus]
          Length = 1159

 Score =  186 bits (473), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 136/408 (33%), Positives = 201/408 (49%), Gaps = 49/408 (12%)

Query: 351 QELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGF 408
           QE SF +KV+  L+    Y+ FLRC+ L+ +E+++ SEL  LV   LG++P+L   F  F
Sbjct: 303 QEFSFFDKVRRVLKSQEVYENFLRCIALFNQELVSGSELLQLVSPFLGKFPELFAQFKSF 362

Query: 409 LARCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRL 468
           L   E S    A  MS +S                         DG+  R+ +     R+
Sbjct: 363 LGVKELS---FAPPMSDRS------------------------GDGI-SREIDYASCKRI 394

Query: 469 DKSVAFVNKDV-GPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQR 527
             S   + K    PK S  ++  K L            + C   ++       IP  S  
Sbjct: 395 GSSYRALPKTYQQPKCSGRTAICKELDHWTLLQGSWTDDHCMSKFK---NTCWIPGYS-- 449

Query: 528 TELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRV 587
                 VLND WVS  S SED +F   +K  YEE L RCED+RFELD++LE+   T + +
Sbjct: 450 ----TGVLNDTWVSFPSWSEDSTFVSSKKTPYEEQLHRCEDERFELDVVLETNLATIRVL 505

Query: 588 EELLEKINNNTIKTDGPIRVEDHF----TALNLRCIERLYGDHGLDVMDVLRKNASLALP 643
           E + +K++    +     R++D        +  R I R+YGD   ++++ L+KN   A+P
Sbjct: 506 ESVQKKLSRMAPEDQEKFRLDDSLGGTSEVIQRRAIYRIYGDKAPEIIESLKKNPVTAVP 565

Query: 644 VILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEI 703
           V+L RLK K+EEW   +  FNK+W E Y K Y KSLDH++  FKQ D+K+L +K+L  EI
Sbjct: 566 VVLKRLKAKEEEWREAQQGFNKIWREQYEKAYLKSLDHQAVNFKQNDTKALRSKSLLNEI 625

Query: 704 KEISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLIKY 751
           + + ++ +++          +  S  PHL F Y D  I ED   LI Y
Sbjct: 626 ESVYDEHQEQHS-----EGRSAPSSEPHLIFVYEDRQILEDAAALISY 668



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 92/237 (38%), Positives = 119/237 (50%), Gaps = 47/237 (19%)

Query: 33  GGGGGGGAQKLTTN--DALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARV 90
           G  G  G +KL  +  DAL YL  VK  F      Y+ FLE+MK+FK+Q IDT GVI RV
Sbjct: 24  GRSGSAGHEKLPVHVEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRV 83

Query: 91  KELFKGHRDLILGFNTFLPKGYEITLP-----------------------LED--EQPP- 124
            +LF  H DLI+GFN FLP GY I +P                        ED  +Q P 
Sbjct: 84  SQLFHEHPDLIVGFNAFLPLGYRIDIPKNGKLNIQSPLTSQENSHNHGDGAEDFKQQVPY 143

Query: 125 ----PKKP-----VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKEN--------- 166
               P+ P     VEF  AI++VNKIKTRF     +Y+SFL+IL+ Y+KE          
Sbjct: 144 KEDKPQVPLESDSVEFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLNTRGRPFR 203

Query: 167 -KSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMP 222
             S  EV+ EV  LF+   DLL EF  FLP++  +      P   +S+ ++     P
Sbjct: 204 GMSEEEVFTEVANLFRGQEDLLSEFGQFLPEAKRSLFTGNGPCEMHSVQKNEHDKTP 260


>gi|114675954|ref|XP_512485.2| PREDICTED: paired amphipathic helix protein Sin3b [Pan troglodytes]
          Length = 1159

 Score =  186 bits (473), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 136/408 (33%), Positives = 201/408 (49%), Gaps = 49/408 (12%)

Query: 351 QELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGF 408
           QE SF +KV+  L+    Y+ FLRC+ L+ +E+++ SEL  LV   LG++P+L   F  F
Sbjct: 303 QEFSFFDKVRRVLKSQEVYENFLRCIALFNQELVSGSELLQLVSPFLGKFPELFAQFKSF 362

Query: 409 LARCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRL 468
           L   E S    A  MS +S                         DG+  R+ +     R+
Sbjct: 363 LGVKELS---FAPPMSDRS------------------------GDGI-SREIDYASCKRI 394

Query: 469 DKSVAFVNKDV-GPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQR 527
             S   + K    PK S  ++  K L            + C   ++       IP  S  
Sbjct: 395 GSSYRALPKTYQQPKCSGRTAICKELDHWTLLQGSWTDDHCMSKFK---NTCWIPGYS-- 449

Query: 528 TELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRV 587
                 VLND WVS  S SED +F   +K  YEE L RCED+RFELD++LE+   T + +
Sbjct: 450 ----TGVLNDTWVSFPSWSEDSTFVSSKKTPYEEQLHRCEDERFELDVVLETNLATIRVL 505

Query: 588 EELLEKINNNTIKTDGPIRVEDHF----TALNLRCIERLYGDHGLDVMDVLRKNASLALP 643
           E + +K++    +     R++D        +  R I R+YGD   ++++ L+KN   A+P
Sbjct: 506 ESVQKKLSRMAPEDQEKFRLDDSLGGTSEVIQRRAIYRIYGDKAPEIIESLKKNPVTAVP 565

Query: 644 VILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEI 703
           V+L RLK K+EEW   +  FNK+W E Y K Y KSLDH++  FKQ D+K+L +K+L  EI
Sbjct: 566 VVLKRLKAKEEEWREAQQGFNKIWREQYEKAYLKSLDHQAVNFKQNDTKALRSKSLLNEI 625

Query: 704 KEISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLIKY 751
           + + ++ +++          +  S  PHL F Y D  I ED   LI Y
Sbjct: 626 ESVYDEHQEQHS-----EGRSAPSSEPHLIFVYEDRQILEDAAALISY 668



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 92/237 (38%), Positives = 119/237 (50%), Gaps = 47/237 (19%)

Query: 33  GGGGGGGAQKLTTN--DALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARV 90
           G  G  G +KL  +  DAL YL  VK  F      Y+ FLE+MK+FK+Q IDT GVI RV
Sbjct: 24  GRSGSAGHEKLPVHVEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRV 83

Query: 91  KELFKGHRDLILGFNTFLPKGYEITLP-----------------------LED--EQPP- 124
            +LF  H DLI+GFN FLP GY I +P                        ED  +Q P 
Sbjct: 84  SQLFHEHPDLIVGFNAFLPLGYRIDIPKNGKLNIQSPLTSQENSHNHGDGAEDFKQQVPY 143

Query: 125 ----PKKP-----VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKEN--------- 166
               P+ P     VEF  AI++VNKIKTRF     +Y+SFL+IL+ Y+KE          
Sbjct: 144 KEDKPQVPLESDSVEFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLNTRGRPFR 203

Query: 167 -KSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMP 222
             S  EV+ EV  LF+   DLL EF  FLP++  +      P   +S+ ++     P
Sbjct: 204 GMSEEEVFTEVANLFRGQEDLLSEFGQFLPEAKRSLFTGNGPCEMHSVQKNEHDKTP 260


>gi|444726669|gb|ELW67193.1| NACHT and WD repeat domain-containing protein 1 [Tupaia chinensis]
          Length = 2588

 Score =  186 bits (473), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 105/258 (40%), Positives = 152/258 (58%), Gaps = 11/258 (4%)

Query: 498  QELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKN 557
            +E+D ++C+R   SYR LPK Y  P  S RT +  EVLND WVS  S SED +F   +K 
Sbjct: 1921 REIDYASCKRIGSSYRALPKTY--PRCSGRTAICKEVLNDTWVSFPSWSEDSTFVSSKKT 1978

Query: 558  QYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFT----A 613
             YEE L RCED+RFELD++LE+   T + +E + +K++    +     R++D        
Sbjct: 1979 PYEEQLHRCEDERFELDVVLETNLATIRVLESVQKKLSRMAPEDQEKFRLDDSLGGTSEV 2038

Query: 614  LNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSK 673
            +  R I R+YGD   ++++ L+KN   A+PV+L RLK K+EEW   +  FNK+W E Y K
Sbjct: 2039 IQRRAIHRIYGDKAPEIIESLKKNPVTAVPVVLKRLKAKEEEWREAQQGFNKIWREQYEK 2098

Query: 674  NYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLE 733
             Y KSLDH++  FKQ D+K+L +K+L  EI+ + ++ +++          +  S  PHL 
Sbjct: 2099 AYLKSLDHQAVNFKQNDTKALRSKSLLNEIESVYDEHQEQHS-----EGRSAPSSEPHLI 2153

Query: 734  FEYSDPDIHEDLYQLIKY 751
            F Y D  I ED   LI Y
Sbjct: 2154 FAYEDRQILEDAAALITY 2171



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 82/198 (41%), Positives = 103/198 (52%), Gaps = 45/198 (22%)

Query: 45   TNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGF 104
              DAL YL  VK  F      Y+ FLE+MK+FK+Q IDT GVI RV +LF  H DLI+GF
Sbjct: 1575 VEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRVSQLFHEHPDLIVGF 1634

Query: 105  NTFLPKGYEITL----------PLEDEQPP--------------------PKKP-----V 129
            N FLP GY I +          PL  ++ P                    P+ P     V
Sbjct: 1635 NAFLPLGYRIDIPKNGKLNIQSPLASQENPHGHGDCAEDFKQQMPYKEDKPQVPLESDSV 1694

Query: 130  EFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKE----------NKSITEVYQEVEAL 179
            EF  AI++VNKIKTRF     +Y+SFL+IL+ Y+KE            S  EV+ EV  L
Sbjct: 1695 EFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLNTKGRPFRGMSEEEVFTEVANL 1754

Query: 180  FQDHPDLLEEFTHFLPDS 197
            F+   DLL EF  FLP++
Sbjct: 1755 FRGQEDLLSEFGQFLPEA 1772



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 39/62 (62%), Gaps = 2/62 (3%)

Query: 351  QELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGF 408
            QE SF +KV+  LR    Y+ FLRC+ L+ +E+++ SEL  LV   LG++P+L   F  F
Sbjct: 1840 QEFSFFDKVRRVLRSQEVYENFLRCIALFNQELVSGSELLQLVSPFLGKFPELFAQFKSF 1899

Query: 409  LA 410
            L 
Sbjct: 1900 LG 1901


>gi|209969724|ref|NP_001129640.1| paired amphipathic helix protein Sin3a-like [Xenopus laevis]
 gi|51703468|gb|AAH81027.1| Unknown (protein for MGC:81671) [Xenopus laevis]
          Length = 1059

 Score =  186 bits (472), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 105/288 (36%), Positives = 170/288 (59%), Gaps = 17/288 (5%)

Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQ 558
           E+D ++C+R   SYR LPK++  P  + RT L  EVLND WVS  S SED +F   +K Q
Sbjct: 499 EIDYASCKRLGSSYRALPKSFQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVSSKKTQ 558

Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TAL 614
           YEE ++RCED+RFELD++LE+   T + +E + +K++  + +     R+++        +
Sbjct: 559 YEEHIYRCEDERFELDVVLETNLATIRVLETVQKKLSRLSAEDQAKFRLDNTLGGTSEVI 618

Query: 615 NLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKN 674
           + + ++R+Y D   D++D L+KN ++A+P++L RLK K+EEW   +  FNK+W E   K 
Sbjct: 619 HRKALQRIYADKAADIIDGLKKNPAVAVPIVLKRLKMKEEEWREAQRGFNKIWREQNEKY 678

Query: 675 YHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRK---EDDVLLAIAAGNRRSIVPH 731
           Y KSLDH+   +KQ D+K L +K+L  EI+ I +++++   ED+    I++G      PH
Sbjct: 679 YLKSLDHQGINYKQIDTKVLRSKSLLNEIESIYDERQEQVSEDNS--GISSG------PH 730

Query: 732 LEFEYSDPDIHEDLYQLIKYSCGEMCTTEQLD--KVMKIWTTFLEPML 777
           L   Y D  I +D   LI +        ++ D  K+ +I   F+  +L
Sbjct: 731 LTLTYDDKQILDDAASLIIHHVKRQTGIQKEDKYKIKQIVYHFIPDLL 778



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 46/84 (54%), Positives = 62/84 (73%)

Query: 37  GGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKG 96
           G   Q+L   DAL+YL  VK  F ++ + Y+DFL++MK+FK+Q IDT GVI+RV +LFKG
Sbjct: 114 GQQFQRLKVEDALSYLDQVKLQFGNQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKG 173

Query: 97  HRDLILGFNTFLPKGYEITLPLED 120
           H +LI+GFNTFLP GY+I +   D
Sbjct: 174 HPELIMGFNTFLPPGYKIEVQTND 197



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/57 (52%), Positives = 41/57 (71%), Gaps = 3/57 (5%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDH 183
           +PVEF  AIN+VNKIK RFQG   +YKSFL+IL+ Y+  +K+  E   +VE++  DH
Sbjct: 304 QPVEFNHAINYVNKIKNRFQGQPDIYKSFLEILHTYQLLSKTTAE---KVESVRNDH 357



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 2/66 (3%)

Query: 352 ELSFCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFL 409
           E  F +KV+  LR  + Y  FLRCL ++ +E+I+RSEL  LV   L ++P+L   F  FL
Sbjct: 417 ESQFFDKVRKALRSAEAYDNFLRCLVIFNQEVISRSELVQLVSPFLAKFPELFTWFKNFL 476

Query: 410 ARCEKS 415
              E S
Sbjct: 477 GYKESS 482



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 40/67 (59%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           ++ E+A+++++++K +F     VY  FLDI+  ++ ++     V   V  LF+ HP+L+ 
Sbjct: 120 LKVEDALSYLDQVKLQFGNQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPELIM 179

Query: 189 EFTHFLP 195
            F  FLP
Sbjct: 180 GFNTFLP 186


>gi|298712265|emb|CBJ26716.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 1345

 Score =  186 bits (472), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 96/215 (44%), Positives = 136/215 (63%), Gaps = 7/215 (3%)

Query: 496 PIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSE----DYSF 551
           P+ ELDL+  E+  PSYR LPKN+ + S S+RT L   VLND WVSV  GSE    D +F
Sbjct: 325 PLNELDLTLSEKGGPSYRHLPKNFPLLSCSERTSLEQSVLNDLWVSVPVGSEGGGSDVAF 384

Query: 552 KHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKIN--NNTIKTDGPIRVED 609
           KHMRKNQ+E+ LF+CED+RFELDM++E+ +     +E + E+I   + T       +++ 
Sbjct: 385 KHMRKNQHEDLLFKCEDERFELDMVIEAGSSAISLLEPMEEEIKCIDKTAGARYQFKLDR 444

Query: 610 H-FTALNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWA 668
              + + L  I R+YGDHG +++++LRKN    +PVIL RL+QK  EW   R   NK+W+
Sbjct: 445 RVLSPVQLAAITRIYGDHGAEILELLRKNPCKTVPVILARLRQKDVEWRVSRERLNKLWS 504

Query: 669 EIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEI 703
            +    Y+KSLD RS   K +D K+  A+ L A+I
Sbjct: 505 NVQRSTYYKSLDRRSIDVKNEDKKAHSARVLVADI 539



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 45/76 (59%), Positives = 55/76 (72%)

Query: 41  QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDL 100
           ++L   DAL YL  VK  F DK E Y++FL++MK+FKA  IDT GVI RV  LF+G+  L
Sbjct: 2   RELRVEDALLYLDQVKIEFGDKPEIYNEFLDIMKNFKAMAIDTPGVIRRVSSLFRGYNKL 61

Query: 101 ILGFNTFLPKGYEITL 116
           ILGFNTFLP GY+I L
Sbjct: 62  ILGFNTFLPDGYKIEL 77



 Score = 48.1 bits (113), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 19/41 (46%), Positives = 28/41 (68%)

Query: 128 PVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKS 168
           P EF+ AI +V  IK RF  +   YK+FL+IL+ Y+KE ++
Sbjct: 156 PAEFDHAITYVTTIKKRFSHEPQTYKAFLEILHTYQKEQRA 196



 Score = 43.5 bits (101), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 19/68 (27%), Positives = 36/68 (52%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           +  E+A+ +++++K  F     +Y  FLDI+  ++        V + V +LF+ +  L+ 
Sbjct: 4   LRVEDALLYLDQVKIEFGDKPEIYNEFLDIMKNFKAMAIDTPGVIRRVSSLFRGYNKLIL 63

Query: 189 EFTHFLPD 196
            F  FLPD
Sbjct: 64  GFNTFLPD 71


>gi|148226481|ref|NP_001081937.1| SIN3 transcription regulator homolog A [Xenopus laevis]
 gi|4960210|gb|AAD34644.1|AF154112_1 transcription co-repressor Sin3 [Xenopus laevis]
          Length = 1275

 Score =  186 bits (471), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 105/288 (36%), Positives = 169/288 (58%), Gaps = 17/288 (5%)

Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQ 558
           E+D ++C+R   SYR LPK +  P  + RT L  EVLND WVS  S SED +F   +K Q
Sbjct: 547 EIDYASCKRLGSSYRALPKVFQQPKCTGRTPLSKEVLNDTWVSFPSWSEDSTFVSSKKTQ 606

Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TAL 614
           YEE ++RCED+RFELD++LE+   T + +E + +K++  + +     R+++        +
Sbjct: 607 YEEHIYRCEDERFELDVVLETNLATIRVLETVQKKLSRLSAEDQAKFRLDNTLGGTSEVI 666

Query: 615 NLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKN 674
           + + ++R+Y D   D++D L+KN ++A+P++L RLK K+EEW   +  FNK+W E   K 
Sbjct: 667 HRKALQRIYADKAADIIDGLKKNPAVAVPIVLKRLKMKEEEWREAQRGFNKIWREQNEKY 726

Query: 675 YHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRK---EDDVLLAIAAGNRRSIVPH 731
           Y KSLDH+   +KQ D+K L +K+L  EI+ I +++++   ED+    I++G      PH
Sbjct: 727 YLKSLDHQGINYKQIDTKVLRSKSLLNEIESIYDERQEQVSEDNS--GISSG------PH 778

Query: 732 LEFEYSDPDIHEDLYQLIKYSCGEMCTTEQLD--KVMKIWTTFLEPML 777
           L   Y D  I +D   LI +        ++ D  K+ +I   F+  +L
Sbjct: 779 LTLTYDDKQILDDAASLIIHHVKRQTGIQKEDKYKIKQIVYHFIPDLL 826



 Score = 97.1 bits (240), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 47/107 (43%), Positives = 66/107 (61%), Gaps = 5/107 (4%)

Query: 19  ISSRGEPSGQTQV-----VGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVM 73
           + + G P+ Q+            G   Q+L   DAL+YL  VK  F  + + Y+DFL++M
Sbjct: 89  VPTHGGPAVQSHAHSTPPAAPAQGQQFQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIM 148

Query: 74  KDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLED 120
           K+FK+Q IDT GVI+RV +LFKGH +LI+GF  FLP GY+I +   D
Sbjct: 149 KEFKSQSIDTPGVISRVSQLFKGHPELIMGFGAFLPPGYKIEVQTND 195



 Score = 82.8 bits (203), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 41/90 (45%), Positives = 56/90 (62%), Gaps = 13/90 (14%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI-------------TEVY 173
           +PVEF  AIN+VNKIK RFQG   +YKSFL+IL+ Y+KE ++               EVY
Sbjct: 301 QPVEFNHAINYVNKIKNRFQGQPDIYKSFLEILHTYQKEQRNAKEAGGNYTPALTEQEVY 360

Query: 174 QEVEALFQDHPDLLEEFTHFLPDSSGAASI 203
            +V  LF++  DLL EF  FLPD++ +  +
Sbjct: 361 AQVARLFKNQEDLLSEFGQFLPDANSSVLL 390



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 2/66 (3%)

Query: 352 ELSFCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFL 409
           E  F +KV+  LR  + Y  FLRCL ++ +E+I+RSEL  LV   L ++P+L   F  FL
Sbjct: 465 ESQFFDKVRKALRSAEAYDNFLRCLVIFNQEVISRSELVQLVSPFLAKFPELFTWFKNFL 524

Query: 410 ARCEKS 415
              E S
Sbjct: 525 GYKESS 530



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 8/80 (10%)

Query: 124 PPKKP--------VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQE 175
           PP  P        ++ E+A+++++++K +F     VY  FLDI+  ++ ++     V   
Sbjct: 105 PPAAPAQGQQFQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISR 164

Query: 176 VEALFQDHPDLLEEFTHFLP 195
           V  LF+ HP+L+  F  FLP
Sbjct: 165 VSQLFKGHPELIMGFGAFLP 184



 Score = 42.0 bits (97), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 13/82 (15%)

Query: 41  QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDT--AG-----------VI 87
           Q +  N A+ Y+  +K+ FQ + + Y  FLE++  ++ ++ +   AG           V 
Sbjct: 301 QPVEFNHAINYVNKIKNRFQGQPDIYKSFLEILHTYQKEQRNAKEAGGNYTPALTEQEVY 360

Query: 88  ARVKELFKGHRDLILGFNTFLP 109
           A+V  LFK   DL+  F  FLP
Sbjct: 361 AQVARLFKNQEDLLSEFGQFLP 382


>gi|24653096|ref|NP_725187.1| Sin3A, isoform B [Drosophila melanogaster]
 gi|24653098|ref|NP_725188.1| Sin3A, isoform C [Drosophila melanogaster]
 gi|320543836|ref|NP_001188912.1| Sin3A, isoform E [Drosophila melanogaster]
 gi|21627309|gb|AAF58487.2| Sin3A, isoform B [Drosophila melanogaster]
 gi|21627310|gb|AAM68624.1| Sin3A, isoform C [Drosophila melanogaster]
 gi|54650836|gb|AAV36997.1| LD13852p [Drosophila melanogaster]
 gi|318068575|gb|ADV37159.1| Sin3A, isoform E [Drosophila melanogaster]
          Length = 2062

 Score =  186 bits (471), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 125/404 (30%), Positives = 196/404 (48%), Gaps = 59/404 (14%)

Query: 354  SFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLAR 411
            +F +KV+  LR    Y  FLRCL L+ +EI++++EL  LV                FL +
Sbjct: 923  AFFDKVRKALRSPEVYDNFLRCLTLFNQEIVSKTELLGLVSP--------------FLMK 968

Query: 412  CEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRLDKS 471
                     D +   S    G +   + +    R      +      DR           
Sbjct: 969  FPDLLRWFTDFLGPPSGQPAGGLIDGMPLAATQRQGGGSSNS---SHDR----------- 1014

Query: 472  VAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELG 531
                            +  +  A+ +Q++DLS+C+R   SY  LP++ +    S RT L 
Sbjct: 1015 ---------------GTSHQSAAEYVQDVDLSSCKRLGASYCALPQSTVPKKCSGRTALC 1059

Query: 532  AEVLNDHWVSV-TSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEEL 590
             EVLND WVS  T  SED +F   RK Q+EE+++R ED+RFELD+++E  + T + +E L
Sbjct: 1060 REVLNDKWVSFPTWASEDSTFVTSRKTQFEETIYRTEDERFELDLVIEVNSATIRVLENL 1119

Query: 591  LEKINNNTIKTDGPIRVEDHFTA----LNLRCIERLYGDHGLDVMDVLRKNASLALPVIL 646
             +K++  + +      ++DH       ++ R I R+YGD   +++  ++KN  +A+P++L
Sbjct: 1120 QKKMSRMSTEELSKFHLDDHLGGTSQTIHQRAIHRIYGDKSGEIITGMKKNPFVAVPIVL 1179

Query: 647  TRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEI 706
             RLK K+EEW   +  FNK W E   K Y KSLDH++  FK  D K+L +K+L  EI+ +
Sbjct: 1180 KRLKVKEEEWREAQKTFNKQWREQNEKYYLKSLDHQAINFKPNDMKALRSKSLFNEIETL 1239

Query: 707  -SEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLI 749
              E+  +EDD +            PHL   Y D  I +D   L+
Sbjct: 1240 YDERHDQEDDAMEPFG--------PHLVLPYKDKTILDDAANLL 1275



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 49/114 (42%), Positives = 65/114 (57%), Gaps = 9/114 (7%)

Query: 25  PSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTA 84
           P G T    G  G    +L   DAL+YL  VK  + D+ + Y++FL++MK+FK+  IDT 
Sbjct: 252 PVGGTTPPQGQSGNATPRLKVEDALSYLDQVKYQYADQPQIYNNFLDIMKEFKSHCIDTP 311

Query: 85  GVIARVKELFKGHRDLILGFNTFLPKGYEI---------TLPLEDEQPPPKKPV 129
           GVI RV  LFKGH +LI GFN FLP GY+I         ++P+     PP  P 
Sbjct: 312 GVIERVSTLFKGHTELIYGFNMFLPPGYKIEIHSDALGCSVPVVSMPSPPGAPT 365



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 40/93 (43%), Positives = 51/93 (54%), Gaps = 13/93 (13%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI-------------TEVY 173
           +PVEF  AI +VNKIK RFQ     YK FL+IL+ Y++E K +              EVY
Sbjct: 565 QPVEFNHAITYVNKIKNRFQNQPAKYKKFLEILHDYQREQKVMKEGSLNQGKMLTEQEVY 624

Query: 174 QEVEALFQDHPDLLEEFTHFLPDSSGAASIHYV 206
            +V  LF    DLL EF  FLPD++   S  Y+
Sbjct: 625 TQVAKLFGQDEDLLREFGQFLPDATNHQSGQYM 657



 Score = 48.1 bits (113), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 21/87 (24%), Positives = 46/87 (52%), Gaps = 6/87 (6%)

Query: 115 TLPLEDEQPPPKKP------VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKS 168
           ++P+    PP  +       ++ E+A+++++++K ++     +Y +FLDI+  ++     
Sbjct: 250 SIPVGGTTPPQGQSGNATPRLKVEDALSYLDQVKYQYADQPQIYNNFLDIMKEFKSHCID 309

Query: 169 ITEVYQEVEALFQDHPDLLEEFTHFLP 195
              V + V  LF+ H +L+  F  FLP
Sbjct: 310 TPGVIERVSTLFKGHTELIYGFNMFLP 336



 Score = 43.9 bits (102), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 13/92 (14%)

Query: 31  VVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDF-KAQRIDTAG---- 85
           ++ G  G   Q +  N A+ Y+  +K+ FQ++  KY  FLE++ D+ + Q++   G    
Sbjct: 555 ILLGETGQQNQPVEFNHAITYVNKIKNRFQNQPAKYKKFLEILHDYQREQKVMKEGSLNQ 614

Query: 86  --------VIARVKELFKGHRDLILGFNTFLP 109
                   V  +V +LF    DL+  F  FLP
Sbjct: 615 GKMLTEQEVYTQVAKLFGQDEDLLREFGQFLP 646



 Score = 43.1 bits (100), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 42/91 (46%), Gaps = 15/91 (16%)

Query: 123 PPPKKP------VEFEEAIN--------FVNKIKTRFQGDDHVYKSFLDILNMYRKENKS 168
           PP K+P      V F EA +        F +K++   +  + VY +FL  L ++ +E  S
Sbjct: 896 PPAKRPKPYCRDVSFSEASSKCTISDAAFFDKVRKALRSPE-VYDNFLRCLTLFNQEIVS 954

Query: 169 ITEVYQEVEALFQDHPDLLEEFTHFLPDSSG 199
            TE+   V       PDLL  FT FL   SG
Sbjct: 955 KTELLGLVSPFLMKFPDLLRWFTDFLGPPSG 985


>gi|338718676|ref|XP_001915048.2| PREDICTED: LOW QUALITY PROTEIN: paired amphipathic helix protein
           Sin3b [Equus caballus]
          Length = 1119

 Score =  186 bits (471), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 154/507 (30%), Positives = 239/507 (47%), Gaps = 73/507 (14%)

Query: 351 QELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGF 408
           QE SF +KV+  L+    Y+ FLRC+ L+ +E+++ SEL  LV   LG++P+L   F  F
Sbjct: 268 QEFSFFDKVRRVLKSQEVYENFLRCIALFNQELVSGSELLQLVSPFLGKFPELFAQFKSF 327

Query: 409 LARCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRL 468
           L   E S    A  MS +S                         DG+  R+ +     R+
Sbjct: 328 LGVKELS---FAPPMSDRS------------------------GDGI-SREIDYASCKRI 359

Query: 469 DKSVAFVNKDV-GPKMSMYSSKDKYL-AKPIQELDLSNCERCTPSYRLLPKNYLIPSASQ 526
             S   + K    PK S  ++  K L  + + +   ++C  C   ++       IP    
Sbjct: 360 GSSYRALPKTYQQPKCSGRTAICKELDEETLLQGXWTDC-YCISRFK---NACXIPGCI- 414

Query: 527 RTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKR 586
                  VLND WVS  S SED +F   +K  YEE L RCED+RFELD++LE+   T + 
Sbjct: 415 -----PGVLNDTWVSFPSWSEDSTFVSSKKTPYEEQLHRCEDERFELDVVLETNLATIRV 469

Query: 587 VEELLEKINNNTIKTDGPIRVEDHF----TALNLRCIERLYGDHGLDVMDVLRKNASLAL 642
           +E + +K++    +     R++D        +  R I R+YGD   ++++ L+KN   A+
Sbjct: 470 LESVQKKLSRMAPEDQEKFRLDDCLGGTSEVIQRRAIHRIYGDKAPEIIESLKKNPVTAV 529

Query: 643 PVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAE 702
           PV+L RLK K+EEW   +  FNK+W E Y K Y KSLDH++  FKQ D+K+L +K+L  E
Sbjct: 530 PVVLKRLKAKEEEWREAQQGFNKIWREQYEKAYLKSLDHQAVNFKQNDTKALRSKSLLNE 589

Query: 703 IKEISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLIKYSCGEMCTTEQL 762
           I+ + ++ +++                PHL F Y D  I ED   LI Y        ++ 
Sbjct: 590 IESVYDEHQEQHSEGRGAPCSE-----PHLIFVYEDRQILEDAAALISYYVKRQPAIQKE 644

Query: 763 DK--VMKIWTTFLEPMLGVPSRPQGA-EDTEDVVKAKSHTVKSRAASVGDSDGSPDGDAA 819
           D+  + ++   F+  +        GA ED+ D                 +  GSP G +A
Sbjct: 645 DQGTIHQLVHQFVPSLFFSQQLELGASEDSAD-----------------EGRGSPLGQSA 687

Query: 820 AMTSKHSNPSRNGDESIPPEQSSSSRA 846
               +   P+  G +S PPE+  ++ A
Sbjct: 688 D-PGERKKPA-PGPQSSPPEEKGATGA 712



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 83/210 (39%), Positives = 105/210 (50%), Gaps = 45/210 (21%)

Query: 49  LAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFL 108
           L YL  VK  F      Y+ FLE+MK+FK+Q IDT GVI RV +LF  H DLI+GFN FL
Sbjct: 7   LTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRVSQLFHEHPDLIVGFNAFL 66

Query: 109 PKGYEITLP----LEDEQP--------------------------PPKKP-----VEFEE 133
           P GY I +P    L  + P                           P+ P     VEF  
Sbjct: 67  PLGYRIDIPKNGKLNIQSPLSSQENAHNHSDCAESFKQQMLYKEDKPQAPLESDSVEFNN 126

Query: 134 AINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSIT----------EVYQEVEALFQDH 183
           AI++VNKIKTRF     +Y+SFL+IL+ Y+KE  S            EV+ EV  LF+  
Sbjct: 127 AISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLSTKGRPFRGMSEEEVFTEVANLFRGQ 186

Query: 184 PDLLEEFTHFLPDSSGAASIHYVPSGRNSI 213
            DLL EF  FLP++  +      P   NS+
Sbjct: 187 EDLLSEFGQFLPEAKRSLFTGNGPCEVNSV 216



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/218 (22%), Positives = 84/218 (38%), Gaps = 61/218 (27%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAG----------VIARVKELFK 95
           N+A++Y+  +K  F D  E Y  FLE++  ++ +++ T G          V   V  LF+
Sbjct: 125 NNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLSTKGRPFRGMSEEEVFTEVANLFR 184

Query: 96  GHRDLILGFNTFLPKG--------------------YEITLP----------LEDEQPPP 125
           G  DL+  F  FLP+                     +E  L           L     P 
Sbjct: 185 GQEDLLSEFGQFLPEAKRSLFTGNGPCEVNSVQKSEHEKNLEHSKKRSRPSLLRPVSAPA 244

Query: 126 KKPVEFE----------------EAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI 169
           KK ++                  +  +F +K++ R      VY++FL  + ++ +E  S 
Sbjct: 245 KKKMKLRGTKDLSIAAVGKYGTLQEFSFFDKVR-RVLKSQEVYENFLRCIALFNQELVSG 303

Query: 170 TEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVP 207
           +E+ Q V       P+L  +F  FL    G   + + P
Sbjct: 304 SELLQLVSPFLGKFPELFAQFKSFL----GVKELSFAP 337



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 20/67 (29%), Positives = 38/67 (56%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           +++   + +++++K RF  D   Y  FL+I+  ++ ++     V + V  LF +HPDL+ 
Sbjct: 1   MQWRTPLTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRVSQLFHEHPDLIV 60

Query: 189 EFTHFLP 195
            F  FLP
Sbjct: 61  GFNAFLP 67


>gi|260806042|ref|XP_002597894.1| hypothetical protein BRAFLDRAFT_97881 [Branchiostoma floridae]
 gi|229283163|gb|EEN53906.1| hypothetical protein BRAFLDRAFT_97881 [Branchiostoma floridae]
          Length = 1209

 Score =  185 bits (470), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 106/279 (37%), Positives = 163/279 (58%), Gaps = 12/279 (4%)

Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQ 558
           E+D S+C+R   SYR LPK++  P  S RT L  +VLND WVS  S SED +F   RK Q
Sbjct: 501 EIDYSSCKRLGSSYRALPKSFTQPKCSGRTVLCKQVLNDTWVSFPSWSEDSTFVTSRKTQ 560

Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLE-KINNNTIKTDGPIRVEDHFT----A 613
           YEE ++RCED+R+ELD++LE+ N++T RV E ++ K++  + +     R++         
Sbjct: 561 YEEHIYRCEDERYELDVVLET-NLSTIRVLEAVQKKLSRMSSEEAAKFRLDSCLGGTSEV 619

Query: 614 LNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSK 673
           ++ + I+R+YGD   D+++ LRKN ++A+P++L RLK K+EEW   +  F+K+W E   K
Sbjct: 620 IHRKAIQRIYGDKAPDIIEGLRKNPAVAVPLVLRRLKAKEEEWREAKRGFDKIWREQNEK 679

Query: 674 NYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLE 733
            Y KSLDH+   FKQ DSK+L +K+   EI+ I +++++      A A G       H+ 
Sbjct: 680 YYLKSLDHQGINFKQTDSKALRSKSFLNEIETIFDERQE------AAAEGAGDVSGAHIV 733

Query: 734 FEYSDPDIHEDLYQLIKYSCGEMCTTEQLDKVMKIWTTF 772
             Y D  I +D   L+ Y      +  + DK    W  +
Sbjct: 734 LTYQDTGIMDDAAGLVVYHMKRQTSIHKEDKQKIKWLLY 772



 Score =  159 bits (403), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 92/240 (38%), Positives = 122/240 (50%), Gaps = 79/240 (32%)

Query: 42  KLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLI 101
           +L   DAL+YL  VK  F ++ + Y+DFL++MK+FK+Q IDT GVI RV  LFKGH DLI
Sbjct: 108 RLKVEDALSYLDQVKLQFGNQPQVYNDFLDIMKEFKSQSIDTPGVINRVSNLFKGHPDLI 167

Query: 102 LGFNTFLPKGYEITL-----------------------------------PLEDEQPPPK 126
           +GFNTFLP GY+I +                                   P++  QPP +
Sbjct: 168 VGFNTFLPPGYKIEVQTSDGQVSVSSPGGNTTLTHAGIPRPQTPVMTQQQPVQHSQPPSQ 227

Query: 127 --------------------------------KPVEFEEAINFVNKIKTRFQGDDHVYKS 154
                                           +PVEF  AIN+VNKIK RFQG   +YK+
Sbjct: 228 SQASFPPVQQTSAGPTMVQAPQLSSSPNTQGSQPVEFNHAINYVNKIKNRFQGQPDIYKA 287

Query: 155 FLDILNMYRKENKSI------------TEVYQEVEALFQDHPDLLEEFTHFLPDSSGAAS 202
           FL+IL+ Y+KE ++I             EVY +V  LFQ+  DLL EF  FLPD++ AA+
Sbjct: 288 FLEILHTYQKEQRNIKEGYATAPTLTEAEVYAQVAKLFQNQEDLLAEFGQFLPDANAAAA 347



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 42/64 (65%), Gaps = 2/64 (3%)

Query: 352 ELSFCEKVKDKL--RDDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFL 409
           E +F +KV+  L  +D Y+ FLRCL L+ +E+I+R+EL  LV   LG++P+L + F  FL
Sbjct: 417 EFAFFDKVRKALHSQDVYENFLRCLVLFNQEVISRAELVQLVTPFLGKFPELFNWFKQFL 476

Query: 410 ARCE 413
              E
Sbjct: 477 GYQE 480



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 50/220 (22%), Positives = 79/220 (35%), Gaps = 65/220 (29%)

Query: 39  GAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFK------------AQRIDTAGV 86
           G+Q +  N A+ Y+  +K+ FQ + + Y  FLE++  ++            A  +  A V
Sbjct: 258 GSQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNIKEGYATAPTLTEAEV 317

Query: 87  IARVKELFKGHRDLILGFNTFLPKGYEITLPLEDEQP----------------------- 123
            A+V +LF+   DL+  F  FLP          + Q                        
Sbjct: 318 YAQVAKLFQNQEDLLAEFGQFLPDANAAAAQFREVQQREAQVRNDHGSTVKKQSSFSKAQ 377

Query: 124 ---------------PPKKP------VEFEEA--------INFVNKIKTRFQGDDHVYKS 154
                          PPKK       +   EA          F +K++      D VY++
Sbjct: 378 RGNHVRRPGGPMGSVPPKKMKTGLKDISLAEAGKHGTLTEFAFFDKVRKALHSQD-VYEN 436

Query: 155 FLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFL 194
           FL  L ++ +E  S  E+ Q V       P+L   F  FL
Sbjct: 437 FLRCLVLFNQEVISRAELVQLVTPFLGKFPELFNWFKQFL 476


>gi|292616206|ref|XP_002662923.1| PREDICTED: paired amphipathic helix protein Sin3a [Danio rerio]
          Length = 1262

 Score =  185 bits (470), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 109/289 (37%), Positives = 169/289 (58%), Gaps = 19/289 (6%)

Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQ 558
           E+D ++C+R   SYR LPK++  P  + RT L  EVLND WVS  S SED +F   +K Q
Sbjct: 541 EIDYASCKRLGSSYRALPKSFQQPRCTGRTPLCKEVLNDTWVSFPSWSEDSTFVSSKKTQ 600

Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEK-INNNTIKTDGPIRVEDHF----TA 613
           YEE ++RCED+RFELD++LE+ N+ T RV E ++K I+  + +     R+++        
Sbjct: 601 YEEHIYRCEDERFELDVVLET-NLATIRVLEAVQKRISRMSAEEQAKFRLDNTIGGSSEV 659

Query: 614 LNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSK 673
           ++ + I+R+YGD   D++D L+ N ++++P++L RLK K+EEW   +  FNK+W E   K
Sbjct: 660 IHRKAIQRIYGDKAPDIIDGLKTNPAVSVPIVLKRLKIKEEEWREAQRGFNKIWREQNEK 719

Query: 674 NYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRK---EDDVLLAIAAGNRRSIVP 730
            Y KSLDH+   FKQ D+K   +K L  EI+ + +++++   ED+   A+ +G      P
Sbjct: 720 YYLKSLDHQGINFKQNDTKVFRSKTLLNEIETLYDERQEQASEDNA--AVPSG------P 771

Query: 731 HLEFEYSDPDIHEDLYQLIKYSCGEMCTTEQLD--KVMKIWTTFLEPML 777
           H+   Y D  I ED   LI +         + D  K+ +I   F+  ML
Sbjct: 772 HMTLMYEDSQILEDAAALIIHHVKRQSGIHKDDKYKIKQIIYHFIPDML 820



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 91/309 (29%), Positives = 134/309 (43%), Gaps = 96/309 (31%)

Query: 117 PLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENK--------- 167
           PL++ QP     VEF  AIN+VNKIK RFQG   VYKSFL+IL+ Y+KE +         
Sbjct: 292 PLQNNQP-----VEFNHAINYVNKIKNRFQGQPEVYKSFLEILHTYQKEQRNAKEAGGNY 346

Query: 168 --SITE--VYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPT 223
             ++TE  VY +V  LF++  DLL EF  FLPD++            +S+L  +++A   
Sbjct: 347 TPTLTEQQVYAQVAQLFKNQEDLLSEFGQFLPDAN------------SSVLLSKTTA--- 391

Query: 224 ARQVHVDKKERAMASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERRDDHRRERE 283
                    E+A A   D   +V RP  ++ +   ++    RR                 
Sbjct: 392 ---------EKAEAVRIDHGGTVKRPQLNNKQRFNQNGCQIRRHSGPPTTP--------- 433

Query: 284 RDDRDFENDVNRDFSMQRFPHKRKSARKIEDSTAEPLHQGGEGDENFGMHPVSSSYDDKN 343
                              P K+K    ++D +     + G G E+              
Sbjct: 434 -------------------PVKKKQKFAVKDPSVAEASKLGIGAESL------------- 461

Query: 344 AMKSMFSQELSFCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDL 401
                      F EKV+  LR  + Y  FLRCL ++ +E+I+R+EL  LV   LG++P+L
Sbjct: 462 -----------FFEKVRKALRSSEAYDNFLRCLVIFNQEVISRAELVQLVLPFLGKFPEL 510

Query: 402 MDGFNGFLA 410
              F  FL 
Sbjct: 511 FTWFKNFLG 519



 Score =  102 bits (255), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 47/85 (55%), Positives = 62/85 (72%)

Query: 36  GGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFK 95
           G    Q+L   DAL+YL  VK  F ++ + Y+DFL++MK+FK+Q IDT GVI+RV +LFK
Sbjct: 108 GQQQFQRLKVEDALSYLDQVKLQFGNQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFK 167

Query: 96  GHRDLILGFNTFLPKGYEITLPLED 120
           GH DLI+GFNTFLP GY+I +   D
Sbjct: 168 GHPDLIMGFNTFLPPGYKIEVQTND 192



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 40/67 (59%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           ++ E+A+++++++K +F     VY  FLDI+  ++ ++     V   V  LF+ HPDL+ 
Sbjct: 115 LKVEDALSYLDQVKLQFGNQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIM 174

Query: 189 EFTHFLP 195
            F  FLP
Sbjct: 175 GFNTFLP 181



 Score = 47.0 bits (110), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 49/112 (43%), Gaps = 19/112 (16%)

Query: 17  PMISSRGEPSGQTQVVGGGGGGGA------QKLTTNDALAYLKAVKDIFQDKREKYDDFL 70
           P  +S   PS Q+         G+      Q +  N A+ Y+  +K+ FQ + E Y  FL
Sbjct: 267 PSYASPRSPSVQSHTPISSSTAGSTPLQNNQPVEFNHAINYVNKIKNRFQGQPEVYKSFL 326

Query: 71  EVMKDF-KAQR------------IDTAGVIARVKELFKGHRDLILGFNTFLP 109
           E++  + K QR            +    V A+V +LFK   DL+  F  FLP
Sbjct: 327 EILHTYQKEQRNAKEAGGNYTPTLTEQQVYAQVAQLFKNQEDLLSEFGQFLP 378


>gi|268054323|gb|ACY92648.1| Sin3A-like transcriptional regulator [Saccoglossus kowalevskii]
          Length = 1057

 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 105/288 (36%), Positives = 166/288 (57%), Gaps = 13/288 (4%)

Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQ 558
           E+D S+C+R   SYR LPK+Y  P  + RT L  EVLND WVS  S SED  F   +K Q
Sbjct: 319 EIDFSSCKRYGASYRALPKSYTQPKCTGRTPLCKEVLNDTWVSFPSWSEDSQFVTSKKTQ 378

Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TAL 614
           YEE ++RCED+RFELD++LE+   T + +E + +K++  + +     R+++        +
Sbjct: 379 YEEHIYRCEDERFELDIVLETNLQTIRVLEGVQKKLSRMSSEEAAKFRLDNSLGGTTEVI 438

Query: 615 NLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKN 674
           + + I R+YGD   D+++ L+KN ++A+P++L RLK K+EEW   +  FNK+W +   K 
Sbjct: 439 HRKAIHRIYGDKSSDIIEGLKKNPAVAVPLVLRRLKAKEEEWREAQRGFNKIWRDQNEKY 498

Query: 675 YHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEF 734
           Y KSLDH+   FKQ D+K+L +K+L  EI+ + +++++        A GN      HL +
Sbjct: 499 YLKSLDHQGINFKQTDTKALRSKSLLNEIETVFDERQES-------AEGNGDYAGSHLSY 551

Query: 735 EYSDPDIHEDLYQLIKYSCGEMCTTEQLD--KVMKIWTTFLEPMLGVP 780
            + D  I ED   LI +      +  + D  K+ ++   FL   +  P
Sbjct: 552 IFHDKAILEDAASLIIHHVKRQTSIHKEDKQKIKQLLLYFLPDFMFGP 599



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 45/102 (44%), Positives = 63/102 (61%), Gaps = 16/102 (15%)

Query: 117 PLEDEQPPPKK---PVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI---- 169
           P  + Q P ++   PVEF  AIN+VNKIK RFQG   +YK+FL+IL+ Y+KE +++    
Sbjct: 61  PQHNSQTPSQQVSQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNVKESG 120

Query: 170 ---------TEVYQEVEALFQDHPDLLEEFTHFLPDSSGAAS 202
                     EVY +V  LFQ+  DLL+EF  FLPD++ A +
Sbjct: 121 GCYQPSLSEAEVYAQVAKLFQNQEDLLQEFGQFLPDANSAQA 162



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 38/61 (62%), Gaps = 2/61 (3%)

Query: 352 ELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFL 409
           E +F +KV+  L+    Y+ FLRCL L+ +E+I+R+EL  +    LG++P+L   F  FL
Sbjct: 235 EFAFFDKVRKALKSQEVYENFLRCLVLFNQEVISRAELVQIATPFLGKFPELFKWFKEFL 294

Query: 410 A 410
            
Sbjct: 295 G 295



 Score = 43.5 bits (101), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 13/83 (15%)

Query: 40  AQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDF-KAQR------------IDTAGV 86
           +Q +  N A+ Y+  +K+ FQ + + Y  FLE++  + K QR            +  A V
Sbjct: 73  SQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNVKESGGCYQPSLSEAEV 132

Query: 87  IARVKELFKGHRDLILGFNTFLP 109
            A+V +LF+   DL+  F  FLP
Sbjct: 133 YAQVAKLFQNQEDLLQEFGQFLP 155


>gi|320167276|gb|EFW44175.1| transcriptional regulator [Capsaspora owczarzaki ATCC 30864]
          Length = 1320

 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 86/213 (40%), Positives = 142/213 (66%), Gaps = 4/213 (1%)

Query: 496 PIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMR 555
           P Q +D + C+R   SYR LP ++++P  + RTEL   VLND WVS  + SED  F   R
Sbjct: 730 PWQPVDFNKCKRLGHSYRALPNDFILPRCTGRTELCESVLNDQWVSFPTWSEDTVFASSR 789

Query: 556 KNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFTA-- 613
           KN +EE+L+R ED+RFELDM++E+   T + +E + ++I++ + +    +R+  +     
Sbjct: 790 KNVHEEALYRVEDERFELDMVIEANLATIRVLEPIAKRISSLSREDAAKLRLHKNLGGQS 849

Query: 614 --LNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIY 671
             ++L+ I+RLYG+   +V+  L+KN ++A+PV+L RLKQK EEW R + ++NK+W +++
Sbjct: 850 EVIHLKAIQRLYGERSGEVVQALKKNPAVAVPVVLRRLKQKDEEWRRVQREWNKIWRDVH 909

Query: 672 SKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIK 704
            +N  +SLDH+   FKQ D K++G++AL  E++
Sbjct: 910 EQNRLRSLDHQGLTFKQTDKKAIGSRALQQEME 942



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 91/202 (45%), Positives = 112/202 (55%), Gaps = 46/202 (22%)

Query: 42  KLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLI 101
           KL   DAL+YL  VK  F ++ + Y+ FL++MKDFK+Q IDT GVI RV  LF+GH DLI
Sbjct: 101 KLKVEDALSYLDQVKLQFINQMQVYNQFLDIMKDFKSQSIDTPGVILRVSTLFEGHPDLI 160

Query: 102 LGFNTFLPKGYEITLPLED----EQP----------------------PP---------- 125
            GFNTFLP GY+I   LE      QP                      PP          
Sbjct: 161 SGFNTFLPPGYKIEASLEGAVTVHQPGDRGPQQIYPGQLQHLLPRVPTPPTPAQQAQAQQ 220

Query: 126 ----------KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQE 175
                     K+PVEF  AIN+VNKIKTRF      YK+FL+IL  Y+KE ++I EVY +
Sbjct: 221 AQAAVQQAARKQPVEFNHAINYVNKIKTRFSQQPETYKAFLEILQTYQKEQRTIKEVYAQ 280

Query: 176 VEALFQDHPDLLEEFTHFLPDS 197
           V  LF   PDLL EF+ FLP++
Sbjct: 281 VANLFVSQPDLLNEFSQFLPEA 302



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 7/83 (8%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           ++ E+A+++++++K +F     VY  FLDI+  ++ ++     V   V  LF+ HPDL+ 
Sbjct: 102 LKVEDALSYLDQVKLQFINQMQVYNQFLDIMKDFKSQSIDTPGVILRVSTLFEGHPDLIS 161

Query: 189 EFTHFLPDS-------SGAASIH 204
            F  FLP          GA ++H
Sbjct: 162 GFNTFLPPGYKIEASLEGAVTVH 184



 Score = 53.1 bits (126), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 52/106 (49%), Gaps = 6/106 (5%)

Query: 329 NFGMHPVSSSYDDKNAMKSMFSQELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSE 386
            FG  P  +     ++M     +EL F E+VK  L +   Y+ FLR L+++T + ++R+E
Sbjct: 550 TFGAPPTGAP----SSMGQNSGEELVFFERVKKALNNQQVYENFLRILNMFTNDQMSRNE 605

Query: 387 LQSLVGDLLGRYPDLMDGFNGFLARCEKSEELLADVMSKKSLWNEG 432
           L   V  +LG++ DL + F  FL      + +L   M    L   G
Sbjct: 606 LVIAVQGILGKHADLFEWFKSFLGFPLNEQTVLPHHMGPMGLMQPG 651



 Score = 47.4 bits (111), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 39/74 (52%)

Query: 41  QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDL 100
           Q +  N A+ Y+  +K  F  + E Y  FLE+++ ++ ++     V A+V  LF    DL
Sbjct: 232 QPVEFNHAINYVNKIKTRFSQQPETYKAFLEILQTYQKEQRTIKEVYAQVANLFVSQPDL 291

Query: 101 ILGFNTFLPKGYEI 114
           +  F+ FLP+   I
Sbjct: 292 LNEFSQFLPEAVPI 305


>gi|291238286|ref|XP_002739061.1| PREDICTED: Sin3A-like transcriptional regulator [Saccoglossus
           kowalevskii]
          Length = 1107

 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 105/280 (37%), Positives = 166/280 (59%), Gaps = 12/280 (4%)

Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQ 558
           E+D S+C+R   SYR LPK+Y  P  + RT L  EVLND WVS  S SED  F   +K Q
Sbjct: 534 EIDFSSCKRYGASYRALPKSYTQPKCTGRTPLCKEVLNDTWVSFPSWSEDSQFVTSKKTQ 593

Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TAL 614
           YEE ++RCED+RFELD++LE+   T + +E + +K++  + +     R+++        +
Sbjct: 594 YEEHIYRCEDERFELDIVLETNLQTIRVLEGVQKKLSRMSSEEAAKFRLDNSLGGTTEVI 653

Query: 615 NLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKN 674
           + + I R+YGD   D+++ L+KN ++A+P++L RLK K+EEW   +  FNK+W +   K 
Sbjct: 654 HRKAIHRIYGDKSSDIIEGLKKNPAVAVPLVLRRLKAKEEEWREAQRGFNKIWRDQNEKY 713

Query: 675 YHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEF 734
           Y KSLDH+   FKQ D+K+L +K+L  EI+ + +++++        A GN      HL +
Sbjct: 714 YLKSLDHQGINFKQTDTKALRSKSLLNEIETVFDERQES-------AEGNGDYAGSHLSY 766

Query: 735 EYSDPDIHEDLYQLIKYSCGEMCTTEQLDKVMKIWTTFLE 774
            + D  I ED   LI +      T++   +  + ++TFLE
Sbjct: 767 IFHDKAILEDAASLIIHHVKRQ-TSKYDPEPEEYYSTFLE 805



 Score = 97.4 bits (241), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 45/79 (56%), Positives = 58/79 (73%)

Query: 42  KLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLI 101
           +L   DAL+YL  VK  F ++ + Y+DFL++MK+FK+Q IDT GVI RV  LFKGH DLI
Sbjct: 134 RLKVEDALSYLDQVKLQFGNQPQVYNDFLDIMKEFKSQSIDTPGVINRVSNLFKGHPDLI 193

Query: 102 LGFNTFLPKGYEITLPLED 120
           +GFNTFLP GY+I +   D
Sbjct: 194 VGFNTFLPPGYKIEVQAND 212



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 46/109 (42%), Positives = 67/109 (61%), Gaps = 14/109 (12%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI-------------TEVY 173
           +PVEF  AIN+VNKIK RFQG   +YK+FL+IL+ Y+KE +++              EVY
Sbjct: 292 QPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNVKESGGCYQPSLSEAEVY 351

Query: 174 QEVEALFQDHPDLLEEFTHFLPDSSGA-ASIHYVPSGRNSILRDRSSAM 221
            +V  LFQ+  DLL+EF  FLPD++ A A+ +++      +  D SS +
Sbjct: 352 AQVAKLFQNQEDLLQEFGQFLPDANSAQATTNFLKHRPPGVTNDHSSTV 400



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 39/64 (60%), Gaps = 2/64 (3%)

Query: 352 ELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFL 409
           E +F +KV+  L+    Y+ FLRCL L+ +E+I+R+EL  +    LG++P+L   F  FL
Sbjct: 450 EFAFFDKVRKALKSQEVYENFLRCLVLFNQEVISRAELVQIATPFLGKFPELFKWFKEFL 509

Query: 410 ARCE 413
              E
Sbjct: 510 GYKE 513



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 40/67 (59%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           ++ E+A+++++++K +F     VY  FLDI+  ++ ++     V   V  LF+ HPDL+ 
Sbjct: 135 LKVEDALSYLDQVKLQFGNQPQVYNDFLDIMKEFKSQSIDTPGVINRVSNLFKGHPDLIV 194

Query: 189 EFTHFLP 195
            F  FLP
Sbjct: 195 GFNTFLP 201



 Score = 43.5 bits (101), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 13/83 (15%)

Query: 40  AQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDF-KAQR------------IDTAGV 86
           +Q +  N A+ Y+  +K+ FQ + + Y  FLE++  + K QR            +  A V
Sbjct: 291 SQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNVKESGGCYQPSLSEAEV 350

Query: 87  IARVKELFKGHRDLILGFNTFLP 109
            A+V +LF+   DL+  F  FLP
Sbjct: 351 YAQVAKLFQNQEDLLQEFGQFLP 373


>gi|194756502|ref|XP_001960516.1| GF11469 [Drosophila ananassae]
 gi|190621814|gb|EDV37338.1| GF11469 [Drosophila ananassae]
          Length = 2110

 Score =  184 bits (466), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 120/403 (29%), Positives = 199/403 (49%), Gaps = 57/403 (14%)

Query: 354  SFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLAR 411
            +F +KV+  LR    Y  FLRCL L+ +EI++++E              L++  + FL +
Sbjct: 940  AFFDKVRKALRSPEVYDNFLRCLTLFNQEIVSKTE--------------LLNLVSPFLMK 985

Query: 412  CEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRLDKS 471
                     D +   +    G +   + +    R       +   DR             
Sbjct: 986  FPDLLRWFTDFLGPPAGQGAGGLIDGMPLAATQRQGGGGSSNSSHDR------------- 1032

Query: 472  VAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELG 531
                            +  +  A+ +Q++DLS+C+R   SY  LP++ +    S RT L 
Sbjct: 1033 ----------------ASGQGAAEYVQDVDLSSCKRLGASYCALPQSTVPKKCSGRTALC 1076

Query: 532  AEVLNDHWVSV-TSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEEL 590
             EVLND WVS  T  SED +F   RK Q+EE+++R ED+RFELD+++E  + T + +E +
Sbjct: 1077 REVLNDKWVSFPTWASEDSTFVTSRKTQFEETIYRTEDERFELDLVIEVNSATIRVLENV 1136

Query: 591  LEKINNNTIKTDGPIRVEDHFTA----LNLRCIERLYGDHGLDVMDVLRKNASLALPVIL 646
             +K++  + +      ++DH       ++ R I R+YGD   +++  ++KN S+A+P++L
Sbjct: 1137 QKKMSRMSTEELAKFHLDDHLGGTSQTIHQRAIHRIYGDKSGEIIQGMKKNPSVAVPIVL 1196

Query: 647  TRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEI 706
             RLK K+EEW   +  FNK W E   K Y KSLDH++  FK  D K+L +K+L  EI+ +
Sbjct: 1197 KRLKVKEEEWREAQKTFNKQWREQNEKYYLKSLDHQAINFKPNDMKALRSKSLFNEIETL 1256

Query: 707  SEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLI 749
             +++  ++D  +  A        PHL   Y D  I +D   L+
Sbjct: 1257 YDERHDQEDDSMEPAG-------PHLVLPYKDKTILDDAANLL 1292



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 50/119 (42%), Positives = 67/119 (56%), Gaps = 9/119 (7%)

Query: 19  ISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKA 78
           IS    P G +    G  G    +L   DAL+YL  VK  + D+ + Y++FL++MK+FK+
Sbjct: 257 ISGNSVPGGASTPPQGQPGNATPRLKVEDALSYLDQVKFQYADQPQIYNNFLDIMKEFKS 316

Query: 79  QRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEI---------TLPLEDEQPPPKKP 128
             IDT GVI RV  LFKGH +LI GFN FLP GY+I         ++P+     PP  P
Sbjct: 317 HCIDTPGVIERVSTLFKGHTELIYGFNMFLPPGYKIEIHSDALGCSVPVVSMPSPPGAP 375



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 48/125 (38%), Positives = 59/125 (47%), Gaps = 28/125 (22%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI-------------TEVY 173
           +PVEF  AI +VNKIK RFQ     YK FL+IL+ Y+KE K +              EVY
Sbjct: 577 QPVEFNHAITYVNKIKNRFQNQPAKYKKFLEILHAYQKEQKGMKEGSLNQVKMLTEQEVY 636

Query: 174 QEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQVHVDKKE 233
            +V  LF    DLL EF  FLPD++   S  Y               M  A  VH D  +
Sbjct: 637 TQVAKLFGQDEDLLREFGQFLPDATNHQSGQY---------------MSKAAAVHNDHGK 681

Query: 234 RAMAS 238
           R  A+
Sbjct: 682 RPTAT 686



 Score = 48.9 bits (115), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 22/87 (25%), Positives = 46/87 (52%), Gaps = 6/87 (6%)

Query: 115 TLPLEDEQPPPKKP------VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKS 168
           ++P     PP  +P      ++ E+A+++++++K ++     +Y +FLDI+  ++     
Sbjct: 261 SVPGGASTPPQGQPGNATPRLKVEDALSYLDQVKFQYADQPQIYNNFLDIMKEFKSHCID 320

Query: 169 ITEVYQEVEALFQDHPDLLEEFTHFLP 195
              V + V  LF+ H +L+  F  FLP
Sbjct: 321 TPGVIERVSTLFKGHTELIYGFNMFLP 347



 Score = 41.6 bits (96), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 15/86 (17%)

Query: 123 PPPKKP------VEFEEAIN--------FVNKIKTRFQGDDHVYKSFLDILNMYRKENKS 168
           PP K+P      V F EA +        F +K++   +  + VY +FL  L ++ +E  S
Sbjct: 913 PPAKRPKPYCRDVSFSEASSKCTISDAAFFDKVRKALRSPE-VYDNFLRCLTLFNQEIVS 971

Query: 169 ITEVYQEVEALFQDHPDLLEEFTHFL 194
            TE+   V       PDLL  FT FL
Sbjct: 972 KTELLNLVSPFLMKFPDLLRWFTDFL 997


>gi|326435441|gb|EGD81011.1| hypothetical protein PTSG_10955 [Salpingoeca sp. ATCC 50818]
          Length = 1581

 Score =  184 bits (466), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 90/183 (49%), Positives = 123/183 (67%), Gaps = 9/183 (4%)

Query: 29  TQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIA 88
           T++   G  GG ++L   DAL YL  VK  F  +   Y+ FL +MKDFK+Q I+T  VI 
Sbjct: 431 TEMASNGAFGGHRRLKVEDALTYLDRVKAHFGSQPTVYNSFLNIMKDFKSQNINTPDVIK 490

Query: 89  RVKELFKGHRDLILGFNTFLPKGYEITLPLEDEQPP-------PKKPVEFEEAINFVNKI 141
            V +LF+GH +LI+GFNTFLP GY+I +P  DE  P       P+K +EF  AI +VNKI
Sbjct: 491 NVSQLFEGHPELIVGFNTFLPPGYKIEIP--DESQPEQIVVSQPRKQLEFSHAIQYVNKI 548

Query: 142 KTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAA 201
           KTRFQ +  VYK+F  IL+ Y+KE K+I+EVY+++  LF++H DLLEEF+ FLP++  AA
Sbjct: 549 KTRFQSNSEVYKTFRKILDTYQKEQKTISEVYEQLAKLFENHIDLLEEFSQFLPEAIPAA 608

Query: 202 SIH 204
             +
Sbjct: 609 KAY 611



 Score =  119 bits (299), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 75/220 (34%), Positives = 117/220 (53%), Gaps = 8/220 (3%)

Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGA---EVLNDHWVSVTS-GSEDYSFKHM 554
           ++DL+ C +   SYR LP  +     S R  +     E LN+ +VS  S  SED  F   
Sbjct: 750 DIDLNTCLQVEVSYRRLPDEFQHAQCSGRKNMDPSLLETLNNRYVSFPSWTSEDNQFVTG 809

Query: 555 RKNQYEESLFRCEDDRFELDMLL----ESVNVTTKRVEELLEKINNNTIKTDGPIRVEDH 610
           +K QYE++LF+ ED+RFELDMLL     ++N       E   K N     T    +   +
Sbjct: 810 KKTQYEDNLFKAEDERFELDMLLATNQSTINALQTCYRECRSKTNAGETYTLDTKQFGTN 869

Query: 611 FTALNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEI 670
             A++ R ++RLYG+H  +V++ L  N    LP+I++RL QKQ+EW   +  +N+ W  +
Sbjct: 870 SHAIHHRSLKRLYGEHLEEVLNGLASNPLKNLPIIISRLSQKQKEWKEVQFSWNREWKLV 929

Query: 671 YSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKK 710
           + +NY ++LD      K++D   L  KA+    KE +E +
Sbjct: 930 FDENYLRALDQIGPSSKKKDLNELKPKAIRQGFKEQAEAR 969



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 80/328 (24%), Positives = 143/328 (43%), Gaps = 66/328 (20%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           ++ E+A+ +++++K  F     VY SFL+I+  ++ +N +  +V + V  LF+ HP+L+ 
Sbjct: 445 LKVEDALTYLDRVKAHFGSQPTVYNSFLNIMKDFKSQNINTPDVIKNVSQLFEGHPELIV 504

Query: 189 EFTHFL--------PDSSG---------------AASIHYVPSGRNSI---LRDRSSAMP 222
            F  FL        PD S                + +I YV    N I    +  S    
Sbjct: 505 GFNTFLPPGYKIEIPDESQPEQIVVSQPRKQLEFSHAIQYV----NKIKTRFQSNSEVYK 560

Query: 223 TARQVHVDKKERAMASHADRDLSVDRPDPDHDRVL-----LKSDKDQRRRGEKERERRDD 277
           T R++ +D  ++   + ++    + +   +H  +L        +     +  KER+ ++ 
Sbjct: 561 TFRKI-LDTYQKEQKTISEVYEQLAKLFENHIDLLEEFSQFLPEAIPAAKAYKERQLQEA 619

Query: 278 HRRERERDDRDFENDVNRDFSMQRFPHKRKSARKIEDSTAEPLHQGGE-----GDENFGM 332
            R++++R     +              +R +A   E   A+P  +  E     G EN   
Sbjct: 620 ARQQQKRKAEAPKQT-----------QQRAAASAAETDEAQPTKRAKEERRLTGVEN--- 665

Query: 333 HPVSSSYDDKNAMKSMFSQELSFCEKVKDKL--RDDYQEFLRCLHLYTKEIITRSELQSL 390
            P+SS          + + EL F + VK  L  R  Y +FLRCL+LY   II+R EL ++
Sbjct: 666 RPLSSY---------VLTDELQFFDNVKRLLQPRPLYDDFLRCLNLYNNNIISREELVTV 716

Query: 391 VGDLLGRYPDLMDGFNGFLARCEKSEEL 418
             + L +YP L+  F  F+   +  E L
Sbjct: 717 ASNFLDKYPSLLRWFRRFVGVGDDGEVL 744


>gi|410912758|ref|XP_003969856.1| PREDICTED: paired amphipathic helix protein Sin3a-like [Takifugu
           rubripes]
          Length = 1284

 Score =  184 bits (466), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 103/287 (35%), Positives = 163/287 (56%), Gaps = 14/287 (4%)

Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQ 558
           E+D ++C+R  PSYR LPK+Y  P  + RT L  EVLND WVS  S SED +F   +K Q
Sbjct: 557 EIDYASCKRLGPSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVSSKKTQ 616

Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TAL 614
           YEE ++RCED+RFELD++LES   T + +E +  +++  + +     ++++        +
Sbjct: 617 YEEHIYRCEDERFELDVVLESNLATIRALETVQRRLSRMSAEEQLRFKLDNTMGGSSEVI 676

Query: 615 NLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKN 674
           + + I+R+YGD   D++D L +N ++++P++L RLK K EEW   +  FNK+W E   K 
Sbjct: 677 HRKAIQRIYGDKAHDIIDGLHRNPAVSVPIVLKRLKMKDEEWREAQKGFNKIWREQNEKY 736

Query: 675 YHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISE--KKRKEDDVLLAIAAGNRRSIVPHL 732
           Y KSLDH+   FKQ D+K L +K L  EI+ + +  ++R  ++       G      PH+
Sbjct: 737 YLKSLDHQGINFKQNDTKVLRSKTLLNEIEMLYDDRQERASEETATPPLTG------PHM 790

Query: 733 EFEYSDPDIHEDLYQLIKYSCGEMCTTEQLD--KVMKIWTTFLEPML 777
              Y D  I +D   LI +        ++ D  K+ +I   F+  +L
Sbjct: 791 NLAYDDSQILDDAAALIIHHVKRQVGIQKEDKYKIKQIIHHFIPDLL 837



 Score =  103 bits (257), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 48/89 (53%), Positives = 62/89 (69%)

Query: 32  VGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVK 91
           +    G   Q+L   DAL+YL  VK  F +K + Y+DFL++MK+FK+Q IDT GVI RV 
Sbjct: 106 ITSAQGQQFQRLKVEDALSYLDQVKLQFGNKPQVYNDFLDIMKEFKSQSIDTPGVINRVS 165

Query: 92  ELFKGHRDLILGFNTFLPKGYEITLPLED 120
           +LFKGH DLI+GFNTFLP GY+I +   D
Sbjct: 166 QLFKGHPDLIMGFNTFLPPGYKIEVQTND 194



 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/142 (35%), Positives = 76/142 (53%), Gaps = 22/142 (15%)

Query: 124 PP---KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI----------- 169
           PP    +PVEF  AIN+VNKIK RFQG   +YK+FL+IL+ Y+KE ++            
Sbjct: 302 PPFQNNQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPAL 361

Query: 170 --TEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQV 227
              EVY +V  LF++  DLL EF  FLPD++ +  +      R   +R+      T ++ 
Sbjct: 362 TEQEVYTQVARLFKNQEDLLSEFGQFLPDANSSILLGKATPDRAESVRNDHGG--TVKRP 419

Query: 228 HVDKKERAMASHADRDLSVDRP 249
            ++ K+R     +   L+V RP
Sbjct: 420 LLNTKQRL----SQNGLAVRRP 437



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/68 (45%), Positives = 43/68 (63%), Gaps = 2/68 (2%)

Query: 350 SQELSFCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNG 407
           S E  F EKV+  LR  + Y  FLRCLH++++E+I+R+EL  LV   LG++P+L   F  
Sbjct: 468 STETLFFEKVRKALRSSEAYDNFLRCLHIFSQELISRAELVQLVIPFLGKFPELFSWFKN 527

Query: 408 FLARCEKS 415
           FL   E S
Sbjct: 528 FLGYWESS 535



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 27/95 (28%), Positives = 48/95 (50%), Gaps = 14/95 (14%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           ++ E+A+++++++K +F     VY  FLDI+  ++ ++     V   V  LF+ HPDL+ 
Sbjct: 117 LKVEDALSYLDQVKLQFGNKPQVYNDFLDIMKEFKSQSIDTPGVINRVSQLFKGHPDLIM 176

Query: 189 EFTHFLP-------------DSSGAASIHYV-PSG 209
            F  FLP             + +    IHY+ P G
Sbjct: 177 GFNTFLPPGYKIEVQTNDLVNVTTPGQIHYITPHG 211


>gi|156385204|ref|XP_001633521.1| predicted protein [Nematostella vectensis]
 gi|156220592|gb|EDO41458.1| predicted protein [Nematostella vectensis]
          Length = 1161

 Score =  182 bits (463), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 119/325 (36%), Positives = 185/325 (56%), Gaps = 16/325 (4%)

Query: 477 KDVGPKMSMYSSKDKYLAKPIQ-ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVL 535
           KD  P  SM   K++   +    E+D ++C+R   SYR LPK+Y  P  S R+++  EVL
Sbjct: 424 KDSSPMESMSGFKERTSGELAHLEIDYASCKRYGTSYRALPKSYTQPKCSGRSDMCKEVL 483

Query: 536 NDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLE-KI 594
           ND WVS  S SED  F   RK QYEE +FRCED+RFELD++LES N++T RV E ++ K+
Sbjct: 484 NDTWVSFPSWSEDTPFPGTRKTQYEEYIFRCEDERFELDVVLES-NLSTIRVLEAVQKKL 542

Query: 595 NNNTIKTDGPIRVEDHFTA----LNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLK 650
              + +     R++         ++ + I+R+YGD   D++D ++K  ++A+P++L R +
Sbjct: 543 QRMSSEEQQKFRLDSCLGGTSEIVHKKAIQRIYGDKAPDIIDGIKKTPAVAVPLVLKR-Q 601

Query: 651 QKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKK 710
            K+EEW   +  FNK+W +   K Y KSLDH+   FKQ D K++ +K+L  EI+ I +++
Sbjct: 602 AKEEEWRESQRQFNKIWRDQNEKYYLKSLDHQGITFKQNDLKAMRSKSLMNEIESIFDER 661

Query: 711 RKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLIKYSCGEMCTTEQLDKV-MKIW 769
           +++       A GN  +  PH+ F Y D  I +D   LI +      +  + DK  +K+ 
Sbjct: 662 QEQ------AAEGNADAGGPHIVFTYQDKSILDDAAGLIVHHMKRQTSIHKEDKAKIKLL 715

Query: 770 TTFLEPMLGVPSRPQGAEDTEDVVK 794
                P L    R + ++D ED VK
Sbjct: 716 LHCFVPDLFFAPRGELSDD-EDSVK 739



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 50/109 (45%), Positives = 66/109 (60%), Gaps = 23/109 (21%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI------------TEVY 173
           ++PVEF  AIN+VNKIK RFQG   +YK+FL+IL+ Y+KE K+I             EVY
Sbjct: 198 QQPVEFNHAINYVNKIKNRFQGQPEIYKAFLEILHTYQKEQKNIKEAAMQGTPLSEQEVY 257

Query: 174 QEVEALFQDHPDLLEEFTHFLPDSSGAASI-----------HYVPSGRN 211
           ++V  LFQ+  DLL+EF+ FLPD++G  S            H   SGRN
Sbjct: 258 KQVAKLFQNQEDLLKEFSQFLPDANGGNSAGLIAASASRMSHVTGSGRN 306



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 43/79 (54%), Positives = 58/79 (73%)

Query: 42  KLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLI 101
           +L   DAL+YL  VK  F ++ + Y+ FL++MK+FK+Q IDT GVI+RV  LFKGH +LI
Sbjct: 22  RLKVEDALSYLDQVKLQFGNQPQVYNHFLDIMKEFKSQSIDTPGVISRVSSLFKGHPELI 81

Query: 102 LGFNTFLPKGYEITLPLED 120
           +GFNTFLP GY+I +   D
Sbjct: 82  VGFNTFLPPGYKIEVHAHD 100



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/61 (44%), Positives = 40/61 (65%), Gaps = 2/61 (3%)

Query: 352 ELSFCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFL 409
           E +F +KV+  L+  + Y  FLRCL L+ +E+I+RSEL  L  + LG++PDL+  F  FL
Sbjct: 362 EYAFFDKVRKALKSPEVYDNFLRCLVLFNQEVISRSELVQLASNFLGKFPDLLTWFKEFL 421

Query: 410 A 410
            
Sbjct: 422 G 422



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 41/67 (61%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           ++ E+A+++++++K +F     VY  FLDI+  ++ ++     V   V +LF+ HP+L+ 
Sbjct: 23  LKVEDALSYLDQVKLQFGNQPQVYNHFLDIMKEFKSQSIDTPGVISRVSSLFKGHPELIV 82

Query: 189 EFTHFLP 195
            F  FLP
Sbjct: 83  GFNTFLP 89


>gi|332022486|gb|EGI62793.1| Paired amphipathic helix protein Sin3a [Acromyrmex echinatior]
          Length = 1489

 Score =  182 bits (463), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 103/270 (38%), Positives = 160/270 (59%), Gaps = 7/270 (2%)

Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQ 558
           E+D + C+R   SY  LPK+Y+ P  S RT+L  EVLND WVS  + SED +F   RK Q
Sbjct: 700 EIDYTACKRLGASYCALPKSYIQPKCSGRTQLCKEVLNDTWVSFPTWSEDSTFVTSRKTQ 759

Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TAL 614
           YEES++RCED+RFELD+++E+   T + +E + +K+N  T +     ++++      + +
Sbjct: 760 YEESIYRCEDERFELDVVIETNASTIRVLEGVHKKMNRMTQEEVQKYKLDECMGGCSSTI 819

Query: 615 NLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKN 674
           + R I+R+YGD   D+++ L++N  +A+PV+L RLK K+EEW   +  FNK+W E   K 
Sbjct: 820 HQRAIKRIYGDKASDIIEGLKRNPIVAVPVVLRRLKAKEEEWREAQKGFNKIWREQNEKY 879

Query: 675 YHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEF 734
           Y KSLDH+   FKQ D K+L +K+L  EI+ + +++ ++ D       GN     PHL  
Sbjct: 880 YLKSLDHQGINFKQNDVKALRSKSLFNEIETLYDERHEQGDDGNGDGQGNSG---PHLIL 936

Query: 735 EYSDPDIHEDLYQLIKYSCGEMCTTEQLDK 764
            Y D  + +D   L+ +         + DK
Sbjct: 937 SYKDKSVLDDAANLLIHHVKRQTAVHKEDK 966



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 45/74 (60%), Positives = 57/74 (77%)

Query: 41  QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDL 100
           Q+L   DAL+YL  VK  F D+ + Y+DFL++MK+FK+Q IDT GVI RV  LFKGH +L
Sbjct: 176 QRLKVEDALSYLDQVKYKFSDQPQVYNDFLDIMKEFKSQSIDTPGVITRVSHLFKGHPEL 235

Query: 101 ILGFNTFLPKGYEI 114
           I+GFNTFLP GY+I
Sbjct: 236 IVGFNTFLPPGYKI 249



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 40/94 (42%), Positives = 53/94 (56%), Gaps = 22/94 (23%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI----------------- 169
           +PVEF  AIN+VNKIK RFQG    YK FL+IL+ Y+KE +++                 
Sbjct: 373 QPVEFNHAINYVNKIKNRFQGQPDKYKRFLEILHTYQKEQRNLKESGHMGGTSSGATGGT 432

Query: 170 -----TEVYQEVEALFQDHPDLLEEFTHFLPDSS 198
                 EVY +V  LF++  DLL EF  FLPD++
Sbjct: 433 KHLTEAEVYSQVAKLFENQEDLLAEFGQFLPDAT 466



 Score = 51.6 bits (122), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 40/67 (59%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           ++ E+A+++++++K +F     VY  FLDI+  ++ ++     V   V  LF+ HP+L+ 
Sbjct: 178 LKVEDALSYLDQVKYKFSDQPQVYNDFLDIMKEFKSQSIDTPGVITRVSHLFKGHPELIV 237

Query: 189 EFTHFLP 195
            F  FLP
Sbjct: 238 GFNTFLP 244



 Score = 46.2 bits (108), Expect = 0.090,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 54/125 (43%), Gaps = 23/125 (18%)

Query: 8   VYMNSQIKRPMISSRGEPSGQTQVVGGGGGGG-AQKLTTNDALAYLKAVKDIFQDKREKY 66
           VY NS +      +  +   Q   V  GG    +Q +  N A+ Y+  +K+ FQ + +KY
Sbjct: 339 VYNNSHVSTAQAQAVSQALNQADGVSTGGQTQQSQPVEFNHAINYVNKIKNRFQGQPDKY 398

Query: 67  DDFLEVMKDF-KAQR---------------------IDTAGVIARVKELFKGHRDLILGF 104
             FLE++  + K QR                     +  A V ++V +LF+   DL+  F
Sbjct: 399 KRFLEILHTYQKEQRNLKESGHMGGTSSGATGGTKHLTEAEVYSQVAKLFENQEDLLAEF 458

Query: 105 NTFLP 109
             FLP
Sbjct: 459 GQFLP 463


>gi|213626301|gb|AAI70554.1| Unknown (protein for MGC:197281) [Xenopus laevis]
          Length = 1278

 Score =  182 bits (463), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 104/288 (36%), Positives = 169/288 (58%), Gaps = 17/288 (5%)

Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQ 558
           E+D ++C+    SYR LPK++  P  + RT L  EVLND WVS  S SED +F   +K Q
Sbjct: 550 EIDYASCKCLGSSYRALPKSFQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVSSKKTQ 609

Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TAL 614
           YEE ++RCED+RFELD++LE+   T + +E + +K++  + +     R+++        +
Sbjct: 610 YEEHIYRCEDERFELDVVLETNLATIRVLETVQKKLSRLSAEDQAKFRLDNTLGGTSEVI 669

Query: 615 NLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKN 674
           + + ++R+Y D   D++D L+KN ++A+P++L RLK K+EEW   +  FNK+W E   K 
Sbjct: 670 HRKALQRIYADKAADIIDGLKKNPAVAVPIVLKRLKMKEEEWREAQRGFNKIWREQNEKY 729

Query: 675 YHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRK---EDDVLLAIAAGNRRSIVPH 731
           Y KSLDH+   +KQ D+K L +K+L  EI+ I +++++   ED+    I++G      PH
Sbjct: 730 YLKSLDHQGINYKQIDTKVLRSKSLLNEIESIYDERQEQVSEDNS--GISSG------PH 781

Query: 732 LEFEYSDPDIHEDLYQLIKYSCGEMCTTEQLD--KVMKIWTTFLEPML 777
           L   Y D  I +D   LI +        ++ D  K+ +I   F+  +L
Sbjct: 782 LTLTYDDKQILDDAASLIIHHVKRQTGIQKEDKYKIKQIVYHFIPDLL 829



 Score =  101 bits (251), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 46/84 (54%), Positives = 62/84 (73%)

Query: 37  GGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKG 96
           G   Q+L   DAL+YL  VK  F ++ + Y+DFL++MK+FK+Q IDT GVI+RV +LFKG
Sbjct: 114 GQQFQRLKVEDALSYLDQVKLQFGNQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKG 173

Query: 97  HRDLILGFNTFLPKGYEITLPLED 120
           H +LI+GFNTFLP GY+I +   D
Sbjct: 174 HPELIMGFNTFLPPGYKIEVQTND 197



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 40/90 (44%), Positives = 56/90 (62%), Gaps = 13/90 (14%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI-------------TEVY 173
           +PVEF  AIN+VNKIK RFQG   +YKSFL+IL+ ++KE ++               EVY
Sbjct: 304 QPVEFNHAINYVNKIKNRFQGQPDIYKSFLEILHTHQKEQRNAKEAGGNYTPALTEQEVY 363

Query: 174 QEVEALFQDHPDLLEEFTHFLPDSSGAASI 203
            +V  LF++  DLL EF  FLPD++ +  +
Sbjct: 364 AQVARLFKNQEDLLSEFGQFLPDANSSVLL 393



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 2/66 (3%)

Query: 352 ELSFCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFL 409
           E  F +KV+  LR  + Y  FLRCL ++ +E+I+RSEL  LV   L ++P+L   F  FL
Sbjct: 468 ESQFFDKVRKALRSAEAYDNFLRCLVIFNQEVISRSELVQLVSPFLAKFPELFTWFKNFL 527

Query: 410 ARCEKS 415
              E S
Sbjct: 528 GYKESS 533



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 40/67 (59%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           ++ E+A+++++++K +F     VY  FLDI+  ++ ++     V   V  LF+ HP+L+ 
Sbjct: 120 LKVEDALSYLDQVKLQFGNQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPELIM 179

Query: 189 EFTHFLP 195
            F  FLP
Sbjct: 180 GFNTFLP 186


>gi|195029591|ref|XP_001987655.1| GH19841 [Drosophila grimshawi]
 gi|193903655|gb|EDW02522.1| GH19841 [Drosophila grimshawi]
          Length = 2179

 Score =  182 bits (462), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 126/405 (31%), Positives = 208/405 (51%), Gaps = 53/405 (13%)

Query: 352  ELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFL 409
            +++F +KV+  LR+   Y  FLRCL L+ +EI++++E              L+D  + FL
Sbjct: 977  DMAFFDKVRKALRNPEVYDNFLRCLTLFNQEIVSKTE--------------LLDLVSPFL 1022

Query: 410  ARCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRLD 469
             +       L D +   +    G     +              DG+      A ++ +  
Sbjct: 1023 KKFPDLLRWLTDFLGPPTAGQVGAGGGVI--------------DGLP---LAATQRQQQQ 1065

Query: 470  KSVAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTE 529
            +     N +   + S + S D      +Q++DLS C+R   SY  LP++ +    S RT 
Sbjct: 1066 QQQGGSNSE---RASSHQSTDY-----VQDVDLSLCKRLGASYCALPQSSVPKKCSGRTA 1117

Query: 530  LGAEVLNDHWVSV-TSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVE 588
            L  EVLND WVS  T  SED +F   RK Q+EE+++R ED+RFELD+++E  + T + +E
Sbjct: 1118 LCREVLNDKWVSFPTWASEDSTFVTSRKTQFEETIYRTEDERFELDLVIEVNSATIRVLE 1177

Query: 589  ELLEKINNNTIKTDGPIRVEDHF----TALNLRCIERLYGDHGLDVMDVLRKNASLALPV 644
             + +K++  + +      ++DH       ++ R I R+YGD   +++  ++KN S+A+P+
Sbjct: 1178 NVQKKMSRMSPEDLAKYHLDDHLGGTSQTIHQRAIHRIYGDKSGEIIQGMKKNPSVAVPI 1237

Query: 645  ILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIK 704
            +L RLK K+EEW   + +FNK W E   K Y KSLDH++  FK  D K+L +K+L  EI+
Sbjct: 1238 VLKRLKVKEEEWRDAQKNFNKQWREQNEKYYLKSLDHQAINFKPNDMKALRSKSLFNEIE 1297

Query: 705  EISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLI 749
             + +++  +DD  +  A        PHL   Y D  I +D   L+
Sbjct: 1298 TLYDERHDQDDDPMEPAG-------PHLVLPYKDKTILDDAANLL 1335



 Score = 93.2 bits (230), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 44/97 (45%), Positives = 60/97 (61%), Gaps = 9/97 (9%)

Query: 42  KLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLI 101
           +L   DAL+YL  VK  + D+ + Y++FL++MK+FK+  IDT GVI RV  LFKGH +LI
Sbjct: 280 RLKVEDALSYLDQVKYQYADQPQIYNNFLDIMKEFKSHCIDTPGVIERVSTLFKGHTELI 339

Query: 102 LGFNTFLPKGYEI---------TLPLEDEQPPPKKPV 129
            GFN FLP GY+I         ++P+     PP  P 
Sbjct: 340 YGFNMFLPPGYKIEIHSDALGCSVPVVSMPSPPGAPT 376



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/120 (40%), Positives = 61/120 (50%), Gaps = 23/120 (19%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI----------------- 169
           +PVEF  AI +VNKIK RFQ     YK FL+IL+ Y+KE K +                 
Sbjct: 588 QPVEFNHAITYVNKIKNRFQSQPAKYKKFLEILHAYQKEQKVMKEGSGANSGLNPGKMLT 647

Query: 170 -TEVYQEVEALFQDHPDLLEEFTHFLPDS----SGAASIHYVPSGRNSILRDRSSAMPTA 224
             EVY +V  LF    DLL EF  FLPD+    S AA+  Y+ S  +S L +     PTA
Sbjct: 648 EQEVYTQVAKLFGQDEDLLREFGQFLPDATNHQSSAAAAQYM-SKSSSALHNDHHNKPTA 706



 Score = 47.0 bits (110), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 18/67 (26%), Positives = 39/67 (58%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           ++ E+A+++++++K ++     +Y +FLDI+  ++        V + V  LF+ H +L+ 
Sbjct: 281 LKVEDALSYLDQVKYQYADQPQIYNNFLDIMKEFKSHCIDTPGVIERVSTLFKGHTELIY 340

Query: 189 EFTHFLP 195
            F  FLP
Sbjct: 341 GFNMFLP 347


>gi|195383820|ref|XP_002050623.1| GJ20103 [Drosophila virilis]
 gi|194145420|gb|EDW61816.1| GJ20103 [Drosophila virilis]
          Length = 2173

 Score =  182 bits (461), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 128/411 (31%), Positives = 199/411 (48%), Gaps = 69/411 (16%)

Query: 354  SFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLA- 410
            +F +KV+  LR    Y  FLRCL L+ +EI++++EL  LV   L ++PDL+  F  FL  
Sbjct: 956  AFFDKVRKALRSPEVYDNFLRCLTLFNQEIVSKTELLGLVSPFLMKFPDLLRWFTDFLGP 1015

Query: 411  -------RCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAR 463
                           L D +   +   +G    S      +R    +  D V+D D    
Sbjct: 1016 PMSGQVGGSAGGAGGLIDGLPLAATQRQGSNSSS-----HERASSHQSTDYVQDVDLSLC 1070

Query: 464  EKDRLDKSVAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPS 523
            +  RL  S   + +   PK                        +C               
Sbjct: 1071 K--RLGASYCALPQSTVPK------------------------KC--------------- 1089

Query: 524  ASQRTELGAEVLNDHWVSV-TSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNV 582
             S RT L  EVLND WVS  T  SED +F   RK Q+EE+++R ED+RFELD+++E  + 
Sbjct: 1090 -SGRTALCREVLNDKWVSFPTWASEDSTFVTSRKTQFEETIYRTEDERFELDLVIEVNSA 1148

Query: 583  TTKRVEELLEKINNNTIKTDGPIRVEDHF----TALNLRCIERLYGDHGLDVMDVLRKNA 638
            T + +E + +K++  + +      ++DH       ++ R I R+YGD   +++  ++KN 
Sbjct: 1149 TIRVLENVQKKMSRMSPEELAKYHLDDHLGGTSQTIHQRAIHRIYGDKSGEIIQGMKKNP 1208

Query: 639  SLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKA 698
            S+A+P++L RLK K+EEW   + +FNK W E   K Y KSLDH++  FK  D K+L +K+
Sbjct: 1209 SVAVPIVLKRLKVKEEEWRDAQKNFNKQWREQNEKYYLKSLDHQAINFKPNDMKALRSKS 1268

Query: 699  LSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLI 749
            L  EI+ + +++  +DD  +  A G      PHL   Y D  I +D   L+
Sbjct: 1269 LFNEIETLYDERHDQDDDAME-ATG------PHLVLPYKDKTILDDAANLL 1312



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 45/99 (45%), Positives = 61/99 (61%), Gaps = 9/99 (9%)

Query: 39  GAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHR 98
            A +L   DAL+YL  VK  + D+ + Y++FL++MK+FK+  IDT GVI RV  LFKGH 
Sbjct: 262 AAPRLKVEDALSYLDQVKYQYSDQPQIYNNFLDIMKEFKSHCIDTPGVIERVSTLFKGHT 321

Query: 99  DLILGFNTFLPKGYEI---------TLPLEDEQPPPKKP 128
           +LI GFN FLP GY+I         ++P+     PP  P
Sbjct: 322 ELIYGFNMFLPPGYKIEIHSDALGCSVPVVSMPSPPGAP 360



 Score = 73.2 bits (178), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 39/89 (43%), Positives = 48/89 (53%), Gaps = 17/89 (19%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI----------------- 169
           +PVEF  AI +VNKIK RFQ     YK FL+IL+ Y+KE K +                 
Sbjct: 564 QPVEFNHAITYVNKIKNRFQSQPAKYKKFLEILHAYQKEQKVMKEGSTGSGLNQGKMLTE 623

Query: 170 TEVYQEVEALFQDHPDLLEEFTHFLPDSS 198
            EVY +V  LF    DLL EF  FLPD++
Sbjct: 624 QEVYTQVAKLFGQDEDLLREFGQFLPDAT 652



 Score = 47.4 bits (111), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 18/67 (26%), Positives = 39/67 (58%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           ++ E+A+++++++K ++     +Y +FLDI+  ++        V + V  LF+ H +L+ 
Sbjct: 266 LKVEDALSYLDQVKYQYSDQPQIYNNFLDIMKEFKSHCIDTPGVIERVSTLFKGHTELIY 325

Query: 189 EFTHFLP 195
            F  FLP
Sbjct: 326 GFNMFLP 332


>gi|312070480|ref|XP_003138166.1| hypothetical protein LOAG_02581 [Loa loa]
 gi|307766676|gb|EFO25910.1| hypothetical protein LOAG_02581 [Loa loa]
          Length = 1255

 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 186/709 (26%), Positives = 312/709 (44%), Gaps = 161/709 (22%)

Query: 113 EITLPLEDEQPPPKKPVEF---------EEAINFVNKIKTRFQGDDHVYKSFLDILNMYR 163
           E+TL   D QP   +P+ F         + A+ + NK+  RF+    +Y  FL+IL    
Sbjct: 217 ELTLTATDPQPSTVRPIAFLSRVTTATYQGAVMYRNKVMARFEDRPEIYHKFLEILQRLH 276

Query: 164 K--ENKSITEVY----QEVEALFQDHPDLLEEF-THFLPDSSGAASIHYVPSGRNSI-LR 215
           +  +   + + Y    + V+ LF++  DL++EF   F P SSG     Y  S  +SI LR
Sbjct: 277 RVTQEGGVIQGYKRAVEAVQVLFENDVDLVQEFKQQFQPSSSG-----YGTSSLSSIALR 331

Query: 216 DRSSAMPTARQVHVDKKERAMASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERR 275
           D ++            KER   S  +R+  V  P P      +   K Q  +G       
Sbjct: 332 DTTT------------KERIQKS-GERNTFVVSPQP------VCVPKVQNLQGMS----- 367

Query: 276 DDHRRERERDDRDFENDVNRDFSMQRFPHKRKSARKIEDSTAEPLHQGGEGDENFGMHPV 335
                                      P KR ++  I  +TA    + G       ++ +
Sbjct: 368 ---------------------------PGKRTAS--IYSTTAAKRAKLG------CINML 392

Query: 336 SSSYDDKNAMKSMFSQELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGD 393
           +   + + A+K    ++  F +KV+  L D+  ++ FLRCL LY + II+++EL  L+  
Sbjct: 393 TYDTNVEEAVKFGTVEDYLFFDKVRKALIDNGVHENFLRCLALYNQSIISKNELVELLTP 452

Query: 394 LLGRYPDLMDGFNGFLARCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDD 453
            +GR+  L+      L         L DV                         D +++D
Sbjct: 453 FIGRFTLLLKHVKELLG--------LPDVHG-----------------------DSQQND 481

Query: 454 GVKDRDREAREKDRLDKSVAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYR 513
             K R R+A+  D ++                             ++D + C R   SYR
Sbjct: 482 D-KHRRRQAQMNDNVELE--------------------------HKIDYATCRRLGVSYR 514

Query: 514 LLPKNYLIPSASQRTELGAEVLNDHWVSVTS-GSEDYSFKHMRKNQYEESLFRCEDDRFE 572
            LP++Y  P  S RT L   VLND WVS     SED S  H +K Q+EE +FR ED+R+E
Sbjct: 515 SLPESYEKPLCSGRTPLCESVLNDSWVSFPCWSSEDSSAVHSKKTQFEEFVFRTEDERYE 574

Query: 573 LDMLLESVNVTTKRVEELLEK----INNNTIKTD--GPIRVEDHFTALNLRCIERLYGDH 626
           LD+++E VN T   V E++++    + ++ +K+   GP  +     ++ LR ++R+YGDH
Sbjct: 575 LDIVIE-VNKTALEVLEMVQRKMLRMKSDELKSFRLGP-SLGGSSDSIMLRALQRIYGDH 632

Query: 627 GLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYF 686
            L +++   KN  + +P ++ R++QK  EW + +   N++W E   K+Y KSLDH++  F
Sbjct: 633 TLKMLEGAMKNPHVMIPRLIERMRQKDIEWRKNQEVCNRIWREETEKHYAKSLDHQAVVF 692

Query: 687 KQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEFEY-SDPDIHEDL 745
           KQ D K L AK + ++ + + +++   +D       G      PH  + Y  D  +  D+
Sbjct: 693 KQNDLKLLRAKTIVSQFENLYDERADRND------EGESMEYGPHCIYSYPEDTRVLYDV 746

Query: 746 YQLIKYSCGEMCTTEQLDK--VMKIWTTFLEPMLGVPSRPQGAEDTEDV 792
             L+ +        ++ +K    +    F+  +  +P  PQ   D E+V
Sbjct: 747 NDLVIHYVKRQANIQKEEKRHAKRYLKRFVPELFNIP--PQDLSDEEEV 793



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 41/79 (51%), Positives = 55/79 (69%)

Query: 38  GGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGH 97
           G  ++L   DAL YL  VK  F D  + Y +FL+VMKDFK+Q IDT GVI RV  LF+G 
Sbjct: 57  GNVRRLRVEDALCYLDQVKQQFADAPDVYVNFLDVMKDFKSQAIDTPGVIKRVSRLFRGR 116

Query: 98  RDLILGFNTFLPKGYEITL 116
            +LI+ FNTFLP G+++++
Sbjct: 117 PNLIVAFNTFLPPGFDVSV 135



 Score = 47.0 bits (110), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 33/129 (25%), Positives = 61/129 (47%), Gaps = 10/129 (7%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           +  E+A+ +++++K +F     VY +FLD++  ++ +      V + V  LF+  P+L+ 
Sbjct: 62  LRVEDALCYLDQVKQQFADAPDVYVNFLDVMKDFKSQAIDTPGVIKRVSRLFRGRPNLIV 121

Query: 189 EFTHFLP---DSS--GAASIHYVPSGRNSILRDRSSAMPTARQVHVDKKERAMASHADRD 243
            F  FLP   D S  G   I   P+GR  ++ +    + +      +  E A +S   R 
Sbjct: 122 AFNTFLPPGFDVSVDGIKVIITEPNGRRQVINENHPELSSP-----EAPEAAQSSQMTRA 176

Query: 244 LSVDRPDPD 252
           +S   P  D
Sbjct: 177 ISSVEPLAD 185


>gi|397643704|gb|EJK76030.1| hypothetical protein THAOC_02229 [Thalassiosira oceanica]
          Length = 1477

 Score =  181 bits (460), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 111/350 (31%), Positives = 183/350 (52%), Gaps = 61/350 (17%)

Query: 490  DKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSED- 548
            D + + P+ E+D S C +C+PSYR LP++Y  P  S+R+    +VLND WVS+  GSE+ 
Sbjct: 770  DSWHSVPLTEIDFSRCRKCSPSYRALPRDYPDPPCSERSVAETKVLNDIWVSLPVGSEES 829

Query: 549  YSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKIN------------N 596
            Y+F+HMRKNQ+EE+LFR ED RFE+DM L+S   T +R+  + +++             +
Sbjct: 830  YTFRHMRKNQFEETLFRLEDMRFEIDMCLDSNATTLQRLTMIYDELQFLSESEISASGSS 889

Query: 597  NTIKT--DGP-IRVEDHFTALNLR--------CIERLYGDHGLDVMDVLRKNASLALPVI 645
            + IK+  DG  +  + +  AL+ R         I R+YGD G +++D+  KN ++A+P++
Sbjct: 890  SFIKSQRDGAGLGGKIYQYALDGRVLGIIHKHAIRRIYGDEGQEMLDLCYKNPAVAIPIV 949

Query: 646  LTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKE 705
            + RL+QK  E+   RS  N+ W ++   NY+KSLDHRS  ++  D ++   + + AEIK+
Sbjct: 950  VNRLRQKDAEFREARSQLNRKWKDLTELNYYKSLDHRSITWRTTDKRATSTRTIVAEIKD 1009

Query: 706  IS---------------EKKRKEDDVLLAIAAGNRRS------------------IVPHL 732
             +               EK ++E      +  G   S                    PH+
Sbjct: 1010 RAANDGCEGDAALNARMEKAKEEHGTFYEVTMGCSDSFSGKQTDLSNLPKPTPTIFTPHM 1069

Query: 733  EFEY-SDPDIHEDLYQLIKYSCGEMCTTEQLDK--VMKIWTTFLEPMLGV 779
             F Y  +    +D + LI ++  E  +T  +DK    ++W  F+    G+
Sbjct: 1070 SFFYDGNSWAQKDAFHLISFAL-EKGSTNTVDKERCARLWRQFVGQWFGL 1118



 Score = 92.8 bits (229), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 42/78 (53%), Positives = 57/78 (73%)

Query: 39  GAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHR 98
             ++L   DAL YL  VK+ F ++   Y++FL++MK FKAQ +DT GVI RVK LF+G+ 
Sbjct: 305 AGRELKVEDALLYLDEVKNEFGERPRIYNEFLDIMKCFKAQEVDTIGVINRVKTLFRGYN 364

Query: 99  DLILGFNTFLPKGYEITL 116
            LILGFNTFLP+GY+I +
Sbjct: 365 KLILGFNTFLPEGYKIEM 382



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 38/71 (53%), Positives = 49/71 (69%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDL 186
           K VEF+ AI +V  IK RF      Y +FL+IL+ Y+KE + I EV ++V +LF DHPDL
Sbjct: 526 KTVEFDHAIMYVTNIKKRFASQPRTYHTFLEILHTYQKEQRGIKEVLEQVSSLFADHPDL 585

Query: 187 LEEFTHFLPDS 197
           L EFT FLPD+
Sbjct: 586 LREFTFFLPDA 596



 Score = 43.1 bits (100), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 19/73 (26%), Positives = 39/73 (53%)

Query: 124 PPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDH 183
           P  + ++ E+A+ +++++K  F     +Y  FLDI+  ++ +      V   V+ LF+ +
Sbjct: 304 PAGRELKVEDALLYLDEVKNEFGERPRIYNEFLDIMKCFKAQEVDTIGVINRVKTLFRGY 363

Query: 184 PDLLEEFTHFLPD 196
             L+  F  FLP+
Sbjct: 364 NKLILGFNTFLPE 376



 Score = 42.0 bits (97), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 19/62 (30%), Positives = 32/62 (51%)

Query: 48  ALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTF 107
           A+ Y+  +K  F  +   Y  FLE++  ++ ++     V+ +V  LF  H DL+  F  F
Sbjct: 533 AIMYVTNIKKRFASQPRTYHTFLEILHTYQKEQRGIKEVLEQVSSLFADHPDLLREFTFF 592

Query: 108 LP 109
           LP
Sbjct: 593 LP 594


>gi|298713557|emb|CBJ27085.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 1221

 Score =  181 bits (460), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 103/266 (38%), Positives = 148/266 (55%), Gaps = 37/266 (13%)

Query: 497 IQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDY-SFKHMR 555
           + E++  + + CTPSYR LP++Y + S S R+     VLND WVSV  GSED  SFKHMR
Sbjct: 516 LSEINFQSAKMCTPSYRELPQDYQVTSCSGRSPNEDAVLNDTWVSVPVGSEDSGSFKHMR 575

Query: 556 KNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKIN-------------------- 595
           +N  EE LF+ ED+RFELDML++ V     R+E   E+I                     
Sbjct: 576 RNPNEEQLFKVEDERFELDMLIDGVASAIARLEPAEEEIEALRATAGSALGQNAAPAATS 635

Query: 596 ----NNTIKTDGPIRVEDHFT---------ALNLRCIERLYGDHGLDVMDVLRKNASLAL 642
               ++    DG   V   F          AL+L  I RLYGDHG +V+D+LRKN ++A+
Sbjct: 636 REGASSISGPDGGDVVLPQFQYRLDRRTLGALHLSTISRLYGDHGPEVVDLLRKNPAVAI 695

Query: 643 PVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAE 702
           PV+L RL+ K+EEW   R +    W E+  K++H+SLDHRS+ F+++D +    +AL   
Sbjct: 696 PVVLKRLRLKEEEWCVAREEAKGGWKELAQKHFHRSLDHRSYNFRREDKRHTSNRAL--- 752

Query: 703 IKEISEKKRKEDDVLLAIAAGNRRSI 728
           ++EI ++K  ED    A+    R  +
Sbjct: 753 LQEIKDRKVDEDPQKAAVVKAAREKV 778



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 71/196 (36%), Positives = 103/196 (52%), Gaps = 41/196 (20%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
           LT NDA+ YL AVK  F+ + E YD+FL +M  FK +++    VI  V  LF+G   L+L
Sbjct: 40  LTVNDAMDYLDAVKLEFRHQPEIYDEFLAIMGRFKTKQMLPPDVIVEVARLFRGRNSLVL 99

Query: 103 GFNTFLPKGYEI----------------------TLPLE---------------DEQPPP 125
            FN FLP+G++I                      T P                 +E  P 
Sbjct: 100 RFNRFLPEGFKIEPDDIQRMEDEECAAKEENAGGTAPGHAAGDGDRSVMSVQSGEESDPE 159

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENK----SITEVYQEVEALFQ 181
           ++ +EF+ AI++V  IK RF  D   YK+FL+IL+ Y+++ +     I  V +++  LF 
Sbjct: 160 ERAMEFDHAIHYVTTIKRRFSDDVGTYKAFLEILHTYQRQQQDTHSGINHVLEQITDLFA 219

Query: 182 DHPDLLEEFTHFLPDS 197
           D PDLL EFT+FLPD+
Sbjct: 220 DEPDLLREFTYFLPDT 235



 Score = 44.7 bits (104), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 9/99 (9%)

Query: 337 SSYDDKNAMKSMFSQELSFCEKVKDKLRD-----DYQEFLRCLHLYTKEIITRSELQSLV 391
           SS D +  +K+  + +L   ++ +D L       D+ EFL+CL L++ EI+ R EL  +V
Sbjct: 420 SSMDSQGTIKTSPANQL--FDQARDVLSSSGDDTDWTEFLKCLDLFSNEILGRDELLDMV 477

Query: 392 GDLLGRYP--DLMDGFNGFLARCEKSEELLADVMSKKSL 428
            DL   +   DLMD F   + R  K E    D M    L
Sbjct: 478 QDLFEAHDGFDLMDEFKDLVYRRGKLEPPPRDAMPTLGL 516


>gi|426230332|ref|XP_004009228.1| PREDICTED: LOW QUALITY PROTEIN: paired amphipathic helix protein
           Sin3b [Ovis aries]
          Length = 1002

 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 105/265 (39%), Positives = 152/265 (57%), Gaps = 18/265 (6%)

Query: 498 QELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKN 557
           +E+D ++C+R   SYR LPK Y  P  S RT +  EVLND WVS  S SED +F   +K 
Sbjct: 313 REIDYASCKRIGSSYRALPKTYQQPRCSGRTAICKEVLNDTWVSFPSWSEDSTFVSSKKT 372

Query: 558 QYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TA 613
            YEE L RCED+RFELD++LE+   T + +E + +K++    +     R++D        
Sbjct: 373 PYEEQLHRCEDERFELDVVLETNLATIRVLESVQKKLSRMAPEDQEKFRLDDCLGGTSEV 432

Query: 614 LNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSK 673
           +  R I R+YGD   ++++ L+KN   A+PV+L RLK K+EEW   +  FNK+W E Y K
Sbjct: 433 IQRRAIHRIYGDKAPEIIESLKKNPVTAVPVVLKRLKAKEEEWREAQQGFNKIWREQYEK 492

Query: 674 NYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIV--PH 731
            Y KSLDH++  FKQ D+K+L +K+L  EI+ + ++ + +        +G R +    PH
Sbjct: 493 AYLKSLDHQAVNFKQNDTKALRSKSLLNEIESVYDEHQGQH-------SGGRSAPPREPH 545

Query: 732 LEF-----EYSDPDIHEDLYQLIKY 751
             F      Y D  I ED   LI Y
Sbjct: 546 PTFGDGGSVYEDRQILEDAAALISY 570



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 66/163 (40%), Positives = 82/163 (50%), Gaps = 45/163 (27%)

Query: 80  RIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLP----LEDEQP------------ 123
           RIDT GVI RV +LF  H DLI+GFN FLP GY I +P    L  + P            
Sbjct: 2   RIDTPGVIRRVSQLFHEHPDLIVGFNAFLPLGYRIDIPKNSKLNIQSPLSSQENSHNHSD 61

Query: 124 --------------PPKKP-----VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRK 164
                          P+ P     VEF  AI++VNKIKTRF     +Y+SFL+IL+ Y+K
Sbjct: 62  CAENVKQQMLCKEDKPQVPLESDSVEFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQK 121

Query: 165 ENKSIT----------EVYQEVEALFQDHPDLLEEFTHFLPDS 197
           E  S            EV+ EV  LF+   DLL EF  FLP++
Sbjct: 122 EQLSTKGRPFRGMSEEEVFTEVANLFRGQEDLLSEFGQFLPEA 164



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 40/62 (64%), Gaps = 2/62 (3%)

Query: 351 QELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGF 408
           QE SF +KV+  L+    Y+ FLRC+ L+ +E+++ SEL  LVG  LG++P+L   F  F
Sbjct: 232 QEFSFFDKVRRVLKSQEVYENFLRCIALFNQELVSGSELLQLVGPFLGKFPELFAQFKSF 291

Query: 409 LA 410
           L 
Sbjct: 292 LG 293



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/218 (22%), Positives = 84/218 (38%), Gaps = 61/218 (27%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAG----------VIARVKELFK 95
           N+A++Y+  +K  F D  E Y  FLE++  ++ +++ T G          V   V  LF+
Sbjct: 89  NNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLSTKGRPFRGMSEEEVFTEVANLFR 148

Query: 96  GHRDLILGFNTFLPKG--------------------YEITLP----------LEDEQPPP 125
           G  DL+  F  FLP+                     +E  L           L     P 
Sbjct: 149 GQEDLLSEFGQFLPEAKRSLFTGNGPCEMSSVHKSEHEKNLEHSKKRSRPSLLRPVSAPA 208

Query: 126 KKPVEFE----------------EAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI 169
           KK ++                  +  +F +K++ R      VY++FL  + ++ +E  S 
Sbjct: 209 KKKMKLRGTKDLSIATVGKYGTLQEFSFFDKVR-RVLKSQEVYENFLRCIALFNQELVSG 267

Query: 170 TEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVP 207
           +E+ Q V       P+L  +F  FL    G   + + P
Sbjct: 268 SELLQLVGPFLGKFPELFAQFKSFL----GVKELSFAP 301


>gi|348526616|ref|XP_003450815.1| PREDICTED: paired amphipathic helix protein Sin3a-like [Oreochromis
           niloticus]
          Length = 1293

 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 101/285 (35%), Positives = 163/285 (57%), Gaps = 10/285 (3%)

Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQ 558
           E+D S+C++   SYR LPK++  P  + RT L  EVLND WVS  S SED +F   +K Q
Sbjct: 567 EIDYSSCKKLGSSYRALPKSFQQPKCTGRTPLCREVLNDTWVSFPSWSEDSTFVSSKKTQ 626

Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TAL 614
           YEE ++RCED+RFELD++LE+   T + +E +  +++  + +     ++++        +
Sbjct: 627 YEEHIYRCEDERFELDIVLETNLATIRALETVQRRLSRMSAEEQLRFKLDNTMGGSSEVI 686

Query: 615 NLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKN 674
           + + I+R+YGD   D+++ L+KN ++++P++L RLK K EEW   +  FNK+W E   K 
Sbjct: 687 HRKAIQRIYGDKAQDIIEGLKKNPAVSVPIVLKRLKMKDEEWREAQRGFNKIWREQNEKY 746

Query: 675 YHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEF 734
           Y KSLDH+   FKQ D+K L +K L  EI+ + +++++      A    N     PH+  
Sbjct: 747 YLKSLDHQGINFKQNDTKVLRSKTLLNEIEMLYDERQERASEESATPPPNG----PHMTL 802

Query: 735 EYSDPDIHEDLYQLIKYSCGEMCTTEQLD--KVMKIWTTFLEPML 777
            Y D  I ED   LI +        ++ D  K+ +I   F+  +L
Sbjct: 803 TYDDSQILEDAASLIIHHVKRQVGIQKEDKCKIKQIIHHFIPDLL 847



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 46/80 (57%), Positives = 60/80 (75%)

Query: 41  QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDL 100
           Q+L   DAL+YL  VK  F ++ + Y+DFL++MK+FK+Q IDT GVI RV +LFKGH DL
Sbjct: 124 QRLKVEDALSYLDQVKLQFGNQPQVYNDFLDIMKEFKSQSIDTPGVINRVSQLFKGHPDL 183

Query: 101 ILGFNTFLPKGYEITLPLED 120
           I+GFNTFLP GY+I +   D
Sbjct: 184 IMGFNTFLPPGYKIEVQTND 203



 Score = 99.4 bits (246), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 92/298 (30%), Positives = 132/298 (44%), Gaps = 70/298 (23%)

Query: 124 PP---KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALF 180
           PP    +PVEF  AIN+VNKIK RFQG   +YK+FL+IL+ Y+KE ++  E         
Sbjct: 312 PPIQNNQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKE--------- 362

Query: 181 QDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQVHVDKKERAMASHA 240
                               A  +Y P+     L ++      AR   + K +  + S  
Sbjct: 363 --------------------AGGNYTPA-----LTEQEVYTQVAR---LFKNQEDLLSEF 394

Query: 241 DRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERRDDHRRERERDDRDFENDVNRDFSMQ 300
            + L    PD +   +L K+  D      +    R+DH    +R    F N+  R  S  
Sbjct: 395 GQFL----PDANSSALLSKTTPD------RAESVRNDHGGTVKRH---FLNNKQR-LSQN 440

Query: 301 RFPHKRKSARKIEDSTAEPLHQGGE-GDENFGMHPVSSSYDDKNAMKSMFSQELSFCEKV 359
             P +R S       T  P+ +  +   ++ GM  VS         K   S E  F EKV
Sbjct: 441 GLPIRRPSGV----GTTPPVKKKPKITGKDHGMSDVS---------KHSTSTETMFFEKV 487

Query: 360 KDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLARCEKS 415
           K  LR  + Y  FLRCLH++ +E+I+R+EL  LV   LG++P+L   F  FL   E S
Sbjct: 488 KKALRSSEAYDNFLRCLHIFNQEVISRTELVQLVIPFLGKFPELFTWFKNFLGYRESS 545



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 64/319 (20%), Positives = 113/319 (35%), Gaps = 66/319 (20%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           ++ E+A+++++++K +F     VY  FLDI+  ++ ++     V   V  LF+ HPDL+ 
Sbjct: 126 LKVEDALSYLDQVKLQFGNQPQVYNDFLDIMKEFKSQSIDTPGVINRVSQLFKGHPDLIM 185

Query: 189 EFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQVHVDKKERAMASHADRDLSVDR 248
            F  FLP           P  +  +  +    + T  Q+H          +     +  +
Sbjct: 186 GFNTFLP-----------PGYKIEVQTNDLVNVTTPNQIHYITPHGVSVQNIPASGAPSQ 234

Query: 249 PDPDHDRVLLKSDKDQRRRGEKERERRDDHRRERERDDRDFENDVNRDFSMQRFPHKRKS 308
           P P H                        H+ +                  Q  P   K+
Sbjct: 235 PAPSH------------------------HQHQSLPQTGSLTTTTQPLIPAQ--PAPNKT 268

Query: 309 ARKIEDSTAEPLHQGGEGDENFG---------MHPVSSSYDD----KNAMKSMFSQELSF 355
           ++ I+     P  Q      ++            PVSS+       +N     F+  +++
Sbjct: 269 SKPIQSPAHTPTSQPNPSIPSYASPRSPSVQSHTPVSSTPSSGPPIQNNQPVEFNHAINY 328

Query: 356 CEKVKDKLR---DDYQEFLRCLHLYTKE-------------IITRSELQSLVGDLLGRYP 399
             K+K++ +   D Y+ FL  LH Y KE              +T  E+ + V  L     
Sbjct: 329 VNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVYTQVARLFKNQE 388

Query: 400 DLMDGFNGFLARCEKSEEL 418
           DL+  F  FL     S  L
Sbjct: 389 DLLSEFGQFLPDANSSALL 407


>gi|321461536|gb|EFX72567.1| hypothetical protein DAPPUDRAFT_200975 [Daphnia pulex]
          Length = 1217

 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 125/396 (31%), Positives = 192/396 (48%), Gaps = 79/396 (19%)

Query: 352 ELSFCEKVKD---KLRDDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGF 408
           EL+F +KV+    + RD Y+ FLRCL +Y +EII++ EL  +                 F
Sbjct: 364 ELAFFDKVRRVACRSRDVYENFLRCLVMYNQEIISKMELLQIT--------------TPF 409

Query: 409 LARCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRL 468
           L+R     +   D +  K ++   +                   DG + RD + +     
Sbjct: 410 LSRHPDLLKWFKDFLGLKEMYPSTK-------------------DGKESRDHDMQA---- 446

Query: 469 DKSVAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRT 528
                                         E+D S C+R   SY  LPK+Y  P  S RT
Sbjct: 447 -----------------------------MEIDYSTCKRLGTSYCALPKSYEPPKCSGRT 477

Query: 529 ELGAEVLNDHWVSV-TSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRV 587
            L  EVLN+ WVS  T  SED +F   RK QYEE ++R ED+R+ELD++LE+   T + +
Sbjct: 478 PLCKEVLNETWVSFPTWSSEDSTFVSSRKTQYEEYIYRTEDERYELDIVLETHMSTIRVL 537

Query: 588 EELLEKINN-------NTIKTDGPIRVEDHFTALNLRCIERLYGDHGLDVMDVLRKNASL 640
           E +L+K+N+       N  K D  +        +++R I R+YGD   ++++ L+++  +
Sbjct: 538 EGVLKKLNHRMNAEEANRFKLDDCLGGSS--PTIHIRAIRRIYGDKATEIIEGLKRSPQV 595

Query: 641 ALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALS 700
           A+PV+L R+K K+EEW   +  FNK+W +   K Y KSLDH    FKQ D K+L +KAL 
Sbjct: 596 AIPVVLRRMKAKEEEWREAQKGFNKIWRDQNEKYYLKSLDHLGTNFKQNDVKALRSKALI 655

Query: 701 AEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEFEY 736
            EI+ + E++ +E+     +      S  PHL+  Y
Sbjct: 656 NEIETLFEERNEENANKTDMGRSTNASSGPHLKLVY 691



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 46/81 (56%), Positives = 60/81 (74%)

Query: 34  GGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKEL 93
           G G    Q+L   DAL+YL  VK  F ++ + Y+DFL++MK+FK+Q IDT GVIARV  L
Sbjct: 7   GPGAQQFQRLKVEDALSYLDQVKYKFGNQPQVYNDFLDIMKEFKSQSIDTPGVIARVSSL 66

Query: 94  FKGHRDLILGFNTFLPKGYEI 114
           F+GH +LI+GFNTFLP GY+I
Sbjct: 67  FRGHPELIVGFNTFLPPGYKI 87



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 43/97 (44%), Positives = 58/97 (59%), Gaps = 16/97 (16%)

Query: 123 PPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI------------- 169
           P   +PVEF  AIN+VNKIK RFQG   +YK FL+IL+ Y+KE +S+             
Sbjct: 194 PNASQPVEFNHAINYVNKIKNRFQGQPDIYKQFLEILHTYQKEQRSLKEGLVSPLNYRPT 253

Query: 170 ---TEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASI 203
               EVY +V  LFQ+  DLL+EF  FLPD++  + +
Sbjct: 254 LTEAEVYAKVAQLFQNQEDLLQEFGQFLPDATNPSPV 290



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 61/243 (25%), Positives = 89/243 (36%), Gaps = 75/243 (30%)

Query: 27  GQTQVVGGGGG--GGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDF-KAQR--- 80
           G   VV    G    +Q +  N A+ Y+  +K+ FQ + + Y  FLE++  + K QR   
Sbjct: 182 GAAAVVNAAFGVPNASQPVEFNHAINYVNKIKNRFQGQPDIYKQFLEILHTYQKEQRSLK 241

Query: 81  ------------IDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLEDEQ------ 122
                       +  A V A+V +LF+   DL+  F  FLP     +   E  +      
Sbjct: 242 EGLVSPLNYRPTLTEAEVYAKVAQLFQNQEDLLQEFGQFLPDATNPSPVTETSKPPVLAS 301

Query: 123 ---------PPPKKPVE----------FEEAINFVNKIKTRF---QGDDH---------- 150
                    PPPK P++              +N + K K R     G D+          
Sbjct: 302 SNLTGSSVAPPPKAPLKRPAPPPIISSPTVGMNLIPKKKPRLDPGSGKDNSIAEIGKFGT 361

Query: 151 -------------------VYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFT 191
                              VY++FL  L MY +E  S  E+ Q        HPDLL+ F 
Sbjct: 362 MNELAFFDKVRRVACRSRDVYENFLRCLVMYNQEIISKMELLQITTPFLSRHPDLLKWFK 421

Query: 192 HFL 194
            FL
Sbjct: 422 DFL 424



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 41/67 (61%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           ++ E+A+++++++K +F     VY  FLDI+  ++ ++     V   V +LF+ HP+L+ 
Sbjct: 16  LKVEDALSYLDQVKYKFGNQPQVYNDFLDIMKEFKSQSIDTPGVIARVSSLFRGHPELIV 75

Query: 189 EFTHFLP 195
            F  FLP
Sbjct: 76  GFNTFLP 82


>gi|391347705|ref|XP_003748096.1| PREDICTED: paired amphipathic helix protein Sin3a-like [Metaseiulus
           occidentalis]
          Length = 1091

 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 102/217 (47%), Positives = 129/217 (59%), Gaps = 38/217 (17%)

Query: 20  SSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQ 79
           SS+G P   +    GG GG  Q+L   DAL+YL  VK  F  +   Y+DFL++MK+FK+Q
Sbjct: 34  SSQGAPPSPS----GGQGGQFQRLKVEDALSYLDLVKLKFGSQPHVYNDFLDIMKEFKSQ 89

Query: 80  RIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITL----------------------- 116
            IDT GVI RV  LF+GH +LI+GFNTFLP GY+I L                       
Sbjct: 90  SIDTPGVIQRVSNLFRGHPELIVGFNTFLPPGYKIELQGNEQVNISIPGSNVCHTIHPNG 149

Query: 117 -PLEDEQP--PPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENK------ 167
            P  +  P  PP+ PVEF  AIN+VNKIK RF G   VYK FLDIL+ Y+K+ K      
Sbjct: 150 PPTPNIPPKSPPQAPVEFNHAINYVNKIKNRFAGQPDVYKKFLDILHTYQKDQKSRESSG 209

Query: 168 --SITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAAS 202
             S +EVYQ+V ALF+D  DLL+EF  FLPD++G  +
Sbjct: 210 SLSESEVYQQVAALFEDQDDLLQEFGKFLPDANGGPT 246



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 90/215 (41%), Positives = 135/215 (62%), Gaps = 4/215 (1%)

Query: 498 QELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKN 557
           QE+D + C+R   SYR +PKNY+ P  S RT L  EVLND WVS  S SED +F   +K 
Sbjct: 407 QEIDFTACKRYGASYRGMPKNYVQPKCSGRTNLCREVLNDAWVSFPSWSEDSTFVSSKKT 466

Query: 558 QYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TA 613
           Q+EE ++RCED+RFELD+++E+   T + +E + +KIN  +++     R++D      + 
Sbjct: 467 QFEEHIYRCEDERFELDIVIEANLATIRVLETVQKKINRMSLEERSRFRLDDCLGGTSST 526

Query: 614 LNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSK 673
           ++ R I R+YGD   DV++ L+KN  + + V+L RL+ K+EEW   +  FN +W E   K
Sbjct: 527 IHQRAIRRIYGDKAGDVIEGLKKNPVVVVAVVLKRLRSKEEEWREAQKAFNNIWREQMDK 586

Query: 674 NYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISE 708
            Y +SLDH+   FKQ DSK++ +K L  +I+   E
Sbjct: 587 YYLRSLDHQGMTFKQTDSKTIRSKNLLNDIETAYE 621



 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 2/61 (3%)

Query: 352 ELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFL 409
           E +F EKV+  LR+   Y+ FLRCL+LY +E++++SEL  LV   LG++PDL   F  F+
Sbjct: 329 EYAFFEKVRKALRNPEVYENFLRCLNLYNQEVVSKSELVHLVTPFLGKFPDLFKWFKDFI 388

Query: 410 A 410
            
Sbjct: 389 G 389


>gi|386767818|ref|NP_001246282.1| Sin3A, isoform G [Drosophila melanogaster]
 gi|383302433|gb|AFH08036.1| Sin3A, isoform G [Drosophila melanogaster]
          Length = 2066

 Score =  180 bits (456), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 125/408 (30%), Positives = 196/408 (48%), Gaps = 63/408 (15%)

Query: 354  SFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLAR 411
            +F +KV+  LR    Y  FLRCL L+ +EI++++EL  LV                FL +
Sbjct: 923  AFFDKVRKALRSPEVYDNFLRCLTLFNQEIVSKTELLGLVSP--------------FLMK 968

Query: 412  CEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRLDKS 471
                     D +   S    G +   + +    R      +      DR           
Sbjct: 969  FPDLLRWFTDFLGPPSGQPAGGLIDGMPLAATQRQGGGSSNS---SHDR----------- 1014

Query: 472  VAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELG 531
                            +  +  A+ +Q++DLS+C+R   SY  LP++ +    S RT L 
Sbjct: 1015 ---------------GTSHQSAAEYVQDVDLSSCKRLGASYCALPQSTVPKKCSGRTALC 1059

Query: 532  AEVLNDHWVSV-TSGSEDYSFKHMRKNQYEESLFR----CEDDRFELDMLLESVNVTTKR 586
             EVLND WVS  T  SED +F   RK Q+EE+++R     ED+RFELD+++E  + T + 
Sbjct: 1060 REVLNDKWVSFPTWASEDSTFVTSRKTQFEETIYRNIHRTEDERFELDLVIEVNSATIRV 1119

Query: 587  VEELLEKINNNTIKTDGPIRVEDHFTA----LNLRCIERLYGDHGLDVMDVLRKNASLAL 642
            +E L +K++  + +      ++DH       ++ R I R+YGD   +++  ++KN  +A+
Sbjct: 1120 LENLQKKMSRMSTEELSKFHLDDHLGGTSQTIHQRAIHRIYGDKSGEIITGMKKNPFVAV 1179

Query: 643  PVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAE 702
            P++L RLK K+EEW   +  FNK W E   K Y KSLDH++  FK  D K+L +K+L  E
Sbjct: 1180 PIVLKRLKVKEEEWREAQKTFNKQWREQNEKYYLKSLDHQAINFKPNDMKALRSKSLFNE 1239

Query: 703  IKEI-SEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLI 749
            I+ +  E+  +EDD +            PHL   Y D  I +D   L+
Sbjct: 1240 IETLYDERHDQEDDAMEPFG--------PHLVLPYKDKTILDDAANLL 1279



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 49/114 (42%), Positives = 65/114 (57%), Gaps = 9/114 (7%)

Query: 25  PSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTA 84
           P G T    G  G    +L   DAL+YL  VK  + D+ + Y++FL++MK+FK+  IDT 
Sbjct: 252 PVGGTTPPQGQSGNATPRLKVEDALSYLDQVKYQYADQPQIYNNFLDIMKEFKSHCIDTP 311

Query: 85  GVIARVKELFKGHRDLILGFNTFLPKGYEI---------TLPLEDEQPPPKKPV 129
           GVI RV  LFKGH +LI GFN FLP GY+I         ++P+     PP  P 
Sbjct: 312 GVIERVSTLFKGHTELIYGFNMFLPPGYKIEIHSDALGCSVPVVSMPSPPGAPT 365



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 40/93 (43%), Positives = 51/93 (54%), Gaps = 13/93 (13%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI-------------TEVY 173
           +PVEF  AI +VNKIK RFQ     YK FL+IL+ Y++E K +              EVY
Sbjct: 565 QPVEFNHAITYVNKIKNRFQNQPAKYKKFLEILHDYQREQKVMKEGSLNQGKMLTEQEVY 624

Query: 174 QEVEALFQDHPDLLEEFTHFLPDSSGAASIHYV 206
            +V  LF    DLL EF  FLPD++   S  Y+
Sbjct: 625 TQVAKLFGQDEDLLREFGQFLPDATNHQSGQYM 657



 Score = 48.1 bits (113), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 21/87 (24%), Positives = 46/87 (52%), Gaps = 6/87 (6%)

Query: 115 TLPLEDEQPPPKKP------VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKS 168
           ++P+    PP  +       ++ E+A+++++++K ++     +Y +FLDI+  ++     
Sbjct: 250 SIPVGGTTPPQGQSGNATPRLKVEDALSYLDQVKYQYADQPQIYNNFLDIMKEFKSHCID 309

Query: 169 ITEVYQEVEALFQDHPDLLEEFTHFLP 195
              V + V  LF+ H +L+  F  FLP
Sbjct: 310 TPGVIERVSTLFKGHTELIYGFNMFLP 336



 Score = 43.9 bits (102), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 13/92 (14%)

Query: 31  VVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDF-KAQRIDTAG---- 85
           ++ G  G   Q +  N A+ Y+  +K+ FQ++  KY  FLE++ D+ + Q++   G    
Sbjct: 555 ILLGETGQQNQPVEFNHAITYVNKIKNRFQNQPAKYKKFLEILHDYQREQKVMKEGSLNQ 614

Query: 86  --------VIARVKELFKGHRDLILGFNTFLP 109
                   V  +V +LF    DL+  F  FLP
Sbjct: 615 GKMLTEQEVYTQVAKLFGQDEDLLREFGQFLP 646



 Score = 43.1 bits (100), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 42/91 (46%), Gaps = 15/91 (16%)

Query: 123 PPPKKP------VEFEEAIN--------FVNKIKTRFQGDDHVYKSFLDILNMYRKENKS 168
           PP K+P      V F EA +        F +K++   +  + VY +FL  L ++ +E  S
Sbjct: 896 PPAKRPKPYCRDVSFSEASSKCTISDAAFFDKVRKALRSPE-VYDNFLRCLTLFNQEIVS 954

Query: 169 ITEVYQEVEALFQDHPDLLEEFTHFLPDSSG 199
            TE+   V       PDLL  FT FL   SG
Sbjct: 955 KTELLGLVSPFLMKFPDLLRWFTDFLGPPSG 985


>gi|355755587|gb|EHH59334.1| Transcriptional corepressor Sin3b [Macaca fascicularis]
          Length = 1212

 Score =  180 bits (456), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 93/223 (41%), Positives = 138/223 (61%), Gaps = 4/223 (1%)

Query: 498 QELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKN 557
           +E+D ++C+R   SYR LPK Y  P  S RT +  EVLND WVS  S SED +F   +K 
Sbjct: 493 REIDYASCKRIGSSYRALPKTYQQPKCSGRTAICKEVLNDTWVSFPSWSEDSTFVSSKKT 552

Query: 558 QYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TA 613
            YEE L RCED+RFELD++LE+   T + +E + +K++    +     R++D        
Sbjct: 553 PYEEQLHRCEDERFELDVVLETNLATIRVLESVQKKLSRMAPEDQEKFRLDDSLGGTSEV 612

Query: 614 LNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSK 673
           +  R I R+YGD   ++++ L+KN   A+PV+L RLK K+EEW   +  FNK+W E Y K
Sbjct: 613 IQRRAIYRIYGDKAPEIIESLKKNPVTAVPVVLKRLKAKEEEWREAQQGFNKIWREQYEK 672

Query: 674 NYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDV 716
            Y KSLDH++  FKQ D+K+L +K+L  EI+ + ++K  +  +
Sbjct: 673 AYLKSLDHQAVNFKQNDTKALRSKSLLNEIESVYDEKEDQGTI 715



 Score = 89.7 bits (221), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 47/99 (47%), Positives = 58/99 (58%), Gaps = 4/99 (4%)

Query: 38  GGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGH 97
           G   K    DAL YL  VK  F      Y+ FLE+MK+FK+Q IDT GVI RV +LF  H
Sbjct: 3   GLLAKEMVEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRVSQLFHEH 62

Query: 98  RDLILGFNTFLPKGYEITLP----LEDEQPPPKKPVEFE 132
            DLI+GFN FLP GY I +P    L  + P   +P +F+
Sbjct: 63  PDLIVGFNAFLPLGYRIDIPKNGKLNIQSPLTSQPFDFQ 101



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/104 (38%), Positives = 56/104 (53%), Gaps = 10/104 (9%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKEN----------KSITEVYQEVEA 178
           VEF  AI++VNKIKTRF     +Y+SFL+IL+ Y+KE            S  EV+ EV  
Sbjct: 266 VEFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLNTRGRPFRGMSEEEVFTEVAN 325

Query: 179 LFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMP 222
           LF+   DLL EF  FLP++  +      P   +S+ ++     P
Sbjct: 326 LFRGQEDLLSEFGQFLPEAKRSLFTGNGPCEMHSVQKNEHDKTP 369



 Score = 58.2 bits (139), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 5/79 (6%)

Query: 351 QELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGF 408
           QE SF +KV+  L+    Y+ FLRC+ L+ +E+++ SEL  LV   LG++P+L   F  F
Sbjct: 412 QEFSFFDKVRRVLKSQEVYENFLRCIALFNQELVSGSELLQLVSPFLGKFPELFAQFKSF 471

Query: 409 LARCEKSEELLADVMSKKS 427
           L   E S    A  MS +S
Sbjct: 472 LGVKELS---FAPPMSDRS 487



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 50/218 (22%), Positives = 87/218 (39%), Gaps = 61/218 (27%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAG----------VIARVKELFK 95
           N+A++Y+  +K  F D  E Y  FLE++  ++ ++++T G          V   V  LF+
Sbjct: 269 NNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLNTRGRPFRGMSEEEVFTEVANLFR 328

Query: 96  GHRDLILGFNTFLPKG----YEITLPLE---------DEQP-----------------PP 125
           G  DL+  F  FLP+     +    P E         D+ P                 P 
Sbjct: 329 GQEDLLSEFGQFLPEAKRSLFTGNGPCEMHSVQKNEHDKTPEHSRKRSRPSLLRPVSAPA 388

Query: 126 KKPVEFE----------------EAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI 169
           KK ++                  +  +F +K++ R      VY++FL  + ++ +E  S 
Sbjct: 389 KKKMKLRGTKDLSIAAVGKYGTLQEFSFFDKVR-RVLKSQEVYENFLRCIALFNQELVSG 447

Query: 170 TEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVP 207
           +E+ Q V       P+L  +F  FL    G   + + P
Sbjct: 448 SELLQLVSPFLGKFPELFAQFKSFL----GVKELSFAP 481



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 22/64 (34%), Positives = 38/64 (59%)

Query: 132 EEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFT 191
           E+A+ +++++K RF  D   Y  FL+I+  ++ ++     V + V  LF +HPDL+  F 
Sbjct: 11  EDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRVSQLFHEHPDLIVGFN 70

Query: 192 HFLP 195
            FLP
Sbjct: 71  AFLP 74


>gi|260947412|ref|XP_002618003.1| hypothetical protein CLUG_01462 [Clavispora lusitaniae ATCC 42720]
 gi|238847875|gb|EEQ37339.1| hypothetical protein CLUG_01462 [Clavispora lusitaniae ATCC 42720]
          Length = 1300

 Score =  179 bits (454), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 134/446 (30%), Positives = 195/446 (43%), Gaps = 91/446 (20%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
           L   DAL+YL  VK  F ++ + Y++FL++MKDFK+Q IDT GVI RV  LF+GH +LI 
Sbjct: 54  LNVKDALSYLDQVKIQFFNQADVYNNFLDIMKDFKSQSIDTPGVIDRVSTLFRGHPNLIQ 113

Query: 103 GFNTFLPKGYEI--------------------------------------------TLPL 118
           GFNTFLP GY I                                              P 
Sbjct: 114 GFNTFLPPGYRIECSMDPTNPNPIRVTTPTGTSTRPNIGGNSTNPYTQWSEQPQPHQYPQ 173

Query: 119 EDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEA 178
           E  Q  P   +EF  AI++VNKIKTRF     +YK FL+IL  Y++E K I EVY++V  
Sbjct: 174 EQTQHGPGGQIEFNHAISYVNKIKTRFANQPDIYKQFLEILQTYQREQKPIGEVYEQVTQ 233

Query: 179 LFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQVHVDKKERAMAS 238
           LF + PDLL +F  FLPDS         P  + +   +  +A      VH  +K+     
Sbjct: 234 LFANSPDLLNDFKQFLPDSGNQ------PLLQQNTHEELMNAHGAPAHVHPSEKQVYYGG 287

Query: 239 HA----------DRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERRDDHRRERERDDRD 288
           +             +++   P+P+H           +  G   +   D   ++ E     
Sbjct: 288 NGVSQLPPLGNFQPNMNAPVPNPEHHYPNTYQMPGAQEVGMGGQVMSDGLAKKPEH--FA 345

Query: 289 FENDVNRDFSMQRFPHKRKSARKIEDSTAEPLHQGGEGDENFGMHPVSSSYDDKNAM--- 345
           +EN+ N + S        ++    + S+  P +            PV+ S    N     
Sbjct: 346 YENNYNEEASYSSIRGAPQANMVQKQSSGTPGYSA----------PVAKSSTKANPTLVP 395

Query: 346 -------------KSMFSQELSFCEKVKDKL--RDDYQEFLRCLHLYTKEIITRSELQSL 390
                         S  S+EL F ++VK  +  +  Y EFL+ L+LY+++II +  L   
Sbjct: 396 GIPEPVPPSAVGPTSSLSEELGFFDRVKKAVGNKQTYNEFLKVLNLYSQDIIDKETLVER 455

Query: 391 VGDLLG-RYPDLMDGFNGFLARCEKS 415
           V   LG  YPDL++ F  F+   EKS
Sbjct: 456 VDSFLGDNYPDLLNWFKQFVGYKEKS 481



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 96/265 (36%), Positives = 145/265 (54%), Gaps = 24/265 (9%)

Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMRKN 557
           +L+LS C+   PSYR LPK       S R E+  EVLND WV   T  SED  F   RKN
Sbjct: 493 QLELSLCKAYGPSYRQLPKVETYMPCSGRDEMCWEVLNDEWVGHPTWASEDSGFISHRKN 552

Query: 558 QYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TA 613
           QYEE LF+ E++R E D  +E+   T + +E +  +I N T +     ++          
Sbjct: 553 QYEEILFKIEEERLEFDYHMEANLRTIQTLETIANRIANMTPEQKASFKLPPGLGHTSQT 612

Query: 614 LNLRCIERLY-GDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYS 672
           +  + I ++Y  D G +V+D L +N ++A+PV+L RLKQK EEW R + ++NKVW E+  
Sbjct: 613 IYKKVIRKIYDKDRGFEVIDALHENPAVAVPVVLKRLKQKDEEWKRAQREWNKVWREMEQ 672

Query: 673 KNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRR--SIVP 730
           K ++KSLDH    FKQ D K L AK L +EI  +  +++            N+R   + P
Sbjct: 673 KVFYKSLDHLGLTFKQADKKLLTAKQLVSEISTVKVEQQ------------NKRVHPLTP 720

Query: 731 ----HLEFEYSDPDIHEDLYQLIKY 751
                L ++++D D+  D+ +L ++
Sbjct: 721 KPQEQLNYKFTDYDVVFDIIRLSEF 745



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 43/69 (62%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDL 186
           +P+  ++A+++++++K +F     VY +FLDI+  ++ ++     V   V  LF+ HP+L
Sbjct: 52  RPLNVKDALSYLDQVKIQFFNQADVYNNFLDIMKDFKSQSIDTPGVIDRVSTLFRGHPNL 111

Query: 187 LEEFTHFLP 195
           ++ F  FLP
Sbjct: 112 IQGFNTFLP 120



 Score = 47.0 bits (110), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 6/85 (7%)

Query: 25  PSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTA 84
           P  QTQ     G GG  ++  N A++Y+  +K  F ++ + Y  FLE+++ ++ ++    
Sbjct: 172 PQEQTQ----HGPGG--QIEFNHAISYVNKIKTRFANQPDIYKQFLEILQTYQREQKPIG 225

Query: 85  GVIARVKELFKGHRDLILGFNTFLP 109
            V  +V +LF    DL+  F  FLP
Sbjct: 226 EVYEQVTQLFANSPDLLNDFKQFLP 250


>gi|219120333|ref|XP_002180907.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217407623|gb|EEC47559.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 156

 Score =  179 bits (454), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 86/155 (55%), Positives = 111/155 (71%)

Query: 41  QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDL 100
           ++L   DAL YL  VK  F D+   Y++FL++MK FK Q+IDT GVI RV  LF+G+R L
Sbjct: 2   RELKVEDALLYLDQVKVEFGDRPHIYNEFLDIMKTFKTQQIDTPGVIRRVSTLFQGNRRL 61

Query: 101 ILGFNTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILN 160
           +LGFNTFLP+GY+I LPL+ + PPP+ P+EF  AIN+V  IK RF  +   YK FL+IL+
Sbjct: 62  VLGFNTFLPEGYKIELPLDGDGPPPEAPMEFNHAINYVTNIKKRFANEPETYKKFLEILH 121

Query: 161 MYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLP 195
            Y+KE + I EV  EV  LF +HPDLL+EFT FLP
Sbjct: 122 TYQKEQRGIKEVLDEVSELFAEHPDLLKEFTFFLP 156



 Score = 44.7 bits (104), Expect = 0.27,   Method: Composition-based stats.
 Identities = 20/70 (28%), Positives = 39/70 (55%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDL 186
           + ++ E+A+ +++++K  F    H+Y  FLDI+  ++ +      V + V  LFQ +  L
Sbjct: 2   RELKVEDALLYLDQVKVEFGDRPHIYNEFLDIMKTFKTQQIDTPGVIRRVSTLFQGNRRL 61

Query: 187 LEEFTHFLPD 196
           +  F  FLP+
Sbjct: 62  VLGFNTFLPE 71


>gi|2194134|gb|AAB61109.1| F20P5.23 gene product [Arabidopsis thaliana]
          Length = 171

 Score =  177 bits (450), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 92/155 (59%), Positives = 113/155 (72%), Gaps = 2/155 (1%)

Query: 41  QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDL 100
           +KLTT DAL +L  VK  +QD RE YD FL +MKDF+ QR  T  VI++VKELFKG  +L
Sbjct: 16  KKLTTTDALDFLHLVKTKYQDNREIYDSFLTIMKDFRGQRAKTCDVISKVKELFKGQPEL 75

Query: 101 ILGFNTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILN 160
           +LGFNTFLP G+EITL  +DE     K   F+EA  FVNK+KTRFQ +D V+ SFL++L 
Sbjct: 76  LLGFNTFLPTGFEITLS-DDELTSNSKFAHFDEAYEFVNKVKTRFQNND-VFNSFLEVLK 133

Query: 161 MYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLP 195
            ++KENKS+ E+YQEV  LFQ H DLLEEF  FLP
Sbjct: 134 THKKENKSVAELYQEVAILFQGHRDLLEEFHLFLP 168


>gi|195996591|ref|XP_002108164.1| hypothetical protein TRIADDRAFT_52359 [Trichoplax adhaerens]
 gi|190588940|gb|EDV28962.1| hypothetical protein TRIADDRAFT_52359 [Trichoplax adhaerens]
          Length = 1197

 Score =  177 bits (449), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 108/299 (36%), Positives = 160/299 (53%), Gaps = 19/299 (6%)

Query: 488 SKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSE 547
           SKD+   +   E+D S C+R   SYR LPK +  P  S R+ L  EVLND WVS  S SE
Sbjct: 477 SKDRTNNEITMEIDFSTCKRYGASYRALPKTFNQPKCSGRSPLCKEVLNDTWVSFPSWSE 536

Query: 548 DYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRV 607
           D +F   RK Q+EE ++RCED+RFELD+++E+   T K +E + +K++          R+
Sbjct: 537 DSTFVSSRKTQFEEHIYRCEDERFELDIVIEANAATIKVLESVQKKLSRMNPDEVSKFRL 596

Query: 608 EDHFT----ALNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDF 663
           ++  +     +  + I+RLYGD  +D++D L+KN S+A+P++L RLK K EEW   R  F
Sbjct: 597 DNRLSGTSDVIYRKAIQRLYGDKAIDIIDSLKKNPSVAVPIVLKRLKAKDEEWREARRGF 656

Query: 664 NKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAG 723
           NKVW +I  K Y K +      FK  D K+L +K + +EI+ I E++R +      I  G
Sbjct: 657 NKVWKDINEKYYLKGIT-----FKTNDLKALRSKNMISEIENIFEERRSQ------IRDG 705

Query: 724 NRRSIVPHLEFEYSDPDIHEDLYQLIKYSCGEMCTTEQLD--KVMKIWTTFLEPMLGVP 780
                  HL F   D  + +D   LI +         + D  K+ +I   F+      P
Sbjct: 706 EPPKF--HLSFACEDKSVLDDAASLIIHHMKRQTNIHKNDKTKIKQILGIFIPDFFFAP 762



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 51/99 (51%), Positives = 64/99 (64%), Gaps = 1/99 (1%)

Query: 17  PMISSRGEPSGQTQV-VGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKD 75
           P ++        TQV V        Q+L   DAL+YL  VK  F ++ + Y+DFL++MKD
Sbjct: 68  PTLAQSTHAQTITQVHVPQAQHQQFQRLKVEDALSYLDEVKRQFGNQPQVYNDFLDIMKD 127

Query: 76  FKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEI 114
           FK+Q IDT GVI RV  LFKGH DLI+GFNTFLP GY+I
Sbjct: 128 FKSQSIDTPGVINRVSNLFKGHPDLIMGFNTFLPPGYKI 166



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 45/73 (61%), Positives = 54/73 (73%)

Query: 128 PVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLL 187
           P+EF  AIN+VNKIK RF+   +VY+ FL+IL+ Y+KE KSI EVY  V  LFQD  DLL
Sbjct: 244 PMEFNHAINYVNKIKNRFKEQPNVYRDFLEILHSYQKEQKSIREVYSRVAELFQDSKDLL 303

Query: 188 EEFTHFLPDSSGA 200
            EF+ FLPD SGA
Sbjct: 304 NEFSQFLPDGSGA 316



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 29/64 (45%), Positives = 42/64 (65%), Gaps = 2/64 (3%)

Query: 352 ELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFL 409
           EL+F +KV+   R+   Y  FLRCL L+ +E+ITRSEL +LV   LG++P+L+  F  F+
Sbjct: 403 ELAFFDKVRKAFRNQAVYDNFLRCLTLFNEEVITRSELLTLVTPFLGKFPELLAWFRIFI 462

Query: 410 ARCE 413
              E
Sbjct: 463 GHKE 466



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 48/86 (55%)

Query: 40  AQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRD 99
           A  +  N A+ Y+  +K+ F+++   Y DFLE++  ++ ++     V +RV ELF+  +D
Sbjct: 242 AHPMEFNHAINYVNKIKNRFKEQPNVYRDFLEILHSYQKEQKSIREVYSRVAELFQDSKD 301

Query: 100 LILGFNTFLPKGYEITLPLEDEQPPP 125
           L+  F+ FLP G    L L D  P P
Sbjct: 302 LLNEFSQFLPDGSGAHLSLSDMVPFP 327



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 47/84 (55%), Gaps = 7/84 (8%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           ++ E+A+++++++K +F     VY  FLDI+  ++ ++     V   V  LF+ HPDL+ 
Sbjct: 95  LKVEDALSYLDEVKRQFGNQPQVYNDFLDIMKDFKSQSIDTPGVINRVSNLFKGHPDLIM 154

Query: 189 EFTHFLP-------DSSGAASIHY 205
            F  FLP        S+ AAS H+
Sbjct: 155 GFNTFLPPGYKIEVHSNSAASPHH 178



 Score = 42.4 bits (98), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 26/93 (27%), Positives = 48/93 (51%), Gaps = 3/93 (3%)

Query: 334 PVSSSYDDKNAMKSMFSQELSFCEKVKDKLRDD---YQEFLRCLHLYTKEIITRSELQSL 390
           PV  S  +  A    F+  +++  K+K++ ++    Y++FL  LH Y KE  +  E+ S 
Sbjct: 232 PVPVSQANTQAHPMEFNHAINYVNKIKNRFKEQPNVYRDFLEILHSYQKEQKSIREVYSR 291

Query: 391 VGDLLGRYPDLMDGFNGFLARCEKSEELLADVM 423
           V +L     DL++ F+ FL     +   L+D++
Sbjct: 292 VAELFQDSKDLLNEFSQFLPDGSGAHLSLSDMV 324


>gi|340370997|ref|XP_003384032.1| PREDICTED: paired amphipathic helix protein Sin3a [Amphimedon
           queenslandica]
          Length = 1152

 Score =  177 bits (448), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 105/295 (35%), Positives = 163/295 (55%), Gaps = 25/295 (8%)

Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQ 558
           E+D ++ +R   SYR LPK+Y+    S RT L  EVLND WVS    SED +F   RK Q
Sbjct: 452 EIDFNSLKRHGASYRALPKSYVQLKCSGRTRLCHEVLNDTWVSFPMWSEDTTFHGTRKTQ 511

Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFT------ 612
           YEE +FRCED+RFELD++LE+   T K +E + +K++  + +T       +HFT      
Sbjct: 512 YEEYIFRCEDERFELDVVLETNLSTIKVLEAIQKKMSRMSPET------LNHFTLDNRLG 565

Query: 613 ----ALNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWA 668
                ++ + I R+YGD   D+++ L++N ++A+P++L RLK KQE+W   +  FNK+W 
Sbjct: 566 GFSEVIHRKAIHRIYGDKATDIIEGLKRNPAVAIPIVLKRLKSKQEDWLDAQRQFNKMWR 625

Query: 669 EIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSI 728
           E   K + KSLDH+   FK  D+K +  K+L  E++ + +++++      + A G    +
Sbjct: 626 EQLEKYHLKSLDHQGINFKASDTKIMRPKSLIGEVECLFDERQE------SFAEGKAADV 679

Query: 729 VPHLEFEYSDPD-IHEDLYQLIKYSC--GEMCTTEQLDKVMKIWTTFLEPMLGVP 780
            PHL F ++D + +  D   L+ Y        T E+  KV    T  L      P
Sbjct: 680 GPHLSFRFTDENHVFNDAVGLVMYYMKRASSLTKEEATKVKVFLTRTLSAFCYYP 734



 Score =  153 bits (386), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 94/245 (38%), Positives = 121/245 (49%), Gaps = 68/245 (27%)

Query: 27  GQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGV 86
           GQ  VV        Q+L   DAL+YL  VK  F ++ + Y+DFL++MK+FK+Q IDT GV
Sbjct: 47  GQGTVVSPSSSAQFQRLKVEDALSYLDQVKLQFGNQPQVYNDFLDIMKEFKSQSIDTPGV 106

Query: 87  IARVKELFKGHRDLILGFNTFL------------------PKGYEITL------------ 116
           I+RV  LFKGH DLI+GFNTFL                  P  +  TL            
Sbjct: 107 ISRVSNLFKGHPDLIVGFNTFLPPGFKIEVHGQNEINIQGPAQHSHTLQQIAMRHNAAAA 166

Query: 117 -------------------------PLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHV 151
                                    P    Q    +PVEF  AIN+VNKIK RFQG   V
Sbjct: 167 AAAASAGNQSGTGQTQRSSPSSSSNPALTGQQKGHQPVEFNHAINYVNKIKNRFQGQPDV 226

Query: 152 YKSFLDILNMYRKENKSI-------------TEVYQEVEALFQDHPDLLEEFTHFLPDSS 198
           YK+FL+IL+ Y+KE + +             TEVY +V  LFQ+  DLL EF  FLPD++
Sbjct: 227 YKAFLEILHTYQKEQRLLKDGGIPSTTPLSETEVYGQVSKLFQNQEDLLSEFGQFLPDAT 286

Query: 199 GAASI 203
            + S+
Sbjct: 287 SSHSL 291



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/66 (39%), Positives = 38/66 (57%), Gaps = 2/66 (3%)

Query: 352 ELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFL 409
           E++  +K++  L +   Y  FLRCL L+ +EI++R EL  LV   LG++PDL   F   L
Sbjct: 361 EVALFDKIRKALHNPEVYDNFLRCLMLFNEEIVSRQELTQLVTPFLGKFPDLFCQFKVLL 420

Query: 410 ARCEKS 415
              E S
Sbjct: 421 GFKEPS 426


>gi|30697962|ref|NP_177161.2| paired amphipathic helix domain-containing protein [Arabidopsis
           thaliana]
 gi|29824335|gb|AAP04128.1| unknown protein [Arabidopsis thaliana]
 gi|30793839|gb|AAP40372.1| unknown protein [Arabidopsis thaliana]
 gi|110739251|dbj|BAF01539.1| hypothetical protein [Arabidopsis thaliana]
 gi|332196889|gb|AEE35010.1| paired amphipathic helix domain-containing protein [Arabidopsis
           thaliana]
          Length = 160

 Score =  176 bits (447), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 92/155 (59%), Positives = 113/155 (72%), Gaps = 2/155 (1%)

Query: 41  QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDL 100
           +KLTT DAL +L  VK  +QD RE YD FL +MKDF+ QR  T  VI++VKELFKG  +L
Sbjct: 5   KKLTTTDALDFLHLVKTKYQDNREIYDSFLTIMKDFRGQRAKTCDVISKVKELFKGQPEL 64

Query: 101 ILGFNTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILN 160
           +LGFNTFLP G+EITL  +DE     K   F+EA  FVNK+KTRFQ +D V+ SFL++L 
Sbjct: 65  LLGFNTFLPTGFEITLS-DDELTSNSKFAHFDEAYEFVNKVKTRFQNND-VFNSFLEVLK 122

Query: 161 MYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLP 195
            ++KENKS+ E+YQEV  LFQ H DLLEEF  FLP
Sbjct: 123 THKKENKSVAELYQEVAILFQGHRDLLEEFHLFLP 157


>gi|297850902|ref|XP_002893332.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297339174|gb|EFH69591.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 179

 Score =  176 bits (445), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 98/171 (57%), Positives = 124/171 (72%), Gaps = 3/171 (1%)

Query: 36  GGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFK 95
           G GGA K TTN A  YLKAVK  FQD+ EKYD+FLE+M DFK +R+D   VI R+KEL K
Sbjct: 3   GDGGAHKPTTNVAFEYLKAVKAKFQDQHEKYDEFLEIMNDFKCRRVDRLDVIIRMKELLK 62

Query: 96  GHRDLILGFNTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSF 155
            H++L+LGFNTFLPKG+ ITL  +D + P  K  +F++A+ F+ K++TRFQG    YKSF
Sbjct: 63  EHKELLLGFNTFLPKGFRITLLPDDHEQPSHKEPDFKDALTFITKVQTRFQG-GRAYKSF 121

Query: 156 LDILNMYRKEN--KSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIH 204
           LDIL++YR E   KS+T+VY EV  LF+DH DLL EF  FLP +S   S+H
Sbjct: 122 LDILSIYRNERNLKSLTQVYDEVSILFRDHTDLLAEFNRFLPATSPTTSLH 172


>gi|351712957|gb|EHB15876.1| Paired amphipathic helix protein Sin3b, partial [Heterocephalus
           glaber]
          Length = 1119

 Score =  176 bits (445), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 152/287 (52%), Gaps = 38/287 (13%)

Query: 498 QELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEV----------------------- 534
           +E+D ++C+R   SYR LPK Y  P  S RT +  EV                       
Sbjct: 347 REIDYASCKRIGSSYRALPKTYQQPRCSGRTAICKEVAAAAGGRHRPGGLGPRGSGPLPT 406

Query: 535 ------LNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVE 588
                 LND WVS  S SED +F   +K  YEE L RCED+RFELD++LE+   T + +E
Sbjct: 407 RPCVQVLNDTWVSFPSWSEDSTFVSSKKTPYEEQLHRCEDERFELDVVLETNLATIRVLE 466

Query: 589 ELLEKINNNTIKTDGPIRVEDHFTA----LNLRCIERLYGDHGLDVMDVLRKNASLALPV 644
            + +K++    +     R++D        +  R I R+YGD   ++++ L+KN   A+PV
Sbjct: 467 SVQKKLSRMAPEDQERFRLDDALGGTSEVIQRRAIHRIYGDKAPEIIESLKKNPVAAVPV 526

Query: 645 ILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIK 704
           +L RLK K+EEW   +  FNK+W E Y K Y KSLDH++  FKQ D+K+L +K+L  EI+
Sbjct: 527 VLKRLKAKEEEWREAQQGFNKIWREQYEKAYLKSLDHQAVNFKQNDTKALRSKSLLNEIE 586

Query: 705 EISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLIKY 751
            + ++ +++     +  A       PHL F Y D  I ED   LI Y
Sbjct: 587 SVYDEHQEQHSEGRSAPASE-----PHLIFVYEDRQILEDAAALISY 628



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/198 (42%), Positives = 104/198 (52%), Gaps = 45/198 (22%)

Query: 45  TNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGF 104
             DAL YL  VK  F      Y+ FLE+MK+FK+Q IDT GVI RV +LF  H DLI+GF
Sbjct: 1   VEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRVSQLFHEHPDLIVGF 60

Query: 105 NTFLPKGYEITLP-----------------------LED--EQPP-----PKKP-----V 129
           N FLP GY I +P                        ED  +Q P     P+ P     V
Sbjct: 61  NAFLPLGYRIDIPKNGKINIQSPLMSQENSHGHGDCTEDFRQQAPYKEDKPQGPLESDSV 120

Query: 130 EFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKE----------NKSITEVYQEVEAL 179
           EF  AI++VNKIKTRF     +Y+SFL+IL+ Y+KE            S  EV+ EV  L
Sbjct: 121 EFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLHTKARPFRGMSEEEVFTEVANL 180

Query: 180 FQDHPDLLEEFTHFLPDS 197
           F+   DLL EF  FLP++
Sbjct: 181 FRGQEDLLSEFGQFLPEA 198



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 30/79 (37%), Positives = 47/79 (59%), Gaps = 5/79 (6%)

Query: 351 QELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGF 408
           QE SF +KV+  L+    Y+ FLRC+ L+ +E+++ +EL  LV   LG++P+L   F  F
Sbjct: 266 QEFSFFDKVRRVLKSQEVYENFLRCIALFNQELVSGAELLQLVSPFLGKFPELFAQFKSF 325

Query: 409 LARCEKSEELLADVMSKKS 427
           L   E S    A  +S++S
Sbjct: 326 LGVKELS---FAPPLSERS 341


>gi|189238796|ref|XP_974873.2| PREDICTED: similar to transcriptional co-repressor Sin3A [Tribolium
           castaneum]
 gi|270009983|gb|EFA06431.1| hypothetical protein TcasGA2_TC009311 [Tribolium castaneum]
          Length = 1382

 Score =  174 bits (442), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 96/255 (37%), Positives = 151/255 (59%), Gaps = 10/255 (3%)

Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQ 558
           E+DL+  +R   SY ++P +    + S RT+L  EVLND WVS  + SED +F   RK Q
Sbjct: 596 EIDLTTAKRLGASYCVIPPSQEGLTCSGRTQLCKEVLNDQWVSFPTWSEDSTFVSSRKTQ 655

Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TAL 614
           YEE ++RCED+RFELD+++E+   T + +E + +K++    +     R++D        L
Sbjct: 656 YEEYMYRCEDERFELDVVIETNASTIRVLEGVNKKMSRMNAEDVAKYRLDDCLGGSSPTL 715

Query: 615 NLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKN 674
           + R ++R+YGD   D++D L++N   A+PV+L RLK K+EEW   +  FNK+W E   K 
Sbjct: 716 HQRALKRIYGDKAQDIIDGLKRNPQTAVPVVLRRLKAKEEEWREAQKGFNKIWREQNEKY 775

Query: 675 YHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEF 734
           Y KSLDH+   FKQ D K+L +K+L  EI+ + +++ ++++       G    + PHL  
Sbjct: 776 YLKSLDHQGINFKQTDVKALRSKSLFNEIETLFDERHEQNE------EGAEPVVGPHLVL 829

Query: 735 EYSDPDIHEDLYQLI 749
            Y D  I +D   L+
Sbjct: 830 PYKDRTILDDAANLL 844



 Score = 99.4 bits (246), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 47/85 (55%), Positives = 59/85 (69%)

Query: 37  GGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKG 96
           G   Q+L   DAL+YL  VK  F  K + Y+DFL++MK+FK+Q IDT GVI RV  LFKG
Sbjct: 139 GSNFQRLKVEDALSYLDLVKYKFGSKPQVYNDFLDIMKEFKSQSIDTPGVIQRVSNLFKG 198

Query: 97  HRDLILGFNTFLPKGYEITLPLEDE 121
             DLI+GFNTFLP GY+I +   D+
Sbjct: 199 FPDLIVGFNTFLPPGYKIEVQKSDQ 223



 Score = 82.8 bits (203), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 44/114 (38%), Positives = 65/114 (57%), Gaps = 17/114 (14%)

Query: 124 PPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI-------------- 169
           P  +PV+F  AIN+VNKIK RFQ     YK FLDIL++Y+KE +++              
Sbjct: 339 PQNQPVQFNHAINYVNKIKNRFQDQPEKYKRFLDILHIYQKEQRTMKESSGGGSGGKHLT 398

Query: 170 -TEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMP 222
             EVY +V  LF++  DLL EF  FLPD++  + I+  P   +S+++   +  P
Sbjct: 399 EQEVYSQVAKLFENQSDLLAEFGQFLPDAT--SHINPAPISDHSVVKKPPTKQP 450



 Score = 57.0 bits (136), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 40/62 (64%), Gaps = 2/62 (3%)

Query: 354 SFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLAR 411
           +F +KV+  +R    Y  FLRCL L+ +EII++SEL  +V   LG++P+LM  F  FL +
Sbjct: 514 AFFDKVRKAVRTQEVYNNFLRCLILFNQEIISKSELIMVVTPFLGKFPELMRWFREFLGQ 573

Query: 412 CE 413
            E
Sbjct: 574 NE 575



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 39/67 (58%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           ++ E+A+++++ +K +F     VY  FLDI+  ++ ++     V Q V  LF+  PDL+ 
Sbjct: 145 LKVEDALSYLDLVKYKFGSKPQVYNDFLDIMKEFKSQSIDTPGVIQRVSNLFKGFPDLIV 204

Query: 189 EFTHFLP 195
            F  FLP
Sbjct: 205 GFNTFLP 211



 Score = 45.1 bits (105), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 53/109 (48%), Gaps = 21/109 (19%)

Query: 41  QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDF-KAQR--------------IDTAG 85
           Q +  N A+ Y+  +K+ FQD+ EKY  FL+++  + K QR              +    
Sbjct: 342 QPVQFNHAINYVNKIKNRFQDQPEKYKRFLDILHIYQKEQRTMKESSGGGSGGKHLTEQE 401

Query: 86  VIARVKELFKGHRDLILGFNTFLP--KGYEITLPLED----EQPPPKKP 128
           V ++V +LF+   DL+  F  FLP    +    P+ D    ++PP K+P
Sbjct: 402 VYSQVAKLFENQSDLLAEFGQFLPDATSHINPAPISDHSVVKKPPTKQP 450


>gi|290990393|ref|XP_002677821.1| histone deacetylase complex subunit Sin3b [Naegleria gruberi]
 gi|284091430|gb|EFC45077.1| histone deacetylase complex subunit Sin3b [Naegleria gruberi]
          Length = 1000

 Score =  174 bits (440), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 102/270 (37%), Positives = 154/270 (57%), Gaps = 25/270 (9%)

Query: 510 PSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDD 569
           PSYRL  KNY  P  S+RTEL  +VLND +VSV +GSE+ S    +K+QY+E +++CEDD
Sbjct: 365 PSYRLQSKNYSEPICSERTELCHQVLNDEFVSVPAGSEE-SRDIQKKSQYDEIIYQCEDD 423

Query: 570 RFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFTALNLRCIERLYGDHGLD 629
           R ELD+++E    T K     +EKINN+   T G   ++D   A     I R+Y D G D
Sbjct: 424 RTELDIVVEQNVSTIKFFTSFMEKINNDEPITFGIDMLKDIHKA----TINRIYADKGND 479

Query: 630 VMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQ 689
           +++ LRKN ++A+PV+  RLKQK EEW + R + N+ W +IY KN+ K+++ +   FK  
Sbjct: 480 ILEGLRKNPTVAIPVVYKRLKQKDEEWRKARKELNRFWHDIYEKNFQKAMESQYNTFKTI 539

Query: 690 DSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLI 749
           + K L  K +  +IK+  E  R                    L F++ D  IH D+Y ++
Sbjct: 540 EKKRLHFKNIFKDIKQRHEYSRP-------------------LVFDFPDKSIHNDIYYML 580

Query: 750 KYSCGEMCTTEQLDKVMKIWTTFLEPMLGV 779
                E+ T E++  + ++W+ FL P L +
Sbjct: 581 INLTNEL-TEEEISSINQLWSDFLIPFLDL 609



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 87/217 (40%), Positives = 116/217 (53%), Gaps = 35/217 (16%)

Query: 11  NSQIKRPMISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFL 70
           N + K P + +   P+  +           Q L  +DALAYL  VK  + ++   Y  FL
Sbjct: 15  NPKTKVPKVQT---PTSSSATTPPPPNNNQQALRVSDALAYLDLVKRTYLNEPHVYARFL 71

Query: 71  EVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITL-------------- 116
           E+MK+FK   IDT GVI +V ELFK H  LILGFN+FLP GY+I L              
Sbjct: 72  EIMKEFKNHIIDTPGVIQKVSELFKTHTHLILGFNSFLPPGYKIELDTNNEVEVKKKAST 131

Query: 117 --------------PLEDEQPPP----KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDI 158
                         P  D  PP     ++ ++FE+AI++V KIK RF      YKSFLDI
Sbjct: 132 PTPPPRVPIPTIPTPKTDSTPPATTRSERSIDFEQAISYVTKIKKRFADSPATYKSFLDI 191

Query: 159 LNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLP 195
           L+ Y+K+  +I +VY++V  LF+DH DLL EF  FLP
Sbjct: 192 LHNYQKQQTTIKKVYEQVSELFRDHNDLLHEFAQFLP 228



 Score = 48.9 bits (115), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 36/66 (54%)

Query: 48  ALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTF 107
           A++Y+  +K  F D    Y  FL+++ +++ Q+     V  +V ELF+ H DL+  F  F
Sbjct: 167 AISYVTKIKKRFADSPATYKSFLDILHNYQKQQTTIKKVYEQVSELFRDHNDLLHEFAQF 226

Query: 108 LPKGYE 113
           LP   E
Sbjct: 227 LPMPVE 232


>gi|449691034|ref|XP_002161592.2| PREDICTED: paired amphipathic helix protein Sin3a-like, partial
           [Hydra magnipapillata]
          Length = 839

 Score =  173 bits (439), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 91/242 (37%), Positives = 146/242 (60%), Gaps = 10/242 (4%)

Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQ 558
           E+D ++C+R   SYR LPK+Y  P  S RT+L  ++LND WVS+ S SED  F   RK Q
Sbjct: 603 EIDFASCKRSGASYRALPKSYTQPKCSGRTQLCKDLLNDTWVSLPSWSEDTQFPGTRKTQ 662

Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFTA----L 614
           YEE +++CED+RFELD+++E+   T K +E + +K++         +R+++        +
Sbjct: 663 YEEYIYKCEDERFELDIVVEANLSTIKVLEGVQKKLSRMNSDDQLKLRLDNCLGGTSEII 722

Query: 615 NLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKN 674
           + + I R+YGD   +++D L+K  ++A+PV+L RLKQK EEW   +  FN++W +   K 
Sbjct: 723 HRKAIYRIYGDKSPEIIDGLKKTPNVAIPVVLKRLKQKDEEWRIAQKQFNRIWRDQNEKY 782

Query: 675 YHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEF 734
           Y KSLDH+   FKQ D K++ +K++   I+ + E++  + D       G+     PH+ F
Sbjct: 783 YLKSLDHQGINFKQNDLKAIRSKSIIQHIEMLYEERSDQID------EGSTELSGPHITF 836

Query: 735 EY 736
            Y
Sbjct: 837 VY 838



 Score =  110 bits (275), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 55/101 (54%), Positives = 70/101 (69%), Gaps = 4/101 (3%)

Query: 24  EPSGQTQVVG----GGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQ 79
           +PS QT V G     GG    Q+L   DAL+YL  VK  F +K + Y++FL++MK+FK+Q
Sbjct: 137 KPSFQTHVQGPSHVAGGQQQYQRLKVEDALSYLDQVKLQFGNKPQVYNEFLDIMKEFKSQ 196

Query: 80  RIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLED 120
            IDT GVI+RV  LFKGH DLI+GFNTFLP GY+I + L D
Sbjct: 197 TIDTPGVISRVSALFKGHIDLIVGFNTFLPPGYKIEVSLTD 237



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/93 (44%), Positives = 51/93 (54%), Gaps = 25/93 (26%)

Query: 134 AINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI------------------------ 169
           AIN+V KIK RFQG   VY+ FLDILN Y+ E K+I                        
Sbjct: 333 AINYVTKIKNRFQGQPEVYQKFLDILNNYQTEQKAIKENTVDQYGRVCQEQDIYAREGKL 392

Query: 170 -TEVYQEVEALFQDHPDLLEEFTHFLPDSSGAA 201
            TEVYQ+V  LF    DLL+EF+ FLPD++G+ 
Sbjct: 393 ATEVYQQVAKLFNKQEDLLQEFSQFLPDATGST 425



 Score = 58.2 bits (139), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 27/69 (39%), Positives = 41/69 (59%), Gaps = 2/69 (2%)

Query: 344 AMKSMFSQELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDL 401
           A+K     + +F +KV+  L+    Y+ FLRCL L+  E+I+R+EL  L    LG++PDL
Sbjct: 508 AVKHGSFSDFAFFDKVRKALKSQEVYENFLRCLTLFNNEVISRAELIQLSTTFLGKFPDL 567

Query: 402 MDGFNGFLA 410
            + F  FL 
Sbjct: 568 FNWFKTFLG 576



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 39/67 (58%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           ++ E+A+++++++K +F     VY  FLDI+  ++ +      V   V ALF+ H DL+ 
Sbjct: 160 LKVEDALSYLDQVKLQFGNKPQVYNEFLDIMKEFKSQTIDTPGVISRVSALFKGHIDLIV 219

Query: 189 EFTHFLP 195
            F  FLP
Sbjct: 220 GFNTFLP 226


>gi|328353525|emb|CCA39923.1| Transcriptional regulatory protein SIN3 [Komagataella pastoris CBS
           7435]
          Length = 1431

 Score =  169 bits (427), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 102/273 (37%), Positives = 147/273 (53%), Gaps = 14/273 (5%)

Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMRKN 557
           +L+LS C+ C PSYRLLPK       S R ++  EVLND WV   T  SE+  F   RKN
Sbjct: 613 QLELSLCKSCGPSYRLLPKAETYMPCSGRDDMCWEVLNDEWVGHPTWASEESGFVAHRKN 672

Query: 558 QYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TA 613
           QYEE LFR E++R E D  +E+   T + +E +  +I N T +     ++        + 
Sbjct: 673 QYEEVLFRIEEERHEYDYYMEANLRTIQTLETIANRIANMTPEEKAHFKLPPGLGHTSST 732

Query: 614 LNLRCIERLY-GDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYS 672
           +  + I ++Y  D G +V+D L +N ++A+P+IL RLKQK EEW R   ++NKVW E+  
Sbjct: 733 IYKKVIRKIYDKDRGFEVIDALHENPAVAVPIILKRLKQKDEEWKRSHREWNKVWREMEQ 792

Query: 673 KNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEIS-EKKRKEDDVLLAIAAGNRRSIVPH 731
           K ++KSLDH    FKQ D K L  K L AE+  I  E+ +K    L  ++          
Sbjct: 793 KVFYKSLDHLGLTFKQSDKKLLTTKQLVAEVSTIKVEQSQKRLHPLTPVSKE-------Q 845

Query: 732 LEFEYSDPDIHEDLYQLIKYSCGEMCTTEQLDK 764
           L++ Y D D+  D+  L+    G   +  Q DK
Sbjct: 846 LQYHYKDYDVMFDIINLVYIFLGHSSSYSQQDK 878



 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 44/72 (61%), Positives = 54/72 (75%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
           L   DAL+YL  VK  F D+ + Y+ FLE+MKDFK+Q IDT GVI RV  LF+GH +LI 
Sbjct: 136 LNVKDALSYLDQVKVRFLDQPDVYNHFLEIMKDFKSQSIDTPGVIERVSTLFRGHPNLIQ 195

Query: 103 GFNTFLPKGYEI 114
           GFNTFLP+GY+I
Sbjct: 196 GFNTFLPQGYKI 207



 Score = 93.2 bits (230), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 42/73 (57%), Positives = 54/73 (73%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           V F  AI++VNKIKTRF     +YKSFL+IL  Y+KE K I EVYQ+V  LFQ+ PDLL+
Sbjct: 340 VGFNHAISYVNKIKTRFANQPDIYKSFLEILQTYQKEQKPINEVYQQVTVLFQNAPDLLD 399

Query: 189 EFTHFLPDSSGAA 201
           +F  FLP++SG +
Sbjct: 400 DFEQFLPETSGQS 412



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 7/85 (8%)

Query: 333 HPVSSSYDDKNAMKSMFSQELSFCEKVKDKL--RDDYQEFLRCLHLYTKEIITRSELQSL 390
            PVS+   D N      S+E+SF +KVK  +  +  Y EFL+ ++LY+++II +  L + 
Sbjct: 522 QPVSTGISDSN-----LSEEISFFDKVKKSISNKQTYNEFLKLINLYSQDIIDKDVLVAK 576

Query: 391 VGDLLGRYPDLMDGFNGFLARCEKS 415
           V   +G +P+L   F  F+   EKS
Sbjct: 577 VECFIGAFPELFSWFKTFVGYEEKS 601



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 43/69 (62%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDL 186
           +P+  ++A+++++++K RF     VY  FL+I+  ++ ++     V + V  LF+ HP+L
Sbjct: 134 RPLNVKDALSYLDQVKVRFLDQPDVYNHFLEIMKDFKSQSIDTPGVIERVSTLFRGHPNL 193

Query: 187 LEEFTHFLP 195
           ++ F  FLP
Sbjct: 194 IQGFNTFLP 202



 Score = 44.7 bits (104), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 20/106 (18%)

Query: 39  GAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHR 98
           GAQ +  N A++Y+  +K  F ++ + Y  FLE+++ ++ ++     V  +V  LF+   
Sbjct: 337 GAQ-VGFNHAISYVNKIKTRFANQPDIYKSFLEILQTYQKEQKPINEVYQQVTVLFQNAP 395

Query: 99  DLILGFNTFLPK-----------GYE--------ITLPLEDEQPPP 125
           DL+  F  FLP+           GYE        I LP     PPP
Sbjct: 396 DLLDDFEQFLPETSGQSLNVHQGGYEEKHNGHGTIQLPPVGNFPPP 441


>gi|254570703|ref|XP_002492461.1| Component of the Sin3p-Rpd3p histone deacetylase complex
           [Komagataella pastoris GS115]
 gi|238032259|emb|CAY70276.1| Component of the Sin3p-Rpd3p histone deacetylase complex
           [Komagataella pastoris GS115]
          Length = 1449

 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 102/273 (37%), Positives = 147/273 (53%), Gaps = 14/273 (5%)

Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMRKN 557
           +L+LS C+ C PSYRLLPK       S R ++  EVLND WV   T  SE+  F   RKN
Sbjct: 631 QLELSLCKSCGPSYRLLPKAETYMPCSGRDDMCWEVLNDEWVGHPTWASEESGFVAHRKN 690

Query: 558 QYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TA 613
           QYEE LFR E++R E D  +E+   T + +E +  +I N T +     ++        + 
Sbjct: 691 QYEEVLFRIEEERHEYDYYMEANLRTIQTLETIANRIANMTPEEKAHFKLPPGLGHTSST 750

Query: 614 LNLRCIERLY-GDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYS 672
           +  + I ++Y  D G +V+D L +N ++A+P+IL RLKQK EEW R   ++NKVW E+  
Sbjct: 751 IYKKVIRKIYDKDRGFEVIDALHENPAVAVPIILKRLKQKDEEWKRSHREWNKVWREMEQ 810

Query: 673 KNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEIS-EKKRKEDDVLLAIAAGNRRSIVPH 731
           K ++KSLDH    FKQ D K L  K L AE+  I  E+ +K    L  ++          
Sbjct: 811 KVFYKSLDHLGLTFKQSDKKLLTTKQLVAEVSTIKVEQSQKRLHPLTPVSKE-------Q 863

Query: 732 LEFEYSDPDIHEDLYQLIKYSCGEMCTTEQLDK 764
           L++ Y D D+  D+  L+    G   +  Q DK
Sbjct: 864 LQYHYKDYDVMFDIINLVYIFLGHSSSYSQQDK 896



 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 44/72 (61%), Positives = 54/72 (75%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
           L   DAL+YL  VK  F D+ + Y+ FLE+MKDFK+Q IDT GVI RV  LF+GH +LI 
Sbjct: 154 LNVKDALSYLDQVKVRFLDQPDVYNHFLEIMKDFKSQSIDTPGVIERVSTLFRGHPNLIQ 213

Query: 103 GFNTFLPKGYEI 114
           GFNTFLP+GY+I
Sbjct: 214 GFNTFLPQGYKI 225



 Score = 93.2 bits (230), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 42/73 (57%), Positives = 54/73 (73%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           V F  AI++VNKIKTRF     +YKSFL+IL  Y+KE K I EVYQ+V  LFQ+ PDLL+
Sbjct: 358 VGFNHAISYVNKIKTRFANQPDIYKSFLEILQTYQKEQKPINEVYQQVTVLFQNAPDLLD 417

Query: 189 EFTHFLPDSSGAA 201
           +F  FLP++SG +
Sbjct: 418 DFEQFLPETSGQS 430



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 7/85 (8%)

Query: 333 HPVSSSYDDKNAMKSMFSQELSFCEKVKDKL--RDDYQEFLRCLHLYTKEIITRSELQSL 390
            PVS+   D N      S+E+SF +KVK  +  +  Y EFL+ ++LY+++II +  L + 
Sbjct: 540 QPVSTGISDSN-----LSEEISFFDKVKKSISNKQTYNEFLKLINLYSQDIIDKDVLVAK 594

Query: 391 VGDLLGRYPDLMDGFNGFLARCEKS 415
           V   +G +P+L   F  F+   EKS
Sbjct: 595 VECFIGAFPELFSWFKTFVGYEEKS 619



 Score = 53.5 bits (127), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 43/69 (62%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDL 186
           +P+  ++A+++++++K RF     VY  FL+I+  ++ ++     V + V  LF+ HP+L
Sbjct: 152 RPLNVKDALSYLDQVKVRFLDQPDVYNHFLEIMKDFKSQSIDTPGVIERVSTLFRGHPNL 211

Query: 187 LEEFTHFLP 195
           ++ F  FLP
Sbjct: 212 IQGFNTFLP 220



 Score = 44.7 bits (104), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 20/106 (18%)

Query: 39  GAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHR 98
           GAQ +  N A++Y+  +K  F ++ + Y  FLE+++ ++ ++     V  +V  LF+   
Sbjct: 355 GAQ-VGFNHAISYVNKIKTRFANQPDIYKSFLEILQTYQKEQKPINEVYQQVTVLFQNAP 413

Query: 99  DLILGFNTFLPK-----------GYE--------ITLPLEDEQPPP 125
           DL+  F  FLP+           GYE        I LP     PPP
Sbjct: 414 DLLDDFEQFLPETSGQSLNVHQGGYEEKHNGHGTIQLPPVGNFPPP 459


>gi|440791312|gb|ELR12555.1| paired amphipathic helix protein sin3, putative [Acanthamoeba
           castellanii str. Neff]
          Length = 1039

 Score =  168 bits (425), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 93/194 (47%), Positives = 124/194 (63%), Gaps = 20/194 (10%)

Query: 48  ALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTF 107
           AL +L  VK  FQ + + Y+ FL+VMK+FKAQ IDT GVIARV +LFKGH DLILGFNTF
Sbjct: 60  ALDFLDQVKLQFQHQPQIYNYFLDVMKEFKAQTIDTPGVIARVSDLFKGHDDLILGFNTF 119

Query: 108 LPKGYEITLPLEDEQPP-----PKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMY 162
           LP GY+I +P+    PP      +K  EF+ A  +V KIK RF     +YK+FL+IL+ +
Sbjct: 120 LPPGYKI-VPVAAMPPPSESDVARKQPEFDHARAYVKKIKMRFLHQPQIYKNFLEILHTF 178

Query: 163 RKENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSG------------AASIHYVPSGR 210
            +E  +I +VY++V  LFQDHPDLLEEF+ FLP+++             AA IH+ P  +
Sbjct: 179 HREQHTIKDVYEQVAYLFQDHPDLLEEFSEFLPENTTPNPQLGGVAYPQAAPIHHPP--K 236

Query: 211 NSILRDRSSAMPTA 224
            +  + R   M TA
Sbjct: 237 RTAPKIRGQPMKTA 250



 Score =  146 bits (369), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 102/291 (35%), Positives = 155/291 (53%), Gaps = 45/291 (15%)

Query: 497 IQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRK 556
           + ++D S C+R  PSYR LPKNY   + +   EL  EVLN  +VS+  GSE+  FK  RK
Sbjct: 379 LADIDFSACKRYGPSYRALPKNYQKATVTG-DELSREVLNTKYVSMAMGSEEGGFKGSRK 437

Query: 557 NQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFTALNL 616
           NQYEE LF+     +ELD+++E  + T + +E +L++I +         ++ D+   L++
Sbjct: 438 NQYEEVLFK-----YELDLVIELNSSTMRALEPILKQIMDMPEDEASRFKI-DNLDVLHI 491

Query: 617 RCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYH 676
           R IER+YG+ G DV+D L  N  +A+PVIL RLKQK  EW   R ++NK+W E   KN  
Sbjct: 492 RSIERIYGNKGPDVVDKLFNNPVVAVPVILKRLKQKDNEWRNARREWNKIWREAEKKN-- 549

Query: 677 KSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVP--HLEF 734
                            L +K L AEIK+  ++K K           ++ S  P  HL++
Sbjct: 550 -----------------LSSKVLLAEIKQKYQEKLK-----------HKPSEQPNYHLKY 581

Query: 735 EYSDPDIHEDLYQLIKYSCGEMCTT---EQLDKVMKIWTTFLEPMLGVPSR 782
             +DP +  D+  LI  +   + +    E+LD  M+    F++    VPS+
Sbjct: 582 GMNDPQVLNDINDLITNAAERILSKADRERLDAFME---RFIKAFFLVPSK 629



 Score = 56.2 bits (134), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 41/62 (66%), Gaps = 2/62 (3%)

Query: 351 QELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGF 408
           +EL+F  KV+ KL +D  Y EFL+CL+L++ +IITR EL  +V D+    P+L + F  F
Sbjct: 293 KELNFFYKVRKKLNNDKLYNEFLKCLNLFSNKIITRVELAVVVRDVFAGEPELFERFKKF 352

Query: 409 LA 410
           + 
Sbjct: 353 IG 354



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 45/88 (51%)

Query: 125 PKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHP 184
           P + V+FE A++F++++K +FQ    +Y  FLD++  ++ +      V   V  LF+ H 
Sbjct: 51  PTRGVKFESALDFLDQVKLQFQHQPQIYNYFLDVMKEFKAQTIDTPGVIARVSDLFKGHD 110

Query: 185 DLLEEFTHFLPDSSGAASIHYVPSGRNS 212
           DL+  F  FLP       +  +P    S
Sbjct: 111 DLILGFNTFLPPGYKIVPVAAMPPPSES 138


>gi|320582020|gb|EFW96239.1| Sin3p-Rpd3p histone-deacetylase complex, DNA binding subunit,
           putative [Ogataea parapolymorpha DL-1]
          Length = 1257

 Score =  167 bits (423), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 103/274 (37%), Positives = 147/274 (53%), Gaps = 14/274 (5%)

Query: 498 QELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMRK 556
           Q+LDL  C+ C PSYRLLPK+      S R E+  EVLND W       SE+  F   RK
Sbjct: 493 QQLDLMMCKACGPSYRLLPKSQTYMPCSGRDEMCWEVLNDEWAGHPVWASEESGFIAHRK 552

Query: 557 NQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNT----IKTDGPIRVEDHFT 612
           NQYE+ LFR E++R E D  +E+   T + +E +  ++ N T     K   P  +     
Sbjct: 553 NQYEDILFRIEEERHEYDFYMEANLRTIQTLETIANRLANMTPDEKAKFKLPPGLGHTSV 612

Query: 613 ALNLRCIERLY-GDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIY 671
            +  + I ++Y  D G +V++ L +N ++A+PV+L RLKQK EEW R   ++NKVW E+ 
Sbjct: 613 TIYKKVIRKVYDKDKGFEVIEALHENPAVAVPVVLKRLKQKDEEWKRAHREWNKVWRELE 672

Query: 672 SKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEI-SEKKRKEDDVLLAIAAGNRRSIVP 730
            K ++KSLDH    FKQ D K L  K L +EI  I  E+ +K+   L+ I A       P
Sbjct: 673 QKAFYKSLDHLGLTFKQIDKKLLTNKQLVSEISTIKQEQMQKKLHPLMPIPA-------P 725

Query: 731 HLEFEYSDPDIHEDLYQLIKYSCGEMCTTEQLDK 764
            L + Y D ++  D+ +L+        T  Q DK
Sbjct: 726 QLSYHYDDFEVFMDILKLVDCYLSHSQTYSQYDK 759



 Score =  112 bits (281), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 89/304 (29%), Positives = 141/304 (46%), Gaps = 17/304 (5%)

Query: 128 PVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLL 187
           P EF++AIN+VNKIK R+  +  +YK FL+ L MY+K  K I EVY+E+  LF+D PDLL
Sbjct: 206 PAEFDQAINYVNKIKQRYANEPDIYKHFLENLQMYQKGIKPIDEVYREISVLFRDAPDLL 265

Query: 188 EEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQVHVDKKERAMASHADRDLSVD 247
           E+F  F+PD++       V   +  +   +        QV+ D K+   A H  +  S  
Sbjct: 266 EDFKLFMPDTTAP-----VLDQQGRMQGPQLGEYNNYGQVYYDGKQ---AGHLGQPHSQA 317

Query: 248 RPDPDHDRV-LLKSDKDQRRRGEKERERRDDHRRERERDDRDFENDVNRDFSMQRFPHKR 306
           +P   + ++  + S +    R    +    D ++              + + M + P+  
Sbjct: 318 QPQQSNVQLPPVGSFQPPTFRQPVPQMPSKDKKKRWGSQQLSQSIPSQKSYQMTQ-PYDE 376

Query: 307 KSARKIEDSTAEPLHQGGEGDENFGMHPVSSSYDDKNAMKSMFSQELSFCEKVKDKL--R 364
                I  S      Q    DEN  + P        NA++S  + E++F +KVK  +  +
Sbjct: 377 PPVSNIRASL-----QPRRKDENPSLLPGVPEPVYPNAVESDLTDEVTFFDKVKKAINNK 431

Query: 365 DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLARCEKSEELLADVMS 424
             Y EFL+ L LYT E+I +  L       +G +PDL D F  F+   EK   +    + 
Sbjct: 432 QTYNEFLKFLRLYTSEVIDKDTLVEKAEGFIGGFPDLFDWFKSFVGWEEKPLHIENIAIK 491

Query: 425 KKSL 428
           K+ L
Sbjct: 492 KQQL 495



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 42/72 (58%), Positives = 54/72 (75%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
           L   DAL+YL  VK  FQ++ + Y++FL++MKDFK+Q IDT GVI RV  LF+GH  LI 
Sbjct: 48  LNVKDALSYLDQVKIQFQNQTDVYNNFLDIMKDFKSQNIDTPGVIERVSTLFRGHPKLID 107

Query: 103 GFNTFLPKGYEI 114
           GFNTFLP+G+ I
Sbjct: 108 GFNTFLPQGFAI 119



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 44/69 (63%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDL 186
           +P+  ++A+++++++K +FQ    VY +FLDI+  ++ +N     V + V  LF+ HP L
Sbjct: 46  RPLNVKDALSYLDQVKIQFQNQTDVYNNFLDIMKDFKSQNIDTPGVIERVSTLFRGHPKL 105

Query: 187 LEEFTHFLP 195
           ++ F  FLP
Sbjct: 106 IDGFNTFLP 114


>gi|219130265|ref|XP_002185289.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217403204|gb|EEC43158.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 414

 Score =  166 bits (421), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 84/156 (53%), Positives = 110/156 (70%), Gaps = 4/156 (2%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
           L   DAL YL  VK  F+ +   Y++FL +MK+FK+Q +DT GVIARV +LF+G+  LIL
Sbjct: 4   LRVEDALLYLDDVKREFRGRPHVYNEFLGIMKNFKSQEVDTPGVIARVSKLFRGYNKLIL 63

Query: 103 GFNTFLPKGYEITLP-LEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNM 161
           GFNTFLP+GY+I+L  LE  Q    + VEF+ AI++V  IK RF  D   Y  FL+IL+ 
Sbjct: 64  GFNTFLPEGYKISLADLEQNQ---NQTVEFDHAISYVTTIKKRFVHDPSTYHQFLEILHT 120

Query: 162 YRKENKSITEVYQEVEALFQDHPDLLEEFTHFLPDS 197
           Y+KE + I EV ++V  LFQDHPDLL+EFT FLPD+
Sbjct: 121 YQKEQRGIKEVLEQVAHLFQDHPDLLKEFTFFLPDA 156



 Score =  103 bits (257), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 45/84 (53%), Positives = 62/84 (73%), Gaps = 1/84 (1%)

Query: 489 KDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSED 548
           +D + + P+ E+D S C RCTPSYR LP++Y  P    R++  A+VLND WVS+  GSE+
Sbjct: 331 EDSWYSVPLSEIDFSRCRRCTPSYRALPRDYPAPPCGDRSDEEAKVLNDIWVSLPVGSEE 390

Query: 549 -YSFKHMRKNQYEESLFRCEDDRF 571
            Y+F+HMR+N YEE+LFR ED+RF
Sbjct: 391 SYTFRHMRRNTYEETLFRVEDERF 414



 Score = 42.7 bits (99), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 20/69 (28%), Positives = 36/69 (52%)

Query: 41  QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDL 100
           Q +  + A++Y+  +K  F      Y  FLE++  ++ ++     V+ +V  LF+ H DL
Sbjct: 86  QTVEFDHAISYVTTIKKRFVHDPSTYHQFLEILHTYQKEQRGIKEVLEQVAHLFQDHPDL 145

Query: 101 ILGFNTFLP 109
           +  F  FLP
Sbjct: 146 LKEFTFFLP 154


>gi|393246912|gb|EJD54420.1| hypothetical protein AURDEDRAFT_110072 [Auricularia delicata
           TFB-10046 SS5]
          Length = 1386

 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 102/277 (36%), Positives = 155/277 (55%), Gaps = 22/277 (7%)

Query: 483 MSMYSSKDKYLAKPIQELDLSN----CERCTPSYRLLPKNYLIPSASQRTELGAEVLNDH 538
           + +  S ++  A+P Q L L++     E C PSYR LP + +  + S R EL   VLND 
Sbjct: 490 LKVMVSYNETKAEPNQPLALTDRVRVVEDCGPSYRRLPPDQVALACSGRDELARSVLNDE 549

Query: 539 WVS-VTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNN 597
           WVS  T  SED  F+  +KNQ+EE+L R E++R E D  +E++  T   +E + +KI + 
Sbjct: 550 WVSHPTWMSEDSVFQSHKKNQFEEALHRSEEERHEYDFHIEALTRTIALLEPIFQKILHM 609

Query: 598 T----IKTDGPIRVEDHFTALNLRCIERLYG-DHGLDVMDVLRKNASLALPVILTRLKQK 652
           T    +    P  +     +++LR ++++YG D G++V   L++   +A+PV+L RLKQK
Sbjct: 610 TDADRLAFKLPAGLGASSPSIHLRILKKVYGRDAGMEVALALQETPGIAIPVVLPRLKQK 669

Query: 653 QEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRK 712
            EEW R R ++NKVW EI  +N++KSLDH+   FKQ D K++ AK L  +I    E  R 
Sbjct: 670 DEEWRRARREWNKVWREIDIRNFYKSLDHQGITFKQNDKKTITAKQLVHQI----EAARA 725

Query: 713 EDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLI 749
           E        A       P L FE +D  + +D  +L+
Sbjct: 726 E--------APRTVRTGPQLAFEIADEAVLKDAMKLV 754



 Score = 90.9 bits (224), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 43/81 (53%), Positives = 52/81 (64%)

Query: 34  GGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKEL 93
           G  G  A+ L   DAL YL  VK+ F D    Y+ FL++MK+FK +++DT GVI RV  L
Sbjct: 94  GEDGAPARPLNVTDALTYLDDVKEQFTDAPGVYNRFLDIMKEFKTEQLDTPGVIERVSTL 153

Query: 94  FKGHRDLILGFNTFLPKGYEI 114
           F GH  LI GFNTFLP GY I
Sbjct: 154 FAGHPRLIQGFNTFLPAGYHI 174



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 33/74 (44%), Positives = 47/74 (63%), Gaps = 6/74 (8%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYR-KENKSITE-----VYQEVEALFQD 182
            EF  AI+F+NKIK R+  D  VY +FL IL  Y+ K+ K+ +E     +Y +V+ L  D
Sbjct: 262 AEFGHAISFINKIKARYSHDPDVYNTFLQILQTYQTKQGKNASEAQPMGIYSQVKKLLVD 321

Query: 183 HPDLLEEFTHFLPD 196
            PDL++EF  FLP+
Sbjct: 322 APDLIDEFKQFLPE 335



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 40/79 (50%)

Query: 117 PLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEV 176
           P   E   P +P+   +A+ +++ +K +F     VY  FLDI+  ++ E      V + V
Sbjct: 91  PTPGEDGAPARPLNVTDALTYLDDVKEQFTDAPGVYNRFLDIMKEFKTEQLDTPGVIERV 150

Query: 177 EALFQDHPDLLEEFTHFLP 195
             LF  HP L++ F  FLP
Sbjct: 151 STLFAGHPRLIQGFNTFLP 169


>gi|307102952|gb|EFN51217.1| hypothetical protein CHLNCDRAFT_37482 [Chlorella variabilis]
          Length = 162

 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 88/165 (53%), Positives = 109/165 (66%), Gaps = 23/165 (13%)

Query: 18  MISSRGEPSG----QTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVM 73
           M+ SR +  G    Q +    G     ++LTTNDAL+YL+ VK  F + R+ YD FLE+M
Sbjct: 1   MMRSRDDAPGVAGPQAKKPAAGEEERRERLTTNDALSYLREVKTRFANNRKVYDSFLEIM 60

Query: 74  KDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLEDEQPP--------- 124
           K FKAQ IDT GVI +VK+LFKGH +LILGFNTFLPKGYEI L   D+ PP         
Sbjct: 61  KQFKAQSIDTTGVIEKVKDLFKGHPELILGFNTFLPKGYEIRL---DDVPPSVRSWEPPS 117

Query: 125 -------PKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMY 162
                  PK PVEF++AI++VNKIK RF  D+ VYK+FL+ILNMY
Sbjct: 118 MRVPVAAPKPPVEFDQAISYVNKIKMRFANDERVYKAFLEILNMY 162



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/63 (36%), Positives = 43/63 (68%)

Query: 133 EAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTH 192
           +A++++ ++KTRF  +  VY SFL+I+  ++ ++   T V ++V+ LF+ HP+L+  F  
Sbjct: 34  DALSYLREVKTRFANNRKVYDSFLEIMKQFKAQSIDTTGVIEKVKDLFKGHPELILGFNT 93

Query: 193 FLP 195
           FLP
Sbjct: 94  FLP 96


>gi|403411392|emb|CCL98092.1| predicted protein [Fibroporia radiculosa]
          Length = 1337

 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 165/639 (25%), Positives = 270/639 (42%), Gaps = 120/639 (18%)

Query: 130 EFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI--TEVYQEVEALFQDHPDLL 187
           EF  AI F+NKIK RF+ D   YK FL+IL+ Y+KE K +  ++V+ +V+ LF+D PDL+
Sbjct: 307 EFNHAIQFLNKIKVRFEDDPETYKQFLEILHAYQKEQKHLHDSQVFAQVQMLFKDAPDLM 366

Query: 188 EEFTHFLPDS-------SGAASIHYVPSGRNSILRDRSSAMPTARQVHVDKKERAMASHA 240
            EF  FLP++       SG   I   P+G  S       A PT+     DK  +A +   
Sbjct: 367 SEFRDFLPEALAPSSHHSGLVGILPHPTGGASPWSQAEVAAPTS-----DKATKAPSRRR 421

Query: 241 DRDLSVDRPDPDH---DRVLLKSDKDQRRRGEKERERRDDHRRERERDDRDFENDVNRDF 297
            R +  + P        R++ ++  +Q+       E +                 V +  
Sbjct: 422 KRAVEKEAPGTQKGPGGRIVKRAKPNQK------PEPQSPKFAPFPVPSTPPPPHVQQSL 475

Query: 298 SMQRFPHKRKSARKIEDSTAEPLHQGGEGDENFGMHPVSSSYDDKNAMKSMFSQELSFCE 357
            +   PH +    ++    A  L+  G         PVS+            S+EL F +
Sbjct: 476 GIP--PHLQNVHSRMLQPPAIALNGSGA--------PVST------------SEELLFFD 513

Query: 358 KVKDKLRD--DYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLARCEKS 415
           + K  L     Y EFL+ L+L+ K++I    L   V   LG   +LM  F   ++  +K 
Sbjct: 514 RAKKALESGGTYDEFLKLLNLFAKDVIDAKTLVDRVEIFLGEG-ELMAQFKDMMSWDDKY 572

Query: 416 EELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRLDKSVAFV 475
             +            E   P S++    D    R  DDG                     
Sbjct: 573 GNI------------EYGPPGSIRTGPPDPYTARPPDDG--------------------- 599

Query: 476 NKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVL 535
               GP          Y   P  E+ L+   R    + +L   +              V 
Sbjct: 600 ---QGP---------SYRRFPESEIRLACSGRGQLEWSVLNDEW--------------VS 633

Query: 536 NDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKIN 595
           +  W S  SG     F   +KN +E++L + E++R E  + +E +  T   +E L  +I+
Sbjct: 634 HPTWASEESG-----FVAHKKNSFEDTLHKSEEERHEYQVHIEGLQRTIGVLEPLDARID 688

Query: 596 NNTIKTDGPIRVEDHF----TALNLRCIERLYG-DHGLDVMDVLRKNASLALPVILTRLK 650
             + +     R++        A+  R I+++YG D+  ++M  L++  S+A+PV+L RLK
Sbjct: 689 EMSPEERTQFRLKPSLGGTCPAIYERTIKKIYGRDNVAEIMKALQECPSVAVPVVLKRLK 748

Query: 651 QKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKK 710
           QK  EW R + +++K W E+ +KN++K+LDH+   FK  D K +  K    +I+ +   +
Sbjct: 749 QKDVEWRRAQREWSKTWREVDAKNFYKALDHQGIIFKANDKKCITTKHFVQDIESVKALQ 808

Query: 711 RKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLI 749
            K  D       G + S    LE+E  D  + +D  +LI
Sbjct: 809 TKAHD---KKGKGMQDSFGYQLEYELQDTGVLQDSLKLI 844



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 46/74 (62%), Positives = 53/74 (71%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
           L   DAL+YL AVK  FQDK + Y+ FL++MKDFK+Q IDT GVI RV  LF G+  LI 
Sbjct: 113 LNVTDALSYLDAVKMQFQDKPDVYNHFLDIMKDFKSQVIDTPGVIERVSMLFHGNPYLIQ 172

Query: 103 GFNTFLPKGYEITL 116
           GFNTFLP GY I L
Sbjct: 173 GFNTFLPPGYRIEL 186



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 39/69 (56%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDL 186
           +P+   +A+++++ +K +FQ    VY  FLDI+  ++ +      V + V  LF  +P L
Sbjct: 111 RPLNVTDALSYLDAVKMQFQDKPDVYNHFLDIMKDFKSQVIDTPGVIERVSMLFHGNPYL 170

Query: 187 LEEFTHFLP 195
           ++ F  FLP
Sbjct: 171 IQGFNTFLP 179



 Score = 44.3 bits (103), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 2/68 (2%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQR--IDTAGVIARVKELFKGHRDLILG 103
           N A+ +L  +K  F+D  E Y  FLE++  ++ ++  +  + V A+V+ LFK   DL+  
Sbjct: 309 NHAIQFLNKIKVRFEDDPETYKQFLEILHAYQKEQKHLHDSQVFAQVQMLFKDAPDLMSE 368

Query: 104 FNTFLPKG 111
           F  FLP+ 
Sbjct: 369 FRDFLPEA 376


>gi|384494954|gb|EIE85445.1| hypothetical protein RO3G_10155 [Rhizopus delemar RA 99-880]
          Length = 842

 Score =  163 bits (413), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 91/201 (45%), Positives = 122/201 (60%), Gaps = 18/201 (8%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
           L   DAL YL  VK  F D+   Y++FL++MKDFK+Q IDT GVI RV  LFKGH  L+ 
Sbjct: 84  LNVVDALGYLDQVKSCFADQPNVYNEFLDIMKDFKSQAIDTPGVIDRVSHLFKGHPILVS 143

Query: 103 GFNTFLPKGYEITL----PLEDEQPPP------KKPVEFEEAINFVNKIKTRFQGDDHVY 152
           GFNTFLP GY I      P++     P      + PVEF +AI++VN+IKTRF     VY
Sbjct: 144 GFNTFLPAGYHIECSKENPMKIITSNPYSINEARPPVEFNQAISYVNRIKTRFSQKPEVY 203

Query: 153 KSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNS 212
           K FLDIL+ Y+K+ K I EVY  ++ LF  H DLLE+F  FLP+          P G   
Sbjct: 204 KQFLDILHTYQKDLKPIREVYTNIQYLFAGHDDLLEDFKQFLPEVQE-------PRGFKR 256

Query: 213 ILRDRSSAMPT-ARQVHVDKK 232
           +++ ++S++ T  R+ ++ KK
Sbjct: 257 VMKTQASSIHTKKRKTYMTKK 277



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 75/230 (32%), Positives = 130/230 (56%), Gaps = 11/230 (4%)

Query: 486 YSSKDKYLAKPIQ---ELDLSNCERC--TPSYRLLPKNYLIPSASQRTELGAEVLNDHWV 540
           Y  KDK +  P     + DL++CE    +PSYR++PK +     S R  L  EVLND +V
Sbjct: 373 YEPKDKPVEIPHHPPVKPDLNDCEAVEDSPSYRIVPKEWQTQPCSGRDALCFEVLNDIYV 432

Query: 541 SVTS-GSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTI 599
           S     ++D  F   ++N YE+++ R E++R++ D+ +++       +E + +KI   T 
Sbjct: 433 SHPRWATDDSVFIGSKRNFYEDAMHRNEEERYDFDVNIDANQNVIALLEPIAQKIEKMTD 492

Query: 600 KTDGPIRVEDHF----TALNLRCIERLYG-DHGLDVMDVLRKNASLALPVILTRLKQKQE 654
           +     R+E        ++  R I+++YG + G +++D++  + +  +P +LTRLKQK  
Sbjct: 493 EEKNTFRLEPGLGGETISIYERIIKKIYGKERGEELVDLIYTSPAAVIPTLLTRLKQKDS 552

Query: 655 EWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIK 704
           EW + + ++NK W E   KNY+KSLD++   FK  D K L  K++ AE++
Sbjct: 553 EWKKAQKEWNKQWREQDLKNYYKSLDYQCNSFKSNDRKVLSVKSMIAEVE 602



 Score = 44.7 bits (104), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 38/69 (55%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDL 186
           +P+   +A+ +++++K+ F    +VY  FLDI+  ++ +      V   V  LF+ HP L
Sbjct: 82  RPLNVVDALGYLDQVKSCFADQPNVYNEFLDIMKDFKSQAIDTPGVIDRVSHLFKGHPIL 141

Query: 187 LEEFTHFLP 195
           +  F  FLP
Sbjct: 142 VSGFNTFLP 150


>gi|357502311|ref|XP_003621444.1| SIN3 component histone deacetylase complex [Medicago truncatula]
 gi|355496459|gb|AES77662.1| SIN3 component histone deacetylase complex [Medicago truncatula]
          Length = 162

 Score =  163 bits (412), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 78/163 (47%), Positives = 116/163 (71%), Gaps = 9/163 (5%)

Query: 35  GGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELF 94
           G     +K+T ++A  YL  +KD F+D++ KY +FL V+KDF+ +RID  GV+ARVKE F
Sbjct: 7   GSSAAKKKITYHEAKMYLNEIKDAFKDEKHKYYEFLRVLKDFEKRRIDLEGVVARVKEFF 66

Query: 95  KGHRDLILGFNTFLPKGYEITLPLEDEQPPPKKP--VEFEEAINFVNKIKTRFQGDDHVY 152
           +GH +L+L F TFLP G+ I+L       PPKKP  +  E A+ +++K+KTRF+ +  VY
Sbjct: 67  QGHDELLLKFQTFLPDGFVISL-------PPKKPKVITKEFALKYISKVKTRFRRNPQVY 119

Query: 153 KSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLP 195
           +SFLDI+ M++ ++KS  E++Q V ++FQ H DL++EFTHFLP
Sbjct: 120 ESFLDIMQMFKNDHKSAKELHQTVISIFQGHQDLIDEFTHFLP 162



 Score = 47.4 bits (111), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 39/71 (54%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           KK + + EA  ++N+IK  F+ + H Y  FL +L  + K    +  V   V+  FQ H +
Sbjct: 12  KKKITYHEAKMYLNEIKDAFKDEKHKYYEFLRVLKDFEKRRIDLEGVVARVKEFFQGHDE 71

Query: 186 LLEEFTHFLPD 196
           LL +F  FLPD
Sbjct: 72  LLLKFQTFLPD 82


>gi|223997286|ref|XP_002288316.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220975424|gb|EED93752.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 156

 Score =  162 bits (411), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 81/155 (52%), Positives = 108/155 (69%), Gaps = 2/155 (1%)

Query: 41  QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDL 100
           ++L   DAL YL  VK  F D+   Y++FL++MK FK+Q+IDT GVI RV  LF G++ L
Sbjct: 4   RELRVEDALMYLDQVKMEFGDRPHIYNEFLDIMKTFKSQQIDTPGVIQRVSALFHGNKRL 63

Query: 101 ILGFNTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILN 160
           +LGFNTFLP+GY+I   L+  Q   ++PVEF+ AIN+V  IK RF     +Y+ FL+IL+
Sbjct: 64  VLGFNTFLPEGYKIE--LQQAQAQREQPVEFDHAINYVTTIKKRFAAHPEIYRKFLEILH 121

Query: 161 MYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLP 195
            Y+KE + I EV  EV  LF DH DLL+EFT+FLP
Sbjct: 122 TYQKEQRGIKEVLDEVSVLFADHADLLKEFTYFLP 156



 Score = 46.6 bits (109), Expect = 0.069,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 38/70 (54%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDL 186
           + +  E+A+ +++++K  F    H+Y  FLDI+  ++ +      V Q V ALF  +  L
Sbjct: 4   RELRVEDALMYLDQVKMEFGDRPHIYNEFLDIMKTFKSQQIDTPGVIQRVSALFHGNKRL 63

Query: 187 LEEFTHFLPD 196
           +  F  FLP+
Sbjct: 64  VLGFNTFLPE 73


>gi|323448283|gb|EGB04184.1| hypothetical protein AURANDRAFT_39114 [Aureococcus anophagefferens]
          Length = 956

 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 100/308 (32%), Positives = 164/308 (53%), Gaps = 23/308 (7%)

Query: 492 YLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDY-S 550
           + + P+ E+D S C+  TPSYR LP +   P    R++L   VLND WVS   GSE+  S
Sbjct: 338 WASTPLHEIDFSRCKHGTPSYRALPTSMSHPRCGGRSDLDQNVLNDVWVSQPVGSEETNS 397

Query: 551 FKHMRKNQYEESLFRCEDDRFELDML-------LESVNVTTKRVEELL----------EK 593
           FKH+RKN YEE LF+CED+RFELDM+       + S+ +    V++ L          E 
Sbjct: 398 FKHVRKNVYEEELFKCEDERFELDMITDSNAAAIASLELINTAVQQSLRSTVSPPCKDEN 457

Query: 594 INNNTIKTDGPIRVEDHFTALNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQ 653
           I N+++   G         A +L  I R+YG+HG ++++++ K+    LP++L RLKQK 
Sbjct: 458 IINDSMSLVGFAIDSVALYATHLNAILRVYGEHGAELLELMYKSPQAVLPMVLKRLKQKG 517

Query: 654 EEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKE 713
            EW + +   +  W E  S+N   + DHRSF+  Q++ KS+  + L  ++ +++  + + 
Sbjct: 518 MEWCKKKESISASWKEQLSQNIVHAADHRSFHSHQKEQKSVLPRHLVQDLIDVNSSQIER 577

Query: 714 DDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLIKYSCGEMCTTEQLDK--VMKIWTT 771
           + +    ++ +   ++ HL   ++   IH  L+ LI Y   E     ++DK  V+  W  
Sbjct: 578 NTMHSTESSSDNSEMLLHL--GHNANAIHLTLFHLI-YDVLEQSLMSRVDKNRVLIFWRH 634

Query: 772 FLEPMLGV 779
           F    L +
Sbjct: 635 FFARFLDI 642



 Score =  150 bits (379), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 85/201 (42%), Positives = 111/201 (55%), Gaps = 44/201 (21%)

Query: 41  QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDL 100
           ++L   DAL YL  VK  F DK E Y++FL++MK+FKAQ IDT GVI +V  LF G+  L
Sbjct: 9   RELKVEDALLYLDQVKMAFGDKPEIYNEFLDIMKNFKAQEIDTPGVIQQVSHLFHGYSKL 68

Query: 101 ILGFNTFLPKGYEITLPLEDEQP----------------PPKKPVEFEE----------- 133
           ILGFNTFLP GY+I LP+E +                   P  P + E+           
Sbjct: 69  ILGFNTFLPDGYKIELPIEGDSSAMTVITPSGVSASIAGAPLAPSKLEKTHKIGGAPYLC 128

Query: 134 ---------------AINF--VNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEV 176
                          A  F  V  IK RF  +   YK+FL+IL+ Y+KE +SI +V ++V
Sbjct: 129 TPRIKPYRRRCQSYRAAYFQQVTTIKKRFAHEPETYKAFLEILHTYQKEQRSIKDVLEQV 188

Query: 177 EALFQDHPDLLEEFTHFLPDS 197
             LF DHPDLL+EFT+FLPD+
Sbjct: 189 SQLFADHPDLLKEFTYFLPDA 209


>gi|241948085|ref|XP_002416765.1| Sin3p-Rpd3p histone-deacetylase complex, DNA binding subunit,
           putative [Candida dubliniensis CD36]
 gi|223640103|emb|CAX44349.1| Sin3p-Rpd3p histone-deacetylase complex, DNA binding subunit,
           putative [Candida dubliniensis CD36]
          Length = 1415

 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/311 (33%), Positives = 160/311 (51%), Gaps = 19/311 (6%)

Query: 500 LDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMRKNQ 558
           L+LS C+   PSYR LPK       S R E+  EVLND WV   T  SED  F   RKNQ
Sbjct: 597 LELSLCKAYGPSYRQLPKAETYMPCSGRDEMCWEVLNDEWVGHPTWASEDSGFIAHRKNQ 656

Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TAL 614
           YEE LF+ E++R E D  +ES   T + +E +  +I N T +     ++        + +
Sbjct: 657 YEEILFKIEEERLEFDYYMESNLRTIQILETIANRIANMTPEQKATFKLPPGLGHNSSTI 716

Query: 615 NLRCIERLY-GDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSK 673
             + I ++Y  D G +V+D L +N S+A+P++L RLKQK EEW R + ++NKVW E+  K
Sbjct: 717 YKKIIRKIYDKDRGFEVIDALHENPSIAVPIVLKRLKQKDEEWKRAQREWNKVWREMEQK 776

Query: 674 NYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLE 733
            ++KSLDH    FKQ D K L  K L +EI  +  K  +++  L  +    +      L 
Sbjct: 777 VFYKSLDHVGLTFKQADKKLLTVKQLVSEISTV--KVEQQNKRLHPLTPKPQE----QLN 830

Query: 734 FEYSDPDIHEDLYQLIKYSCGEMCTTEQLD--KVMKIWTTFLEPMLGVPSRPQGAEDTED 791
           +E++D ++  D+ +L +       T    D  K+++    F+     +P+     E  E 
Sbjct: 831 YEFNDNEVLFDILKLAEVFINRSSTYSAHDREKLLQFLQFFMSLFFSIPT-----ETIET 885

Query: 792 VVKAKSHTVKS 802
            + A+    KS
Sbjct: 886 ALAARGRIEKS 896



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 52/108 (48%), Positives = 68/108 (62%), Gaps = 6/108 (5%)

Query: 24  EPSGQTQVVGGGGGGGA------QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFK 77
           +P+ QT  V GG    +      + L   DAL+YL  VK  F ++ E Y++FL++MKDFK
Sbjct: 129 QPAPQTSPVIGGVPNRSTTTNVYRPLNVKDALSYLDQVKVQFSNQAEVYNNFLDIMKDFK 188

Query: 78  AQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLEDEQPPP 125
           +Q IDT GVI RV  LF+GH +LI GFNTFLP GY+I   L+   P P
Sbjct: 189 SQSIDTPGVIDRVSTLFRGHPNLIQGFNTFLPPGYKIECSLDPSDPNP 236



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 38/70 (54%), Positives = 50/70 (71%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           V F  AI++VNKIKTRF     +YK FL+IL  Y++E K I EVY++V  LF + PDLL+
Sbjct: 305 VGFNHAISYVNKIKTRFASQPDIYKQFLEILQTYQREQKQIAEVYEQVTVLFANSPDLLD 364

Query: 189 EFTHFLPDSS 198
           +F  FLPD+S
Sbjct: 365 DFKQFLPDTS 374



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 43/69 (62%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDL 186
           +P+  ++A+++++++K +F     VY +FLDI+  ++ ++     V   V  LF+ HP+L
Sbjct: 152 RPLNVKDALSYLDQVKVQFSNQAEVYNNFLDIMKDFKSQSIDTPGVIDRVSTLFRGHPNL 211

Query: 187 LEEFTHFLP 195
           ++ F  FLP
Sbjct: 212 IQGFNTFLP 220



 Score = 45.1 bits (105), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 21/72 (29%), Positives = 39/72 (54%)

Query: 38  GGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGH 97
           G + ++  N A++Y+  +K  F  + + Y  FLE+++ ++ ++   A V  +V  LF   
Sbjct: 300 GASGQVGFNHAISYVNKIKTRFASQPDIYKQFLEILQTYQREQKQIAEVYEQVTVLFANS 359

Query: 98  RDLILGFNTFLP 109
            DL+  F  FLP
Sbjct: 360 PDLLDDFKQFLP 371


>gi|344304503|gb|EGW34735.1| transcription regulatory protein [Spathaspora passalidarum NRRL
           Y-27907]
          Length = 1260

 Score =  161 bits (408), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 105/297 (35%), Positives = 158/297 (53%), Gaps = 26/297 (8%)

Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMRKN 557
           +L+LS C+   PSYR LPK       S R E+  EVLND WV   T  SED  F   RKN
Sbjct: 427 QLELSLCKAYGPSYRQLPKAETYMPCSGRDEMCWEVLNDEWVGHPTWASEDSGFIAHRKN 486

Query: 558 QYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNT----IKTDGPIRVEDHFTA 613
           QYEE LF+ E++R E D  +ES   T + +E +  +I N T    +    P  +  +   
Sbjct: 487 QYEEILFKIEEERLEFDYYMESNLRTIQILETIANRIANMTPEQKVAFKLPPGLGHNSQT 546

Query: 614 LNLRCIERLYG-DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYS 672
           +  + I ++YG D G +V+D L +N ++A+P++L RLKQK EEW R + ++NKVW ++  
Sbjct: 547 IYKKVIRKIYGKDRGFEVIDALHENPAIAVPIVLKRLKQKDEEWKRAQREWNKVWRDMEQ 606

Query: 673 KNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHL 732
           K ++KSLDH    FKQ D K L AK L +EI  +  K  +++  L  +    +      L
Sbjct: 607 KVFYKSLDHLGLTFKQADKKLLTAKQLVSEISTV--KVEQQNKRLHPLTPKPQE----QL 660

Query: 733 EFEYSDPDIHEDLYQLI--------KYSCGEMCTTEQLDKVMKIWTTFLEPMLGVPS 781
            + + D +I  D+ +L          YS G+    E+L + ++    F+    G+PS
Sbjct: 661 NYTFEDTEILFDIVKLADVFINRSSNYSAGD---GEKLSQFLQF---FVSLFFGIPS 711



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 39/70 (55%), Positives = 51/70 (72%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           VEF  AI++VNKIKTRF      YK FL+IL  Y++E K I+EVY++V  LF + PDLL+
Sbjct: 130 VEFNHAISYVNKIKTRFANQPDTYKQFLEILQTYQREQKPISEVYEQVTVLFANSPDLLD 189

Query: 189 EFTHFLPDSS 198
           +F  FLPD+S
Sbjct: 190 DFKQFLPDTS 199



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 33/53 (62%), Positives = 38/53 (71%)

Query: 73  MKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLEDEQPPP 125
           MKDFK+Q IDT GVI RV  LF+GH +LI GFNTFLP GY+I   L+   P P
Sbjct: 1   MKDFKSQSIDTPGVIDRVSTLFQGHPNLIQGFNTFLPPGYKIECSLDPSDPNP 53



 Score = 45.8 bits (107), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 40/67 (59%), Gaps = 3/67 (4%)

Query: 347 SMFSQELSFCEKVKDKL--RDDYQEFLRCLHLYTKEIITRSELQSLVGDLLGR-YPDLMD 403
           S  S+E+SF +KVK  +  +  Y +FL+ L+L+T++II +  L   V   +G  +PDL +
Sbjct: 344 SSLSEEISFFDKVKKAIGNKQSYSDFLKILNLFTQDIIDKDTLVERVQGFIGETHPDLFN 403

Query: 404 GFNGFLA 410
            F  F+ 
Sbjct: 404 WFKMFVG 410



 Score = 43.9 bits (102), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 20/71 (28%), Positives = 38/71 (53%)

Query: 39  GAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHR 98
           G   +  N A++Y+  +K  F ++ + Y  FLE+++ ++ ++   + V  +V  LF    
Sbjct: 126 GGSNVEFNHAISYVNKIKTRFANQPDTYKQFLEILQTYQREQKPISEVYEQVTVLFANSP 185

Query: 99  DLILGFNTFLP 109
           DL+  F  FLP
Sbjct: 186 DLLDDFKQFLP 196


>gi|448520190|ref|XP_003868245.1| Sin3 protein [Candida orthopsilosis Co 90-125]
 gi|380352584|emb|CCG22811.1| Sin3 protein [Candida orthopsilosis]
          Length = 1428

 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 100/271 (36%), Positives = 145/271 (53%), Gaps = 12/271 (4%)

Query: 500 LDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMRKNQ 558
           L+LS C+   PSYR LPK       S R E+  EVLND WV   T  SED  F   RKNQ
Sbjct: 652 LELSLCKAYGPSYRQLPKAETFMPCSGRDEMCWEVLNDEWVGHPTWASEDSGFIAHRKNQ 711

Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDG----PIRVEDHFTAL 614
           YEE LF+ E++R E D  +ES   T + +E +  +I N T +       P  +  + T +
Sbjct: 712 YEEILFKIEEERLEFDYYMESNLRTIQILETIANRIANMTPEQKANFKLPPGLGHNSTTI 771

Query: 615 NLRCIERLY-GDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSK 673
             + I ++Y  D G +V+D L +N ++A+P++L RLKQK EEW R + ++NKVW E+  K
Sbjct: 772 YKKVIRKIYDKDRGFEVIDALHENPAIAVPIVLKRLKQKDEEWKRAQREWNKVWREMEQK 831

Query: 674 NYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLE 733
            ++KSLDH    FKQ D K L AK L +EI  +  K  +++  L  +    +      L 
Sbjct: 832 VFYKSLDHLGLTFKQADKKLLTAKQLVSEISTV--KVEQQNKRLHPLTPKPQE----QLN 885

Query: 734 FEYSDPDIHEDLYQLIKYSCGEMCTTEQLDK 764
           +E+ D D+  D+ +L         T    D+
Sbjct: 886 YEFGDNDVLFDILKLANVFINRSSTYSAYDR 916



 Score = 98.6 bits (244), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 46/83 (55%), Positives = 58/83 (69%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
           L   DAL+YL  VK  F ++ E Y++FL++MKDFK+Q IDT GVI RV  LFKGH +LI 
Sbjct: 213 LNVKDALSYLDQVKIQFYNQAEVYNNFLDIMKDFKSQSIDTPGVIDRVSTLFKGHPNLIQ 272

Query: 103 GFNTFLPKGYEITLPLEDEQPPP 125
           GFNTFLP GY+I   ++   P P
Sbjct: 273 GFNTFLPPGYKIECSMDPSDPNP 295



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 37/70 (52%), Positives = 51/70 (72%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           ++F  AI++VNKIKTRF     +YK FL+IL  Y++E K I EVY++V  LF + PDLL+
Sbjct: 356 IDFNHAISYVNKIKTRFANQPDIYKHFLEILQTYQREQKPIAEVYEQVTELFSNCPDLLD 415

Query: 189 EFTHFLPDSS 198
           +F  FLPD+S
Sbjct: 416 DFKQFLPDTS 425



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 43/69 (62%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDL 186
           +P+  ++A+++++++K +F     VY +FLDI+  ++ ++     V   V  LF+ HP+L
Sbjct: 211 RPLNVKDALSYLDQVKIQFYNQAEVYNNFLDIMKDFKSQSIDTPGVIDRVSTLFKGHPNL 270

Query: 187 LEEFTHFLP 195
           ++ F  FLP
Sbjct: 271 IQGFNTFLP 279



 Score = 47.0 bits (110), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 44/80 (55%), Gaps = 4/80 (5%)

Query: 37  GGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKG 96
             G+ ++  N A++Y+  +K  F ++ + Y  FLE+++ ++ ++   A V  +V ELF  
Sbjct: 350 ANGSGQIDFNHAISYVNKIKTRFANQPDIYKHFLEILQTYQREQKPIAEVYEQVTELFSN 409

Query: 97  HRDLILGFNTFLP----KGY 112
             DL+  F  FLP    +GY
Sbjct: 410 CPDLLDDFKQFLPDTSNQGY 429



 Score = 45.4 bits (106), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 3/88 (3%)

Query: 344 AMKSMFSQELSFCEKVKDKL--RDDYQEFLRCLHLYTKEIITRSELQSLVGDLLG-RYPD 400
           A  S  S+E+SF +K+K  L  +  Y EFL+ L+L+T++II +  L   V   LG    D
Sbjct: 565 AKSSSLSEEISFFDKIKRALGNKQTYSEFLKLLNLFTQDIIDKETLVERVDAFLGDSNAD 624

Query: 401 LMDGFNGFLARCEKSEELLADVMSKKSL 428
           L + F  F+   +K + L      K +L
Sbjct: 625 LFEWFKLFVGYEDKPQNLENITFKKHAL 652



 Score = 41.6 bits (96), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 25/90 (27%), Positives = 39/90 (43%), Gaps = 3/90 (3%)

Query: 349 FSQELSFCEKVKDKLR---DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGF 405
           F+  +S+  K+K +     D Y+ FL  L  Y +E    +E+   V +L    PDL+D F
Sbjct: 358 FNHAISYVNKIKTRFANQPDIYKHFLEILQTYQREQKPIAEVYEQVTELFSNCPDLLDDF 417

Query: 406 NGFLARCEKSEELLADVMSKKSLWNEGRIP 435
             FL            V  K  + N  ++P
Sbjct: 418 KQFLPDTSNQGYAQQQVQEKHFVGNGNQLP 447


>gi|150866255|ref|XP_001385789.2| transcription regulatory protein [Scheffersomyces stipitis CBS
           6054]
 gi|149387511|gb|ABN67760.2| transcription regulatory protein [Scheffersomyces stipitis CBS
           6054]
          Length = 1228

 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 110/321 (34%), Positives = 170/321 (52%), Gaps = 22/321 (6%)

Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMRKN 557
           +L+LS C+   PSYR LPK       S R E+  EVLND WV   T  SED  F   RKN
Sbjct: 414 QLELSLCKAYGPSYRQLPKAETYMPCSGRDEMCWEVLNDEWVGHPTWASEDSGFIAHRKN 473

Query: 558 QYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDG----PIRVEDHFTA 613
           QYEE LF+ E++R E D  +ES   T + +E +  +I N T +       P  +  + T 
Sbjct: 474 QYEEILFKIEEERLEFDYYMESNLRTIQILETIANRIANMTPEQKANFKLPPGLGHNSTT 533

Query: 614 LNLRCIERLY-GDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYS 672
           +  + I ++Y  D G +V+D L +N ++A+P++L RLKQK EEW R + ++NKVW E+  
Sbjct: 534 IYKKVIRKIYDKDRGFEVIDALHENPAIAVPIVLKRLKQKDEEWKRAQREWNKVWREMEQ 593

Query: 673 KNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHL 732
           K ++KSLDH    FKQ D K L AK L +EI  +  K  +++  L  +    +      L
Sbjct: 594 KVFYKSLDHLGLTFKQADKKLLTAKQLVSEISSV--KVEQQNKRLHPLTPKPQE----QL 647

Query: 733 EFEYSDPDIHEDLYQL--IKYSCGEMCTTEQLDKVMKIWTTFLEPMLGVPSRPQGAEDTE 790
            + + D DI +D+ +L  +  +     ++   DK+ + +  F+    G+P        TE
Sbjct: 648 SYVFKDYDILKDILKLADVFINRSSNYSSNDRDKLTQFFQFFVSLFFGIP--------TE 699

Query: 791 DVVKAKSHTVKSRAASVGDSD 811
           D+ +A +   KS   +  ++D
Sbjct: 700 DIERALTSRGKSEKTTADETD 720



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 38/70 (54%), Positives = 51/70 (72%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           +EF  AI++VNKIKTRF     +YK FL+IL  Y++E K I EVY++V  LF + PDLL+
Sbjct: 117 IEFNHAISYVNKIKTRFANQPDIYKQFLEILQTYQREQKPIAEVYEQVTVLFANSPDLLD 176

Query: 189 EFTHFLPDSS 198
           +F  FLPD+S
Sbjct: 177 DFKQFLPDTS 186



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/53 (64%), Positives = 38/53 (71%)

Query: 73  MKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLEDEQPPP 125
           MKDFK+Q IDT GVI RV  LF+GHR+LI GFNTFLP GY I   L+   P P
Sbjct: 1   MKDFKSQSIDTPGVIDRVSTLFRGHRNLIQGFNTFLPPGYRIECSLDPSDPNP 53



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 3/75 (4%)

Query: 347 SMFSQELSFCEKVKDKL--RDDYQEFLRCLHLYTKEIITRSELQSLVGDLLG-RYPDLMD 403
           S  S+E+SF +KVK  +  +  Y +FL+ L+LY++EII +  L   V   +G  +PDL +
Sbjct: 331 SSLSEEISFFDKVKKAIGNKQSYNDFLKILNLYSQEIIDKRTLVERVNGFIGDSHPDLFN 390

Query: 404 GFNGFLARCEKSEEL 418
            F  F+   EK + +
Sbjct: 391 WFKSFVGYEEKPQHI 405



 Score = 46.6 bits (109), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 3/78 (3%)

Query: 32  VGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVK 91
           V   GGG   ++  N A++Y+  +K  F ++ + Y  FLE+++ ++ ++   A V  +V 
Sbjct: 109 VAENGGG---QIEFNHAISYVNKIKTRFANQPDIYKQFLEILQTYQREQKPIAEVYEQVT 165

Query: 92  ELFKGHRDLILGFNTFLP 109
            LF    DL+  F  FLP
Sbjct: 166 VLFANSPDLLDDFKQFLP 183


>gi|366992782|ref|XP_003676156.1| hypothetical protein NCAS_0D02130 [Naumovozyma castellii CBS 4309]
 gi|342302022|emb|CCC69794.1| hypothetical protein NCAS_0D02130 [Naumovozyma castellii CBS 4309]
          Length = 1434

 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 100/256 (39%), Positives = 139/256 (54%), Gaps = 12/256 (4%)

Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMRKN 557
           +LDL  CE C PSY+ LPK       S R E+  EVLND WV      SED  F   RKN
Sbjct: 685 KLDLDLCEACGPSYKKLPKTDTFMPCSGRDEMCWEVLNDEWVGHPVWASEDSGFIAHRKN 744

Query: 558 QYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TA 613
           QYEESLF+ E++R E D  +ES   T + +E +  KI N T +     ++        + 
Sbjct: 745 QYEESLFKTEEERHEYDFCIESNLRTIQTLETIANKIGNMTNEEKKNFKLPPGLGHTSST 804

Query: 614 LNLRCIERLY-GDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYS 672
           +  + I ++Y  D G +++D+L +  +L +PV+L RLKQK EEW R + ++NKVW E+  
Sbjct: 805 IYKKVIRKVYDKDRGFEIIDLLHEEPALTVPVVLKRLKQKDEEWRRAQREWNKVWRELEQ 864

Query: 673 KNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHL 732
           K Y+KSLDH    FKQ D K L  K L +EI  I   K  + +  +       +S    L
Sbjct: 865 KVYYKSLDHLGLTFKQADKKLLTTKQLLSEISSI---KVDQTNKRIHWLTPKPKS---QL 918

Query: 733 EFEYSDPDIHEDLYQL 748
           EF++ D DI  D+  L
Sbjct: 919 EFQFDDNDIFVDILGL 934



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 55/127 (43%), Positives = 77/127 (60%), Gaps = 4/127 (3%)

Query: 102 LGFNTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNM 161
           L  +TF    ++ T P  ++Q      VEF +AIN+VNKIK RF     +YK FL+IL  
Sbjct: 332 LAASTFQESNFQQT-PQPEDQSAKNAEVEFSQAINYVNKIKNRFADQPDIYKRFLEILQT 390

Query: 162 YRKENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAM 221
           Y++E K I EVY +V  LFQ  PDLL++F  FLP+SSG  S   +P  +N+ ++ R +A+
Sbjct: 391 YQREQKPINEVYSQVTVLFQHAPDLLDDFKKFLPESSGTTSTSELP--QNAGIQQR-AAI 447

Query: 222 PTARQVH 228
           PT    H
Sbjct: 448 PTPNPKH 454



 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 40/72 (55%), Positives = 52/72 (72%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
           L   DAL+YL+ VK  F  + + Y+ FL++MKDFK+Q IDT GVI RV  LF+G+  L+ 
Sbjct: 210 LNVKDALSYLEQVKYQFSQRPDIYNQFLDIMKDFKSQSIDTPGVIERVSALFRGYPMLVQ 269

Query: 103 GFNTFLPKGYEI 114
           GFNTFLP+GY I
Sbjct: 270 GFNTFLPQGYRI 281



 Score = 48.1 bits (113), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 20/69 (28%), Positives = 42/69 (60%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDL 186
           +P+  ++A++++ ++K +F     +Y  FLDI+  ++ ++     V + V ALF+ +P L
Sbjct: 208 RPLNVKDALSYLEQVKYQFSQRPDIYNQFLDIMKDFKSQSIDTPGVIERVSALFRGYPML 267

Query: 187 LEEFTHFLP 195
           ++ F  FLP
Sbjct: 268 VQGFNTFLP 276



 Score = 45.8 bits (107), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 42/86 (48%), Gaps = 4/86 (4%)

Query: 327 DENFGMHPVSSSYDDKNAMKSMFSQELSFCEKVKDKLRDD---YQEFLRCLHLYTKEIIT 383
           + NF   P       KNA +  FSQ +++  K+K++  D    Y+ FL  L  Y +E   
Sbjct: 339 ESNFQQTPQPEDQSAKNA-EVEFSQAINYVNKIKNRFADQPDIYKRFLEILQTYQREQKP 397

Query: 384 RSELQSLVGDLLGRYPDLMDGFNGFL 409
            +E+ S V  L    PDL+D F  FL
Sbjct: 398 INEVYSQVTVLFQHAPDLLDDFKKFL 423



 Score = 41.2 bits (95), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 5/76 (6%)

Query: 123 PPPKKPVEFE----EAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEA 178
           P P +P+E+     E  NF  K K +F G   VY  FL ILN+Y ++  +  E+  +VE 
Sbjct: 593 PEPTEPLEYNVSLVEETNFFEKAK-KFIGTKQVYTEFLKILNLYSQDLLTTDELCVKVEY 651

Query: 179 LFQDHPDLLEEFTHFL 194
               + +L   F +F+
Sbjct: 652 YLGSNEELFTWFKNFV 667


>gi|255712825|ref|XP_002552695.1| KLTH0C10956p [Lachancea thermotolerans]
 gi|238934074|emb|CAR22257.1| KLTH0C10956p [Lachancea thermotolerans CBS 6340]
          Length = 1433

 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 94/230 (40%), Positives = 133/230 (57%), Gaps = 9/230 (3%)

Query: 486 YSSKDKYLAKPIQE---LDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS- 541
           Y  K K++   I E   LDL  CE C PSY+ LPK       S R E+  EVLND WV  
Sbjct: 644 YVEKPKHIENVIHEKHRLDLDLCEACFPSYKKLPKADTFMPCSGRDEMCWEVLNDEWVGH 703

Query: 542 VTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKT 601
               SED  F   RKNQYEE+LF+ E++R E D  +E+   T + +E +  KI+N T + 
Sbjct: 704 PVWASEDSGFIAHRKNQYEETLFKIEEERHEYDYYIEANLRTIQLLETIANKISNMTPEE 763

Query: 602 DGPIRVEDHF--TALNL--RCIERLY-GDHGLDVMDVLRKNASLALPVILTRLKQKQEEW 656
               ++      T++ +  + I ++Y  D G +++D L +N ++++P+IL RLKQK EEW
Sbjct: 764 KQAFKLPPGLGHTSMTIYKKVIRKVYDKDRGFEIIDALHENPAVSVPIILKRLKQKDEEW 823

Query: 657 ARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEI 706
            R + ++NKVW E+  K ++KSLDH    FKQ D K L AK L +EI  I
Sbjct: 824 RRAQREWNKVWRELEQKVFYKSLDHLGLTFKQADKKLLTAKQLISEISSI 873



 Score = 89.4 bits (220), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 41/76 (53%), Positives = 54/76 (71%)

Query: 125 PKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHP 184
           P   VEF  AI++VNKIKTRF     +YK FL+IL  Y++E K I EVY +V +LFQ+ P
Sbjct: 330 PSGDVEFSHAISYVNKIKTRFADQPEIYKHFLEILQTYQREQKPIHEVYAQVTSLFQNAP 389

Query: 185 DLLEEFTHFLPDSSGA 200
           DLL++F  FLPD++ A
Sbjct: 390 DLLDDFKKFLPDATAA 405



 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 41/81 (50%), Positives = 55/81 (67%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
           L   DAL+YL+ VK  F ++ + Y+ FL++MKD+K+Q IDT GVI R+  LFKG+  LI 
Sbjct: 145 LNFKDALSYLEQVKFQFNNRPDVYNHFLDIMKDYKSQAIDTLGVIERISTLFKGYPILIQ 204

Query: 103 GFNTFLPKGYEITLPLEDEQP 123
           G NTFLP+GY+I   L    P
Sbjct: 205 GLNTFLPQGYKIECTLNPNDP 225



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 43/77 (55%)

Query: 119 EDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEA 178
           E  Q P  +P+ F++A++++ ++K +F     VY  FLDI+  Y+ +      V + +  
Sbjct: 135 EHVQDPSYRPLNFKDALSYLEQVKFQFNNRPDVYNHFLDIMKDYKSQAIDTLGVIERIST 194

Query: 179 LFQDHPDLLEEFTHFLP 195
           LF+ +P L++    FLP
Sbjct: 195 LFKGYPILIQGLNTFLP 211



 Score = 45.8 bits (107), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 21/62 (33%), Positives = 36/62 (58%)

Query: 48  ALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTF 107
           A++Y+  +K  F D+ E Y  FLE+++ ++ ++     V A+V  LF+   DL+  F  F
Sbjct: 339 AISYVNKIKTRFADQPEIYKHFLEILQTYQREQKPIHEVYAQVTSLFQNAPDLLDDFKKF 398

Query: 108 LP 109
           LP
Sbjct: 399 LP 400



 Score = 43.5 bits (101), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 2/70 (2%)

Query: 351 QELSFCEKVKDKL--RDDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGF 408
           +E SF ++ K  +  +  Y EFL+ L+L+++++I   EL   V   LG  P+L D F  F
Sbjct: 582 EETSFFDRAKKYMGNKQVYTEFLKILNLFSQDLIGTEELVDKVEHYLGGSPELFDWFKSF 641

Query: 409 LARCEKSEEL 418
           +   EK + +
Sbjct: 642 VNYVEKPKHI 651


>gi|395848057|ref|XP_003796677.1| PREDICTED: LOW QUALITY PROTEIN: paired amphipathic helix protein
           Sin3b [Otolemur garnettii]
          Length = 1208

 Score =  160 bits (405), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 92/237 (38%), Positives = 136/237 (57%), Gaps = 9/237 (3%)

Query: 519 YLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLE 578
           +L P+A        +VLND WVS  S SED +F   +K  YEE L RCED+RFELD++LE
Sbjct: 485 HLGPAAPSWHFFLMQVLNDTWVSFPSWSEDSTFVSSKKTPYEEQLHRCEDERFELDVVLE 544

Query: 579 SVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TALNLRCIERLYGDHGLDVMDVL 634
           +   T + +E + +K++    +     R++D        +  R I R+YGD   ++++ L
Sbjct: 545 TNLATIRVLESVQKKLSRMAPEDQEKFRLDDSLGGTSEVIQRRAIHRIYGDKAPEIIESL 604

Query: 635 RKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSL 694
           +KN   A+PV+L RLK K+EEW   +  FNK+W E Y K Y KSLDH++  FKQ D+K+L
Sbjct: 605 KKNPVTAVPVVLKRLKAKEEEWREAQQGFNKIWREQYEKAYLKSLDHQAVNFKQNDTKAL 664

Query: 695 GAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLIKY 751
            +K+L  EI+ + ++ +++          +  S  PHL F Y D  I ED   LI Y
Sbjct: 665 RSKSLLNEIESVYDEHQEQHS-----EGRSAPSSEPHLIFVYEDRQILEDAAALISY 716



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 92/231 (39%), Positives = 118/231 (51%), Gaps = 47/231 (20%)

Query: 33  GGGGGGGAQKLTTN--DALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARV 90
           G  G  G +KL  +  DAL YL  VK  F      Y+ FLE+MK+FK+Q IDT GVI RV
Sbjct: 25  GRSGSAGHEKLPVHVEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRV 84

Query: 91  KELFKGHRDLILGFNTFLPKGYEITLP-----------------------LED--EQPP- 124
            +LF  H DLI+GFN FLP GY I +P                        ED  +Q P 
Sbjct: 85  SQLFHEHPDLIVGFNAFLPLGYRIDIPKNGKLNIQSPLTNQENSHNHGDCAEDFKQQVPY 144

Query: 125 ----PKKP-----VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKEN--------- 166
               P+ P     VEF  AI++VNKIKTRF     +Y+SFL+IL+ Y+KE          
Sbjct: 145 KEDKPQVPLESDSVEFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLNTKGRPFR 204

Query: 167 -KSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRD 216
             S  EV+ EV  LF+   DLL EF  FLP++  +      P   NS+ ++
Sbjct: 205 GMSEEEVFTEVANLFRGQEDLLSEFGQFLPEAKRSLFTGNGPCEMNSVQKN 255



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 5/79 (6%)

Query: 351 QELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGF 408
           QE SF +KV+  L+    Y+ FLRC+ L+ +E+++ SEL  LV   LG++P+L   F  F
Sbjct: 304 QEFSFFDKVRRVLKSQEVYENFLRCIALFNQELVSGSELLQLVSPFLGKFPELFAQFKSF 363

Query: 409 LARCEKSEELLADVMSKKS 427
           L   E S    A  MS +S
Sbjct: 364 LGVKELS---FAPPMSDRS 379



 Score = 44.7 bits (104), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 6/70 (8%)

Query: 498 QELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVT-SGSEDYSFKHMRK 556
           +E+D ++C+R   SYR LPK Y  P  S RT +  E+  DHW     S ++DY     + 
Sbjct: 385 REIDYASCKRIGSSYRALPKTYQQPKCSGRTAICKEL--DHWTXFQGSWTDDYCMSRFKS 442

Query: 557 NQYEESLFRC 566
             +   + RC
Sbjct: 443 TCW---ILRC 449


>gi|149243908|ref|XP_001526544.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146448938|gb|EDK43194.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 1353

 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 97/255 (38%), Positives = 143/255 (56%), Gaps = 12/255 (4%)

Query: 500 LDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMRKNQ 558
           L+LS C+   PSYR LPK       S R E+  EVLND WV   T  SED  F   RKNQ
Sbjct: 596 LELSLCKAYGPSYRQLPKAETFMPCSGRDEMCWEVLNDEWVGHPTWASEDSGFIAHRKNQ 655

Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDG----PIRVEDHFTAL 614
           YEE LF+ E++R E D  +ES   T + +E +  +I N T +       P  +  + T +
Sbjct: 656 YEEVLFKIEEERLEFDYYMESNLRTIQILETIANRIANMTPEQKANFKLPPGLGHNSTTI 715

Query: 615 NLRCIERLY-GDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSK 673
             + I ++Y  D G +V+D L +N S+A+P++L RLKQK EEW R + ++NKVW E+  K
Sbjct: 716 YKKVIRKIYDKDRGFEVIDALHENPSIAVPIVLKRLKQKDEEWKRAQREWNKVWREMEQK 775

Query: 674 NYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLE 733
            ++KSLDH    FKQ D K L +K L +EI  +  K  +++  L  +    +      L 
Sbjct: 776 VFYKSLDHLGLTFKQADKKLLTSKQLVSEISTV--KVEQQNKRLHPLTPKPQE----QLN 829

Query: 734 FEYSDPDIHEDLYQL 748
           +++ D D+  D+++L
Sbjct: 830 YKFEDQDVLFDIFKL 844



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 89/234 (38%), Positives = 119/234 (50%), Gaps = 54/234 (23%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
           L   DAL+YL  VK  F ++ E Y++FL++MKDFK+Q IDT GVI RV  LFKGH +LI 
Sbjct: 78  LNVKDALSYLDQVKIQFYNQSEVYNNFLDIMKDFKSQSIDTPGVIDRVSTLFKGHPNLIQ 137

Query: 103 GFNTFLPKGYEITLPLEDEQPPP------------------------------------K 126
           GFNTFLP GY+I   L+   P P                                    +
Sbjct: 138 GFNTFLPPGYKIECSLDPSDPNPIRVTTPTGTTTGSNIAGTSYNQGWGNDEMSVVATVSQ 197

Query: 127 KPVEFEE----------------AINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSIT 170
           +  +F E                AI++VNKIKTRF     +YK FL+IL  Y++E K I 
Sbjct: 198 QQQQFNEAIGNQNAGSGQTEFNHAISYVNKIKTRFANQPDIYKQFLEILQTYQREQKPIA 257

Query: 171 EVYQEVEALFQDHPDLLEEFTHFLPDSSGA--ASIHYVPSGRNSILRDRSSAMP 222
           EVY++V  LF + PDLL++F  FLPD+S    A    +PS       +  + +P
Sbjct: 258 EVYEQVTQLFANCPDLLDDFKQFLPDTSNQTFAQTQRIPSAAEKFYLNNETQLP 311



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 43/69 (62%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDL 186
           +P+  ++A+++++++K +F     VY +FLDI+  ++ ++     V   V  LF+ HP+L
Sbjct: 76  RPLNVKDALSYLDQVKIQFYNQSEVYNNFLDIMKDFKSQSIDTPGVIDRVSTLFKGHPNL 135

Query: 187 LEEFTHFLP 195
           ++ F  FLP
Sbjct: 136 IQGFNTFLP 144



 Score = 46.2 bits (108), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 3/90 (3%)

Query: 342 KNAMKSMFSQELSFCEKVKDKL--RDDYQEFLRCLHLYTKEIITRSELQSLVGDLLG-RY 398
           K    S  S+E++F +K++  L  R  Y EFL+ L+L+T++II +  L   V   LG   
Sbjct: 507 KTVKTSSLSEEITFFDKIRKALGNRLTYSEFLKLLNLFTQDIIDKDTLVERVDGFLGDAN 566

Query: 399 PDLMDGFNGFLARCEKSEELLADVMSKKSL 428
            DL+D F  F+   +K + L      K +L
Sbjct: 567 TDLLDWFKLFVGYEDKPQNLENITFKKHAL 596



 Score = 45.8 bits (107), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 22/76 (28%), Positives = 41/76 (53%)

Query: 34  GGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKEL 93
           G    G+ +   N A++Y+  +K  F ++ + Y  FLE+++ ++ ++   A V  +V +L
Sbjct: 207 GNQNAGSGQTEFNHAISYVNKIKTRFANQPDIYKQFLEILQTYQREQKPIAEVYEQVTQL 266

Query: 94  FKGHRDLILGFNTFLP 109
           F    DL+  F  FLP
Sbjct: 267 FANCPDLLDDFKQFLP 282


>gi|45185684|ref|NP_983400.1| ACL004Wp [Ashbya gossypii ATCC 10895]
 gi|44981439|gb|AAS51224.1| ACL004Wp [Ashbya gossypii ATCC 10895]
 gi|374106606|gb|AEY95515.1| FACL004Wp [Ashbya gossypii FDAG1]
          Length = 1377

 Score =  160 bits (404), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 96/273 (35%), Positives = 150/273 (54%), Gaps = 15/273 (5%)

Query: 486 YSSKDKYLAKPIQE---LDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS- 541
           Y  + K++   I E   LDL  CE C PSY+ LPK       S R E+  EVLND WV  
Sbjct: 562 YQERPKHIENVIHEKHRLDLDLCEACGPSYKRLPKADTFMPCSGRDEMCWEVLNDEWVGH 621

Query: 542 VTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKT 601
               SED  F   RKNQYE++LF+ E++R E D  +E+   T + +E +  KI N T + 
Sbjct: 622 PVWASEDSGFIAHRKNQYEDTLFKIEEERHEYDFYIEANLRTIQTLETIANKIANMTPEE 681

Query: 602 DGPIRVEDHF--TALNL--RCIERLY-GDHGLDVMDVLRKNASLALPVILTRLKQKQEEW 656
               ++      T++ +  + I ++Y  D G +++D L ++ ++ +P++L RLKQK EEW
Sbjct: 682 KAAFKLPPGLGHTSVTIYKKVIRKVYDKDRGFEIIDALHEHPAITVPLVLKRLKQKDEEW 741

Query: 657 ARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDV 716
            R + ++NKVW E+  K ++KSLDH    FKQ D K L AK L +EI  I   +  +   
Sbjct: 742 RRAQREWNKVWRELEQKVFYKSLDHLGLTFKQADKKLLTAKQLISEISSIKVDQSNKRIH 801

Query: 717 LLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLI 749
            L   A ++      L +++ +P++ +D+  L+
Sbjct: 802 PLTPKAKSQ------LSYDFKEPEVFQDILSLV 828



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 48/116 (41%), Positives = 65/116 (56%), Gaps = 5/116 (4%)

Query: 37  GGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKG 96
           G   + L   DAL+YL+ VK  F  + + Y+ FL++MKDFK+Q IDT GVI RV  LF G
Sbjct: 126 GSAYRPLNVKDALSYLEQVKFQFSSRPDVYNHFLDIMKDFKSQAIDTPGVIERVSTLFHG 185

Query: 97  HRDLILGFNTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVY 152
           +  LI GFNTFLP GY I  P +     P  P++       + +I     G +H +
Sbjct: 186 YPALIQGFNTFLPHGYNIECPSD-----PNDPIKVTTPFGTIGEIPITGAGGNHAH 236



 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 44/77 (57%), Positives = 54/77 (70%), Gaps = 2/77 (2%)

Query: 125 PKKP--VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQD 182
           PKK   VEF  AI++VNKIKTRF     +YK FL+IL  Y++E K I EVY +V  LFQ+
Sbjct: 278 PKKAGDVEFSHAISYVNKIKTRFAEQPDIYKHFLEILQTYQREQKPINEVYAQVTVLFQN 337

Query: 183 HPDLLEEFTHFLPDSSG 199
            PDLL++F  FLPDSS 
Sbjct: 338 APDLLDDFKKFLPDSSA 354



 Score = 48.1 bits (113), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 20/69 (28%), Positives = 39/69 (56%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDL 186
           +P+  ++A++++ ++K +F     VY  FLDI+  ++ +      V + V  LF  +P L
Sbjct: 130 RPLNVKDALSYLEQVKFQFSSRPDVYNHFLDIMKDFKSQAIDTPGVIERVSTLFHGYPAL 189

Query: 187 LEEFTHFLP 195
           ++ F  FLP
Sbjct: 190 IQGFNTFLP 198



 Score = 43.9 bits (102), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 27/95 (28%), Positives = 48/95 (50%), Gaps = 5/95 (5%)

Query: 20  SSRGEPSG-----QTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMK 74
           S+ G P+       TQ   G G   A  +  + A++Y+  +K  F ++ + Y  FLE+++
Sbjct: 256 SAEGSPAAIATPATTQEQYGTGPKKAGDVEFSHAISYVNKIKTRFAEQPDIYKHFLEILQ 315

Query: 75  DFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLP 109
            ++ ++     V A+V  LF+   DL+  F  FLP
Sbjct: 316 TYQREQKPINEVYAQVTVLFQNAPDLLDDFKKFLP 350



 Score = 39.7 bits (91), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 5/76 (6%)

Query: 123 PPPKKPVEFE----EAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEA 178
           P P KP+E E    E   F +K K +F G+  +Y  FL ILN+Y ++     ++ ++V  
Sbjct: 486 PEPIKPLEDELNLVEEATFFDKAK-KFIGNKQIYTEFLKILNLYSQDLLEKEKLVEDVSH 544

Query: 179 LFQDHPDLLEEFTHFL 194
                P+L + F  F+
Sbjct: 545 YLSGSPELFDWFKSFV 560


>gi|300123373|emb|CBK24646.2| unnamed protein product [Blastocystis hominis]
          Length = 445

 Score =  159 bits (403), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 101/293 (34%), Positives = 156/293 (53%), Gaps = 17/293 (5%)

Query: 496 PIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMR 555
           P+    +  C+  TPSY  LP        SQR+   + VLND+ VS T+GSED S+ HMR
Sbjct: 7   PLSWEQIHACKGPTPSYHELPPQIPRRVGSQRSYADSLVLNDNLVSQTTGSEDLSYIHMR 66

Query: 556 KNQYEESLFRCEDDRFELDMLLESVNVTTKRVEEL---LEKINNNTIKTDGPIRVEDHFT 612
           +NQYEE+LFRCEDDRFE+D++LE+      ++  L   LE +     + D     +D  +
Sbjct: 67  RNQYEEALFRCEDDRFEVDVILETTRSAIAQLHLLSSELEAVQET--QKDAYRLRDDALS 124

Query: 613 ALNLRCIERLYGDHGLD--VMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEI 670
           A+ L  I R+Y  +G+D  V+ +L  N    +P IL RL+ K++EW   +   N+   EI
Sbjct: 125 AIQLAAIRRVYAHNGMDQEVVKLLFLNPRDCIPRILERLEAKEKEWMGEKVLMNERCREI 184

Query: 671 YSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVP 730
             +NY+ SLDHRSFYF+Q D K +  K L   IK+++ K   +       A G      P
Sbjct: 185 QKQNYYLSLDHRSFYFRQTDKKEITTKVLIDTIKDLAAKHAADH----PHAKGRFDQGDP 240

Query: 731 HLEFEYSDPDIHEDLYQLI------KYSCGEMCTTEQLDKVMKIWTTFLEPML 777
              F +++  +H+ + +L+      +++ GEM        V K +   L+ ++
Sbjct: 241 QFRFAFANRVVHKQVLRLLLVAGKRQFARGEMVGLGNARDVQKRFHALLQDLV 293


>gi|354544240|emb|CCE40963.1| hypothetical protein CPAR2_110010 [Candida parapsilosis]
          Length = 1427

 Score =  159 bits (403), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 90/213 (42%), Positives = 124/213 (58%), Gaps = 6/213 (2%)

Query: 500 LDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMRKNQ 558
           L+LS C+   PSYR LPK       S R E+  EVLND WV   T  SED  F   RKNQ
Sbjct: 649 LELSLCKAYGPSYRQLPKAETFMPCSGRDEMCWEVLNDEWVGHPTWASEDSGFIAHRKNQ 708

Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDG----PIRVEDHFTAL 614
           YEE LF+ E++R E D  +ES   T + +E +  +I N T +       P  +  + T +
Sbjct: 709 YEEILFKIEEERLEFDYYMESNLRTIQILETIANRIANMTPEQKANFKLPPGLGHNSTTI 768

Query: 615 NLRCIERLY-GDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSK 673
             + I ++Y  D G +V+D L +N ++A+P++L RLKQK EEW R + ++NKVW E+  K
Sbjct: 769 YKKVIRKIYDKDRGFEVIDALHENPAIAVPIVLKRLKQKDEEWKRAQREWNKVWREMEQK 828

Query: 674 NYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEI 706
            ++KSLDH    FKQ D K L AK L +EI  +
Sbjct: 829 VFYKSLDHLGLTFKQADKKLLTAKQLVSEISTV 861



 Score = 98.6 bits (244), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 46/83 (55%), Positives = 58/83 (69%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
           L   DAL+YL  VK  F ++ E Y++FL++MKDFK+Q IDT GVI RV  LFKGH +LI 
Sbjct: 201 LNVKDALSYLDQVKIQFYNQAEVYNNFLDIMKDFKSQSIDTPGVIDRVSTLFKGHPNLIQ 260

Query: 103 GFNTFLPKGYEITLPLEDEQPPP 125
           GFNTFLP GY+I   ++   P P
Sbjct: 261 GFNTFLPPGYKIECSMDPSDPNP 283



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 37/70 (52%), Positives = 49/70 (70%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           ++F  AI +VNKIKTRF     +YK FL+IL  Y++E K I EVY++V  LF   PDLL+
Sbjct: 351 IDFNHAITYVNKIKTRFANQPDIYKHFLEILQTYQREQKPIAEVYEQVTELFSGCPDLLD 410

Query: 189 EFTHFLPDSS 198
           +F  FLPD+S
Sbjct: 411 DFKQFLPDTS 420



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 43/69 (62%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDL 186
           +P+  ++A+++++++K +F     VY +FLDI+  ++ ++     V   V  LF+ HP+L
Sbjct: 199 RPLNVKDALSYLDQVKIQFYNQAEVYNNFLDIMKDFKSQSIDTPGVIDRVSTLFKGHPNL 258

Query: 187 LEEFTHFLP 195
           ++ F  FLP
Sbjct: 259 IQGFNTFLP 267



 Score = 49.3 bits (116), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 41/71 (57%)

Query: 39  GAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHR 98
           G+ ++  N A+ Y+  +K  F ++ + Y  FLE+++ ++ ++   A V  +V ELF G  
Sbjct: 347 GSGQIDFNHAITYVNKIKTRFANQPDIYKHFLEILQTYQREQKPIAEVYEQVTELFSGCP 406

Query: 99  DLILGFNTFLP 109
           DL+  F  FLP
Sbjct: 407 DLLDDFKQFLP 417



 Score = 43.5 bits (101), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 3/88 (3%)

Query: 344 AMKSMFSQELSFCEKVKDKL--RDDYQEFLRCLHLYTKEIITRSELQSLVGDLLG-RYPD 400
           A  S  S+E+ F +K+K  L  +  Y EFL+ L+L+T++II +  L   V   LG    D
Sbjct: 562 AKSSSLSEEIGFFDKIKRALGNKQTYGEFLKLLNLFTQDIIDKDTLVERVDAFLGDSNAD 621

Query: 401 LMDGFNGFLARCEKSEELLADVMSKKSL 428
           L + F  F+   +K + L      K +L
Sbjct: 622 LFEWFKLFVGYEDKPQNLENIAFKKHAL 649


>gi|406606707|emb|CCH41931.1| Transcriptional regulatory protein [Wickerhamomyces ciferrii]
          Length = 1458

 Score =  159 bits (402), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 101/292 (34%), Positives = 153/292 (52%), Gaps = 14/292 (4%)

Query: 498 QELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMRK 556
            +LDL  C+   PSYR LPK       S R E+  EVLND WV   T  SED  F   RK
Sbjct: 590 HQLDLMLCKPYGPSYRKLPKAETYMPCSGRDEMCWEVLNDEWVGHPTWASEDSGFIAHRK 649

Query: 557 NQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----T 612
           NQYEE LFR E++R E D  +E+   T + +E +  +I+N T +     ++ +       
Sbjct: 650 NQYEEILFRIEEERHEYDYYMEANLRTIQTLETIANRISNMTPEEKASFKLPNGLGHTSQ 709

Query: 613 ALNLRCIERLYG-DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIY 671
            +  + I ++Y  D G +V+D L +N S+A+PV+L RLKQK EEW R   ++NKVW E+ 
Sbjct: 710 TIYKKVIRKVYNKDRGFEVIDALHENPSIAIPVVLKRLKQKDEEWRRTHREWNKVWREME 769

Query: 672 SKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPH 731
            K Y KSLDH    FKQ D K L  K L +EI  I  K  + +  L  +    ++     
Sbjct: 770 QKVYFKSLDHLGLTFKQADKKLLTTKQLVSEISTI--KSEQTNKRLHPLTPKPQK----Q 823

Query: 732 LEFEYSDPDIHEDLYQLIK--YSCGEMCTTEQLDKVMKIWTTFLEPMLGVPS 781
           L++++ D ++  D+ +L+    + G   +    +K+   + +F+     + S
Sbjct: 824 LDYDFFDNEVLFDITKLVYVFLNAGSSYSANDKEKLYDFFKSFISLFFSIDS 875



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 51/100 (51%), Positives = 62/100 (62%), Gaps = 1/100 (1%)

Query: 27  GQTQVVGGGGGGGAQK-LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAG 85
           G  Q  G G    A + L   DAL+YL  VK  FQ++ + Y+ FL++MKDFK+Q IDT G
Sbjct: 113 GVKQPSGPGTPMSAYRPLNVKDALSYLDQVKVQFQNRPDVYNHFLDIMKDFKSQSIDTPG 172

Query: 86  VIARVKELFKGHRDLILGFNTFLPKGYEITLPLEDEQPPP 125
           VI RV  LF+GH  LI GFNTFLP GY I   L+   P P
Sbjct: 173 VIDRVSTLFRGHPSLIQGFNTFLPPGYRIECSLDPSDPNP 212



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 42/75 (56%), Positives = 55/75 (73%)

Query: 128 PVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLL 187
           PVEF  AI++VNKIKTRF     +YK FL+IL  Y++E K I EVY +V  LFQ+ PDLL
Sbjct: 334 PVEFNHAISYVNKIKTRFANQPDIYKHFLEILQTYQREQKPIAEVYGQVTVLFQNAPDLL 393

Query: 188 EEFTHFLPDSSGAAS 202
           ++F  FLPD++G A+
Sbjct: 394 DDFKQFLPDTNGNAA 408



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 42/69 (60%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDL 186
           +P+  ++A+++++++K +FQ    VY  FLDI+  ++ ++     V   V  LF+ HP L
Sbjct: 128 RPLNVKDALSYLDQVKVQFQNRPDVYNHFLDIMKDFKSQSIDTPGVIDRVSTLFRGHPSL 187

Query: 187 LEEFTHFLP 195
           ++ F  FLP
Sbjct: 188 IQGFNTFLP 196



 Score = 45.8 bits (107), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 7/83 (8%)

Query: 32  VGGGGG-----GGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGV 86
           +GG  G     GG  +   N A++Y+  +K  F ++ + Y  FLE+++ ++ ++   A V
Sbjct: 321 IGGQAGVDRKSGGPVEF--NHAISYVNKIKTRFANQPDIYKHFLEILQTYQREQKPIAEV 378

Query: 87  IARVKELFKGHRDLILGFNTFLP 109
             +V  LF+   DL+  F  FLP
Sbjct: 379 YGQVTVLFQNAPDLLDDFKQFLP 401



 Score = 45.1 bits (105), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 2/70 (2%)

Query: 347 SMFSQELSFCEKVKDKL--RDDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDG 404
           S   +E+ F +KVK  +  +  Y +FL+ +++Y +E+I +  L   V   +G + DL D 
Sbjct: 509 SNLIEEIGFFDKVKKAIGSKQSYNDFLKIVNIYNQELIDKDTLIERVEGFIGSHIDLFDW 568

Query: 405 FNGFLARCEK 414
           F GF+   +K
Sbjct: 569 FKGFVGYDDK 578



 Score = 39.7 bits (91), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 1/71 (1%)

Query: 124 PPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDH 183
           PP K     E I F +K+K    G    Y  FL I+N+Y +E      + + VE     H
Sbjct: 504 PPHKTSNLIEEIGFFDKVKKAI-GSKQSYNDFLKIVNIYNQELIDKDTLIERVEGFIGSH 562

Query: 184 PDLLEEFTHFL 194
            DL + F  F+
Sbjct: 563 IDLFDWFKGFV 573


>gi|190349059|gb|EDK41639.2| hypothetical protein PGUG_05737 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 829

 Score =  159 bits (402), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 105/321 (32%), Positives = 165/321 (51%), Gaps = 13/321 (4%)

Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMRKN 557
           +L+LS C+   PSYR LPK+      S R E+  EVLND WV   T  SED  F   RKN
Sbjct: 21  QLELSLCKAFGPSYRQLPKSETFMPCSGRDEMCWEVLNDEWVGHPTWASEDSGFIAHRKN 80

Query: 558 QYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TA 613
           QYEE LF+ E++R E D  +E+   T + +E +  +I N T +     ++ +      + 
Sbjct: 81  QYEEILFKIEEERLEFDYHMEANLRTIQTLETIANRIANMTPEQKASFKLPEDLGHTSST 140

Query: 614 LNLRCIERLY-GDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYS 672
           +  + I ++Y  D G +V+D L +N ++A+PV+L RLKQK EEW R   ++NKVW E+  
Sbjct: 141 IYKKVIRKIYDKDRGFEVIDALHENPAIAVPVVLKRLKQKDEEWKRSHREWNKVWREMEQ 200

Query: 673 KNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHL 732
           K ++KSLDH    FKQ D K L AK L +EI  +  K  +++  L  +    +      L
Sbjct: 201 KVFYKSLDHLGLTFKQADKKLLTAKQLVSEISTV--KVEQQNKRLHPLTPKPQE----QL 254

Query: 733 EFEYSDPDIHEDLYQLIK-YSCGEMCTTEQLDKVMKIWTTFLEPMLGVPSRPQGAEDTED 791
           ++++ +P +  D+ +L+  +      +    +K+   + +FL     +P     A  +E 
Sbjct: 255 QYKFDEPIVLLDILKLVTVFIKSSNYSVNDREKLSYFFQSFLTLFFKLPKETIAAAASEK 314

Query: 792 VVKAKSHTVKSRAASVGDSDG 812
                    +S   S GD  G
Sbjct: 315 SDGKAEEDSESLTESQGDQLG 335


>gi|170593427|ref|XP_001901466.1| Paired amphipathic helix repeat family protein [Brugia malayi]
 gi|158591533|gb|EDP30146.1| Paired amphipathic helix repeat family protein [Brugia malayi]
          Length = 1252

 Score =  159 bits (401), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 128/457 (28%), Positives = 221/457 (48%), Gaps = 80/457 (17%)

Query: 348 MFSQELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGF 405
           +F  ++ + ++V+  L D+  ++ FLRCL LY + II++ EL  L+   +GR+  L+   
Sbjct: 405 LFFDKVCWLQEVRKALIDNGVHENFLRCLALYNQSIISKIELVELLTPFIGRFTVLL--- 461

Query: 406 NGFLARCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREK 465
                  +  +ELL              +P        D   D +++D  K R R+A+  
Sbjct: 462 -------KHVKELLG-------------LP--------DIHNDSQQNDD-KHRRRQAQMN 492

Query: 466 DRLDKSVAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSAS 525
           D ++                             ++D + C R   SYR LP++Y  P  S
Sbjct: 493 DDMELE--------------------------HKIDYATCRRLGVSYRSLPESYEKPLCS 526

Query: 526 QRTELGAEVLNDHWVSVTS-GSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTT 584
            RT L   VLND WVS     SED S  H +K Q+EE +FR ED+R+ELD+++E VN T 
Sbjct: 527 GRTSLCESVLNDSWVSFPCWSSEDSSAVHSKKTQFEEFVFRTEDERYELDIVIE-VNKTA 585

Query: 585 KRVEELLEK----INNNTIKTD--GPIRVEDHFTALNLRCIERLYGDHGLDVMDVLRKNA 638
             V E++++    + N  +K    GP  +     ++ LR ++R+YGDH + +++   K+ 
Sbjct: 586 LEVLEMVQRKMLRMKNEELKCFRLGP-SLGGSSNSIMLRALQRIYGDHTVKMLEGAMKSP 644

Query: 639 SLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKA 698
            + +P ++ R++QK  EW + +   N++W E   K+Y KSLDH++  FKQ D K L AK 
Sbjct: 645 QVMIPRLIERMRQKDVEWRKNQELCNRIWREETEKHYTKSLDHQAVIFKQNDLKLLRAKT 704

Query: 699 LSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEFEY-SDPDIHEDLYQLIKYSCGEMC 757
           + ++ + + +++   +D   ++  G      PH  + Y  D  +  D+  LI +      
Sbjct: 705 IVSQFENLYDERADRNDEGESVEYG------PHCVYSYPEDIRVLYDVNDLIIHYVKRQA 758

Query: 758 TTEQLDK--VMKIWTTFLEPMLGVPSRPQGAEDTEDV 792
             ++ +K    +    F+  +  +P  PQ   D E+V
Sbjct: 759 NIQKEEKRHAKRYLKRFVPELFNIP--PQELSDEEEV 793



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 40/75 (53%), Positives = 53/75 (70%)

Query: 42  KLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLI 101
           +L   DAL YL  VK  F D  + Y +FL+VMKDFK+Q IDT GVI RV  LF+G  +LI
Sbjct: 58  RLRVEDALCYLDQVKQQFADAPDVYVNFLDVMKDFKSQAIDTPGVIKRVSRLFRGRPNLI 117

Query: 102 LGFNTFLPKGYEITL 116
           + FNTFLP G+++++
Sbjct: 118 IAFNTFLPPGFDVSV 132



 Score = 46.2 bits (108), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 47/93 (50%), Gaps = 5/93 (5%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           +  E+A+ +++++K +F     VY +FLD++  ++ +      V + V  LF+  P+L+ 
Sbjct: 59  LRVEDALCYLDQVKQQFADAPDVYVNFLDVMKDFKSQAIDTPGVIKRVSRLFRGRPNLII 118

Query: 189 EFTHFLP-----DSSGAASIHYVPSGRNSILRD 216
            F  FLP        G   I   P+GR  I+ +
Sbjct: 119 AFNTFLPPGFDVSVDGIKVIITEPNGRRQIINE 151



 Score = 42.4 bits (98), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 13/96 (13%)

Query: 131 FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRK--ENKSITEVY----QEVEALFQDHP 184
           +++AI + NK+  RF+    +Y  FL+IL    +  +   + + Y    + VE LF++  
Sbjct: 240 YQDAIMYRNKVMARFEDRPEIYHKFLEILQRLHRLTQEGGVIQGYKRALEAVEMLFENDT 299

Query: 185 DLLEEF-THFLPDSSGAASIHYVPSGRNSILRDRSS 219
           DL++EF   F P  SG +         +S LRD +S
Sbjct: 300 DLVQEFKQQFQPSCSGNSCTS------SSTLRDTAS 329


>gi|146412005|ref|XP_001481974.1| hypothetical protein PGUG_05737 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 829

 Score =  159 bits (401), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 105/321 (32%), Positives = 165/321 (51%), Gaps = 13/321 (4%)

Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMRKN 557
           +L+LS C+   PSYR LPK+      S R E+  EVLND WV   T  SED  F   RKN
Sbjct: 21  QLELSLCKAFGPSYRQLPKSETFMPCSGRDEMCWEVLNDEWVGHPTWASEDSGFIAHRKN 80

Query: 558 QYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TA 613
           QYEE LF+ E++R E D  +E+   T + +E +  +I N T +     ++ +      + 
Sbjct: 81  QYEEILFKIEEERLEFDYHMEANLRTIQTLETIANRIANMTPEQKASFKLPEDLGHTSST 140

Query: 614 LNLRCIERLY-GDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYS 672
           +  + I ++Y  D G +V+D L +N ++A+PV+L RLKQK EEW R   ++NKVW E+  
Sbjct: 141 IYKKVIRKIYDKDRGFEVIDALHENPAIAVPVVLKRLKQKDEEWKRSHREWNKVWREMEQ 200

Query: 673 KNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHL 732
           K ++KSLDH    FKQ D K L AK L +EI  +  K  +++  L  +    +      L
Sbjct: 201 KVFYKSLDHLGLTFKQADKKLLTAKQLVSEISTV--KVEQQNKRLHPLTPKPQE----QL 254

Query: 733 EFEYSDPDIHEDLYQLIK-YSCGEMCTTEQLDKVMKIWTTFLEPMLGVPSRPQGAEDTED 791
           ++++ +P +  D+ +L+  +      +    +K+   + +FL     +P     A  +E 
Sbjct: 255 QYKFDEPIVLLDILKLVTVFIKSSNYSVNDREKLSYFFQSFLTLFFKLPKETIAAAASEK 314

Query: 792 VVKAKSHTVKSRAASVGDSDG 812
                    +S   S GD  G
Sbjct: 315 SDGKAEEDSESLTESQGDQLG 335


>gi|68473740|ref|XP_718973.1| potential Sin3.Rpd3 histone deacetylase complex component Sin3p
           [Candida albicans SC5314]
 gi|68473949|ref|XP_718871.1| potential Sin3.Rpd3 histone deacetylase complex component Sin3p
           [Candida albicans SC5314]
 gi|46440664|gb|EAK99967.1| potential Sin3.Rpd3 histone deacetylase complex component Sin3p
           [Candida albicans SC5314]
 gi|46440770|gb|EAL00072.1| potential Sin3.Rpd3 histone deacetylase complex component Sin3p
           [Candida albicans SC5314]
          Length = 1119

 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 105/325 (32%), Positives = 164/325 (50%), Gaps = 17/325 (5%)

Query: 500 LDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMRKNQ 558
           L+LS C+   PSYR LPK       S R E+  EVLND WV   T  SED  F   RKNQ
Sbjct: 303 LELSLCKAYGPSYRQLPKAETYMPCSGRDEMCWEVLNDEWVGHPTWASEDSGFIAHRKNQ 362

Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TAL 614
           YEE LF+ E++R E D  +ES   T + +E +  +I N T +     ++        + +
Sbjct: 363 YEEILFKIEEERLEFDYYMESNLRTIQILETIANRIANMTPEQKATFKLPPGLGHNSSTI 422

Query: 615 NLRCIERLY-GDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSK 673
             + I ++Y  D G +V+D L +N S+A+P++L RLKQK EEW R + ++NKVW E+  K
Sbjct: 423 YKKIIRKIYDKDRGFEVIDALHENPSIAVPIVLKRLKQKDEEWKRAQREWNKVWREMEQK 482

Query: 674 NYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLE 733
            ++KSLDH    FKQ D K L  K L +EI  +  K  +++  L  +    +      L 
Sbjct: 483 VFYKSLDHVGLTFKQADKKLLTVKQLVSEISTV--KVEQQNKRLHPLTPKPQE----QLN 536

Query: 734 FEYSDPDIHEDLYQLIKYSCGEMCTTEQLD--KVMKIWTTFLEPMLGVPSRPQGAEDTED 791
           +++ D ++  D+ +L +    +  T    D  K+++    F+     +P+      +T  
Sbjct: 537 YDFKDNEVLFDILKLAEVFINKSSTYSVHDREKLLQFLQFFMSLFFSIPTE---TIETAL 593

Query: 792 VVKAKSHTVKSRAASVGDSDGSPDG 816
           V + +           GD + S +G
Sbjct: 594 VARGRIEKSSEEENEKGDVEMSENG 618



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 38/70 (54%), Positives = 50/70 (71%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           V F  AI++VNKIKTRF     +YK FL+IL  Y++E K I EVY++V  LF + PDLL+
Sbjct: 11  VGFNHAISYVNKIKTRFASQPDIYKQFLEILQTYQREQKQIAEVYEQVTVLFANSPDLLD 70

Query: 189 EFTHFLPDSS 198
           +F  FLPD+S
Sbjct: 71  DFKQFLPDTS 80



 Score = 43.9 bits (102), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 21/72 (29%), Positives = 39/72 (54%)

Query: 38  GGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGH 97
           G + ++  N A++Y+  +K  F  + + Y  FLE+++ ++ ++   A V  +V  LF   
Sbjct: 6   GASGQVGFNHAISYVNKIKTRFASQPDIYKQFLEILQTYQREQKQIAEVYEQVTVLFANS 65

Query: 98  RDLILGFNTFLP 109
            DL+  F  FLP
Sbjct: 66  PDLLDDFKQFLP 77


>gi|238879407|gb|EEQ43045.1| conserved hypothetical protein [Candida albicans WO-1]
          Length = 999

 Score =  158 bits (399), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 105/325 (32%), Positives = 164/325 (50%), Gaps = 17/325 (5%)

Query: 500 LDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMRKNQ 558
           L+LS C+   PSYR LPK       S R E+  EVLND WV   T  SED  F   RKNQ
Sbjct: 330 LELSLCKAYGPSYRQLPKAETYMPCSGRDEMCWEVLNDEWVGHPTWASEDSGFIAHRKNQ 389

Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TAL 614
           YEE LF+ E++R E D  +ES   T + +E +  +I N T +     ++        + +
Sbjct: 390 YEEILFKIEEERLEFDYYMESNLRTIQILETIANRIANMTPEQKATFKLPPGLGHNSSTI 449

Query: 615 NLRCIERLY-GDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSK 673
             + I ++Y  D G +V+D L +N S+A+P++L RLKQK EEW R + ++NKVW E+  K
Sbjct: 450 YKKIIRKIYDKDRGFEVIDALHENPSIAVPIVLKRLKQKDEEWKRAQREWNKVWREMEQK 509

Query: 674 NYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLE 733
            ++KSLDH    FKQ D K L  K L +EI  +  K  +++  L  +    +      L 
Sbjct: 510 VFYKSLDHVGLTFKQADKKLLTVKQLVSEISTV--KVEQQNKRLHPLTPKPQE----QLN 563

Query: 734 FEYSDPDIHEDLYQLIKYSCGEMCTTEQLD--KVMKIWTTFLEPMLGVPSRPQGAEDTED 791
           +++ D ++  D+ +L +    +  T    D  K+++    F+     +P+      +T  
Sbjct: 564 YDFKDNEVLIDILKLAEVFINKSSTYSAHDREKLLQFLQFFMSLFFSIPTE---TIETAL 620

Query: 792 VVKAKSHTVKSRAASVGDSDGSPDG 816
           V + +           GD + S +G
Sbjct: 621 VARGRIEKSSEEENEKGDVEMSENG 645



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 38/70 (54%), Positives = 50/70 (71%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           V F  AI++VNKIKTRF     +YK FL+IL  Y++E K I EVY++V  LF + PDLL+
Sbjct: 38  VGFNHAISYVNKIKTRFASQPDIYKQFLEILQTYQREQKQIAEVYEQVTVLFANSPDLLD 97

Query: 189 EFTHFLPDSS 198
           +F  FLPD+S
Sbjct: 98  DFKQFLPDTS 107



 Score = 43.5 bits (101), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 21/72 (29%), Positives = 39/72 (54%)

Query: 38  GGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGH 97
           G + ++  N A++Y+  +K  F  + + Y  FLE+++ ++ ++   A V  +V  LF   
Sbjct: 33  GASGQVGFNHAISYVNKIKTRFASQPDIYKQFLEILQTYQREQKQIAEVYEQVTVLFANS 92

Query: 98  RDLILGFNTFLP 109
            DL+  F  FLP
Sbjct: 93  PDLLDDFKQFLP 104


>gi|326500460|dbj|BAK06319.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 645

 Score =  158 bits (399), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 142/476 (29%), Positives = 217/476 (45%), Gaps = 91/476 (19%)

Query: 349 FSQELSFCEKVKDKLRDDYQEFLRCLHLYTKE-IITRSELQSLVGDLLGRYPDLMDGF-N 406
           F   +  C  + D   DDY  FL+ +  + K+  +T  E+ S V   +   P+L++ F +
Sbjct: 124 FLSRVKTCPYISD---DDYAAFLQTMQDFCKDRTMTPREVYSNVERCMRNCPELLEEFVD 180

Query: 407 GFLARCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGV--KDRDREARE 464
            +L      E+L A V                      +  D    DGV  K+ D E + 
Sbjct: 181 NYLP-----EDLKASV----------------------KANDNHSLDGVHMKEGDEEGK- 212

Query: 465 KDRLDKSVAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSA 524
                         V P     +S+   L   ++  +L     CTPSY LLP N  IP  
Sbjct: 213 --------------VKPLREWTTSRIDELPPKVEPKELK--RHCTPSYYLLPDN-CIPLL 255

Query: 525 SQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTT 584
           S RT+LG  +LND  +   S  E+ S  H   N+YE ++  CE+D FE DMLL+   VT 
Sbjct: 256 SYRTKLGRSILNDALICPVS--EEESPNHKTANEYEATMSLCEEDMFESDMLLQWFRVTA 313

Query: 585 KRVEELLEKINNNTIKTDGPIRVEDHFTALNLRCIERLYGDHGLDVMDVLRKNASLALPV 644
             +  L  ++ +N       +++ +  T L+ RCI RLYG+  L+ + +   NAS  LP+
Sbjct: 314 DFIANLQHRVGSN-------VKIREQLTPLHRRCIIRLYGEEFLEAL-LDTNNASTILPI 365

Query: 645 ILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIK 704
           IL+RL +   E    R   +K  +E+ +KNY+KSLD R   FKQ D+K +  KAL AE K
Sbjct: 366 ILSRLNRSIVELRDARLHLHKTCSEVIAKNYYKSLDRRGPSFKQLDAKRMSQKALLAEAK 425

Query: 705 EISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLIKYSCGEMCTTEQLDK 764
           +I++ K K +D                   +Y++PDIH+D+  +I  +C         +K
Sbjct: 426 KINKMKPKAED-------------------QYANPDIHKDISSIISSACASE------EK 460

Query: 765 VMKIWTTFLEPMLGVPSRPQGAEDTEDVVKAKSHTVKSRAASVGDSDGSPDGDAAA 820
            M  WT  + P L        +E+T    KA  H   +R  ++   + +PD  AA 
Sbjct: 461 QMVTWTKIVHPFLSAHCARPPSEETAAPEKACEH-CGTRKHTL---NSNPDAFAAT 512


>gi|448089574|ref|XP_004196844.1| Piso0_004070 [Millerozyma farinosa CBS 7064]
 gi|448093873|ref|XP_004197875.1| Piso0_004070 [Millerozyma farinosa CBS 7064]
 gi|359378266|emb|CCE84525.1| Piso0_004070 [Millerozyma farinosa CBS 7064]
 gi|359379297|emb|CCE83494.1| Piso0_004070 [Millerozyma farinosa CBS 7064]
          Length = 1399

 Score =  158 bits (399), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 94/256 (36%), Positives = 143/256 (55%), Gaps = 12/256 (4%)

Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMRKN 557
           +L+LS C+   PSYR LPK       S R E+  EVLND WV   T  SED  F   RKN
Sbjct: 577 QLELSLCKAYGPSYRQLPKAETYAPCSGRDEMCWEVLNDEWVGHPTWASEDSGFIAHRKN 636

Query: 558 QYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TA 613
           QYEE LF+ E++R E D ++ES   T + +E +  +I N T +     ++        T+
Sbjct: 637 QYEEILFKIEEERHEFDYIMESNLRTIQTLETIANRIANMTPEQKANFKLPPGLGGTSTS 696

Query: 614 LNLRCIERLY-GDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYS 672
           +  + I ++Y  D G +V+D L +N ++A+P++L RLKQK EEW R   ++NKVW E+  
Sbjct: 697 IYKKVIRKVYDKDRGFEVIDALHENPAIAVPIVLKRLKQKDEEWKRSHREWNKVWREMEQ 756

Query: 673 KNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHL 732
           K ++KSLDH    FKQ D K L  K L +EI  +  K  +++  +  +    +      L
Sbjct: 757 KVFYKSLDHLGLTFKQADKKLLTTKQLVSEISTV--KVEQQNKRMHPLTPKPQE----QL 810

Query: 733 EFEYSDPDIHEDLYQL 748
            +++ D +I  D+++L
Sbjct: 811 NYQFKDYEILFDIFRL 826



 Score = 98.6 bits (244), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 47/85 (55%), Positives = 58/85 (68%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
           L   DAL+YL  VK  F ++ + Y++FL++MKDFK+Q IDT GVI RV  LFKGH +LI 
Sbjct: 133 LNVKDALSYLDQVKIQFYNQADVYNNFLDIMKDFKSQTIDTPGVIDRVSNLFKGHPNLIQ 192

Query: 103 GFNTFLPKGYEITLPLEDEQPPPKK 127
           GFNTFLP GY I   L+   P P K
Sbjct: 193 GFNTFLPPGYRIECSLDPSDPNPIK 217



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 38/77 (49%), Positives = 53/77 (68%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           +EF  AI++VNKIKTRF     VYK FL+IL  Y++E K I+EVY++V  LF + PDLL+
Sbjct: 282 IEFNHAISYVNKIKTRFANQPDVYKQFLEILQTYQREQKPISEVYEQVTVLFANSPDLLD 341

Query: 189 EFTHFLPDSSGAASIHY 205
           +F  FLPD+     + +
Sbjct: 342 DFKQFLPDTGNQGYLQH 358



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 42/69 (60%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDL 186
           +P+  ++A+++++++K +F     VY +FLDI+  ++ +      V   V  LF+ HP+L
Sbjct: 131 RPLNVKDALSYLDQVKIQFYNQADVYNNFLDIMKDFKSQTIDTPGVIDRVSNLFKGHPNL 190

Query: 187 LEEFTHFLP 195
           ++ F  FLP
Sbjct: 191 IQGFNTFLP 199



 Score = 42.7 bits (99), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 2/73 (2%)

Query: 37  GGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKG 96
            GG  ++  N A++Y+  +K  F ++ + Y  FLE+++ ++ ++   + V  +V  LF  
Sbjct: 278 AGG--QIEFNHAISYVNKIKTRFANQPDVYKQFLEILQTYQREQKPISEVYEQVTVLFAN 335

Query: 97  HRDLILGFNTFLP 109
             DL+  F  FLP
Sbjct: 336 SPDLLDDFKQFLP 348


>gi|380805811|gb|AFE74781.1| paired amphipathic helix protein Sin3b, partial [Macaca mulatta]
          Length = 678

 Score =  158 bits (399), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 90/225 (40%), Positives = 131/225 (58%), Gaps = 9/225 (4%)

Query: 531 GAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEEL 590
            A VLND WVS  S SED +F   +K  YEE L RCED+RFELD++LE+   T + +E +
Sbjct: 30  SAGVLNDTWVSFPSWSEDSTFVSSKKTPYEEQLHRCEDERFELDVVLETNLATIRVLESV 89

Query: 591 LEKINNNTIKTDGPIRVEDHF----TALNLRCIERLYGDHGLDVMDVLRKNASLALPVIL 646
            +K++    +     R++D        +  R I R+YGD   ++++ L+KN   A+PV+L
Sbjct: 90  QKKLSRMAPEDQEKFRLDDSLGGTSEVIQRRAIYRIYGDKAPEIIESLKKNPVTAVPVVL 149

Query: 647 TRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEI 706
            RLK K+EEW   +  FNK+W E Y K Y KSLDH++  FKQ D+K+L +K+L  EI+ +
Sbjct: 150 KRLKAKEEEWREAQQGFNKIWREQYEKAYLKSLDHQAVNFKQNDTKALRSKSLLNEIESV 209

Query: 707 SEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLIKY 751
            ++ +++          +  S  PHL F Y D  I ED   LI Y
Sbjct: 210 YDEHQEQHS-----EGRSAPSSEPHLIFVYEDRQILEDAAALISY 249


>gi|300123164|emb|CBK24437.2| unnamed protein product [Blastocystis hominis]
          Length = 451

 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 100/297 (33%), Positives = 158/297 (53%), Gaps = 19/297 (6%)

Query: 496 PIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMR 555
           P+    +  C+  TPSY  LP        SQR+   + VLND+ VS T+GSED S+ HMR
Sbjct: 7   PLSWEQIHACKGPTPSYHELPPQIPRRVGSQRSYADSLVLNDNLVSQTTGSEDLSYIHMR 66

Query: 556 KNQYEESLFRCEDDRFELDMLLES-------VNVTTKRVEELLEKINNNTIKTDGPIRVE 608
           +NQYEE+LFRCEDDRFE+D++LE+       +++ +  +E + E       + D     +
Sbjct: 67  RNQYEEALFRCEDDRFEVDVILETTRSAIAQLHLLSSELEAVQETQETQETQKDAYRLRD 126

Query: 609 DHFTALNLRCIERLYGDHGLD--VMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKV 666
           D  +A+ L  I R+Y  +G+D  V+ +L  N    +P IL RL+ K++EW   +   N+ 
Sbjct: 127 DALSAIQLAAIRRVYAHNGMDQEVVKLLFLNPRDCIPRILERLEAKEKEWMGEKVLMNER 186

Query: 667 WAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRR 726
             EI  +NY+ SLDHRSFYF+Q D K +  K L   IK+++ K   +       A G   
Sbjct: 187 CREIQKQNYYLSLDHRSFYFRQTDKKEITTKVLIDTIKDLAAKHAADH----PHAKGRFD 242

Query: 727 SIVPHLEFEYSDPDIHEDLYQLI------KYSCGEMCTTEQLDKVMKIWTTFLEPML 777
              P   F +++  +H+ + +L+      +++ GEM        V K +   L+ ++
Sbjct: 243 QGDPQFRFAFANRVVHKQVLRLLLVAGKRQFARGEMVGLGNARDVQKRFHALLQDLV 299


>gi|430813135|emb|CCJ29479.1| unnamed protein product, partial [Pneumocystis jirovecii]
          Length = 1304

 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 101/304 (33%), Positives = 175/304 (57%), Gaps = 21/304 (6%)

Query: 486 YSSKD---KYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS- 541
           Y+ KD   + +  P  ++DL  C+   PSYRLLPK+  +   S R E+  EVLND WVS 
Sbjct: 507 YNGKDDVIENIPAPRPKVDLMLCKAYGPSYRLLPKSETLLPCSGRDEMCWEVLNDGWVSH 566

Query: 542 VTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKT 601
            T  SED  F   +KNQYEE+L + E++R++ D+ +E    T + +E + ++I+N + + 
Sbjct: 567 PTWASEDSRFVAHKKNQYEETLHKVEEERYDYDLNIEVNLRTIQLLEPIAQQISNMSNEE 626

Query: 602 DGPIRVEDHF----TALNLRCIERLY-GDHGLDVMDVLRKNASLALPVILTRLKQKQEEW 656
               R+        T++  + ++++Y  + GL+V+D L +N ++A+P+IL RLKQK EEW
Sbjct: 627 KNSFRLPPGLGGQSTSIYQKVLKKVYDKEQGLEVIDALHENPAVAVPIILKRLKQKDEEW 686

Query: 657 ARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDV 716
            R + ++NK+W E   KN++KSLDH+   FK  D K++ ++ L  EI  + +++R+    
Sbjct: 687 KRAQREWNKIWRETEYKNFYKSLDHQGITFKSNDKKAITSRILLTEIDTLRKQQRE---- 742

Query: 717 LLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQL----IKYSCG-EMCTTEQLDKVMK-IWT 770
             A    ++       ++E+ D DI  D+  L    ++++ G  +   E+L+K +K  ++
Sbjct: 743 --ACINHSKSKSKSQFKYEFQDQDILIDILCLLSKQLEHAPGVSINDKEKLEKFLKYFFS 800

Query: 771 TFLE 774
            F E
Sbjct: 801 LFFE 804



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 89/248 (35%), Positives = 121/248 (48%), Gaps = 52/248 (20%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
           L   DAL+YL  VK  F ++ + Y+ FL++MKDFK+Q IDT GVI RV  LF+GH +L+ 
Sbjct: 148 LNVKDALSYLDQVKIQFSEQPDVYNRFLDIMKDFKSQSIDTLGVIERVSTLFRGHPNLVQ 207

Query: 103 GFNTFL--------------PKGYEITLPLED---------------------------- 120
           GFNTFL              P    +  PL                              
Sbjct: 208 GFNTFLPPGYRVECSLDPSDPTAIRVITPLGTMMTHSGLGSSLSTTQEGMRESWSTIQDS 267

Query: 121 ---EQP-------PPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSIT 170
               QP         K PVEF  AIN+VNKIK RF  +   YK FL+IL  Y+KE +SI 
Sbjct: 268 NIYNQPDNGISMTGKKAPVEFNHAINYVNKIKNRFSNEPDTYKRFLEILQTYQKEQRSIQ 327

Query: 171 EVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQVHVD 230
           +VY EV  LF+  PDLL++F  FLP+++ + S  +    R   + + +     +     D
Sbjct: 328 DVYAEVTILFKTAPDLLDDFKQFLPENNASNSSLFAVGPRLPPVGNFAPPTVVSNVTSKD 387

Query: 231 KKERAMAS 238
           KK+R  +S
Sbjct: 388 KKKRIQSS 395



 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 45/74 (60%)

Query: 122 QPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQ 181
           Q P  +P+  ++A+++++++K +F     VY  FLDI+  ++ ++     V + V  LF+
Sbjct: 141 QNPVYRPLNVKDALSYLDQVKIQFSEQPDVYNRFLDIMKDFKSQSIDTLGVIERVSTLFR 200

Query: 182 DHPDLLEEFTHFLP 195
            HP+L++ F  FLP
Sbjct: 201 GHPNLVQGFNTFLP 214



 Score = 43.9 bits (102), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 22/63 (34%), Positives = 40/63 (63%), Gaps = 2/63 (3%)

Query: 350 SQELSFCEKVKDKL--RDDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNG 407
           ++ELSF +KVK  +  +  Y EFL+ L+L++++I+ ++ L   V + +G   +LMD F  
Sbjct: 444 AEELSFFDKVKKFIGNKQTYNEFLKVLNLFSQDILDKNLLVERVYNFIGVNEELMDWFKR 503

Query: 408 FLA 410
           F+ 
Sbjct: 504 FVG 506


>gi|297813241|ref|XP_002874504.1| hypothetical protein ARALYDRAFT_911060 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297320341|gb|EFH50763.1| hypothetical protein ARALYDRAFT_911060 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 156

 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 80/156 (51%), Positives = 112/156 (71%), Gaps = 2/156 (1%)

Query: 40  AQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRD 99
           AQ+ T +DA  YL+ V++ FQDK EK+   L+++ DF+++RI T  VI  VK+LFKG R+
Sbjct: 3   AQRPTMSDAREYLRIVENKFQDKPEKFRTLLKLLHDFRSRRIGTKDVITIVKDLFKGQRE 62

Query: 100 LILGFNTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDIL 159
           LILGFNTFLPK YEI   LED + P    V F +AI+F+NK++ RF+ D  VY++F+ +L
Sbjct: 63  LILGFNTFLPKEYEIK--LEDVKAPSPITVGFSDAISFINKVRIRFEDDVAVYRTFITML 120

Query: 160 NMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLP 195
           +M++K   S++EVY EV  LFQ+H DL  EF +FLP
Sbjct: 121 SMFQKGRMSLSEVYNEVNLLFQEHNDLCLEFYNFLP 156


>gi|221040854|dbj|BAH12128.1| unnamed protein product [Homo sapiens]
          Length = 720

 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 90/226 (39%), Positives = 132/226 (58%), Gaps = 9/226 (3%)

Query: 530 LGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEE 589
           L  +VLND WVS  S SED +F   +K  YEE L RCED+RFELD++LE+   T + +E 
Sbjct: 9   LLVQVLNDTWVSFPSWSEDSTFVSSKKTPYEEQLHRCEDERFELDVVLETNLATIRVLES 68

Query: 590 LLEKINNNTIKTDGPIRVEDH----FTALNLRCIERLYGDHGLDVMDVLRKNASLALPVI 645
           + +K++    +     R++D        +  R I R+YGD   ++++ L+KN   A+PV+
Sbjct: 69  VQKKLSRMAPEDQEKFRLDDSQGGTSEVIQRRAIYRIYGDKAPEIIESLKKNPVTAVPVV 128

Query: 646 LTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKE 705
           L RLK K+EEW   +  FNK+W E Y K Y KSLDH++  FKQ D+K+L +K+L  EI+ 
Sbjct: 129 LKRLKAKEEEWREAQQGFNKIWREQYEKAYLKSLDHQAVNFKQNDTKALRSKSLLNEIES 188

Query: 706 ISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLIKY 751
           + ++ +++          +  S  PHL F Y D  I ED   LI Y
Sbjct: 189 VYDEHQEQHS-----EGRSAPSSEPHLIFVYEDRQILEDAAALISY 229


>gi|50305031|ref|XP_452473.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49641606|emb|CAH01324.1| KLLA0C06182p [Kluyveromyces lactis]
          Length = 1519

 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 100/279 (35%), Positives = 149/279 (53%), Gaps = 27/279 (9%)

Query: 486  YSSKDKYLAKPIQE---LDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS- 541
            Y  K K++   + E   LDL  CE C PSY+ LPK+      S R E+  EVLND WV  
Sbjct: 752  YQEKPKHIENIVHEKHRLDLDLCEACGPSYKKLPKDDTFMPCSGRDEMCWEVLNDEWVGH 811

Query: 542  VTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKT 601
                SED  F   RKNQYE++LF+ E++R E D  +ES   T + +E +  KI N T + 
Sbjct: 812  PVWASEDSGFIAHRKNQYEDTLFKVEEERHEYDFYIESNLRTIQTLETIANKIANMTNEE 871

Query: 602  DGPIRVEDHF--TALNL--RCIERLY-GDHGLDVMDVLRKNASLALPVILTRLKQKQEEW 656
                ++      T+L +  + + ++Y  D G +++D L ++ ++ +P++L RLKQK EEW
Sbjct: 872  KNNFKLPPGLGHTSLTIYKKVVRKVYDKDRGFEIIDALHEHPAVTVPIVLKRLKQKDEEW 931

Query: 657  ARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDV 716
             R + ++NKVW E+  K Y+KSLDH    FKQ D K L  K L +EI  I          
Sbjct: 932  RRAQREWNKVWRELEQKVYYKSLDHLGLTFKQADKKLLTTKQLLSEISSIK--------- 982

Query: 717  LLAIAAGNRR--SIVP----HLEFEYSDPDIHEDLYQLI 749
               +   N+R   + P     L+FE +D ++  D+  L+
Sbjct: 983  ---VDQTNKRIHPLTPKPKSQLDFEINDREVLYDILDLV 1018



 Score = 89.4 bits (220), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 41/72 (56%), Positives = 52/72 (72%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
           L   DAL+YL+ VK  F  + + Y+ FL++MKDFK+Q IDT GVI RV  LF+G  +LI 
Sbjct: 204 LNVKDALSYLEQVKFQFSSRPDVYNHFLDIMKDFKSQAIDTPGVIQRVTTLFQGFPNLIQ 263

Query: 103 GFNTFLPKGYEI 114
           GFNTFLP GY+I
Sbjct: 264 GFNTFLPHGYKI 275



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 41/70 (58%), Positives = 52/70 (74%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           VEF  AI++VNKIKTRF     +YK FL+IL  Y++E K I EVY +V  LFQ++PDLL+
Sbjct: 425 VEFSHAISYVNKIKTRFADQPDIYKQFLEILQTYQREQKPIHEVYAQVTILFQNNPDLLD 484

Query: 189 EFTHFLPDSS 198
           +F  FLPDSS
Sbjct: 485 DFKKFLPDSS 494



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 44/79 (55%)

Query: 117 PLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEV 176
           PL+  Q    +P+  ++A++++ ++K +F     VY  FLDI+  ++ +      V Q V
Sbjct: 192 PLQQAQYSSYRPLNVKDALSYLEQVKFQFSSRPDVYNHFLDIMKDFKSQAIDTPGVIQRV 251

Query: 177 EALFQDHPDLLEEFTHFLP 195
             LFQ  P+L++ F  FLP
Sbjct: 252 TTLFQGFPNLIQGFNTFLP 270



 Score = 48.1 bits (113), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 8/88 (9%)

Query: 30  QVVGGGGG-----GGAQK---LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRI 81
           ++V  GGG      G QK   +  + A++Y+  +K  F D+ + Y  FLE+++ ++ ++ 
Sbjct: 404 KIVAAGGGMLGALPGQQKTGEVEFSHAISYVNKIKTRFADQPDIYKQFLEILQTYQREQK 463

Query: 82  DTAGVIARVKELFKGHRDLILGFNTFLP 109
               V A+V  LF+ + DL+  F  FLP
Sbjct: 464 PIHEVYAQVTILFQNNPDLLDDFKKFLP 491



 Score = 45.1 bits (105), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 41/69 (59%), Gaps = 2/69 (2%)

Query: 352 ELSFCEKVKDKL--RDDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFL 409
           E++F E+VK  +  +  Y EFL+ L+LY+++++T SEL S V   L    +L D F  F+
Sbjct: 691 EVTFFERVKRFIGNKQVYAEFLKILNLYSQDLLTTSELVSKVEFYLHSSKELFDWFKSFV 750

Query: 410 ARCEKSEEL 418
              EK + +
Sbjct: 751 GYQEKPKHI 759



 Score = 43.9 bits (102), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 1/71 (1%)

Query: 124 PPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDH 183
           PP+  +   + + F  ++K RF G+  VY  FL ILN+Y ++  + +E+  +VE      
Sbjct: 681 PPEDAIALGDEVTFFERVK-RFIGNKQVYAEFLKILNLYSQDLLTTSELVSKVEFYLHSS 739

Query: 184 PDLLEEFTHFL 194
            +L + F  F+
Sbjct: 740 KELFDWFKSFV 750



 Score = 41.2 bits (95), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 3/64 (4%)

Query: 349 FSQELSFCEKVKDKLRDD---YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGF 405
           FS  +S+  K+K +  D    Y++FL  L  Y +E     E+ + V  L    PDL+D F
Sbjct: 427 FSHAISYVNKIKTRFADQPDIYKQFLEILQTYQREQKPIHEVYAQVTILFQNNPDLLDDF 486

Query: 406 NGFL 409
             FL
Sbjct: 487 KKFL 490


>gi|296421064|ref|XP_002840086.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295636298|emb|CAZ84277.1| unnamed protein product [Tuber melanosporum]
          Length = 1394

 Score =  157 bits (396), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 87/197 (44%), Positives = 107/197 (54%), Gaps = 34/197 (17%)

Query: 35  GGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELF 94
           G  G    L   DAL+YL  VK  FQD+ + Y+ FL++MKDFK+Q IDT GVI RV  LF
Sbjct: 200 GFQGAHGHLNVKDALSYLDQVKFQFQDQPDVYNKFLDIMKDFKSQTIDTPGVIDRVSTLF 259

Query: 95  KGHRDLILGFNTFLPKGYEI-------------TLPLE---------------------D 120
            GH  LI GFNTFLP GY I             T P                       +
Sbjct: 260 SGHPSLIQGFNTFLPPGYRIECSQDPRDTKITVTTPSGIHHAASGGEVSIGGDRSGMQLN 319

Query: 121 EQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALF 180
             P    PVEF  AI++VNKIK RF     +YK+FL+IL  Y++E+K I +VY +V  LF
Sbjct: 320 TAPLAAGPVEFNHAISYVNKIKNRFAQQPDIYKNFLEILQTYQRESKPIQDVYSQVTQLF 379

Query: 181 QDHPDLLEEFTHFLPDS 197
              PDLLE+F  FLP+S
Sbjct: 380 HSAPDLLEDFKQFLPES 396



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 105/336 (31%), Positives = 161/336 (47%), Gaps = 34/336 (10%)

Query: 497 IQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMR 555
           + ++ L+ C    PSYRLLPK       S R E+  EVLND W S  T  SED  F   +
Sbjct: 605 VNKVRLNLCRGLGPSYRLLPKLEAQKPCSGRDEMCWEVLNDQWASHPTWASEDSGFVAHK 664

Query: 556 KNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFTA-- 613
           KNQYE+ L R E++R + D  +E+ + T + +E + ++I N T +     R+        
Sbjct: 665 KNQYEDILHRIEEERHDYDFNIEANSRTIQLLEPIAQRIANMTPEEKANFRLTPGLGGQS 724

Query: 614 --LNLRCIERLY-GDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEI 670
             +  R I+++Y  + GL+V+++L  N  + +P++L RLK K+EEW   + ++ +VW + 
Sbjct: 725 KTIYQRIIKKVYDKEKGLEVIEMLHNNPVVTVPIVLKRLKSKEEEWKAAQREWQRVWRDQ 784

Query: 671 YSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVP 730
            +K + KSLDH+    K  D K+   KAL  +I    + K K  DV       +   I  
Sbjct: 785 TAKVFWKSLDHQGITVKANDKKAFSTKALVNDI----QAKYKSQDVR---RQSSTTPIAE 837

Query: 731 H-LEFEYSDPDIHEDLYQLIKYSCGEMCT-----TEQLDKVMKIWTTFLEPMLGVPSRPQ 784
           H   + + D  I  D  +L+  S     T      E++D  +K   +F+    G+ SR  
Sbjct: 838 HQFTYMFGDFGIILDASRLLAVSLEHSNTFSANDREKIDYFIK---SFIPLFFGMNSR-- 892

Query: 785 GAEDTEDVVKAKSHTVKSRAASVGDSDGSPDGDAAA 820
              D ED       TV S A    D DG     AA 
Sbjct: 893 ---DVED-------TVNSIARKSPDDDGDEGSPAAG 918



 Score = 44.3 bits (103), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 46/93 (49%), Gaps = 8/93 (8%)

Query: 26  SGQTQVVGGGGGG--------GAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFK 77
           SG    +GG   G         A  +  N A++Y+  +K+ F  + + Y +FLE+++ ++
Sbjct: 303 SGGEVSIGGDRSGMQLNTAPLAAGPVEFNHAISYVNKIKNRFAQQPDIYKNFLEILQTYQ 362

Query: 78  AQRIDTAGVIARVKELFKGHRDLILGFNTFLPK 110
            +      V ++V +LF    DL+  F  FLP+
Sbjct: 363 RESKPIQDVYSQVTQLFHSAPDLLEDFKQFLPE 395



 Score = 42.0 bits (97), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 22/77 (28%), Positives = 45/77 (58%), Gaps = 2/77 (2%)

Query: 350 SQELSFCEKVKDKL--RDDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNG 407
           ++EL+F ++VK  +  +  Y EFL+ L+L++ ++I +  L   V + +    +LMD F  
Sbjct: 527 TEELAFFDRVKKFIGNKQTYNEFLKLLNLFSHDLIAKDMLVDKVSNFISGNKELMDWFKR 586

Query: 408 FLARCEKSEELLADVMS 424
           F+    K+++L+ +  S
Sbjct: 587 FVGYDGKADDLIDNAPS 603


>gi|156844443|ref|XP_001645284.1| hypothetical protein Kpol_1037p22 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156115944|gb|EDO17426.1| hypothetical protein Kpol_1037p22 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 1496

 Score =  156 bits (395), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 94/230 (40%), Positives = 128/230 (55%), Gaps = 9/230 (3%)

Query: 486 YSSKDKYLAKPIQE---LDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS- 541
           +  K K++   + E   LDL  CE C PSY+ LPK       S R E+  EVLND WV  
Sbjct: 680 FQDKPKHIENVVHEKHKLDLDLCEACGPSYKKLPKTDTFMPCSGRDEMCWEVLNDEWVGH 739

Query: 542 VTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKT 601
               SED  F   RKNQYEE+LF+ E++R E D  +ES   T + +E +  KI N T + 
Sbjct: 740 PVWASEDSGFIAHRKNQYEETLFKIEEERHEYDFYIESNLRTIQTLETIASKIANMTEEE 799

Query: 602 DG----PIRVEDHFTALNLRCIERLY-GDHGLDVMDVLRKNASLALPVILTRLKQKQEEW 656
                 PI +    T +  + I ++Y  + G +++D L +  S+A+PV+L RLKQK +EW
Sbjct: 800 KQAFKLPIGLGHTSTTIYQKVIRKVYDKERGFEIIDALHEYPSVAVPVVLKRLKQKDKEW 859

Query: 657 ARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEI 706
            R + ++NKVW E+  K + KSLDH    FKQ D K L  K L AEI  I
Sbjct: 860 RRAQREWNKVWRELEQKVFFKSLDHLGLTFKQSDKKLLTTKQLLAEISSI 909



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 42/78 (53%), Positives = 54/78 (69%)

Query: 37  GGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKG 96
           G   + L   DAL YL+ VK  F  + + Y+ FL++MKDFK+Q IDT GVI RV  LF+G
Sbjct: 118 GSYYRPLNVKDALTYLEQVKLQFNSRPDIYNHFLDIMKDFKSQSIDTPGVIERVSTLFRG 177

Query: 97  HRDLILGFNTFLPKGYEI 114
           + +LI GFNTFLP+GY I
Sbjct: 178 YPNLIQGFNTFLPQGYTI 195



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 39/74 (52%), Positives = 54/74 (72%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           VEF +A+++VNKIK RF     +YK FL+IL  Y++E K I+EVY +V  LFQ+ PDLL+
Sbjct: 361 VEFSQAVSYVNKIKNRFADQPDIYKHFLEILQTYQREQKPISEVYAQVTVLFQNAPDLLD 420

Query: 189 EFTHFLPDSSGAAS 202
           +F  FLPDSS + +
Sbjct: 421 DFKKFLPDSSPSVT 434



 Score = 49.3 bits (116), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 19/69 (27%), Positives = 41/69 (59%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDL 186
           +P+  ++A+ ++ ++K +F     +Y  FLDI+  ++ ++     V + V  LF+ +P+L
Sbjct: 122 RPLNVKDALTYLEQVKLQFNSRPDIYNHFLDIMKDFKSQSIDTPGVIERVSTLFRGYPNL 181

Query: 187 LEEFTHFLP 195
           ++ F  FLP
Sbjct: 182 IQGFNTFLP 190



 Score = 45.1 bits (105), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 3/64 (4%)

Query: 349 FSQELSFCEKVKDKLRDD---YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGF 405
           FSQ +S+  K+K++  D    Y+ FL  L  Y +E    SE+ + V  L    PDL+D F
Sbjct: 363 FSQAVSYVNKIKNRFADQPDIYKHFLEILQTYQREQKPISEVYAQVTVLFQNAPDLLDDF 422

Query: 406 NGFL 409
             FL
Sbjct: 423 KKFL 426



 Score = 44.7 bits (104), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 20/62 (32%), Positives = 38/62 (61%)

Query: 48  ALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTF 107
           A++Y+  +K+ F D+ + Y  FLE+++ ++ ++   + V A+V  LF+   DL+  F  F
Sbjct: 366 AVSYVNKIKNRFADQPDIYKHFLEILQTYQREQKPISEVYAQVTVLFQNAPDLLDDFKKF 425

Query: 108 LP 109
           LP
Sbjct: 426 LP 427



 Score = 42.7 bits (99), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 45/77 (58%), Gaps = 7/77 (9%)

Query: 123 PPPKKPVE-----FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVE 177
           P P +P+E      EEA NF +K K +F G+  VY  FL ILN+Y ++  S+ ++ ++V+
Sbjct: 604 PEPTEPIEESLSLVEEA-NFFDKAK-KFIGNKQVYVEFLKILNLYSQDILSLDDLIEKVD 661

Query: 178 ALFQDHPDLLEEFTHFL 194
                + +L + F +F+
Sbjct: 662 YYLGSNKELFDWFKNFV 678


>gi|47225661|emb|CAG08004.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 958

 Score =  156 bits (394), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 80/189 (42%), Positives = 118/189 (62%), Gaps = 4/189 (2%)

Query: 498 QELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKN 557
           +E+D ++C+R   SYR LPK Y  P  S RT L  EVLND WVS  S SED +F   +K 
Sbjct: 347 REVDYASCKRLGSSYRALPKTYQQPKCSGRTALCKEVLNDTWVSFPSWSEDSTFVSSKKT 406

Query: 558 QYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFT----A 613
            YEE L RCED+RFELD++LE+   T + +E + +K++  + +     R++D        
Sbjct: 407 PYEEQLHRCEDERFELDVVLETNLATIRVLESVQKKLSRLSPEDQDRFRLDDCLGGTSEV 466

Query: 614 LNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSK 673
           +  R + R+YGD   ++++ L+++ + A+PV+L RLK K+EEW   +  FNK+W E Y K
Sbjct: 467 IQRRAVYRIYGDKAPEIIEGLKRSPATAVPVVLKRLKAKEEEWREAQQGFNKLWREQYEK 526

Query: 674 NYHKSLDHR 682
            Y KSLDH+
Sbjct: 527 AYLKSLDHQ 535



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 82/192 (42%), Positives = 108/192 (56%), Gaps = 41/192 (21%)

Query: 47  DALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNT 106
           DAL+YL  VK  F +    Y+ FL++MK+FK+Q IDT GVI RV +LF GH DL+LGFN 
Sbjct: 3   DALSYLDQVKIRFANDPGIYNKFLDIMKEFKSQSIDTPGVINRVSQLFHGHPDLVLGFNA 62

Query: 107 FLPKGYEI--------------TLPLEDEQ-----------PPPKK--PVEFEEAINFVN 139
           FLP GY I              +LPL + +           PP  +  PVEF+ AIN+VN
Sbjct: 63  FLPPGYRIEIPKNGVAFHQSQLSLPLSNRESQNQATTSSVSPPASETSPVEFDSAINYVN 122

Query: 140 KIKTRFQGDDHVYKSFLDILNMYRKENKSIT--------------EVYQEVEALFQDHPD 185
           KIK RF     +Y+SFL+IL+ Y+KE   +               EV+ +V +LF+   D
Sbjct: 123 KIKNRFLDHPEIYRSFLEILHTYQKEQLEVKESRGGRGSSGMTEDEVFSKVASLFKGQED 182

Query: 186 LLEEFTHFLPDS 197
           LL EF  FLPD+
Sbjct: 183 LLAEFGQFLPDA 194



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/64 (35%), Positives = 38/64 (59%)

Query: 132 EEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFT 191
           E+A+++++++K RF  D  +Y  FLDI+  ++ ++     V   V  LF  HPDL+  F 
Sbjct: 2   EDALSYLDQVKIRFANDPGIYNKFLDIMKEFKSQSIDTPGVINRVSQLFHGHPDLVLGFN 61

Query: 192 HFLP 195
            FLP
Sbjct: 62  AFLP 65



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 29/75 (38%), Positives = 46/75 (61%), Gaps = 4/75 (5%)

Query: 351 QELSFCEKVKD--KLRDDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGF 408
           +E SF +KV+   K ++ Y+ FLRC+ L+ +E+++ +EL  LV   LG++P+L   F  F
Sbjct: 264 REFSFFDKVRRLFKSQEVYENFLRCIALFNQEVVSGAELLQLVTPFLGKFPELYTQFKSF 323

Query: 409 LARCEKSEEL--LAD 421
           L   E S  +  LAD
Sbjct: 324 LGDKELSHAVSGLAD 338


>gi|363750296|ref|XP_003645365.1| hypothetical protein Ecym_3033 [Eremothecium cymbalariae
           DBVPG#7215]
 gi|356888999|gb|AET38548.1| Hypothetical protein Ecym_3033 [Eremothecium cymbalariae
           DBVPG#7215]
          Length = 1474

 Score =  155 bits (393), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 98/272 (36%), Positives = 148/272 (54%), Gaps = 15/272 (5%)

Query: 486 YSSKDKYLAKPIQE---LDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS- 541
           Y  K K++   + E   LDL  CE C PSY+ LPK       S R E+  EVLND WV  
Sbjct: 656 YQEKPKHIENIVHEKHRLDLDLCEACGPSYKRLPKADTFMPCSGRDEMCWEVLNDEWVGH 715

Query: 542 VTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKT 601
               SED  F   RKNQYE++LF+ E++R E D  +E+   T + +E +  KI N T + 
Sbjct: 716 PVWASEDSGFIAHRKNQYEDTLFKIEEERHEYDFYIEANLRTIQTLETIANKIANMTPEE 775

Query: 602 DGPIRVEDHF--TALNL--RCIERLY-GDHGLDVMDVLRKNASLALPVILTRLKQKQEEW 656
               ++      T++ +  + I ++Y  D G +++D L +  ++ +P++L RLKQK EEW
Sbjct: 776 KATFKLPPGLGHTSVTIYKKVIRKVYDKDRGYEIIDALHEYPAITVPIVLKRLKQKDEEW 835

Query: 657 ARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDV 716
            R + ++NKVW E+  K + KSLDH    FKQ D K L AK L   I EIS  K  +++ 
Sbjct: 836 RRAQREWNKVWRELEQKVFFKSLDHLGLTFKQADKKLLTAKQL---ISEISSIKVDQNNK 892

Query: 717 LLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQL 748
            +       +S    L+ +++DP++  D+  L
Sbjct: 893 RIHPLTPKAKS---QLDHDFTDPEVFYDILNL 921



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 42/78 (53%), Positives = 54/78 (69%)

Query: 37  GGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKG 96
           G   + L   DAL+YL+ VK  F  + + Y+ FL++MKDFK+Q IDT GVI RV  LF+G
Sbjct: 157 GSSYRPLNVKDALSYLEQVKFQFNSRPDVYNHFLDIMKDFKSQAIDTPGVIERVSTLFQG 216

Query: 97  HRDLILGFNTFLPKGYEI 114
           +  LI GFNTFLP+GY I
Sbjct: 217 YPTLIQGFNTFLPQGYNI 234



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 40/71 (56%), Positives = 51/71 (71%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           VEF  AI++VNKIKTRF     +YK FL+IL  Y++E K I EVY +V  LFQ+ PDLL+
Sbjct: 352 VEFSHAISYVNKIKTRFADQPDIYKHFLEILQTYQREQKPINEVYAQVTVLFQNAPDLLD 411

Query: 189 EFTHFLPDSSG 199
           +F  FLPD+S 
Sbjct: 412 DFKKFLPDASA 422



 Score = 50.1 bits (118), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 40/69 (57%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDL 186
           +P+  ++A++++ ++K +F     VY  FLDI+  ++ +      V + V  LFQ +P L
Sbjct: 161 RPLNVKDALSYLEQVKFQFNSRPDVYNHFLDIMKDFKSQAIDTPGVIERVSTLFQGYPTL 220

Query: 187 LEEFTHFLP 195
           ++ F  FLP
Sbjct: 221 IQGFNTFLP 229



 Score = 48.5 bits (114), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 44/85 (51%)

Query: 25  PSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTA 84
           P  Q Q   G GG     +  + A++Y+  +K  F D+ + Y  FLE+++ ++ ++    
Sbjct: 334 PQRQPQDQFGTGGKKTGDVEFSHAISYVNKIKTRFADQPDIYKHFLEILQTYQREQKPIN 393

Query: 85  GVIARVKELFKGHRDLILGFNTFLP 109
            V A+V  LF+   DL+  F  FLP
Sbjct: 394 EVYAQVTVLFQNAPDLLDDFKKFLP 418



 Score = 44.7 bits (104), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 2/80 (2%)

Query: 351 QELSFCEKVKDKL--RDDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGF 408
           +E SF +K K  +  +  Y EFL+ L+LY+++++ +  L   VG  L   P+L D F  F
Sbjct: 594 EEASFFDKAKKYIGNKQIYTEFLKILNLYSQDLLDKERLVEKVGHYLSGCPELFDWFKSF 653

Query: 409 LARCEKSEELLADVMSKKSL 428
           +   EK + +   V  K  L
Sbjct: 654 VGYQEKPKHIENIVHEKHRL 673



 Score = 40.8 bits (94), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 3/64 (4%)

Query: 349 FSQELSFCEKVKDKLRDD---YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGF 405
           FS  +S+  K+K +  D    Y+ FL  L  Y +E    +E+ + V  L    PDL+D F
Sbjct: 354 FSHAISYVNKIKTRFADQPDIYKHFLEILQTYQREQKPINEVYAQVTVLFQNAPDLLDDF 413

Query: 406 NGFL 409
             FL
Sbjct: 414 KKFL 417


>gi|300176275|emb|CBK23586.2| unnamed protein product [Blastocystis hominis]
          Length = 912

 Score =  155 bits (393), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 95/257 (36%), Positives = 140/257 (54%), Gaps = 17/257 (6%)

Query: 507 RCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRC 566
           +CTPSY LLP +YL    SQR+ L   +LND W+S   GSE+++  +  +N + E+LFR 
Sbjct: 318 KCTPSYHLLPSSYLHRGGSQRSFLEGSLLNDAWISCPIGSENFAAGYAHRNLHAEALFRV 377

Query: 567 EDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVE-DHFTALNLRCIERLYGD 625
           EDD FE D+L+ES    T  +E L   ++    +  GP R+E    +AL+ R I RLY +
Sbjct: 378 EDDHFETDVLIESNRHCTGSLEALARALDA---EGPGPQRLEVGRLSALDRRAIRRLYAE 434

Query: 626 HGLD--VMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRS 683
            G+D  V+++L       LP +L RL++++E W + R+     W  I  +NYH+SLD RS
Sbjct: 435 SGVDGVVLEMLENAPRTTLPRVLRRLREQEERWVKERNVLEAQWRAIQEENYHRSLDTRS 494

Query: 684 FYFKQQDSKSLGAKALSAEIKEISEKK------RKEDDVLLAIA-----AGNRRSIVPHL 732
           F FK QD K+   K     IK  + K+      R+     LA A      G+ +   PHL
Sbjct: 495 FTFKAQDKKNTNIKPFIDAIKVETGKRGNNEASRRLGSFTLARAEQAKREGSDQQSPPHL 554

Query: 733 EFEYSDPDIHEDLYQLI 749
           +F  S P IH  + + +
Sbjct: 555 QFALSIPLIHRVVLRFL 571



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 68/143 (47%), Gaps = 5/143 (3%)

Query: 55  VKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEI 114
           +K  F    +   +FL ++ D+   +I    V+  V +L  G+ +L+  F  F+P  Y  
Sbjct: 1   MKKQFGASSDVVSNFLRLICDYGHNKISIEMVVNSVTQLLSGNSELLSQFYRFVPDQY-- 58

Query: 115 TLPLEDEQPPPKKPVEFEEAI-NFVNKIKTRFQ-GDDHVYKSFLDILNMYRKENKSITEV 172
             P  D   P      +   I  +V++I+ RF+   D  Y  F+ IL  +   + SI+ V
Sbjct: 59  -CPKVDYSYPFGADANYISHIRQYVSRIQERFKDSGDKEYNEFISILRSHANSDFSISSV 117

Query: 173 YQEVEALFQDHPDLLEEFTHFLP 195
            + +  LF  HPDL+ +F  FLP
Sbjct: 118 EERIRKLFHGHPDLVNDFHTFLP 140


>gi|367005130|ref|XP_003687297.1| hypothetical protein TPHA_0J00400 [Tetrapisispora phaffii CBS 4417]
 gi|357525601|emb|CCE64863.1| hypothetical protein TPHA_0J00400 [Tetrapisispora phaffii CBS 4417]
          Length = 1512

 Score =  155 bits (393), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 94/230 (40%), Positives = 128/230 (55%), Gaps = 9/230 (3%)

Query: 486 YSSKDKYLAKPIQE---LDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS- 541
           Y  K K++   + E   LDL  CE   PSY+ LPK       S R E+  EVLND WV  
Sbjct: 713 YQDKPKHIENIVHEKHKLDLDLCEAYGPSYKKLPKTDTFMPCSGRDEMCWEVLNDDWVGH 772

Query: 542 VTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKT 601
               SED  F   RKNQYEE+LF+ E++R E D  +ES   T + +E +  KI N T + 
Sbjct: 773 PVWASEDSGFIAHRKNQYEETLFKIEEERHEYDFYIESNLRTIQTLETIASKIANMTEEE 832

Query: 602 DG----PIRVEDHFTALNLRCIERLYG-DHGLDVMDVLRKNASLALPVILTRLKQKQEEW 656
                 PI +      +  + I ++YG + G +++D L +  ++A+P+IL RLKQK EEW
Sbjct: 833 RANFKLPIGLGHTSVTIYQKVIRKVYGKERGFELIDALHEYPAVAVPIILKRLKQKDEEW 892

Query: 657 ARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEI 706
            R + ++NKVW E+  K Y+KSLDH    FKQ D K L  K L +EI  I
Sbjct: 893 RRAQREWNKVWRELQQKVYYKSLDHLGLTFKQADKKLLTTKQLISEISSI 942



 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 47/99 (47%), Positives = 59/99 (59%), Gaps = 12/99 (12%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
           L   DAL YL+ VK  F  + + Y+ FL++MKDFK+Q IDT GVI RV  LF+G+  LI 
Sbjct: 145 LNVKDALTYLEQVKLQFSSRPDIYNHFLDIMKDFKSQSIDTPGVIERVSTLFRGYPSLIQ 204

Query: 103 GFNTFLPKGYEI------------TLPLEDEQPPPKKPV 129
           GFNTFLP+GY I            T P+  E  P  KP+
Sbjct: 205 GFNTFLPQGYTIECTNNPNDPIKVTTPIGSETIPYAKPI 243



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 39/73 (53%), Positives = 55/73 (75%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           VEF +A+++VNKIK RF  +  +YK+FL+IL  Y+KE K I EVY +V  LFQ+ PDLL+
Sbjct: 352 VEFSQAVSYVNKIKNRFVDEPDIYKTFLEILQTYQKEQKPIHEVYSQVTILFQNAPDLLD 411

Query: 189 EFTHFLPDSSGAA 201
           +F  FLPD++ +A
Sbjct: 412 DFKKFLPDNNNSA 424



 Score = 49.3 bits (116), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 49/100 (49%), Gaps = 10/100 (10%)

Query: 349 FSQELSFCEKVKDKLRDD---YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGF 405
           FSQ +S+  K+K++  D+   Y+ FL  L  Y KE     E+ S V  L    PDL+D F
Sbjct: 354 FSQAVSYVNKIKNRFVDEPDIYKTFLEILQTYQKEQKPIHEVYSQVTILFQNAPDLLDDF 413

Query: 406 NGFL------ARCEKSEELLADVMSKKSL-WNEGRIPKSV 438
             FL      A  E ++ + A+ M  + L  N   IP+ +
Sbjct: 414 KKFLPDNNNSAGAETNQNIQANAMQYQQLHQNNVAIPQHI 453



 Score = 48.1 bits (113), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 19/69 (27%), Positives = 40/69 (57%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDL 186
           +P+  ++A+ ++ ++K +F     +Y  FLDI+  ++ ++     V + V  LF+ +P L
Sbjct: 143 RPLNVKDALTYLEQVKLQFSSRPDIYNHFLDIMKDFKSQSIDTPGVIERVSTLFRGYPSL 202

Query: 187 LEEFTHFLP 195
           ++ F  FLP
Sbjct: 203 IQGFNTFLP 211



 Score = 42.7 bits (99), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 2/80 (2%)

Query: 351 QELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGF 408
           +E +F +K K  + +   Y EFL+ L+LY++ I+  +EL   V   LG   +L D F GF
Sbjct: 651 EETNFFDKAKKFINNKQIYMEFLKILNLYSQNILNVNELVEKVQYYLGSNKELFDWFKGF 710

Query: 409 LARCEKSEELLADVMSKKSL 428
           +   +K + +   V  K  L
Sbjct: 711 VGYQDKPKHIENIVHEKHKL 730



 Score = 41.6 bits (96), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 19/62 (30%), Positives = 37/62 (59%)

Query: 48  ALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTF 107
           A++Y+  +K+ F D+ + Y  FLE+++ ++ ++     V ++V  LF+   DL+  F  F
Sbjct: 357 AVSYVNKIKNRFVDEPDIYKTFLEILQTYQKEQKPIHEVYSQVTILFQNAPDLLDDFKKF 416

Query: 108 LP 109
           LP
Sbjct: 417 LP 418


>gi|388580829|gb|EIM21141.1| hypothetical protein WALSEDRAFT_60595 [Wallemia sebi CBS 633.66]
          Length = 1222

 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 93/231 (40%), Positives = 114/231 (49%), Gaps = 68/231 (29%)

Query: 39  GAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHR 98
           G + L   DAL+YL  VK  FQD  E Y+ FL+ MKDFK+Q IDT GVI RV  LF+GH 
Sbjct: 15  GYRPLNVRDALSYLDQVKLRFQDSPEVYNHFLDTMKDFKSQSIDTPGVIDRVSSLFRGHP 74

Query: 99  DLILGFNTFLPKGYEI-----------------TLPL----------------------- 118
            LI GFNTFLP GY I                 T P+                       
Sbjct: 75  ALIQGFNTFLPPGYRIECSDLSGTNPTGGTITVTTPMGVTTLQASASFLPAWQAQHQPQL 134

Query: 119 --EDEQPPP-------------------------KKP-VEFEEAINFVNKIKTRFQGDDH 150
             ++  PPP                         +KP VEF  AI++VNKIK RF  D  
Sbjct: 135 SQQETLPPPSPTTQYVQAQQSGANTPTAASTLANQKPPVEFNHAISYVNKIKNRFNQDPE 194

Query: 151 VYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAA 201
            YK FL++L  Y+KE ++I EVY +V  LF   PDLL+EF  FLPD++G A
Sbjct: 195 TYKMFLEVLQTYQKEQRTIHEVYAQVNHLFHGAPDLLDEFKQFLPDTTGNA 245



 Score =  145 bits (365), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 86/238 (36%), Positives = 141/238 (59%), Gaps = 9/238 (3%)

Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMRKN 557
           +++L  C++   SYR LP++ +  S S R  +  EVLND WVS  T  SED  F   RKN
Sbjct: 459 KIELEECKKYGASYRKLPQSEVSLSCSGRDAMCWEVLNDEWVSHPTWASEDSGFVAHRKN 518

Query: 558 QYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TA 613
            +EE+L + E++R E D  +E+   T   +E +  +I     +     R++        +
Sbjct: 519 HFEEALHKSEEERHEYDYHIEANLRTITLLEPIAARIAAMDSEERASFRLKPGLGGQSKS 578

Query: 614 LNLRCIERLYG-DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYS 672
           +  R I+++YG +HGL++++ L +N S+A+PV+L RLK K EEW R + ++NKVW E+ +
Sbjct: 579 IYQRIIKKVYGQEHGLEIINALHENPSVAVPVVLNRLKAKDEEWKRAQREWNKVWRELDA 638

Query: 673 KNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISE---KKRKEDDVLLAIAAGNRRS 727
           +NY+KSLDH+   +KQ + K+L +K L  EI+ + +   +KRK     ++ + G  RS
Sbjct: 639 RNYYKSLDHQGIVWKQNEKKNLTSKQLILEIETLRKEQIQKRKSTLFPMSSSTGPIRS 696



 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 2/79 (2%)

Query: 119 EDEQPPPK--KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEV 176
           E EQP  +  +P+   +A+++++++K RFQ    VY  FLD +  ++ ++     V   V
Sbjct: 7   EPEQPVDEGYRPLNVRDALSYLDQVKLRFQDSPEVYNHFLDTMKDFKSQSIDTPGVIDRV 66

Query: 177 EALFQDHPDLLEEFTHFLP 195
            +LF+ HP L++ F  FLP
Sbjct: 67  SSLFRGHPALIQGFNTFLP 85



 Score = 42.7 bits (99), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 3/64 (4%)

Query: 349 FSQELSFCEKVKDKLRDD---YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGF 405
           F+  +S+  K+K++   D   Y+ FL  L  Y KE  T  E+ + V  L    PDL+D F
Sbjct: 175 FNHAISYVNKIKNRFNQDPETYKMFLEVLQTYQKEQRTIHEVYAQVNHLFHGAPDLLDEF 234

Query: 406 NGFL 409
             FL
Sbjct: 235 KQFL 238


>gi|344233088|gb|EGV64961.1| hypothetical protein CANTEDRAFT_93195 [Candida tenuis ATCC 10573]
          Length = 1455

 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 95/256 (37%), Positives = 144/256 (56%), Gaps = 12/256 (4%)

Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMRKN 557
           +L+LS C+   PSYR LPK       S R E+  EVLND WV   T  SED  F   RKN
Sbjct: 631 QLELSFCKAYGPSYRQLPKAETYMPCSGRDEMCWEVLNDEWVGHPTWASEDSGFIAHRKN 690

Query: 558 QYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF--TALN 615
           QYEE LFR E++R E D  +E+   T + +E +  +I N T +     ++      T++ 
Sbjct: 691 QYEEILFRIEEERLEYDYHMEANLRTIQTLETIANRIANMTPEQKANFKLPPGLGHTSVT 750

Query: 616 L--RCIERLY-GDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYS 672
           +  + I ++Y  D G +V+D L +N ++A+P++L RLKQK EEW R + ++NKVW E+  
Sbjct: 751 IYKKVIRKIYDKDRGFEVIDALHENPAIAVPIVLKRLKQKDEEWRRAQREWNKVWREMEQ 810

Query: 673 KNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHL 732
           K ++KSLDH    FKQ D K L  K L +EI  +  K  +++  L  +    +      L
Sbjct: 811 KVFYKSLDHLGLTFKQADKKLLTTKQLISEISTV--KVEQQNKRLYPLTPKPQE----QL 864

Query: 733 EFEYSDPDIHEDLYQL 748
            ++++D +I  D+ +L
Sbjct: 865 NYKFNDLEILYDILRL 880



 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 81/203 (39%), Positives = 107/203 (52%), Gaps = 40/203 (19%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
           L   DAL+YL  VK  F ++ + Y++FL++MKDFK+Q IDT GVI RV  LF+GH +LI 
Sbjct: 189 LNVKDALSYLDQVKIQFYNQADVYNNFLDIMKDFKSQSIDTPGVIDRVSTLFRGHPNLIQ 248

Query: 103 GFNTFLPKGYEITLPLEDEQPPPKKPV--------------------------------- 129
           GFNTFLP GY I   ++   P P +                                   
Sbjct: 249 GFNTFLPPGYRIECSMDPSDPNPIRVTTPTGTTTTTKTDWHSDELAASDLVTQQGQQPGQ 308

Query: 130 -------EFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQD 182
                  +   AI +VNKIKTRF     +YK FL+IL  Y++E K I EVY++V  LF +
Sbjct: 309 QPDGNSDQMNHAITYVNKIKTRFANQPDIYKQFLEILQTYQREQKPIAEVYEQVTVLFSN 368

Query: 183 HPDLLEEFTHFLPDSSGAASIHY 205
            PDLL++F  FLPD+S      Y
Sbjct: 369 SPDLLDDFKQFLPDTSAPQPAAY 391



 Score = 53.1 bits (126), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 43/69 (62%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDL 186
           +P+  ++A+++++++K +F     VY +FLDI+  ++ ++     V   V  LF+ HP+L
Sbjct: 187 RPLNVKDALSYLDQVKIQFYNQADVYNNFLDIMKDFKSQSIDTPGVIDRVSTLFRGHPNL 246

Query: 187 LEEFTHFLP 195
           ++ F  FLP
Sbjct: 247 IQGFNTFLP 255



 Score = 46.2 bits (108), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 56/99 (56%), Gaps = 14/99 (14%)

Query: 334 PVSSSYDDKNAMKSMFSQELSFCEKVKDKL--RDDYQEFLRCLHLYTKEIITRSEL---- 387
           P+ SS  ++    S  S+E++F +KVK  +  +  Y +FL+ ++LY+++II +  L    
Sbjct: 539 PIPSSNINRT---SSLSEEINFFDKVKKAIGNKQTYNDFLKIINLYSQDIIDKETLIDRV 595

Query: 388 QSLVGDLLGRYPDLMDGFNGFLARCEKSEELLADVMSKK 426
           +S +GDL    P+L+D F  F+    K  E +  +M KK
Sbjct: 596 ESFIGDL---NPELVDWFKMFVGF--KEPEHIETIMFKK 629


>gi|294658454|ref|XP_460794.2| DEHA2F09900p [Debaryomyces hansenii CBS767]
 gi|202953142|emb|CAG89135.2| DEHA2F09900p [Debaryomyces hansenii CBS767]
          Length = 1445

 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 86/214 (40%), Positives = 125/214 (58%), Gaps = 6/214 (2%)

Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMRKN 557
           +L+LS C    PSYR LPK       S R E+  EVLND WV   T  SED  F   RKN
Sbjct: 595 QLELSLCRAYGPSYRQLPKAETYMPCSGRDEMCWEVLNDEWVGHPTWASEDSGFIAHRKN 654

Query: 558 QYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF--TALN 615
           QYEE LF+ E++R E D ++ES   T + +E +  +I N T +     ++      T++ 
Sbjct: 655 QYEEILFKIEEERHEFDFIMESNLRTIQTLETIANRIANMTPEQKASFKLPPGLGHTSMT 714

Query: 616 L--RCIERLY-GDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYS 672
           +  + + ++Y  D G +V+D L +N ++A+P++L RLKQK EEW R + ++NKVW E+  
Sbjct: 715 IYKKVLRKIYDKDRGFEVIDALHENPAIAVPIVLKRLKQKDEEWKRSQREWNKVWREMEQ 774

Query: 673 KNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEI 706
           K ++KSLDH    FKQ D K L  + L +EI  +
Sbjct: 775 KVFYKSLDHLGLTFKQADKKLLTTRQLVSEISTV 808



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 80/312 (25%), Positives = 139/312 (44%), Gaps = 23/312 (7%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           +EF  AI++VNKIKTRF     +YK FL+IL  Y++E K I EVY++V  LF + PDLL+
Sbjct: 296 IEFNHAISYVNKIKTRFANQPDIYKQFLEILQTYQREQKPIGEVYEQVTVLFSNSPDLLD 355

Query: 189 EFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQVHVDKKERAMASHADR------ 242
           +F  FLPD+S    +            + +S +P             ++ +  +      
Sbjct: 356 DFKQFLPDTSNQGYLQQQQENLFYGANNGTSQLPPVGNFQPPTGSTGLSPNGSQGQFQQH 415

Query: 243 --DLSVDRPDPDHDRVLLKSDKDQRRRGEKERERRDDHRRERERDDRDFENDVNRDFSMQ 300
              +    P       +L++++D               RR++      +  D N +   Q
Sbjct: 416 GYPMVPGAPGKQDVAAILEANEDPSMM-----------RRKKSSVSEAYPYDYNYNSESQ 464

Query: 301 RFPHKRKSARKIEDSTAEPLHQGGEGDENFGMHP-VSSSYDDKNAMKSMFSQELSFCEKV 359
               +  +     +     +++ G    N  + P +        A KS  S+E+SF +KV
Sbjct: 465 YSSLRSGAQPSKSNRIGSTINKSGAVVTNPTLVPGIPEPVPPSAAAKSSMSEEISFFDKV 524

Query: 360 KDKL--RDDYQEFLRCLHLYTKEIITRSELQSLVGDLLG-RYPDLMDGFNGFLARCEKSE 416
           K  +  +  Y EFL+ L+L++++II +  L   V   +G  +PDL++ F  F+    K +
Sbjct: 525 KKAIGNKQTYNEFLKILNLFSQDIIDKETLVERVDSFIGDNHPDLLNWFKMFVGYEVKPQ 584

Query: 417 ELLADVMSKKSL 428
            + +    K  L
Sbjct: 585 NIESITFKKHQL 596



 Score = 97.1 bits (240), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 45/83 (54%), Positives = 57/83 (68%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
           L   DAL+YL  VK  F ++ + Y++FL++MKDFK+Q IDT GVI RV  LF+GH +LI 
Sbjct: 143 LNVKDALSYLDQVKIQFYNQADVYNNFLDIMKDFKSQSIDTPGVIDRVSTLFRGHPNLIQ 202

Query: 103 GFNTFLPKGYEITLPLEDEQPPP 125
           GFNTFLP GY I   L+   P P
Sbjct: 203 GFNTFLPPGYRIECSLDPSDPNP 225



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 43/69 (62%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDL 186
           +P+  ++A+++++++K +F     VY +FLDI+  ++ ++     V   V  LF+ HP+L
Sbjct: 141 RPLNVKDALSYLDQVKIQFYNQADVYNNFLDIMKDFKSQSIDTPGVIDRVSTLFRGHPNL 200

Query: 187 LEEFTHFLP 195
           ++ F  FLP
Sbjct: 201 IQGFNTFLP 209



 Score = 42.7 bits (99), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 6/79 (7%)

Query: 38  GGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGH 97
           GG  ++  N A++Y+  +K  F ++ + Y  FLE+++ ++ ++     V  +V  LF   
Sbjct: 293 GG--QIEFNHAISYVNKIKTRFANQPDIYKQFLEILQTYQREQKPIGEVYEQVTVLFSNS 350

Query: 98  RDLILGFNTFLP----KGY 112
            DL+  F  FLP    +GY
Sbjct: 351 PDLLDDFKQFLPDTSNQGY 369


>gi|367017039|ref|XP_003683018.1| hypothetical protein TDEL_0G04400 [Torulaspora delbrueckii]
 gi|359750681|emb|CCE93807.1| hypothetical protein TDEL_0G04400 [Torulaspora delbrueckii]
          Length = 1490

 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 91/230 (39%), Positives = 130/230 (56%), Gaps = 9/230 (3%)

Query: 486 YSSKDKYLAKPIQE---LDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS- 541
           +  K K++   + E   LDL  CE C PSY+ LPK+      S R E+   VLND WV  
Sbjct: 679 FQDKPKHIENIVHEKHRLDLDLCEACGPSYKKLPKSDTFMPCSGRDEMCWAVLNDEWVGH 738

Query: 542 VTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKT 601
               SED  F   RKNQYEE+LF+ E++R E D  +ES   T + +E +  KI N + + 
Sbjct: 739 PVWASEDSGFIAHRKNQYEETLFKIEEERHEYDFYIESNLRTIQTLETIASKIANMSEEE 798

Query: 602 DGPIRVEDHF--TALNL--RCIERLY-GDHGLDVMDVLRKNASLALPVILTRLKQKQEEW 656
               ++      T+L +  + I ++Y  + G +++D L +  ++A+PV+L RLKQK EEW
Sbjct: 799 KATFKLPPGLGHTSLTIYKKVIRKVYDKERGFEIIDALHEYPAIAVPVVLKRLKQKDEEW 858

Query: 657 ARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEI 706
            R + ++NKVW E+  K Y+KSLDH    FKQ D K L  K L +EI  I
Sbjct: 859 RRAQREWNKVWRELEQKVYYKSLDHLGLTFKQADKKLLTTKQLISEIGSI 908



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 42/74 (56%), Positives = 54/74 (72%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           VEF +AIN+VNKIK RF     +YK FL+IL  Y++E K I EVY +V  LFQ+ PDLL+
Sbjct: 380 VEFSQAINYVNKIKNRFAEQPDIYKHFLEILQTYQREQKPINEVYAQVTVLFQNAPDLLD 439

Query: 189 EFTHFLPDSSGAAS 202
           +F  FLPDSS +A+
Sbjct: 440 DFKKFLPDSSPSAN 453



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 43/81 (53%), Positives = 55/81 (67%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
           L   DAL+YL+ VK  F  + + Y+ FL++MKDFK+Q IDT GVI RV  LFKG+  LI 
Sbjct: 194 LNVKDALSYLEQVKYQFNSRPDVYNHFLDIMKDFKSQAIDTPGVIDRVSTLFKGYPGLIQ 253

Query: 103 GFNTFLPKGYEITLPLEDEQP 123
           GFNTFLP+GY I      ++P
Sbjct: 254 GFNTFLPQGYRIECSANPDEP 274



 Score = 47.4 bits (111), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 20/69 (28%), Positives = 39/69 (56%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDL 186
           +P+  ++A++++ ++K +F     VY  FLDI+  ++ +      V   V  LF+ +P L
Sbjct: 192 RPLNVKDALSYLEQVKYQFNSRPDVYNHFLDIMKDFKSQAIDTPGVIDRVSTLFKGYPGL 251

Query: 187 LEEFTHFLP 195
           ++ F  FLP
Sbjct: 252 IQGFNTFLP 260



 Score = 43.5 bits (101), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 24/93 (25%), Positives = 48/93 (51%), Gaps = 3/93 (3%)

Query: 17  PMISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDF 76
           P+  + G+   Q+Q+     G     +  + A+ Y+  +K+ F ++ + Y  FLE+++ +
Sbjct: 357 PLQPAAGQ---QSQLPSNDQGKKTADVEFSQAINYVNKIKNRFAEQPDIYKHFLEILQTY 413

Query: 77  KAQRIDTAGVIARVKELFKGHRDLILGFNTFLP 109
           + ++     V A+V  LF+   DL+  F  FLP
Sbjct: 414 QREQKPINEVYAQVTVLFQNAPDLLDDFKKFLP 446


>gi|313227034|emb|CBY22181.1| unnamed protein product [Oikopleura dioica]
          Length = 993

 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 99/286 (34%), Positives = 151/286 (52%), Gaps = 22/286 (7%)

Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQ 558
           ++D SN      SYR +PK +  P +  +  L + VLND WVS+ + SED  F   +KNQ
Sbjct: 359 DIDYSNARHIGSSYRSMPKEHRRPPS--KDPLASSVLNDVWVSLPTWSEDPQFSSTKKNQ 416

Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TAL 614
           YE+++ RCED+RFELD ++E+   T K  E + +K+           ++ED        +
Sbjct: 417 YEDAIIRCEDERFELDNVIEANLHTIKIFEGVQKKMQRMKDDERVKFKLEDTLGGTSNVI 476

Query: 615 NLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKN 674
             R I R+YGD   D++D L+K+ SL +PV+L RLK K EEW + +  FN++W ++  KN
Sbjct: 477 QRRAIHRIYGDKAADIIDGLKKSPSLTVPVVLKRLKAKNEEWRQSQKHFNRMWKDLLDKN 536

Query: 675 YHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEF 734
           Y KS+DH+   F+  D K L  K L  EI+         D++ L    GN     PH   
Sbjct: 537 YLKSMDHQGMNFRATDQKFLRPKNLINEIEATC------DEMAL---QGNENK--PHYHT 585

Query: 735 EYSDPDIHEDLYQLIKYSCGEMCTT----EQLDKVMKIWT-TFLEP 775
              D  + +D   LI ++  +   T    EQ+ +++  W  +FL P
Sbjct: 586 RVPDRRVIKDATSLIMHAVRKHNLTKPEKEQVKEIVNRWLPSFLRP 631



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 78/170 (45%), Positives = 116/170 (68%), Gaps = 10/170 (5%)

Query: 35  GGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELF 94
           GG G  + L   DAL+YL  VK+ F D++  Y++FLE+MK+FK+Q  DT GVI RV+ELF
Sbjct: 3   GGDGANRPLRVIDALSYLDRVKNQFDDRQVIYNEFLEIMKEFKSQSTDTPGVIRRVRELF 62

Query: 95  KGHRDLILGFNTFLPKGYEI----TLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDH 150
           +G+ +LI+GFNTFLP+GYEI     + LE++ P      +F+EAIN + KI+TR+  ++ 
Sbjct: 63  RGYPELIIGFNTFLPEGYEIRQEDIMGLEEDHPESNS--QFDEAINLIQKIRTRYLSNNG 120

Query: 151 VYKSFLDILNMYR----KENKSITEVYQEVEALFQDHPDLLEEFTHFLPD 196
           V++ FL ILN Y+    K  +   +VY ++  L ++  DLL+EFT+FLP+
Sbjct: 121 VFREFLTILNEYKRVQPKTQEMTADVYSKMAHLLRNDLDLLDEFTNFLPE 170



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/71 (39%), Positives = 42/71 (59%), Gaps = 2/71 (2%)

Query: 344 AMKSMFSQELSFCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDL 401
           A K     EL F +KV++ L+  D Y +FL+C+ LY  EII R+EL  LV  ++G+ P+L
Sbjct: 261 AAKYATDTELIFFQKVQNLLKETDAYHQFLKCISLYNNEIINRNELILLVEPIIGKCPEL 320

Query: 402 MDGFNGFLARC 412
           +  F   L + 
Sbjct: 321 LVEFGKILGKT 331


>gi|410074999|ref|XP_003955082.1| hypothetical protein KAFR_0A05120 [Kazachstania africana CBS 2517]
 gi|372461664|emb|CCF55947.1| hypothetical protein KAFR_0A05120 [Kazachstania africana CBS 2517]
          Length = 1479

 Score =  154 bits (388), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 88/213 (41%), Positives = 126/213 (59%), Gaps = 6/213 (2%)

Query: 500 LDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMRKNQ 558
           LDL  CE C PSY+ LPK+      S R ++  EVLND WV      SED  F   RKNQ
Sbjct: 716 LDLDLCEACGPSYKRLPKSDTFMPCSGRDDMCWEVLNDEWVGHPVWASEDSGFIAHRKNQ 775

Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF--TALNL 616
           YEE+LF+ E++R E D  +ES   T + +E ++ KI+N + +     ++E     T+L +
Sbjct: 776 YEETLFKIEEERHEYDYYIESNLRTIQTLEAIVNKISNMSEEEKKNFKLEPGLGHTSLTI 835

Query: 617 --RCIERLY-GDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSK 673
             + I ++Y  + G +++D L ++ ++A P++L RLKQK EEW R + ++NKVW E+  K
Sbjct: 836 YKKVIRKVYDKERGFEIIDALHEHPAIAAPIVLKRLKQKDEEWRRAQREWNKVWRELEQK 895

Query: 674 NYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEI 706
            Y KSLDH    FKQ D K L  K L +EI  I
Sbjct: 896 VYFKSLDHLGLTFKQADKKLLTIKQLISEISSI 928



 Score = 92.8 bits (229), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 43/81 (53%), Positives = 53/81 (65%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
           L   DAL+YL+ VK  F  + + Y+ FL++MKDFK+Q IDT GVI RV  LF+G+  LI 
Sbjct: 213 LNVKDALSYLEQVKQQFNSRPDIYNQFLDIMKDFKSQTIDTPGVIERVSTLFRGYPSLIQ 272

Query: 103 GFNTFLPKGYEITLPLEDEQP 123
           GFNTFLP GY I  P     P
Sbjct: 273 GFNTFLPTGYRIDCPSNPNDP 293



 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 44/75 (58%), Positives = 55/75 (73%), Gaps = 2/75 (2%)

Query: 126 KKP--VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDH 183
           KKP  VEF +AIN+VNKIK RF     +YK+FL+IL  Y++E K I EVY +V  LFQ+ 
Sbjct: 363 KKPADVEFSQAINYVNKIKNRFADQPDIYKNFLEILQTYQREQKPINEVYAQVTILFQNA 422

Query: 184 PDLLEEFTHFLPDSS 198
           PDLL++F  FLPDSS
Sbjct: 423 PDLLDDFKKFLPDSS 437



 Score = 48.9 bits (115), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 19/69 (27%), Positives = 40/69 (57%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDL 186
           +P+  ++A++++ ++K +F     +Y  FLDI+  ++ +      V + V  LF+ +P L
Sbjct: 211 RPLNVKDALSYLEQVKQQFNSRPDIYNQFLDIMKDFKSQTIDTPGVIERVSTLFRGYPSL 270

Query: 187 LEEFTHFLP 195
           ++ F  FLP
Sbjct: 271 IQGFNTFLP 279



 Score = 44.7 bits (104), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 28/109 (25%), Positives = 54/109 (49%), Gaps = 3/109 (2%)

Query: 4   SRDEVYMNSQIKRPMISSRGEPSGQTQVVGGGGGGGAQK---LTTNDALAYLKAVKDIFQ 60
           S++ +   +QI    IS+    +   Q V        +K   +  + A+ Y+  +K+ F 
Sbjct: 326 SQNNMMQQAQIPIGSISNNANLNAAVQSVDDQAKQANKKPADVEFSQAINYVNKIKNRFA 385

Query: 61  DKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLP 109
           D+ + Y +FLE+++ ++ ++     V A+V  LF+   DL+  F  FLP
Sbjct: 386 DQPDIYKNFLEILQTYQREQKPINEVYAQVTILFQNAPDLLDDFKKFLP 434



 Score = 44.7 bits (104), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 3/72 (4%)

Query: 349 FSQELSFCEKVKDKLRDD---YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGF 405
           FSQ +++  K+K++  D    Y+ FL  L  Y +E    +E+ + V  L    PDL+D F
Sbjct: 370 FSQAINYVNKIKNRFADQPDIYKNFLEILQTYQREQKPINEVYAQVTILFQNAPDLLDDF 429

Query: 406 NGFLARCEKSEE 417
             FL    K ++
Sbjct: 430 KKFLPDSSKEQQ 441


>gi|384501258|gb|EIE91749.1| hypothetical protein RO3G_16460 [Rhizopus delemar RA 99-880]
          Length = 1578

 Score =  154 bits (388), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 92/234 (39%), Positives = 117/234 (50%), Gaps = 58/234 (24%)

Query: 17  PMISSRGE---PSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVM 73
           P + S G    PS   QV         + L   DAL+YL  VK  F D+ E Y+ FL++M
Sbjct: 60  PPLPSNGTFDRPSTSNQVY--------RPLNVKDALSYLDQVKVKFSDQPEVYNRFLDIM 111

Query: 74  KDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLED------------- 120
           K+FK+Q IDT GVI RV  LF+GH  LI GFNTFLP GY I   ++D             
Sbjct: 112 KEFKSQAIDTPGVIERVSSLFRGHPTLISGFNTFLPPGYRIECSVDDHARDVIKVTTPSG 171

Query: 121 ----------------------------------EQPPPKKPVEFEEAINFVNKIKTRFQ 146
                                             ++   + P+EF  AIN+VNKIK RF 
Sbjct: 172 ATTTSTTNNFHFKNAPSTTSFYTPQQQQQQQQVIDEASRRPPIEFNHAINYVNKIKNRFA 231

Query: 147 GDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGA 200
            D  VYK FL+IL  Y+KE + ITEVY +V+ LF    DLL EF  FLPD++ +
Sbjct: 232 NDPDVYKQFLEILQTYQKEQRPITEVYSQVQILFNGATDLLSEFKQFLPDTTAS 285



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 94/277 (33%), Positives = 155/277 (55%), Gaps = 22/277 (7%)

Query: 483 MSMYSSKDKYLAK-PIQE--LDLSNCERCTPSYRLLPKNYL-IPSASQRTELGAEVLNDH 538
           M  Y ++DK +   P     LD++ C  C PSYR +PK++  +   + R +L  EVLND 
Sbjct: 386 MVGYQTQDKVIENVPTSSSRLDIAGCPECGPSYRSVPKSWQKLQKCTGRDDLCKEVLNDQ 445

Query: 539 WVS-VTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNN 597
           +VS  T  SED  F   +KN YEESL R E++R++ DM +E+   T   +E + ++I++ 
Sbjct: 446 YVSHPTWASEDGGFIASKKNIYEESLHRVEEERYDYDMNIEANLNTISLLEPISKRISSM 505

Query: 598 TIKTDG----PIRVEDHFTALNLRCIERLYG-DHGLDVMDVLRKNASLALPVILTRLKQK 652
           + +       P+ +      +  R I+++YG + G +V+D L  + + A+P+IL RLKQK
Sbjct: 506 SEEEKKNFKLPVGLGGPSQTIYQRIIKKIYGKEQGAEVIDTLHNHPAQAVPIILKRLKQK 565

Query: 653 QEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRK 712
            EEW + + ++NKVW EI  KNY+K+LD++   FK  D K++  KAL  EI+ I   + +
Sbjct: 566 DEEWRKAQREWNKVWREIEIKNYYKALDYQGVNFKINDRKAMSVKALVTEIEAIRLDQEQ 625

Query: 713 EDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLI 749
           E             S  P   +E+ D  + +D+ +++
Sbjct: 626 ES------------SFKPQFVYEFKDKLLFKDVARIL 650


>gi|254579981|ref|XP_002495976.1| ZYRO0C07524p [Zygosaccharomyces rouxii]
 gi|238938867|emb|CAR27043.1| ZYRO0C07524p [Zygosaccharomyces rouxii]
          Length = 1670

 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 88/213 (41%), Positives = 123/213 (57%), Gaps = 6/213 (2%)

Query: 500  LDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMRKNQ 558
            LDL  CE   PSY+ LPK+      S R E+  EVLND W+      SED  F   RKNQ
Sbjct: 873  LDLDMCEASGPSYKKLPKSDTFMPCSGRDEMCWEVLNDEWIGHPVWASEDSGFIAHRKNQ 932

Query: 559  YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF--TALNL 616
            YEE+LF+ E++R E D  +ES   T + +E +  KI N T +     ++      T+L +
Sbjct: 933  YEETLFKVEEERHEYDFYIESNLRTIQTLETIASKIANMTEEEKANFKLPPGLGHTSLTI 992

Query: 617  --RCIERLY-GDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSK 673
              + I ++Y  + G +++D L ++ ++A+PV+L RLKQK EEW R + ++NKVW E+  K
Sbjct: 993  YKKVIRKVYDKERGFEIIDALHEHPAVAVPVVLKRLKQKDEEWRRAQREWNKVWRELEQK 1052

Query: 674  NYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEI 706
             Y KSLDH    FKQ D K L  K L +EI  I
Sbjct: 1053 VYFKSLDHLGLTFKQADKKLLTTKQLISEISSI 1085



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 41/72 (56%), Positives = 53/72 (73%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
           L   DAL+YL+ VK  F  + + Y+ FL++MKDFK+Q IDT GVI RV  LF+G+ +LI 
Sbjct: 280 LNVKDALSYLEQVKFQFNSRPDVYNHFLDIMKDFKSQAIDTPGVIERVSTLFRGYPNLIQ 339

Query: 103 GFNTFLPKGYEI 114
           GFNTFLP+GY I
Sbjct: 340 GFNTFLPQGYRI 351



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 44/93 (47%), Positives = 57/93 (61%), Gaps = 11/93 (11%)

Query: 115 TLPLEDEQPPPKKP-----------VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYR 163
           T P + E P P +P           VEF +AI++VNKIK RF     +YK FL+IL  Y+
Sbjct: 495 TGPTQPEVPAPVQPQLADQTKKAADVEFSQAISYVNKIKNRFSDQPDIYKHFLEILQTYQ 554

Query: 164 KENKSITEVYQEVEALFQDHPDLLEEFTHFLPD 196
           +E K I EVY +V  LFQ+ PDLL++F  FLPD
Sbjct: 555 REQKPINEVYAQVTVLFQNAPDLLDDFKKFLPD 587



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 46/80 (57%), Gaps = 3/80 (3%)

Query: 116 LPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQE 175
           +PL D+     +P+  ++A++++ ++K +F     VY  FLDI+  ++ +      V + 
Sbjct: 270 IPLHDQY---YRPLNVKDALSYLEQVKFQFNSRPDVYNHFLDIMKDFKSQAIDTPGVIER 326

Query: 176 VEALFQDHPDLLEEFTHFLP 195
           V  LF+ +P+L++ F  FLP
Sbjct: 327 VSTLFRGYPNLIQGFNTFLP 346



 Score = 44.7 bits (104), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 5/81 (6%)

Query: 334 PVSSSYDD--KNAMKSMFSQELSFCEKVKDKLRDD---YQEFLRCLHLYTKEIITRSELQ 388
           PV     D  K A    FSQ +S+  K+K++  D    Y+ FL  L  Y +E    +E+ 
Sbjct: 505 PVQPQLADQTKKAADVEFSQAISYVNKIKNRFSDQPDIYKHFLEILQTYQREQKPINEVY 564

Query: 389 SLVGDLLGRYPDLMDGFNGFL 409
           + V  L    PDL+D F  FL
Sbjct: 565 AQVTVLFQNAPDLLDDFKKFL 585



 Score = 44.3 bits (103), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 20/62 (32%), Positives = 37/62 (59%)

Query: 48  ALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTF 107
           A++Y+  +K+ F D+ + Y  FLE+++ ++ ++     V A+V  LF+   DL+  F  F
Sbjct: 525 AISYVNKIKNRFSDQPDIYKHFLEILQTYQREQKPINEVYAQVTVLFQNAPDLLDDFKKF 584

Query: 108 LP 109
           LP
Sbjct: 585 LP 586


>gi|167518626|ref|XP_001743653.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163777615|gb|EDQ91231.1| predicted protein [Monosiga brevicollis MX1]
          Length = 1599

 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 99/269 (36%), Positives = 151/269 (56%), Gaps = 28/269 (10%)

Query: 499  ELDLSNCERCTPSYRLLPKNYLIPSASQRTELG---AEVLNDHWVSV-TSGSEDYSFKHM 554
            ELDL+ C+R   SYRLLP  +     S R  L    A+VLND +VS     SED SF   
Sbjct: 919  ELDLAKCDRLDQSYRLLPTTHQKLRCSGRRHLEPNIAKVLNDKYVSFPVWTSEDSSFVAS 978

Query: 555  RKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDH---- 610
            +KN +EE+LFRCED+RFELD++LE  N+ T RV E+        +  +  +R ED     
Sbjct: 979  KKNAHEEALFRCEDERFELDLILE-CNLATIRVLEM--------VMHELQLRPEDQRRTY 1029

Query: 611  -FTALNL---------RCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCR 660
             F   NL         + + R+YG    DV+  LR++    +P++L RLKQKQ+EW + +
Sbjct: 1030 SFNIKNLGGRSESIHRKAVSRIYGPRTDDVLQALRRDPYAHIPIVLQRLKQKQQEWRKVQ 1089

Query: 661  SDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAI 720
              +N+ W ++  KNY KSLD++S  FK+ D+ ++ AK + A  K+  E+ RK    L + 
Sbjct: 1090 RAWNESWRDVIEKNYLKSLDNKSSTFKRNDTSAIKAKIIRANFKDKREQARKALKELRSG 1149

Query: 721  AAGNRRSIVPHLEFEYSDPDIHEDLYQLI 749
            A  +R   +P    ++S+ D+ + + Q++
Sbjct: 1150 ADVDRSLYLPRELLDFSE-DVRKYVNQIV 1177



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 82/219 (37%), Positives = 110/219 (50%), Gaps = 55/219 (25%)

Query: 41  QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRD- 99
           Q+L   DAL+YL  VK  F  K + Y+ FL++MKDFK+Q+IDT GVI +V ELF+G+ D 
Sbjct: 583 QRLKVEDALSYLDKVKAQFGSKPQVYNQFLDIMKDFKSQQIDTPGVIKKVSELFEGNPDL 642

Query: 100 -------LILGFNTFLP-------------------------KGYEITLPLEDEQPP--- 124
                  L  G+   +P                         +G     P  +  P    
Sbjct: 643 IVGFNTFLPPGYKIEVPDREKPQQILVSQPGLPSVLHTTAGGRGLTAVKPEIEPTPTERA 702

Query: 125 -------------------PKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKE 165
                              P+K +EF  AI +VNKIK RF     VYK+FL+IL+ Y+KE
Sbjct: 703 VAATPAAAANMAATEADGQPRKQLEFSHAIQYVNKIKNRFATQLGVYKNFLEILHTYQKE 762

Query: 166 NKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIH 204
            KSI EVY +V  LF +H DLL+EF+ FLP++  AA  H
Sbjct: 763 QKSINEVYSQVADLFANHKDLLDEFSQFLPEAVPAAQAH 801



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 44/187 (23%), Positives = 80/187 (42%), Gaps = 30/187 (16%)

Query: 37  GGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKG 96
           G   ++L  + A+ Y+  +K+ F  +   Y +FLE++  ++ ++     V ++V +LF  
Sbjct: 720 GQPRKQLEFSHAIQYVNKIKNRFATQLGVYKNFLEILHTYQKEQKSINEVYSQVADLFAN 779

Query: 97  HRDLILGFNTFLPKGYEITLP--------------------------LEDEQPPPKKPVE 130
           H+DL+  F+ FLP+                                  +  +P P++  E
Sbjct: 780 HKDLLDEFSQFLPEAVPAAQAHAERQRRQQREARRSRSRRASDGESRAKRAKPLPEQLSE 839

Query: 131 F---EEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLL 187
                E + + ++IK   +    VY SFL  LNM+  E  S  ++   VE     H DL 
Sbjct: 840 HGLSTEELAYFDRIKKVLR-PASVYDSFLKCLNMFSHEIISAQDLINLVEEFLSKHHDLF 898

Query: 188 EEFTHFL 194
           + F  F+
Sbjct: 899 DWFKRFV 905


>gi|389740714|gb|EIM81904.1| hypothetical protein STEHIDRAFT_161259 [Stereum hirsutum FP-91666
            SS1]
          Length = 1540

 Score =  153 bits (386), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 121/416 (29%), Positives = 199/416 (47%), Gaps = 65/416 (15%)

Query: 352  ELSFCEKVKDKL--RDDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFL 409
            E  F + VK  L  R+ Y EFL+ ++L+T+  I R+ L   V   +G   +L   F   +
Sbjct: 695  ESQFFDSVKRALNSRETYNEFLKTINLFTQGFIDRARLAKSVRSFIGESGELWGQFREIV 754

Query: 410  ARCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRLD 469
                               W+EG                        +R    RE   ++
Sbjct: 755  G------------------WDEG-----------------------AERREMEREVGAME 773

Query: 470  KSVAFVNKDVGPKMSMYSSKDKYLAKPI-QELDLSNCERCTPSYRLLPKNYLIPSASQRT 528
             ++       G +M M       L +P  +EL++        SYR LP + +    S R 
Sbjct: 774  AAMGGGGIGGGGRMFMVG-----LDRPSKEELNVRYG-----SYRRLPADEINQQCSGRD 823

Query: 529  ELGAEVLNDHWVS-VTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRV 587
            E+  +VLND WVS  T  SED  F   +KN YEE+L R E++R E D  L+++  T   +
Sbjct: 824  EMCRQVLNDEWVSHPTFASEDSGFFTQKKNIYEEALHRSEEERHEYDFHLDAIARTIGVL 883

Query: 588  EELLEKINNNTIKTDGPIRVEDHF----TALNLRCIERLYG-DHGLDVMDVLRKNASLAL 642
            + L  K    + +     +++ +F     A++ R I+++YG + GL+V+D ++ +   A+
Sbjct: 884  DPLDRKSAQMSPEERAAWKLKPNFGGSGKAIHQRIIKKIYGREAGLEVIDAIQHSPGSAI 943

Query: 643  PVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAE 702
            PV++ RLKQK+EEW R + ++NKVW E+ + NY+K+LDH+S  FK  D K+L +KA  ++
Sbjct: 944  PVVVPRLKQKEEEWKRAQREWNKVWREVDAHNYYKALDHQSITFKAADKKALTSKAFVSQ 1003

Query: 703  IKEISEKKRKEDDVLL--AIAAGNRRSIVPHLEFEYSDPDIHEDLYQLIKYSCGEM 756
            I+ + E++  +  +L+    A    R     LEFE +D  +  D  +L       M
Sbjct: 1004 IEAVMEEQMAKRAMLVDPLFARARPRH---QLEFELADEGVLMDCLKLTSSFVARM 1056



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 52/83 (62%), Positives = 61/83 (73%)

Query: 38  GGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGH 97
           GG + L  +DAL+YL AVK  F DK E Y+ FL++MK+FK+Q IDT GVIARV ELF GH
Sbjct: 258 GGERVLNVSDALSYLDAVKIQFHDKPEVYNIFLDIMKEFKSQHIDTPGVIARVSELFHGH 317

Query: 98  RDLILGFNTFLPKGYEITLPLED 120
             LI GFNTFLP GY I + LED
Sbjct: 318 PALIQGFNTFLPAGYRINVGLED 340



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/73 (42%), Positives = 46/73 (63%), Gaps = 5/73 (6%)

Query: 134 AINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI-----TEVYQEVEALFQDHPDLLE 188
           A+++V +IKTRF  D   YK FL+IL+ ++  +        TEVY+E+E LF+D PDL  
Sbjct: 444 AMDYVQRIKTRFSHDPDTYKQFLEILSNHKSNSNDFQFRDQTEVYREIERLFKDAPDLAA 503

Query: 189 EFTHFLPDSSGAA 201
            F  F+P ++G A
Sbjct: 504 AFREFMPLTTGGA 516



 Score = 49.3 bits (116), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 35/63 (55%)

Query: 133 EAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTH 192
           +A+++++ +K +F     VY  FLDI+  ++ ++     V   V  LF  HP L++ F  
Sbjct: 267 DALSYLDAVKIQFHDKPEVYNIFLDIMKEFKSQHIDTPGVIARVSELFHGHPALIQGFNT 326

Query: 193 FLP 195
           FLP
Sbjct: 327 FLP 329


>gi|313221042|emb|CBY31873.1| unnamed protein product [Oikopleura dioica]
          Length = 1015

 Score =  152 bits (384), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 96/279 (34%), Positives = 147/279 (52%), Gaps = 21/279 (7%)

Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQ 558
           ++D SN      SYR +PK +  P +  +  L + VLND WVS+ + SED  F   +KNQ
Sbjct: 417 DIDYSNARHIGSSYRSMPKEHRRPPS--KDPLASSVLNDVWVSLPTWSEDPQFSSTKKNQ 474

Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TAL 614
           YE+++ RCED+RFELD ++E+   T K  E + +K+           ++ED        +
Sbjct: 475 YEDAIIRCEDERFELDNVIEANLHTIKIFEGVQKKMQRMKDDERVKFKLEDTLGGTSNVI 534

Query: 615 NLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKN 674
             R I R+YGD   D++D L+K+ SL +PV+L RLK K EEW + +  FN++W ++  KN
Sbjct: 535 QRRAIHRIYGDKAADIIDGLKKSPSLTVPVVLKRLKAKNEEWRQSQKHFNRMWKDLLDKN 594

Query: 675 YHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEF 734
           Y KS+DH+   F+  D K L  K L  EI+         D++ L    GN     PH   
Sbjct: 595 YLKSMDHQGMNFRATDQKFLRPKNLINEIEATC------DEMAL---QGNENK--PHYHT 643

Query: 735 EYSDPDIHEDLYQLIKYSCGEMCTT----EQLDKVMKIW 769
              D  + +D   LI ++  +   T    EQ+ +++  W
Sbjct: 644 RVPDRRVIKDATSLIMHAVRKHNLTKPEKEQVKEIVNRW 682



 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 49/93 (52%), Positives = 68/93 (73%), Gaps = 4/93 (4%)

Query: 35  GGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELF 94
           GG G  + L   DAL+YL  VK+ F D++  Y++FLE+MK+FK+Q  DT GVI RV+ELF
Sbjct: 3   GGDGANRPLRVIDALSYLDRVKNQFDDRQVIYNEFLEIMKEFKSQSTDTPGVIRRVRELF 62

Query: 95  KGHRDLILGFNTFLPKGYEI----TLPLEDEQP 123
           +G+ +LI+GFNTFLP+GYEI     + LE++ P
Sbjct: 63  RGYPELIIGFNTFLPEGYEIRQEDIMGLEEDHP 95



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/71 (39%), Positives = 42/71 (59%), Gaps = 2/71 (2%)

Query: 344 AMKSMFSQELSFCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDL 401
           A K     EL F +KV++ L+  D Y +FL+C+ LY  EII R+EL  LV  ++G+ P+L
Sbjct: 319 AAKYATDTELIFFQKVQNLLKETDAYHQFLKCISLYNNEIINRNELILLVQPIIGKCPEL 378

Query: 402 MDGFNGFLARC 412
           +  F   L + 
Sbjct: 379 LVEFGKILGKT 389



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 30/76 (39%), Positives = 50/76 (65%), Gaps = 4/76 (5%)

Query: 125 PKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYR----KENKSITEVYQEVEALF 180
           P+   +F+EAIN + KI+TR+  ++ V++ FL ILN Y+    K  +   +VY ++  L 
Sbjct: 187 PESNSQFDEAINLIQKIRTRYLSNNGVFREFLTILNEYKRVQPKTQEMTADVYSKMAHLL 246

Query: 181 QDHPDLLEEFTHFLPD 196
           ++  DLL+EFT+FLP+
Sbjct: 247 RNDLDLLDEFTNFLPE 262



 Score = 46.2 bits (108), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 18/70 (25%), Positives = 42/70 (60%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDL 186
           +P+   +A+++++++K +F     +Y  FL+I+  ++ ++     V + V  LF+ +P+L
Sbjct: 9   RPLRVIDALSYLDRVKNQFDDRQVIYNEFLEIMKEFKSQSTDTPGVIRRVRELFRGYPEL 68

Query: 187 LEEFTHFLPD 196
           +  F  FLP+
Sbjct: 69  IIGFNTFLPE 78


>gi|50551671|ref|XP_503310.1| YALI0D26315p [Yarrowia lipolytica]
 gi|18076824|emb|CAC86053.1| Sin3 protein [Yarrowia lipolytica]
 gi|49649178|emb|CAG81516.1| YALI0D26315p [Yarrowia lipolytica CLIB122]
          Length = 1527

 Score =  152 bits (384), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 88/209 (42%), Positives = 122/209 (58%), Gaps = 5/209 (2%)

Query: 500 LDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMRKNQ 558
           L+LS C    PSYRLLPK+      S R E+  EVLND WV   T  SED  F   RKNQ
Sbjct: 719 LELSLCPPLGPSYRLLPKSERFMPCSGRDEMCWEVLNDEWVGHPTWASEDSGFVAHRKNQ 778

Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVED---HFTALN 615
           YEE L R E++R E D  +E+   + + +E +  +I N + +     R++    H T + 
Sbjct: 779 YEEVLHRVEEERHEYDYYIEANLRSIQTLETISNRIANMSHEERLNFRLQPGLGHGTTIY 838

Query: 616 LRCIERLY-GDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKN 674
            + I ++Y  + GL+V++ L +N  +A+PV+L RLKQK EEW R   ++NKVW E   K 
Sbjct: 839 QKVIRKIYDKERGLEVIEALHENPGIAVPVVLRRLKQKDEEWRRAHREWNKVWRETEQKA 898

Query: 675 YHKSLDHRSFYFKQQDSKSLGAKALSAEI 703
           ++KSLDH    FKQ D K L +K L AE+
Sbjct: 899 FYKSLDHLGLTFKQLDKKMLTSKQLVAEL 927



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 45/87 (51%), Positives = 59/87 (67%)

Query: 128 PVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLL 187
           PVEF  AIN+V+KIK RF   +  YK FL+IL  Y+KE K I EVYQ+V  LF++ PDLL
Sbjct: 461 PVEFNHAINYVHKIKNRFADQEETYKHFLEILQTYQKEQKPIGEVYQQVTILFRNEPDLL 520

Query: 188 EEFTHFLPDSSGAASIHYVPSGRNSIL 214
           ++F  FLPD+SG A+ +    G+   L
Sbjct: 521 DDFKQFLPDTSGEAAAYLEAVGQQQRL 547



 Score = 87.0 bits (214), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 43/85 (50%), Positives = 52/85 (61%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
           L   DAL YL  VK  F D  + Y+ FL++MKDFK+  +DT GVI+RV  LF+G   LI 
Sbjct: 256 LNVTDALTYLDQVKIQFSDNPDVYNRFLDIMKDFKSHTLDTPGVISRVSNLFRGFPHLIE 315

Query: 103 GFNTFLPKGYEITLPLEDEQPPPKK 127
           GFNTFLP GY I    +   P P K
Sbjct: 316 GFNTFLPPGYRIECSGDPSDPHPIK 340



 Score = 47.0 bits (110), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 21/64 (32%), Positives = 36/64 (56%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFN 105
           N A+ Y+  +K+ F D+ E Y  FLE+++ ++ ++     V  +V  LF+   DL+  F 
Sbjct: 465 NHAINYVHKIKNRFADQEETYKHFLEILQTYQKEQKPIGEVYQQVTILFRNEPDLLDDFK 524

Query: 106 TFLP 109
            FLP
Sbjct: 525 QFLP 528



 Score = 45.1 bits (105), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 34/63 (53%)

Query: 133 EAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTH 192
           +A+ +++++K +F  +  VY  FLDI+  ++        V   V  LF+  P L+E F  
Sbjct: 260 DALTYLDQVKIQFSDNPDVYNRFLDIMKDFKSHTLDTPGVISRVSNLFRGFPHLIEGFNT 319

Query: 193 FLP 195
           FLP
Sbjct: 320 FLP 322


>gi|255730349|ref|XP_002550099.1| hypothetical protein CTRG_04396 [Candida tropicalis MYA-3404]
 gi|240132056|gb|EER31614.1| hypothetical protein CTRG_04396 [Candida tropicalis MYA-3404]
          Length = 889

 Score =  152 bits (384), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 88/213 (41%), Positives = 121/213 (56%), Gaps = 6/213 (2%)

Query: 500 LDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMRKNQ 558
           L+LS C+   PSYR LPK       S R E+  EVLND WV   T  SED  F   RKNQ
Sbjct: 30  LELSLCKAYGPSYRQLPKAETYMPCSGRDEMCWEVLNDEWVGHPTWASEDSGFIAHRKNQ 89

Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDG----PIRVEDHFTAL 614
           YEE LF+ E++R E D  +ES   T + +E +  +I N T +       P  +  +   +
Sbjct: 90  YEEILFKIEEERLEFDYYMESNLRTIQILETIANRIANMTPEQKANFKLPPGLGHNSMTI 149

Query: 615 NLRCIERLY-GDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSK 673
             + I ++Y  D G +V+D L  N ++A+P++L RLKQK EEW R + ++NKVW E+  K
Sbjct: 150 YKKVIRKIYDKDRGFEVIDALHDNPAIAVPIVLKRLKQKDEEWKRAQREWNKVWREMEQK 209

Query: 674 NYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEI 706
            ++KSLDH    FKQ D K L  K L +EI  +
Sbjct: 210 VFYKSLDHVGLTFKQADKKLLTVKQLISEISTV 242


>gi|365984673|ref|XP_003669169.1| hypothetical protein NDAI_0C02660 [Naumovozyma dairenensis CBS 421]
 gi|343767937|emb|CCD23926.1| hypothetical protein NDAI_0C02660 [Naumovozyma dairenensis CBS 421]
          Length = 1657

 Score =  151 bits (382), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 96/257 (37%), Positives = 140/257 (54%), Gaps = 12/257 (4%)

Query: 498  QELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMRK 556
             +LDL  CE   PSY+ LPK       S R  +  EVLND WV      SED  F   RK
Sbjct: 822  HKLDLDLCEAYGPSYKKLPKTDTFMPCSGRDAMCWEVLNDEWVGHPVWASEDSGFIAHRK 881

Query: 557  NQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDG----PIRVEDHFT 612
            NQYEE+LF+ E++R E D  +ES   T + +E +  KINN T +       P+ +    +
Sbjct: 882  NQYEETLFKIEEERHEYDFHIESNLRTIQTLETIANKINNMTAEEKKNFKLPVGLGHTSS 941

Query: 613  ALNLRCIERLY-GDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIY 671
             +  + I ++Y  + G +++D L ++ + A+P+IL RLK+K EEW R + ++NKVW E+ 
Sbjct: 942  TIYKKVIRKVYDKERGFEIIDALHEHPAFAVPIILRRLKEKDEEWRRAQREWNKVWRELE 1001

Query: 672  SKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPH 731
             K Y+KSLDH    FKQ D K L  K L   I EIS  +  +++  +       +S    
Sbjct: 1002 QKVYYKSLDHLGLTFKQADKKLLTTKQL---ISEISSIQVDQNNKRIHWLTPKPKS---Q 1055

Query: 732  LEFEYSDPDIHEDLYQL 748
            L+F ++D DI  D+  L
Sbjct: 1056 LDFTFNDHDILVDILDL 1072



 Score = 89.7 bits (221), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 42/72 (58%), Positives = 51/72 (70%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
           L   DAL+YL+ VK  F  +   Y+ FL++MKDFK+Q IDT GVI RV  LFKG+  LI 
Sbjct: 273 LNVKDALSYLEQVKVQFNSQPVIYNQFLDIMKDFKSQTIDTPGVIERVSTLFKGYPVLIQ 332

Query: 103 GFNTFLPKGYEI 114
           GFNTFLP+GY I
Sbjct: 333 GFNTFLPQGYTI 344



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 39/71 (54%), Positives = 52/71 (73%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           VEF +AIN+VNKIKTR+     +YK FL+IL  Y++E K I+EVY++V  LF D PDLLE
Sbjct: 465 VEFSQAINYVNKIKTRYADQPFIYKHFLEILQTYQREEKPISEVYEQVTVLFNDAPDLLE 524

Query: 189 EFTHFLPDSSG 199
           +F  FLP++  
Sbjct: 525 DFKKFLPETPA 535



 Score = 50.1 bits (118), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 21/75 (28%), Positives = 43/75 (57%)

Query: 121 EQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALF 180
           E+ P  +P+  ++A++++ ++K +F     +Y  FLDI+  ++ +      V + V  LF
Sbjct: 265 EEDPEYRPLNVKDALSYLEQVKVQFNSQPVIYNQFLDIMKDFKSQTIDTPGVIERVSTLF 324

Query: 181 QDHPDLLEEFTHFLP 195
           + +P L++ F  FLP
Sbjct: 325 KGYPVLIQGFNTFLP 339



 Score = 44.7 bits (104), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 2/65 (3%)

Query: 351 QELSFCEKVKDKL--RDDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGF 408
           +E SF EKVK  +  +  Y EFL+ L+LY++++++ +EL + V   +G   +L D F  F
Sbjct: 745 EETSFFEKVKKFISSKPIYMEFLKVLNLYSQDLLSTNELVTRVDYYIGSNKELFDWFKTF 804

Query: 409 LARCE 413
           +   E
Sbjct: 805 VGYSE 809


>gi|328767246|gb|EGF77296.1| hypothetical protein BATDEDRAFT_35998 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 1514

 Score =  150 bits (379), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 78/213 (36%), Positives = 129/213 (60%), Gaps = 5/213 (2%)

Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQ 558
           E+DL +C+R   SYR LPK+   P+ S R EL  EVLN+ W+S      +  F   +K  
Sbjct: 714 EIDLRSCKRSGHSYRKLPKDIPRPATSGRDELAKEVLNNDWISHPVYVSETGFVVHKKTP 773

Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVED----HFTAL 614
           YEE++++CE++R+E D+ +ES       +E + +++   + +     R+      +  A+
Sbjct: 774 YEEAMYKCEEERYEFDLNIESNLRVIAMLEPIAKQLQIMSPEERTKFRLSPGLGGYSVAI 833

Query: 615 NLRCIERLY-GDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSK 673
             R I+++Y  D G +V+D L +N ++A+P++L RLKQK EEW R + ++NKVW EI +K
Sbjct: 834 YQRAIKKVYDKDRGAEVIDALHQNPAIAVPIVLKRLKQKDEEWKRSQREWNKVWREIDAK 893

Query: 674 NYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEI 706
           N  K+LDH+  +FK  D K++  K+L  EI+ +
Sbjct: 894 NCAKALDHQGIHFKASDRKAMNVKSLVTEIEVL 926



 Score = 99.8 bits (247), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 45/77 (58%), Positives = 55/77 (71%)

Query: 38  GGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGH 97
            G + L   DAL+YL  VK  F D+ E Y+ FL++MKDFK+Q IDT GVI RV  LF+GH
Sbjct: 217 AGYRPLNVRDALSYLDQVKIQFGDQPEVYNRFLDIMKDFKSQAIDTPGVIERVSSLFRGH 276

Query: 98  RDLILGFNTFLPKGYEI 114
            +LI+GFNTFLP GY I
Sbjct: 277 PNLIMGFNTFLPPGYRI 293



 Score = 90.9 bits (224), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 40/72 (55%), Positives = 52/72 (72%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           + PVEF  AIN+VNKIK RF  +   YK FL+IL  Y++E K I EVY +V+ LF++ PD
Sbjct: 465 RGPVEFNHAINYVNKIKNRFSTEPDTYKQFLEILQTYQREGKPIQEVYAQVQILFKEAPD 524

Query: 186 LLEEFTHFLPDS 197
           LL+EF  FLPD+
Sbjct: 525 LLDEFKQFLPDN 536



 Score = 52.4 bits (124), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 41/69 (59%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDL 186
           +P+   +A+++++++K +F     VY  FLDI+  ++ +      V + V +LF+ HP+L
Sbjct: 220 RPLNVRDALSYLDQVKIQFGDQPEVYNRFLDIMKDFKSQAIDTPGVIERVSSLFRGHPNL 279

Query: 187 LEEFTHFLP 195
           +  F  FLP
Sbjct: 280 IMGFNTFLP 288



 Score = 43.1 bits (100), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 21/64 (32%), Positives = 36/64 (56%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFN 105
           N A+ Y+  +K+ F  + + Y  FLE+++ ++ +      V A+V+ LFK   DL+  F 
Sbjct: 471 NHAINYVNKIKNRFSTEPDTYKQFLEILQTYQREGKPIQEVYAQVQILFKEAPDLLDEFK 530

Query: 106 TFLP 109
            FLP
Sbjct: 531 QFLP 534


>gi|403216457|emb|CCK70954.1| hypothetical protein KNAG_0F02920 [Kazachstania naganishii CBS
           8797]
          Length = 1492

 Score =  150 bits (378), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 105/312 (33%), Positives = 156/312 (50%), Gaps = 29/312 (9%)

Query: 486 YSSKDKYLAKPIQE---LDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS- 541
           Y  K K +   I E   LDL  CE   PSY+ LPK+      S R ++  EVLND WV  
Sbjct: 699 YQDKPKIIENVIHEKHRLDLDLCEAYGPSYKKLPKSDTFMPCSGRDDMCWEVLNDEWVGH 758

Query: 542 VTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKT 601
               SED  F   RKNQYEE+LF+ E++R E D  +ES   T + +E +  KI N T + 
Sbjct: 759 PVWASEDSGFIAHRKNQYEETLFKIEEERHEYDFYIESNLRTIQTLETIASKIANMTEEE 818

Query: 602 DGPIRVEDHF--TALNL--RCIERLY-GDHGLDVMDVLRKNASLALPVILTRLKQKQEEW 656
               ++      T+L +  + I ++Y  + G +++D L ++ ++ +P++L RLKQK EEW
Sbjct: 819 KNMFKLPPGLGHTSLTIYKKIIRKVYDKERGFEIIDELHEHPAITVPIVLKRLKQKDEEW 878

Query: 657 ARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDV 716
            R + ++NKVW E+  K Y KSLDH    FKQ D K L  K L +EI  I          
Sbjct: 879 RRAQREWNKVWRELEQKVYFKSLDHLGLTFKQADKKLLTTKQLISEISSIK--------- 929

Query: 717 LLAIAAGNRRS--IVP----HLEFEYSDPDIHEDLYQLIKYSCGEMCTTEQLDK--VMKI 768
              +   N+R   + P     L+++++D DI  D+  L         T    DK  +  +
Sbjct: 930 ---VDQNNKRMHWLTPKPKKQLDYQFNDMDIIFDIVGLTDVFVDHCSTYSNPDKERLKDL 986

Query: 769 WTTFLEPMLGVP 780
           +  F+     +P
Sbjct: 987 FRVFISLFFFIP 998



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 88/241 (36%), Positives = 115/241 (47%), Gaps = 72/241 (29%)

Query: 32  VGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVK 91
           +GGG     + L   DAL+YL+ VK  F  +   Y+ FL++MKDFK+Q IDT GVI RV 
Sbjct: 210 MGGGIDSPYRPLNVKDALSYLEQVKLQFNSRPYIYNQFLDIMKDFKSQNIDTPGVIERVS 269

Query: 92  ELFKGHRDLILGFNTFLP---------------------------KGYEITL-------- 116
            LFKG   LI GFNTFLP                           +G +IT         
Sbjct: 270 TLFKGFPALIQGFNTFLPQGYRIECSSNPNEPIKVTTPMGVLENVRGSDITADQQPAIGQ 329

Query: 117 ------PLEDEQPPPKKP-------------------------------VEFEEAINFVN 139
                 P++   PPP+                                 VEF +AI++VN
Sbjct: 330 LPTTQSPIQASLPPPQSAHLHLPSTVAAATTVQQSANVHAENEPKKANDVEFSQAISYVN 389

Query: 140 KIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSG 199
           KIK RF     +YK+FL+IL  Y++E K I EVY +V  LF + PDLL++F  FLPDSS 
Sbjct: 390 KIKNRFSDQPDIYKNFLEILQTYQREQKPINEVYAQVTVLFHNAPDLLDDFKKFLPDSSA 449

Query: 200 A 200
           +
Sbjct: 450 S 450



 Score = 47.8 bits (112), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 48/80 (60%), Gaps = 3/80 (3%)

Query: 349 FSQELSFCEKVKDKL--RDDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFN 406
            S+E SF EKVK  +  R  Y EFL+ L+L+++++I   EL + V + L   P+L + F 
Sbjct: 635 LSEETSFFEKVKKNIGNRQIYIEFLKVLNLFSQDLIAVDELVTKVENYLAGQPELFEWFK 694

Query: 407 GFLARCEKSEELLADVMSKK 426
            F+   +K  +++ +V+ +K
Sbjct: 695 NFVGYQDKP-KIIENVIHEK 713



 Score = 45.4 bits (106), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 3/72 (4%)

Query: 349 FSQELSFCEKVKDKLRDD---YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGF 405
           FSQ +S+  K+K++  D    Y+ FL  L  Y +E    +E+ + V  L    PDL+D F
Sbjct: 381 FSQAISYVNKIKNRFSDQPDIYKNFLEILQTYQREQKPINEVYAQVTVLFHNAPDLLDDF 440

Query: 406 NGFLARCEKSEE 417
             FL     S E
Sbjct: 441 KKFLPDSSASNE 452



 Score = 43.5 bits (101), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 5/76 (6%)

Query: 123 PPPKKPVE----FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEA 178
           P P +P+E      E  +F  K+K    G+  +Y  FL +LN++ ++  ++ E+  +VE 
Sbjct: 623 PEPTEPIENNLSLSEETSFFEKVKKNI-GNRQIYIEFLKVLNLFSQDLIAVDELVTKVEN 681

Query: 179 LFQDHPDLLEEFTHFL 194
                P+L E F +F+
Sbjct: 682 YLAGQPELFEWFKNFV 697


>gi|224140839|ref|XP_002323786.1| predicted protein [Populus trichocarpa]
 gi|222866788|gb|EEF03919.1| predicted protein [Populus trichocarpa]
          Length = 642

 Score =  149 bits (377), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 79/187 (42%), Positives = 109/187 (58%), Gaps = 12/187 (6%)

Query: 496 PIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMR 555
           PI+ELDLS C +CTP Y +LP+ +   +   +++    VLND  +SV+S     SFK+ R
Sbjct: 466 PIEELDLSTCAKCTPGYLILPEEHRNNTKRHKSQ----VLNDEVISVSSRLRGNSFKNRR 521

Query: 556 KNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFTALN 615
            NQYE +LF CED++FEL+MLLE         EEL      N  +   P+  +       
Sbjct: 522 LNQYENNLFECEDEQFELNMLLEWFKSADIYAEELGGVTVQNEERNGSPVSFQ------- 574

Query: 616 LRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNY 675
            RCIERLYGD G++V+D+  K+   ALP++ TRL+QK  E    R      W E+Y++NY
Sbjct: 575 -RCIERLYGDQGVEVLDIFHKDTQHALPILRTRLQQKIAELTEYRDSLRSSWIEVYARNY 633

Query: 676 HKSLDHR 682
           HKSL  R
Sbjct: 634 HKSLGLR 640



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 2/84 (2%)

Query: 131 FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEF 190
           F EA +FVNK++ +   DD  Y+ FL I   Y+K +++  +V      L + HPDL EEF
Sbjct: 254 FREATDFVNKLRIKCGADD--YEEFLQIFRFYKKGSRNWVDVCDSGLGLTEGHPDLQEEF 311

Query: 191 THFLPDSSGAASIHYVPSGRNSIL 214
             F+  +      + +P  ++S L
Sbjct: 312 LRFMAITEAKPLTYRLPDLQSSDL 335



 Score = 49.7 bits (117), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 2/63 (3%)

Query: 353 LSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLA 410
           + F E VK  L  +  Y++FL+    Y+K  + R+EL+ +V  L+G YPDLM  F  F  
Sbjct: 380 IGFLENVKKSLSCEVSYKKFLKLFFAYSKGKVERAELEDMVSSLIGNYPDLMGEFLQFWK 439

Query: 411 RCE 413
            CE
Sbjct: 440 NCE 442



 Score = 48.1 bits (113), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 47/190 (24%), Positives = 91/190 (47%), Gaps = 21/190 (11%)

Query: 49  LAYLKAVKDIFQDKR--EKYDDFLEVMKDFKAQRIDTAGVIA--------RVKELFKGHR 98
           + Y+K VK  FQ  +  +K    + + +D         G +A        R+K +  G+ 
Sbjct: 28  INYVKKVKARFQHDQPEKKIRSLIRIAEDAIMSEAARDGAVAGMPQDFQERIKAILGGYN 87

Query: 99  DLILGFNTFLPKGYEITLP-LEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLD 157
           DLI G+N+ +P  ++I+L  +E ++    K   F +A++ +NK +    G+D     F +
Sbjct: 88  DLIDGYNSLMPPCHQISLDDVEKKETEESKKSGFLDAMDSLNKPRIEC-GED----GFEE 142

Query: 158 ILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGR-----NS 212
            LN++++ ++ + +V      L +  PDLLE+   F+P        +++P  R     NS
Sbjct: 143 NLNLFKEGSRVLVDVNDFSPKLTEGRPDLLEDVLRFMPPFEAKPLAYHLPDLRSVDLTNS 202

Query: 213 ILRDRSSAMP 222
            + +R  + P
Sbjct: 203 GVDEREKSSP 212


>gi|388269613|gb|AFK26044.1| transcriptional co-repressor Sin3A, partial [Anser cygnoides]
          Length = 566

 Score =  149 bits (377), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 89/247 (36%), Positives = 141/247 (57%), Gaps = 17/247 (6%)

Query: 540 VSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTI 599
           VS  S SED +F   +K QYEE ++RCED+RFELD++LE+   T + +E + +K++  + 
Sbjct: 1   VSFPSWSEDSTFVSSKKTQYEEHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSA 60

Query: 600 KTDGPIRVEDHF----TALNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEE 655
           +     R+++        ++ + ++R+Y D   D++D LRKN S+A+P++L RLK K+EE
Sbjct: 61  EEQAKFRLDNTLGGTSEVIHRKALQRIYADKAADIIDGLRKNPSVAVPIVLKRLKMKEEE 120

Query: 656 WARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRK--- 712
           W   +  FNKVW E   K Y KSLDH+   FKQ D+K L +K+L  EI+ I +++++   
Sbjct: 121 WREAQRGFNKVWREQNEKYYLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQAS 180

Query: 713 EDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLIKYSCGEMCTTEQLD--KVMKIWT 770
           ED+    +  G      PHL   Y D  I ED   LI +        ++ D  K+ +I  
Sbjct: 181 EDNA--GVPTG------PHLSLAYEDKQILEDAASLIIHHVKRQTGIQKEDKYKIKQIMY 232

Query: 771 TFLEPML 777
            F+  +L
Sbjct: 233 HFIPDLL 239


>gi|353241846|emb|CCA73633.1| related to SIN3-transcription regulatory protein [Piriformospora
           indica DSM 11827]
          Length = 1307

 Score =  149 bits (376), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 129/463 (27%), Positives = 208/463 (44%), Gaps = 79/463 (17%)

Query: 355 FCEKVKDKL--RDDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLARC 412
           F EKVK  L  R+ Y EFL+ L+L+T++II    L       LG   +L       L   
Sbjct: 468 FFEKVKKTLDNRETYDEFLKLLNLFTQDIIDMRTLIDKSATFLGEGSELHLQLRRLLG-- 525

Query: 413 EKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRLDKSV 472
                           W E                          R+R  RE D  + ++
Sbjct: 526 ----------------WTE--------------------------RERLVREPDDTN-TI 542

Query: 473 AFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGA 532
              N  +            Y+  P ++ DL +  +C PSYR +P N    + S R  L  
Sbjct: 543 PVANHAI------------YV--PHEKDDLHH--KCGPSYRRIPANEAHVACSGRDALCR 586

Query: 533 EVLNDHWVS-VTSGSEDYS-FKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEEL 590
            VLND WVS  T  SED S ++  +KN YEE+L +CE++R E D  LE +  T   +E +
Sbjct: 587 SVLNDEWVSHPTWASEDNSGYQSHKKNVYEEALHKCEEERHEFDFHLEIMTKTISALENI 646

Query: 591 LEKINNNTIKTDGPIRVEDHFTALN----LRCIERLYG-DHGLDVMDVLRKNASLALPVI 645
             KI   T +     +++      N     R I+++YG D G++V+  L    ++A+P++
Sbjct: 647 NMKIQQMTNEEKSTFKLKPGLGLPNKSIYQRIIKKVYGKDPGMEVIATLHDCPAIAVPIV 706

Query: 646 LTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKE 705
           L RL+ K ++W R + ++NKVW E+ ++N++KSLDH+   FK  D K+L  K+L A I+ 
Sbjct: 707 LNRLRAKDDDWRRAQREWNKVWREVDARNFYKSLDHQGVTFKATDKKALTTKSLVAAIEA 766

Query: 706 ISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLIKY---SCGEMCTTEQL 762
             +++  E   ++  +    R     L +E +D  + +D   LI       G   T  + 
Sbjct: 767 ARDEQVSERAAMMDPSLARTRP-AHQLAYELTDLAVMKDTTSLILAYLERLGAHYTAAER 825

Query: 763 DKVMKIWTTFLEPMLGVPSRPQGAEDTEDVVKAKSHTVKSRAA 805
           DK+ +   +F+     +       ED E+ VK  +    + +A
Sbjct: 826 DKIERWLVSFVVTFFVL-----DKEDFENAVKGAATNAPTSSA 863



 Score = 93.6 bits (231), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 44/72 (61%), Positives = 49/72 (68%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
           L   DAL YL AVK  F D+ + Y+ FL++MKDFK Q IDT GVI RV  LF  H DLI 
Sbjct: 119 LNVTDALGYLDAVKQRFHDRPDVYNRFLDIMKDFKTQIIDTPGVIERVSHLFFAHPDLIH 178

Query: 103 GFNTFLPKGYEI 114
           GFNTFLP GY I
Sbjct: 179 GFNTFLPVGYRI 190



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 51/152 (33%), Positives = 77/152 (50%), Gaps = 24/152 (15%)

Query: 122 QPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQ 181
           +PP     EF++AI +V+KIKTRF  D   YK+FL++L  + ++ K+I EV +++  L Q
Sbjct: 288 EPPSDPQFEFQKAIAYVSKIKTRFNNDPDTYKAFLELLQKH-QDVKNI-EVQEQISVLLQ 345

Query: 182 DHPDLLEEFTH-FLPDSSGAASIHYVPSGRNSIL-------------RDRSSAM---PTA 224
             PDL  EF   F+   SG+    ++ S  NS L             +D SS M   P  
Sbjct: 346 GAPDLQAEFRESFVDGRSGS----FLGSAANSALGSNPHDWMNPNKRKDPSSGMAVPPAK 401

Query: 225 RQVHVDKKERAMASHADRDLSVDRPDPDHDRV 256
           R+  V +KE   +S     +   +P P H R+
Sbjct: 402 RKKKVQEKEPLPSSKPPSSVRPKKPKP-HPRI 432



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 40/157 (25%), Positives = 68/157 (43%), Gaps = 26/157 (16%)

Query: 117 PLEDEQPPP----------------KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILN 160
           PL D QP P                ++P+   +A+ +++ +K RF     VY  FLDI+ 
Sbjct: 91  PLMDAQPGPASSRARSPQQDDGYQSERPLNVTDALGYLDAVKQRFHDRPDVYNRFLDIMK 150

Query: 161 MYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLP------DSSGAASIHYVPSGRNSIL 214
            ++ +      V + V  LF  HPDL+  F  FLP        SG + +   PSG  S+ 
Sbjct: 151 DFKTQIIDTPGVIERVSHLFFAHPDLIHGFNTFLPVGYRIDAGSGGSILVTTPSGVTSL- 209

Query: 215 RDRSSAMPTARQVHVDKKERAMASHADRDLSVDRPDP 251
              +  +P + +     + R+ + H     +++ P P
Sbjct: 210 --NAGQLPPSTEFPGVSRPRS-SQHGHHPTALNAPPP 243


>gi|224055861|ref|XP_002298690.1| predicted protein [Populus trichocarpa]
 gi|222845948|gb|EEE83495.1| predicted protein [Populus trichocarpa]
          Length = 515

 Score =  149 bits (375), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 154/583 (26%), Positives = 248/583 (42%), Gaps = 114/583 (19%)

Query: 131 FEEAINFVNKIKTRFQGDDHVYKSFL----DILNMY-----RKENKSITEVYQEVEALFQ 181
           + E+  ++ +++ RFQ       SF     D++ +      R EN S  +V   V+ + +
Sbjct: 8   YGESKTYIKELRARFQDQPEKLSSFYRVMKDVMALTDELSGRIENVS-DDVLARVKEILE 66

Query: 182 DHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDR-----------------SSAMPTA 224
            H DL+  F  FLP           PS R S+  D                  S+     
Sbjct: 67  GHCDLIHGFNLFLP-----------PSRRFSLDDDEDETVEVEDKDKEEAAAVSAEKTML 115

Query: 225 RQVHVDKKERAMASHADRDLSV-----DRPDPDHDRVLLKSDKDQRRRGEKERERRDDHR 279
            Q  +DK+     +  D D+ V     DR D     V L  D      G     R  +  
Sbjct: 116 LQNFIDKQRMRGGNVWDDDVKVLRQLKDRRDLYKVIVPLCGDDTDLLEGFYRFVRASETT 175

Query: 280 RERERDDRDFENDVN--RDFSMQRFPHKRKSARKIEDSTAEPLHQGGEGDENFGMHPVSS 337
               RD    + DVN  R+ ++Q    +++   KI+         G E DE   +   + 
Sbjct: 176 SGASRDPNSQDKDVNNGREVTLQTGEQQQEQPEKID-------QVGVEKDEERNIVKKAG 228

Query: 338 SYD----DKNAMKSMFSQELSFCEKVKDKL--RDDYQEFLRCLHLYTKEIITRSELQSLV 391
            Y     D+  +K +    L   EKV+ +L   + Y +FL+ +  YT  +I + E +  +
Sbjct: 229 RYAEKAYDRVVIKKLRQDGLCLFEKVRKRLSCENSYYKFLKSIFYYTNRMIQKDEWKERI 288

Query: 392 GDLLGRYPDLMDGFNGFLARCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRER 451
             ++G++PDLMD F  ++   E                       +V V    R +D E 
Sbjct: 289 AAVIGKHPDLMDEFQRYVTDSE-----------------------NVHVS---RKKDEEE 322

Query: 452 DDGVKDRDREAREKDRLDKSVAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPS 511
           D+G K   R  +++D+                       KYL K  +ELDLS C+RCTPS
Sbjct: 323 DEGQKIETRGCKQRDK--------------------KNGKYLYKSNRELDLSQCKRCTPS 362

Query: 512 YRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRF 571
           Y  LPK+Y  P    R +   + LND  + V  G+ED+  +++ +N  EE LF+CED+R 
Sbjct: 363 YLYLPKDYRDPPKHNRMQPELQELNDQLLLVPPGTEDFFSRNIDEN--EEILFQCEDNRH 420

Query: 572 ELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFTALNLRCIERLYGDHGLDVM 631
           E+DML+   +   +  +EL + I ++  K             + LRC+ERLY D GLD++
Sbjct: 421 EMDMLIGWFSSAVEYADELEKGIPHDKFKKGN--------RNIFLRCLERLYDDQGLDLL 472

Query: 632 DVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKN 674
               ++    LPV+  RL+QK +E      +  + W  +Y++N
Sbjct: 473 HKFNEDPQRTLPVLKVRLEQKLKELKDYHDELRENWRNVYARN 515



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 91/195 (46%), Gaps = 23/195 (11%)

Query: 50  AYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAG--------VIARVKELFKGHRDLI 101
            Y+K ++  FQD+ EK   F  VMKD  A   + +G        V+ARVKE+ +GH DLI
Sbjct: 13  TYIKELRARFQDQPEKLSSFYRVMKDVMALTDELSGRIENVSDDVLARVKEILEGHCDLI 72

Query: 102 LGFNTFLPKGYEI--------TLPLEDEQPPPKKPVEFEEAINFVNKI-KTRFQGDDHVY 152
            GFN FLP             T+ +ED+       V  E+ +   N I K R +G  +V+
Sbjct: 73  HGFNLFLPPSRRFSLDDDEDETVEVEDKDKEEAAAVSAEKTMLLQNFIDKQRMRG-GNVW 131

Query: 153 KSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNS 212
              + +L    ++ K   ++Y+ +  L  D  DLLE F  F+  S   +     P+ ++ 
Sbjct: 132 DDDVKVL----RQLKDRRDLYKVIVPLCGDDTDLLEGFYRFVRASETTSGASRDPNSQDK 187

Query: 213 ILRD-RSSAMPTARQ 226
            + + R   + T  Q
Sbjct: 188 DVNNGREVTLQTGEQ 202


>gi|393219969|gb|EJD05455.1| hypothetical protein FOMMEDRAFT_118525 [Fomitiporia mediterranea
           MF3/22]
          Length = 1180

 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 90/250 (36%), Positives = 137/250 (54%), Gaps = 11/250 (4%)

Query: 507 RCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMRKNQYEESLFR 565
           RC PSYR LP +      S R E+   VLND WV+  T  SED  F   +KN YEE+L R
Sbjct: 459 RCGPSYRRLPPSEANVPCSGRDEMCKSVLNDEWVTHPTWASEDSGFYTHKKNAYEEALHR 518

Query: 566 CEDDRFELDMLLESVNVTTKRVEELLEKI------NNNTIKTDGPIRVEDHFTALNLRCI 619
            E++R E D  +E+++ T   +E    KI         T K   P+   +   A++ R I
Sbjct: 519 SEEERHEYDFHIEAISRTIATLEPFHLKIMQLSPEERATSKQKMPLSGVNK--AIHQRII 576

Query: 620 ERLYG-DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKS 678
           +++YG + GL+V+  +  + ++A+P++  RLKQK+EEW + + ++NKVW EI S+NY KS
Sbjct: 577 KKIYGREAGLEVIQAMHDSPAIAIPIVFARLKQKEEEWKKAQREWNKVWREIDSRNYQKS 636

Query: 679 LDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSD 738
           LDH+   FK  D K++ AK    +I+   E++      L+       R    H+ F   D
Sbjct: 637 LDHQGIIFKASDKKAITAKTFLNQIESAREEQMSRRASLIDPLFARTRPRY-HMAFVIED 695

Query: 739 PDIHEDLYQL 748
            D+  DL++L
Sbjct: 696 TDVLSDLFKL 705



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 117/388 (30%), Positives = 163/388 (42%), Gaps = 89/388 (22%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
           L   DAL YL +VK  F D    Y+ FL++MKDFK Q IDT GVI RV  LF G+  LI 
Sbjct: 52  LNVGDALFYLDSVKKQFADSPGVYNKFLDIMKDFKNQSIDTPGVIQRVSTLFAGYPQLIE 111

Query: 103 GFNTFLPKGYEI----------------------------------------TLPLEDEQ 122
           GFNTFLP GY I                                         LP   EQ
Sbjct: 112 GFNTFLPAGYRIECTFDGNDTNVITVTTPGGTTTQSQSADAGSASASAVVGDNLPYTHEQ 171

Query: 123 PPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQD 182
             P        A+ +V KIK RF G + +Y+ F+DILN Y++      ++ Q +  LFQ+
Sbjct: 172 IFP--------AMEYVTKIKQRFAGREELYQEFIDILNSYKRSPVDQDQLAQRIADLFQN 223

Query: 183 HPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQVHVDKKERAMASHADR 242
            PDLL    +F+P                   R+  +A+  A  V  D K       A  
Sbjct: 224 SPDLLSGLQNFVP-------------------REMFNAL-DAMSVEKDVKTAKQVKKA-- 261

Query: 243 DLSVDRPDPDHDRVLLKSDKDQRRRGEKERERRDDHRRERERDDRDFENDVNRDFSMQRF 302
                   P     L  +    ++R  K   R  +  +ERER D+DF  DV+   +  R 
Sbjct: 262 --------PGDSSSLASTAPSTQKRKRKVPVRDKEKEKERER-DQDF--DVSSRAAQSRT 310

Query: 303 PHKRKSAR----KIEDSTAEPLHQGGEGDENFGMHPVSSSYDDKNA--MKSMFSQELSFC 356
              +         + D T    H   E        P  S+YD++    M +    E+ F 
Sbjct: 311 KRTKYPLTGGQDGLYDETPHSPHHIHERPAPPQPRPGPSTYDEQPVPIMAAPSQNEMHFF 370

Query: 357 EKVKDKL--RDDYQEFLRCLHLYTKEII 382
           ++V+  +  RD Y EFL+ ++L+T+EII
Sbjct: 371 DRVRIAIDNRDVYNEFLKLINLFTQEII 398



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 43/79 (54%)

Query: 117 PLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEV 176
           PL++     ++P+   +A+ +++ +K +F     VY  FLDI+  ++ ++     V Q V
Sbjct: 40  PLQETSTISERPLNVGDALFYLDSVKKQFADSPGVYNKFLDIMKDFKNQSIDTPGVIQRV 99

Query: 177 EALFQDHPDLLEEFTHFLP 195
             LF  +P L+E F  FLP
Sbjct: 100 STLFAGYPQLIEGFNTFLP 118


>gi|19112225|ref|NP_595433.1| SIN3 family co-repressor Pst3 [Schizosaccharomyces pombe 972h-]
 gi|74676102|sp|O74755.1|PST3_SCHPO RecName: Full=Paired amphipathic helix protein pst3; AltName:
           Full=SIN3 homolog 3
 gi|3738174|emb|CAA21310.1| SIN3 family co-repressor Pst3 [Schizosaccharomyces pombe]
          Length = 1154

 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 97/277 (35%), Positives = 131/277 (47%), Gaps = 57/277 (20%)

Query: 26  SGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAG 85
           S  +Q   G      + L  NDAL+YL+ VK  F ++RE Y+ FLE+M+DFK+Q +DT G
Sbjct: 96  SISSQNAEGLSSSSNRPLDVNDALSYLELVKYYFSERREIYNRFLEIMRDFKSQALDTLG 155

Query: 86  VIARVKELFKGHRDLILGFNTFLPKGYEI----------------------------TLP 117
           VI RV ELF G+  LI GFNTFLP GY+I                            TLP
Sbjct: 156 VINRVSELFNGYPQLIEGFNTFLPSGYKIEVQLDSSNTSVVRVGTPMHPLPQQGVQSTLP 215

Query: 118 L---------------EDEQPPPKKP------------VEFEEAINFVNKIKTRFQGDDH 150
           +                D QP P  P            V+F  AI ++NK+K R+  +  
Sbjct: 216 VAPSNEDQRTMESTSPTDSQPQPSAPNLVSSTENEKPRVDFNYAIAYMNKVKARYPPNSD 275

Query: 151 VYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLPDS--SGAASIHYVPS 208
            Y  FL +L  Y+K  KSI EV   V  +F+D PDLLEEF  FLPD+  S   S   V  
Sbjct: 276 TYMEFLGVLRTYQKAQKSIFEVRARVAEIFKDSPDLLEEFKLFLPDNVDSTEPSTPNVQK 335

Query: 209 GRNSILRDRSSAMPTARQVHVDKKERAMASHADRDLS 245
             N +    + ++P +  V   +   A ++   R +S
Sbjct: 336 SPNRLPPVGNFSLPPSAPVREKRNRPAHSAQISRSIS 372



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 99/206 (48%), Gaps = 3/206 (1%)

Query: 511 SYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDR 570
           +YR LP ++     S R +L   VLND ++SV             +NQY ++L   ED+R
Sbjct: 499 TYRKLPDSWKQDKCSGRDDLDNSVLNDDYISVAPKPSHVKNIMHHENQYLQALQLVEDER 558

Query: 571 FELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFTALNLRCIERLYG-DHGLD 629
           ++ D +L +     K +    E   +  ++T   ++  +    +    +  +YG +H   
Sbjct: 559 YDYDRVLNTTESAIKILANFCEPTIHEHLET--ALQELERSKRIIKNALIIVYGKEHANL 616

Query: 630 VMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQ 689
            +D L K    A PV+L R+K K +EW R + +++K+W +I  KN   + D R    + +
Sbjct: 617 ALDTLFKKLPTAAPVLLKRIKTKDQEWRRSKREWSKIWRQIEKKNAQAAFDDRYCRIEGR 676

Query: 690 DSKSLGAKALSAEIKEISEKKRKEDD 715
           D + L    +  +I +I ++++   D
Sbjct: 677 DRRGLSYSRILRDIDDIYQRQKHRID 702


>gi|63054759|ref|NP_596012.2| Clr6 histone deacetylase complex subunit Pst1 [Schizosaccharomyces
           pombe 972h-]
 gi|1175429|sp|Q09750.1|PST1_SCHPO RecName: Full=Paired amphipathic helix protein pst1; AltName:
           Full=SIN3 homolog 1
 gi|9624449|gb|AAF90180.1|AF280407_1 corepressor Pst1p [Schizosaccharomyces pombe]
 gi|157310430|emb|CAA20757.2| Clr6 histone deacetylase complex subunit Pst1 [Schizosaccharomyces
           pombe]
          Length = 1522

 Score =  147 bits (372), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 95/299 (31%), Positives = 158/299 (52%), Gaps = 27/299 (9%)

Query: 496 PIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSV-TSGSEDYSFKHM 554
           P   +DL+ C+ C PSYRLLPK  L+   S R +L   +LND WVS  T  SED  F   
Sbjct: 584 PRPRVDLTQCKSCGPSYRLLPKIELLLPCSGRDDLCWTILNDAWVSFPTLASEDSGFIAH 643

Query: 555 RKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDG--------PIR 606
           RKNQ+EE+L + E++R+E D  + +      R  ELL+   +  +K           P  
Sbjct: 644 RKNQFEENLHKLEEERYEYDRHIGA----NMRFIELLQIHADKMLKMSEVEKANWTLPSN 699

Query: 607 VEDHFTALNLRCIERLYG-DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNK 665
           +     ++  + I+++YG +H   +++ L+KN S+ +P++L RLK+K  EW   ++ +N+
Sbjct: 700 LGGKSVSIYHKVIKKVYGKEHAQQIIENLQKNPSVTIPIVLERLKKKDREWRSLQNHWNE 759

Query: 666 VWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNR 725
           +W +I  KN+++SLDH+   FK  D KS   K L +E++ ++++++ E      ++ G  
Sbjct: 760 LWHDIEEKNFYRSLDHQGVSFKSVDKKSTTPKFLISELRNLAQQQKVE------LSEGK- 812

Query: 726 RSIVP--HLEFEYSDPDIHEDLYQLIKYSC--GEMCTTEQLDKVMKIWTTFLEPMLGVP 780
             + P     F Y DP+I  D+ +L       G   + E  +K+     +FL     VP
Sbjct: 813 --VTPSHQFLFSYKDPNIITDIARLFGVFLIHGSTHSAEDNEKMSNFLRSFLSLFFDVP 869



 Score = 86.3 bits (212), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 39/76 (51%), Positives = 54/76 (71%)

Query: 41  QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDL 100
           ++L   DAL+YL  VK  F  + E Y++FL++MK+FK+Q I+T  VI RV +LF G+ +L
Sbjct: 178 RQLNVTDALSYLDLVKLQFHQEPEIYNEFLDIMKEFKSQAIETPEVITRVSKLFAGYPNL 237

Query: 101 ILGFNTFLPKGYEITL 116
           I GFNTFLP GY I +
Sbjct: 238 IQGFNTFLPPGYSIEI 253



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 77/287 (26%), Positives = 116/287 (40%), Gaps = 72/287 (25%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           K+  + ++AINFVN +K RF      Y SFLDIL  Y+ + + I  VY +V  LF + PD
Sbjct: 344 KQAADLDQAINFVNNVKNRFSHKPEAYNSFLDILKSYQHDQRPIQLVYFQVSQLFAEAPD 403

Query: 186 LLEEFTHFLPDSSGAASIH------YVPSGRNSILRDRS-SAMPTARQVHVDKKERAMAS 238
           LLEEF  FLPD S  A          VP    +    RS SA PT+    + K      +
Sbjct: 404 LLEEFKRFLPDVSVNAPAETQDKSTVVPQESATATPKRSPSATPTSALPPIGKFAPPTTA 463

Query: 239 HADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERRDDHRRERERDDRDFENDVNRDFS 298
            A       +P P            ++RRGE   + R+  +R                  
Sbjct: 464 KA-------QPAP------------EKRRGEPAVQTRNHSKR------------------ 486

Query: 299 MQRFPHKRKSARKIEDSTAEPLHQGGEGDENFGMHPVSSSYDDKNAMKSMFSQELSFCEK 358
                  R +   +E++T    +            P++    +KN        EL F E 
Sbjct: 487 ------TRTATSSVEETTPRAFNV-----------PIA---QNKNP------SELEFLEH 520

Query: 359 VKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMD 403
            +  L ++  Y EF++ L LY++E+  ++ L        G    LM+
Sbjct: 521 ARQYLANESKYNEFIKLLELYSQEVFDKNALVERCYVFFGSNEHLMN 567



 Score = 48.5 bits (114), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 19/63 (30%), Positives = 37/63 (58%)

Query: 133 EAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTH 192
           +A+++++ +K +F  +  +Y  FLDI+  ++ +     EV   V  LF  +P+L++ F  
Sbjct: 184 DALSYLDLVKLQFHQEPEIYNEFLDIMKEFKSQAIETPEVITRVSKLFAGYPNLIQGFNT 243

Query: 193 FLP 195
           FLP
Sbjct: 244 FLP 246



 Score = 40.8 bits (94), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 20/62 (32%), Positives = 34/62 (54%)

Query: 48  ALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTF 107
           A+ ++  VK+ F  K E Y+ FL+++K ++  +     V  +V +LF    DL+  F  F
Sbjct: 352 AINFVNNVKNRFSHKPEAYNSFLDILKSYQHDQRPIQLVYFQVSQLFAEAPDLLEEFKRF 411

Query: 108 LP 109
           LP
Sbjct: 412 LP 413


>gi|342881996|gb|EGU82763.1| hypothetical protein FOXB_06714 [Fusarium oxysporum Fo5176]
          Length = 1522

 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 102/305 (33%), Positives = 158/305 (51%), Gaps = 28/305 (9%)

Query: 490  DKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSED 548
            D   A P +++ LSNC    PSYRLLPK   +   S R EL   VLND W S  T  SED
Sbjct: 749  DNRPAPPTEKVSLSNCRGYGPSYRLLPKRERLKPCSGRDELCNSVLNDEWASHPTWASED 808

Query: 549  YSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDG----- 603
              F   RKNQ+EE L R E++R + D  +E+ N+   +  +LLE I  N +         
Sbjct: 809  SGFVAHRKNQFEEGLHRIEEERHDYDFNIEA-NI---KCIQLLEPIAQNMLAMSAAERET 864

Query: 604  ---PIRVEDHFTALNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCR 660
               P+ +    T++  R  +++YGD G+DV++ +  +    +PV+L R+KQK EEW   +
Sbjct: 865  FQMPVALAGQSTSIFKRICKKIYGDRGIDVVNDMFTHPFDVVPVLLARMKQKDEEWRFSQ 924

Query: 661  SDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAI 720
             ++ KVW       + KSLDH     KQ D + L AK L   IK   E++R+E  +    
Sbjct: 925  REWEKVWHAQTENMHLKSLDHMGILVKQNDKRHLTAKHLVDVIKTKHEEQRRERSL---- 980

Query: 721  AAGNRRSIVPHLEF--EYSDPDIHEDLYQLIK-YSC--GEMCTTEQLDKVMKIWTTFLEP 775
                 +  VP  +F  ++SD D   DL +L+  YS   G+  + E+ +++++ + +F+  
Sbjct: 981  -----KGDVPRHQFSWDFSDKDTIIDLLRLMMLYSLHNGQHSSQEK-ERILEFFESFIPA 1034

Query: 776  MLGVP 780
               +P
Sbjct: 1035 FFDIP 1039



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 43/72 (59%), Positives = 51/72 (70%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
            +  DAL YL  VK  F D+ + Y+ FL++MKDFK+Q IDT GVI RV ELF GH +LI 
Sbjct: 274 FSFQDALTYLDQVKVQFHDQPDVYNRFLDIMKDFKSQAIDTPGVINRVSELFAGHPNLIQ 333

Query: 103 GFNTFLPKGYEI 114
           GFNTFLP GY I
Sbjct: 334 GFNTFLPPGYRI 345



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 41/76 (53%), Positives = 53/76 (69%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           + PVEF  AI++VNKIK RFQ    +YK FL+IL  Y++E K I +VY +V  LF   PD
Sbjct: 485 RGPVEFNHAISYVNKIKNRFQDKPEIYKQFLEILQTYQREQKPIQDVYAQVTTLFNSAPD 544

Query: 186 LLEEFTHFLPDSSGAA 201
           LLE+F  FLP+S+G A
Sbjct: 545 LLEDFKQFLPESAGQA 560



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 4/90 (4%)

Query: 25  PSGQTQVVGGGGGGGAQK----LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQR 80
           PSGQ  V G        +    +  N A++Y+  +K+ FQDK E Y  FLE+++ ++ ++
Sbjct: 466 PSGQAGVNGNAANQANMERRGPVEFNHAISYVNKIKNRFQDKPEIYKQFLEILQTYQREQ 525

Query: 81  IDTAGVIARVKELFKGHRDLILGFNTFLPK 110
                V A+V  LF    DL+  F  FLP+
Sbjct: 526 KPIQDVYAQVTTLFNSAPDLLEDFKQFLPE 555



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 37/65 (56%)

Query: 131 FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEF 190
           F++A+ +++++K +F     VY  FLDI+  ++ +      V   V  LF  HP+L++ F
Sbjct: 276 FQDALTYLDQVKVQFHDQPDVYNRFLDIMKDFKSQAIDTPGVINRVSELFAGHPNLIQGF 335

Query: 191 THFLP 195
             FLP
Sbjct: 336 NTFLP 340


>gi|50286735|ref|XP_445797.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49525103|emb|CAG58716.1| unnamed protein product [Candida glabrata]
          Length = 1493

 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 97/272 (35%), Positives = 141/272 (51%), Gaps = 15/272 (5%)

Query: 486 YSSKDKYLAKPIQE---LDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS- 541
           Y  K K +   + E   LDL  CE   PSY+ LPK       S R ++  EVLND WV  
Sbjct: 684 YQDKPKRIENIVHEKHKLDLDLCEAYGPSYKKLPKTDTFMPCSGRDDMCWEVLNDEWVGH 743

Query: 542 VTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKT 601
               SED  F   RKNQYEE+LF+ E++R E D  +ES   T + +E +  KI N T   
Sbjct: 744 PVWASEDSGFIAHRKNQYEETLFKIEEERHEYDYYIESNLRTIQTLETIANKIANMTDAE 803

Query: 602 DGPIRVEDHF--TALNL--RCIERLY-GDHGLDVMDVLRKNASLALPVILTRLKQKQEEW 656
               R+      T++ +  + I ++Y  + G +++D L    ++++P+IL RLKQK EEW
Sbjct: 804 KAQFRLPPGLGHTSMTIYKKVIRKVYDKERGFEIIDALHNYPAISVPIILRRLKQKDEEW 863

Query: 657 ARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDV 716
            R + ++NK+W ++  K Y KSLDH    FKQ D K L  K L +EI  I   +  +   
Sbjct: 864 RRAQREWNKIWRDLEQKVYFKSLDHLGLTFKQADKKLLTTKQLISEINGIKVDQNSKRIH 923

Query: 717 LLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQL 748
            L     N+      L++++ D DI  D+  L
Sbjct: 924 WLTPKPKNQ------LDYDFPDYDILFDIIAL 949



 Score = 92.8 bits (229), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 45/79 (56%), Positives = 56/79 (70%), Gaps = 2/79 (2%)

Query: 126 KKP--VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDH 183
           KKP  VEF +AI +VNKIKTRF     +YK FL+IL  Y++E K I EVY +V  LFQ+ 
Sbjct: 332 KKPADVEFSQAITYVNKIKTRFADQPDIYKQFLEILQTYQREQKPIHEVYAQVTILFQNA 391

Query: 184 PDLLEEFTHFLPDSSGAAS 202
           PDLL++F  FLPDSS + S
Sbjct: 392 PDLLDDFKKFLPDSSASGS 410



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 49/103 (47%), Positives = 64/103 (62%), Gaps = 8/103 (7%)

Query: 12  SQIKRPMISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLE 71
           S  + P++S       QTQ    G     + L   DAL+YL+ VK  F  + + Y+ FL+
Sbjct: 165 STTQSPLVSG----PAQTQ----GDPMSYRPLNVKDALSYLEQVKFQFHTRPDIYNLFLD 216

Query: 72  VMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEI 114
           +MKDFK+Q IDT GVI RV  LFKG+ +LI GFNTFLP+GY I
Sbjct: 217 IMKDFKSQTIDTPGVIERVSSLFKGYPNLIQGFNTFLPQGYRI 259



 Score = 50.1 bits (118), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 20/73 (27%), Positives = 43/73 (58%)

Query: 123 PPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQD 182
           P   +P+  ++A++++ ++K +F     +Y  FLDI+  ++ +      V + V +LF+ 
Sbjct: 182 PMSYRPLNVKDALSYLEQVKFQFHTRPDIYNLFLDIMKDFKSQTIDTPGVIERVSSLFKG 241

Query: 183 HPDLLEEFTHFLP 195
           +P+L++ F  FLP
Sbjct: 242 YPNLIQGFNTFLP 254



 Score = 43.5 bits (101), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 3/79 (3%)

Query: 34  GGGGGGAQK---LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARV 90
           G   G A+K   +  + A+ Y+  +K  F D+ + Y  FLE+++ ++ ++     V A+V
Sbjct: 325 GQNFGSAKKPADVEFSQAITYVNKIKTRFADQPDIYKQFLEILQTYQREQKPIHEVYAQV 384

Query: 91  KELFKGHRDLILGFNTFLP 109
             LF+   DL+  F  FLP
Sbjct: 385 TILFQNAPDLLDDFKKFLP 403



 Score = 43.5 bits (101), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 43/98 (43%), Gaps = 11/98 (11%)

Query: 315 STAEPLHQGGEGDENFGMHPVSSSYDDKNAMKSMFSQELSFCEKVKDKLRDD---YQEFL 371
           S A P+    +  +NFG          K      FSQ +++  K+K +  D    Y++FL
Sbjct: 313 SQATPIPTQHDVGQNFG--------SAKKPADVEFSQAITYVNKIKTRFADQPDIYKQFL 364

Query: 372 RCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFL 409
             L  Y +E     E+ + V  L    PDL+D F  FL
Sbjct: 365 EILQTYQREQKPIHEVYAQVTILFQNAPDLLDDFKKFL 402


>gi|357516613|ref|XP_003628595.1| Paired amphipathic helix protein Sin3 [Medicago truncatula]
 gi|355522617|gb|AET03071.1| Paired amphipathic helix protein Sin3 [Medicago truncatula]
          Length = 203

 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 84/196 (42%), Positives = 106/196 (54%), Gaps = 39/196 (19%)

Query: 39  GAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHR 98
           G +KLT +DA AYLKAVKD+F+DK E Y  FL++MKD+K +RI+   V+  VKELFKGH 
Sbjct: 6   GGKKLTEDDAFAYLKAVKDVFRDKMENYSYFLKIMKDYKDERINYHDVVMEVKELFKGHN 65

Query: 99  DLILGFNTFLPKGYEITLPLEDEQPPP--------KKPVEFEEAIN-------------- 136
           DLI GFN F P GY+I +  E EQ  P          P E  E +N              
Sbjct: 66  DLITGFNIFAPSGYQIPISHETEQLDPMILDECEMTIPSEELEPLNAQSPQMMLGGEEDI 125

Query: 137 -----------------FVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEAL 179
                            FV+K+KTR++GD HV+KSFL I+NM     K+  E Y E  AL
Sbjct: 126 TTPLRNEPFGGPEHANEFVSKVKTRYEGDRHVFKSFLYIMNMLTDRKKTYIETYYEAAAL 185

Query: 180 FQDHPDLLEEFTHFLP 195
            + H DL +E   F P
Sbjct: 186 LEGHTDLQDELIMFFP 201


>gi|151945626|gb|EDN63867.1| histone deacetylase complex DNA-binding subunit [Saccharomyces
           cerevisiae YJM789]
 gi|256274000|gb|EEU08916.1| Sin3p [Saccharomyces cerevisiae JAY291]
          Length = 1536

 Score =  146 bits (369), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 98/272 (36%), Positives = 144/272 (52%), Gaps = 15/272 (5%)

Query: 486 YSSKDKYLAKPIQE---LDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS- 541
           Y  K K +   + E   LDL  CE   PSY+ LPK+      S R ++  EVLND WV  
Sbjct: 726 YQEKTKCIENIVHEKHRLDLDLCEAFGPSYKRLPKSDTFMPCSGRDDMCWEVLNDEWVGH 785

Query: 542 VTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKT 601
               SED  F   RKNQYEE+LF+ E++R E D  +ES   T + +E ++ KI N T   
Sbjct: 786 PVWASEDSGFIAHRKNQYEETLFKIEEERHEYDFYIESNLRTIQCLETIVNKIENMTENE 845

Query: 602 DGPIRVEDHF--TALNL--RCIERLY-GDHGLDVMDVLRKNASLALPVILTRLKQKQEEW 656
               ++      T++ +  + I ++Y  + G +++D L ++ ++  PV+L RLKQK EEW
Sbjct: 846 KANFKLPPGLGHTSMTIYKKVIRKVYDKERGFEIIDALHEHPAVTAPVVLKRLKQKDEEW 905

Query: 657 ARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDV 716
            R + ++NKVW E+  K + KSLDH    FKQ D K L  K L   I EIS  K  + + 
Sbjct: 906 RRAQREWNKVWRELEQKVFFKSLDHLGLTFKQADKKLLTTKQL---ISEISSIKVDQTNK 962

Query: 717 LLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQL 748
            +       +S    L+F++ D +I  D+  L
Sbjct: 963 KIHWLTPKPKS---QLDFDFPDKNIFYDILCL 991



 Score = 92.8 bits (229), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 43/74 (58%), Positives = 55/74 (74%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           VEF +AI++VNKIKTRF     +YK FL+IL  Y++E K I EVY +V  LFQ+ PDLLE
Sbjct: 406 VEFSQAISYVNKIKTRFADQPDIYKHFLEILQTYQREQKPINEVYAQVTHLFQNAPDLLE 465

Query: 189 EFTHFLPDSSGAAS 202
           +F  FLPDSS +A+
Sbjct: 466 DFKKFLPDSSASAN 479



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 41/72 (56%), Positives = 52/72 (72%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
           L   DAL+YL+ VK  F  + + Y+ FL++MKDFK+Q IDT GVI RV  LF+G+  LI 
Sbjct: 219 LNVKDALSYLEQVKFQFSSRPDIYNLFLDIMKDFKSQAIDTPGVIERVSTLFRGYPILIQ 278

Query: 103 GFNTFLPKGYEI 114
           GFNTFLP+GY I
Sbjct: 279 GFNTFLPQGYRI 290



 Score = 46.6 bits (109), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 19/69 (27%), Positives = 40/69 (57%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDL 186
           +P+  ++A++++ ++K +F     +Y  FLDI+  ++ +      V + V  LF+ +P L
Sbjct: 217 RPLNVKDALSYLEQVKFQFSSRPDIYNLFLDIMKDFKSQAIDTPGVIERVSTLFRGYPIL 276

Query: 187 LEEFTHFLP 195
           ++ F  FLP
Sbjct: 277 IQGFNTFLP 285



 Score = 44.7 bits (104), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 20/62 (32%), Positives = 36/62 (58%)

Query: 48  ALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTF 107
           A++Y+  +K  F D+ + Y  FLE+++ ++ ++     V A+V  LF+   DL+  F  F
Sbjct: 411 AISYVNKIKTRFADQPDIYKHFLEILQTYQREQKPINEVYAQVTHLFQNAPDLLEDFKKF 470

Query: 108 LP 109
           LP
Sbjct: 471 LP 472



 Score = 42.0 bits (97), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 3/64 (4%)

Query: 349 FSQELSFCEKVKDKLRDD---YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGF 405
           FSQ +S+  K+K +  D    Y+ FL  L  Y +E    +E+ + V  L    PDL++ F
Sbjct: 408 FSQAISYVNKIKTRFADQPDIYKHFLEILQTYQREQKPINEVYAQVTHLFQNAPDLLEDF 467

Query: 406 NGFL 409
             FL
Sbjct: 468 KKFL 471



 Score = 41.2 bits (95), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 5/76 (6%)

Query: 123 PPPKKPVE----FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEA 178
           P P +P+E      E + F  K K R+ G+ H+Y  FL ILN+Y ++   + ++ ++V+ 
Sbjct: 650 PEPTEPIENNISLNEEVTFFEKAK-RYIGNKHLYTEFLKILNLYSQDILDLDDLVEKVDF 708

Query: 179 LFQDHPDLLEEFTHFL 194
               + +L   F +F+
Sbjct: 709 YLGSNKELFTWFKNFV 724


>gi|172094|gb|AAA34839.1| SIN3 open reading frame [Saccharomyces cerevisiae]
          Length = 1538

 Score =  146 bits (369), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 98/272 (36%), Positives = 144/272 (52%), Gaps = 15/272 (5%)

Query: 486 YSSKDKYLAKPIQE---LDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS- 541
           Y  K K +   + E   LDL  CE   PSY+ LPK+      S R ++  EVLND WV  
Sbjct: 728 YQEKTKCIENIVHEKHRLDLDLCEAFGPSYKRLPKSDTFMPCSGRDDMCWEVLNDEWVGH 787

Query: 542 VTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKT 601
               SED  F   RKNQYEE+LF+ E++R E D  +ES   T + +E ++ KI N T   
Sbjct: 788 PVWASEDSGFIAHRKNQYEETLFKIEEERHEYDFYIESNLRTIQCLETIVNKIENMTENE 847

Query: 602 DGPIRVEDHF--TALNL--RCIERLY-GDHGLDVMDVLRKNASLALPVILTRLKQKQEEW 656
               ++      T++ +  + I ++Y  + G +++D L ++ ++  PV+L RLKQK EEW
Sbjct: 848 KANFKLPPGLGHTSMTIYKKVIRKVYDKERGFEIIDALHEHPAVTAPVVLKRLKQKDEEW 907

Query: 657 ARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDV 716
            R + ++NKVW E+  K + KSLDH    FKQ D K L  K L   I EIS  K  + + 
Sbjct: 908 RRAQREWNKVWRELEQKVFFKSLDHLGLTFKQADKKLLTTKQL---ISEISSIKVDQTNK 964

Query: 717 LLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQL 748
            +       +S    L+F++ D +I  D+  L
Sbjct: 965 KIHWLTPKPKS---QLDFDFPDKNIFYDILCL 993



 Score = 92.8 bits (229), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 43/74 (58%), Positives = 55/74 (74%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           VEF +AI++VNKIKTRF     +YK FL+IL  Y++E K I EVY +V  LFQ+ PDLLE
Sbjct: 406 VEFSQAISYVNKIKTRFADQPDIYKHFLEILQTYQREQKPINEVYAQVTHLFQNAPDLLE 465

Query: 189 EFTHFLPDSSGAAS 202
           +F  FLPDSS +A+
Sbjct: 466 DFKKFLPDSSASAN 479



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 41/72 (56%), Positives = 52/72 (72%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
           L   DAL+YL+ VK  F  + + Y+ FL++MKDFK+Q IDT GVI RV  LF+G+  LI 
Sbjct: 219 LNVKDALSYLEQVKFQFSSRPDIYNLFLDIMKDFKSQAIDTPGVIERVSTLFRGYPILIQ 278

Query: 103 GFNTFLPKGYEI 114
           GFNTFLP+GY I
Sbjct: 279 GFNTFLPQGYRI 290



 Score = 46.6 bits (109), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 19/69 (27%), Positives = 40/69 (57%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDL 186
           +P+  ++A++++ ++K +F     +Y  FLDI+  ++ +      V + V  LF+ +P L
Sbjct: 217 RPLNVKDALSYLEQVKFQFSSRPDIYNLFLDIMKDFKSQAIDTPGVIERVSTLFRGYPIL 276

Query: 187 LEEFTHFLP 195
           ++ F  FLP
Sbjct: 277 IQGFNTFLP 285



 Score = 44.7 bits (104), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 20/62 (32%), Positives = 36/62 (58%)

Query: 48  ALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTF 107
           A++Y+  +K  F D+ + Y  FLE+++ ++ ++     V A+V  LF+   DL+  F  F
Sbjct: 411 AISYVNKIKTRFADQPDIYKHFLEILQTYQREQKPINEVYAQVTHLFQNAPDLLEDFKKF 470

Query: 108 LP 109
           LP
Sbjct: 471 LP 472



 Score = 42.4 bits (98), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 3/73 (4%)

Query: 340 DDKNAMKSMFSQELSFCEKVKDKLRDD---YQEFLRCLHLYTKEIITRSELQSLVGDLLG 396
           D K  +   FSQ +S+  K+K +  D    Y+ FL  L  Y +E    +E+ + V  L  
Sbjct: 399 DAKKNVDVEFSQAISYVNKIKTRFADQPDIYKHFLEILQTYQREQKPINEVYAQVTHLFQ 458

Query: 397 RYPDLMDGFNGFL 409
             PDL++ F  FL
Sbjct: 459 NAPDLLEDFKKFL 471



 Score = 41.2 bits (95), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 5/76 (6%)

Query: 123 PPPKKPVE----FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEA 178
           P P +P+E      E + F  K K R+ G+ H+Y  FL ILN+Y ++   + ++ ++V+ 
Sbjct: 652 PEPTEPIENNISLNEEVTFFEKAK-RYIGNKHLYTEFLKILNLYSQDILDLDDLVEKVDF 710

Query: 179 LFQDHPDLLEEFTHFL 194
               + +L   F +F+
Sbjct: 711 YLGSNKELFTWFKNFV 726


>gi|6324570|ref|NP_014639.1| Sin3p [Saccharomyces cerevisiae S288c]
 gi|2507475|sp|P22579.2|SIN3_YEAST RecName: Full=Transcriptional regulatory protein SIN3
 gi|1419767|emb|CAA99003.1| SIN3 [Saccharomyces cerevisiae]
 gi|285814886|tpg|DAA10779.1| TPA: Sin3p [Saccharomyces cerevisiae S288c]
          Length = 1536

 Score =  146 bits (369), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 98/272 (36%), Positives = 144/272 (52%), Gaps = 15/272 (5%)

Query: 486 YSSKDKYLAKPIQE---LDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS- 541
           Y  K K +   + E   LDL  CE   PSY+ LPK+      S R ++  EVLND WV  
Sbjct: 726 YQEKTKCIENIVHEKHRLDLDLCEAFGPSYKRLPKSDTFMPCSGRDDMCWEVLNDEWVGH 785

Query: 542 VTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKT 601
               SED  F   RKNQYEE+LF+ E++R E D  +ES   T + +E ++ KI N T   
Sbjct: 786 PVWASEDSGFIAHRKNQYEETLFKIEEERHEYDFYIESNLRTIQCLETIVNKIENMTENE 845

Query: 602 DGPIRVEDHF--TALNL--RCIERLY-GDHGLDVMDVLRKNASLALPVILTRLKQKQEEW 656
               ++      T++ +  + I ++Y  + G +++D L ++ ++  PV+L RLKQK EEW
Sbjct: 846 KANFKLPPGLGHTSMTIYKKVIRKVYDKERGFEIIDALHEHPAVTAPVVLKRLKQKDEEW 905

Query: 657 ARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDV 716
            R + ++NKVW E+  K + KSLDH    FKQ D K L  K L   I EIS  K  + + 
Sbjct: 906 RRAQREWNKVWRELEQKVFFKSLDHLGLTFKQADKKLLTTKQL---ISEISSIKVDQTNK 962

Query: 717 LLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQL 748
            +       +S    L+F++ D +I  D+  L
Sbjct: 963 KIHWLTPKPKS---QLDFDFPDKNIFYDILCL 991



 Score = 92.8 bits (229), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 43/74 (58%), Positives = 55/74 (74%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           VEF +AI++VNKIKTRF     +YK FL+IL  Y++E K I EVY +V  LFQ+ PDLLE
Sbjct: 406 VEFSQAISYVNKIKTRFADQPDIYKHFLEILQTYQREQKPINEVYAQVTHLFQNAPDLLE 465

Query: 189 EFTHFLPDSSGAAS 202
           +F  FLPDSS +A+
Sbjct: 466 DFKKFLPDSSASAN 479



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 41/72 (56%), Positives = 52/72 (72%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
           L   DAL+YL+ VK  F  + + Y+ FL++MKDFK+Q IDT GVI RV  LF+G+  LI 
Sbjct: 219 LNVKDALSYLEQVKFQFSSRPDIYNLFLDIMKDFKSQAIDTPGVIERVSTLFRGYPILIQ 278

Query: 103 GFNTFLPKGYEI 114
           GFNTFLP+GY I
Sbjct: 279 GFNTFLPQGYRI 290



 Score = 46.6 bits (109), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 19/69 (27%), Positives = 40/69 (57%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDL 186
           +P+  ++A++++ ++K +F     +Y  FLDI+  ++ +      V + V  LF+ +P L
Sbjct: 217 RPLNVKDALSYLEQVKFQFSSRPDIYNLFLDIMKDFKSQAIDTPGVIERVSTLFRGYPIL 276

Query: 187 LEEFTHFLP 195
           ++ F  FLP
Sbjct: 277 IQGFNTFLP 285



 Score = 44.7 bits (104), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 20/62 (32%), Positives = 36/62 (58%)

Query: 48  ALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTF 107
           A++Y+  +K  F D+ + Y  FLE+++ ++ ++     V A+V  LF+   DL+  F  F
Sbjct: 411 AISYVNKIKTRFADQPDIYKHFLEILQTYQREQKPINEVYAQVTHLFQNAPDLLEDFKKF 470

Query: 108 LP 109
           LP
Sbjct: 471 LP 472



 Score = 42.4 bits (98), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 3/73 (4%)

Query: 340 DDKNAMKSMFSQELSFCEKVKDKLRDD---YQEFLRCLHLYTKEIITRSELQSLVGDLLG 396
           D K  +   FSQ +S+  K+K +  D    Y+ FL  L  Y +E    +E+ + V  L  
Sbjct: 399 DAKKNVDVEFSQAISYVNKIKTRFADQPDIYKHFLEILQTYQREQKPINEVYAQVTHLFQ 458

Query: 397 RYPDLMDGFNGFL 409
             PDL++ F  FL
Sbjct: 459 NAPDLLEDFKKFL 471



 Score = 41.2 bits (95), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 5/76 (6%)

Query: 123 PPPKKPVE----FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEA 178
           P P +P+E      E + F  K K R+ G+ H+Y  FL ILN+Y ++   + ++ ++V+ 
Sbjct: 650 PEPTEPIENNISLNEEVTFFEKAK-RYIGNKHLYTEFLKILNLYSQDILDLDDLVEKVDF 708

Query: 179 LFQDHPDLLEEFTHFL 194
               + +L   F +F+
Sbjct: 709 YLGSNKELFTWFKNFV 724


>gi|349581162|dbj|GAA26320.1| K7_Sin3p [Saccharomyces cerevisiae Kyokai no. 7]
          Length = 1536

 Score =  146 bits (369), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 98/272 (36%), Positives = 144/272 (52%), Gaps = 15/272 (5%)

Query: 486 YSSKDKYLAKPIQE---LDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS- 541
           Y  K K +   + E   LDL  CE   PSY+ LPK+      S R ++  EVLND WV  
Sbjct: 726 YQEKTKCIENIVHEKHRLDLDLCEAFGPSYKRLPKSDTFMPCSGRDDMCWEVLNDEWVGH 785

Query: 542 VTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKT 601
               SED  F   RKNQYEE+LF+ E++R E D  +ES   T + +E ++ KI N T   
Sbjct: 786 PVWASEDSGFIAHRKNQYEETLFKIEEERHEYDFYIESNLRTIQCLETIVNKIENMTENE 845

Query: 602 DGPIRVEDHF--TALNL--RCIERLY-GDHGLDVMDVLRKNASLALPVILTRLKQKQEEW 656
               ++      T++ +  + I ++Y  + G +++D L ++ ++  PV+L RLKQK EEW
Sbjct: 846 KANFKLPPGLGHTSMTIYKKVIRKVYDKERGFEIIDALHEHPAVTAPVVLKRLKQKDEEW 905

Query: 657 ARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDV 716
            R + ++NKVW E+  K + KSLDH    FKQ D K L  K L   I EIS  K  + + 
Sbjct: 906 RRAQREWNKVWRELEQKVFFKSLDHLGLTFKQADKKLLTTKQL---ISEISSIKVDQTNK 962

Query: 717 LLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQL 748
            +       +S    L+F++ D +I  D+  L
Sbjct: 963 KIHWLTPKPKS---QLDFDFPDKNIFYDILCL 991



 Score = 92.8 bits (229), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 43/74 (58%), Positives = 55/74 (74%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           VEF +AI++VNKIKTRF     +YK FL+IL  Y++E K I EVY +V  LFQ+ PDLLE
Sbjct: 406 VEFSQAISYVNKIKTRFADQPDIYKHFLEILQTYQREQKPINEVYAQVTHLFQNAPDLLE 465

Query: 189 EFTHFLPDSSGAAS 202
           +F  FLPDSS +A+
Sbjct: 466 DFKKFLPDSSASAN 479



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 41/72 (56%), Positives = 52/72 (72%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
           L   DAL+YL+ VK  F  + + Y+ FL++MKDFK+Q IDT GVI RV  LF+G+  LI 
Sbjct: 219 LNVKDALSYLEQVKFQFSSRPDIYNLFLDIMKDFKSQAIDTPGVIERVSTLFRGYPILIQ 278

Query: 103 GFNTFLPKGYEI 114
           GFNTFLP+GY I
Sbjct: 279 GFNTFLPQGYRI 290



 Score = 46.2 bits (108), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 19/69 (27%), Positives = 40/69 (57%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDL 186
           +P+  ++A++++ ++K +F     +Y  FLDI+  ++ +      V + V  LF+ +P L
Sbjct: 217 RPLNVKDALSYLEQVKFQFSSRPDIYNLFLDIMKDFKSQAIDTPGVIERVSTLFRGYPIL 276

Query: 187 LEEFTHFLP 195
           ++ F  FLP
Sbjct: 277 IQGFNTFLP 285



 Score = 44.7 bits (104), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 20/62 (32%), Positives = 36/62 (58%)

Query: 48  ALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTF 107
           A++Y+  +K  F D+ + Y  FLE+++ ++ ++     V A+V  LF+   DL+  F  F
Sbjct: 411 AISYVNKIKTRFADQPDIYKHFLEILQTYQREQKPINEVYAQVTHLFQNAPDLLEDFKKF 470

Query: 108 LP 109
           LP
Sbjct: 471 LP 472



 Score = 42.0 bits (97), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 3/64 (4%)

Query: 349 FSQELSFCEKVKDKLRDD---YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGF 405
           FSQ +S+  K+K +  D    Y+ FL  L  Y +E    +E+ + V  L    PDL++ F
Sbjct: 408 FSQAISYVNKIKTRFADQPDIYKHFLEILQTYQREQKPINEVYAQVTHLFQNAPDLLEDF 467

Query: 406 NGFL 409
             FL
Sbjct: 468 KKFL 471



 Score = 41.2 bits (95), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 5/76 (6%)

Query: 123 PPPKKPVE----FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEA 178
           P P +P+E      E + F  K K R+ G+ H+Y  FL ILN+Y ++   + ++ ++V+ 
Sbjct: 650 PEPTEPIENNISLNEEVTFFEKAK-RYIGNKHLYTEFLKILNLYSQDILDLDDLVEKVDF 708

Query: 179 LFQDHPDLLEEFTHFL 194
               + +L   F +F+
Sbjct: 709 YLGSNKELFTWFKNFV 724


>gi|392296329|gb|EIW07431.1| Sin3p [Saccharomyces cerevisiae CEN.PK113-7D]
          Length = 1536

 Score =  146 bits (369), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 98/272 (36%), Positives = 144/272 (52%), Gaps = 15/272 (5%)

Query: 486 YSSKDKYLAKPIQE---LDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS- 541
           Y  K K +   + E   LDL  CE   PSY+ LPK+      S R ++  EVLND WV  
Sbjct: 726 YQEKTKCIENIVHEKHRLDLDLCEAFGPSYKRLPKSDTFMPCSGRDDMCWEVLNDEWVGH 785

Query: 542 VTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKT 601
               SED  F   RKNQYEE+LF+ E++R E D  +ES   T + +E ++ KI N T   
Sbjct: 786 PVWASEDSGFIAHRKNQYEETLFKIEEERHEYDFYIESNLRTIQCLETIVNKIENMTENE 845

Query: 602 DGPIRVEDHF--TALNL--RCIERLY-GDHGLDVMDVLRKNASLALPVILTRLKQKQEEW 656
               ++      T++ +  + I ++Y  + G +++D L ++ ++  PV+L RLKQK EEW
Sbjct: 846 KANFKLPPGLGHTSMTIYKKVIRKVYDKERGFEIIDALHEHPAVTAPVVLKRLKQKDEEW 905

Query: 657 ARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDV 716
            R + ++NKVW E+  K + KSLDH    FKQ D K L  K L   I EIS  K  + + 
Sbjct: 906 RRAQREWNKVWRELEQKVFFKSLDHLGLTFKQADKKLLTTKQL---ISEISSIKVDQTNK 962

Query: 717 LLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQL 748
            +       +S    L+F++ D +I  D+  L
Sbjct: 963 KIHWLTPKPKS---QLDFDFPDKNIFYDILCL 991



 Score = 92.8 bits (229), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 43/74 (58%), Positives = 55/74 (74%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           VEF +AI++VNKIKTRF     +YK FL+IL  Y++E K I EVY +V  LFQ+ PDLLE
Sbjct: 406 VEFSQAISYVNKIKTRFADQPDIYKHFLEILQTYQREQKPINEVYAQVTHLFQNAPDLLE 465

Query: 189 EFTHFLPDSSGAAS 202
           +F  FLPDSS +A+
Sbjct: 466 DFKKFLPDSSASAN 479



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 41/72 (56%), Positives = 52/72 (72%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
           L   DAL+YL+ VK  F  + + Y+ FL++MKDFK+Q IDT GVI RV  LF+G+  LI 
Sbjct: 219 LNVKDALSYLEQVKFQFSSRPDIYNLFLDIMKDFKSQAIDTPGVIERVSTLFRGYPILIQ 278

Query: 103 GFNTFLPKGYEI 114
           GFNTFLP+GY I
Sbjct: 279 GFNTFLPQGYRI 290



 Score = 46.2 bits (108), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 19/69 (27%), Positives = 40/69 (57%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDL 186
           +P+  ++A++++ ++K +F     +Y  FLDI+  ++ +      V + V  LF+ +P L
Sbjct: 217 RPLNVKDALSYLEQVKFQFSSRPDIYNLFLDIMKDFKSQAIDTPGVIERVSTLFRGYPIL 276

Query: 187 LEEFTHFLP 195
           ++ F  FLP
Sbjct: 277 IQGFNTFLP 285



 Score = 44.7 bits (104), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 20/62 (32%), Positives = 36/62 (58%)

Query: 48  ALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTF 107
           A++Y+  +K  F D+ + Y  FLE+++ ++ ++     V A+V  LF+   DL+  F  F
Sbjct: 411 AISYVNKIKTRFADQPDIYKHFLEILQTYQREQKPINEVYAQVTHLFQNAPDLLEDFKKF 470

Query: 108 LP 109
           LP
Sbjct: 471 LP 472



 Score = 42.0 bits (97), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 3/64 (4%)

Query: 349 FSQELSFCEKVKDKLRDD---YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGF 405
           FSQ +S+  K+K +  D    Y+ FL  L  Y +E    +E+ + V  L    PDL++ F
Sbjct: 408 FSQAISYVNKIKTRFADQPDIYKHFLEILQTYQREQKPINEVYAQVTHLFQNAPDLLEDF 467

Query: 406 NGFL 409
             FL
Sbjct: 468 KKFL 471



 Score = 41.2 bits (95), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 5/76 (6%)

Query: 123 PPPKKPVE----FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEA 178
           P P +P+E      E + F  K K R+ G+ H+Y  FL ILN+Y ++   + ++ ++V+ 
Sbjct: 650 PEPTEPIENNISLNEEVTFFEKAK-RYIGNKHLYTEFLKILNLYSQDILDLDDLVEKVDF 708

Query: 179 LFQDHPDLLEEFTHFL 194
               + +L   F +F+
Sbjct: 709 YLGSNKELFTWFKNFV 724


>gi|259149482|emb|CAY86286.1| Sin3p [Saccharomyces cerevisiae EC1118]
          Length = 1536

 Score =  146 bits (369), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 98/272 (36%), Positives = 144/272 (52%), Gaps = 15/272 (5%)

Query: 486 YSSKDKYLAKPIQE---LDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS- 541
           Y  K K +   + E   LDL  CE   PSY+ LPK+      S R ++  EVLND WV  
Sbjct: 726 YQEKTKCIENIVHEKHRLDLDLCEAFGPSYKRLPKSDTFMPCSGRDDMCWEVLNDEWVGH 785

Query: 542 VTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKT 601
               SED  F   RKNQYEE+LF+ E++R E D  +ES   T + +E ++ KI N T   
Sbjct: 786 PVWASEDSGFIAHRKNQYEETLFKIEEERHEYDFYIESNLRTIQCLETIVNKIENMTENE 845

Query: 602 DGPIRVEDHF--TALNL--RCIERLY-GDHGLDVMDVLRKNASLALPVILTRLKQKQEEW 656
               ++      T++ +  + I ++Y  + G +++D L ++ ++  PV+L RLKQK EEW
Sbjct: 846 KANFKLPPGLGHTSMTIYKKVIRKVYDKERGFEIIDALHEHPAVTAPVVLKRLKQKDEEW 905

Query: 657 ARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDV 716
            R + ++NKVW E+  K + KSLDH    FKQ D K L  K L   I EIS  K  + + 
Sbjct: 906 RRAQREWNKVWRELEQKVFFKSLDHLGLTFKQADKKLLTTKQL---ISEISSIKVDQTNK 962

Query: 717 LLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQL 748
            +       +S    L+F++ D +I  D+  L
Sbjct: 963 KIHWLTPKPKS---QLDFDFPDKNIFYDILCL 991



 Score = 92.8 bits (229), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 43/74 (58%), Positives = 55/74 (74%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           VEF +AI++VNKIKTRF     +YK FL+IL  Y++E K I EVY +V  LFQ+ PDLLE
Sbjct: 406 VEFSQAISYVNKIKTRFADQPDIYKHFLEILQTYQREQKPINEVYAQVTHLFQNAPDLLE 465

Query: 189 EFTHFLPDSSGAAS 202
           +F  FLPDSS +A+
Sbjct: 466 DFKKFLPDSSASAN 479



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 41/72 (56%), Positives = 52/72 (72%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
           L   DAL+YL+ VK  F  + + Y+ FL++MKDFK+Q IDT GVI RV  LF+G+  LI 
Sbjct: 219 LNVKDALSYLEQVKFQFSSRPDIYNLFLDIMKDFKSQAIDTPGVIERVSTLFRGYPILIQ 278

Query: 103 GFNTFLPKGYEI 114
           GFNTFLP+GY I
Sbjct: 279 GFNTFLPQGYRI 290



 Score = 46.2 bits (108), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 19/69 (27%), Positives = 40/69 (57%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDL 186
           +P+  ++A++++ ++K +F     +Y  FLDI+  ++ +      V + V  LF+ +P L
Sbjct: 217 RPLNVKDALSYLEQVKFQFSSRPDIYNLFLDIMKDFKSQAIDTPGVIERVSTLFRGYPIL 276

Query: 187 LEEFTHFLP 195
           ++ F  FLP
Sbjct: 277 IQGFNTFLP 285



 Score = 44.7 bits (104), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 20/62 (32%), Positives = 36/62 (58%)

Query: 48  ALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTF 107
           A++Y+  +K  F D+ + Y  FLE+++ ++ ++     V A+V  LF+   DL+  F  F
Sbjct: 411 AISYVNKIKTRFADQPDIYKHFLEILQTYQREQKPINEVYAQVTHLFQNAPDLLEDFKKF 470

Query: 108 LP 109
           LP
Sbjct: 471 LP 472



 Score = 42.0 bits (97), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 3/64 (4%)

Query: 349 FSQELSFCEKVKDKLRDD---YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGF 405
           FSQ +S+  K+K +  D    Y+ FL  L  Y +E    +E+ + V  L    PDL++ F
Sbjct: 408 FSQAISYVNKIKTRFADQPDIYKHFLEILQTYQREQKPINEVYAQVTHLFQNAPDLLEDF 467

Query: 406 NGFL 409
             FL
Sbjct: 468 KKFL 471



 Score = 41.2 bits (95), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 5/76 (6%)

Query: 123 PPPKKPVE----FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEA 178
           P P +P+E      E + F  K K R+ G+ H+Y  FL ILN+Y ++   + ++ ++V+ 
Sbjct: 650 PEPTEPIENNISLNEEVTFFEKAK-RYIGNKHLYTEFLKILNLYSQDILDLDDLVEKVDF 708

Query: 179 LFQDHPDLLEEFTHFL 194
               + +L   F +F+
Sbjct: 709 YLGSNKELFTWFKNFV 724


>gi|190407338|gb|EDV10605.1| paired amphipathic helix protein SIN3 [Saccharomyces cerevisiae
           RM11-1a]
          Length = 1536

 Score =  146 bits (369), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 98/272 (36%), Positives = 144/272 (52%), Gaps = 15/272 (5%)

Query: 486 YSSKDKYLAKPIQE---LDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS- 541
           Y  K K +   + E   LDL  CE   PSY+ LPK+      S R ++  EVLND WV  
Sbjct: 726 YQEKTKCIENIVHEKHRLDLDLCEAFGPSYKRLPKSDTFMPCSGRDDMCWEVLNDEWVGH 785

Query: 542 VTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKT 601
               SED  F   RKNQYEE+LF+ E++R E D  +ES   T + +E ++ KI N T   
Sbjct: 786 PVWASEDSGFIAHRKNQYEETLFKIEEERHEYDFYIESNLRTIQCLETIVNKIENMTENE 845

Query: 602 DGPIRVEDHF--TALNL--RCIERLY-GDHGLDVMDVLRKNASLALPVILTRLKQKQEEW 656
               ++      T++ +  + I ++Y  + G +++D L ++ ++  PV+L RLKQK EEW
Sbjct: 846 KANFKLPPGLGHTSMTIYKKVIRKVYDKERGFEIIDALHEHPAVTAPVVLKRLKQKDEEW 905

Query: 657 ARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDV 716
            R + ++NKVW E+  K + KSLDH    FKQ D K L  K L   I EIS  K  + + 
Sbjct: 906 RRAQREWNKVWRELEQKVFFKSLDHLGLTFKQADKKLLTTKQL---ISEISSIKVDQTNK 962

Query: 717 LLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQL 748
            +       +S    L+F++ D +I  D+  L
Sbjct: 963 KIHWLTPKPKS---QLDFDFPDKNIFYDILCL 991



 Score = 92.8 bits (229), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 43/74 (58%), Positives = 55/74 (74%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           VEF +AI++VNKIKTRF     +YK FL+IL  Y++E K I EVY +V  LFQ+ PDLLE
Sbjct: 406 VEFSQAISYVNKIKTRFADQPDIYKHFLEILQTYQREQKPINEVYAQVTHLFQNAPDLLE 465

Query: 189 EFTHFLPDSSGAAS 202
           +F  FLPDSS +A+
Sbjct: 466 DFKKFLPDSSASAN 479



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 41/72 (56%), Positives = 52/72 (72%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
           L   DAL+YL+ VK  F  + + Y+ FL++MKDFK+Q IDT GVI RV  LF+G+  LI 
Sbjct: 219 LNVKDALSYLEQVKFQFSSRPDIYNLFLDIMKDFKSQAIDTPGVIERVSTLFRGYPILIQ 278

Query: 103 GFNTFLPKGYEI 114
           GFNTFLP+GY I
Sbjct: 279 GFNTFLPQGYRI 290



 Score = 46.2 bits (108), Expect = 0.086,   Method: Compositional matrix adjust.
 Identities = 19/69 (27%), Positives = 40/69 (57%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDL 186
           +P+  ++A++++ ++K +F     +Y  FLDI+  ++ +      V + V  LF+ +P L
Sbjct: 217 RPLNVKDALSYLEQVKFQFSSRPDIYNLFLDIMKDFKSQAIDTPGVIERVSTLFRGYPIL 276

Query: 187 LEEFTHFLP 195
           ++ F  FLP
Sbjct: 277 IQGFNTFLP 285



 Score = 44.7 bits (104), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 20/62 (32%), Positives = 36/62 (58%)

Query: 48  ALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTF 107
           A++Y+  +K  F D+ + Y  FLE+++ ++ ++     V A+V  LF+   DL+  F  F
Sbjct: 411 AISYVNKIKTRFADQPDIYKHFLEILQTYQREQKPINEVYAQVTHLFQNAPDLLEDFKKF 470

Query: 108 LP 109
           LP
Sbjct: 471 LP 472



 Score = 42.0 bits (97), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 3/64 (4%)

Query: 349 FSQELSFCEKVKDKLRDD---YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGF 405
           FSQ +S+  K+K +  D    Y+ FL  L  Y +E    +E+ + V  L    PDL++ F
Sbjct: 408 FSQAISYVNKIKTRFADQPDIYKHFLEILQTYQREQKPINEVYAQVTHLFQNAPDLLEDF 467

Query: 406 NGFL 409
             FL
Sbjct: 468 KKFL 471



 Score = 41.2 bits (95), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 5/76 (6%)

Query: 123 PPPKKPVE----FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEA 178
           P P +P+E      E + F  K K R+ G+ H+Y  FL ILN+Y ++   + ++ ++V+ 
Sbjct: 650 PEPTEPIENNISLNEEVTFFEKAK-RYIGNKHLYTEFLKILNLYSQDILDLDDLVEKVDF 708

Query: 179 LFQDHPDLLEEFTHFL 194
               + +L   F +F+
Sbjct: 709 YLGSNKELFTWFKNFV 724


>gi|343429525|emb|CBQ73098.1| related to SIN3-transcription regulatory protein [Sporisorium
           reilianum SRZ2]
          Length = 1470

 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 83/229 (36%), Positives = 139/229 (60%), Gaps = 9/229 (3%)

Query: 493 LAKPIQE-LDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYS 550
           +  P++E +DL+NC+    SYR LPK+ +  + S R  +  EVLND WVS  T  SE   
Sbjct: 568 VPAPLRERVDLNNCKVYGASYRKLPKSEVNLACSGRDPMCWEVLNDGWVSHPTWASEGEG 627

Query: 551 FKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDH 610
           F   +KN YE++L+R E++R E D  +E+   T   +E +  +I+    +     R++  
Sbjct: 628 FNPHKKNPYEDALYRSEEERHEYDYHIEANLRTIALLEPIAARISTMDNEEKAAFRLKPG 687

Query: 611 F----TALNLRCIERLYG-DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNK 665
                 ++  R I+++YG + GL+V++ L     +++P++L RLKQK EEW R + ++NK
Sbjct: 688 LGGQSKSIYQRVIKKVYGREQGLEVINALHDTPCISVPIVLHRLKQKDEEWKRAQREWNK 747

Query: 666 VWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEI--KEISEKKRK 712
           VW E+ ++NY+KSLDH+   FK  D K++ AKA  AEI  +++ +++R+
Sbjct: 748 VWREVDARNYYKSLDHQGVNFKASDKKAITAKAFLAEIEARKLQQQQRR 796



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 46/93 (49%), Positives = 59/93 (63%), Gaps = 4/93 (4%)

Query: 117 PLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEV 176
           P+   Q P + PVEF  AIN+VNKIK RF  D   YK FL+IL  Y+KE + I +VY +V
Sbjct: 249 PMTPVQDPKRPPVEFNHAINYVNKIKQRFSQDPDTYKQFLEILQTYQKEQRPIHDVYAQV 308

Query: 177 EALFQDHPDLLEEFTHFLPDSSGAASIHYVPSG 209
             LF++  DLL+EF  FLPD+S  +     PSG
Sbjct: 309 TVLFENAKDLLDEFKQFLPDTSAGSQ----PSG 337



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 43/77 (55%), Positives = 52/77 (67%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
           L   DAL+YL  VK  F +  + Y+ FL++MKDFK+Q IDT GVI RV  LF+GH  LI 
Sbjct: 4   LNVKDALSYLDQVKVQFAEHPDVYNRFLDIMKDFKSQSIDTPGVIERVSTLFRGHPSLIQ 63

Query: 103 GFNTFLPKGYEITLPLE 119
           GFNTFLP GY I   L+
Sbjct: 64  GFNTFLPPGYRIECSLD 80



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 20/67 (29%), Positives = 40/67 (59%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           +  ++A+++++++K +F     VY  FLDI+  ++ ++     V + V  LF+ HP L++
Sbjct: 4   LNVKDALSYLDQVKVQFAEHPDVYNRFLDIMKDFKSQSIDTPGVIERVSTLFRGHPSLIQ 63

Query: 189 EFTHFLP 195
            F  FLP
Sbjct: 64  GFNTFLP 70



 Score = 42.4 bits (98), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 20/64 (31%), Positives = 35/64 (54%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFN 105
           N A+ Y+  +K  F    + Y  FLE+++ ++ ++     V A+V  LF+  +DL+  F 
Sbjct: 264 NHAINYVNKIKQRFSQDPDTYKQFLEILQTYQKEQRPIHDVYAQVTVLFENAKDLLDEFK 323

Query: 106 TFLP 109
            FLP
Sbjct: 324 QFLP 327


>gi|365763241|gb|EHN04771.1| Sin3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
          Length = 1536

 Score =  146 bits (368), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 98/272 (36%), Positives = 144/272 (52%), Gaps = 15/272 (5%)

Query: 486 YSSKDKYLAKPIQE---LDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS- 541
           Y  K K +   + E   LDL  CE   PSY+ LPK+      S R ++  EVLND WV  
Sbjct: 726 YQEKTKCIENIVHEKHRLDLDLCEAFGPSYKRLPKSDTFMPCSGRDDMCWEVLNDEWVGH 785

Query: 542 VTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKT 601
               SED  F   RKNQYEE+LF+ E++R E D  +ES   T + +E ++ KI N T   
Sbjct: 786 PVWASEDSGFIAHRKNQYEETLFKIEEERHEYDFYIESNLRTIQCLETIVNKIENMTENE 845

Query: 602 DGPIRVEDHF--TALNL--RCIERLY-GDHGLDVMDVLRKNASLALPVILTRLKQKQEEW 656
               ++      T++ +  + I ++Y  + G +++D L ++ ++  PV+L RLKQK EEW
Sbjct: 846 KANFKLPPGLGHTSMTIYKKVIRKVYDKERGFEIIDALHEHPAVTAPVVLKRLKQKDEEW 905

Query: 657 ARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDV 716
            R + ++NKVW E+  K + KSLDH    FKQ D K L  K L   I EIS  K  + + 
Sbjct: 906 RRAQREWNKVWRELEQKVFFKSLDHLGLTFKQADKKLLTTKQL---ISEISSIKVDQTNK 962

Query: 717 LLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQL 748
            +       +S    L+F++ D +I  D+  L
Sbjct: 963 KIHWLTPKPKS---QLDFDFPDKNIFYDILCL 991



 Score = 92.8 bits (229), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 43/74 (58%), Positives = 55/74 (74%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           VEF +AI++VNKIKTRF     +YK FL+IL  Y++E K I EVY +V  LFQ+ PDLLE
Sbjct: 406 VEFSQAISYVNKIKTRFADQPDIYKHFLEILQTYQREQKPINEVYAQVTHLFQNAPDLLE 465

Query: 189 EFTHFLPDSSGAAS 202
           +F  FLPDSS +A+
Sbjct: 466 DFKKFLPDSSASAN 479



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 41/72 (56%), Positives = 52/72 (72%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
           L   DAL+YL+ VK  F  + + Y+ FL++MKDFK+Q IDT GVI RV  LF+G+  LI 
Sbjct: 219 LNVKDALSYLEQVKFQFSSRPDIYNLFLDIMKDFKSQAIDTPGVIERVSTLFRGYPILIQ 278

Query: 103 GFNTFLPKGYEI 114
           GFNTFLP+GY I
Sbjct: 279 GFNTFLPQGYRI 290



 Score = 46.2 bits (108), Expect = 0.092,   Method: Compositional matrix adjust.
 Identities = 19/69 (27%), Positives = 40/69 (57%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDL 186
           +P+  ++A++++ ++K +F     +Y  FLDI+  ++ +      V + V  LF+ +P L
Sbjct: 217 RPLNVKDALSYLEQVKFQFSSRPDIYNLFLDIMKDFKSQAIDTPGVIERVSTLFRGYPIL 276

Query: 187 LEEFTHFLP 195
           ++ F  FLP
Sbjct: 277 IQGFNTFLP 285



 Score = 44.7 bits (104), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 20/62 (32%), Positives = 36/62 (58%)

Query: 48  ALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTF 107
           A++Y+  +K  F D+ + Y  FLE+++ ++ ++     V A+V  LF+   DL+  F  F
Sbjct: 411 AISYVNKIKTRFADQPDIYKHFLEILQTYQREQKPINEVYAQVTHLFQNAPDLLEDFKKF 470

Query: 108 LP 109
           LP
Sbjct: 471 LP 472



 Score = 42.0 bits (97), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 3/64 (4%)

Query: 349 FSQELSFCEKVKDKLRDD---YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGF 405
           FSQ +S+  K+K +  D    Y+ FL  L  Y +E    +E+ + V  L    PDL++ F
Sbjct: 408 FSQAISYVNKIKTRFADQPDIYKHFLEILQTYQREQKPINEVYAQVTHLFQNAPDLLEDF 467

Query: 406 NGFL 409
             FL
Sbjct: 468 KKFL 471



 Score = 41.6 bits (96), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 5/76 (6%)

Query: 123 PPPKKPVE----FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEA 178
           P P +P+E      E + F  K K R+ G+ H+Y  FL ILN+Y ++   + ++ ++V+ 
Sbjct: 650 PEPTEPIENNISLNEEVTFFEKAK-RYIGNKHLYTEFLKILNLYSQDILDLBDLVEKVDF 708

Query: 179 LFQDHPDLLEEFTHFL 194
               + +L   F +F+
Sbjct: 709 YLGSNKELFTWFKNFV 724


>gi|323331713|gb|EGA73127.1| Sin3p [Saccharomyces cerevisiae AWRI796]
          Length = 1483

 Score =  146 bits (368), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 98/272 (36%), Positives = 144/272 (52%), Gaps = 15/272 (5%)

Query: 486 YSSKDKYLAKPIQE---LDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS- 541
           Y  K K +   + E   LDL  CE   PSY+ LPK+      S R ++  EVLND WV  
Sbjct: 726 YQEKTKCIENIVHEKHRLDLDLCEAFGPSYKRLPKSDTFMPCSGRDDMCWEVLNDEWVGH 785

Query: 542 VTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKT 601
               SED  F   RKNQYEE+LF+ E++R E D  +ES   T + +E ++ KI N T   
Sbjct: 786 PVWASEDSGFIAHRKNQYEETLFKIEEERHEYDFYIESNLRTIQCLETIVNKIENMTENE 845

Query: 602 DGPIRVEDHF--TALNL--RCIERLY-GDHGLDVMDVLRKNASLALPVILTRLKQKQEEW 656
               ++      T++ +  + I ++Y  + G +++D L ++ ++  PV+L RLKQK EEW
Sbjct: 846 KANFKLPPGLGHTSMTIYKKVIRKVYDKERGFEIIDALHEHPAVTAPVVLKRLKQKDEEW 905

Query: 657 ARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDV 716
            R + ++NKVW E+  K + KSLDH    FKQ D K L  K L   I EIS  K  + + 
Sbjct: 906 RRAQREWNKVWRELEQKVFFKSLDHLGLTFKQADKKLLTTKQL---ISEISSIKVDQTNK 962

Query: 717 LLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQL 748
            +       +S    L+F++ D +I  D+  L
Sbjct: 963 KIHWLTPKPKS---QLDFDFPDKNIFYDILCL 991



 Score = 92.8 bits (229), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 43/74 (58%), Positives = 55/74 (74%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           VEF +AI++VNKIKTRF     +YK FL+IL  Y++E K I EVY +V  LFQ+ PDLLE
Sbjct: 406 VEFSQAISYVNKIKTRFADQPDIYKHFLEILQTYQREQKPINEVYAQVTHLFQNAPDLLE 465

Query: 189 EFTHFLPDSSGAAS 202
           +F  FLPDSS +A+
Sbjct: 466 DFKKFLPDSSASAN 479



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 41/72 (56%), Positives = 52/72 (72%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
           L   DAL+YL+ VK  F  + + Y+ FL++MKDFK+Q IDT GVI RV  LF+G+  LI 
Sbjct: 219 LNVKDALSYLEQVKFQFSSRPDIYNLFLDIMKDFKSQAIDTPGVIERVSTLFRGYPILIQ 278

Query: 103 GFNTFLPKGYEI 114
           GFNTFLP+GY I
Sbjct: 279 GFNTFLPQGYRI 290



 Score = 46.2 bits (108), Expect = 0.096,   Method: Compositional matrix adjust.
 Identities = 19/69 (27%), Positives = 40/69 (57%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDL 186
           +P+  ++A++++ ++K +F     +Y  FLDI+  ++ +      V + V  LF+ +P L
Sbjct: 217 RPLNVKDALSYLEQVKFQFSSRPDIYNLFLDIMKDFKSQAIDTPGVIERVSTLFRGYPIL 276

Query: 187 LEEFTHFLP 195
           ++ F  FLP
Sbjct: 277 IQGFNTFLP 285



 Score = 44.7 bits (104), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 20/62 (32%), Positives = 36/62 (58%)

Query: 48  ALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTF 107
           A++Y+  +K  F D+ + Y  FLE+++ ++ ++     V A+V  LF+   DL+  F  F
Sbjct: 411 AISYVNKIKTRFADQPDIYKHFLEILQTYQREQKPINEVYAQVTHLFQNAPDLLEDFKKF 470

Query: 108 LP 109
           LP
Sbjct: 471 LP 472



 Score = 42.0 bits (97), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 3/64 (4%)

Query: 349 FSQELSFCEKVKDKLRDD---YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGF 405
           FSQ +S+  K+K +  D    Y+ FL  L  Y +E    +E+ + V  L    PDL++ F
Sbjct: 408 FSQAISYVNKIKTRFADQPDIYKHFLEILQTYQREQKPINEVYAQVTHLFQNAPDLLEDF 467

Query: 406 NGFL 409
             FL
Sbjct: 468 KKFL 471



 Score = 40.8 bits (94), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 5/76 (6%)

Query: 123 PPPKKPVE----FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEA 178
           P P +P+E      E + F  K K R+ G+ H+Y  FL ILN+Y ++   + ++ ++V+ 
Sbjct: 650 PEPTEPIENNISLNEEVTFFEKAK-RYIGNKHLYTEFLKILNLYSQDILDLDDLVEKVDF 708

Query: 179 LFQDHPDLLEEFTHFL 194
               + +L   F +F+
Sbjct: 709 YLGSNKELFTWFKNFV 724


>gi|392558467|gb|EIW51655.1| hypothetical protein TRAVEDRAFT_75682 [Trametes versicolor
           FP-101664 SS1]
          Length = 1490

 Score =  145 bits (367), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 93/273 (34%), Positives = 154/273 (56%), Gaps = 14/273 (5%)

Query: 487 SSKDKYLAKPIQELDLSNCERCTP---SYRLLPKNYLIPSASQRTELGAEVLNDHWVS-V 542
           +++++   +P+  LD  + E+      SYR LP + +    S R E+   VLND W+S  
Sbjct: 490 AAEEEAWTRPMGALDRPSREQLHTRYGSYRKLPAHEVHVQCSGRDEMCNAVLNDEWISQP 549

Query: 543 TSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTD 602
           T  SED  F   +KN YEE+L R E++R E D  +E+++ T + +E L  KI   T +  
Sbjct: 550 TFASEDAGFIAHKKNIYEEALHRSEEERHEYDFHIEAIHRTIQVLEPLNNKIAQLTPEER 609

Query: 603 GPIRVEDHF----TALNLRCIERLYG-DHGLDVMDVLRKNASLALPVILTRLKQKQEEWA 657
              +++ +      A++ R I+++YG D GL+V   +++  + A+PV+LTRLKQK EEW 
Sbjct: 610 ANFKLKPNLGGVGKAIHQRVIKKIYGRDPGLEVWTAMQEVPATAIPVVLTRLKQKHEEWK 669

Query: 658 RCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVL 717
           R + +++KVW E+  +NYHKSLDH++  FK  D K++  KA  ++I+   +++R +   L
Sbjct: 670 RAQREWDKVWREVDLRNYHKSLDHQAVTFKAADKKAVTQKAFVSQIEAARDEQRVKRAAL 729

Query: 718 L--AIAAGNRRSIVPHLEFEYSDPDIHEDLYQL 748
           +    A    R     LEF   D  + +D  +L
Sbjct: 730 IDPLFARTKPRH---QLEFVVEDTAVLQDTLKL 759



 Score =  122 bits (306), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 82/249 (32%), Positives = 114/249 (45%), Gaps = 68/249 (27%)

Query: 16  RPMISSRGEPSGQT--QVVGG-----GGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDD 68
           +P+  S GE  GQ    V  G     G GG  + L  +DAL YL  VK  F ++ + Y+ 
Sbjct: 42  QPVKPSEGELQGQVGHAVPTGDHDYSGAGGSERPLNVSDALGYLDQVKMQFSERPDVYNK 101

Query: 69  FLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEI-------------- 114
           FL++MKDFK+Q IDT GVI RV  LF GH  LI GFNTFLP GY I              
Sbjct: 102 FLDIMKDFKSQLIDTPGVIERVSNLFHGHPSLIQGFNTFLPAGYRIETTSHPDPNYITVT 161

Query: 115 -----------------------TLPLEDEQPPPKKPVEFEE----AINFVNKIKTRFQG 147
                                   LP       P+ P+  +E    A+++V K++TR+  
Sbjct: 162 TPAGTTTQATNSVFNYGGNAEHAPLPPPPASHEPEAPIVSQETLKPALDYVTKVRTRYAN 221

Query: 148 DDHVYKSFLDIL-----------NMYRKENKSIT---------EVYQEVEALFQDHPDLL 187
           +  +Y+ FL IL           ++   E+ S+          E  +++  L QD PDL+
Sbjct: 222 EPEMYRKFLSILSESSGTMQDHKDIRGMESWSVACLSAKYPQGETLRKIGVLLQDAPDLM 281

Query: 188 EEFTHFLPD 196
            +F  FLPD
Sbjct: 282 RDFIQFLPD 290


>gi|207341296|gb|EDZ69392.1| YOL004Wp-like protein [Saccharomyces cerevisiae AWRI1631]
          Length = 1364

 Score =  145 bits (367), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 98/272 (36%), Positives = 144/272 (52%), Gaps = 15/272 (5%)

Query: 486 YSSKDKYLAKPIQE---LDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS- 541
           Y  K K +   + E   LDL  CE   PSY+ LPK+      S R ++  EVLND WV  
Sbjct: 554 YQEKTKCIENIVHEKHRLDLDLCEAFGPSYKRLPKSDTFMPCSGRDDMCWEVLNDEWVGH 613

Query: 542 VTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKT 601
               SED  F   RKNQYEE+LF+ E++R E D  +ES   T + +E ++ KI N T   
Sbjct: 614 PVWASEDSGFIAHRKNQYEETLFKIEEERHEYDFYIESNLRTIQCLETIVNKIENMTENE 673

Query: 602 DGPIRVEDHF--TALNL--RCIERLY-GDHGLDVMDVLRKNASLALPVILTRLKQKQEEW 656
               ++      T++ +  + I ++Y  + G +++D L ++ ++  PV+L RLKQK EEW
Sbjct: 674 KANFKLPPGLGHTSMTIYKKVIRKVYDKERGFEIIDALHEHPAVTAPVVLKRLKQKDEEW 733

Query: 657 ARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDV 716
            R + ++NKVW E+  K + KSLDH    FKQ D K L  K L   I EIS  K  + + 
Sbjct: 734 RRAQREWNKVWRELEQKVFFKSLDHLGLTFKQADKKLLTTKQL---ISEISSIKVDQTNK 790

Query: 717 LLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQL 748
            +       +S    L+F++ D +I  D+  L
Sbjct: 791 KIHWLTPKPKS---QLDFDFPDKNIFYDILCL 819



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/74 (58%), Positives = 55/74 (74%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           VEF +AI++VNKIKTRF     +YK FL+IL  Y++E K I EVY +V  LFQ+ PDLLE
Sbjct: 234 VEFSQAISYVNKIKTRFADQPDIYKHFLEILQTYQREQKPINEVYAQVTHLFQNAPDLLE 293

Query: 189 EFTHFLPDSSGAAS 202
           +F  FLPDSS +A+
Sbjct: 294 DFKKFLPDSSASAN 307



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 41/72 (56%), Positives = 52/72 (72%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
           L   DAL+YL+ VK  F  + + Y+ FL++MKDFK+Q IDT GVI RV  LF+G+  LI 
Sbjct: 47  LNVKDALSYLEQVKFQFSSRPDIYNLFLDIMKDFKSQAIDTPGVIERVSTLFRGYPILIQ 106

Query: 103 GFNTFLPKGYEI 114
           GFNTFLP+GY I
Sbjct: 107 GFNTFLPQGYRI 118



 Score = 46.2 bits (108), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 19/69 (27%), Positives = 40/69 (57%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDL 186
           +P+  ++A++++ ++K +F     +Y  FLDI+  ++ +      V + V  LF+ +P L
Sbjct: 45  RPLNVKDALSYLEQVKFQFSSRPDIYNLFLDIMKDFKSQAIDTPGVIERVSTLFRGYPIL 104

Query: 187 LEEFTHFLP 195
           ++ F  FLP
Sbjct: 105 IQGFNTFLP 113



 Score = 43.9 bits (102), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 20/62 (32%), Positives = 36/62 (58%)

Query: 48  ALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTF 107
           A++Y+  +K  F D+ + Y  FLE+++ ++ ++     V A+V  LF+   DL+  F  F
Sbjct: 239 AISYVNKIKTRFADQPDIYKHFLEILQTYQREQKPINEVYAQVTHLFQNAPDLLEDFKKF 298

Query: 108 LP 109
           LP
Sbjct: 299 LP 300



 Score = 41.6 bits (96), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 3/64 (4%)

Query: 349 FSQELSFCEKVKDKLRDD---YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGF 405
           FSQ +S+  K+K +  D    Y+ FL  L  Y +E    +E+ + V  L    PDL++ F
Sbjct: 236 FSQAISYVNKIKTRFADQPDIYKHFLEILQTYQREQKPINEVYAQVTHLFQNAPDLLEDF 295

Query: 406 NGFL 409
             FL
Sbjct: 296 KKFL 299



 Score = 41.2 bits (95), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 5/76 (6%)

Query: 123 PPPKKPVE----FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEA 178
           P P +P+E      E + F  K K R+ G+ H+Y  FL ILN+Y ++   + ++ ++V+ 
Sbjct: 478 PEPTEPIENNISLNEEVTFFEKAK-RYIGNKHLYTEFLKILNLYSQDILDLDDLVEKVDF 536

Query: 179 LFQDHPDLLEEFTHFL 194
               + +L   F +F+
Sbjct: 537 YLGSNKELFTWFKNFV 552


>gi|297276416|ref|XP_002801166.1| PREDICTED: paired amphipathic helix protein Sin3b-like [Macaca
           mulatta]
          Length = 1137

 Score =  145 bits (367), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 130/404 (32%), Positives = 185/404 (45%), Gaps = 65/404 (16%)

Query: 351 QELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGF 408
           QE SF +KV+  L+    Y+ FLRC+ L+ +E+++ SEL  LV   LG++P+L   F  F
Sbjct: 305 QEFSFFDKVRRVLKSQEVYENFLRCIALFNQELVSGSELLQLVSPFLGKFPELFAQFKSF 364

Query: 409 LARCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRL 468
           L   E S    A  MS +S                         DG+  R+ +     R+
Sbjct: 365 LGVKELS---FAPPMSDRS------------------------GDGI-SREIDYASCKRI 396

Query: 469 DKSVAFVNKDV-GPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQR 527
             S   + K    PK S  ++  K L            + C   ++       IP  S  
Sbjct: 397 GSSYRALPKTYQQPKCSGRTAICKELDHWTLLQGSWTDDYCMSKFK---STCWIPGYS-- 451

Query: 528 TELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRV 587
               A VLND WVS  S SED +F   +K  YEE L RCED+RFELD++LE+ N+ T R 
Sbjct: 452 ----AGVLNDTWVSFPSWSEDSTFVSSKKTPYEEQLHRCEDERFELDVVLET-NLATIRA 506

Query: 588 EELLEKINNNTIKTDGPIRVEDHFTALNLRCIERLYGDHGLDVMDVLRKNASLALPVILT 647
              L       +    P++ +        R   + +   G   M  L   A  + P    
Sbjct: 507 GSWL------GLDPGPPVKSQ--------RKTGQPWDASGR--MPWLVPGADPSSP---H 547

Query: 648 RLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEIS 707
           RLK K+EEW   +  FNK+W E Y K Y KSLDH++  FKQ D+K+L +K+L  EI+ + 
Sbjct: 548 RLKAKEEEWREAQQGFNKIWREQYEKAYLKSLDHQAVNFKQNDTKALRSKSLLNEIESVY 607

Query: 708 EKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLIKY 751
           ++ +++          +  S  PHL F Y D  I ED   LI Y
Sbjct: 608 DEHQEQHS-----EGRSAPSSEPHLIFVYEDRQILEDAAALISY 646



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 78/199 (39%), Positives = 102/199 (51%), Gaps = 45/199 (22%)

Query: 69  FLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLP----------- 117
           FLE+MK+FK+Q IDT GVI RV +LF  H DLI+GFN FLP GY I +P           
Sbjct: 64  FLEIMKEFKSQSIDTPGVIRRVSQLFHEHPDLIVGFNAFLPLGYRIDIPKNGKLNIQSPL 123

Query: 118 ------------LED--EQPP-----PKKP-----VEFEEAINFVNKIKTRFQGDDHVYK 153
                        ED  +Q P     P+ P     VEF  AI++VNKIKTRF     +Y+
Sbjct: 124 TSQENSHNHGDGAEDFKQQVPYKEDKPQVPLESDSVEFNNAISYVNKIKTRFLDHPEIYR 183

Query: 154 SFLDILNMYRKEN----------KSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASI 203
           SFL+IL+ Y+KE            S  EV+ EV  LF+   DLL EF  FLP++  +   
Sbjct: 184 SFLEILHTYQKEQLNTRGRPFRGMSEEEVFTEVANLFRGQEDLLSEFGQFLPEAKRSLFT 243

Query: 204 HYVPSGRNSILRDRSSAMP 222
              P   +S+ ++     P
Sbjct: 244 GNGPCEMHSVQKNEHDKTP 262



 Score = 57.4 bits (137), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 50/218 (22%), Positives = 87/218 (39%), Gaps = 61/218 (27%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAG----------VIARVKELFK 95
           N+A++Y+  +K  F D  E Y  FLE++  ++ ++++T G          V   V  LF+
Sbjct: 162 NNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLNTRGRPFRGMSEEEVFTEVANLFR 221

Query: 96  GHRDLILGFNTFLPKG----YEITLPLE---------DEQP-----------------PP 125
           G  DL+  F  FLP+     +    P E         D+ P                 P 
Sbjct: 222 GQEDLLSEFGQFLPEAKRSLFTGNGPCEMHSVQKNEHDKTPEHSRKRSRPSLLRPVSAPA 281

Query: 126 KKPVEFE----------------EAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI 169
           KK ++                  +  +F +K++ R      VY++FL  + ++ +E  S 
Sbjct: 282 KKKMKLRGTKDLSIAAVGKYGTLQEFSFFDKVR-RVLKSQEVYENFLRCIALFNQELVSG 340

Query: 170 TEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVP 207
           +E+ Q V       P+L  +F  FL    G   + + P
Sbjct: 341 SELLQLVSPFLGKFPELFAQFKSFL----GVKELSFAP 374


>gi|345568038|gb|EGX50939.1| hypothetical protein AOL_s00054g675 [Arthrobotrys oligospora ATCC
            24927]
          Length = 1483

 Score =  145 bits (367), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 94/290 (32%), Positives = 147/290 (50%), Gaps = 20/290 (6%)

Query: 498  QELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMRK 556
            Q++ L+ C    PSYRLLPK       S R ++  EVLND W S  T  SED  F   +K
Sbjct: 736  QKVRLNVCRALGPSYRLLPKLEATKPCSGRDDMCREVLNDEWASHPTWASEDSGFVGHKK 795

Query: 557  NQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFTA--- 613
            NQYEE L R E++R + D  +E+   T + +E + ++I   T +     R+         
Sbjct: 796  NQYEEMLHRVEEERHDYDFHIEANLRTIQLLEPINQRIATMTNEEKANFRLSPGLGGQSR 855

Query: 614  -LNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYS 672
             +  RCI+++Y D GL+ +  L +  + A+P+IL RLKQK EEW   + ++N+VW E   
Sbjct: 856  TIYQRCIKKVYRDDGLETIKQLHEQPAYAVPIILRRLKQKDEEWRFAQREWNRVWREQTG 915

Query: 673  KNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHL 732
            K ++KSLDH+   FKQ D ++   +  +AEI           D L  +A  +      HL
Sbjct: 916  KIFYKSLDHQGNTFKQNDKRNTTNRHFNAEI-----------DALYKVADASNTDKSYHL 964

Query: 733  EFEYSDPDIHEDLYQLIKYSC---GEMCTTEQLDKVMKIWTTFLEPMLGV 779
            +F + D D+  D+ +L+       G    +E+  K+ +    F+    G+
Sbjct: 965  KFSFPDLDVLLDICRLLSTQLEKDGAYSYSER-QKISQFIRNFIPTFFGI 1013



 Score =  103 bits (257), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 82/302 (27%), Positives = 138/302 (45%), Gaps = 33/302 (10%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           + PVEF  AI++VNKIKTRF     +YK+FL+IL  Y++E+K I EVY +V  LF   PD
Sbjct: 464 RGPVEFNHAISYVNKIKTRFSSQPEIYKNFLEILQTYQRESKPIQEVYSQVTQLFNAAPD 523

Query: 186 LLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQVHVDKKERAMASHADRDLS 245
           LLE+F  FLP+S+                         ARQ   D   R M         
Sbjct: 524 LLEDFKQFLPESAA-----------------------QARQ-KPDDHPREMNGMGGPGGR 559

Query: 246 VDRPDPDHDRVLLKSDKDQRRRGEKERERRDDHRRERERDDRDFENDVNRDFSMQRFPHK 305
              P   H    L + KD    G+++R  +      R+       N+   D ++   P  
Sbjct: 560 GPPPQ-GHFAPPLAAPKDT---GKRKRPAQPVLSNSRDSGIAPLPNNPLHDLNVGPSPGP 615

Query: 306 RKSARKIEDSTAEPLHQGGEGDENFGMHPVSSSYDDKNAMKSMFSQELSFCEKVKDKL-- 363
           R +A    +   + +H+  E   +  + P   +            +E++F ++V+  +  
Sbjct: 616 RGAA---ANKRPKIMHKAAEAPVSPTLIPAPPTPLLPADPVGATGEEIAFFDRVRKYIGN 672

Query: 364 RDDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLARCEKSEELLADVM 423
           +  Y EFL+ L+L++++++ +S L   +   LG  P+L +    FL   +K+E+ + + +
Sbjct: 673 KQTYNEFLKLLNLFSQDLMDKSLLIVTLETFLGSNPELFNWIKRFLGIQDKAEDSVQNAL 732

Query: 424 SK 425
            K
Sbjct: 733 KK 734



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 41/72 (56%), Positives = 49/72 (68%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
           L   DAL+YL  VK  F +    Y+ FL++MKDFK+Q IDT GVI RV  LF G+ +LI 
Sbjct: 227 LNVKDALSYLDQVKVQFAEHPNVYNQFLDIMKDFKSQAIDTPGVIERVSTLFAGNPNLIQ 286

Query: 103 GFNTFLPKGYEI 114
           GFNTFLP GY I
Sbjct: 287 GFNTFLPPGYRI 298



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/101 (25%), Positives = 55/101 (54%), Gaps = 3/101 (2%)

Query: 97  HRDLILGFNTFLPKGYEITLPL--EDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKS 154
           H++ +       P G  + +P+  +   PP  +P+  ++A+++++++K +F    +VY  
Sbjct: 194 HQEAVATIVNAQPAGL-VNIPIGAQASMPPSYRPLNVKDALSYLDQVKVQFAEHPNVYNQ 252

Query: 155 FLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLP 195
           FLDI+  ++ +      V + V  LF  +P+L++ F  FLP
Sbjct: 253 FLDIMKDFKSQAIDTPGVIERVSTLFAGNPNLIQGFNTFLP 293



 Score = 45.8 bits (107), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 20/65 (30%), Positives = 37/65 (56%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFN 105
           N A++Y+  +K  F  + E Y +FLE+++ ++ +      V ++V +LF    DL+  F 
Sbjct: 470 NHAISYVNKIKTRFSSQPEIYKNFLEILQTYQRESKPIQEVYSQVTQLFNAAPDLLEDFK 529

Query: 106 TFLPK 110
            FLP+
Sbjct: 530 QFLPE 534


>gi|395331224|gb|EJF63605.1| hypothetical protein DICSQDRAFT_178900 [Dichomitus squalens
           LYAD-421 SS1]
          Length = 1578

 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 88/246 (35%), Positives = 139/246 (56%), Gaps = 11/246 (4%)

Query: 511 SYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMRKNQYEESLFRCEDD 569
           SYR LP + +    S R E+   VLND W+S  T  SED  F   +KN YEE+L R E++
Sbjct: 520 SYRKLPAHEVNVQCSGRDEMCNSVLNDEWISQPTFQSEDAGFVAPKKNVYEEALHRSEEE 579

Query: 570 RFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TALNLRCIERLYG- 624
           R E D  +E+++ T + +E L  KI   T +     +++ +      A++ R I+++YG 
Sbjct: 580 RHEYDFHVEAIHRTIQVLEPLNNKILQLTPEERATFKLKPNLGGVGKAIHQRVIKKIYGR 639

Query: 625 DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSF 684
           D G++V   +++  + A+PV+L RLKQK EEW R + +++KVW E+ ++NYHKSLDH+S 
Sbjct: 640 DLGIEVWGAMQEVPATAIPVVLGRLKQKHEEWKRAQREWDKVWREVDARNYHKSLDHQSV 699

Query: 685 YFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLL--AIAAGNRRSIVPHLEFEYSDPDIH 742
            FK  D K++  K    +I+   +++R     L+    A    R     LEF   DP + 
Sbjct: 700 TFKAADKKAITQKVFVTQIEAARDEQRVNRAALIDPLFARTKPRH---QLEFVVEDPAVL 756

Query: 743 EDLYQL 748
           +D  +L
Sbjct: 757 QDALKL 762



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 85/240 (35%), Positives = 112/240 (46%), Gaps = 63/240 (26%)

Query: 20  SSRGEPSGQTQVVGGGG----GGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKD 75
           +S G   GQ      G     GGG + L  +DAL+YL +VK  F ++ E Y+ FL++MKD
Sbjct: 51  TSLGPVDGQIHAAVAGSPEQQGGGERPLNVSDALSYLDSVKLQFAEQPEVYNKFLDIMKD 110

Query: 76  FKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEI---------TLP--------- 117
           FK+Q IDT GVI RV  LF GH  LI GFNTFLP GY I         T+          
Sbjct: 111 FKSQLIDTPGVIERVSNLFHGHPALIQGFNTFLPAGYRIETGDNADPNTITVTTPAGTTT 170

Query: 118 -------------------LEDEQPPPKKPVEFEE----AINFVNKIKTRFQGDDHVYKS 154
                               E   P P+ PV  +E    A+ FV K++TR+     VY+ 
Sbjct: 171 QATNAAFKYGKQQTVTERVAETVNPEPEAPVVSQESLKPALEFVQKLRTRYANQPAVYQR 230

Query: 155 FLDIL---------NMYRKENKSIT---------EVYQEVEALFQDHPDLLEEFTHFLPD 196
           FL  L         ++ R E+ S+          EV  E+  L +D PDL+ +F  FLPD
Sbjct: 231 FLKTLAESGNQGQSDISRMESWSVACLSARYPKGEVMTEIMDLLKDSPDLMRDFVQFLPD 290


>gi|443894392|dbj|GAC71740.1| gluconate kinase [Pseudozyma antarctica T-34]
          Length = 1501

 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 83/229 (36%), Positives = 137/229 (59%), Gaps = 9/229 (3%)

Query: 493 LAKPIQE-LDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYS 550
           +  P++E +DLS C+    SYR LPK+ +  + S R  +  EVLND WVS  T  SE   
Sbjct: 603 VPAPLRERVDLSTCKVYGASYRKLPKSEVNLACSGRDPMCWEVLNDSWVSHPTWASEGEG 662

Query: 551 FKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDH 610
           F   +KN YE++L+R E++R E D  +E+   T   +E +  +I+    +     R++  
Sbjct: 663 FNPHKKNPYEDALYRSEEERHEYDYHIEANLRTIALLEPIAARISTMDNEEKAAFRLKPG 722

Query: 611 F----TALNLRCIERLYG-DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNK 665
                 ++  R I+++YG + GL+V+  L     +++P++L RLKQK EEW R + ++NK
Sbjct: 723 LGGQSKSIYQRVIKKVYGREQGLEVISALHDTPCVSVPIVLHRLKQKDEEWKRAQREWNK 782

Query: 666 VWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEI--KEISEKKRK 712
           VW E+ ++NY+KSLDH+   FK  D K++ AKA  AEI  +++ +++R+
Sbjct: 783 VWREVDARNYYKSLDHQGVNFKTSDKKAITAKAFIAEIEARKLQQQQRR 831



 Score = 93.2 bits (230), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 45/93 (48%), Positives = 59/93 (63%), Gaps = 4/93 (4%)

Query: 117 PLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEV 176
           P+   Q P + PVEF  AIN+VNKIK RF  D   YK FL+IL  Y+KE + I +VY +V
Sbjct: 282 PMTPVQDPKRPPVEFNHAINYVNKIKQRFSQDPDTYKQFLEILQTYQKEQRPIHDVYAQV 341

Query: 177 EALFQDHPDLLEEFTHFLPDSSGAASIHYVPSG 209
             LF++  DLL+EF  FLPD++  +     PSG
Sbjct: 342 TVLFENAKDLLDEFKQFLPDTTAGSQ----PSG 370



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 43/108 (39%), Positives = 52/108 (48%), Gaps = 31/108 (28%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKD--------------------------- 75
           L   DAL+YL  VK  F +  + Y+ FL++MKD                           
Sbjct: 4   LNVKDALSYLDQVKVQFAEHPDVYNRFLDIMKDVSIAPTIHSSASSHSFLPASFHILPAL 63

Query: 76  ----FKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLE 119
               FK+Q IDT GVI RV  LF+GH  LI GFNTFLP GY I   L+
Sbjct: 64  PPHQFKSQSIDTPGVIERVSTLFRGHPSLIQGFNTFLPPGYRIECSLD 111



 Score = 42.7 bits (99), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 20/64 (31%), Positives = 35/64 (54%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFN 105
           N A+ Y+  +K  F    + Y  FLE+++ ++ ++     V A+V  LF+  +DL+  F 
Sbjct: 297 NHAINYVNKIKQRFSQDPDTYKQFLEILQTYQKEQRPIHDVYAQVTVLFENAKDLLDEFK 356

Query: 106 TFLP 109
            FLP
Sbjct: 357 QFLP 360


>gi|71015939|ref|XP_758853.1| hypothetical protein UM02706.1 [Ustilago maydis 521]
 gi|46098371|gb|EAK83604.1| hypothetical protein UM02706.1 [Ustilago maydis 521]
          Length = 2161

 Score =  144 bits (363), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 83/226 (36%), Positives = 138/226 (61%), Gaps = 9/226 (3%)

Query: 496  PIQE-LDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKH 553
            P++E +DL+NC+    SYR LPK+ +  + S R  +  EVLND WVS  T  SE   F  
Sbjct: 1264 PLRERVDLNNCKVYGASYRKLPKSEVNLACSGRDPMCWEVLNDSWVSHPTWASEGEGFNP 1323

Query: 554  MRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF-- 611
             +KN YE++L+R E++R E D  +E+   T   +E +  +I+    +     R++     
Sbjct: 1324 HKKNPYEDALYRSEEERHEYDYHIEANLRTIALLEPIAARISTMDNEEKAAFRLKPGLGG 1383

Query: 612  --TALNLRCIERLYG-DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWA 668
               ++  R I+++YG + GL+V++ L     +++P++L RLKQK EEW R + ++NKVW 
Sbjct: 1384 QSKSIYQRVIKKVYGREQGLEVINALHDTPCVSVPIVLHRLKQKDEEWKRAQREWNKVWR 1443

Query: 669  EIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEI--KEISEKKRK 712
            E+ ++NY+KSLDH+   FK  D K++ AKA  AEI  +++ +++R+
Sbjct: 1444 EVDARNYYKSLDHQGVNFKASDKKAITAKAFIAEIEARKLQQQQRR 1489



 Score =  102 bits (255), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 87/315 (27%), Positives = 129/315 (40%), Gaps = 37/315 (11%)

Query: 117  PLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEV 176
            P+   Q P + PVEF  AIN+VNKIK RF  D   YK FL+IL  Y+KE + I +VY +V
Sbjct: 940  PMTPVQDPKRPPVEFNHAINYVNKIKQRFSQDPDTYKQFLEILQTYQKEQRPIHDVYAQV 999

Query: 177  EALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQVHVDKKERAM 236
              LF++  DLL+EF  FLPD+S  +     PSG    +  + ++                
Sbjct: 1000 TVLFENAKDLLDEFKQFLPDTSAGSQ----PSGGLFNMLGQVTSGLGGNAAGAPAPGAIP 1055

Query: 237  ASHADRDLSVDRPDPDHDRVL---------LKSDKDQRRRGEKERERRDDHRRERERDDR 287
                 R    D PD                  S   ++R G  E  +    + ++ +   
Sbjct: 1056 GQQGFRGGPADAPDASRKAATGAIPGAPGAPSSGSRKKRSGANESGKPSSGKTKKSKHGH 1115

Query: 288  DFENDVNRDFSMQRFPHKRKSARKIEDSTAEP--LHQ-----GGEGDENFGMHPVSS--- 337
              E         QR P  R+       + A P  +H      G    E  G+ P  +   
Sbjct: 1116 KAE---------QRTPPLRQEPMPASPTFAHPGQMHHVYGIDGMVAAEATGLVPQGTVVN 1166

Query: 338  --SYDDKNAMKSMFSQELSFCEKVKDKL--RDDYQEFLRCLHLYTKEIITRSELQSLVGD 393
              S     A  +    E++F ++VK  +  R  Y +FL+ L+LYT++II    L      
Sbjct: 1167 GLSLGQPQAPLATL-DEVAFFDRVKKHIDDRTTYLDFLKLLNLYTQDIIDVKTLVDRAAL 1225

Query: 394  LLGRYPDLMDGFNGF 408
             +G   +L   F G 
Sbjct: 1226 FIGGNRELFATFKGL 1240



 Score = 90.1 bits (222), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 43/77 (55%), Positives = 52/77 (67%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
           L   DAL+YL  VK  F +  + Y+ FL++MKDFK+Q IDT GVI RV  LF+GH  LI 
Sbjct: 704 LNVKDALSYLDQVKVQFAEHPDVYNRFLDIMKDFKSQSIDTPGVIERVSTLFRGHPSLIQ 763

Query: 103 GFNTFLPKGYEITLPLE 119
           GFNTFLP GY I   L+
Sbjct: 764 GFNTFLPPGYRIECSLD 780



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 20/67 (29%), Positives = 40/67 (59%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           +  ++A+++++++K +F     VY  FLDI+  ++ ++     V + V  LF+ HP L++
Sbjct: 704 LNVKDALSYLDQVKVQFAEHPDVYNRFLDIMKDFKSQSIDTPGVIERVSTLFRGHPSLIQ 763

Query: 189 EFTHFLP 195
            F  FLP
Sbjct: 764 GFNTFLP 770



 Score = 41.6 bits (96), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 20/64 (31%), Positives = 35/64 (54%)

Query: 46   NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFN 105
            N A+ Y+  +K  F    + Y  FLE+++ ++ ++     V A+V  LF+  +DL+  F 
Sbjct: 955  NHAINYVNKIKQRFSQDPDTYKQFLEILQTYQKEQRPIHDVYAQVTVLFENAKDLLDEFK 1014

Query: 106  TFLP 109
             FLP
Sbjct: 1015 QFLP 1018


>gi|401885885|gb|EJT49966.1| Sin3 protein [Trichosporon asahii var. asahii CBS 2479]
 gi|406697528|gb|EKD00787.1| Sin3 protein [Trichosporon asahii var. asahii CBS 8904]
          Length = 1230

 Score =  143 bits (361), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 128/442 (28%), Positives = 202/442 (45%), Gaps = 79/442 (17%)

Query: 343 NAMKSMFS-QELSFCEKVKDKLRD--DYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYP 399
           NA +++ S +E++F +KVK  + D   Y EFL+ ++L+T++II    L       +G   
Sbjct: 382 NAPQTLASPEEVAFFDKVKKYIDDKVTYHEFLKLINLFTQDIIDAKVLLDRAALFIGDAG 441

Query: 400 DLMDGFNGFLARCEKSEEL--LADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKD 457
           D+   F     R   +++L  +      +S +  G                     G+ +
Sbjct: 442 DIWATFK----RIVGADDLGHIGHATQAQSGFGFG---------------------GMIN 476

Query: 458 RDREAREKD-RLDKSVAFVNKDVG-PKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLL 515
            D +  E    LD+    V  D G PK+  Y                       PSYR L
Sbjct: 477 IDNQLSENTPMLDR----VKPDYGGPKVKAYG----------------------PSYRKL 510

Query: 516 PKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYS-FKHMRKNQYEESLFRCEDDRFEL 573
           P   +  + + R  +  EVLND WVS  T  +ED + F   RKN YEE+L + E++R E 
Sbjct: 511 PSTEVNLNCTGRDAMCWEVLNDEWVSHPTWAAEDAAPFLAHRKNAYEEALHKSEEERHEY 570

Query: 574 DMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVE--------DHFTALNLRCIERLYG- 624
           D  +E+      R   LLE +NN     D   R           H  ++  R I+++YG 
Sbjct: 571 DFHIEA----NLRTIALLEPLNNKIQAMDPEERAHFNLKAGLGGHSRSIYQRIIKKVYGK 626

Query: 625 DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSF 684
           + G D++  L +N  +ALP++L RLK K EEW + + ++N+VW E  +KN++K+LDH+  
Sbjct: 627 ELGPDIIRALHENPVVALPIVLDRLKAKDEEWKKAQREWNRVWREQDAKNFYKALDHQGV 686

Query: 685 YFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVP--HLEFEYSDPDIH 742
            FK  D K++  K L AE+    E +R+E           R +  P     FE+ D D+ 
Sbjct: 687 VFKSADKKTIATKGLIAEV----EARRREQSNARNALLNPRSTPRPRYQFSFEFKDVDVL 742

Query: 743 EDLYQLIKYSCGEMCTTEQLDK 764
           +D  +LI      M + +  DK
Sbjct: 743 KDALKLIFGYLDRMPSLQPADK 764



 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 44/72 (61%), Positives = 50/72 (69%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
           L   DAL+YL  VK  F D+ E Y+ FL+VMK+FK Q IDT GVI RV  LF+GH  LI 
Sbjct: 30  LNVRDALSYLDQVKIQFADQPEVYNRFLDVMKEFKGQVIDTPGVIDRVSTLFRGHPSLIQ 89

Query: 103 GFNTFLPKGYEI 114
           GFNTFLP GY I
Sbjct: 90  GFNTFLPPGYRI 101



 Score = 84.0 bits (206), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 50/117 (42%), Positives = 68/117 (58%), Gaps = 9/117 (7%)

Query: 123 PPP---KKPV-EFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEA 178
           PPP   + P+ EF  AI+FVNKIK RF  +   YK+FL+IL  Y+++ K I +VY++V  
Sbjct: 237 PPPGNVRAPILEFNHAISFVNKIKNRFNSEPETYKNFLEILQTYQRDQK-IEDVYEQVID 295

Query: 179 LFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQVHVDKKERA 235
           LF++ PDLL EF  FLP+S G     +V +   S       A PT  Q   + KE A
Sbjct: 296 LFKNAPDLLAEFKQFLPESGGFGFGSFVQAAAGS----GQPAPPTGGQKRKETKEAA 348



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 49/101 (48%), Gaps = 2/101 (1%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDL 186
           +P+   +A+++++++K +F     VY  FLD++  ++ +      V   V  LF+ HP L
Sbjct: 28  RPLNVRDALSYLDQVKIQFADQPEVYNRFLDVMKEFKGQVIDTPGVIDRVSTLFRGHPSL 87

Query: 187 LEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQV 227
           ++ F  FLP   G     Y P G    L   ++   T  QV
Sbjct: 88  IQGFNTFLP--PGYRIECYGPEGDPQGLITVTTPTGTVSQV 126



 Score = 43.1 bits (100), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 3/72 (4%)

Query: 40  AQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKA-QRIDTAGVIARVKELFKGHR 98
           A  L  N A++++  +K+ F  + E Y +FLE+++ ++  Q+I+   V  +V +LFK   
Sbjct: 244 APILEFNHAISFVNKIKNRFNSEPETYKNFLEILQTYQRDQKIED--VYEQVIDLFKNAP 301

Query: 99  DLILGFNTFLPK 110
           DL+  F  FLP+
Sbjct: 302 DLLAEFKQFLPE 313


>gi|403411334|emb|CCL98034.1| predicted protein [Fibroporia radiculosa]
          Length = 1357

 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 78/200 (39%), Positives = 123/200 (61%), Gaps = 6/200 (3%)

Query: 511 SYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMRKNQYEESLFRCEDD 569
           SYR LP N +  + S R E+   VLND W+S  T  SED  F+  +KN YEE+L R E++
Sbjct: 561 SYRKLPANEINVTCSGRDEMCRSVLNDEWISQPTFASEDAGFQAHKKNIYEEALHRSEEE 620

Query: 570 RFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFT----ALNLRCIERLYG- 624
           R E D  LE++  T   +E L  KI   + +     +++ +      +++LR ++++YG 
Sbjct: 621 RHEYDFHLEAIYRTIHMLEPLNNKIAQLSPEERNGFKLKPNLGGAGRSIHLRVLKKIYGR 680

Query: 625 DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSF 684
           + GL+V   +++  SLA+PV+L+RLK K EEW R + ++NKVW E+ ++NYHKSLDH+  
Sbjct: 681 EAGLEVYQAMQEAPSLAIPVVLSRLKVKHEEWKRAQREWNKVWREVDARNYHKSLDHQGV 740

Query: 685 YFKQQDSKSLGAKALSAEIK 704
            FK  D K++ A+    +I+
Sbjct: 741 TFKATDKKAITARHFLTQIE 760



 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 71/212 (33%), Positives = 98/212 (46%), Gaps = 58/212 (27%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
           L   DAL YL +VK  FQD+ + Y+ FL++MKDFK+Q IDT GVI RV  LF GH  LI 
Sbjct: 84  LNVTDALTYLDSVKLKFQDRPDVYNKFLDIMKDFKSQIIDTPGVIDRVSSLFHGHPSLIQ 143

Query: 103 GFNTFLPKGYEI------------------------------------TLPLEDEQPPPK 126
           GFNTFLP GY I                                     LP    + P  
Sbjct: 144 GFNTFLPAGYRIDCNTDSLDPNVITVTTPAGTTTWPTHGSFSQGPSSPKLPASHIEVPMH 203

Query: 127 KP---VEFEEAINFVNKIKTRFQGDDHVYKSFLDILN----------MYRKENKSIT--- 170
           +P   V  E A+ ++ ++KTR+  +   Y+ FL+ LN          +   E+ +I    
Sbjct: 204 QPSHDVNLEPALMYIQRVKTRYANEPDRYRKFLETLNPKADMASNYDVRELEHWAIAFLS 263

Query: 171 ------EVYQEVEALFQDHPDLLEEFTHFLPD 196
                 E+ +    LF+D P L++E   FLP+
Sbjct: 264 AGCAQGEIVRSTAKLFRDAPSLMKELIDFLPN 295



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 43/78 (55%)

Query: 118 LEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVE 177
           L+  QP  ++P+   +A+ +++ +K +FQ    VY  FLDI+  ++ +      V   V 
Sbjct: 73  LDAHQPATERPLNVTDALTYLDSVKLKFQDRPDVYNKFLDIMKDFKSQIIDTPGVIDRVS 132

Query: 178 ALFQDHPDLLEEFTHFLP 195
           +LF  HP L++ F  FLP
Sbjct: 133 SLFHGHPSLIQGFNTFLP 150


>gi|449543665|gb|EMD34640.1| hypothetical protein CERSUDRAFT_116814 [Ceriporiopsis subvermispora
           B]
          Length = 1318

 Score =  142 bits (359), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 112/376 (29%), Positives = 185/376 (49%), Gaps = 74/376 (19%)

Query: 352 ELSFCEKVKDKL--RDDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFL 409
           E  F E+VK  L  R+ Y EFL+ ++L+T++II          D+    P L+     FL
Sbjct: 452 ESQFFEQVKRALDNRETYNEFLKLINLFTQDII----------DM----PRLVRESRTFL 497

Query: 410 ARCEKSEELLADVMSKKSL-WNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRL 468
           +  E  E+       K+ L W+E R        +R+R  D E    V  R   A ++   
Sbjct: 498 SDSELMEQF------KRILGWDERR--------ERERLMDAE---SVWTRPMAALDRPSR 540

Query: 469 DKSVAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRT 528
           D+    +N   G                              SYR LP N +  + S R 
Sbjct: 541 DQ----LNLRYG------------------------------SYRKLPANEIGVTCSGRD 566

Query: 529 ELGAEVLNDHWVS-VTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRV 587
           E+   VLND W++  T  SED  F   +KN YEE+L R E++R E D  +++++ T + +
Sbjct: 567 EMCKSVLNDDWIAQPTFASEDAGFLAHKKNVYEEALHRSEEERHEYDFHIDAIHRTIQIL 626

Query: 588 EELLEKINNNTIKTDGPIRVEDHF----TALNLRCIERLYG-DHGLDVMDVLRKNASLAL 642
           E L  KI   + +     +++ +      A++ R I+++YG + G++V   ++   + A+
Sbjct: 627 EPLNSKIAQLSPEDRAAFKLKPNLGGAGKAIHQRVIKKIYGREAGMEVYQAIQDTPAAAI 686

Query: 643 PVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAE 702
           PV+L RLK K EEW R + ++NKVW E+ ++N+HKSLDH+   FK  D K++ AK   ++
Sbjct: 687 PVVLQRLKLKHEEWKRAQREWNKVWREVDARNFHKSLDHQGITFKAADKKAITAKTFVSQ 746

Query: 703 IKEISEKKRKEDDVLL 718
           I+   +++R +   L+
Sbjct: 747 IEAARDEQRAKRAALV 762



 Score =  125 bits (315), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 82/232 (35%), Positives = 109/232 (46%), Gaps = 62/232 (26%)

Query: 27  GQTQVVGGGGGGGAQK-LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAG 85
            Q Q +     G +++ L   DAL+YL +VK  FQD  + Y+ FL++MKDFK+Q IDT G
Sbjct: 81  AQPQPISEVSSGASERPLNVTDALSYLDSVKMQFQDNPDVYNRFLDIMKDFKSQLIDTPG 140

Query: 86  VIARVKELFKGHRDLILGFNTFLPKGYEITLPLEDEQP---------------------- 123
           VI RV  LF GH  LI GFNTFLP GY I    + + P                      
Sbjct: 141 VIERVSNLFHGHPMLIQGFNTFLPAGYRIECTTDTKNPNFITVTTPMGTTTQATNSFAFG 200

Query: 124 -----------PPKKP----------VEFEEAINFVNKIKTRFQGDDHVYKSFLDIL--- 159
                      P  +P          V    A++FV K+KTR+  D   YK FL+IL   
Sbjct: 201 TSLAGTAFANIPRSQPLLSEADSSASVNVAPALSFVQKVKTRYANDPDRYKRFLEILYSS 260

Query: 160 ------NMYRKENKSIT---------EVYQEVEALFQDHPDLLEEFTHFLPD 196
                 ++   E+ S+          +V Q V +LF D P+L+ EFT FLPD
Sbjct: 261 TALPSNDVRDMEHWSVAYLSAYYAQGDVVQNVRSLFHDAPELMREFTEFLPD 312



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 9/96 (9%)

Query: 109 PKGYEITLPLEDEQPPP---------KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDIL 159
           P    I  P +  QP P         ++P+   +A+++++ +K +FQ +  VY  FLDI+
Sbjct: 69  PSEKPIATPSQFAQPQPISEVSSGASERPLNVTDALSYLDSVKMQFQDNPDVYNRFLDIM 128

Query: 160 NMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLP 195
             ++ +      V + V  LF  HP L++ F  FLP
Sbjct: 129 KDFKSQLIDTPGVIERVSNLFHGHPMLIQGFNTFLP 164


>gi|346319805|gb|EGX89406.1| Histone deacetylase interacting [Cordyceps militaris CM01]
          Length = 1435

 Score =  142 bits (359), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 104/321 (32%), Positives = 159/321 (49%), Gaps = 37/321 (11%)

Query: 490 DKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSED 548
           D   A P ++L LSNC    PSYRLLPK   +   S R EL   VLND W S  T  SED
Sbjct: 662 DNRPAPPTEKLSLSNCRGYGPSYRLLPKRERLKPCSGRDELCNSVLNDQWASHPTWASED 721

Query: 549 YSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVE 608
             F   RKNQ+EE L R E++R + D  +E+      +  +LLE I    +      R  
Sbjct: 722 SGFVAHRKNQFEEGLHRIEEERHDYDFYIEA----NLKCIQLLEPIAQQMLVMTPSERES 777

Query: 609 DHF--------TALNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCR 660
            H         T++  R  +++YG+ G+DV++ +  +    +PV+L R+KQK EEW   +
Sbjct: 778 FHMPGALAGQSTSIFKRICKKIYGERGIDVVNDMYSHPFDVVPVLLARMKQKDEEWRFSQ 837

Query: 661 SDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAI 720
            ++ KVW       + KSLDH     K  D ++L AK L   IK   E++R+E  +    
Sbjct: 838 REWEKVWHAQTEHMHLKSLDHMGILVKSTDKRNLTAKHLVDVIKTKHEEQRRERAL---- 893

Query: 721 AAGNRRSIVPHLEF--EYSDPDIHEDLYQLIK-YSC--GEMCTTEQLDKVMKIWTTFLEP 775
                +   P  +F  ++SD D+  DL +L+  YS   G+  T E+ +++++ +  F+  
Sbjct: 894 -----KGKAPRYQFVWDFSDKDVVMDLLRLMMLYSMHNGQHSTQEK-ERILEFFEMFIPA 947

Query: 776 MLGVPSRPQGAEDTEDVVKAK 796
              +P         EDVV+ +
Sbjct: 948 FFDLP---------EDVVQER 959



 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 54/98 (55%), Positives = 65/98 (66%), Gaps = 5/98 (5%)

Query: 17  PMISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDF 76
           PMI+    P+G  Q+ GG   G  Q+   NDAL YL  VK  F D+ + Y+ FL++MKDF
Sbjct: 185 PMINV---PAGGPQMPGGITQG--QQPILNDALTYLDQVKVQFHDQPDVYNRFLDIMKDF 239

Query: 77  KAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEI 114
           K+Q IDT GVI RV ELF GH +LI GFNTFLP GY I
Sbjct: 240 KSQAIDTPGVINRVSELFAGHPNLIQGFNTFLPPGYRI 277



 Score = 95.9 bits (237), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 90/292 (30%), Positives = 129/292 (44%), Gaps = 47/292 (16%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           + PVEF  AI++VNKIK RFQ    +YK FL+IL  Y++E K I +VY +V  LF   PD
Sbjct: 402 RGPVEFNHAISYVNKIKNRFQDKPEIYKQFLEILQTYQREQKPIQDVYAQVTTLFNAAPD 461

Query: 186 LLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQVHV--DKKERAMASHADRD 243
           LLE+F  FLP+++G A      SGR+    + S      +Q      +K   + S A   
Sbjct: 462 LLEDFKQFLPETAGQAK---TASGRS----EDSMGASAGQQAGARDGQKMPPLGSFAPP- 513

Query: 244 LSVDRPDPDHDRVLLKSDKDQRR-RGEKERERRDDHRRERERDDRDFENDVNRDFSMQRF 302
                           + KD++R R EK          E     R     VN      + 
Sbjct: 514 --------------ASASKDKKRARNEKSAAGGVPLLAEVTSQPRLQAAVVNG--KRPKL 557

Query: 303 PHKRKSARKIEDSTAEPLHQGGEGDENFGMHPVSSSYDDKNAMKSMFSQELSFCEKVKDK 362
            H R +A   E S+ EP            + PV        A  +   +E++F EKVK  
Sbjct: 558 SHARGTA---EGSSIEPT-----------LTPVMPEPYPPRASGTSNMEEIAFFEKVKKF 603

Query: 363 L--RDDYQEFLRCLHLYTKEIITRSEL--QSLVGDLLGRYPDLMDGFNGFLA 410
           L  R    EFL+  +L+++ II R+ L  + LV   +   PDL   +  F+ 
Sbjct: 604 LSNRSSMNEFLKLCNLFSQNIIDRNTLFHKGLV--FISSSPDLTTFWKSFVG 653



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 39/65 (60%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFN 105
           N A++Y+  +K+ FQDK E Y  FLE+++ ++ ++     V A+V  LF    DL+  F 
Sbjct: 408 NHAISYVNKIKNRFQDKPEIYKQFLEILQTYQREQKPIQDVYAQVTTLFNAAPDLLEDFK 467

Query: 106 TFLPK 110
            FLP+
Sbjct: 468 QFLPE 472



 Score = 49.7 bits (117), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 21/70 (30%), Positives = 39/70 (55%), Gaps = 1/70 (1%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           ++P+   +A+ +++++K +F     VY  FLDI+  ++ +      V   V  LF  HP+
Sbjct: 204 QQPI-LNDALTYLDQVKVQFHDQPDVYNRFLDIMKDFKSQAIDTPGVINRVSELFAGHPN 262

Query: 186 LLEEFTHFLP 195
           L++ F  FLP
Sbjct: 263 LIQGFNTFLP 272


>gi|242209272|ref|XP_002470484.1| predicted protein [Postia placenta Mad-698-R]
 gi|220730517|gb|EED84373.1| predicted protein [Postia placenta Mad-698-R]
          Length = 1127

 Score =  142 bits (358), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 107/361 (29%), Positives = 172/361 (47%), Gaps = 74/361 (20%)

Query: 352 ELSFCEKVKDKL--RDDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFL 409
           E  F ++VK  L  R+ Y EFL+ ++L+T++II  + L       LG      DG     
Sbjct: 447 ETQFFDRVKRALDNRETYNEFLKLVNLFTQDIIDTARLVRESRSFLG------DG----- 495

Query: 410 ARCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRLD 469
                  EL+A  M     W+E                          RDR A ++D   
Sbjct: 496 -------ELMAQFMDILG-WDE-------------------------RRDRIAVDEDIWT 522

Query: 470 KSVAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTE 529
           + +A +++    ++++                         SYR LP N +    S R E
Sbjct: 523 RPMAALDRPSRNQLNIRYG----------------------SYRRLPMNEVNVICSGRDE 560

Query: 530 LGAEVLNDHWVS-VTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVE 588
           +   VLND W+S  T  SED  F+  R N +EE+L R E++R E D  +E++  T   +E
Sbjct: 561 MCKSVLNDEWISQPTFASEDAGFQTHRNNVFEEALHRSEEERHEYDFHIEAIQRTINMLE 620

Query: 589 ELLEKINNNTIKTDGPIRVEDHF----TALNLRCIERLYG-DHGLDVMDVLRKNASLALP 643
            L  KI   + +     +++ +      +++LR ++++YG D G +V   ++   +LA+P
Sbjct: 621 PLNNKIAQLSPEERSTFKLKPNLGGVGKSVHLRVLKKIYGRDAGFEVYQAMQDVPALAIP 680

Query: 644 VILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEI 703
           V+L+RLK K EEW R + ++NKVW E+ ++NYHKSLDH+   FK  D K + AK    +I
Sbjct: 681 VVLSRLKVKHEEWKRAQREWNKVWREVDAQNYHKSLDHQGVTFKAADKKVITAKFFVNQI 740

Query: 704 K 704
           +
Sbjct: 741 E 741



 Score =  109 bits (272), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 68/223 (30%), Positives = 94/223 (42%), Gaps = 69/223 (30%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
           L   DAL+YL  VK  FQ   E Y+ FL++MKDFK+Q IDT GVI RV  LF GH  LI 
Sbjct: 66  LNVTDALSYLDDVKQKFQANPEVYNRFLDIMKDFKSQLIDTPGVIERVSNLFHGHPTLIQ 125

Query: 103 GFNTFLPKGY--------------------------------------EITLPLEDEQPP 124
           GFNTFLP GY                                       I++P   + PP
Sbjct: 126 GFNTFLPAGYRIDCTTDSLNPNTITVTTPSGTTRQPTNGPFAFGPAASNISVPKAAQPPP 185

Query: 125 PKK-------PVEFEEAINFVNKIKTRFQGDDHVYKSFLDILN----------------- 160
           P +       PV    A+ ++ ++KT +  +   Y+ FL+ L                  
Sbjct: 186 PSEAESSQAPPVNLGPALAYIQRVKTHYANESDKYRRFLEFLTPRPGMGPGAGPSSHEVR 245

Query: 161 -------MYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLPD 196
                   +     +  +V Q +  LF D P L+++F  F+PD
Sbjct: 246 ELEQWAVAFLSARCAQGDVVQRIGKLFHDAPGLMKDFIEFIPD 288



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 40/69 (57%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDL 186
           +P+   +A+++++ +K +FQ +  VY  FLDI+  ++ +      V + V  LF  HP L
Sbjct: 64  RPLNVTDALSYLDDVKQKFQANPEVYNRFLDIMKDFKSQLIDTPGVIERVSNLFHGHPTL 123

Query: 187 LEEFTHFLP 195
           ++ F  FLP
Sbjct: 124 IQGFNTFLP 132


>gi|390599648|gb|EIN09044.1| hypothetical protein PUNSTDRAFT_102594 [Punctularia strigosozonata
           HHB-11173 SS5]
          Length = 1247

 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 168/671 (25%), Positives = 289/671 (43%), Gaps = 151/671 (22%)

Query: 128 PVEFEEAINFVNKIKTRFQGDDHVYKSFLDILN----MYRKENKSITEVYQEVEALFQDH 183
           P  F  A+ FV K++TR   D   Y  FL I++    + ++E  +I     ++E L +  
Sbjct: 181 PEHFPPALLFVQKLRTR--TDPETYAKFLRIMSQGAGLSQEEQSAI---LAQMEKLVEKD 235

Query: 184 PDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQ----------------- 226
            DL   F   + +S       + P+  +++  DR    P  R                  
Sbjct: 236 ADLYASFQAIMSESYMLQHGQHQPA--HTLQHDRRFVSPPPRAPARKDKERTREADRERE 293

Query: 227 ------VHVDKKERAMASHADRDLSVD-RPDPDHDRVLLKSDKDQRRRGEKERERRDDHR 279
                 V V +K +      +R+   D R +   DR ++K  +      E++RE     R
Sbjct: 294 RENAPVVPVKRKRKVPEKEKERERERDVRSESGRDRSVVKKSRGH----ERDREVASSAR 349

Query: 280 RERERDDRDFENDVNRDFSMQRFPHKRKSARKIEDSTAEPLHQGGEGDENFGMHPVSSSY 339
            ER+R     + D +  +S Q   H+            +P H    G      HPV    
Sbjct: 350 -ERDRASAS-DRDRSHHYSQQ---HQ------------QPAHGRSNGPHGPAGHPVQ--- 389

Query: 340 DDKNAMKSMFSQELSFCEKVKDKL--RDDYQEFLRCLHLYTKEIITRSEL----QSLVGD 393
                      ++  F   VK  L  R+ Y EFL+ ++L+T+  I R  L    +S +GD
Sbjct: 390 -----------EDGHFFALVKRALDSRETYAEFLKLVNLFTQGFIDRGRLVAESRSFLGD 438

Query: 394 --LLGRYPDLMDGFNGFLARCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRER 451
             L+ R+ +++          ++ +E+   +    ++                       
Sbjct: 439 GELMARWKEILG--------WDEKKEVFGGIAGMGAI----------------------- 467

Query: 452 DDGVKDRDREAREKDRLDKSVAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPS 511
            +G++ R+RE R+    D+      + VG  M                 D+   E    S
Sbjct: 468 -NGIEKREREGRQTAGADR-----ERTVGLAM---------------RADMHAKE---GS 503

Query: 512 YRLLPKNYLIPSASQRTELGAEVLNDHWVSVTS-GSEDYS---FKHMRKNQYEESLFRCE 567
           YR LP++      S R ++   VLND WVS  S  SED     F   +KN YEE+L R E
Sbjct: 504 YRRLPESERHVLCSGRDDMCKSVLNDEWVSHPSWASEDAGSGGFATHKKNIYEEALHRSE 563

Query: 568 DDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFT----ALNLRCIERLY 623
           ++R E D  +E++  T   +E L  KI           +++ +      A++ R I+++Y
Sbjct: 564 EERHEYDFHIEAIVRTIAMLEPLNHKILQLAPDELAAFKLKPNLNGMGKAVHQRVIKKIY 623

Query: 624 G-DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHR 682
           G + G++V+  +++  +LA+PV+LTRLKQK+EEW R + ++NKVW E  ++NY ++LD+R
Sbjct: 624 GREAGVEVVRAMQETPALAVPVVLTRLKQKEEEWKRAQREWNKVWREADARNYWRALDYR 683

Query: 683 SFYFKQQDSKSLGAKALSAEIKEISE----KKRKEDDVLLAIAAGNRRSIVPHLEFEYSD 738
              F+Q D +++ A+ L ++I+   E    ++ +  D L A     R      LE E ++
Sbjct: 684 GVSFRQADKRAMAARTLVSQIEAAREEQMARRAQYIDPLFA-----RTRPRHQLELEVAE 738

Query: 739 PDIHEDLYQLI 749
             + +D  +LI
Sbjct: 739 MPVLQDAMKLI 749



 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 44/78 (56%), Positives = 54/78 (69%)

Query: 37  GGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKG 96
           G   + L   DAL+YL AVK+ F ++ + Y+ FL++MKDFK+Q IDT GVI RV  LF G
Sbjct: 3   GANERPLNVTDALSYLDAVKNRFSERPDVYNRFLDIMKDFKSQHIDTPGVIERVSTLFAG 62

Query: 97  HRDLILGFNTFLPKGYEI 114
           H  LI GFNTFLP GY I
Sbjct: 63  HPQLIQGFNTFLPAGYRI 80



 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 40/70 (57%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           ++P+   +A+++++ +K RF     VY  FLDI+  ++ ++     V + V  LF  HP 
Sbjct: 6   ERPLNVTDALSYLDAVKNRFSERPDVYNRFLDIMKDFKSQHIDTPGVIERVSTLFAGHPQ 65

Query: 186 LLEEFTHFLP 195
           L++ F  FLP
Sbjct: 66  LIQGFNTFLP 75


>gi|409046902|gb|EKM56381.1| hypothetical protein PHACADRAFT_172101 [Phanerochaete carnosa
           HHB-10118-sp]
          Length = 1166

 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 108/337 (32%), Positives = 176/337 (52%), Gaps = 29/337 (8%)

Query: 511 SYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTS-GSEDYSFKHMRKNQYEESLFRCEDD 569
           SYR LP +      S R E+   VLND WVS  S  SED  F   +KN YEE+L R E++
Sbjct: 431 SYRKLPGSETNVVCSGRDEMCKSVLNDDWVSQPSFASEDAGFLAHKKNAYEEALHRSEEE 490

Query: 570 RFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFT----ALNLRCIERLYG- 624
           R E D  +E+++ T + +E    KIN  + +     +    F     +++LR I+++YG 
Sbjct: 491 RHEYDFHIEAIHRTIQALEPFNSKINQMSPEEKATYKYRPQFQGAAKSIHLRVIKKVYGR 550

Query: 625 DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSF 684
           + G++V   ++    +A+P++L RLKQK +EW R + ++NKVW E+ ++NY+KSLDH+  
Sbjct: 551 EAGVEVFQAMQDVPVVAIPLVLQRLKQKHDEWKRAQREWNKVWKEVDARNYYKSLDHQGI 610

Query: 685 YFKQQDSKSLGAKALSAEIK----EISEKKRKEDDVLLAIAAGNRRSIVPH-LEFEYSDP 739
            FK  D K+L  KA  ++I+    E   K+    D L A      R+   H LE+   D 
Sbjct: 611 TFKTTDKKALTPKAFVSQIEAARDEQMTKRAALVDPLFA------RTYPRHQLEYIIEDV 664

Query: 740 DIHEDLYQLI----KYSCGEMCTTEQLDKVMKIWTTFLEPMLGVPSRPQGAEDTEDVVKA 795
           D+ +D+ +L+      + G++  T++  K+     +F+ P+  +   P  A +   V K 
Sbjct: 665 DMLQDVLKLVCSFLDRTQGQISFTDR-RKIESFLRSFV-PLFLMVDPP--AFNVVFVPKQ 720

Query: 796 KSHTVKSRAASVGDSDGSPDGDAAAMTSKHSNPSRNG 832
                +S    V       D DAA+++S+   P +NG
Sbjct: 721 DGADGESGELDVPMD----DADAASVSSRGGRPGKNG 753



 Score =  119 bits (299), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 119/430 (27%), Positives = 188/430 (43%), Gaps = 95/430 (22%)

Query: 40  AQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRD 99
           A+ L   DAL YL  VK  F D+ + Y+ FL++MKDFK+Q IDT GVI RV  LF+G+  
Sbjct: 2   ARPLNVTDALGYLDCVKQTFADQSDVYNRFLDIMKDFKSQFIDTPGVIERVSTLFRGYPT 61

Query: 100 LILGFNTFLPKGYEITLPLEDE-------------------QPPPKKPV----------- 129
           LI GFNTFLP GY I    + +                   +P P+  +           
Sbjct: 62  LIQGFNTFLPAGYRIECTTDGDNSDLITVTTPAGTTTQAIREPFPRPSMLGDVVIAAPGA 121

Query: 130 -----EFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHP 184
                + E A+ +V ++K R+  D   YK+FL+IL+    +  +  +V   VE LF+   
Sbjct: 122 VDAEQDIERALAYVQRVKNRYANDPQKYKAFLEILS---PDELAGEDVLLRVERLFKADE 178

Query: 185 DLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSA----MPTARQVHVDKKER-----A 235
           DL++ F  FLPD             RN  L+ R+ A    M     +H++ + R     A
Sbjct: 179 DLMKGFYQFLPD-------------RN--LQQRTVARLDDMEEGTPLHLEARHRKKQDGA 223

Query: 236 MASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERRDDHRRERERDDRDFENDVNR 295
            +  A +  S   P     R    ++KD   +GE+E+++  +   +     R  +  V  
Sbjct: 224 SSGAATKVGSSSVP---QKRKRKPAEKD---KGEQEKDKHKEIVPKPGPSKRTKQQHVTS 277

Query: 296 D------FSMQRFP------HKRKSARKIEDSTAEPLHQGGEGDENFGMHP-VSSSYDDK 342
           +        +Q  P      H + + +     +   + Q   G ++  +H  V   YDD 
Sbjct: 278 EAPSPSLAQLQAIPPSPMRTHAQAANQMHTQLSHNQIQQAPNGIQSVSLHSQVPPRYDDA 337

Query: 343 NAMKSMFSQELSFCEKVKDKL--RDDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPD 400
                       F ++VK  L  R+ Y EFL+ ++L+T++II  + L     + LG   +
Sbjct: 338 Q-----------FFDRVKRVLENRETYNEFLKLVNLFTQDIIDTARLVHEARNYLGEG-E 385

Query: 401 LMDGFNGFLA 410
           LM  F   L 
Sbjct: 386 LMAQFREILG 395



 Score = 46.6 bits (109), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 3/85 (3%)

Query: 25  PSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTA 84
           PS    VV    G    +     ALAY++ VK+ + +  +KY  FLE++       +   
Sbjct: 108 PSMLGDVVIAAPGAVDAEQDIERALAYVQRVKNRYANDPQKYKAFLEILS---PDELAGE 164

Query: 85  GVIARVKELFKGHRDLILGFNTFLP 109
            V+ RV+ LFK   DL+ GF  FLP
Sbjct: 165 DVLLRVERLFKADEDLMKGFYQFLP 189


>gi|46134915|ref|XP_389482.1| hypothetical protein FG09306.1 [Gibberella zeae PH-1]
          Length = 1560

 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 99/303 (32%), Positives = 153/303 (50%), Gaps = 24/303 (7%)

Query: 490  DKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSED 548
            D   A P  ++ LSNC    PSYRLLPK   +   S R EL   VLND W S  T  SED
Sbjct: 732  DNRPAPPTDKVSLSNCRGYGPSYRLLPKRERLKPCSGRDELCNSVLNDEWASHPTWASED 791

Query: 549  YSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDG----- 603
              F   RKNQ+EE L R E++R + D  +E+      +  +LLE I    +   G     
Sbjct: 792  SGFVAHRKNQFEEGLHRIEEERHDYDFNIEA----NLKCIQLLEPIAQQMLAMTGQERET 847

Query: 604  ---PIRVEDHFTALNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCR 660
               P  +    T++  R  +++YG+ G+DV++ +  +    +PV+L R+KQK EEW   +
Sbjct: 848  FHMPAALAGQSTSIFKRICKKIYGERGIDVVNDMFTHPFDVVPVLLARMKQKDEEWRFSQ 907

Query: 661  SDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAI 720
             ++ KVW       + KSLDH     KQ D + L AK L   IK   E++R+E     ++
Sbjct: 908  REWEKVWHAQTENMHLKSLDHMGILVKQNDKRHLTAKHLVDVIKTKHEEQRRER----SL 963

Query: 721  AAGNRRSIVPHLEFEYSDPDIHEDLYQLIK-YSC--GEMCTTEQLDKVMKIWTTFLEPML 777
              G  R       +++SD D   DL +L+  YS   G+  + E+ +++++ + +F+    
Sbjct: 964  KGGIPRH---QFSWDFSDKDTIIDLLRLMMLYSLHNGQHSSQEK-ERILEFFESFIPMFF 1019

Query: 778  GVP 780
             +P
Sbjct: 1020 DIP 1022



 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 44/70 (62%), Positives = 51/70 (72%)

Query: 45  TNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGF 104
            NDAL YL  VK  F D+ + Y+ FL++MKDFK+Q IDT GVI RV ELF GH +LI GF
Sbjct: 259 VNDALTYLDQVKVQFHDQPDVYNRFLDIMKDFKSQAIDTPGVINRVSELFAGHPNLIQGF 318

Query: 105 NTFLPKGYEI 114
           NTFLP GY I
Sbjct: 319 NTFLPPGYRI 328



 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 41/76 (53%), Positives = 53/76 (69%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           + PVEF  AI++VNKIK RFQ    +YK FL+IL  Y++E K I +VY +V  LF   PD
Sbjct: 468 RGPVEFNHAISYVNKIKNRFQDKPEIYKQFLEILQTYQREQKPIQDVYAQVTTLFNSAPD 527

Query: 186 LLEEFTHFLPDSSGAA 201
           LLE+F  FLP+S+G A
Sbjct: 528 LLEDFKQFLPESAGQA 543



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 2/85 (2%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFN 105
           N A++Y+  +K+ FQDK E Y  FLE+++ ++ ++     V A+V  LF    DL+  F 
Sbjct: 474 NHAISYVNKIKNRFQDKPEIYKQFLEILQTYQREQKPIQDVYAQVTTLFNSAPDLLEDFK 533

Query: 106 TFLPK--GYEITLPLEDEQPPPKKP 128
            FLP+  G     P   E  PP  P
Sbjct: 534 QFLPESAGQAKQTPNRMEDGPPTGP 558



 Score = 48.9 bits (115), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 35/63 (55%)

Query: 133 EAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTH 192
           +A+ +++++K +F     VY  FLDI+  ++ +      V   V  LF  HP+L++ F  
Sbjct: 261 DALTYLDQVKVQFHDQPDVYNRFLDIMKDFKSQAIDTPGVINRVSELFAGHPNLIQGFNT 320

Query: 193 FLP 195
           FLP
Sbjct: 321 FLP 323


>gi|393213166|gb|EJC98663.1| hypothetical protein FOMMEDRAFT_161494 [Fomitiporia mediterranea
           MF3/22]
          Length = 1184

 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 95/286 (33%), Positives = 147/286 (51%), Gaps = 29/286 (10%)

Query: 506 ERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMRKNQYEESLF 564
           ER   SYR LP      + S R EL   VLND WVS  T  SE+  F   +KN YEE+L 
Sbjct: 508 ERFGKSYRRLPLAETKLACSGRDELCRSVLNDVWVSHPTWASEESGFVAHKKNSYEEALH 567

Query: 565 RCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TALNLRCIE 620
           + E++R E    ++ +  T   ++ L ++I   + +     R+   F     ++  R I+
Sbjct: 568 KSEEERHEFQFYIDIITRTIALLQPLHDRIMEMSAEERNAYRLPPDFGGSSKSIYHRAIK 627

Query: 621 RLYG--DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKS 678
           ++YG    GL+V+  L+   ++A+PV+L RLKQK EEW R + D+NKVW E+ ++N++KS
Sbjct: 628 KVYGRDAQGLEVLQALQDCPAIAVPVVLPRLKQKNEEWRRAQRDWNKVWREVDARNFYKS 687

Query: 679 LDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSI---------- 728
           LDH+   FK  D K +  K+L  EI+    +  +      A A   +RS+          
Sbjct: 688 LDHQGITFKANDKKYITNKSLVTEIEAAKVELAERAARAKARAKSYKRSVPVKPEELDED 747

Query: 729 ---VPHLEFEYSDPDIHEDLYQL---------IKYSCGEMCTTEQL 762
               PHLEF ++D  + +D  +L         I+YS  E  + E+L
Sbjct: 748 AEYAPHLEFTFNDIGVLQDALKLVFSFLDRSTIQYSSHERRSVERL 793



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 45/72 (62%), Positives = 54/72 (75%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
           L   DAL+YL AVK  F D+ + Y++FL++MKDFK+Q IDT GVI RV  LF+GH DLI 
Sbjct: 58  LNVTDALSYLDAVKTQFVDRPDVYNNFLDIMKDFKSQVIDTPGVIERVSMLFRGHNDLIQ 117

Query: 103 GFNTFLPKGYEI 114
           GFNTFLP GY I
Sbjct: 118 GFNTFLPPGYRI 129



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 43/71 (60%), Positives = 50/71 (70%), Gaps = 2/71 (2%)

Query: 130 EFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEE 189
           EF  AI +VNKIKTRF+ D   YK FLDIL+ YRKE     +VY +VE LF+D PDLL E
Sbjct: 234 EFHHAIQYVNKIKTRFEDDPETYKLFLDILHSYRKEQNH-DDVYYKVEVLFRDAPDLLAE 292

Query: 190 FTHFLP-DSSG 199
           F +FLP D SG
Sbjct: 293 FKNFLPMDGSG 303



 Score = 53.1 bits (126), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 46/81 (56%), Gaps = 4/81 (4%)

Query: 119 EDEQPPPK----KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQ 174
           +D Q PP     +P+   +A+++++ +KT+F     VY +FLDI+  ++ +      V +
Sbjct: 44  QDAQVPPPLESGRPLNVTDALSYLDAVKTQFVDRPDVYNNFLDIMKDFKSQVIDTPGVIE 103

Query: 175 EVEALFQDHPDLLEEFTHFLP 195
            V  LF+ H DL++ F  FLP
Sbjct: 104 RVSMLFRGHNDLIQGFNTFLP 124



 Score = 41.6 bits (96), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 7/102 (6%)

Query: 23  GEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRID 82
           G  + Q    G  G GGA   ++ D L +    K   +  RE YD+FL+++  F  + ID
Sbjct: 399 GPAASQGSSTGPSGAGGA---SSQDELTFFDRAKKALE-SREMYDEFLKLLNLFSREIID 454

Query: 83  TAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLEDEQPP 124
              +IAR  E F    +L + F   +  G++     E+E PP
Sbjct: 455 ARTLIARA-EAFLHDPELYVQFKDLM--GWDAKREGENEGPP 493



 Score = 40.0 bits (92), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 3/77 (3%)

Query: 33  GGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKE 92
           G  G  GA +   + A+ Y+  +K  F+D  E Y  FL+++  ++ ++ +   V  +V+ 
Sbjct: 225 GRQGPAGAHEF--HHAIQYVNKIKTRFEDDPETYKLFLDILHSYRKEQ-NHDDVYYKVEV 281

Query: 93  LFKGHRDLILGFNTFLP 109
           LF+   DL+  F  FLP
Sbjct: 282 LFRDAPDLLAEFKNFLP 298


>gi|328850652|gb|EGF99814.1| hypothetical protein MELLADRAFT_94093 [Melampsora larici-populina
           98AG31]
          Length = 1445

 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 117/438 (26%), Positives = 197/438 (44%), Gaps = 74/438 (16%)

Query: 341 DKNAMKSMFSQELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRY 398
           D+   + +  +EL F   VK    D   Y EFL+ ++L+T+++I  + L   +G      
Sbjct: 540 DRIPKRVIAKEELLFFYHVKTYFGDQTTYIEFLKIINLFTQDLIDLNTLVCKIGP----- 594

Query: 399 PDLMDGFNGFLARCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDR 458
                    FL  C +      D++     W E                    D  +   
Sbjct: 595 ---------FLVNCPELFNRFTDIVG----WRE--------------------DQSMLPM 621

Query: 459 DREAREKDRLDKSVAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKN 518
            R+       +   A  +  +  +  +  S+D                 C PSYR +P++
Sbjct: 622 KRKGEANGLPEPKKARCHPTLNTRPVLSGSEDP--------------PECGPSYRQVPES 667

Query: 519 YLIPSASQRTELGAEVLNDHWVSVTSGS--EDYSFKHMRKNQYEESLFRCEDDRFELDML 576
            +  + S R  L + VLND WV    G   ++  F   + N +E +L++ ED+R E D  
Sbjct: 668 DVSLACSGRDALCSAVLNDRWVCAPPGHSIDEQLFTPRQTNSFERALYQAEDERHEYDYH 727

Query: 577 LESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFT--------ALNLRCIERLYG-DHG 627
           +E+ NV   R   LLE IN    + +   R E            ++  R I+++YG +HG
Sbjct: 728 IEA-NV---RTIALLEPINLRIQQMEPEHRAEYRLKPGLGGQSKSIYQRIIKKIYGKEHG 783

Query: 628 LDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFK 687
            +V+  L +N +LA+P++L RLKQK EEW +   D+N+VW E+  KNY K+LDH+   FK
Sbjct: 784 PEVIQALHENPALAVPIVLARLKQKDEEWKKALRDWNRVWREVDGKNYWKALDHQGISFK 843

Query: 688 QQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVP--HLEFEYSDPDIHEDL 745
             D K LG K L  EI+ I  +++++  + L  +      ++P   LE + SD D+  D+
Sbjct: 844 AVDKKMLGNKNLVNEIELIKREQQQKRQLALDPSI---IQLLPKYQLELDLSDTDVFYDV 900

Query: 746 YQLIKYSCGEMCTTEQLD 763
            +++ +    +  +  LD
Sbjct: 901 LKILIHFLDHVPNSAGLD 918



 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 39/73 (53%), Positives = 53/73 (72%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDL 186
           KP+EF  AI +VNKIK R+  D   Y++FLDIL  Y+++ K I EVY++V  LF++ PDL
Sbjct: 280 KPLEFNHAITYVNKIKNRYSSDPKTYQTFLDILQTYQRDAKPIQEVYEQVNHLFREEPDL 339

Query: 187 LEEFTHFLPDSSG 199
           + EF  FLPD+SG
Sbjct: 340 MVEFMQFLPDTSG 352



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 42/72 (58%), Positives = 48/72 (66%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
           L   DAL+YL  VK  FQ+    Y+ FL++MKDFK Q IDT GVI  V  LF+GH  LI 
Sbjct: 61  LNVRDALSYLDQVKLQFQELPGVYNQFLDIMKDFKTQTIDTPGVIDGVSSLFRGHPALIQ 120

Query: 103 GFNTFLPKGYEI 114
           GFNTFLP GY I
Sbjct: 121 GFNTFLPPGYRI 132



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 73/300 (24%), Positives = 121/300 (40%), Gaps = 28/300 (9%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDL 186
           +P+   +A+++++++K +FQ    VY  FLDI+  ++ +      V   V +LF+ HP L
Sbjct: 59  RPLNVRDALSYLDQVKLQFQELPGVYNQFLDIMKDFKTQTIDTPGVIDGVSSLFRGHPAL 118

Query: 187 LEEFTHFLPD------SSGAASIHYVPSGRNS----ILRDRSSAMPTARQVHVDKKERAM 236
           ++ F  FLP       S G AS H   +G NS    I       + T ++V +      +
Sbjct: 119 IQGFNTFLPPGYRIDVSQGEASTH---AGSNSAYNLITVTHPMGVQTQKRVPLQSGGEEI 175

Query: 237 ASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERRDDHRRERERDDRDFENDVNRD 296
            SH   D +   P      V   S  D+  R        +   R          N V   
Sbjct: 176 GSHIIPDTTAAHPSTGVSSVNSMSSADKLTRDNVNSLALNPLPRTM------IPNGVEAS 229

Query: 297 FSMQRFPHKRKSARKIEDSTAEPLHQGGEG---DENFGMHPVSSSYDDKNAMKSM-FSQE 352
            S         S  K +  T + +   G G     +  +   +S+   K+ +K + F+  
Sbjct: 230 ASTSA--ASLVSGPKTKPVTLDVIATHGLGTVRTNSPALSNTASTDASKSTVKPLEFNHA 287

Query: 353 LSFCEKVKDKLRDD---YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFL 409
           +++  K+K++   D   YQ FL  L  Y ++     E+   V  L    PDLM  F  FL
Sbjct: 288 ITYVNKIKNRYSSDPKTYQTFLDILQTYQRDAKPIQEVYEQVNHLFREEPDLMVEFMQFL 347


>gi|15221702|ref|NP_173833.1| paired amphipathic helix domain-containing protein [Arabidopsis
           thaliana]
 gi|182623786|gb|ACB88829.1| At1g24230 [Arabidopsis thaliana]
 gi|332192377|gb|AEE30498.1| paired amphipathic helix domain-containing protein [Arabidopsis
           thaliana]
          Length = 245

 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 78/177 (44%), Positives = 113/177 (63%), Gaps = 13/177 (7%)

Query: 42  KLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLI 101
           K T +D  +Y+ ++K+ F+D+  KY  FLE++ D+ A+R+D    +AR+ EL K HR+L+
Sbjct: 81  KETFHDVRSYIYSLKESFRDEPAKYAQFLEILNDYSARRVDAPSAVARMTELMKDHRNLV 140

Query: 102 LGFNTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDD-HVYKSFLDILN 160
           LGF+  L  G   T PLE E P   K +      NF++K+K RFQG+D HVY+SFL+IL 
Sbjct: 141 LGFSVLLSTGDTKTTPLEAE-PDNNKRI---RVANFISKLKARFQGNDGHVYESFLEILT 196

Query: 161 MYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDR 217
           MY++ NKS+ ++YQEV AL Q H DL+ EF++    ++G       PSG  S  RDR
Sbjct: 197 MYQQGNKSVNDLYQEVVALLQGHEDLVMEFSNVFKRTTG-------PSGSKSA-RDR 245



 Score = 82.8 bits (203), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 50/160 (31%), Positives = 81/160 (50%), Gaps = 16/160 (10%)

Query: 36  GGGGAQKLTTNDALAYLKAVKDIF-QDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELF 94
           GG  +   T ++A +Y+ AVK+ F  D+  KY +FL++M D +A R+D A V+ R++EL 
Sbjct: 3   GGSLSPAFTIDEATSYINAVKEAFGADQPAKYREFLDIMLDLRANRVDLATVVPRMRELL 62

Query: 95  KGHRDLILGFNTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKS 154
           K H +L+L FN FLP   + T               F +  +++  +K  F+ +   Y  
Sbjct: 63  KDHVNLLLRFNAFLPAEAKET---------------FHDVRSYIYSLKESFRDEPAKYAQ 107

Query: 155 FLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFL 194
           FL+ILN Y             +  L +DH +L+  F+  L
Sbjct: 108 FLEILNDYSARRVDAPSAVARMTELMKDHRNLVLGFSVLL 147



 Score = 41.2 bits (95), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 1/65 (1%)

Query: 132 EEAINFVNKIKTRFQGDDHV-YKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEF 190
           +EA +++N +K  F  D    Y+ FLDI+   R     +  V   +  L +DH +LL  F
Sbjct: 13  DEATSYINAVKEAFGADQPAKYREFLDIMLDLRANRVDLATVVPRMRELLKDHVNLLLRF 72

Query: 191 THFLP 195
             FLP
Sbjct: 73  NAFLP 77


>gi|426201272|gb|EKV51195.1| hypothetical protein AGABI2DRAFT_213949 [Agaricus bisporus var.
           bisporus H97]
          Length = 1148

 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 123/445 (27%), Positives = 203/445 (45%), Gaps = 88/445 (19%)

Query: 320 LHQGGEGDENFGMHP-VSSSYDDKNAMKSMFSQELSFCEKVKDKL--RDDYQEFLRCLHL 376
           ++  G       +HP V SS   ++   +  + +L F ++ K  L  R+ Y+EFL+ L L
Sbjct: 329 IYHSGAQSLTMSLHPHVPSSTQVRSPNGTTSADKLLFFDRAKKSLENREVYEEFLKLLSL 388

Query: 377 YTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLARCEKSEELLADVMSKKSLWNEGRIPK 436
           ++KEII    L       LG   +LM  F G +   +K E +            EG  P 
Sbjct: 389 FSKEIIDLKTLVERTKVFLGE-GELMTEFKGLVGWDDKVENV------------EGGPPG 435

Query: 437 SVKVEDRDRDRDRERDDGVKDRDREAREKDRLDKSVAFVNKDVGPKMSMYSSKDKYLAKP 496
           S++                                        GP  ++       LA P
Sbjct: 436 SIRT---------------------------------------GPPEAL-------LALP 449

Query: 497 IQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMR 555
           + + +        PSYR LP + +  + S R +L   VLND WVS  T  SE+  F   +
Sbjct: 450 VDDGE-------GPSYRRLPDSEIRLACSGRDQLCRSVLNDEWVSHPTWASEEAGFMTHK 502

Query: 556 KNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKIN--------NNTIKTDGPIRV 607
           KN +EE+L + E++R E  +++E +  T   +E +  +I         N  +K D    +
Sbjct: 503 KNSFEEALHKSEEERHEYHVVIEGLAKTIAVLEPVYIRIEEMSNEERVNFKLKPD----L 558

Query: 608 EDHFTALNLRCIERLYGDHGLD-VMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKV 666
                A+  R I+R+YG   ++ +   L++  ++A+PV+L RLK K EEW R + +F++ 
Sbjct: 559 GGTCKAIYQRTIKRIYGKENVNEIWQNLQECPAVAVPVVLARLKAKDEEWRRLQREFSRT 618

Query: 667 WAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEIS--EKKRKEDDVLLAIAAGN 724
           W E+ SKN++KSLDH+   FKQ D K++ AK   A+I+ I   +    E +   A A G 
Sbjct: 619 WREVDSKNFYKSLDHQGITFKQNDKKNITAKHFVADIESIKALQLATWEREGKKAFAHG- 677

Query: 725 RRSIVPHLEFEYSDPDIHEDLYQLI 749
             S+   LE+ + D ++  D  +++
Sbjct: 678 --SVGHQLEYSFGDMNVMIDALKMV 700



 Score =  127 bits (318), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 84/241 (34%), Positives = 111/241 (46%), Gaps = 59/241 (24%)

Query: 10  MNSQIKRPMISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDF 69
           M S   +P     G P  Q+  +    G   + L   DAL+YL AVK  F ++ E Y+ F
Sbjct: 1   MKSHTSKP-----GSPLPQSDPLSSEAG---RPLNVTDALSYLDAVKIQFAERPEVYNQF 52

Query: 70  LEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLP------------ 117
           L++MKDFK+Q IDT GVI RV +LF G+  LI GFNTFLP GY I +             
Sbjct: 53  LDIMKDFKSQNIDTPGVIDRVSKLFNGNPYLIQGFNTFLPVGYRIEVSADPSDPNTITVT 112

Query: 118 ---------------------------LEDEQPPPKKPV----------EFEEAINFVNK 140
                                      L   Q PP              +F  AI ++NK
Sbjct: 113 TPQGTTTKSTNGTPSNQVAAAASFLGNLHGRQAPPAANSAAQVDKDGNGQFNNAIQYLNK 172

Query: 141 IKTRFQGDDHVYKSFLDILNMYRKENKSI--TEVYQEVEALFQDHPDLLEEFTHFLPDSS 198
           IK R+  D   YK FLD+L  Y+K+       +V  +V+ LF+D P+LL EF  FL +  
Sbjct: 173 IKLRYSDDPETYKQFLDVLQTYKKDTTPALQAQVSLQVQHLFKDAPELLAEFKVFLGEVG 232

Query: 199 G 199
           G
Sbjct: 233 G 233


>gi|242221103|ref|XP_002476307.1| predicted protein [Postia placenta Mad-698-R]
 gi|220724467|gb|EED78508.1| predicted protein [Postia placenta Mad-698-R]
          Length = 1303

 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 106/361 (29%), Positives = 172/361 (47%), Gaps = 74/361 (20%)

Query: 352 ELSFCEKVKDKL--RDDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFL 409
           E  F ++VK  L  R+ Y EFL+ ++L+T++II  + L       LG      DG     
Sbjct: 447 ETQFFDRVKRALDNRETYNEFLKLVNLFTQDIIDTARLVRESRSFLG------DG----- 495

Query: 410 ARCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRLD 469
                  EL+A  M     W+E                          RDR A ++D   
Sbjct: 496 -------ELMAQFMDILG-WDE-------------------------RRDRIAVDEDIWT 522

Query: 470 KSVAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTE 529
           + +A +++    ++++                         SYR LP N +    S R E
Sbjct: 523 RPMAALDRPSRNQLNIRYG----------------------SYRRLPMNEVNVICSGRDE 560

Query: 530 LGAEVLNDHWVS-VTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVE 588
           +   VLND W+S  T  SED  F+  R N +EE+L R E++R E D  +E++  T   +E
Sbjct: 561 MCKSVLNDEWISQPTFASEDAGFQTHRNNVFEEALHRSEEERHEYDFHIEAIQRTINMLE 620

Query: 589 ELLEKINNNTIKTDGPIRVEDHF----TALNLRCIERLYG-DHGLDVMDVLRKNASLALP 643
            L  KI   + +     +++ +      +++LR ++++YG + G +V   ++   +LA+P
Sbjct: 621 PLNNKIAQLSPEERSTFKLKPNLGGVGKSVHLRVLKKIYGREAGFEVYQAMQDVPALAIP 680

Query: 644 VILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEI 703
           V+L+RLK K EEW R + ++NKVW E+ ++NYHKSLDH+   FK  D K + AK    +I
Sbjct: 681 VVLSRLKVKHEEWKRAQREWNKVWREVDAQNYHKSLDHQGVTFKAADKKVITAKFFVNQI 740

Query: 704 K 704
           +
Sbjct: 741 E 741



 Score =  109 bits (273), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 74/257 (28%), Positives = 103/257 (40%), Gaps = 77/257 (29%)

Query: 17  PMISSRGEPSGQTQVVGGGGGGGA--------QKLTTNDALAYLKAVKDIFQDKREKYDD 68
           P+ SS   P  Q  +     G           + L   DAL+YL  VK  FQ   E Y+ 
Sbjct: 32  PVGSSTTNPDTQPPMQDAAAGTNLDVEPGHIDRPLNVTDALSYLDDVKQKFQANPEVYNR 91

Query: 69  FLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEI-------------- 114
           FL++MKDFK+Q IDT GVI RV  LF GH  LI GFNTFLP GY I              
Sbjct: 92  FLDIMKDFKSQLIDTPGVIERVSNLFHGHPTLIQGFNTFLPAGYRIDCTTDSLNPNTITV 151

Query: 115 ------------------------TLPLEDEQPPPKK-------PVEFEEAINFVNKIKT 143
                                   ++P   + PPP +       PV    A+ ++ ++KT
Sbjct: 152 TTPSGTTRQPTNGPFAFGPAASNVSVPKAAQPPPPSEAESSQAPPVNLGPALAYIQRVKT 211

Query: 144 RFQGDDHVYKSFLDILN------------------------MYRKENKSITEVYQEVEAL 179
            +  +   Y+ FL+ L                          +     +  +V Q +  L
Sbjct: 212 HYANESDKYRRFLEFLTPRPGMGPGAGPSSHEVRELEQWAVAFLSARCAQGDVVQRIGKL 271

Query: 180 FQDHPDLLEEFTHFLPD 196
           F D P L+++F  F+PD
Sbjct: 272 FHDAPGLMKDFIEFIPD 288



 Score = 56.6 bits (135), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 18/104 (17%)

Query: 108 LPKGYEITLPLEDEQPPPK----------------KPVEFEEAINFVNKIKTRFQGDDHV 151
           LP G   T P  D QPP +                +P+   +A+++++ +K +FQ +  V
Sbjct: 31  LPVGSSTTNP--DTQPPMQDAAAGTNLDVEPGHIDRPLNVTDALSYLDDVKQKFQANPEV 88

Query: 152 YKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLP 195
           Y  FLDI+  ++ +      V + V  LF  HP L++ F  FLP
Sbjct: 89  YNRFLDIMKDFKSQLIDTPGVIERVSNLFHGHPTLIQGFNTFLP 132


>gi|384498870|gb|EIE89361.1| hypothetical protein RO3G_14072 [Rhizopus delemar RA 99-880]
          Length = 1006

 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 78/184 (42%), Positives = 99/184 (53%), Gaps = 30/184 (16%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
           L   DAL YL  VK  F ++ + Y+ FL++MKDFK+Q IDT GVI RV  LFKGH +LI 
Sbjct: 18  LNVKDALTYLDQVKTKFANQPDIYNHFLDIMKDFKSQLIDTPGVIERVSSLFKGHPNLIS 77

Query: 103 GFNTFLPKGYEITLPLED------------------------------EQPPPKKPVEFE 132
           GFNTFLP GY I   +++                              EQ     P+E  
Sbjct: 78  GFNTFLPPGYSIECSIDERERNMIKVTTPSGTTTISDSEPLNLRQDTVEQKETTGPLEIN 137

Query: 133 EAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTH 192
            AI +V+KIK  F     VYK FL+IL  Y+K  K I +VY+EV+ LF    +LL EF  
Sbjct: 138 HAITYVHKIKNYFFNQPDVYKRFLEILQTYQKGGKPIQKVYEEVKVLFNGSTELLNEFKQ 197

Query: 193 FLPD 196
           FLP+
Sbjct: 198 FLPE 201



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 79/253 (31%), Positives = 136/253 (53%), Gaps = 29/253 (11%)

Query: 508 CTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMRKNQYEESLFRC 566
           C PSYR + K +     S R  L  +VLND ++S  T  SED +    +KNQYEE+L R 
Sbjct: 346 CGPSYRHISKAWQNNVCSGRDALCWDVLNDTYISHPTWASEDTNSVASKKNQYEEALHRV 405

Query: 567 EDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFTA----LNLRCIERL 622
           E++R++ D+ +E+   T   +E +++KI+  T       ++   F +    +  R ++++
Sbjct: 406 EEERYDYDLNIEANLTTIALLEPIMKKISLMTADEKTSFKLSSDFGSSSKTVYQRILKKV 465

Query: 623 YGDH-GLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDH 681
           YG   GL+++++L  N +  +PV+L RL+QK +EW R + ++NK+W E+ SKNY KSLD+
Sbjct: 466 YGAQKGLEIINLLHSNPAQTVPVVLKRLRQKDDEWKRAQREWNKIWREVESKNYWKSLDY 525

Query: 682 RSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDI 741
           +   FK  D K+L  ++L AE +                        V    +E+ D  +
Sbjct: 526 QGITFKTTDRKTLATRSLVAEAEA-----------------------VKLFNYEFQDASV 562

Query: 742 HEDLYQLIKYSCG 754
            +D+ +L+ +  G
Sbjct: 563 FKDVSRLVYFFLG 575



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 42/69 (60%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDL 186
           +P+  ++A+ +++++KT+F     +Y  FLDI+  ++ +      V + V +LF+ HP+L
Sbjct: 16  RPLNVKDALTYLDQVKTKFANQPDIYNHFLDIMKDFKSQLIDTPGVIERVSSLFKGHPNL 75

Query: 187 LEEFTHFLP 195
           +  F  FLP
Sbjct: 76  ISGFNTFLP 84



 Score = 47.4 bits (111), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 45/195 (23%), Positives = 81/195 (41%), Gaps = 32/195 (16%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
           L  N A+ Y+  +K+ F ++ + Y  FLE+++ ++        V   VK LF G  +L+ 
Sbjct: 134 LEINHAITYVHKIKNYFFNQPDVYKRFLEILQTYQKGGKPIQKVYEEVKVLFNGSTELLN 193

Query: 103 GFNTFLPK-----------------------GYEITLPLEDEQPPPKKPVEF-------E 132
            F  FLP+                        Y+      D +  P + +E+       E
Sbjct: 194 EFKQFLPEPKQKKKRSGNIPSLSISKKSKHHHYKEDAETSDVRSGPNEEMEYARPTFSAE 253

Query: 133 EAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTH 192
           EA  F +K KT + G+   Y +FL +LN++ ++      +   VE+      +L ++F  
Sbjct: 254 EA-EFFDKAKT-YIGNKVTYNAFLKVLNLFSQQMVDQNVLVSRVESFIGGDKELFDQFKI 311

Query: 193 FLPDSSGAASIHYVP 207
            +  +     I  VP
Sbjct: 312 LVGYNGNDEIIENVP 326


>gi|384484290|gb|EIE76470.1| hypothetical protein RO3G_01174 [Rhizopus delemar RA 99-880]
          Length = 938

 Score =  139 bits (350), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 79/238 (33%), Positives = 141/238 (59%), Gaps = 14/238 (5%)

Query: 483 MSMYSSKDKYLAKP---IQELDLSNCERC-----TPSYRLLPKNYLIPSASQRTELGAEV 534
           M  Y SK+  + +P   I + DL+ C+       +PSYR++PK++     S R +L  EV
Sbjct: 473 MIGYESKEHDIERPTHTIPKPDLNTCQTTGNPHESPSYRVVPKDWQNQPCSGRDQLCWEV 532

Query: 535 LNDHWVS-VTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEK 593
           LND +VS     SE+  F   RK+QYEE++ RCE++R+E +M++++       +E + + 
Sbjct: 533 LNDEYVSHPIWASEEDGFVASRKSQYEEAMHRCEEERYEYNMIIDANLNVISLMEPITQS 592

Query: 594 INNNTIKTDGPIRVEDHF----TALNLRCIERLY-GDHGLDVMDVLRKNASLALPVILTR 648
           I   T +     R++         +  R I+++Y  + G++++D+L  + +  +PV+L R
Sbjct: 593 IEQMTPEEKESFRLKPGLGGESVTIYERIIKKIYDKERGMEIIDLLYSSPAYVIPVVLRR 652

Query: 649 LKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEI 706
           LKQK EEW R + ++NK+W E+ +KN++++LD++   FK  D K++  KAL +EI+ +
Sbjct: 653 LKQKDEEWKRAQREWNKIWRELDAKNFYRALDYQGITFKSNDRKAMAPKALVSEIEHM 710



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 46/77 (59%), Positives = 52/77 (67%)

Query: 38  GGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGH 97
            G + L   DAL YL  VK  F DK + Y+ FL++MKDFK+Q IDT GVI RV  LFKGH
Sbjct: 130 NGYRPLNVRDALTYLDQVKIRFSDKPDVYNQFLDIMKDFKSQAIDTPGVIDRVSTLFKGH 189

Query: 98  RDLILGFNTFLPKGYEI 114
             LI GFNTFLP GY I
Sbjct: 190 PTLISGFNTFLPPGYRI 206



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 43/72 (59%), Positives = 52/72 (72%)

Query: 128 PVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLL 187
           P+EF  AIN+VN+IK R+  D  VYK FL+IL  Y+K+NK I EVY  V+ LFQ  PDLL
Sbjct: 288 PLEFNHAINYVNRIKNRYAHDPDVYKQFLEILQTYQKDNKPIQEVYAHVQYLFQGEPDLL 347

Query: 188 EEFTHFLPDSSG 199
           EEF  FLPD +G
Sbjct: 348 EEFKQFLPDITG 359



 Score = 49.7 bits (117), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 37/69 (53%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDL 186
           +P+   +A+ +++++K RF     VY  FLDI+  ++ +      V   V  LF+ HP L
Sbjct: 133 RPLNVRDALTYLDQVKIRFSDKPDVYNQFLDIMKDFKSQAIDTPGVIDRVSTLFKGHPTL 192

Query: 187 LEEFTHFLP 195
           +  F  FLP
Sbjct: 193 ISGFNTFLP 201



 Score = 46.2 bits (108), Expect = 0.096,   Method: Compositional matrix adjust.
 Identities = 23/85 (27%), Positives = 40/85 (47%)

Query: 25  PSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTA 84
           P+  + + G         L  N A+ Y+  +K+ +    + Y  FLE+++ ++       
Sbjct: 271 PTSHSPLAGHHDEDDESPLEFNHAINYVNRIKNRYAHDPDVYKQFLEILQTYQKDNKPIQ 330

Query: 85  GVIARVKELFKGHRDLILGFNTFLP 109
            V A V+ LF+G  DL+  F  FLP
Sbjct: 331 EVYAHVQYLFQGEPDLLEEFKQFLP 355



 Score = 40.0 bits (92), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 20/74 (27%), Positives = 40/74 (54%), Gaps = 2/74 (2%)

Query: 347 SMFSQELSFCEKVKDKL--RDDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDG 404
           S+ ++E+   E+++  +  +  Y+EFL+ L+LYT+ I+  + L   V   +G   +LMD 
Sbjct: 410 SVSAEEIELFERIRKHIGNKPSYEEFLKTLNLYTQHIVDMNTLIDQVSIFIGNNSELMDW 469

Query: 405 FNGFLARCEKSEEL 418
           F   +    K  ++
Sbjct: 470 FKSMIGYESKEHDI 483


>gi|367019176|ref|XP_003658873.1| hypothetical protein MYCTH_99040 [Myceliophthora thermophila ATCC
            42464]
 gi|347006140|gb|AEO53628.1| hypothetical protein MYCTH_99040 [Myceliophthora thermophila ATCC
            42464]
          Length = 1713

 Score =  139 bits (350), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 125/448 (27%), Positives = 198/448 (44%), Gaps = 57/448 (12%)

Query: 496  PIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHM 554
            P   + LSNC    PSYRLLPK   +   S R EL   VLND W S  T  SED  F   
Sbjct: 925  PTGRVSLSNCRGFGPSYRLLPKRERLKPCSGRDELCQSVLNDEWASHPTWASEDSGFVAH 984

Query: 555  RKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDG--------PIR 606
            RKN YEESL R E++R + D  +E+     ++  +LLE I    +            P  
Sbjct: 985  RKNAYEESLHRIEEERHDYDFYIEA----NQKCIQLLEPIAQQMLSLPPSERPNFKMPAG 1040

Query: 607  VEDHFTALNLRCIERLYG-DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNK 665
            +    T++  R ++++YG + G +V + + K     +P+++ RLKQK EEW   + ++ K
Sbjct: 1041 LGGQSTSIYKRVLKKIYGPEKGCEVANDMFKYPFTVVPIVMARLKQKDEEWRFTQREWEK 1100

Query: 666  VWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNR 725
            VW       + KSLDH     K  D ++L AK L   IK   E++R+     + +A G  
Sbjct: 1101 VWQSQTEAMHLKSLDHMGIQVKTNDKRNLSAKHLVDLIKTKHEEQRR-----IRVAKGK- 1154

Query: 726  RSIVPHLEFEY--SDPDIHEDL--YQLIKYSCGEMCTTEQLDKVMKIWTTFLEPMLGVPS 781
                P  +F Y  +D D+  DL  + +I  + G     ++  ++++ + TF+     +P 
Sbjct: 1155 ---TPRYQFAYQFTDEDLILDLLRFMVIFANVGGQHNAQERRRILEFFETFIPIFFDLP- 1210

Query: 782  RPQGAEDTEDVVKAKSHTVKSRAASVGDSDGSP----------DGDAAAMTSKHSNPSRN 831
                    ED V  K   +   +A   D D +P          +G  + +     +PSRN
Sbjct: 1211 --------EDKVSEKLADIDQDSAEEDDEDAAPMELSNGRSRRNGKKSDLLRGVLDPSRN 1262

Query: 832  GDESIPPEQSSSSRAWLPNGDHGIKEDVSVEADHNARKSDNFCDSSEQDKVQNNAAMADE 891
            G  S   ++SS++         G KE        N  ++ +  + S   +V N   +   
Sbjct: 1263 GSRSRGQKESSAAS--------GSKETTPDVGSANEEETPHTPEDSSVPEVSNGRWLPTV 1314

Query: 892  TSGISKQASTNER---LIGTNAAIAAAA 916
               I  + S   R   L+G +  + A A
Sbjct: 1315 PGPIIVEKSKGGRGSDLVGVDGELKADA 1342



 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 83/288 (28%), Positives = 123/288 (42%), Gaps = 32/288 (11%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           + PVEF  AI++VNKIK RFQ    +YK FL+IL  Y++E K I +VY +V +LF   PD
Sbjct: 650 RGPVEFNHAISYVNKIKNRFQDKPEIYKQFLEILQTYQREQKPIQDVYSQVTSLFHTAPD 709

Query: 186 LLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQVHVDKKERAMASHADRDLS 245
           LLE+F  FLP+S+         +  N++    S+  P                H  RD  
Sbjct: 710 LLEDFKQFLPESAAQTRTTSQRAEDNNMAMAASAPTP-------------QPGHVTRDGP 756

Query: 246 VDRPDPDHDRVLLKSDKDQRRRGEKERERRDDHRRERERDD-RDFENDVNRDFSMQRFPH 304
              P  +       S + ++RR EK          + +    R     V       +  H
Sbjct: 757 KMPPVGNFAPPTSASKESKKRRPEKATTAGPSSSEQAQTSSLRATLPAVPPTNKRAKLAH 816

Query: 305 KRK-SARKIEDSTAEPLHQGGEGDENFGMHPVSSSYDDKNAMKSMFSQELSFCEKVKDKL 363
           K   S     + T  P+       E     P++ S  D          +L+F EKVK  +
Sbjct: 817 KPNVSESTFIEPTLTPVM-----PEPLAPTPLAVSTQD----------DLAFFEKVKKHI 861

Query: 364 --RDDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFL 409
             R    EFL+ L+L+T+E+IT   L       +G  P+L++     L
Sbjct: 862 GNRTATTEFLKLLNLWTQELITTDVLLYKANQFMGGNPELLNSLKAML 909



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 45/75 (60%), Positives = 56/75 (74%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFN 105
           NDAL+YL  VK  F ++ + Y+ FL++MKDFK+Q IDT GVI+RV ELF GH +LI GFN
Sbjct: 440 NDALSYLDQVKVQFHEQPDVYNRFLDIMKDFKSQTIDTPGVISRVSELFAGHPNLIQGFN 499

Query: 106 TFLPKGYEITLPLED 120
           TFLP GY I   LE+
Sbjct: 500 TFLPPGYRIECGLEN 514



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 67/315 (21%), Positives = 115/315 (36%), Gaps = 71/315 (22%)

Query: 131 FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEF 190
             +A+++++++K +F     VY  FLDI+  ++ +      V   V  LF  HP+L++ F
Sbjct: 439 LNDALSYLDQVKVQFHEQPDVYNRFLDIMKDFKSQTIDTPGVISRVSELFAGHPNLIQGF 498

Query: 191 THFLP------------------DSSGAASIHYVPSGRNSILRDRSSAMP---------- 222
             FLP                   +   ++IH + +GR S      +A P          
Sbjct: 499 NTFLPPGYRIECGLENNPNSIRVTTPSGSTIHSIGAGRAS---QHDTAQPGGGASQGYMN 555

Query: 223 -----TARQVHVDKKERAMASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERRDD 277
                 A   H  +   A  S   ++     P P H      +   Q+R           
Sbjct: 556 TRPGWQAPLPHGTESPEATFSVPAQNGPSGYPGPSHGAPFDGTSPIQQRSA--------- 606

Query: 278 HRRERERDDRDFENDVNRDFSMQRFPHKRKSARKIEDSTAEPLHQGGEGDENFGMHPVSS 337
                           N++ +    P   ++A      T  P   G  G  N G  P   
Sbjct: 607 --------------PANQNGAPVNHPPAPRTAH-----TPTPAAAGSAGT-NGG--PAQQ 644

Query: 338 SYDDKNAMKSMFSQELSFCEKVKDKLRDD---YQEFLRCLHLYTKEIITRSELQSLVGDL 394
           +  +K      F+  +S+  K+K++ +D    Y++FL  L  Y +E     ++ S V  L
Sbjct: 645 ANLEKRG-PVEFNHAISYVNKIKNRFQDKPEIYKQFLEILQTYQREQKPIQDVYSQVTSL 703

Query: 395 LGRYPDLMDGFNGFL 409
               PDL++ F  FL
Sbjct: 704 FHTAPDLLEDFKQFL 718



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 8/86 (9%)

Query: 33  GGGGGGGAQK--------LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTA 84
            G  GG AQ+        +  N A++Y+  +K+ FQDK E Y  FLE+++ ++ ++    
Sbjct: 635 AGTNGGPAQQANLEKRGPVEFNHAISYVNKIKNRFQDKPEIYKQFLEILQTYQREQKPIQ 694

Query: 85  GVIARVKELFKGHRDLILGFNTFLPK 110
            V ++V  LF    DL+  F  FLP+
Sbjct: 695 DVYSQVTSLFHTAPDLLEDFKQFLPE 720


>gi|449550907|gb|EMD41871.1| hypothetical protein CERSUDRAFT_42152 [Ceriporiopsis subvermispora
           B]
          Length = 1307

 Score =  139 bits (350), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 83/246 (33%), Positives = 139/246 (56%), Gaps = 8/246 (3%)

Query: 510 PSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMRKNQYEESLFRCED 568
           PSYR LP++ +  + S R +L   VLND WVS  T  SE+  F   +KN +E++L + E+
Sbjct: 523 PSYRRLPESEVRLACSGRDQLSRSVLNDQWVSHPTWASEESGFISHKKNSFEDTLHKSEE 582

Query: 569 DRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFTA----LNLRCIERLYG 624
           +R E  + +E+++ T    E L  +I   T +     R+          +  R I+++YG
Sbjct: 583 ERHEYQVHIEALSRTIAVFEPLDARIEEMTPEERSQFRLGPDLGGTSRMIYQRIIKKVYG 642

Query: 625 -DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRS 683
            D GL+++  L+++ S+A+PV+L RLKQK EEW R + ++++ W E+ +KN++K+LDH+ 
Sbjct: 643 RDAGLEIIRALQESPSVAVPVVLARLKQKDEEWRRLQREWSRTWREVDAKNFYKALDHQG 702

Query: 684 FYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHE 743
             FKQ D K + AK    +I+ +  ++ K  D          RS+   LE+E+ D  +  
Sbjct: 703 IMFKQNDKKGITAKHFVQDIESVRAEQAKLRDA--EPVPRFNRSLGHQLEYEFKDLAVLH 760

Query: 744 DLYQLI 749
           D  +LI
Sbjct: 761 DCLKLI 766



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 46/74 (62%), Positives = 53/74 (71%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
           L   DAL+YL AVK  FQDK + Y+ FL++MKDFK+Q IDT GVI RV  LF G+  LI 
Sbjct: 28  LNVTDALSYLDAVKVQFQDKPDVYNHFLDIMKDFKSQVIDTPGVIERVSMLFHGNPYLIQ 87

Query: 103 GFNTFLPKGYEITL 116
           GFNTFLP GY I L
Sbjct: 88  GFNTFLPPGYRIEL 101



 Score = 83.2 bits (204), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 76/300 (25%), Positives = 122/300 (40%), Gaps = 64/300 (21%)

Query: 130 EFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI--TEVYQEVEALFQDHPDLL 187
           EF  AI ++NKIKTRF  D   YK FL+IL  Y+KE K +  ++VY +V+ LF+D PDL+
Sbjct: 225 EFNHAIQYLNKIKTRFADDPETYKQFLEILQTYQKEQKHLHDSQVYAQVQMLFKDAPDLM 284

Query: 188 EEFTHFLPDS-------SGAASIHYVPSGRNSILRDRSSAMPTARQVHVDKKERAMASHA 240
            EF  FLP++       +G ASI    +G  S          T  +     + R      
Sbjct: 285 AEFKDFLPEAMPPAAQQAGLASILPQNAGTTSAWTAVEGTPTTVEKAKPSSRRRKRGPEK 344

Query: 241 DRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERRDDHRRERERDDRDFENDVNRDFSMQ 300
           +   S  +      RV+ K+  +Q+   +  +                        FS  
Sbjct: 345 EPAASAQK--ASSGRVIKKAKTNQKPEPQSPK------------------------FSPY 378

Query: 301 RFPHKRKSARKIEDSTAEPLHQGGEGDENFGMHPVSSSYDDKNA----------MKSMFS 350
           + P     A           H    G  N     +S ++  + A             +  
Sbjct: 379 QGPRSPAGA-----------HAAQAGPSNSQPAQLSRTHSGRTADGGPSAPVPHAGPVVQ 427

Query: 351 QELSFCEKVKDKLRDD--YQEFLRCLHLYT------KEIITRSELQSLVGDLLGRYPDLM 402
            E +F E+ +  L +   Y EFL+ LHL++      K ++ R+E+    GDL+ ++  L+
Sbjct: 428 DEFAFFERARKALENSGTYDEFLKLLHLFSTDVLDLKALVERAEIFLGDGDLMIQFKALV 487



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 22/71 (30%), Positives = 40/71 (56%)

Query: 125 PKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHP 184
           P +P+   +A+++++ +K +FQ    VY  FLDI+  ++ +      V + V  LF  +P
Sbjct: 24  PDRPLNVTDALSYLDAVKVQFQDKPDVYNHFLDIMKDFKSQVIDTPGVIERVSMLFHGNP 83

Query: 185 DLLEEFTHFLP 195
            L++ F  FLP
Sbjct: 84  YLIQGFNTFLP 94



 Score = 47.0 bits (110), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 2/68 (2%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQR--IDTAGVIARVKELFKGHRDLILG 103
           N A+ YL  +K  F D  E Y  FLE+++ ++ ++  +  + V A+V+ LFK   DL+  
Sbjct: 227 NHAIQYLNKIKTRFADDPETYKQFLEILQTYQKEQKHLHDSQVYAQVQMLFKDAPDLMAE 286

Query: 104 FNTFLPKG 111
           F  FLP+ 
Sbjct: 287 FKDFLPEA 294


>gi|116181514|ref|XP_001220606.1| hypothetical protein CHGG_01385 [Chaetomium globosum CBS 148.51]
 gi|88185682|gb|EAQ93150.1| hypothetical protein CHGG_01385 [Chaetomium globosum CBS 148.51]
          Length = 1770

 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 109/362 (30%), Positives = 168/362 (46%), Gaps = 42/362 (11%)

Query: 496  PIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHM 554
            P   + LSNC    PSYRLLPK   +   S R EL   VLND W S  T  SED  F   
Sbjct: 992  PTGRVSLSNCRGFGPSYRLLPKRERLKPCSGRDELCQSVLNDEWASHPTWASEDSGFVAH 1051

Query: 555  RKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDG--------PIR 606
            RKN YEESL R E++R + D  +E+     ++  +LLE I    +            P  
Sbjct: 1052 RKNAYEESLHRIEEERHDYDFFIEA----NQKCIQLLEPIAQQMLSLPTSERPNFKMPAG 1107

Query: 607  VEDHFTALNLRCIERLYG-DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNK 665
            +    T++  R ++++YG + G DV + + K     +PV++ RLKQK EEW   + ++ K
Sbjct: 1108 LGGQSTSIYKRVLKKIYGAEKGCDVANDMFKYPFTVVPVVMARLKQKDEEWRFTQREWEK 1167

Query: 666  VWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNR 725
            VW       + KSLDH     K  D +SL AK L   IK   E++R+       I  G  
Sbjct: 1168 VWQSQTELMHLKSLDHMGIQVKTNDKRSLSAKHLVDMIKTKHEEQRR-------IRVGKG 1220

Query: 726  RSIVPHLEFEYSDPDIHEDL--YQLIKYSCGEMCTTEQLDKVMKIWTTFLEPMLGVPSRP 783
            ++       ++SD ++  DL  + +I  + G    T++  ++++ + +F+         P
Sbjct: 1221 KTPRYQFSHQFSDEELVLDLLRFMVIFANVGGQHNTQERRRIVEFFESFI---------P 1271

Query: 784  QGAEDTEDVVKAKSHTVKSRAASVGDSDGSP----------DGDAAAMTSKHSNPSRNGD 833
            Q  +  ED V  K   +   +A   + D +P          +G  + +     +PSRNG 
Sbjct: 1272 QFFDLAEDKVSEKLADIDQDSAEEDEDDTAPMELTNGRSRRNGKKSDLLRGVLDPSRNGS 1331

Query: 834  ES 835
             S
Sbjct: 1332 RS 1333



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 54/104 (51%), Positives = 66/104 (63%), Gaps = 2/104 (1%)

Query: 17  PMISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDF 76
           P  SS G   G     G GG    Q+   NDAL+YL  VK  F ++ + Y+ FL++MKDF
Sbjct: 482 PFGSSMG--PGHAAPSGPGGMPQGQQPILNDALSYLDQVKVQFHEQPDVYNRFLDIMKDF 539

Query: 77  KAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLED 120
           K+Q IDT GVI+RV ELF GH +LI GFNTFLP GY I   LE+
Sbjct: 540 KSQTIDTPGVISRVSELFAGHPNLIQGFNTFLPPGYRIECGLEN 583



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 84/298 (28%), Positives = 130/298 (43%), Gaps = 35/298 (11%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           + PVEF  AI++VNKIK RFQ    +YK FL+IL  Y++E K I +VY +V +LF   PD
Sbjct: 718 RGPVEFNHAISYVNKIKNRFQDKPEIYKQFLEILQTYQREQKPIQDVYSQVTSLFHTAPD 777

Query: 186 LLEEFTHFLPDSSGAASIHYVPSGRNSILR-DRSSAMPTARQVHVDKKERAMASHADRDL 244
           LLE+F  FLP+S+           R++  R + S A+P +              HA RD 
Sbjct: 778 LLEDFKQFLPESAAQT--------RSAGQRAEESMAIPVSTPT-------PQPGHAARDG 822

Query: 245 SVDRPDPDHDRVLLKSDKDQRRRGEKERERRDDHRRERERDDRDFENDVNRDFSMQR--F 302
               P  +       S ++++RR +K          E  +        +    + +R   
Sbjct: 823 PKMPPVGNFAPPASASKENKKRRPDKTVSGGPSSSAELTQMS-GMRGTLPPAPANKRAKL 881

Query: 303 PHKRKSARKIEDSTAEPLHQGGEGDENFGMHPVSSSYDDKNAMKSMFSQELSFCEKVKDK 362
            HK  +A   E +  EP            + PV         +     ++L+F EKVK  
Sbjct: 882 SHKPNAA---ETAFIEPT-----------LTPVLPEPLAPTPLAVSTQEDLAFFEKVKKH 927

Query: 363 L--RDDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLARCEKSEEL 418
           +  R    EFL+ L+L+T+ +IT   L       +G  P+L+      L +    E +
Sbjct: 928 IGNRTATTEFLKLLNLWTQNLITTEVLIYKANQFMGGNPELLGALKAMLGQGAADEAI 985



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 64/305 (20%), Positives = 120/305 (39%), Gaps = 43/305 (14%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           ++P+   +A+++++++K +F     VY  FLDI+  ++ +      V   V  LF  HP+
Sbjct: 504 QQPI-LNDALSYLDQVKVQFHEQPDVYNRFLDIMKDFKSQTIDTPGVISRVSELFAGHPN 562

Query: 186 LLEEFTHFLPD------------------SSGAASIHYVPSGRNSILRDRSSAMPTARQV 227
           L++ F  FLP                   +   ++IH + +GR +      +A P     
Sbjct: 563 LIQGFNTFLPPGYRIECGLENNPNSIRVTTPSGSTIHSIGAGRAT---QHETAQPGGGPP 619

Query: 228 HVDKKERAMASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERRDDHRRERERDDR 287
                 R   S     LS     P+    +   +      G  +    D     ++R   
Sbjct: 620 QGFLNSR---SGWQPPLSHGADSPEATFSVPAQNGPSGFPGSNQGVPFDSASPIQQRSVP 676

Query: 288 DFENDVNRDFSMQRFPHKRKSARKIEDSTAEPLHQGGEGDENFGMHPVSSSYDDKNAMKS 347
             +N       M + P  R +  +    TA P    G   +        +S + +  ++ 
Sbjct: 677 ATQNGT----PMNQVPVPRTA--QTPTPTAGPPSANGSTAQQ-------ASLEKRGPVE- 722

Query: 348 MFSQELSFCEKVKDKLRDD---YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDG 404
            F+  +S+  K+K++ +D    Y++FL  L  Y +E     ++ S V  L    PDL++ 
Sbjct: 723 -FNHAISYVNKIKNRFQDKPEIYKQFLEILQTYQREQKPIQDVYSQVTSLFHTAPDLLED 781

Query: 405 FNGFL 409
           F  FL
Sbjct: 782 FKQFL 786



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 39/65 (60%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFN 105
           N A++Y+  +K+ FQDK E Y  FLE+++ ++ ++     V ++V  LF    DL+  F 
Sbjct: 724 NHAISYVNKIKNRFQDKPEIYKQFLEILQTYQREQKPIQDVYSQVTSLFHTAPDLLEDFK 783

Query: 106 TFLPK 110
            FLP+
Sbjct: 784 QFLPE 788


>gi|299756346|ref|XP_001829269.2| transcription regulatory protein [Coprinopsis cinerea okayama7#130]
 gi|298411635|gb|EAU92595.2| transcription regulatory protein [Coprinopsis cinerea okayama7#130]
          Length = 1374

 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 85/252 (33%), Positives = 139/252 (55%), Gaps = 12/252 (4%)

Query: 510 PSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMRKNQYEESLFRCED 568
           PSYR LP++    + S R EL   VLND WVS  T  SE+  F   +KNQ+E++L + E+
Sbjct: 618 PSYRRLPESETRLACSGRDELCRSVLNDEWVSHPTWASEESGFVAHKKNQFEDALHKSEE 677

Query: 569 DRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TALNLRCIERLYG 624
           +R E  + +E++  T   +E L  +I     +     +++  F      +  R I+R+YG
Sbjct: 678 ERHEYHVHIEALTRTIAVLEPLCARIEEMPPEERSAFKLKADFGGTSKTIYHRTIKRIYG 737

Query: 625 -DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRS 683
            D+GL+++  L+   S+A+PV+L RLKQ+ EEW R + D+++ W E+ SKN++KSLDH+ 
Sbjct: 738 RDNGLEIIQALQDCPSVAVPVVLARLKQRDEEWKRAQRDWSRTWREVDSKNFYKSLDHQG 797

Query: 684 FYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNR------RSIVPHLEFEYS 737
             FK  D K++ AK    EI  + +++    D        N+       +I   LE+ ++
Sbjct: 798 ISFKPIDKKNITAKHFCTEIDTVKKQQIAALDPPTPYPQTNKGRLFKAGTIGHQLEYTFN 857

Query: 738 DPDIHEDLYQLI 749
           D  +  D  +LI
Sbjct: 858 DTSVLLDSLKLI 869



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 45/78 (57%), Positives = 54/78 (69%)

Query: 37  GGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKG 96
           G  ++ L   DAL+YL AVK  F +K E Y+ FL++MKDFK+Q IDT GVI RV  LF G
Sbjct: 101 GTESRPLNVTDALSYLDAVKSQFNEKPEVYNQFLDIMKDFKSQNIDTPGVIQRVSRLFHG 160

Query: 97  HRDLILGFNTFLPKGYEI 114
           +  LI GFNTFLP GY I
Sbjct: 161 NPTLIQGFNTFLPVGYRI 178



 Score = 74.3 bits (181), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 33/70 (47%), Positives = 49/70 (70%), Gaps = 2/70 (2%)

Query: 130 EFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI--TEVYQEVEALFQDHPDLL 187
           +F  AI ++NKIK R+  D + YK FLDIL  Y+KE + +  ++VY +V+ LF+D PDL+
Sbjct: 322 DFNLAIQYLNKIKARYADDPNTYKQFLDILQTYQKEQRHLHDSQVYVQVQMLFKDAPDLI 381

Query: 188 EEFTHFLPDS 197
            EF  FLP++
Sbjct: 382 AEFKAFLPEA 391



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 40/69 (57%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDL 186
           +P+   +A+++++ +K++F     VY  FLDI+  ++ +N     V Q V  LF  +P L
Sbjct: 105 RPLNVTDALSYLDAVKSQFNEKPEVYNQFLDIMKDFKSQNIDTPGVIQRVSRLFHGNPTL 164

Query: 187 LEEFTHFLP 195
           ++ F  FLP
Sbjct: 165 IQGFNTFLP 173



 Score = 42.4 bits (98), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 2/68 (2%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDF-KAQR-IDTAGVIARVKELFKGHRDLILG 103
           N A+ YL  +K  + D    Y  FL++++ + K QR +  + V  +V+ LFK   DLI  
Sbjct: 324 NLAIQYLNKIKARYADDPNTYKQFLDILQTYQKEQRHLHDSQVYVQVQMLFKDAPDLIAE 383

Query: 104 FNTFLPKG 111
           F  FLP+ 
Sbjct: 384 FKAFLPEA 391


>gi|402222532|gb|EJU02598.1| hypothetical protein DACRYDRAFT_115639 [Dacryopinax sp. DJM-731 SS1]
          Length = 1687

 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 79/216 (36%), Positives = 122/216 (56%), Gaps = 13/216 (6%)

Query: 500  LDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMRKNQ 558
            L++   +   PSYR LPK+ +    S R  L  EVLND W+S  T  SE+  F   +KN 
Sbjct: 820  LNIDQLKPHGPSYRKLPKSEINLECSGRDALCWEVLNDQWISHPTWASEEAGFSAHKKNS 879

Query: 559  YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDG--------PIRVEDH 610
            +EE++ R E++R E D  +E+ N+   R   +LE IN   +  D         P  +   
Sbjct: 880  FEEAMHRSEEERHEFDFHVEA-NI---RTISMLEPINQRILTMDQDEKSKLRLPPGLGGQ 935

Query: 611  FTALNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEI 670
               +  R I+++Y D   +VM  L+++ ++A+PV+L RLKQK EEW + + ++NKVW E+
Sbjct: 936  SKGIYARIIKKVYPDTHAEVMQALQESPAIAVPVVLARLKQKDEEWRKAQREWNKVWREV 995

Query: 671  YSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEI 706
             ++N++KSLDH S  FK +D K    K +  EI+ I
Sbjct: 996  EARNFYKSLDHMSATFKAEDKKRFNPKRVQEEIEVI 1031



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 42/72 (58%), Positives = 50/72 (69%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
           L   DAL YL  VK+ F D+ + Y+ FL++MKDFK+Q IDT  VI RV +LF GH  LI 
Sbjct: 278 LNVKDALTYLDQVKNEFTDRADVYNLFLDIMKDFKSQSIDTPRVIERVSQLFAGHNQLIQ 337

Query: 103 GFNTFLPKGYEI 114
           GFNTFLP GY I
Sbjct: 338 GFNTFLPPGYRI 349



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 35/72 (48%), Positives = 46/72 (63%)

Query: 125 PKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHP 184
           P   V    A+NFVN+IK RF  +   YKSFLDIL  Y++  + I EV+Q+V  LF+   
Sbjct: 489 PGAEVPINHAMNFVNEIKIRFSHEPDKYKSFLDILQTYQQRARPIAEVFQQVNELFEGQE 548

Query: 185 DLLEEFTHFLPD 196
           DL++EF  FLPD
Sbjct: 549 DLIQEFQEFLPD 560



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 41/77 (53%)

Query: 33  GGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKE 92
           GG       ++  N A+ ++  +K  F  + +KY  FL++++ ++ +    A V  +V E
Sbjct: 483 GGTAIAPGAEVPINHAMNFVNEIKIRFSHEPDKYKSFLDILQTYQQRARPIAEVFQQVNE 542

Query: 93  LFKGHRDLILGFNTFLP 109
           LF+G  DLI  F  FLP
Sbjct: 543 LFEGQEDLIQEFQEFLP 559



 Score = 43.9 bits (102), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 19/67 (28%), Positives = 36/67 (53%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           +  ++A+ +++++K  F     VY  FLDI+  ++ ++     V + V  LF  H  L++
Sbjct: 278 LNVKDALTYLDQVKNEFTDRADVYNLFLDIMKDFKSQSIDTPRVIERVSQLFAGHNQLIQ 337

Query: 189 EFTHFLP 195
            F  FLP
Sbjct: 338 GFNTFLP 344


>gi|409083671|gb|EKM84028.1| hypothetical protein AGABI1DRAFT_110625 [Agaricus bisporus var.
           burnettii JB137-S8]
          Length = 832

 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 122/429 (28%), Positives = 204/429 (47%), Gaps = 80/429 (18%)

Query: 332 MHP-VSSSYDDKNAMKSMFSQELSFCEKVKDKL--RDDYQEFLRCLHLYTKEIITRSELQ 388
           +HP V SS   ++   +  + +L F ++ K  L  R+ Y+EFL+ L L++KEII    L 
Sbjct: 3   LHPHVPSSTQVRSPNGTTSADKLLFFDRAKKSLENREVYEEFLKLLSLFSKEIIDLKTLV 62

Query: 389 SLVGDLLGRYPDLMDGFNGFLARCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRD 448
                 LG   +LM  F G +   +K E +            EG  P S++         
Sbjct: 63  ERTKVFLGE-GELMTEFKGLVGWDDKVENV------------EGGPPGSIRT-------- 101

Query: 449 RERDDGVKDRDREAREKDRLDKSVAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERC 508
                                          GP  ++       LA P+ + +       
Sbjct: 102 -------------------------------GPPEAL-------LALPVDDGE------- 116

Query: 509 TPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMRKNQYEESLFRCE 567
            PSYR LP + +  + S R +L   VLND WVS  T  SE+  F   +KN +EE+L + E
Sbjct: 117 GPSYRRLPDSEIRLACSGRDQLCRSVLNDEWVSHPTWASEEAGFMTHKKNSFEEALHKSE 176

Query: 568 DDRFELDMLLESVNVTTKRVEELLEKIN--NNTIKTDGPIRVEDHFT--ALNLRCIERLY 623
           ++R E  +++E +  T   +E +  +I   +N  + +  ++ +   T  A+  R I+R+Y
Sbjct: 177 EERHEYHVVIEGLAKTIAVLEPVYIRIEEMSNEERVNFKLKPDLGGTCKAIYQRTIKRIY 236

Query: 624 GDHGLD-VMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHR 682
           G   ++ +   L++  ++A+PV+L RLK K EEW R + +F++ W E+ SKN++KSLDH+
Sbjct: 237 GKENVNEIWQNLQECPAVAVPVVLARLKAKDEEWRRLQREFSRTWREVDSKNFYKSLDHQ 296

Query: 683 SFYFKQQDSKSLGAKALSAEIKEIS--EKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPD 740
              FKQ D K++ AK   A+I+ I   +    E +   A A G   S+   LE+ +SD +
Sbjct: 297 GITFKQNDKKNITAKHFVADIESIKALQLATWEREGKKAFAHG---SVGHQLEYSFSDMN 353

Query: 741 IHEDLYQLI 749
           +  D  +++
Sbjct: 354 VMIDALKMV 362


>gi|302924514|ref|XP_003053906.1| histone deacetylase complex protein [Nectria haematococca mpVI
           77-13-4]
 gi|256734847|gb|EEU48193.1| histone deacetylase complex protein [Nectria haematococca mpVI
           77-13-4]
          Length = 1463

 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 95/303 (31%), Positives = 152/303 (50%), Gaps = 24/303 (7%)

Query: 490 DKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSED 548
           D   A P  ++ LSNC    PSYRLLPK   +   S R EL   VLND W S  T  SED
Sbjct: 676 DNRPAPPTDKVSLSNCRGYGPSYRLLPKRERLKPCSGRDELCNSVLNDEWASHPTWASED 735

Query: 549 YSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDG----- 603
             F   RKNQ+EE L R E++R + D  +E+      +  +LLE I    +         
Sbjct: 736 SGFVAHRKNQFEEGLHRIEEERHDYDFNIEA----NLKCIQLLEPIAQQMLAMSPTERET 791

Query: 604 ---PIRVEDHFTALNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCR 660
              P  +    T++  R  +++YGD G+DV++ +  +    +PV+L R+KQK EEW   +
Sbjct: 792 FQMPAALAGQSTSIFKRICKKIYGDRGIDVVNDMYTHPFDVVPVLLARMKQKDEEWRFSQ 851

Query: 661 SDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAI 720
            ++ KVW       + KSLDH     +Q D ++L AK L   IK   E++R+E  +    
Sbjct: 852 REWEKVWHAQTQSMHLKSLDHMGILVRQNDKRNLTAKHLVDVIKTKHEEQRRERSL---- 907

Query: 721 AAGNRRSIVPHLEFEYSDPDIHEDLYQLIK-YSC--GEMCTTEQLDKVMKIWTTFLEPML 777
              N ++      ++++D +   DL +L+  YS   G+  + E+ +++++ +  F+    
Sbjct: 908 ---NGKAPRHQFVWDFADKNTVIDLLRLMMLYSLHNGQHSSQEK-ERILEFFEMFIPAFF 963

Query: 778 GVP 780
            +P
Sbjct: 964 DIP 966



 Score =  103 bits (257), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 86/287 (29%), Positives = 126/287 (43%), Gaps = 33/287 (11%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           + PVEF  AI++VNKIK RFQ    +YK FL+IL  Y++E K I +VY +V  LF   PD
Sbjct: 412 RGPVEFNHAISYVNKIKNRFQDKPEIYKQFLEILQTYQREQKPIQDVYAQVTTLFNSAPD 471

Query: 186 LLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQVHVDKKERAMASHADRDLS 245
           LLE+F  FLP+S+G A       GR   + D +   P+       +  + M       L 
Sbjct: 472 LLEDFKQFLPESAGQAKQT---PGR---MEDGTPTGPSHTPQPAMRDGQKMPP-----LG 520

Query: 246 VDRPDPDHDRVLLKSDKDQRRRGEKERERRDDHRRERERDDRDFENDVNRDFSMQRFPHK 305
              P     +     D  +R R +K+  +      E     R     VN +    +  H 
Sbjct: 521 SFAPPASASK-----DNKKRLRADKQAAQPATVLAEVTAAARLMPPAVNGN-KRPKLNHA 574

Query: 306 RKSARKIEDSTAEPLHQGGEGDENFGMHPVSSSYDDKNAMKSMFSQELSFCEKVKDKL-- 363
           R S    E S  EP            + PV        +  +    E++F E+VK  L  
Sbjct: 575 RASG---EGSAVEPT-----------LTPVMPEPYPPRSSSTSNQDEIAFFERVKKFLSN 620

Query: 364 RDDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLA 410
           R    EFL+  +L+++ II R+ L       +G  PDLM+ +  F+ 
Sbjct: 621 RSSMNEFLKLCNLFSQNIIDRNTLFHKGALFIGANPDLMNFWKSFVG 667



 Score = 99.4 bits (246), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 50/89 (56%), Positives = 59/89 (66%), Gaps = 2/89 (2%)

Query: 26  SGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAG 85
           S   Q+ GG   G  Q+   NDAL YL  VK  F D+ + Y+ FL++MKDFK+Q IDT G
Sbjct: 186 SAAHQIPGGITQG--QQPILNDALTYLDQVKVQFHDQPDVYNRFLDIMKDFKSQAIDTPG 243

Query: 86  VIARVKELFKGHRDLILGFNTFLPKGYEI 114
           VI RV ELF GH +LI GFNTFLP GY I
Sbjct: 244 VINRVSELFAGHPNLIQGFNTFLPPGYRI 272



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 4/90 (4%)

Query: 25  PSGQTQVVGGGGGGGAQK----LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQR 80
           PSG   V G        +    +  N A++Y+  +K+ FQDK E Y  FLE+++ ++ ++
Sbjct: 393 PSGPAAVNGNAANQANMERRGPVEFNHAISYVNKIKNRFQDKPEIYKQFLEILQTYQREQ 452

Query: 81  IDTAGVIARVKELFKGHRDLILGFNTFLPK 110
                V A+V  LF    DL+  F  FLP+
Sbjct: 453 KPIQDVYAQVTTLFNSAPDLLEDFKQFLPE 482



 Score = 49.3 bits (116), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 21/70 (30%), Positives = 39/70 (55%), Gaps = 1/70 (1%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           ++P+   +A+ +++++K +F     VY  FLDI+  ++ +      V   V  LF  HP+
Sbjct: 199 QQPI-LNDALTYLDQVKVQFHDQPDVYNRFLDIMKDFKSQAIDTPGVINRVSELFAGHPN 257

Query: 186 LLEEFTHFLP 195
           L++ F  FLP
Sbjct: 258 LIQGFNTFLP 267


>gi|358387806|gb|EHK25400.1| hypothetical protein TRIVIDRAFT_33123 [Trichoderma virens Gv29-8]
          Length = 1505

 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 107/337 (31%), Positives = 166/337 (49%), Gaps = 35/337 (10%)

Query: 490  DKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSED 548
            D   A P++++ LSNC    PSYRLLPK   +   S R EL   VLND W S  T  SED
Sbjct: 730  DNRPAPPLEKVSLSNCRGYGPSYRLLPKRERLKPCSGRDELCNSVLNDEWASHPTWASED 789

Query: 549  YSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDG----- 603
              F   RKNQ+EE L R E++R + D  +E+      +  +LLE I    +         
Sbjct: 790  SGFVAHRKNQFEEGLHRIEEERHDYDFNIEA----NLKCIQLLEPIAQQMLAMSPSEREA 845

Query: 604  ---PIRVEDHFTALNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCR 660
               P  +    T++  R  +++YG+ G+DV++ +  N    +PV+L R+KQK EEW   +
Sbjct: 846  FHMPSALAGQSTSIFKRICKKIYGERGIDVVNDMYTNPFDVIPVLLARMKQKDEEWRFSQ 905

Query: 661  SDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAI 720
             ++ KVW       + KSLDH     K  D ++L AK L   IK   E++R+E  +L   
Sbjct: 906  REWEKVWHAQTHNMHLKSLDHMGILVKSTDKRNLTAKHLVDVIKTKHEEQRRE-RILKGK 964

Query: 721  AAGNRRSIVPHLEFEYSDPDIHEDLYQLIK-YSC--GEMCTTEQLDKVMKIWTTFLEPML 777
            A   R   V    +++ D ++  DL +L+  YS   G+    E+ ++++  + TF+    
Sbjct: 965  AP--RHQFV----WDFKDKEVVLDLLRLMMLYSMHNGQHSGQEK-ERILDFFETFIPAFF 1017

Query: 778  GVPS----------RPQ-GAEDTEDVVKAKSHTVKSR 803
             +P           +P+ G E+ ED   A+    +SR
Sbjct: 1018 DLPEEVVQERVPKMQPESGEEEIEDQTPAELTNGRSR 1054



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 86/290 (29%), Positives = 126/290 (43%), Gaps = 39/290 (13%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           + PVEF  AI++VNKIK RFQ    +YK FL+IL  Y++E K I +VY +V  LF   PD
Sbjct: 466 RGPVEFNHAISYVNKIKNRFQDKPEIYKQFLEILQTYQREQKPIQDVYAQVTTLFNSAPD 525

Query: 186 LLEEFTHFLPDSSGAASIHYVPSGR---NSILRDRSSAMPTARQVHVDKKERAMASHADR 242
           LLE+F  FLP+S+G A     P GR    ++     +  P  R     +K   + S    
Sbjct: 526 LLEDFKQFLPESAGQAR---APPGRPDDGAVAGSSHTPQPGMRD---GQKMPPLGSF--- 576

Query: 243 DLSVDRPDPDHDRVLLKSDKDQRRRGEKERERRDDHRRERERDDRDFENDVNRDFSMQRF 302
                 P P    V    D  +R R +K+         E     R     +N      + 
Sbjct: 577 ------PPP----VSAGKDNKKRPRTDKQTPTPGSILTEPPVSTRLPPQTINGS-KRPKL 625

Query: 303 PHKRKSARKIEDSTAEPLHQGGEGDENFGMHPVSSSYDDKNAMKSMFSQELSFCEKVKDK 362
            H R S   I   + EP            + PV        +  +   +E++F E+VK  
Sbjct: 626 SHARGSGDGI---SIEPT-----------LTPVMPEPYPPRSPATSNQEEIAFFERVKKF 671

Query: 363 L--RDDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLA 410
           L  R    EFL+  +L+++ II ++ L       +G  PDLM  +  F+ 
Sbjct: 672 LSNRSSMNEFLKLCNLFSQNIIDKNTLYHKGALFIGASPDLMAFWKAFVG 721



 Score = 95.5 bits (236), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 50/104 (48%), Positives = 62/104 (59%), Gaps = 14/104 (13%)

Query: 25  PSGQTQVVGGGGGGGAQKLTT--------------NDALAYLKAVKDIFQDKREKYDDFL 70
           P+G  +VV    GGG + +                +DAL YL  VK  F D+ + Y+ FL
Sbjct: 222 PAGAREVVTAFVGGGERLILACRDDTKLWGFYHHFHDALTYLDQVKVQFHDQPDVYNRFL 281

Query: 71  EVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEI 114
           ++MKDFK+Q IDT GVI RV ELF GH +LI GFNTFLP GY I
Sbjct: 282 DIMKDFKSQAIDTPGVINRVSELFAGHPNLIQGFNTFLPPGYRI 325



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 5/91 (5%)

Query: 25  PSGQTQVVGGGGGGGAQ-----KLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQ 79
           P+     V GG    A       +  N A++Y+  +K+ FQDK E Y  FLE+++ ++ +
Sbjct: 446 PTSGPGAVNGGAANPANMERRGPVEFNHAISYVNKIKNRFQDKPEIYKQFLEILQTYQRE 505

Query: 80  RIDTAGVIARVKELFKGHRDLILGFNTFLPK 110
           +     V A+V  LF    DL+  F  FLP+
Sbjct: 506 QKPIQDVYAQVTTLFNSAPDLLEDFKQFLPE 536



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 36/65 (55%)

Query: 131 FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEF 190
           F +A+ +++++K +F     VY  FLDI+  ++ +      V   V  LF  HP+L++ F
Sbjct: 256 FHDALTYLDQVKVQFHDQPDVYNRFLDIMKDFKSQAIDTPGVINRVSELFAGHPNLIQGF 315

Query: 191 THFLP 195
             FLP
Sbjct: 316 NTFLP 320


>gi|310789979|gb|EFQ25512.1| histone deacetylase interacting [Glomerella graminicola M1.001]
          Length = 1480

 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 95/299 (31%), Positives = 152/299 (50%), Gaps = 16/299 (5%)

Query: 490 DKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSED 548
           D   A P  ++ LSNC    PSYRLLPK   +   S R EL   VLND W S  T  SED
Sbjct: 704 DNRPAPPSGKVSLSNCRGYGPSYRLLPKRERLKPCSGRDELCNSVLNDDWASHPTWASED 763

Query: 549 YSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTI----KTDGP 604
             F   RKN +EE L R E++R + D  +E+     + +E + ++I+  +         P
Sbjct: 764 SGFVAHRKNGFEEGLHRIEEERHDYDFNIEANLKCIQLLEPVAQQISVMSPLEREHFQMP 823

Query: 605 IRVEDHFTALNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFN 664
             +  H T++  R  +++YGD G +V++ L  N    +P++LTR+KQK EEW   + ++ 
Sbjct: 824 QALAGHSTSVFKRVCKKIYGDKGPEVVNDLFTNPLNVVPIVLTRMKQKDEEWRFSQREWE 883

Query: 665 KVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGN 724
           KVW       + KSLDH     KQ D ++L AK L   IK  +E++R++  +        
Sbjct: 884 KVWHAQVEHMHLKSLDHMGILVKQNDKRTLSAKHLVDVIKTKAEEQRRQRSLK---GKAP 940

Query: 725 RRSIVPHLEFEYSDPDIHEDLYQLI---KYSCGEMCTTEQLDKVMKIWTTFLEPMLGVP 780
           R  +V    +++SD  +  +L +L+     S G+    E+ +++   + TF+     +P
Sbjct: 941 RHQLV----WDFSDKKVVVELLRLMMLYTVSSGQHSVPEK-ERISDFFETFIPAFFDIP 994



 Score = 97.4 bits (241), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 45/75 (60%), Positives = 53/75 (70%)

Query: 40  AQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRD 99
            Q+   NDAL YL  VK  F D+ + Y+ FL++MKDFK+Q IDT GVI RV ELF GH +
Sbjct: 205 GQQPILNDALTYLDQVKVQFHDQPDVYNRFLDIMKDFKSQAIDTPGVINRVSELFAGHPN 264

Query: 100 LILGFNTFLPKGYEI 114
           LI GFNTFLP GY I
Sbjct: 265 LIQGFNTFLPPGYRI 279



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 40/74 (54%), Positives = 52/74 (70%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           + PVEF  AI++VNKIK RFQ    +YK FL+IL  Y++E K I +VY +V  LF   PD
Sbjct: 433 RGPVEFNHAISYVNKIKNRFQDKPEIYKQFLEILQTYQREQKPIQDVYAQVTTLFHTAPD 492

Query: 186 LLEEFTHFLPDSSG 199
           LLE+F  FLP+S+G
Sbjct: 493 LLEDFKQFLPESAG 506



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 39/65 (60%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFN 105
           N A++Y+  +K+ FQDK E Y  FLE+++ ++ ++     V A+V  LF    DL+  F 
Sbjct: 439 NHAISYVNKIKNRFQDKPEIYKQFLEILQTYQREQKPIQDVYAQVTTLFHTAPDLLEDFK 498

Query: 106 TFLPK 110
            FLP+
Sbjct: 499 QFLPE 503



 Score = 49.3 bits (116), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 21/70 (30%), Positives = 39/70 (55%), Gaps = 1/70 (1%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           ++P+   +A+ +++++K +F     VY  FLDI+  ++ +      V   V  LF  HP+
Sbjct: 206 QQPI-LNDALTYLDQVKVQFHDQPDVYNRFLDIMKDFKSQAIDTPGVINRVSELFAGHPN 264

Query: 186 LLEEFTHFLP 195
           L++ F  FLP
Sbjct: 265 LIQGFNTFLP 274


>gi|149036193|gb|EDL90859.1| rCG38713, isoform CRA_a [Rattus norvegicus]
          Length = 348

 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 87/211 (41%), Positives = 108/211 (51%), Gaps = 46/211 (21%)

Query: 33  GGGGGGGAQKLTTN--DALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARV 90
           G  G GG +KL  +  DAL YL  VK  F      Y+ FLE+MK+FK+Q IDT GVI RV
Sbjct: 20  GRSGSGGHEKLPVHVEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRV 79

Query: 91  KELFKGHRDLILGFNTFLPKGYEITLPL-------------------------------- 118
            +LF  H DLI+GFN FLP GY I +P                                 
Sbjct: 80  SQLFHEHPDLIVGFNAFLPLGYRIDIPKNGKLNIQSPLSNQDNSHSHGDCGEDFKQMSYK 139

Query: 119 ED--EQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKE----------N 166
           ED  + P     VEF  AI++VNKIKTRF     +Y+SFL+IL+ Y+KE           
Sbjct: 140 EDRGQVPLESDSVEFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLHTKGRPFRG 199

Query: 167 KSITEVYQEVEALFQDHPDLLEEFTHFLPDS 197
            S  EV+ EV  LF+   DLL EF  FLP++
Sbjct: 200 MSEEEVFTEVANLFRGQEDLLSEFGQFLPEA 230


>gi|336388313|gb|EGO29457.1| hypothetical protein SERLADRAFT_445278 [Serpula lacrymans var.
           lacrymans S7.9]
          Length = 1154

 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 80/204 (39%), Positives = 126/204 (61%), Gaps = 16/204 (7%)

Query: 512 YRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMRKNQYEESLFRCEDDR 570
           YR LP +    S + R E+   VLND+WVS  T  SED  F   +KN YEE+L R E++R
Sbjct: 466 YRKLPDHEANVSCTGRDEMCKSVLNDYWVSHPTWTSEDSGFIAHKKNIYEEALHRSEEER 525

Query: 571 FELDMLLESVNVTTKRVEELLEKINNNTIKTDGP-----IRVEDHF----TALNLRCIER 621
            E D  +E++     R   +LE INN  I T  P      +++ +      +++ R I++
Sbjct: 526 HEYDFHIEAI----VRTISMLEPINNK-IATLSPEDRPNFKLKPNLGGSGKSIHQRVIKK 580

Query: 622 LYG-DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLD 680
           +YG + G +V+  ++ + ++A+PV+L RLKQK+EEW R + ++NKVW E+ ++NYHKSLD
Sbjct: 581 IYGREAGAEVIQSMQDSPAVAIPVVLMRLKQKEEEWKRAQREWNKVWREVDARNYHKSLD 640

Query: 681 HRSFYFKQQDSKSLGAKALSAEIK 704
           H++  FK  D K++  KAL ++I+
Sbjct: 641 HQAITFKASDKKAITTKALVSQIE 664



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 43/72 (59%), Positives = 51/72 (70%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
           L   DAL+YL AVK  F D+ + Y+ FL++MKDFK++ IDT GVI RV  LF GH  LI 
Sbjct: 32  LNVTDALSYLDAVKMQFHDQPDVYNHFLDIMKDFKSELIDTPGVIKRVSYLFNGHPALIQ 91

Query: 103 GFNTFLPKGYEI 114
           GFNTFLP GY I
Sbjct: 92  GFNTFLPVGYRI 103



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 10/92 (10%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI--TEVYQEVEALFQDHPDL 186
           +  E A+ +V KIK R   D+  Y+ FL+IL  Y  ++ +I   EV  E+  LF+D PDL
Sbjct: 194 ITIEPAVQYVQKIKQR--CDEATYRQFLEILGRYHNKSDAIDEREVSAEIAKLFKDAPDL 251

Query: 187 LEEFTHFLPDSSGAA------SIHYVPSGRNS 212
             +F  F+P+ S         S   +P GR++
Sbjct: 252 RSDFRIFMPEKSQQLFDEIEESYSALPPGRHT 283



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 39/72 (54%)

Query: 124 PPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDH 183
           P  +P+   +A+++++ +K +F     VY  FLDI+  ++ E      V + V  LF  H
Sbjct: 27  PLDRPLNVTDALSYLDAVKMQFHDQPDVYNHFLDIMKDFKSELIDTPGVIKRVSYLFNGH 86

Query: 184 PDLLEEFTHFLP 195
           P L++ F  FLP
Sbjct: 87  PALIQGFNTFLP 98


>gi|390604463|gb|EIN13854.1| hypothetical protein PUNSTDRAFT_110022 [Punctularia strigosozonata
           HHB-11173 SS5]
          Length = 1197

 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 85/245 (34%), Positives = 134/245 (54%), Gaps = 12/245 (4%)

Query: 510 PSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMRKNQYEESLFRCED 568
           PSYR LP++ +  + S R EL   VLND WVS  T  SE+  F   +KN +EE + RCE+
Sbjct: 585 PSYRRLPESEIYLACSARDELARSVLNDVWVSHPTWQSEEQGFMTHKKNSFEELIHRCEE 644

Query: 569 DRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFTA----LNLRCIERLYG 624
           +R E  + L+++  T   +E L  +I   T +     R++         L  R I+R+Y 
Sbjct: 645 ERHEFSVHLQAMQRTIAVLEPLASRIETMTAEERASFRLQPDLGGSGRCLYERTIKRVYT 704

Query: 625 -DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRS 683
            +   +++  L+   ++A+PV+L RL+QK EEW R + ++N+ W E+  KN++KS+DH+ 
Sbjct: 705 RETAEEILQALQDAPAVAVPVVLRRLRQKDEEWRRVQREWNRNWREVDHKNFYKSIDHQG 764

Query: 684 FYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHE 743
              KQ D KS+ AKA   EI+ + +  R+ED           R   PHL ++ SD  +  
Sbjct: 765 INSKQVDKKSITAKAFVIEIETV-KTAREEDSRRFG-----GRDASPHLTYDLSDMSVLH 818

Query: 744 DLYQL 748
           D  +L
Sbjct: 819 DTLKL 823



 Score =  101 bits (251), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 48/90 (53%), Positives = 59/90 (65%)

Query: 25  PSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTA 84
           P  Q+        GG + L   DAL YL AVK+ FQD+ + Y+ FL++MKDFK+Q IDT 
Sbjct: 23  PPAQSDAPANTSPGGNRPLNVTDALGYLDAVKNEFQDRPDVYNRFLDIMKDFKSQNIDTP 82

Query: 85  GVIARVKELFKGHRDLILGFNTFLPKGYEI 114
           GVI RV  LF+G+  LI GFNTFLP GY I
Sbjct: 83  GVIERVSRLFQGNALLIQGFNTFLPHGYRI 112



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 86/293 (29%), Positives = 136/293 (46%), Gaps = 52/293 (17%)

Query: 130 EFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI--TEVYQEVEALFQDHPDLL 187
           EF  AI+++NKIKTRF  D + YK FL+IL  Y+KE K +  ++VY +V+ LF+D PDLL
Sbjct: 289 EFNHAISYLNKIKTRFSDDPNTYKQFLEILQTYQKEQKHLQDSQVYAQVQMLFKDAPDLL 348

Query: 188 EEFTHFLPDSSGAAS----IHYVPSGRNSILRDRSSAMPTARQVHVDKKERAMASHADRD 243
           EEF +FLP  +GA+     +  +P      +   +S       V  ++K    AS + R 
Sbjct: 349 EEFKNFLPTENGASGAGGLVGILPHPPGGSIVGPASGWTGDAPVQANEK----ASTSAR- 403

Query: 244 LSVDRPDPDHDRVLLKSDKDQRRRGEKE-----RERRDDHRRERERDDRDFENDVNRDFS 298
                             K ++R  EKE       R+ ++R ++ +     E D      
Sbjct: 404 ---------------APAKRRKRAAEKEPTPVPPARQANNRSKKAKLAHRAEADSPNYSP 448

Query: 299 MQRFPHKRKSARKIEDSTAEPLHQGGEGDENFGMHPVSSSYDDKNAMKSMFSQ-ELSFCE 357
            Q  P  + +  ++          G  G ++    P        +A   M +  EL F +
Sbjct: 449 FQTHPSPQMANAQLP---------GAPGMQHM---PSGHLLVHSSAGYGMTTPDELMFFD 496

Query: 358 KVKDKL--RDDYQEFLRCLHLYTKEII------TRSELQSLVGDLLGRYPDLM 402
           + K  L  R+ Y+EFL+ L L++K+II       R+E+    GDLL  + +LM
Sbjct: 497 RAKKALDTREAYEEFLKLLGLFSKDIIDARTLVERAEVFLGDGDLLVEFKELM 549



 Score = 49.3 bits (116), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 38/69 (55%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDL 186
           +P+   +A+ +++ +K  FQ    VY  FLDI+  ++ +N     V + V  LFQ +  L
Sbjct: 39  RPLNVTDALGYLDAVKNEFQDRPDVYNRFLDIMKDFKSQNIDTPGVIERVSRLFQGNALL 98

Query: 187 LEEFTHFLP 195
           ++ F  FLP
Sbjct: 99  IQGFNTFLP 107



 Score = 46.2 bits (108), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 2/66 (3%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQR--IDTAGVIARVKELFKGHRDLILG 103
           N A++YL  +K  F D    Y  FLE+++ ++ ++  +  + V A+V+ LFK   DL+  
Sbjct: 291 NHAISYLNKIKTRFSDDPNTYKQFLEILQTYQKEQKHLQDSQVYAQVQMLFKDAPDLLEE 350

Query: 104 FNTFLP 109
           F  FLP
Sbjct: 351 FKNFLP 356



 Score = 40.4 bits (93), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 6/84 (7%)

Query: 25  PSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTA 84
           PSG   V    G G    +TT D L +    K    D RE Y++FL+++  F    ID  
Sbjct: 472 PSGHLLVHSSAGYG----MTTPDELMFFDRAKKAL-DTREAYEEFLKLLGLFSKDIIDAR 526

Query: 85  GVIARVKELFKGHRDLILGFNTFL 108
            ++ R  E+F G  DL++ F   +
Sbjct: 527 TLVERA-EVFLGDGDLLVEFKELM 549


>gi|357128323|ref|XP_003565823.1| PREDICTED: paired amphipathic helix protein Sin3-like 6-like
           [Brachypodium distachyon]
          Length = 760

 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 93/298 (31%), Positives = 146/298 (48%), Gaps = 51/298 (17%)

Query: 501 DLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDY----------- 549
           D++NC+R T SY LLP N +   +S +TELG  + ND  V  TSGSE             
Sbjct: 292 DITNCKRYTRSYYLLPDNCITLQSSYQTELGRSIFNDCLVCSTSGSERSDGSKCKTKNES 351

Query: 550 --------SFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKT 601
                   S K   +N++E ++  CE++ FE DMLL   + T   +  L + ++ +    
Sbjct: 352 SAGCEESDSCKPKIENKFESTISACEEEMFESDMLLHWFSETADFISNLQQHVDRD---- 407

Query: 602 DGPIRVEDHFTALNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRS 661
              +++ +H + L+ +CI++LY D       +  KN S AL V+L+RL QK E+ +  R 
Sbjct: 408 ---LKINEHLSPLHRKCIQKLYNDDYDHYCLLESKNTSAALAVLLSRLNQKVEDLSEARL 464

Query: 662 DFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIA 721
             +K  +++ +KNY+KSLDH    FK  D+K +  KAL  E KEI++ +    D      
Sbjct: 465 CLHKTRSQVIAKNYYKSLDHHGPSFKILDTKRMSQKALLVEAKEINKTRLNVAD------ 518

Query: 722 AGNRRSIVPHLEFEYSDPDIHEDLYQLIKYSCGEMCTTEQLDKVMKIWTTFLEPMLGV 779
                        EY++P +HED+  +I  +C         +K M  WT  + P L  
Sbjct: 519 -------------EYANPVMHEDISSIISSACASD------EKQMMTWTKLVHPFLSA 557



 Score = 53.1 bits (126), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 37/151 (24%), Positives = 71/151 (47%), Gaps = 22/151 (14%)

Query: 63  REKYDDFLEVMKDFKAQRIDTAGVI---------ARVKELFKGHRDLILGFNTFLPKGYE 113
           R+ YD+F++ M +   + +D  G I           V ELF+G  +++ GF  +  +G+ 
Sbjct: 75  RDVYDEFVKTMTEIWKRSVDPDGEIRNISVESYKETVMELFQGQPEVMQGF-IYFTQGHS 133

Query: 114 ITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSIT--E 171
              P +D        +  E  ++F+ ++K      +  Y + +  L  YRK+  ++T  +
Sbjct: 134 ---PFKDNA------IRMENPLDFIQRLKRNPDITNEEYAAIIKTLLAYRKQGGTMTVAD 184

Query: 172 VYQEVEALFQDHPDLLEEFTH-FLPDSSGAA 201
           V+  V+    + P+LL+EF   +LP     A
Sbjct: 185 VFHNVKKCLSNCPELLDEFIKVYLPPRPNVA 215


>gi|296233210|ref|XP_002761917.1| PREDICTED: paired amphipathic helix protein Sin3b [Callithrix
           jacchus]
          Length = 350

 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 98/270 (36%), Positives = 132/270 (48%), Gaps = 56/270 (20%)

Query: 33  GGGGGGGAQKLTTN--DALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARV 90
           G  G  G +KL  +  DAL YL  VK  F      Y+ FLE+MK+FK+Q IDT GVI RV
Sbjct: 24  GRSGSAGHEKLPVHVEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRV 83

Query: 91  KELFKGHRDLILGFNTFLPKGYEITLP-----------------------LED--EQPP- 124
            +LF  H DLI+GFN FLP GY I +P                        ED  +Q P 
Sbjct: 84  SQLFHEHPDLIVGFNAFLPLGYRIDIPKNGKLNIQSPLTCQENSHNHGDCAEDFKQQVPY 143

Query: 125 ----PKKP-----VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKE---------- 165
               P+ P     VEF  AI++VNKIKTRF     +Y+SFL+IL+ Y+KE          
Sbjct: 144 KEDKPQVPLESDSVEFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLNTRGRPFR 203

Query: 166 NKSITEVYQEVEALFQDHPDLLEEFTHFLPDS-------SGAASIHYVPSGRN--SILRD 216
             S  EV+ EV  LF+   DLL EF  FLP++       +G   +H V    +  ++   
Sbjct: 204 GMSEEEVFTEVANLFRGQEDLLSEFGQFLPEAKRSLFTGNGPCEMHSVQKSEHDKTLEHS 263

Query: 217 RSSAMPTARQVHVDKKERAMASHADRDLSV 246
           R  + P+  +      ++ M     +DLS+
Sbjct: 264 RKRSRPSLLRPVSAPAKKKMKLRGTKDLSI 293



 Score = 44.3 bits (103), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 21/48 (43%), Positives = 31/48 (64%), Gaps = 2/48 (4%)

Query: 351 QELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLG 396
           QE SF +KV+  L+    Y+ FLRC+ L+ +E+++ SEL  LV   LG
Sbjct: 303 QEFSFFDKVRRVLKSQEVYENFLRCIALFNQELVSGSELLQLVSPFLG 350


>gi|409075276|gb|EKM75658.1| hypothetical protein AGABI1DRAFT_46078 [Agaricus bisporus var.
            burnettii JB137-S8]
          Length = 1630

 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 79/206 (38%), Positives = 123/206 (59%), Gaps = 6/206 (2%)

Query: 511  SYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMRKNQYEESLFRCEDD 569
            SYR L  +      + R E+   VLND WVS  T  SED  F   +KN YEE+L R E++
Sbjct: 881  SYRRLSASEANVLCTGRDEMCRSVLNDEWVSHPTWSSEDSGFISHKKNIYEEALHRSEEE 940

Query: 570  RFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDH----FTALNLRCIERLYG- 624
            R E D  +E++  T   +E L  KI   + +     +++ H    +  ++ R I+++YG 
Sbjct: 941  RHEYDFHIEAITRTISLLEPLHHKIAQLSAEDRANFKLKPHIGGSWKPIHTRVIKKIYGR 1000

Query: 625  DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSF 684
            D GL+V+  ++ +  LA+PV+L RLKQK++EW R + ++NKVW E+ ++NY KSLDH+S 
Sbjct: 1001 DLGLEVISSMQDSPVLAIPVVLKRLKQKEDEWKRSQREWNKVWREVDARNYTKSLDHQSI 1060

Query: 685  YFKQQDSKSLGAKALSAEIKEISEKK 710
             FK  D K++  KAL  +I+   E++
Sbjct: 1061 IFKTMDKKAITTKALVNQIEGAREEQ 1086



 Score =  123 bits (308), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 73/184 (39%), Positives = 99/184 (53%), Gaps = 30/184 (16%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
           L   DAL+YL AVK  F D+ + Y+ FL++MK+FK + IDT GVI RV +LF GH  LI 
Sbjct: 494 LNVTDALSYLDAVKIQFHDQPDVYNQFLDIMKEFKNELIDTPGVIKRVSQLFNGHSALIQ 553

Query: 103 GFNTFLPKGYEI-------------------TLPLEDEQPPPKKPV-------EFEEAIN 136
           GFNTFLP GY I                   T+       P + P+         E A+ 
Sbjct: 554 GFNTFLPVGYRIECSTDANDSSYITVTTPTGTMMQTTNNGPGRGPIFGTYDGRAIEPAVQ 613

Query: 137 FVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI--TEVYQEVEALFQDHPDLLEEFTHFL 194
           +V KIK R   D   Y+ FLDIL+ Y  + ++I   EV +++  LF+D PDL  +F  F+
Sbjct: 614 YVQKIKNR--CDPETYRQFLDILSRYHHKPETIDEEEVSRQIARLFKDAPDLRADFRVFM 671

Query: 195 PDSS 198
           P+ S
Sbjct: 672 PEQS 675



 Score = 48.9 bits (115), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 37/69 (53%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDL 186
           +P+   +A+++++ +K +F     VY  FLDI+  ++ E      V + V  LF  H  L
Sbjct: 492 RPLNVTDALSYLDAVKIQFHDQPDVYNQFLDIMKEFKNELIDTPGVIKRVSQLFNGHSAL 551

Query: 187 LEEFTHFLP 195
           ++ F  FLP
Sbjct: 552 IQGFNTFLP 560


>gi|380482570|emb|CCF41160.1| histone deacetylase interacting [Colletotrichum higginsianum]
          Length = 1461

 Score =  137 bits (345), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 95/299 (31%), Positives = 152/299 (50%), Gaps = 16/299 (5%)

Query: 490 DKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSED 548
           D   A P  ++ LSNC    PSYRLLPK   +   S R EL   VLND W S  T  SED
Sbjct: 685 DNRPAPPSGKVSLSNCRGYGPSYRLLPKRERLKPCSGRDELCNSVLNDDWASHPTWASED 744

Query: 549 YSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTI----KTDGP 604
             F   RKN +EE L R E++R + D  +E+     + +E + ++I+  +         P
Sbjct: 745 SGFVAHRKNGFEEGLHRIEEERHDYDFNIEANLKCIQLLEPVAQQISVMSPLEREHFQMP 804

Query: 605 IRVEDHFTALNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFN 664
             +  H T++  R  +++YGD G +V++ L  N    +P++LTR+KQK EEW   + ++ 
Sbjct: 805 QALAGHSTSVFKRVCKKIYGDKGPEVVNDLFSNPLNVVPIVLTRMKQKDEEWRFSQREWE 864

Query: 665 KVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGN 724
           KVW       + KSLDH     KQ D ++L AK L   IK  +E++R++  +        
Sbjct: 865 KVWHAQVEHMHLKSLDHMGILVKQNDKRNLSAKHLVDVIKTKAEEQRRQRSLK---GKAP 921

Query: 725 RRSIVPHLEFEYSDPDIHEDLYQLI---KYSCGEMCTTEQLDKVMKIWTTFLEPMLGVP 780
           R  +V    +++SD  +  +L +L+     S G+    E+ +++   + TF+     +P
Sbjct: 922 RHQLV----WDFSDKKVVVELLRLMMLYTVSSGQHSVPEK-ERISDFFETFIPAFFDIP 975



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 40/74 (54%), Positives = 52/74 (70%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           + PVEF  AI++VNKIK RFQ    +YK FL+IL  Y++E K I +VY +V  LF   PD
Sbjct: 414 RGPVEFNHAISYVNKIKNRFQDKPEIYKQFLEILQTYQREQKPIQDVYAQVTTLFHTAPD 473

Query: 186 LLEEFTHFLPDSSG 199
           LLE+F  FLP+S+G
Sbjct: 474 LLEDFKQFLPESAG 487



 Score = 84.7 bits (208), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 38/60 (63%), Positives = 45/60 (75%)

Query: 55  VKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEI 114
           VK  F D+ + Y+ FL++MKDFK+Q IDT GVI RV ELF GH +LI GFNTFLP GY I
Sbjct: 203 VKVQFHDQPDVYNRFLDIMKDFKSQAIDTPGVINRVSELFAGHPNLIQGFNTFLPPGYRI 262



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 39/65 (60%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFN 105
           N A++Y+  +K+ FQDK E Y  FLE+++ ++ ++     V A+V  LF    DL+  F 
Sbjct: 420 NHAISYVNKIKNRFQDKPEIYKQFLEILQTYQREQKPIQDVYAQVTTLFHTAPDLLEDFK 479

Query: 106 TFLPK 110
            FLP+
Sbjct: 480 QFLPE 484



 Score = 46.6 bits (109), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 34/71 (47%)

Query: 125 PKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHP 184
           P  P + E      N++K +F     VY  FLDI+  ++ +      V   V  LF  HP
Sbjct: 187 PTAPKQCEFHQTARNQVKVQFHDQPDVYNRFLDIMKDFKSQAIDTPGVINRVSELFAGHP 246

Query: 185 DLLEEFTHFLP 195
           +L++ F  FLP
Sbjct: 247 NLIQGFNTFLP 257


>gi|429849994|gb|ELA25315.1| transcriptional repressor sin3p [Colletotrichum gloeosporioides Nara
            gc5]
          Length = 1520

 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 94/299 (31%), Positives = 153/299 (51%), Gaps = 16/299 (5%)

Query: 490  DKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSED 548
            D   A P  ++ LSNC    PSYRLLPK   +   S R EL   VLND W S  T  SED
Sbjct: 744  DNRPAPPSGKVSLSNCRGYGPSYRLLPKRERLKPCSGRDELCNSVLNDDWASHPTWASED 803

Query: 549  YSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTI----KTDGP 604
              F   RKN +EE L R E++R + D  +E+     + +E + ++I+  +         P
Sbjct: 804  SGFVAHRKNGFEEGLHRIEEERHDYDFNIEANLKCIQLLEPVAQQISVMSPVEREHFQMP 863

Query: 605  IRVEDHFTALNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFN 664
              +  H T++  R  +++YGD G +V++ L  N    +P++LTR+KQK EEW   + ++ 
Sbjct: 864  QALAGHSTSVFKRVCKKIYGDKGPEVVNDLFSNPLNVVPIVLTRMKQKDEEWRFSQREWE 923

Query: 665  KVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGN 724
            KVW       + KSLDH     KQ D ++L AK L   IK  +E+++++  +        
Sbjct: 924  KVWHAQVENMHLKSLDHMGILVKQNDKRNLSAKHLVDVIKTKAEEQKRQRSLK---GKAP 980

Query: 725  RRSIVPHLEFEYSDPDIHEDLYQLI---KYSCGEMCTTEQLDKVMKIWTTFLEPMLGVP 780
            R  +V    +++SD  +  +L +L+     S G+    E+ +++ + + TF+     +P
Sbjct: 981  RHQLV----WDFSDKKVVIELLRLMMLYTVSSGQHSVPEK-ERITEFFETFIPAFFDIP 1034



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 47/90 (52%), Positives = 55/90 (61%)

Query: 25  PSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTA 84
           P     VV  G        +  DAL YL  VK  F D+ + Y+ FL++MKDFK+Q IDT 
Sbjct: 241 PRVHIPVVAQGLAPRLGSYSAFDALTYLDQVKVQFHDQPDVYNRFLDIMKDFKSQAIDTP 300

Query: 85  GVIARVKELFKGHRDLILGFNTFLPKGYEI 114
           GVI RV ELF GH +LI GFNTFLP GY I
Sbjct: 301 GVINRVSELFAGHPNLIQGFNTFLPPGYRI 330



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 36/76 (47%), Positives = 48/76 (63%), Gaps = 5/76 (6%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           + PVEF  AI++      RFQ    +YK FL+IL  Y++E K I +VY +V  LF   PD
Sbjct: 479 RGPVEFNHAISY-----NRFQDKPEIYKQFLEILQTYQREQKPIQDVYAQVTTLFHTAPD 533

Query: 186 LLEEFTHFLPDSSGAA 201
           LLE+F  FLP+S+G A
Sbjct: 534 LLEDFKQFLPESAGQA 549



 Score = 49.3 bits (116), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 35/63 (55%)

Query: 133 EAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTH 192
           +A+ +++++K +F     VY  FLDI+  ++ +      V   V  LF  HP+L++ F  
Sbjct: 263 DALTYLDQVKVQFHDQPDVYNRFLDIMKDFKSQAIDTPGVINRVSELFAGHPNLIQGFNT 322

Query: 193 FLP 195
           FLP
Sbjct: 323 FLP 325



 Score = 43.5 bits (101), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 9/87 (10%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFN 105
           N A++Y +     FQDK E Y  FLE+++ ++ ++     V A+V  LF    DL+  F 
Sbjct: 485 NHAISYNR-----FQDKPEIYKQFLEILQTYQREQKPIQDVYAQVTTLFHTAPDLLEDFK 539

Query: 106 TFLPK--GYEITLPLE--DEQPPPKKP 128
            FLP+  G     P    +EQPP   P
Sbjct: 540 QFLPESAGQAKGTPGRPGEEQPPGPGP 566


>gi|18088150|gb|AAH21160.1| Sin3b protein [Mus musculus]
 gi|148678866|gb|EDL10813.1| transcriptional regulator, SIN3B (yeast), isoform CRA_a [Mus
           musculus]
          Length = 302

 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 87/211 (41%), Positives = 108/211 (51%), Gaps = 46/211 (21%)

Query: 33  GGGGGGGAQKLTTN--DALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARV 90
           G  G GG +KL  +  DAL YL  VK  F      Y+ FLE+MK+FK+Q IDT GVI RV
Sbjct: 20  GRSGSGGHEKLPVHVEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRV 79

Query: 91  KELFKGHRDLILGFNTFLPKGYEITLPL-------------------------------- 118
            +LF  H DLI+GFN FLP GY I +P                                 
Sbjct: 80  SQLFHEHPDLIVGFNAFLPLGYRIDIPKNGKLNIQSPLSSQDNSHSHGDCGEDFKQMSYK 139

Query: 119 ED--EQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKE----------N 166
           ED  + P     VEF  AI++VNKIKTRF     +Y+SFL+IL+ Y+KE           
Sbjct: 140 EDRGQVPLESDSVEFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLHTKGRPFRG 199

Query: 167 KSITEVYQEVEALFQDHPDLLEEFTHFLPDS 197
            S  EV+ EV  LF+   DLL EF  FLP++
Sbjct: 200 MSEEEVFTEVANLFRGQEDLLSEFGQFLPEA 230


>gi|336364133|gb|EGN92496.1| hypothetical protein SERLA73DRAFT_117204 [Serpula lacrymans var.
           lacrymans S7.3]
          Length = 1134

 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 80/204 (39%), Positives = 126/204 (61%), Gaps = 16/204 (7%)

Query: 512 YRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMRKNQYEESLFRCEDDR 570
           YR LP +    S + R E+   VLND+WVS  T  SED  F   +KN YEE+L R E++R
Sbjct: 446 YRKLPDHEANVSCTGRDEMCKSVLNDYWVSHPTWTSEDSGFIAHKKNIYEEALHRSEEER 505

Query: 571 FELDMLLESVNVTTKRVEELLEKINNNTIKTDGP-----IRVEDHF----TALNLRCIER 621
            E D  +E++     R   +LE INN  I T  P      +++ +      +++ R I++
Sbjct: 506 HEYDFHIEAI----VRTISMLEPINNK-IATLSPEDRPNFKLKPNLGGSGKSIHQRVIKK 560

Query: 622 LYG-DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLD 680
           +YG + G +V+  ++ + ++A+PV+L RLKQK+EEW R + ++NKVW E+ ++NYHKSLD
Sbjct: 561 IYGREAGAEVIQSMQDSPAVAIPVVLMRLKQKEEEWKRAQREWNKVWREVDARNYHKSLD 620

Query: 681 HRSFYFKQQDSKSLGAKALSAEIK 704
           H++  FK  D K++  KAL ++I+
Sbjct: 621 HQAITFKASDKKAITTKALVSQIE 644



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 80/210 (38%), Positives = 105/210 (50%), Gaps = 42/210 (20%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
           L   DAL+YL AVK  F D+ + Y+ FL++MKDFK++ IDT GVI RV  LF GH  LI 
Sbjct: 32  LNVTDALSYLDAVKMQFHDQPDVYNHFLDIMKDFKSELIDTPGVIKRVSYLFNGHPALIQ 91

Query: 103 GFNTFLPKGYEI--------------TLP-----------------LEDEQPP-PKKPVE 130
           GFNTFLP GY I              T P                 L    P  P   + 
Sbjct: 92  GFNTFLPVGYRIECSTDPQDANYITVTTPSGTMMQSTNDGPGKGNLLWSTFPSLPSNGIT 151

Query: 131 FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI--TEVYQEVEALFQDHPDLLE 188
            E A+ +V KIK R   D+  Y+ FL+IL  Y  ++ +I   EV  E+  LF+D PDL  
Sbjct: 152 IEPAVQYVQKIKQR--CDEATYRQFLEILGRYHNKSDAIDEREVSAEIAKLFKDAPDLRS 209

Query: 189 EFTHFLPDSSGAA------SIHYVPSGRNS 212
           +F  F+P+ S         S   +P GR++
Sbjct: 210 DFRIFMPEKSQQLFDEIEESYSALPPGRHT 239



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 39/72 (54%)

Query: 124 PPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDH 183
           P  +P+   +A+++++ +K +F     VY  FLDI+  ++ E      V + V  LF  H
Sbjct: 27  PLDRPLNVTDALSYLDAVKMQFHDQPDVYNHFLDIMKDFKSELIDTPGVIKRVSYLFNGH 86

Query: 184 PDLLEEFTHFLP 195
           P L++ F  FLP
Sbjct: 87  PALIQGFNTFLP 98


>gi|426194691|gb|EKV44622.1| hypothetical protein AGABI2DRAFT_74621 [Agaricus bisporus var.
           bisporus H97]
          Length = 1190

 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 79/206 (38%), Positives = 123/206 (59%), Gaps = 6/206 (2%)

Query: 511 SYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMRKNQYEESLFRCEDD 569
           SYR L  +      + R E+   VLND WVS  T  SED  F   +KN YEE+L R E++
Sbjct: 441 SYRRLSASEANVLCTGRDEMCRSVLNDEWVSHPTWSSEDSGFISHKKNIYEEALHRSEEE 500

Query: 570 RFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDH----FTALNLRCIERLYG- 624
           R E D  +E++  T   +E L  KI   + +     +++ H    +  ++ R I+++YG 
Sbjct: 501 RHEYDFHIEAITRTISLLEPLHHKIAQLSAEDRANFKLKPHIGGSWKPIHTRVIKKIYGR 560

Query: 625 DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSF 684
           D GL+V+  ++ +  LA+PV+L RLKQK++EW R + ++NKVW E+ ++NY KSLDH+S 
Sbjct: 561 DLGLEVISSMQDSPVLAIPVVLKRLKQKEDEWKRSQREWNKVWREVDARNYTKSLDHQSI 620

Query: 685 YFKQQDSKSLGAKALSAEIKEISEKK 710
            FK  D K++  KAL  +I+   E++
Sbjct: 621 IFKTMDKKAITTKALVNQIEGAREEQ 646



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 73/206 (35%), Positives = 99/206 (48%), Gaps = 52/206 (25%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
           L   DAL+YL AVK  F D+ + Y+ FL++MK+FK + IDT GVI RV +LF GH  LI 
Sbjct: 27  LNVTDALSYLDAVKIQFHDQPDVYNQFLDIMKEFKNELIDTPGVIKRVSQLFNGHSALIQ 86

Query: 103 GFNTFLPKGYEI-------------------TLPLEDEQPPPKKPV-------------- 129
           GFNTFLP GY I                   T+       P + P+              
Sbjct: 87  GFNTFLPVGYRIECSTDANDSSYITVTTPTGTMMQTTNNGPGRGPILWSMGPVPGPAIRA 146

Query: 130 ---------------EFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI--TEV 172
                            E A+ +V KIK R   D   Y+ FLDIL+ Y  + ++I   EV
Sbjct: 147 IRPPSPEASGTYDGRAIEPAVQYVQKIKNR--CDPETYRQFLDILSRYHHKPETIDEEEV 204

Query: 173 YQEVEALFQDHPDLLEEFTHFLPDSS 198
            +++  LF+D PDL  +F  F+P+ S
Sbjct: 205 SRQIARLFKDAPDLRADFRVFMPEQS 230



 Score = 48.1 bits (113), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 37/69 (53%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDL 186
           +P+   +A+++++ +K +F     VY  FLDI+  ++ E      V + V  LF  H  L
Sbjct: 25  RPLNVTDALSYLDAVKIQFHDQPDVYNQFLDIMKEFKNELIDTPGVIKRVSQLFNGHSAL 84

Query: 187 LEEFTHFLP 195
           ++ F  FLP
Sbjct: 85  IQGFNTFLP 93


>gi|322703909|gb|EFY95510.1| putative transcription regulatory protein [Metarhizium anisopliae
            ARSEF 23]
          Length = 1448

 Score =  137 bits (344), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 104/335 (31%), Positives = 163/335 (48%), Gaps = 39/335 (11%)

Query: 494  AKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFK 552
            A P ++L LSNC    PSYRLLPK   +   S R EL   VLND W S  T  SED  F 
Sbjct: 680  AAPTEKLSLSNCRGYGPSYRLLPKRERLKPCSGRDELCNSVLNDQWASHPTWASEDSGFV 739

Query: 553  HMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDG--------P 604
              RKNQ+EE L R E++R + D  +E+      +  +LLE I    +            P
Sbjct: 740  AHRKNQFEEGLHRIEEERHDYDFNIEA----NLKCIQLLEPIAQQMLAMSPAERETFHMP 795

Query: 605  IRVEDHFTALNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFN 664
              +    T++  R  +++YG+ G+DV++ +  +    +PV+L R++QK EEW   + ++ 
Sbjct: 796  AALAGQSTSIFKRITKKIYGERGIDVVNDMYSHPFDVVPVLLARMRQKDEEWRFSQREWE 855

Query: 665  KVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGN 724
            KVW       + KSLDH     K  D ++L AK L   IK   E++R+E  +        
Sbjct: 856  KVWHAQTENMHLKSLDHMGILVKSTDKRNLTAKHLVDVIKTKHEEQRRERAL-------- 907

Query: 725  RRSIVP--HLEFEYSDPDIHEDLYQLIK-YSC--GEMCTTEQLDKVMKIWTTFLEPMLGV 779
             R   P   L +++S+  +  +L +L+  YS   G+  T E+ ++++  + TF+     +
Sbjct: 908  -RGKAPRHQLVWDFSNKQVILELLRLMMLYSMHNGQHSTQEK-ERILDFFETFVPAFFDL 965

Query: 780  PS----------RP-QGAEDTEDVVKAKSHTVKSR 803
            P           +P  G +D ED   A+    +SR
Sbjct: 966  PEEMYQDKLPKMQPDSGEDDVEDSTPAELTNGRSR 1000



 Score =  106 bits (265), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 85/294 (28%), Positives = 124/294 (42%), Gaps = 48/294 (16%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           + PVEF  AI++VNKIK RFQ    +YK FL+IL  Y++E K I +VY +V  LF   PD
Sbjct: 413 RGPVEFNHAISYVNKIKNRFQDKPEIYKQFLEILQTYQREQKPIQDVYAQVTTLFNAAPD 472

Query: 186 LLEEFTHFLPDSSGAASI------HYVPSGRNSILRDRSSAMPTARQVHVDKKERAMASH 239
           LLE+F  FLP+S+G A           P+G +   +     MP             + S 
Sbjct: 473 LLEDFKQFLPESAGQAKATPGRADESAPTGSSQTPQPGGQKMP------------PLGSF 520

Query: 240 ADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERRDDHRRERERDDRDFENDV-NRDFS 298
           A        P P   +     D  +R R EK+     +            +  V N    
Sbjct: 521 A--------PPPSASK-----DNKKRPRAEKQAAAATETAPPETNATNRLQQPVVNGTGK 567

Query: 299 MQRFPHKRKSARKIEDSTAEPLHQGGEGDENFGMHPVSSSYDDKNAMKSMFSQELSFCEK 358
             +  H R +    + ST EP            + PV           +   +E++F E+
Sbjct: 568 RAKLSHARATG---DASTIEPT-----------LTPVMPEPYPPRPSATSNQEEIAFFER 613

Query: 359 VKDKL--RDDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLA 410
           VK  L  R    EFL+  +L+++ II R+ L       +G  PDLM  +  F+ 
Sbjct: 614 VKKFLSNRSSMNEFLKLCNLFSQGIIDRNTLFHKGALFIGANPDLMTFWKTFVG 667



 Score = 99.8 bits (247), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 51/92 (55%), Positives = 60/92 (65%), Gaps = 2/92 (2%)

Query: 23  GEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRID 82
           G   G  Q+ GG   G  Q+   NDAL YL  VK  F D+ + Y+ FL++MKDFK+Q ID
Sbjct: 187 GVTPGGHQIPGGITQG--QQPILNDALTYLDQVKVQFHDQPDVYNRFLDIMKDFKSQAID 244

Query: 83  TAGVIARVKELFKGHRDLILGFNTFLPKGYEI 114
           T GVI RV ELF GH +LI GFNTFLP GY I
Sbjct: 245 TPGVINRVSELFAGHPNLIQGFNTFLPPGYRI 276



 Score = 53.1 bits (126), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 39/65 (60%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFN 105
           N A++Y+  +K+ FQDK E Y  FLE+++ ++ ++     V A+V  LF    DL+  F 
Sbjct: 419 NHAISYVNKIKNRFQDKPEIYKQFLEILQTYQREQKPIQDVYAQVTTLFNAAPDLLEDFK 478

Query: 106 TFLPK 110
            FLP+
Sbjct: 479 QFLPE 483



 Score = 50.1 bits (118), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 25/87 (28%), Positives = 45/87 (51%), Gaps = 5/87 (5%)

Query: 109 PKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKS 168
           P G++I   +   Q    +P+   +A+ +++++K +F     VY  FLDI+  ++ +   
Sbjct: 190 PGGHQIPGGITQGQ----QPI-LNDALTYLDQVKVQFHDQPDVYNRFLDIMKDFKSQAID 244

Query: 169 ITEVYQEVEALFQDHPDLLEEFTHFLP 195
              V   V  LF  HP+L++ F  FLP
Sbjct: 245 TPGVINRVSELFAGHPNLIQGFNTFLP 271


>gi|354473804|ref|XP_003499122.1| PREDICTED: paired amphipathic helix protein Sin3b isoform 1
           [Cricetulus griseus]
          Length = 293

 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 87/211 (41%), Positives = 108/211 (51%), Gaps = 46/211 (21%)

Query: 33  GGGGGGGAQKLTTN--DALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARV 90
           G  G GG +KL  +  DAL YL  VK  F      Y+ FLE+MK+FK+Q IDT GVI RV
Sbjct: 20  GRSGSGGHEKLPVHVEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRV 79

Query: 91  KELFKGHRDLILGFNTFLPKGYEITLPL-------------------------------- 118
            +LF  H DLI+GFN FLP GY I +P                                 
Sbjct: 80  SQLFHEHPDLIVGFNAFLPLGYRIDIPKNGKLNIQSPLASQENSHSHGDCGEDFKQMSYK 139

Query: 119 ED--EQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKE----------N 166
           ED  + P     VEF  AI++VNKIKTRF     +Y+SFL+IL+ Y+KE           
Sbjct: 140 EDRGQVPLESDSVEFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLHTKGRPFRG 199

Query: 167 KSITEVYQEVEALFQDHPDLLEEFTHFLPDS 197
            S  EV+ EV  LF+   DLL EF  FLP++
Sbjct: 200 MSEEEVFTEVANLFRGQEDLLSEFGQFLPEA 230


>gi|322693302|gb|EFY85167.1| putative transcription regulatory protein [Metarhizium acridum CQMa
            102]
          Length = 1452

 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 104/335 (31%), Positives = 163/335 (48%), Gaps = 39/335 (11%)

Query: 494  AKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFK 552
            A P ++L LSNC    PSYRLLPK   +   S R EL   VLND W S  T  SED  F 
Sbjct: 684  APPTEKLSLSNCRGYGPSYRLLPKRERLKPCSGRDELCNSVLNDQWASHPTWASEDSGFV 743

Query: 553  HMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDG--------P 604
              RKNQ+EE L R E++R + D  +E+      +  +LLE I    +            P
Sbjct: 744  AHRKNQFEEGLHRIEEERHDYDFNIEA----NLKCIQLLEPIAQQMLAMSPAEREAFHMP 799

Query: 605  IRVEDHFTALNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFN 664
              +    T++  R  +++YG+ G+DV++ +  +    +PV+L R++QK EEW   + ++ 
Sbjct: 800  AALAGQSTSIFKRITKKIYGERGIDVVNDMYSHPFDVVPVLLARMRQKDEEWRFSQREWE 859

Query: 665  KVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGN 724
            KVW       + KSLDH     K  D ++L AK L   IK   E++R+E  +        
Sbjct: 860  KVWHAQTENMHLKSLDHMGILVKSTDKRNLTAKHLVDVIKTKHEEQRRERAL-------- 911

Query: 725  RRSIVP--HLEFEYSDPDIHEDLYQLIK-YSC--GEMCTTEQLDKVMKIWTTFLEPMLGV 779
             R   P   L +++S+  +  +L +L+  YS   G+  T E+ ++++  + TF+     +
Sbjct: 912  -RGKAPRHQLVWDFSNKQVILELLRLMMLYSMHNGQHSTQEK-ERILDFFETFVPAFFDL 969

Query: 780  PS----------RP-QGAEDTEDVVKAKSHTVKSR 803
            P           +P  G +D ED   A+    +SR
Sbjct: 970  PEEMYQDKLPKMQPDSGEDDVEDSTPAELTNGRSR 1004



 Score =  105 bits (263), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 86/297 (28%), Positives = 126/297 (42%), Gaps = 51/297 (17%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           + PVEF  AI++VNKIK RFQ    +YK FL+IL  Y++E K I +VY +V  LF   PD
Sbjct: 414 RGPVEFNHAISYVNKIKNRFQDKPEIYKQFLEILQTYQREQKPIQDVYAQVTTLFNAAPD 473

Query: 186 LLEEFTHFLPDSSGAASI------HYVPSGRNSILRDRSSAMPTARQVHVDKKERAMASH 239
           LLE+F  FLP+S+G A           P+G +   +     MP             + S 
Sbjct: 474 LLEDFKQFLPESAGQAKATPGRGDEGAPTGSSQTPQPGGQKMP------------PLGSF 521

Query: 240 ADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERRDDHRRERER----DDRDFENDVNR 295
           A        P P   +     D  +R R EK+                  +R  ++ VN 
Sbjct: 522 A--------PPPSASK-----DSKKRPRAEKQAAAAAAAAETAPPETNATNRLQQSVVNG 568

Query: 296 DFSMQRFPHKRKSARKIEDSTAEPLHQGGEGDENFGMHPVSSSYDDKNAMKSMFSQELSF 355
                +  H R +    + ST EP            + PV           +   +E++F
Sbjct: 569 TGKRAKLSHARATG---DASTIEPT-----------LTPVMPEPYPPRPSATSNQEEIAF 614

Query: 356 CEKVKDKL--RDDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLA 410
            E+VK  L  R    EFL+  +L+++ II R+ L       +G  PDLM  +  F+ 
Sbjct: 615 FERVKKFLSNRSSMNEFLKLCNLFSQGIIDRNTLFHKGALFIGASPDLMTFWKTFVG 671



 Score =  100 bits (248), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 51/92 (55%), Positives = 60/92 (65%), Gaps = 2/92 (2%)

Query: 23  GEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRID 82
           G   G  Q+ GG   G  Q+   NDAL YL  VK  F D+ + Y+ FL++MKDFK+Q ID
Sbjct: 188 GVTPGGHQIPGGITQG--QQPILNDALTYLDQVKVQFHDQPDVYNRFLDIMKDFKSQAID 245

Query: 83  TAGVIARVKELFKGHRDLILGFNTFLPKGYEI 114
           T GVI RV ELF GH +LI GFNTFLP GY I
Sbjct: 246 TPGVINRVSELFAGHPNLIQGFNTFLPPGYRI 277



 Score = 53.1 bits (126), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 39/65 (60%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFN 105
           N A++Y+  +K+ FQDK E Y  FLE+++ ++ ++     V A+V  LF    DL+  F 
Sbjct: 420 NHAISYVNKIKNRFQDKPEIYKQFLEILQTYQREQKPIQDVYAQVTTLFNAAPDLLEDFK 479

Query: 106 TFLPK 110
            FLP+
Sbjct: 480 QFLPE 484



 Score = 49.7 bits (117), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 25/87 (28%), Positives = 45/87 (51%), Gaps = 5/87 (5%)

Query: 109 PKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKS 168
           P G++I   +   Q    +P+   +A+ +++++K +F     VY  FLDI+  ++ +   
Sbjct: 191 PGGHQIPGGITQGQ----QPI-LNDALTYLDQVKVQFHDQPDVYNRFLDIMKDFKSQAID 245

Query: 169 ITEVYQEVEALFQDHPDLLEEFTHFLP 195
              V   V  LF  HP+L++ F  FLP
Sbjct: 246 TPGVINRVSELFAGHPNLIQGFNTFLP 272


>gi|164420772|ref|NP_001106719.1| paired amphipathic helix protein Sin3b isoform 2 [Mus musculus]
 gi|18043296|gb|AAH20049.1| Sin3b protein [Mus musculus]
 gi|74147121|dbj|BAE27478.1| unnamed protein product [Mus musculus]
 gi|74151656|dbj|BAE41174.1| unnamed protein product [Mus musculus]
 gi|74225182|dbj|BAE38280.1| unnamed protein product [Mus musculus]
 gi|148678870|gb|EDL10817.1| transcriptional regulator, SIN3B (yeast), isoform CRA_e [Mus
           musculus]
          Length = 293

 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 87/211 (41%), Positives = 108/211 (51%), Gaps = 46/211 (21%)

Query: 33  GGGGGGGAQKLTTN--DALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARV 90
           G  G GG +KL  +  DAL YL  VK  F      Y+ FLE+MK+FK+Q IDT GVI RV
Sbjct: 20  GRSGSGGHEKLPVHVEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRV 79

Query: 91  KELFKGHRDLILGFNTFLPKGYEITLPL-------------------------------- 118
            +LF  H DLI+GFN FLP GY I +P                                 
Sbjct: 80  SQLFHEHPDLIVGFNAFLPLGYRIDIPKNGKLNIQSPLSSQDNSHSHGDCGEDFKQMSYK 139

Query: 119 ED--EQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKE----------N 166
           ED  + P     VEF  AI++VNKIKTRF     +Y+SFL+IL+ Y+KE           
Sbjct: 140 EDRGQVPLESDSVEFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLHTKGRPFRG 199

Query: 167 KSITEVYQEVEALFQDHPDLLEEFTHFLPDS 197
            S  EV+ EV  LF+   DLL EF  FLP++
Sbjct: 200 MSEEEVFTEVANLFRGQEDLLSEFGQFLPEA 230


>gi|380806473|gb|AFE75112.1| paired amphipathic helix protein Sin3b, partial [Macaca mulatta]
          Length = 410

 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 89/212 (41%), Positives = 111/212 (52%), Gaps = 47/212 (22%)

Query: 33  GGGGGGGAQKLTTN--DALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARV 90
           G  G  G +KL  +  DAL YL  VK  F      Y+ FLE+MK+FK+Q IDT GVI RV
Sbjct: 14  GRSGSAGHEKLPVHVEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRV 73

Query: 91  KELFKGHRDLILGFNTFLPKGYEITLP-----------------------LED--EQPP- 124
            +LF  H DLI+GFN FLP GY I +P                        ED  +Q P 
Sbjct: 74  SQLFHEHPDLIVGFNAFLPLGYRIDIPKNGKLNIQSPLTSQENSHNHGDGAEDFKQQVPY 133

Query: 125 ----PKKP-----VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKE---------- 165
               P+ P     VEF  AI++VNKIKTRF     +Y+SFL+IL+ Y+KE          
Sbjct: 134 KEDKPQVPLESDSVEFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLNTRGRPFR 193

Query: 166 NKSITEVYQEVEALFQDHPDLLEEFTHFLPDS 197
             S  EV+ EV  LF+   DLL EF  FLP++
Sbjct: 194 GMSEEEVFTEVANLFRGQEDLLSEFGQFLPEA 225



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 5/79 (6%)

Query: 351 QELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGF 408
           QE SF +KV+  L+    Y+ FLRC+ L+ +E+++ SEL  LV   LG++P+L   F  F
Sbjct: 293 QEFSFFDKVRRVLKSQEVYENFLRCIALFNQELVSGSELLQLVSPFLGKFPELFAQFKSF 352

Query: 409 LARCEKSEELLADVMSKKS 427
           L   E S    A  MS +S
Sbjct: 353 LGVKELS---FAPPMSDRS 368


>gi|367052927|ref|XP_003656842.1| SIN3-like protein [Thielavia terrestris NRRL 8126]
 gi|347004107|gb|AEO70506.1| SIN3-like protein [Thielavia terrestris NRRL 8126]
          Length = 1718

 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 95/299 (31%), Positives = 146/299 (48%), Gaps = 27/299 (9%)

Query: 496  PIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHM 554
            P   + LSNC    PSYRLLPK   +   S R EL   VLND W S  T  SED  F   
Sbjct: 926  PTGRVSLSNCRGLGPSYRLLPKRERLKPCSGRDELCQSVLNDEWASHPTWASEDSGFVAH 985

Query: 555  RKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDG--------PIR 606
            RKN YEESL R E++R + D  +E+     ++  +LLE I    +            P  
Sbjct: 986  RKNAYEESLHRIEEERHDYDFYIEA----NQKCIQLLEPIAQQMLSLPASERANFKMPAG 1041

Query: 607  VEDHFTALNLRCIERLYG-DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNK 665
            +    T++  R ++++YG + G +V + + +     +PV++ RLKQK EEW   + ++ K
Sbjct: 1042 LGGQSTSIYKRVLKKIYGPEKGCEVANDMFRYPFTVVPVVMARLKQKDEEWRFTQREWEK 1101

Query: 666  VWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNR 725
            VW       + KSLDH     K  D ++L AK L   IK   E++R+     + +A G  
Sbjct: 1102 VWQAQTEVMHLKSLDHMGIQVKSNDKRNLAAKHLVDVIKTKHEEQRR-----IRMAKGK- 1155

Query: 726  RSIVPHLEFEYS--DPDIHEDL--YQLIKYSCGEMCTTEQLDKVMKIWTTFLEPMLGVP 780
                P  +F YS  D D+  DL  + +I  + G     ++  ++++ + TF+     +P
Sbjct: 1156 ---TPRYQFAYSFTDEDLILDLLRFMVIFANVGGQHNAQERRRILEFFETFIPQFFDLP 1211



 Score =  106 bits (264), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 55/108 (50%), Positives = 68/108 (62%), Gaps = 2/108 (1%)

Query: 13  QIKRPMISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEV 72
           Q + P  SS G   G     G GG    Q+   NDAL+YL  VK  F ++ + Y+ FL++
Sbjct: 410 QQQLPFGSSMG--PGHAMPAGPGGMPQGQQPILNDALSYLDQVKVQFHEQPDVYNRFLDI 467

Query: 73  MKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLED 120
           MKDFK+Q IDT GVI+RV ELF GH +LI GFNTFLP GY I   LE+
Sbjct: 468 MKDFKSQTIDTPGVISRVSELFAGHPNLIQGFNTFLPPGYRIECGLEN 515



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 85/304 (27%), Positives = 133/304 (43%), Gaps = 45/304 (14%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           + PVEF  AI++VNKIK RFQ    +YK FL+IL  Y++E K I +VY +V +LF   PD
Sbjct: 651 RGPVEFNHAISYVNKIKNRFQDKPEIYKQFLEILQTYQREQKPIQDVYSQVTSLFHTAPD 710

Query: 186 LLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQVHVDKKERAMASHADRDLS 245
           LLE+F  FLP+S+             S+      +MP A      +       H  RD  
Sbjct: 711 LLEDFKQFLPESAAQT---------RSVGPRAEESMPMAATTPTPQ-----PGHLARDGP 756

Query: 246 VDRPDPDHDRVLLKSDKDQRRRGEKERERRDDHRRERE-----RDDRDFENDVNRDFSMQ 300
              P  +       S  +++RR EK          E+      R         N+   + 
Sbjct: 757 KMPPVGNFAPPASASKDNKKRRPEKAPAGPAPSTSEQSQMSALRGTLPPAPSANKRAKLT 816

Query: 301 RFPHKRKSA---RKIEDSTAEPLHQGGEGDENFGMHPVSSSYDDKNAMKSMFSQELSFCE 357
             P+  +S      +  +  EPL             P++ S  D          +L+F E
Sbjct: 817 HKPNAAESTFIEPTLTPTMPEPL----------APTPLAVSTQD----------DLAFFE 856

Query: 358 KVKDKL--RDDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLARCEKS 415
           KVK  +  R    EFL+ L+L+ +++IT+  L       +G  P+L++G    L R + +
Sbjct: 857 KVKKHIGNRTATTEFLKLLNLWNQDLITKDLLIYKANQFMGGNPELLNGLRA-LVRQDTT 915

Query: 416 EELL 419
           +E++
Sbjct: 916 DEVV 919



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 65/306 (21%), Positives = 123/306 (40%), Gaps = 44/306 (14%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           ++P+   +A+++++++K +F     VY  FLDI+  ++ +      V   V  LF  HP+
Sbjct: 436 QQPI-LNDALSYLDQVKVQFHEQPDVYNRFLDIMKDFKSQTIDTPGVISRVSELFAGHPN 494

Query: 186 LLEEFTHFLPD------------------SSGAASIHYVPSGRNSILR-DRSSAMPTARQ 226
           L++ F  FLP                   +   ++IH +  GR S     + ++ P   Q
Sbjct: 495 LIQGFNTFLPPGYRIECGLENNPNSIRVTTPSGSTIHSI--GRASQHEATQPTSGPAHAQ 552

Query: 227 VHVDKKERAMASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERRDDHRRERERDD 286
            ++  +    A H     SV+ P+      +   +      G  +    D     ++R  
Sbjct: 553 GYLSSRSGWQAPHPH---SVESPEATFS--VPAQNGQPGFPGSNQGAPFDGTSPIQQRSV 607

Query: 287 RDFENDVNRDFSMQRFPHKRKSARKIEDSTAEPLHQGGEGDENFGMHPVSSSYDDKNAMK 346
              +N       M   P  R        +   P   GG  + N G     +  + +  ++
Sbjct: 608 PAAQNGT----PMNHAPAPR--------TALTPTPAGGPPNTNSGAASQQAILEKRGPVE 655

Query: 347 SMFSQELSFCEKVKDKLRDD---YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMD 403
             F+  +S+  K+K++ +D    Y++FL  L  Y +E     ++ S V  L    PDL++
Sbjct: 656 --FNHAISYVNKIKNRFQDKPEIYKQFLEILQTYQREQKPIQDVYSQVTSLFHTAPDLLE 713

Query: 404 GFNGFL 409
            F  FL
Sbjct: 714 DFKQFL 719



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 39/65 (60%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFN 105
           N A++Y+  +K+ FQDK E Y  FLE+++ ++ ++     V ++V  LF    DL+  F 
Sbjct: 657 NHAISYVNKIKNRFQDKPEIYKQFLEILQTYQREQKPIQDVYSQVTSLFHTAPDLLEDFK 716

Query: 106 TFLPK 110
            FLP+
Sbjct: 717 QFLPE 721


>gi|169234836|ref|NP_001108510.1| SIN3 homolog B, transcription regulator [Rattus norvegicus]
 gi|149036194|gb|EDL90860.1| rCG38713, isoform CRA_b [Rattus norvegicus]
 gi|165971316|gb|AAI58845.1| Sin3b protein [Rattus norvegicus]
          Length = 292

 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 87/211 (41%), Positives = 108/211 (51%), Gaps = 46/211 (21%)

Query: 33  GGGGGGGAQKLTTN--DALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARV 90
           G  G GG +KL  +  DAL YL  VK  F      Y+ FLE+MK+FK+Q IDT GVI RV
Sbjct: 20  GRSGSGGHEKLPVHVEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRV 79

Query: 91  KELFKGHRDLILGFNTFLPKGYEITLPL-------------------------------- 118
            +LF  H DLI+GFN FLP GY I +P                                 
Sbjct: 80  SQLFHEHPDLIVGFNAFLPLGYRIDIPKNGKLNIQSPLSNQDNSHSHGDCGEDFKQMSYK 139

Query: 119 ED--EQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKE----------N 166
           ED  + P     VEF  AI++VNKIKTRF     +Y+SFL+IL+ Y+KE           
Sbjct: 140 EDRGQVPLESDSVEFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLHTKGRPFRG 199

Query: 167 KSITEVYQEVEALFQDHPDLLEEFTHFLPDS 197
            S  EV+ EV  LF+   DLL EF  FLP++
Sbjct: 200 MSEEEVFTEVANLFRGQEDLLSEFGQFLPEA 230


>gi|19263477|gb|AAH25026.1| SIN3B protein, partial [Homo sapiens]
          Length = 352

 Score =  136 bits (342), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 89/212 (41%), Positives = 111/212 (52%), Gaps = 47/212 (22%)

Query: 33  GGGGGGGAQKLTTN--DALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARV 90
           G  G  G +KL  +  DAL YL  VK  F      Y+ FLE+MK+FK+Q IDT GVI RV
Sbjct: 26  GRSGSAGHEKLPVHVEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRV 85

Query: 91  KELFKGHRDLILGFNTFLPKGYEITLP-----------------------LED--EQPP- 124
            +LF  H DLI+GFN FLP GY I +P                        ED  +Q P 
Sbjct: 86  SQLFHEHPDLIVGFNAFLPLGYRIDIPKNGKLNIQSPLTSQENSHNHGDGAEDFKQQVPY 145

Query: 125 ----PKKP-----VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKE---------- 165
               P+ P     VEF  AI++VNKIKTRF     +Y+SFL+IL+ Y+KE          
Sbjct: 146 KEDKPQVPLESDSVEFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLNTRGRPFR 205

Query: 166 NKSITEVYQEVEALFQDHPDLLEEFTHFLPDS 197
             S  EV+ EV  LF+   DLL EF  FLP++
Sbjct: 206 GMSEEEVFTEVANLFRGQEDLLSEFGQFLPEA 237



 Score = 44.7 bits (104), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 21/48 (43%), Positives = 31/48 (64%), Gaps = 2/48 (4%)

Query: 351 QELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLG 396
           QE SF +KV+  L+    Y+ FLRC+ L+ +E+++ SEL  LV   LG
Sbjct: 305 QEFSFFDKVRRVLKSQEVYENFLRCIALFNQELVSGSELLQLVSPFLG 352


>gi|39793970|gb|AAH63531.1| SIN3B protein [Homo sapiens]
 gi|84569981|gb|AAI10822.1| SIN3B protein [Homo sapiens]
 gi|119604971|gb|EAW84565.1| SIN3 homolog B, transcription regulator (yeast), isoform CRA_b
           [Homo sapiens]
          Length = 353

 Score =  136 bits (342), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 89/212 (41%), Positives = 111/212 (52%), Gaps = 47/212 (22%)

Query: 33  GGGGGGGAQKLTTN--DALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARV 90
           G  G  G +KL  +  DAL YL  VK  F      Y+ FLE+MK+FK+Q IDT GVI RV
Sbjct: 27  GRSGSAGHEKLPVHVEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRV 86

Query: 91  KELFKGHRDLILGFNTFLPKGYEITLP-----------------------LED--EQPP- 124
            +LF  H DLI+GFN FLP GY I +P                        ED  +Q P 
Sbjct: 87  SQLFHEHPDLIVGFNAFLPLGYRIDIPKNGKLNIQSPLTSQENSHNHGDGAEDFKQQVPY 146

Query: 125 ----PKKP-----VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKE---------- 165
               P+ P     VEF  AI++VNKIKTRF     +Y+SFL+IL+ Y+KE          
Sbjct: 147 KEDKPQVPLESDSVEFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLNTRGRPFR 206

Query: 166 NKSITEVYQEVEALFQDHPDLLEEFTHFLPDS 197
             S  EV+ EV  LF+   DLL EF  FLP++
Sbjct: 207 GMSEEEVFTEVANLFRGQEDLLSEFGQFLPEA 238



 Score = 44.7 bits (104), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 21/48 (43%), Positives = 31/48 (64%), Gaps = 2/48 (4%)

Query: 351 QELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLG 396
           QE SF +KV+  L+    Y+ FLRC+ L+ +E+++ SEL  LV   LG
Sbjct: 306 QEFSFFDKVRRVLKSQEVYENFLRCIALFNQELVSGSELLQLVSPFLG 353


>gi|297811637|ref|XP_002873702.1| hypothetical protein ARALYDRAFT_350640 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297319539|gb|EFH49961.1| hypothetical protein ARALYDRAFT_350640 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 130

 Score =  136 bits (342), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 76/130 (58%), Positives = 88/130 (67%), Gaps = 10/130 (7%)

Query: 1   MKRSRDEV-YMNSQIKRPMISSRGEPSGQTQVVGGGGGGGA---------QKLTTNDALA 50
           MKR  DE+    SQ+K P+ S   E  GQ+ V G G   G          Q+L+T+DAL 
Sbjct: 1   MKRIGDEIDGSGSQVKPPLGSPPNESCGQSPVPGNGDNRGGIIGDRGVNTQRLSTDDALT 60

Query: 51  YLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPK 110
           YL  VK  FQD+R+KYD FLEVM DFK QRI T+G+IARVKEL KGH +LILGFNTFLPK
Sbjct: 61  YLMEVKRTFQDQRDKYDMFLEVMNDFKEQRIHTSGLIARVKELLKGHNNLILGFNTFLPK 120

Query: 111 GYEITLPLED 120
           GYEITL  ED
Sbjct: 121 GYEITLDNED 130


>gi|336389176|gb|EGO30319.1| hypothetical protein SERLADRAFT_444328 [Serpula lacrymans var.
           lacrymans S7.9]
          Length = 1251

 Score =  136 bits (342), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 93/283 (32%), Positives = 150/283 (53%), Gaps = 23/283 (8%)

Query: 510 PSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMRKNQYEESLFRCED 568
           PSYR LPK+ +  + S R +L   VLND WVS  T  SE+  F   +KN +EE+L + E+
Sbjct: 529 PSYRRLPKSEIRLACSGRDQLCRSVLNDEWVSHPTWASEEAGFIAHKKNSFEEALHKSEE 588

Query: 569 DRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TALNLRCIERLYG 624
           +R E  + +E++  T   +  +  +I   T +     R++        ++  R I+++YG
Sbjct: 589 ERHEYHVHIEALTRTIAILSPIAARIEEMTNEERAAFRLKPDLGGSSKSIYYRIIKKVYG 648

Query: 625 -DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRS 683
            D G +V+  L+   S+A+PVIL RLKQK +EW R + D++K W E+ +KN++KSLD++ 
Sbjct: 649 RDTGNEVIQALQDCPSVAVPVILARLKQKDDEWRRAQRDWSKTWREVDAKNFYKSLDYQG 708

Query: 684 FYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIV-----PHLEFEYSD 738
             FK  D KS+ AK     I+ I     K D   +    G R S V       LEF + D
Sbjct: 709 ISFKANDKKSITAKHFVGHIESI-----KADQARVQAEQG-RPSFVFGSLGHQLEFRFYD 762

Query: 739 PDIHED----LYQLIKYSCGEMCTTEQLDKVMKIWTTFLEPML 777
             +  D    +Y  +++S G+   +E+  + ++ W     P+L
Sbjct: 763 ISVLHDSLKMVYAFLEHSQGQYSLSER--RAIENWLRSFVPLL 803



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 86/297 (28%), Positives = 139/297 (46%), Gaps = 29/297 (9%)

Query: 118 LEDEQPPPKKPV-EFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI--TEVYQ 174
           L ++ P   KP  EF  AI ++NKIK R+  D   YK FL+IL  Y+KE + +  ++VY 
Sbjct: 214 LNNKHPVENKPAGEFNHAIQYLNKIKARYADDPDTYKQFLEILQTYQKEQRHLHDSQVYV 273

Query: 175 EVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQVHVDKKER 234
           +V+ LF+D PDLL EF  FLP+ + A++    PSG   IL       PTA          
Sbjct: 274 QVQMLFKDAPDLLSEFKDFLPEVANASA---GPSGVVGIL-----PHPTA-------GPG 318

Query: 235 AMASHADRDLSVDRPDPDHDRVLLKSDKDQRRRG-EKERERRDDHRRERERDDRDFENDV 293
             +     D+S    +    +  L + K  RRRG EK+     + +    R  +   N+ 
Sbjct: 319 VPSPWNQPDMSTAASEKGLKKAALTAKK--RRRGPEKDTTPALNVKGSLSRSKKTKLNNK 376

Query: 294 NRDFSMQRFPHKRKSARKIEDSTAEPLHQGGEGDENFGMHPVSSSYDDKNAMKSMFSQEL 353
               S +  P+    +     ++        +  +  G H V +  +   A+ S    EL
Sbjct: 377 ADPESPRFSPYPVPGSPLPHAASVTQAPGVMQPPQGHGQHSVQAFTNSSYALGSSTPDEL 436

Query: 354 SFCEKVKDKL--RDDYQEFLRCLHLYTKEIITRSELQSLV------GDLLGRYPDLM 402
            F ++ K  L  R+ Y++FL+ L+LY+K+II    L  +       G+LL ++ D++
Sbjct: 437 LFFDRAKKALEGRETYEDFLKILNLYSKDIIDAKMLVDMARAFLGDGELLTQFKDVI 493



 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 44/74 (59%), Positives = 53/74 (71%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
           L   DAL+YL AVK  FQDK + Y+ FL++MKDFK++ IDT GVI RV  LF G+  LI 
Sbjct: 38  LNVTDALSYLDAVKVQFQDKPDVYNHFLDIMKDFKSEVIDTPGVIERVSLLFHGNPYLIQ 97

Query: 103 GFNTFLPKGYEITL 116
           GFNTFLP GY I +
Sbjct: 98  GFNTFLPPGYRIEM 111



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 39/69 (56%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDL 186
           +P+   +A+++++ +K +FQ    VY  FLDI+  ++ E      V + V  LF  +P L
Sbjct: 36  RPLNVTDALSYLDAVKVQFQDKPDVYNHFLDIMKDFKSEVIDTPGVIERVSLLFHGNPYL 95

Query: 187 LEEFTHFLP 195
           ++ F  FLP
Sbjct: 96  IQGFNTFLP 104



 Score = 42.0 bits (97), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 2/67 (2%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDF-KAQR-IDTAGVIARVKELFKGHRDLILG 103
           N A+ YL  +K  + D  + Y  FLE+++ + K QR +  + V  +V+ LFK   DL+  
Sbjct: 229 NHAIQYLNKIKARYADDPDTYKQFLEILQTYQKEQRHLHDSQVYVQVQMLFKDAPDLLSE 288

Query: 104 FNTFLPK 110
           F  FLP+
Sbjct: 289 FKDFLPE 295


>gi|336376084|gb|EGO04419.1| hypothetical protein SERLA73DRAFT_100545 [Serpula lacrymans var.
           lacrymans S7.3]
          Length = 1252

 Score =  136 bits (342), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 93/283 (32%), Positives = 150/283 (53%), Gaps = 23/283 (8%)

Query: 510 PSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMRKNQYEESLFRCED 568
           PSYR LPK+ +  + S R +L   VLND WVS  T  SE+  F   +KN +EE+L + E+
Sbjct: 530 PSYRRLPKSEIRLACSGRDQLCRSVLNDEWVSHPTWASEEAGFIAHKKNSFEEALHKSEE 589

Query: 569 DRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TALNLRCIERLYG 624
           +R E  + +E++  T   +  +  +I   T +     R++        ++  R I+++YG
Sbjct: 590 ERHEYHVHIEALTRTIAILSPIAARIEEMTNEERAAFRLKPDLGGSSKSIYYRIIKKVYG 649

Query: 625 -DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRS 683
            D G +V+  L+   S+A+PVIL RLKQK +EW R + D++K W E+ +KN++KSLD++ 
Sbjct: 650 RDTGNEVIQALQDCPSVAVPVILARLKQKDDEWRRAQRDWSKTWREVDAKNFYKSLDYQG 709

Query: 684 FYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIV-----PHLEFEYSD 738
             FK  D KS+ AK     I+ I     K D   +    G R S V       LEF + D
Sbjct: 710 ISFKANDKKSITAKHFVGHIESI-----KADQARVQAEQG-RPSFVFGSLGHQLEFRFYD 763

Query: 739 PDIHED----LYQLIKYSCGEMCTTEQLDKVMKIWTTFLEPML 777
             +  D    +Y  +++S G+   +E+  + ++ W     P+L
Sbjct: 764 ISVLHDSLKMVYAFLEHSQGQYSLSER--RAIENWLRSFVPLL 804



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 86/314 (27%), Positives = 135/314 (42%), Gaps = 62/314 (19%)

Query: 118 LEDEQPPPKKPV-EFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI--TEVYQ 174
           L ++ P   KP  EF  AI ++NKIK R+  D   YK FL+IL  Y+KE + +  ++VY 
Sbjct: 214 LNNKHPVENKPAGEFNHAIQYLNKIKARYADDPDTYKQFLEILQTYQKEQRHLHDSQVYV 273

Query: 175 EVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQVHVDKKER 234
           +V+ LF+D PDLL EF  FLP+ + A++    PSG   IL                    
Sbjct: 274 QVQMLFKDAPDLLSEFKDFLPEVANASA---GPSGVVGIL-------------------- 310

Query: 235 AMASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERRDDHRRERERDDRDFENDVN 294
               H      V  P    D     S+K  ++     ++R       R   ++D    +N
Sbjct: 311 ---PHPTAGPGVPSPWNQPDMSTAASEKGLKKAALTAKKR-------RRGPEKDTTPALN 360

Query: 295 RDFSMQRFPHKRKSARKIEDST---------AEPLHQGG---------EGDENFGMHPVS 336
              S+ R   K K   K +  +           PL             +  +  G H V 
Sbjct: 361 VKGSLSRVFQKTKLNNKADPESPRFSPYPVPGSPLPHAASVTQAPGVMQPPQGHGQHSVQ 420

Query: 337 SSYDDKNAMKSMFSQELSFCEKVKDKL--RDDYQEFLRCLHLYTKEIITRSELQSLV--- 391
           +  +   A+ S    EL F ++ K  L  R+ Y++FL+ L+LY+K+II    L  +    
Sbjct: 421 AFTNSSYALGSSTPDELLFFDRAKKALEGRETYEDFLKILNLYSKDIIDAKMLVDMARAF 480

Query: 392 ---GDLLGRYPDLM 402
              G+LL ++ D++
Sbjct: 481 LGDGELLTQFKDVI 494



 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 44/74 (59%), Positives = 53/74 (71%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
           L   DAL+YL AVK  FQDK + Y+ FL++MKDFK++ IDT GVI RV  LF G+  LI 
Sbjct: 38  LNVTDALSYLDAVKVQFQDKPDVYNHFLDIMKDFKSEVIDTPGVIERVSLLFHGNPYLIQ 97

Query: 103 GFNTFLPKGYEITL 116
           GFNTFLP GY I +
Sbjct: 98  GFNTFLPPGYRIEM 111



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 39/69 (56%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDL 186
           +P+   +A+++++ +K +FQ    VY  FLDI+  ++ E      V + V  LF  +P L
Sbjct: 36  RPLNVTDALSYLDAVKVQFQDKPDVYNHFLDIMKDFKSEVIDTPGVIERVSLLFHGNPYL 95

Query: 187 LEEFTHFLP 195
           ++ F  FLP
Sbjct: 96  IQGFNTFLP 104



 Score = 42.0 bits (97), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 2/67 (2%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDF-KAQR-IDTAGVIARVKELFKGHRDLILG 103
           N A+ YL  +K  + D  + Y  FLE+++ + K QR +  + V  +V+ LFK   DL+  
Sbjct: 229 NHAIQYLNKIKARYADDPDTYKQFLEILQTYQKEQRHLHDSQVYVQVQMLFKDAPDLLSE 288

Query: 104 FNTFLPK 110
           F  FLP+
Sbjct: 289 FKDFLPE 295


>gi|2921547|gb|AAC04821.1| transcriptional repressor SIN3B [Mus musculus]
          Length = 293

 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 87/210 (41%), Positives = 107/210 (50%), Gaps = 46/210 (21%)

Query: 33  GGGGGGGAQKLTTN--DALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARV 90
           G  G GG +KL  +  DAL YL  VK  F      Y+ FLE+MK+FK+Q IDT GVI RV
Sbjct: 20  GRSGSGGHEKLPVHVEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRV 79

Query: 91  KELFKGHRDLILGFNTFLPKGYEITLPL-------------------------------- 118
            +LF  H DLI+GFN FLP GY I +P                                 
Sbjct: 80  SQLFHEHPDLIVGFNAFLPLGYRIDIPKNGKLNIQSPLSSQDNSHSHGDCGEDFKQMSYK 139

Query: 119 ED--EQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKE----------N 166
           ED  + P     VEF  AI++VNKIKTRF     +Y+SFL+IL+ Y+KE           
Sbjct: 140 EDRGQVPLESDSVEFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLHTKGRPFRG 199

Query: 167 KSITEVYQEVEALFQDHPDLLEEFTHFLPD 196
            S  EV+ EV  LF+   DLL EF  FLP+
Sbjct: 200 MSEEEVFTEVANLFRGQEDLLSEFGQFLPE 229



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 10/76 (13%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAG----------VIARVKELFK 95
           N+A++Y+  +K  F D  E Y  FLE++  ++ +++ T G          V   V  LF+
Sbjct: 155 NNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLHTKGRPFRGMSEEEVFTEVANLFR 214

Query: 96  GHRDLILGFNTFLPKG 111
           G  DL+  F  FLP+G
Sbjct: 215 GQEDLLSEFGQFLPEG 230


>gi|358390388|gb|EHK39794.1| hypothetical protein TRIATDRAFT_254023 [Trichoderma atroviride IMI
           206040]
          Length = 1452

 Score =  135 bits (341), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 98/296 (33%), Positives = 151/296 (51%), Gaps = 24/296 (8%)

Query: 490 DKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSED 548
           D   A P++++ LSNC    PSYRLLPK   +   S R EL   VLND W S  T  SED
Sbjct: 677 DNRPAPPLEKVSLSNCRGYGPSYRLLPKRERLKPCSGRDELCNSVLNDEWASHPTWASED 736

Query: 549 YSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDG----- 603
             F   RKNQ+EE L R E++R + D  +E+      +  +LLE I    +         
Sbjct: 737 SGFVAHRKNQFEEGLHRIEEERHDYDFNIEA----NLKCIQLLEPIAQQMLAMSPSEREA 792

Query: 604 ---PIRVEDHFTALNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCR 660
              P  +    T++  R  +++YG+ G+DV++ +  +    +PV+L R+KQK EEW   +
Sbjct: 793 FHMPSALAGQSTSIFKRICKKIYGERGIDVVNDMYTHPFDVIPVLLARMKQKDEEWRFSQ 852

Query: 661 SDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAI 720
            ++ KVW       + KSLDH     K  D ++L AK L   IK   E++R+E  +L   
Sbjct: 853 REWEKVWHAQTHNMHLKSLDHMGILVKSTDKRNLTAKHLVDVIKTKHEEQRRE-RILKGK 911

Query: 721 AAGNRRSIVPHLEFEYSDPDIHEDLYQLIK-YSC--GEMCTTEQLDKVMKIWTTFL 773
           A   R   V    +++ D D+  DL +L+  YS   G+    E+ ++++  + TF+
Sbjct: 912 AP--RHQFV----WDFKDKDVVLDLLRLMMLYSMHNGQHSGQEK-ERILDFFETFV 960



 Score = 99.8 bits (247), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 52/95 (54%), Positives = 61/95 (64%), Gaps = 2/95 (2%)

Query: 20  SSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQ 79
           S  G   G  Q+ GG   G  Q+   NDAL YL  VK  F D+ + Y+ FL++MKDFK+Q
Sbjct: 179 SMVGVAPGGHQIPGGITQG--QQPILNDALTYLDQVKVQFHDQPDVYNRFLDIMKDFKSQ 236

Query: 80  RIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEI 114
            IDT GVI RV ELF GH +LI GFNTFLP GY I
Sbjct: 237 AIDTPGVINRVSELFAGHPNLIQGFNTFLPPGYRI 271



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 82/287 (28%), Positives = 122/287 (42%), Gaps = 33/287 (11%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           + PVEF  AI++VNKIK RFQ    +YK FL+IL  Y++E K I +VY +V  LF   PD
Sbjct: 413 RGPVEFNHAISYVNKIKNRFQDKPEIYKQFLEILQTYQREQKPIQDVYAQVTTLFNSAPD 472

Query: 186 LLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQVHVDKKERAMASHADRDLS 245
           LLE+F  FLP+S+G A     P GR        SA      +   +K   + S A     
Sbjct: 473 LLEDFKQFLPESAGQAR---APPGRPEDGTAAGSAHTPQPGLRDGQKMPPLGSFA----- 524

Query: 246 VDRPDPDHDRVLLKSDKDQRRRGEKERERRDDHRRERERDDRDFENDVNRDFSMQRFPHK 305
                     V    D  +R R +K+         E     R     +N      +  H 
Sbjct: 525 --------PPVSAGKDTKKRPRTDKQTPTPGALLPEPPVATRIPPQTLNGS-KRPKLSHA 575

Query: 306 RKSARKIEDSTAEPLHQGGEGDENFGMHPVSSSYDDKNAMKSMFSQELSFCEKVKDKL-- 363
           R S    +  + EP            + PV        +  +   +E++F E+VK  L  
Sbjct: 576 RGSG---DAGSIEPT-----------LTPVMPEPYPPRSPATSNQEEIAFFERVKKFLSN 621

Query: 364 RDDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLA 410
           R    EFL+  +L+++ II ++ L       +   P+LM  +  F+ 
Sbjct: 622 RSAMNEFLKLCNLFSQNIIDKNTLYHKGALFISANPELMTFWKAFVG 668



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 39/65 (60%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFN 105
           N A++Y+  +K+ FQDK E Y  FLE+++ ++ ++     V A+V  LF    DL+  F 
Sbjct: 419 NHAISYVNKIKNRFQDKPEIYKQFLEILQTYQREQKPIQDVYAQVTTLFNSAPDLLEDFK 478

Query: 106 TFLPK 110
            FLP+
Sbjct: 479 QFLPE 483



 Score = 49.7 bits (117), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 25/87 (28%), Positives = 45/87 (51%), Gaps = 5/87 (5%)

Query: 109 PKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKS 168
           P G++I   +   Q    +P+   +A+ +++++K +F     VY  FLDI+  ++ +   
Sbjct: 185 PGGHQIPGGITQGQ----QPI-LNDALTYLDQVKVQFHDQPDVYNRFLDIMKDFKSQAID 239

Query: 169 ITEVYQEVEALFQDHPDLLEEFTHFLP 195
              V   V  LF  HP+L++ F  FLP
Sbjct: 240 TPGVINRVSELFAGHPNLIQGFNTFLP 266


>gi|340517025|gb|EGR47271.1| predicted protein [Trichoderma reesei QM6a]
          Length = 1452

 Score =  135 bits (341), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 103/319 (32%), Positives = 159/319 (49%), Gaps = 33/319 (10%)

Query: 490 DKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSED 548
           D   A P++++ LSNC    PSYRLLPK   +   S R EL   VLND W S  T  SED
Sbjct: 677 DNRPAPPVEKVSLSNCRGYGPSYRLLPKRERLKPCSGRDELCNSVLNDDWASHPTWASED 736

Query: 549 YSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVE 608
             F   RKNQ+EE L R E++R + D  +E+      +  +LLE I    +      R  
Sbjct: 737 SGFVAHRKNQFEEGLHRIEEERHDYDFNIEA----NLKCIQLLEPIAQQMLAMSPAEREA 792

Query: 609 DHF--------TALNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCR 660
            H         T++  R  +++YG+ G+DV++ +  +    +PV+L R+KQK EEW   +
Sbjct: 793 FHMPSALAGQSTSIFKRICKKIYGERGIDVVNDMYTHPFDVVPVLLARMKQKDEEWRFSQ 852

Query: 661 SDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAI 720
            ++ KVW       + KSLDH     K  D ++L AK L   IK   E++R+E  +L   
Sbjct: 853 REWEKVWHAQTHNMHLKSLDHMGILVKSTDKRNLTAKHLIDVIKTKHEEQRRE-RILKGK 911

Query: 721 AAGNRRSIVPHLEFEYSDPDIHEDLYQLIK-YSC--GEMCTTEQLDKVMKIWTTFLEPML 777
           A   R   V    +++ D ++  DL +L+  YS   G+    E+ ++++  + TF+    
Sbjct: 912 AP--RHQFV----WDFKDKEVVLDLLRLMMLYSMHNGQHSGQEK-ERILDFFETFVPTFF 964

Query: 778 GVPSRPQGAEDTEDVVKAK 796
            +P         EDVV+ +
Sbjct: 965 DLP---------EDVVQER 974



 Score =  105 bits (263), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/287 (29%), Positives = 126/287 (43%), Gaps = 32/287 (11%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           + PVEF  AI++VNKIK RFQ    +YK FL+IL  Y++E K I +VY +V  LF   PD
Sbjct: 412 RGPVEFNHAISYVNKIKNRFQDKPEIYKQFLEILQTYQREQKPIQDVYAQVTTLFNSAPD 471

Query: 186 LLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQVHVDKKERAMASHADRDLS 245
           LLE+F  FLP+S+G A     P GR        S+      +   +K   + S       
Sbjct: 472 LLEDFKQFLPESAGQARA--PPGGRQDDGAAAGSSHTPQPGMRDGQKMPPLGSF------ 523

Query: 246 VDRPDPDHDRVLLKSDKDQRRRGEKERERRDDHRRERERDDRDFENDVNRDFSMQRFPHK 305
              P P    V    D  +R R +K+         E     R    ++N      +  H 
Sbjct: 524 ---PPP----VSAAKDNKKRPRTDKQTPTPGAPLAEPPSSARLPPQNINGS-KRPKLSHV 575

Query: 306 RKSARKIEDSTAEPLHQGGEGDENFGMHPVSSSYDDKNAMKSMFSQELSFCEKVKDKL-- 363
           R S    + ++ EP            + PV        +  +   +E++F E+VK  L  
Sbjct: 576 RGSG---DGASIEPT-----------LTPVMPEPYPPRSPATSNQEEIAFFERVKKYLSN 621

Query: 364 RDDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLA 410
           R    EFL+  +L+++ II ++ L       +G  PDLM  +  F+ 
Sbjct: 622 RSSMNEFLKLCNLFSQNIIDKNTLYHKGALFIGASPDLMSFWKAFVG 668



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 51/92 (55%), Positives = 60/92 (65%), Gaps = 2/92 (2%)

Query: 23  GEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRID 82
           G   G  Q+ GG   G  Q+   NDAL YL  VK  F D+ + Y+ FL++MKDFK+Q ID
Sbjct: 182 GVAPGGHQMPGGITQG--QQPILNDALTYLDQVKVQFHDQPDVYNRFLDIMKDFKSQAID 239

Query: 83  TAGVIARVKELFKGHRDLILGFNTFLPKGYEI 114
           T GVI RV ELF GH +LI GFNTFLP GY I
Sbjct: 240 TPGVINRVSELFAGHPNLIQGFNTFLPPGYRI 271



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 12/97 (12%)

Query: 26  SGQTQVVGGGGG---GGAQ---------KLTTNDALAYLKAVKDIFQDKREKYDDFLEVM 73
           SG T +   G G   GGA           +  N A++Y+  +K+ FQDK E Y  FLE++
Sbjct: 386 SGHTPMPASGPGAVNGGAANPANMERRGPVEFNHAISYVNKIKNRFQDKPEIYKQFLEIL 445

Query: 74  KDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPK 110
           + ++ ++     V A+V  LF    DL+  F  FLP+
Sbjct: 446 QTYQREQKPIQDVYAQVTTLFNSAPDLLEDFKQFLPE 482



 Score = 49.3 bits (116), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 21/70 (30%), Positives = 39/70 (55%), Gaps = 1/70 (1%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           ++P+   +A+ +++++K +F     VY  FLDI+  ++ +      V   V  LF  HP+
Sbjct: 198 QQPI-LNDALTYLDQVKVQFHDQPDVYNRFLDIMKDFKSQAIDTPGVINRVSELFAGHPN 256

Query: 186 LLEEFTHFLP 195
           L++ F  FLP
Sbjct: 257 LIQGFNTFLP 266


>gi|361130326|gb|EHL02139.1| putative Paired amphipathic helix protein pst1 [Glarea lozoyensis
           74030]
          Length = 1231

 Score =  135 bits (341), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 89/265 (33%), Positives = 130/265 (49%), Gaps = 24/265 (9%)

Query: 496 PIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHM 554
           P   + LSNC    PSYRLLP+   +   S R E+   VLND W S  T  SED  F   
Sbjct: 453 PTGRVSLSNCRGLGPSYRLLPRRERLKPCSGRDEMCNAVLNDDWASHPTWASEDSGFVAH 512

Query: 555 RKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDG--------PIR 606
           RKN +EE+L R E++R + D  +E+      +V +LLE I    +            PI 
Sbjct: 513 RKNVFEEALHRIEEERHDYDFNIEA----NAKVIQLLEPIGQTLLSLSAEERRVFRMPIG 568

Query: 607 VEDHFTALNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKV 666
           +     A+  R ++++YG+ G +V   L K+    LP++L RLKQK EEW   + ++ KV
Sbjct: 569 LGGQSQAIYKRVLKKIYGERGPEVASDLFKDPCAVLPIVLARLKQKDEEWRFTQREWEKV 628

Query: 667 WAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRR 726
           W       Y KSLDH     KQ D K   AK L   IK   E++R++  +         +
Sbjct: 629 WHAQTESMYLKSLDHMGIQAKQSDKKHFAAKHLVDAIKTKHEEQRRQRSL---------K 679

Query: 727 SIVPHLEF--EYSDPDIHEDLYQLI 749
             VP  +F  E++D  +  D+ + +
Sbjct: 680 GRVPKYQFSYEFTDQQVITDVVRFM 704



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 38/69 (55%), Positives = 49/69 (71%)

Query: 128 PVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLL 187
           PVEF  AI++VNKIK RFQ    +YK FL+IL  Y++E+K I +VY +V  LF   PDLL
Sbjct: 182 PVEFNHAISYVNKIKNRFQDRPEIYKQFLEILQTYQRESKPIQDVYAQVTHLFNTAPDLL 241

Query: 188 EEFTHFLPD 196
           E+F  FLP+
Sbjct: 242 EDFKQFLPE 250



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 5/91 (5%)

Query: 25  PSGQTQVVGGGGGGGAQK-----LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQ 79
           P+   Q++ G G    +K     +  N A++Y+  +K+ FQD+ E Y  FLE+++ ++ +
Sbjct: 160 PTPGAQIMNGAGIREMEKQRGGPVEFNHAISYVNKIKNRFQDRPEIYKQFLEILQTYQRE 219

Query: 80  RIDTAGVIARVKELFKGHRDLILGFNTFLPK 110
                 V A+V  LF    DL+  F  FLP+
Sbjct: 220 SKPIQDVYAQVTHLFNTAPDLLEDFKQFLPE 250



 Score = 42.7 bits (99), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 21/63 (33%), Positives = 37/63 (58%), Gaps = 2/63 (3%)

Query: 350 SQELSFCEKVKDKL--RDDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNG 407
           S+EL+F ++VK  +  +    EFL+  +L+++++I R+ L   V   +G  PDLM  F  
Sbjct: 376 SEELAFFDRVKKYIGNKSTMNEFLKLCNLFSQDLIDRNVLVHKVSAFIGGNPDLMSWFRS 435

Query: 408 FLA 410
           F+ 
Sbjct: 436 FVG 438


>gi|152211833|gb|ABS31138.1| transcriptional co repressor SIN3A [Cyclorana alboguttata]
          Length = 160

 Score =  135 bits (341), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 64/160 (40%), Positives = 105/160 (65%), Gaps = 4/160 (2%)

Query: 501 DLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYE 560
           D ++C+R   SYR LPK++  P  + RT L  EVLND WVS+ S SED +F   +K QYE
Sbjct: 1   DYASCKRLGSSYRALPKSFQQPKCTGRTPLCKEVLNDTWVSLPSWSEDSTFVSSKKTQYE 60

Query: 561 ESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TALNL 616
           E ++RCED+RFELD++LE+   T + +E + +K++  + +     R+++        ++ 
Sbjct: 61  EHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSAEDQAKFRLDNTLGGTSEVIHR 120

Query: 617 RCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEW 656
           + ++R+Y D   D++D L+KN ++A+P++L RLK K+EEW
Sbjct: 121 KALQRIYADKAADIIDGLKKNPAVAVPIVLKRLKMKEEEW 160


>gi|119180106|ref|XP_001241560.1| hypothetical protein CIMG_08723 [Coccidioides immitis RS]
          Length = 1572

 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 89/246 (36%), Positives = 131/246 (53%), Gaps = 23/246 (9%)

Query: 500  LDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMRKNQ 558
            ++L++C    PSYRLLPK       S R EL   VLND W S  T  SED  F   RKNQ
Sbjct: 795  VNLAHCRALGPSYRLLPKLERQKPCSGRDELCQSVLNDEWASHPTWASEDSGFVAHRKNQ 854

Query: 559  YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDG-------PIRVEDHF 611
            +E+SL R E+DR + D  +E+   T + +E LL++I   +I T+        P  +    
Sbjct: 855  HEDSLHRVEEDRHDYDHYIEAGIRTIQLMEALLQQI---SIMTESDRANFKLPPGLGGQS 911

Query: 612  TALNLRCIERLY-GDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEI 670
              +  + I+++Y  ++GL ++D L  N S  LP+++ RLKQK EEW   + ++ KVW E 
Sbjct: 912  ETIYKKVIKKVYDKEYGLRIIDELFANPSQVLPIVIARLKQKVEEWKLSQREWEKVWREQ 971

Query: 671  YSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVP 730
              K Y +SLDH+S   K+ D K+L  K   AE++   E+ R             RRS  P
Sbjct: 972  MQKGYWRSLDHQSSINKKDDKKTLTTKHFQAEVQAKFEEAR-----------ALRRSGFP 1020

Query: 731  HLEFEY 736
             L +++
Sbjct: 1021 VLSYQF 1026



 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 43/75 (57%), Positives = 51/75 (68%)

Query: 40  AQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRD 99
            Q+   NDAL+YL  VK  F +  + Y+ FL++MKDFK+Q IDT GVI RV  LF GH  
Sbjct: 239 GQQPILNDALSYLDQVKVRFVEHPDVYNRFLDIMKDFKSQAIDTPGVIQRVSTLFNGHPT 298

Query: 100 LILGFNTFLPKGYEI 114
           LI GFNTFLP GY I
Sbjct: 299 LIQGFNTFLPPGYRI 313



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 39/78 (50%), Positives = 53/78 (67%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           + PVEF  AI++VNKIK RF     +YK FL+IL  Y++E+K I +VY +V  LF   PD
Sbjct: 502 RGPVEFNHAISYVNKIKNRFADSPEIYKQFLEILQTYQRESKPIQDVYAQVTVLFNSAPD 561

Query: 186 LLEEFTHFLPDSSGAASI 203
           LLE+F  FLP+S+  A +
Sbjct: 562 LLEDFKQFLPESAAQAKV 579



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 12/98 (12%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           ++P+   +A+++++++K RF     VY  FLDI+  ++ +      V Q V  LF  HP 
Sbjct: 240 QQPI-LNDALSYLDQVKVRFVEHPDVYNRFLDIMKDFKSQAIDTPGVIQRVSTLFNGHPT 298

Query: 186 LLEEFTHFLP----------DSSGAASIHYVPSGRNSI 213
           L++ F  FLP          D+  A  +   PSG N+I
Sbjct: 299 LIQGFNTFLPPGYRIECGPDDNPDAIRV-TTPSGTNTI 335



 Score = 47.8 bits (112), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 7/94 (7%)

Query: 24  EPSGQTQVVGGGGGGGAQKLTT-------NDALAYLKAVKDIFQDKREKYDDFLEVMKDF 76
           +P+     +G G   G Q   T       N A++Y+  +K+ F D  E Y  FLE+++ +
Sbjct: 479 QPATSLAGMGSGVLQGTQNEATRRGPVEFNHAISYVNKIKNRFADSPEIYKQFLEILQTY 538

Query: 77  KAQRIDTAGVIARVKELFKGHRDLILGFNTFLPK 110
           + +      V A+V  LF    DL+  F  FLP+
Sbjct: 539 QRESKPIQDVYAQVTVLFNSAPDLLEDFKQFLPE 572


>gi|303321159|ref|XP_003070574.1| Paired amphipathic helix repeat family protein [Coccidioides
            posadasii C735 delta SOWgp]
 gi|240110270|gb|EER28429.1| Paired amphipathic helix repeat family protein [Coccidioides
            posadasii C735 delta SOWgp]
          Length = 1557

 Score =  135 bits (339), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 89/246 (36%), Positives = 131/246 (53%), Gaps = 23/246 (9%)

Query: 500  LDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMRKNQ 558
            ++L++C    PSYRLLPK       S R EL   VLND W S  T  SED  F   RKNQ
Sbjct: 780  VNLAHCRALGPSYRLLPKLERQKPCSGRDELCQSVLNDEWASHPTWASEDSGFVAHRKNQ 839

Query: 559  YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDG-------PIRVEDHF 611
            +E+SL R E+DR + D  +E+   T + +E LL++I   +I T+        P  +    
Sbjct: 840  HEDSLHRVEEDRHDYDHYIEAGIRTIQLMEALLQQI---SIMTESDRANFKLPPGLGGQS 896

Query: 612  TALNLRCIERLY-GDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEI 670
              +  + I+++Y  ++GL ++D L  N S  LP+++ RLKQK EEW   + ++ KVW E 
Sbjct: 897  ETIYKKVIKKVYDKEYGLRIIDELFANPSQVLPIVIARLKQKVEEWKLSQREWEKVWREQ 956

Query: 671  YSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVP 730
              K Y +SLDH+S   K+ D K+L  K   AE++   E+ R             RRS  P
Sbjct: 957  MQKGYWRSLDHQSSINKKDDKKTLTTKHFQAEVQAKFEEAR-----------ALRRSGFP 1005

Query: 731  HLEFEY 736
             L +++
Sbjct: 1006 VLSYQF 1011



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 43/75 (57%), Positives = 51/75 (68%)

Query: 40  AQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRD 99
            Q+   NDAL+YL  VK  F +  + Y+ FL++MKDFK+Q IDT GVI RV  LF GH  
Sbjct: 226 GQQPILNDALSYLDQVKVRFVEHPDVYNRFLDIMKDFKSQAIDTPGVIQRVSTLFNGHPT 285

Query: 100 LILGFNTFLPKGYEI 114
           LI GFNTFLP GY I
Sbjct: 286 LIQGFNTFLPPGYRI 300



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 39/78 (50%), Positives = 53/78 (67%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           + PVEF  AI++VNKIK RF     +YK FL+IL  Y++E+K I +VY +V  LF   PD
Sbjct: 487 RGPVEFNHAISYVNKIKNRFADSPEIYKQFLEILQTYQRESKPIQDVYAQVTVLFNSAPD 546

Query: 186 LLEEFTHFLPDSSGAASI 203
           LLE+F  FLP+S+  A +
Sbjct: 547 LLEDFKQFLPESAAQAKV 564



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 1/70 (1%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           ++P+   +A+++++++K RF     VY  FLDI+  ++ +      V Q V  LF  HP 
Sbjct: 227 QQPI-LNDALSYLDQVKVRFVEHPDVYNRFLDIMKDFKSQAIDTPGVIQRVSTLFNGHPT 285

Query: 186 LLEEFTHFLP 195
           L++ F  FLP
Sbjct: 286 LIQGFNTFLP 295



 Score = 47.8 bits (112), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 7/94 (7%)

Query: 24  EPSGQTQVVGGGGGGGAQKLTT-------NDALAYLKAVKDIFQDKREKYDDFLEVMKDF 76
           +P+     +G G   G Q   T       N A++Y+  +K+ F D  E Y  FLE+++ +
Sbjct: 464 QPATSLAGMGSGVLQGTQNEATRRGPVEFNHAISYVNKIKNRFADSPEIYKQFLEILQTY 523

Query: 77  KAQRIDTAGVIARVKELFKGHRDLILGFNTFLPK 110
           + +      V A+V  LF    DL+  F  FLP+
Sbjct: 524 QRESKPIQDVYAQVTVLFNSAPDLLEDFKQFLPE 557


>gi|392866563|gb|EJB11143.1| transcriptional repressor Sin3p [Coccidioides immitis RS]
          Length = 1628

 Score =  135 bits (339), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 89/246 (36%), Positives = 131/246 (53%), Gaps = 23/246 (9%)

Query: 500  LDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMRKNQ 558
            ++L++C    PSYRLLPK       S R EL   VLND W S  T  SED  F   RKNQ
Sbjct: 851  VNLAHCRALGPSYRLLPKLERQKPCSGRDELCQSVLNDEWASHPTWASEDSGFVAHRKNQ 910

Query: 559  YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDG-------PIRVEDHF 611
            +E+SL R E+DR + D  +E+   T + +E LL++I   +I T+        P  +    
Sbjct: 911  HEDSLHRVEEDRHDYDHYIEAGIRTIQLMEALLQQI---SIMTESDRANFKLPPGLGGQS 967

Query: 612  TALNLRCIERLY-GDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEI 670
              +  + I+++Y  ++GL ++D L  N S  LP+++ RLKQK EEW   + ++ KVW E 
Sbjct: 968  ETIYKKVIKKVYDKEYGLRIIDELFANPSQVLPIVIARLKQKVEEWKLSQREWEKVWREQ 1027

Query: 671  YSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVP 730
              K Y +SLDH+S   K+ D K+L  K   AE++   E+ R             RRS  P
Sbjct: 1028 MQKGYWRSLDHQSSINKKDDKKTLTTKHFQAEVQAKFEEAR-----------ALRRSGFP 1076

Query: 731  HLEFEY 736
             L +++
Sbjct: 1077 VLSYQF 1082



 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 43/75 (57%), Positives = 51/75 (68%)

Query: 40  AQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRD 99
            Q+   NDAL+YL  VK  F +  + Y+ FL++MKDFK+Q IDT GVI RV  LF GH  
Sbjct: 295 GQQPILNDALSYLDQVKVRFVEHPDVYNRFLDIMKDFKSQAIDTPGVIQRVSTLFNGHPT 354

Query: 100 LILGFNTFLPKGYEI 114
           LI GFNTFLP GY I
Sbjct: 355 LIQGFNTFLPPGYRI 369



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 39/78 (50%), Positives = 53/78 (67%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           + PVEF  AI++VNKIK RF     +YK FL+IL  Y++E+K I +VY +V  LF   PD
Sbjct: 558 RGPVEFNHAISYVNKIKNRFADSPEIYKQFLEILQTYQRESKPIQDVYAQVTVLFNSAPD 617

Query: 186 LLEEFTHFLPDSSGAASI 203
           LLE+F  FLP+S+  A +
Sbjct: 618 LLEDFKQFLPESAAQAKV 635



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 12/98 (12%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           ++P+   +A+++++++K RF     VY  FLDI+  ++ +      V Q V  LF  HP 
Sbjct: 296 QQPI-LNDALSYLDQVKVRFVEHPDVYNRFLDIMKDFKSQAIDTPGVIQRVSTLFNGHPT 354

Query: 186 LLEEFTHFLP----------DSSGAASIHYVPSGRNSI 213
           L++ F  FLP          D+  A  +   PSG N+I
Sbjct: 355 LIQGFNTFLPPGYRIECGPDDNPDAIRV-TTPSGTNTI 391



 Score = 47.8 bits (112), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 7/94 (7%)

Query: 24  EPSGQTQVVGGGGGGGAQKLTT-------NDALAYLKAVKDIFQDKREKYDDFLEVMKDF 76
           +P+     +G G   G Q   T       N A++Y+  +K+ F D  E Y  FLE+++ +
Sbjct: 535 QPATSLAGMGSGVLQGTQNEATRRGPVEFNHAISYVNKIKNRFADSPEIYKQFLEILQTY 594

Query: 77  KAQRIDTAGVIARVKELFKGHRDLILGFNTFLPK 110
           + +      V A+V  LF    DL+  F  FLP+
Sbjct: 595 QRESKPIQDVYAQVTVLFNSAPDLLEDFKQFLPE 628


>gi|320035956|gb|EFW17896.1| transcriptional repressor Sin3p [Coccidioides posadasii str.
           Silveira]
          Length = 1468

 Score =  135 bits (339), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 89/246 (36%), Positives = 131/246 (53%), Gaps = 23/246 (9%)

Query: 500 LDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMRKNQ 558
           ++L++C    PSYRLLPK       S R EL   VLND W S  T  SED  F   RKNQ
Sbjct: 691 VNLAHCRALGPSYRLLPKLERQKPCSGRDELCQSVLNDEWASHPTWASEDSGFVAHRKNQ 750

Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDG-------PIRVEDHF 611
           +E+SL R E+DR + D  +E+   T + +E LL++I   +I T+        P  +    
Sbjct: 751 HEDSLHRVEEDRHDYDHYIEAGIRTIQLMEALLQQI---SIMTESDRANFKLPPGLGGQS 807

Query: 612 TALNLRCIERLY-GDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEI 670
             +  + I+++Y  ++GL ++D L  N S  LP+++ RLKQK EEW   + ++ KVW E 
Sbjct: 808 ETIYKKVIKKVYDKEYGLRIIDELFANPSQVLPIVIARLKQKVEEWKLSQREWEKVWREQ 867

Query: 671 YSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVP 730
             K Y +SLDH+S   K+ D K+L  K   AE++   E+ R             RRS  P
Sbjct: 868 MQKGYWRSLDHQSSINKKDDKKTLTTKHFQAEVQAKFEEAR-----------ALRRSGFP 916

Query: 731 HLEFEY 736
            L +++
Sbjct: 917 VLSYQF 922



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 43/75 (57%), Positives = 51/75 (68%)

Query: 40  AQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRD 99
            Q+   NDAL+YL  VK  F +  + Y+ FL++MKDFK+Q IDT GVI RV  LF GH  
Sbjct: 137 GQQPILNDALSYLDQVKVRFVEHPDVYNRFLDIMKDFKSQAIDTPGVIQRVSTLFNGHPT 196

Query: 100 LILGFNTFLPKGYEI 114
           LI GFNTFLP GY I
Sbjct: 197 LIQGFNTFLPPGYRI 211



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 39/79 (49%), Positives = 53/79 (67%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           + PVEF  AI++VNKIK RF     +YK FL+IL  Y++E+K I +VY +V  LF   PD
Sbjct: 398 RGPVEFNHAISYVNKIKNRFADSPEIYKQFLEILQTYQRESKPIQDVYAQVTVLFNSAPD 457

Query: 186 LLEEFTHFLPDSSGAASIH 204
           LLE+F  FLP+S+  A + 
Sbjct: 458 LLEDFKQFLPESAAQAKVQ 476



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 1/70 (1%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           ++P+   +A+++++++K RF     VY  FLDI+  ++ +      V Q V  LF  HP 
Sbjct: 138 QQPI-LNDALSYLDQVKVRFVEHPDVYNRFLDIMKDFKSQAIDTPGVIQRVSTLFNGHPT 196

Query: 186 LLEEFTHFLP 195
           L++ F  FLP
Sbjct: 197 LIQGFNTFLP 206



 Score = 47.8 bits (112), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 7/94 (7%)

Query: 24  EPSGQTQVVGGGGGGGAQKLTT-------NDALAYLKAVKDIFQDKREKYDDFLEVMKDF 76
           +P+     +G G   G Q   T       N A++Y+  +K+ F D  E Y  FLE+++ +
Sbjct: 375 QPATSLAGMGSGVLQGTQNEATRRGPVEFNHAISYVNKIKNRFADSPEIYKQFLEILQTY 434

Query: 77  KAQRIDTAGVIARVKELFKGHRDLILGFNTFLPK 110
           + +      V A+V  LF    DL+  F  FLP+
Sbjct: 435 QRESKPIQDVYAQVTVLFNSAPDLLEDFKQFLPE 468


>gi|392585039|gb|EIW74380.1| hypothetical protein CONPUDRAFT_140506 [Coniophora puteana
           RWD-64-598 SS2]
          Length = 1296

 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 77/202 (38%), Positives = 121/202 (59%), Gaps = 9/202 (4%)

Query: 511 SYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYS-FKHMRKNQYEESLFRCED 568
           SYR +P + +    S R E+   VLND WVS  T  SED + F   RKN YEE+L R E+
Sbjct: 466 SYRRMPASEVNVPCSGRDEMCKSVLNDEWVSHPTWASEDTAGFVTQRKNVYEEALHRSEE 525

Query: 569 DRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPI-----RVEDHFTALNLRCIERLY 623
           +R E D  +E++  T   +E +  KI       D P+      +     +++ R I+++Y
Sbjct: 526 ERHEYDFHIEAIARTIALLEPIANKIAQ-LAPEDRPVFKLKANLGGQGKSIHARVIKKIY 584

Query: 624 G-DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHR 682
           G + GL+V+  +++N   A+PV++ RLKQK+EEW R + ++NKVW E+ ++NY +SLDH+
Sbjct: 585 GREAGLEVLQAMQENPVAAVPVVMHRLKQKEEEWKRAQREWNKVWREVDARNYARSLDHQ 644

Query: 683 SFYFKQQDSKSLGAKALSAEIK 704
              F+  D K++  KAL A+I+
Sbjct: 645 GITFRLADKKAVTTKALVAQIE 666



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 43/83 (51%), Positives = 56/83 (67%)

Query: 41  QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDL 100
           ++L   DAL+YL AVK  F  + + Y+ FL++MKDFK++ IDT GVI RV  LF GH +L
Sbjct: 22  RQLNVGDALSYLDAVKVRFSTQPDVYNHFLDIMKDFKSELIDTPGVIRRVSTLFHGHPEL 81

Query: 101 ILGFNTFLPKGYEITLPLEDEQP 123
           I GFNTFLP GY I   +   +P
Sbjct: 82  IQGFNTFLPVGYRIDCSMNPLEP 104



 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 46/88 (52%)

Query: 108 LPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENK 167
           +P   +I LP + +     + +   +A+++++ +K RF     VY  FLDI+  ++ E  
Sbjct: 3   IPLSRDIRLPTDADDGQLDRQLNVGDALSYLDAVKVRFSTQPDVYNHFLDIMKDFKSELI 62

Query: 168 SITEVYQEVEALFQDHPDLLEEFTHFLP 195
               V + V  LF  HP+L++ F  FLP
Sbjct: 63  DTPGVIRRVSTLFHGHPELIQGFNTFLP 90


>gi|400598182|gb|EJP65902.1| histone deacetylase complex protein [Beauveria bassiana ARSEF 2860]
          Length = 1431

 Score =  134 bits (337), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 98/303 (32%), Positives = 148/303 (48%), Gaps = 24/303 (7%)

Query: 490 DKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSED 548
           D   A P  ++ LSNC    PSYRLLPK   +   S R EL   VLND W S  T  SED
Sbjct: 658 DNRPAAPTDKISLSNCRGYGPSYRLLPKRERLKPCSGRDELCNSVLNDQWASHPTWASED 717

Query: 549 YSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVE 608
             F   RKN +EE L R E++R + D  +E+      +  +LLE I    +      R  
Sbjct: 718 SGFVAHRKNLFEEGLHRIEEERHDYDFYIEA----NLKCIQLLEPIAQQMLAMTPSERES 773

Query: 609 DHF--------TALNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCR 660
            H         T++  R  +++YG+ G+DV++ +  +    +PV+L R+KQK EEW   +
Sbjct: 774 FHMPGALVGQSTSIFKRICKKIYGERGIDVVNDMYSHPFDVVPVLLARMKQKDEEWRFSQ 833

Query: 661 SDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAI 720
            ++ KVW       + KSLDH     K  D ++L AK L   IK   E++R+E     A+
Sbjct: 834 REWEKVWHAQTENMHLKSLDHMGISVKATDKRNLTAKHLVDVIKTKHEEQRRER----AL 889

Query: 721 AAGNRRSIVPHLEFEYSDPDIHEDLYQLIK-YSC--GEMCTTEQLDKVMKIWTTFLEPML 777
                R       + +SD D   DL +L+  YS   G+  T E+ +++++ +  F+    
Sbjct: 890 KGKAPRH---QFAWNFSDKDAIMDLLRLMMLYSMHNGQHSTQEK-ERILEFFEMFIPAFF 945

Query: 778 GVP 780
            +P
Sbjct: 946 DLP 948



 Score =  103 bits (257), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 53/98 (54%), Positives = 65/98 (66%), Gaps = 4/98 (4%)

Query: 17  PMISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDF 76
           PM++    P G +Q+ GG   G  Q+   NDAL YL  VK  F D+ + Y+ FL++MKDF
Sbjct: 183 PMVNV--PPPGGSQIPGGITQG--QQPILNDALTYLDQVKVQFHDQPDVYNRFLDIMKDF 238

Query: 77  KAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEI 114
           K+Q IDT GVI RV ELF GH +LI GFNTFLP GY I
Sbjct: 239 KSQAIDTPGVINRVSELFAGHPNLIQGFNTFLPPGYRI 276



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 85/288 (29%), Positives = 125/288 (43%), Gaps = 39/288 (13%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           + PVEF  AI++VNKIK RFQ    +YK FL+IL  Y++E K I +VY +V  LF   PD
Sbjct: 398 RGPVEFNHAISYVNKIKNRFQDKPEIYKQFLEILQTYQREQKPIQDVYAQVTTLFNAAPD 457

Query: 186 LLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQVHVDKKERAMASHADRDLS 245
           LLE+F  FLP+++G A      +    +L   +   P AR     +K   + S A     
Sbjct: 458 LLEDFKQFLPETAGQAKAAA--ARAEDVLAGGAGQQPGARD---GQKMPPLGSFAPP--- 509

Query: 246 VDRPDPDHDRVLLKSDKDQRR-RGEKERERRDDHRRERERDDRDFENDVNRDFSMQRFPH 304
                         + KD++R R +K          E     R     VN      R  H
Sbjct: 510 ------------ASASKDKKRARNDKSAAGGVPLLAEVTSQPRLQAAAVNG--KRPRLSH 555

Query: 305 KRKSARKIEDSTAEPLHQGGEGDENFGMHPVSSSYDDKNAMKSMFSQELSFCEKVKDKL- 363
            R +A   + S+ EP            + PV           +   +E++F EKVK  L 
Sbjct: 556 ARGAA---DGSSIEPT-----------LTPVMPEPYPPRTSTTTSMEEIAFFEKVKKYLS 601

Query: 364 -RDDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLA 410
            R    EFL+  +L+++ +I R+ L       +   PDLM  +  F+ 
Sbjct: 602 NRSSMNEFLKLCNLFSQNVIDRNTLFHKGAVFINSNPDLMAFWKAFVG 649



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 39/65 (60%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFN 105
           N A++Y+  +K+ FQDK E Y  FLE+++ ++ ++     V A+V  LF    DL+  F 
Sbjct: 404 NHAISYVNKIKNRFQDKPEIYKQFLEILQTYQREQKPIQDVYAQVTTLFNAAPDLLEDFK 463

Query: 106 TFLPK 110
            FLP+
Sbjct: 464 QFLPE 468



 Score = 49.7 bits (117), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 21/70 (30%), Positives = 39/70 (55%), Gaps = 1/70 (1%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           ++P+   +A+ +++++K +F     VY  FLDI+  ++ +      V   V  LF  HP+
Sbjct: 203 QQPI-LNDALTYLDQVKVQFHDQPDVYNRFLDIMKDFKSQAIDTPGVINRVSELFAGHPN 261

Query: 186 LLEEFTHFLP 195
           L++ F  FLP
Sbjct: 262 LIQGFNTFLP 271


>gi|320588474|gb|EFX00943.1| transcription factor [Grosmannia clavigera kw1407]
          Length = 1671

 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 97/312 (31%), Positives = 155/312 (49%), Gaps = 29/312 (9%)

Query: 486  YSSKDKYL----AKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS 541
            Y+ +D+ +    A P   + LSNC    PSYRLLP+   +   S R EL   VLND W S
Sbjct: 753  YTGEDEIIENRPAPPSGRVSLSNCRGYGPSYRLLPRRERLKRCSGRDELCNSVLNDEWAS 812

Query: 542  -VTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIK 600
              T  SED  F   RKN YEE L R +++R + D  +E+     ++  +LLE +    + 
Sbjct: 813  HPTWASEDSGFVAHRKNGYEEGLHRIDEERHDYDFYIEA----NQKFIQLLEPLAQQMLT 868

Query: 601  TDG--------PIRVEDHFTALNLRCIERLYG-DHGLDVMDVLRKNASLALPVILTRLKQ 651
                       P  +    T++  R ++++YG D G++V + +  +   A+PVI+ RLKQ
Sbjct: 869  LSPSERENFRMPPGLGGQSTSIYKRVLKKVYGPDRGIEVANDMFSHPFAAVPVIMARLKQ 928

Query: 652  KQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKR 711
            K EEW   + ++ KVW       Y KSLDH     K  D ++L AK L   IK   E++R
Sbjct: 929  KDEEWRFSQREWEKVWMAQTEAMYLKSLDHMGIQVKSNDKRNLSAKHLVDLIKTKREEQR 988

Query: 712  KEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQ---LIKYSCGEMCTTEQLDKVMKI 768
            +      A A G++  +   L +++SD ++  DL +   L     G+    E+ +++ + 
Sbjct: 989  R------AAALGSKMPVYQFL-WDFSDREVVLDLLRFMVLYVLQSGQHGAAEK-ERITEF 1040

Query: 769  WTTFLEPMLGVP 780
            + TF+     +P
Sbjct: 1041 FETFVPQFFDLP 1052



 Score = 97.4 bits (241), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 45/81 (55%), Positives = 58/81 (71%)

Query: 40  AQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRD 99
            Q+   NDAL+YL  VK  F ++ + Y+ FL++MKDFK+Q IDT GVI+RV +LF GH +
Sbjct: 265 GQQPILNDALSYLDQVKVQFHEQPDVYNRFLDIMKDFKSQTIDTPGVISRVSDLFAGHPN 324

Query: 100 LILGFNTFLPKGYEITLPLED 120
           LI GFNTFLP GY I   LE+
Sbjct: 325 LIQGFNTFLPPGYRIECGLEN 345



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 41/76 (53%), Positives = 52/76 (68%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           + PVEF  AI++VNKIK RFQ    +YK FL+IL  Y++E K I EVY +V  LF   PD
Sbjct: 490 RGPVEFNHAISYVNKIKNRFQDKPEIYKQFLEILQTYQREQKPIQEVYAQVTTLFSGAPD 549

Query: 186 LLEEFTHFLPDSSGAA 201
           LLE+F  FLP+S+  A
Sbjct: 550 LLEDFKQFLPESAAHA 565



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 43/75 (57%)

Query: 36  GGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFK 95
           GG     +  N A++Y+  +K+ FQDK E Y  FLE+++ ++ ++     V A+V  LF 
Sbjct: 486 GGEKRGPVEFNHAISYVNKIKNRFQDKPEIYKQFLEILQTYQREQKPIQEVYAQVTTLFS 545

Query: 96  GHRDLILGFNTFLPK 110
           G  DL+  F  FLP+
Sbjct: 546 GAPDLLEDFKQFLPE 560



 Score = 49.7 bits (117), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 21/70 (30%), Positives = 40/70 (57%), Gaps = 1/70 (1%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           ++P+   +A+++++++K +F     VY  FLDI+  ++ +      V   V  LF  HP+
Sbjct: 266 QQPI-LNDALSYLDQVKVQFHEQPDVYNRFLDIMKDFKSQTIDTPGVISRVSDLFAGHPN 324

Query: 186 LLEEFTHFLP 195
           L++ F  FLP
Sbjct: 325 LIQGFNTFLP 334


>gi|241672926|ref|XP_002411489.1| sin3b, putative [Ixodes scapularis]
 gi|215504150|gb|EEC13644.1| sin3b, putative [Ixodes scapularis]
          Length = 1063

 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 92/258 (35%), Positives = 127/258 (49%), Gaps = 61/258 (23%)

Query: 47  DALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNT 106
           DAL+YL  VK  F ++ + Y+DFL++MK+FK+Q IDT GVI RV  LFKGH +LI+GFNT
Sbjct: 3   DALSYLDQVKFRFGNQPQVYNDFLDIMKEFKSQSIDTPGVIQRVSNLFKGHPELIVGFNT 62

Query: 107 FLPKGYE-------------------------ITLPLEDEQPPPKKP------------- 128
           FLP GY                          ITL        P  P             
Sbjct: 63  FLPPGYRIEVQANEQVNVSMPGSLSTTITAGGITLATTTSVAGPSAPGAAPSPAGPNAAP 122

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI----------TEVYQEVEA 178
                A +  +  K RFQG   +YK FL+IL+ Y+KE +++          +EVY +V  
Sbjct: 123 PPAPAASSPPSGTKNRFQGQPDIYKQFLEILHTYQKEQRNLKETGGKPLTESEVYAQVAK 182

Query: 179 LFQDHPDLLEEFTHFLPDSSGAASIHYVP----------SGRNSILRDRSSAMPTARQV- 227
           LFQ+  DLL+EF  FLPD++GA++    P          SG  S L+  S+  P  R + 
Sbjct: 183 LFQNQEDLLQEFGQFLPDANGASTHSLKPGSGLSKPSLVSGLGSSLKQGST--PLKRPLS 240

Query: 228 HVDKKERAMASHADRDLS 245
           H+   ++ M S  D  L+
Sbjct: 241 HLSGSKQKMTSLKDVTLA 258



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/227 (31%), Positives = 100/227 (44%), Gaps = 71/227 (31%)

Query: 352 ELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFL 409
           E +F +KV+  LR    Y+ FLRCL LY +EI++RSEL  LV   LG++P+L   F  F+
Sbjct: 268 EFAFFDKVRRALRGQEVYENFLRCLILYNQEIVSRSELVHLVTPFLGKFPELFKWFKDFI 327

Query: 410 ARCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREARE-KDRL 468
                                                       G KD   +     +++
Sbjct: 328 --------------------------------------------GYKDLGGQVEPIPNKV 343

Query: 469 DKSVAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRT 528
            +S +F        ++ YSS  +Y A            R  P   + PK       S RT
Sbjct: 344 RRSFSF--------LADYSSCKRYGAS----------YRALPKNIVQPK------CSGRT 379

Query: 529 ELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDM 575
           +L  EVLND WVS  S SED +F   RK QYEE ++RCED+RFE+ +
Sbjct: 380 QLCKEVLNDTWVSFPSWSEDSTFVSSRKTQYEEYIYRCEDERFEVGL 426



 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 23/64 (35%), Positives = 39/64 (60%)

Query: 132 EEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFT 191
           E+A+++++++K RF     VY  FLDI+  ++ ++     V Q V  LF+ HP+L+  F 
Sbjct: 2   EDALSYLDQVKFRFGNQPQVYNDFLDIMKEFKSQSIDTPGVIQRVSNLFKGHPELIVGFN 61

Query: 192 HFLP 195
            FLP
Sbjct: 62  TFLP 65


>gi|403168464|ref|XP_003889725.1| hypothetical protein PGTG_21572 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
 gi|375167512|gb|EHS63440.1| hypothetical protein PGTG_21572 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
          Length = 1520

 Score =  133 bits (335), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 86/268 (32%), Positives = 145/268 (54%), Gaps = 18/268 (6%)

Query: 508 CTPSYRLLPKNYLIPSASQRTELGAEVLNDHWV--SVTSGSEDYSFKHMRKNQYEESLFR 565
           C PSYR+LP + L  + S R  L  +VLND  +  +  +  ++  F   + N +E +L++
Sbjct: 695 CGPSYRILPDSQLASNCSGRDALCWDVLNDKLICGAPATNEDEQIFLPRQTNAFERALYQ 754

Query: 566 CEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFT--------ALNLR 617
            ED+R E D  +E+ NV   R   LLE IN    + D   R E            ++  R
Sbjct: 755 AEDERHEYDYHIEA-NV---RTIALLEPINLRIQQMDPETRAEYRLKPGLGGQSKSVYQR 810

Query: 618 CIERLYG-DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYH 676
            I+++YG   G +V+  L +N +LA+P++L RLKQK EEW +   D+N+VW E+  KNY 
Sbjct: 811 IIKKIYGKQQGQEVIQALHENPTLAVPIVLARLKQKDEEWKKALRDWNRVWREVDGKNYW 870

Query: 677 KSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPH-LEFE 735
           K+LDH+   FK  D K +G + L +EI+ I  +++++  +LL  +    R +  H LE +
Sbjct: 871 KALDHQGISFKAVDKKMIGNRNLVSEIELIKREQQQKQKLLLNPSM--IRFLPKHQLELQ 928

Query: 736 YSDPDIHEDLYQLIKYSCGEMCTTEQLD 763
             + ++  D+ +++ +    +  +  LD
Sbjct: 929 LQNVEVFYDVLKILIHFLDHVSNSTGLD 956



 Score = 97.4 bits (241), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 43/82 (52%), Positives = 55/82 (67%)

Query: 120 DEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEAL 179
           D+  PP KP+EF  AI +VNKIK R+  D   Y++FLDIL  Y+++ + I EVY++V  L
Sbjct: 276 DQSKPPIKPLEFNHAITYVNKIKNRYASDPKTYQTFLDILQTYQRDARPIQEVYEQVNQL 335

Query: 180 FQDHPDLLEEFTHFLPDSSGAA 201
           F   PDLL EF  FLPD SG A
Sbjct: 336 FSGAPDLLTEFMQFLPDPSGNA 357



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 49/101 (48%), Positives = 57/101 (56%), Gaps = 4/101 (3%)

Query: 18  MISSRGEPSGQTQVVGGGGGGGAQK----LTTNDALAYLKAVKDIFQDKREKYDDFLEVM 73
           + SS    S Q Q +       +Q     L   DAL+YL  VK  FQD    Y+ FL++M
Sbjct: 50  VTSSLAALSSQPQNLASSSNSTSQNKYRPLNVRDALSYLDQVKVQFQDFPGVYNKFLDIM 109

Query: 74  KDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEI 114
           KDFK Q IDT GVI  V  LF+GH  LI GFNTFLP GY I
Sbjct: 110 KDFKTQMIDTPGVIDGVSSLFRGHPSLIQGFNTFLPPGYRI 150



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 68/302 (22%), Positives = 115/302 (38%), Gaps = 47/302 (15%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDL 186
           +P+   +A+++++++K +FQ    VY  FLDI+  ++ +      V   V +LF+ HP L
Sbjct: 77  RPLNVRDALSYLDQVKVQFQDFPGVYNKFLDIMKDFKTQMIDTPGVIDGVSSLFRGHPSL 136

Query: 187 LEEFTHFLPD------SSGAASIHYVPSGRNSILR-DRSSAMPTARQVHVDKKERAMASH 239
           ++ F  FLP       S G        S   SI+       + T ++V +      + SH
Sbjct: 137 IQGFNTFLPPGYRIDVSQGEGPNQTGNSSAYSIITVTHPMGIQTQKRVPLQTGGEEIGSH 196

Query: 240 ADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERRDDHRRERERDDRDFENDVNRDFSM 299
              + +   P                                 E+  R+  N VN     
Sbjct: 197 VVPESAAPLPP----------------------------ASTSEQPTRENLNAVNSANPS 228

Query: 300 QRF-PHKRKSARKIEDSTA---EPLHQGGEGDENFGMHPVSSSY----DDKNAMKSM-FS 350
             F P K  +   +    A   +P+      + N    PV SS       K  +K + F+
Sbjct: 229 NHFAPQKSLNEPPLPPVVALKPKPITLDVIANLNRNPSPVPSSNLSTDQSKPPIKPLEFN 288

Query: 351 QELSFCEKVKDKLRDD---YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNG 407
             +++  K+K++   D   YQ FL  L  Y ++     E+   V  L    PDL+  F  
Sbjct: 289 HAITYVNKIKNRYASDPKTYQTFLDILQTYQRDARPIQEVYEQVNQLFSGAPDLLTEFMQ 348

Query: 408 FL 409
           FL
Sbjct: 349 FL 350



 Score = 41.6 bits (96), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 2/80 (2%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
           L  N A+ Y+  +K+ +    + Y  FL++++ ++        V  +V +LF G  DL+ 
Sbjct: 285 LEFNHAITYVNKIKNRYASDPKTYQTFLDILQTYQRDARPIQEVYEQVNQLFSGAPDLLT 344

Query: 103 GFNTFL--PKGYEITLPLED 120
            F  FL  P G    LP  D
Sbjct: 345 EFMQFLPDPSGNAGQLPATD 364


>gi|444320465|ref|XP_004180889.1| hypothetical protein TBLA_0E03160 [Tetrapisispora blattae CBS 6284]
 gi|387513932|emb|CCH61370.1| hypothetical protein TBLA_0E03160 [Tetrapisispora blattae CBS 6284]
          Length = 1739

 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 100/302 (33%), Positives = 145/302 (48%), Gaps = 20/302 (6%)

Query: 486  YSSKDKYLAKPIQE---LDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS- 541
            Y  K K++   + E   LDL  CE C PSY+ LPK   +   S R E+  E+LND WV  
Sbjct: 921  YVEKPKHIENIVHEKHKLDLDLCEACGPSYKKLPKTDTLMPCSGRDEMCWEILNDEWVGH 980

Query: 542  VTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKT 601
                SED  F   RK   ++   R +    E D  +ES   T + +E +  KI N T   
Sbjct: 981  PVWASEDSGFIAHRKINTKKPYLRLKKKVHEYDFYIESNLRTIQTLETIASKIANMTENE 1040

Query: 602  DGPIRVED---HFTA-LNLRCIERLY-GDHGLDVMDVLRKNASLALPVILTRLKQKQEEW 656
                ++ D   H T+ +  + I ++Y  + G +++D L +  ++A+PV+L RLKQK EEW
Sbjct: 1041 KCNFKLPDGLGHTTSTIYKKVIRKVYDKERGFEIIDALHEYPAIAVPVVLKRLKQKDEEW 1100

Query: 657  ARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDV 716
             R + ++NKVW E+  K + KSLDH    FKQ D K L  K L   I EIS  K  +   
Sbjct: 1101 RRAQREWNKVWRELEQKVFFKSLDHLGLTFKQADKKLLTTKQL---ISEISSIKVDQTHK 1157

Query: 717  LLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLIKYSCGEMCT-----TEQLDKVMKIWTT 771
             +       +S    L+F   D DI  D+   ++       T      E+L   MK +T+
Sbjct: 1158 RMHWLTPKPKS---QLDFNLPDKDIIFDILSFVEIFVEHTSTYSNPEKERLIDFMKYFTS 1214

Query: 772  FL 773
              
Sbjct: 1215 LF 1216



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 41/71 (57%), Positives = 52/71 (73%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           VEF +AI++VNKIK RF    ++YK FL+IL  Y++E K I EVY +V  LFQ+ PDLLE
Sbjct: 543 VEFSQAISYVNKIKNRFANQPYIYKHFLEILQTYQREQKPINEVYSQVTVLFQEAPDLLE 602

Query: 189 EFTHFLPDSSG 199
           +F  FLPDSS 
Sbjct: 603 DFKKFLPDSSA 613



 Score = 89.4 bits (220), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 41/72 (56%), Positives = 51/72 (70%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
           L   DAL+YL+ VK  F  + + Y+ FL++MKDFK+Q IDT GVIARV  LF  +  LI 
Sbjct: 302 LNVKDALSYLEQVKFQFNSRPDVYNHFLDIMKDFKSQAIDTPGVIARVSSLFHDYPSLIQ 361

Query: 103 GFNTFLPKGYEI 114
           GFNTFLP+GY I
Sbjct: 362 GFNTFLPQGYRI 373



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 44/79 (55%), Gaps = 3/79 (3%)

Query: 117 PLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEV 176
           P ED Q    +P+  ++A++++ ++K +F     VY  FLDI+  ++ +      V   V
Sbjct: 293 PKEDNQ---YRPLNVKDALSYLEQVKFQFNSRPDVYNHFLDIMKDFKSQAIDTPGVIARV 349

Query: 177 EALFQDHPDLLEEFTHFLP 195
            +LF D+P L++ F  FLP
Sbjct: 350 SSLFHDYPSLIQGFNTFLP 368


>gi|331230850|ref|XP_003328089.1| paired amphipathic helix protein Sin3a [Puccinia graminis f. sp.
           tritici CRL 75-36-700-3]
          Length = 1963

 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 86/268 (32%), Positives = 145/268 (54%), Gaps = 18/268 (6%)

Query: 508 CTPSYRLLPKNYLIPSASQRTELGAEVLNDHWV--SVTSGSEDYSFKHMRKNQYEESLFR 565
           C PSYR+LP + L  + S R  L  +VLND  +  +  +  ++  F   + N +E +L++
Sbjct: 722 CGPSYRILPDSQLASNCSGRDALCWDVLNDKLICGAPATNEDEQIFLPRQTNAFERALYQ 781

Query: 566 CEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFT--------ALNLR 617
            ED+R E D  +E+ NV   R   LLE IN    + D   R E            ++  R
Sbjct: 782 AEDERHEYDYHIEA-NV---RTIALLEPINLRIQQMDPETRAEYRLKPGLGGQSKSVYQR 837

Query: 618 CIERLYG-DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYH 676
            I+++YG   G +V+  L +N +LA+P++L RLKQK EEW +   D+N+VW E+  KNY 
Sbjct: 838 IIKKIYGKQQGQEVIQALHENPTLAVPIVLARLKQKDEEWKKALRDWNRVWREVDGKNYW 897

Query: 677 KSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPH-LEFE 735
           K+LDH+   FK  D K +G + L +EI+ I  +++++  +LL  +    R +  H LE +
Sbjct: 898 KALDHQGISFKAVDKKMIGNRNLVSEIELIKREQQQKQKLLLNPSM--IRFLPKHQLELQ 955

Query: 736 YSDPDIHEDLYQLIKYSCGEMCTTEQLD 763
             + ++  D+ +++ +    +  +  LD
Sbjct: 956 LQNVEVFYDVLKILIHFLDHVSNSTGLD 983



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 43/82 (52%), Positives = 55/82 (67%)

Query: 120 DEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEAL 179
           D+  PP KP+EF  AI +VNKIK R+  D   Y++FLDIL  Y+++ + I EVY++V  L
Sbjct: 303 DQSKPPIKPLEFNHAITYVNKIKNRYASDPKTYQTFLDILQTYQRDARPIQEVYEQVNQL 362

Query: 180 FQDHPDLLEEFTHFLPDSSGAA 201
           F   PDLL EF  FLPD SG A
Sbjct: 363 FSGAPDLLTEFMQFLPDPSGNA 384



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 40/101 (39%), Positives = 47/101 (46%), Gaps = 19/101 (18%)

Query: 18  MISSRGEPSGQTQVVGGGGGGGAQK----LTTNDALAYLKAVKDIFQDKREKYDDFLEVM 73
           + SS    S Q Q +       +Q     L   DAL+YL  VK  FQD    Y+ FL++M
Sbjct: 92  VTSSLAALSSQPQNLASSSNSTSQNKYRPLNVRDALSYLDQVKVQFQDFPGVYNKFLDIM 151

Query: 74  KDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEI 114
           KDFK Q                GH  LI GFNTFLP GY I
Sbjct: 152 KDFKTQ---------------IGHPSLIQGFNTFLPPGYRI 177



 Score = 41.6 bits (96), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 2/82 (2%)

Query: 41  QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDL 100
           + L  N A+ Y+  +K+ +    + Y  FL++++ ++        V  +V +LF G  DL
Sbjct: 310 KPLEFNHAITYVNKIKNRYASDPKTYQTFLDILQTYQRDARPIQEVYEQVNQLFSGAPDL 369

Query: 101 ILGFNTFL--PKGYEITLPLED 120
           +  F  FL  P G    LP  D
Sbjct: 370 LTEFMQFLPDPSGNAGQLPATD 391


>gi|170085661|ref|XP_001874054.1| histone deacetylase complex, SIN3 component [Laccaria bicolor
           S238N-H82]
 gi|164651606|gb|EDR15846.1| histone deacetylase complex, SIN3 component [Laccaria bicolor
           S238N-H82]
          Length = 1281

 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 81/211 (38%), Positives = 127/211 (60%), Gaps = 7/211 (3%)

Query: 510 PSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMRKNQYEESLFRCED 568
           PSYR L  + +  + S R EL   VLND WVS  T  SE+  F   +KN +EE+L + E+
Sbjct: 574 PSYRRLLDSEVRLACSGRDELCRSVLNDVWVSHPTWASEEAQFVAHKKNSFEEALHKSEE 633

Query: 569 DRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TALNLRCIERLYG 624
           +R E  + +E++  T   +E L  +I + T +     +++  F     ++  R I+R+YG
Sbjct: 634 ERHEYHVQIEALTRTIAVLEPLSARIEDMTNEERSLFKLKSDFGGAGKSIYHRMIKRVYG 693

Query: 625 -DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRS 683
            D GL+++  L+   S+A+PV+L RLKQK EEW R + ++++ W E+ SKN++KSLDH+ 
Sbjct: 694 KDSGLEIIQALQDCPSVAVPVVLARLKQKDEEWRRAQREWSRTWREVDSKNFYKSLDHQG 753

Query: 684 FYFKQQDSKSLGAKALSAEIKEI-SEKKRKE 713
             FKQ D K++ AK    +I+ I SE+  KE
Sbjct: 754 ISFKQNDKKNITAKYFVGDIEAIKSEQLSKE 784



 Score = 95.9 bits (237), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 47/81 (58%), Positives = 56/81 (69%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
           L   DAL+YL AVK  FQDK E Y+ FL++MKDFK+Q IDT GVI RV  LF G+  LI 
Sbjct: 92  LNVTDALSYLDAVKMQFQDKPEVYNQFLDIMKDFKSQVIDTPGVIQRVSMLFNGNPYLIQ 151

Query: 103 GFNTFLPKGYEITLPLEDEQP 123
           GFNTFLP GY I + ++   P
Sbjct: 152 GFNTFLPLGYRIDISVDPLDP 172



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 83/301 (27%), Positives = 137/301 (45%), Gaps = 49/301 (16%)

Query: 117 PLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI--TEVYQ 174
           P  ++QPP     EF  AI ++NKIK R+  D + YK FLDIL  Y+KE K +  ++VY 
Sbjct: 272 PTVEKQPP----GEFNHAIQYLNKIKARYSEDPNTYKQFLDILQTYQKEQKHLQDSQVYV 327

Query: 175 EVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMP-----TARQVHV 229
           +V+ LF++  DLL EF  FLP++ G      VPS    +     ++ P     ++  V V
Sbjct: 328 QVQTLFKNDQDLLAEFKDFLPEAVGGGGGPSVPSVVPQVPAAGPASWPQPEASSSSPVAV 387

Query: 230 DKKERAMASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERRDDHRRERERDDRDF 289
             K+   AS   + +    P P     ++ S     R+ +K + + +      +     F
Sbjct: 388 PAKKSTQASKRKKRVVEKEPTPAPPTKVVPS-----RQTKKTKLQHNP-----DTGSPAF 437

Query: 290 ENDVNRDFSMQRFPHKRKSARKIEDSTAEPLHQGGEGDENFGMHPVSSSYDDKNAMKSMF 349
              V    S  ++PH   + +     +   LH  G        H  ++S D         
Sbjct: 438 SPYVA-PHSPPQYPHATSALQSHHIQSQPSLHLPG--------HSGNASAD--------- 479

Query: 350 SQELSFCEKVKDKL--RDDYQEFLRCLHLYTKEI------ITRSELQSLVGDLLGRYPDL 401
             +L F ++ K  L  R+ Y+EFL+ L L++K+I      I R+ +    G+L+  + DL
Sbjct: 480 --KLLFFDRAKKSLENREVYEEFLKLLGLFSKDIFDVNTLIERTRVFLGDGELMSEFKDL 537

Query: 402 M 402
           +
Sbjct: 538 V 538



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 39/69 (56%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDL 186
           +P+   +A+++++ +K +FQ    VY  FLDI+  ++ +      V Q V  LF  +P L
Sbjct: 90  RPLNVTDALSYLDAVKMQFQDKPEVYNQFLDIMKDFKSQVIDTPGVIQRVSMLFNGNPYL 149

Query: 187 LEEFTHFLP 195
           ++ F  FLP
Sbjct: 150 IQGFNTFLP 158



 Score = 41.6 bits (96), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 19/68 (27%), Positives = 38/68 (55%), Gaps = 2/68 (2%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQR--IDTAGVIARVKELFKGHRDLILG 103
           N A+ YL  +K  + +    Y  FL++++ ++ ++  +  + V  +V+ LFK  +DL+  
Sbjct: 283 NHAIQYLNKIKARYSEDPNTYKQFLDILQTYQKEQKHLQDSQVYVQVQTLFKNDQDLLAE 342

Query: 104 FNTFLPKG 111
           F  FLP+ 
Sbjct: 343 FKDFLPEA 350


>gi|452979844|gb|EME79606.1| hypothetical protein MYCFIDRAFT_204881 [Pseudocercospora fijiensis
            CIRAD86]
          Length = 1463

 Score =  133 bits (334), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 124/435 (28%), Positives = 194/435 (44%), Gaps = 45/435 (10%)

Query: 496  PIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHM 554
            P   + LSNC    PSYRLLPK       S R EL   VLND W S  T  SED  F   
Sbjct: 678  PSGRVMLSNCRGLGPSYRLLPKRERQKPCSGRDELCNSVLNDDWASHPTWASEDSGFIAH 737

Query: 555  RKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDG--------PIR 606
            RKN +EE L R E++R + D  +E+      R  +LLE I     + D         P  
Sbjct: 738  RKNVHEEGLHRIEEERHDYDFNIEAA----ARTVQLLEPIATQLRRMDDLAQRNYQLPPG 793

Query: 607  VEDHFTALNLRCIERLYG-DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNK 665
            +      +  R I ++YG + G +V++ L       +PV+L R+K++ E W   + ++ K
Sbjct: 794  LGGQSETIYKRIIMKIYGREKGQEVINSLHHQPFQVIPVLLNRIKERLESWKMAQREWEK 853

Query: 666  VWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNR 725
            VW E   K + KSLDH++   KQ D ++  AK L  EI+   E+ +++ + L  +     
Sbjct: 854  VWREQTQKMFWKSLDHQAAQAKQMDRRAFQAKTLQGEIQVRYEEMKRQSNNLPGVMRE-- 911

Query: 726  RSIVPHLEFEYSDPDIHEDLYQLIKYSCGEMCTTEQLDKVMKIWTTFLEPMLGVPS---- 781
                P LEF   D ++  D   LI     ++       K++     F+    G+ +    
Sbjct: 912  ----PQLEFSIVDNEVLVDATHLILVHIEQVQLQTDHPKLVDFIKDFVPLFFGLDNAAFR 967

Query: 782  -----RPQGAEDTEDVVKAKSHTVKSRAASVGDSDGSPD-GD---AAAMTSKHSNPSRNG 832
                 R + +   ++++     T     AS+G   G+   GD   AA   S+   P R+G
Sbjct: 968  KEIELRSENSALGDELLSGGEET-----ASIGSRKGNGKIGDLRRAALDPSRGRKPKRDG 1022

Query: 833  DESIPPEQSSSSRAWLPNGDHGIKED-VSVEADHNA-RKSDNFCDSSEQDKVQNNAAMAD 890
            D +     +S+SRA  P+    I  D ++VE   +   K+D   +   +  V+NN    +
Sbjct: 1023 DSN-----ASASRASTPDVASNIDPDEMAVETTEDVENKADVSTNRWFEHPVENNILSGE 1077

Query: 891  ETSGISKQASTNERL 905
              + +  QA    RL
Sbjct: 1078 NVNPLEPQARNTYRL 1092



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 40/69 (57%), Positives = 50/69 (72%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFN 105
           NDAL+YL  VK  F +  + Y+ FL++MKDFK+  IDT GVI RV +LF G+ +LI GFN
Sbjct: 176 NDALSYLDQVKVQFAEHPDVYNRFLDIMKDFKSGAIDTPGVIGRVSQLFAGNPELIQGFN 235

Query: 106 TFLPKGYEI 114
           TFLP GY I
Sbjct: 236 TFLPPGYRI 244



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 38/72 (52%), Positives = 51/72 (70%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           + PVEF  AI++VNKIK RF     +YK FL+IL  Y++E+K I +VY +V  LF+  PD
Sbjct: 391 RGPVEFNHAISYVNKIKNRFASQPDIYKQFLEILQTYQRESKPIQDVYGQVTHLFKTAPD 450

Query: 186 LLEEFTHFLPDS 197
           LLE+F  FLP+S
Sbjct: 451 LLEDFKQFLPES 462



 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 67/307 (21%), Positives = 116/307 (37%), Gaps = 50/307 (16%)

Query: 131 FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEF 190
             +A+++++++K +F     VY  FLDI+  ++        V   V  LF  +P+L++ F
Sbjct: 175 LNDALSYLDQVKVQFAEHPDVYNRFLDIMKDFKSGAIDTPGVIGRVSQLFAGNPELIQGF 234

Query: 191 THFLPDSSGAASIHYVPSGRN---SILRDRS------SAMPTARQVHVDKKERAMASHAD 241
             FLP        + +  G+    +++R  +      S MPTAR +             +
Sbjct: 235 NTFLPPG------YRIECGQGDDPNVIRVTTPMGTTVSNMPTARPLSRQDGPHDGTRPTN 288

Query: 242 RDLSVDRPDPDHDRVLLKSDKDQRRRGE----------------KERERRDDHRRERERD 285
              +   P P      +      R  G                 ++RE+   H  + ER 
Sbjct: 289 GTFT---PQPGSHSAQMAYSPSGRPVGPVASAQQHHLSPLDAAARQREQEAMHAIQ-ERG 344

Query: 286 DRDFENDVNRDFSMQRFPHKRKSARKIEDSTAEPLHQGGEGDENFGMHPVSSSYDDKNAM 345
               +N V+    M          R      A PL   G+GD       +  +  DK   
Sbjct: 345 VNSLQNAVSAATGM-------AGIRAGISPRATPLP--GQGD---AAGAIDGAGLDKQRG 392

Query: 346 KSMFSQELSFCEKVKDKLR---DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLM 402
              F+  +S+  K+K++     D Y++FL  L  Y +E     ++   V  L    PDL+
Sbjct: 393 PVEFNHAISYVNKIKNRFASQPDIYKQFLEILQTYQRESKPIQDVYGQVTHLFKTAPDLL 452

Query: 403 DGFNGFL 409
           + F  FL
Sbjct: 453 EDFKQFL 459



 Score = 50.1 bits (118), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 5/100 (5%)

Query: 16  RPMISSRGEP-SGQTQVVGGGGGGGAQK----LTTNDALAYLKAVKDIFQDKREKYDDFL 70
           R  IS R  P  GQ    G   G G  K    +  N A++Y+  +K+ F  + + Y  FL
Sbjct: 362 RAGISPRATPLPGQGDAAGAIDGAGLDKQRGPVEFNHAISYVNKIKNRFASQPDIYKQFL 421

Query: 71  EVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPK 110
           E+++ ++ +      V  +V  LFK   DL+  F  FLP+
Sbjct: 422 EILQTYQRESKPIQDVYGQVTHLFKTAPDLLEDFKQFLPE 461


>gi|2829875|gb|AAC00583.1| Hypothetical protein [Arabidopsis thaliana]
          Length = 266

 Score =  132 bits (332), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 70/165 (42%), Positives = 107/165 (64%), Gaps = 9/165 (5%)

Query: 44  TTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILG 103
           T +D  +Y+ ++K+ F+D+  KY  FLE++ D+ A+R+D    +AR+ EL K HR+L+LG
Sbjct: 83  TFHDVRSYIYSLKESFRDEPAKYAQFLEILNDYSARRVDAPSAVARMTELMKDHRNLVLG 142

Query: 104 FNTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDD-HVYKSFLDILNMY 162
           F+  L  G   T PLE E P   K +      NF++K+K RFQG+D HVY+SFL+IL MY
Sbjct: 143 FSVLLSTGDTKTTPLEAE-PDNNKRI---RVANFISKLKARFQGNDGHVYESFLEILTMY 198

Query: 163 RKENKSITEVYQE----VEALFQDHPDLLEEFTHFLPDSSGAASI 203
           ++ NKS+ ++YQE    V AL Q H DL+ EF++    ++G + +
Sbjct: 199 QQGNKSVNDLYQEVGFLVVALLQGHEDLVMEFSNVFKRTTGPSGL 243



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/160 (31%), Positives = 81/160 (50%), Gaps = 16/160 (10%)

Query: 36  GGGGAQKLTTNDALAYLKAVKDIF-QDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELF 94
           GG  +   T ++A +Y+ AVK+ F  D+  KY +FL++M D +A R+D A V+ R++EL 
Sbjct: 3   GGSLSPAFTIDEATSYINAVKEAFGADQPAKYREFLDIMLDLRANRVDLATVVPRMRELL 62

Query: 95  KGHRDLILGFNTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKS 154
           K H +L+L FN FLP   + T               F +  +++  +K  F+ +   Y  
Sbjct: 63  KDHVNLLLRFNAFLPAEAKET---------------FHDVRSYIYSLKESFRDEPAKYAQ 107

Query: 155 FLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFL 194
           FL+ILN Y             +  L +DH +L+  F+  L
Sbjct: 108 FLEILNDYSARRVDAPSAVARMTELMKDHRNLVLGFSVLL 147



 Score = 40.4 bits (93), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 1/65 (1%)

Query: 132 EEAINFVNKIKTRFQGDDHV-YKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEF 190
           +EA +++N +K  F  D    Y+ FLDI+   R     +  V   +  L +DH +LL  F
Sbjct: 13  DEATSYINAVKEAFGADQPAKYREFLDIMLDLRANRVDLATVVPRMRELLKDHVNLLLRF 72

Query: 191 THFLP 195
             FLP
Sbjct: 73  NAFLP 77


>gi|213406527|ref|XP_002174035.1| transcriptional regulatory protein SIN3 [Schizosaccharomyces
           japonicus yFS275]
 gi|212002082|gb|EEB07742.1| transcriptional regulatory protein SIN3 [Schizosaccharomyces
           japonicus yFS275]
          Length = 1602

 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 104/347 (29%), Positives = 172/347 (49%), Gaps = 31/347 (8%)

Query: 496 PIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHM 554
           P   +DL+ C+   PSYRLLPK  L+     R +L   VLND WVS  T  SED  F   
Sbjct: 582 PRPRVDLTKCKANGPSYRLLPKIELLLPCKGRDDLCWSVLNDAWVSHPTLASEDSGFIAH 641

Query: 555 RKNQYEESLFRCEDDRFELDM----------LLESVNVTTKRVEELLEKINNNTIKTDGP 604
           RKNQYEE+L + E++R+E D           LLES N+T +++ +      +   K   P
Sbjct: 642 RKNQYEEALHKLEEERYEYDRHILANLRTIELLESHNLTMQKMAK------SERSKWKLP 695

Query: 605 IRVEDHFTALNLRCIERLYG-DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDF 663
             +     ++  + I ++YG + G +V+  L++  ++ + V+L RLK K EEW   +  +
Sbjct: 696 DNLGGPSPSIYRKSIRKVYGKEKGDEVIKHLQEEPAITIGVVLQRLKAKDEEWRATQRKW 755

Query: 664 NKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAG 723
           NKVW  I +KN+ +SLDH+  +FK  D ++   K L A+++ I+ ++++E +    +A  
Sbjct: 756 NKVWNGIEAKNFLRSLDHQGIFFKTTDKRNTTTKFLIADLRNIAHQQKEEQEDPSPLAQP 815

Query: 724 NRRSIVPHLEFEYSDPDIHEDLYQL--IKYSCGEMCTTEQLDKVMKIWTTFLEPMLGVPS 781
                  H +  ++D  +  D  +L  I    G   + E  +K+     +FL     +P 
Sbjct: 816 Y------HYDMPFNDLLVIVDAARLLGIYLESGSNHSAEDREKMSNFLRSFLSLFFDIPY 869

Query: 782 RPQGAEDTEDVVKAKSHTVKSRAASVGDSDGSPDGDAAAMTSKHSNP 828
               A     V+ A      S ++    +  SP   A+A +S+ S+P
Sbjct: 870 ASLVA-----VLPATFSDEASDSSVSTPASPSPLNPASAESSRPSSP 911



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 80/288 (27%), Positives = 123/288 (42%), Gaps = 61/288 (21%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           K+  + + AINFVN +K RF     VY  FL+IL  Y+  ++ I  V QE+ +LF + PD
Sbjct: 341 KQAADLDHAINFVNNVKNRFAHQPEVYNKFLEILQSYQNGSRPIRSVLQEITSLFANSPD 400

Query: 186 LLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSA-MPTARQVHVDKKERAMASHADRDL 244
           LLE+F  FLPD S   +    P      + DR +A M TA      ++   +++     L
Sbjct: 401 LLEDFKRFLPDVSATEAASPAPPP----MTDRMAAPMETA-----PREATPVSTTTSSAL 451

Query: 245 -SVDRPDPDHDRVLLKSDKDQRRRGEKERERRDDHRRERERDDRDFENDVNRDFSMQRFP 303
             V +  P       K    ++RR E     R   +R R     D   +V + FS+    
Sbjct: 452 PPVGKFTP---LSTTKQPASEKRRAETSVHTRSQTKRTRSAAAND--ANVFKAFSV---- 502

Query: 304 HKRKSARKIEDSTAEPLHQGGEGDENFGMHPVSSSYDDKNAMKSMFSQELSFCEKVKDKL 363
                                         PVS   ++KN       +EL+F E+ + ++
Sbjct: 503 ------------------------------PVS---ENKNP------EELAFLEQARQEI 523

Query: 364 RDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFL 409
            D+  Y EFL+ L LY++E+  R+ L       LG+   L + F   L
Sbjct: 524 VDEVRYNEFLKLLDLYSQEVFDRNALVERSEPFLGKNEALFNTFKQML 571



 Score = 86.3 bits (212), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 40/72 (55%), Positives = 52/72 (72%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
           L  +DAL+YL  VK  F  + E Y++FL++MK+FK+Q I+T  VIARV  LF G+ +LI 
Sbjct: 165 LNVSDALSYLDLVKMQFNHEPEIYNEFLDIMKEFKSQAIETPEVIARVSRLFCGYPNLIQ 224

Query: 103 GFNTFLPKGYEI 114
           GFNTFLP GY I
Sbjct: 225 GFNTFLPPGYRI 236



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 44/80 (55%), Gaps = 4/80 (5%)

Query: 116 LPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQE 175
           LP+  E     +P+   +A+++++ +K +F  +  +Y  FLDI+  ++ +     EV   
Sbjct: 156 LPVNTEH----RPLNVSDALSYLDLVKMQFNHEPEIYNEFLDIMKEFKSQAIETPEVIAR 211

Query: 176 VEALFQDHPDLLEEFTHFLP 195
           V  LF  +P+L++ F  FLP
Sbjct: 212 VSRLFCGYPNLIQGFNTFLP 231


>gi|171687219|ref|XP_001908550.1| hypothetical protein [Podospora anserina S mat+]
 gi|170943571|emb|CAP69223.1| unnamed protein product [Podospora anserina S mat+]
          Length = 1552

 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 80/227 (35%), Positives = 119/227 (52%), Gaps = 14/227 (6%)

Query: 496 PIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHM 554
           P  ++ LSNC    PSYRLLP+   +   + R EL   VLND W S  T  SED  F   
Sbjct: 770 PTGKVSLSNCRGFGPSYRLLPRRERLKPCTGRDELCQSVLNDEWASHPTWASEDSGFVAH 829

Query: 555 RKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDG--------PIR 606
           RKN YEE L R E++R + D  +E+     ++  +LLE I ++ +            P+ 
Sbjct: 830 RKNAYEEGLHRIEEERHDYDFFIEA----NQKCIQLLEPIAHSMLNMPASERHNFTMPVG 885

Query: 607 VEDHFTALNLRCIERLYG-DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNK 665
           +    T++  R ++++YG + G +V + L +N    +P++L RLKQK EEW   + ++ K
Sbjct: 886 LGGQSTSIYKRVLKKIYGPEKGCEVANDLFRNPYAVVPIVLARLKQKDEEWRFTQREWEK 945

Query: 666 VWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRK 712
           VW       + KSLDH     K  D +SL AK L   IK   E++R+
Sbjct: 946 VWQNQTEAMHLKSLDHMGIQVKISDKRSLSAKHLVDSIKTKHEEQRR 992



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 47/96 (48%), Positives = 55/96 (57%), Gaps = 4/96 (4%)

Query: 25  PSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTA 84
           P G T      G G    L   D    L  VK  F ++ + Y+ FL++MKDFK+Q IDT 
Sbjct: 211 PHGMTPGSNNMGQGQQPILNVGD----LAVVKVQFSEQPDVYNKFLDIMKDFKSQTIDTP 266

Query: 85  GVIARVKELFKGHRDLILGFNTFLPKGYEITLPLED 120
           GVI RV ELF GH  LI GFNTFLP GY I   LE+
Sbjct: 267 GVINRVSELFAGHPTLIQGFNTFLPPGYRIECGLEN 302



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/59 (49%), Positives = 39/59 (66%)

Query: 141 IKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSG 199
           I+ RFQ    +YK FL+IL  Y++E K I +VY +V  LF   PDLLE+F  FLP+S+ 
Sbjct: 508 IQNRFQDKPEIYKQFLEILQTYQREQKPIQDVYSQVTTLFHSAPDLLEDFKQFLPESAA 566



 Score = 43.5 bits (101), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 27/55 (49%)

Query: 141 IKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLP 195
           +K +F     VY  FLDI+  ++ +      V   V  LF  HP L++ F  FLP
Sbjct: 237 VKVQFSEQPDVYNKFLDIMKDFKSQTIDTPGVINRVSELFAGHPTLIQGFNTFLP 291



 Score = 42.7 bits (99), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 19/56 (33%), Positives = 33/56 (58%)

Query: 55  VKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPK 110
           +++ FQDK E Y  FLE+++ ++ ++     V ++V  LF    DL+  F  FLP+
Sbjct: 508 IQNRFQDKPEIYKQFLEILQTYQREQKPIQDVYSQVTTLFHSAPDLLEDFKQFLPE 563


>gi|323449567|gb|EGB05454.1| hypothetical protein AURANDRAFT_54679 [Aureococcus anophagefferens]
          Length = 481

 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 80/203 (39%), Positives = 116/203 (57%), Gaps = 15/203 (7%)

Query: 492 YLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDY-S 550
           + + P+ E+D S C+R TPSYR LP +   P    R++L   VLND WVS   GSE+  S
Sbjct: 72  WASIPLHEIDFSRCKRGTPSYRGLPTSMSRPRCGGRSDLDLRVLNDVWVSQPVGSEETNS 131

Query: 551 FKHMRKNQYEESLFRCEDDRFELDMLLESVNVT----------TKRVEELLEKINNNTIK 600
           FKH RKN YEE LF+CED+RFELDM+  ++N T            R+E  L         
Sbjct: 132 FKHARKNCYEEELFKCEDERFELDMVKWTLNSTKTPSACTSTGLTRIEAPLSACAQLVGH 191

Query: 601 TDGPIRVEDHFTALNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCR 660
              P+ +    +A +L  I R+YG+HGL+++++L KN    + ++L RLKQK +EW + +
Sbjct: 192 VVKPVAL----SAAHLNAILRVYGEHGLELLELLYKNPRETISIVLKRLKQKGKEWRKLQ 247

Query: 661 SDFNKVWAEIYSKNYHKSLDHRS 683
            D +  W E  S N  ++ D+ S
Sbjct: 248 GDMSDRWKEQLSLNSRRAADNLS 270



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 36/73 (49%), Positives = 51/73 (69%)

Query: 135 INFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFL 194
           I+ V  IK RF  +   YK+FL+IL+ Y+KE +SI +V ++V  LF DHPDLL+EFT+FL
Sbjct: 4   ISKVTTIKKRFAHEPETYKAFLEILHTYQKEQRSIKDVLEQVSQLFADHPDLLKEFTYFL 63

Query: 195 PDSSGAASIHYVP 207
           PD+ G+     +P
Sbjct: 64  PDARGSFLWASIP 76


>gi|346973837|gb|EGY17289.1| paired amphipathic helix protein Sin3b [Verticillium dahliae VdLs.17]
          Length = 1488

 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 119/443 (26%), Positives = 191/443 (43%), Gaps = 96/443 (21%)

Query: 352  ELSFCEKVKDKL--RDDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFL 409
            E++F ++VK  L  +  Y EFL+  +L++++II R              P +    + FL
Sbjct: 640  EIAFFDRVKKYLSNKTSYNEFLKVCNLFSQQIIDR--------------PTVYQKGSVFL 685

Query: 410  ARCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRLD 469
            A    + ELL       S W +                                      
Sbjct: 686  A---ANPELL-------SFWKQ-------------------------------------- 697

Query: 470  KSVAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTE 529
                F+N D     SM    D   A P  ++ LSNC    PSYRLLPK   +   S R E
Sbjct: 698  ----FLNVD-----SMVDVVDNRPAPPTGKVSLSNCRGYGPSYRLLPKRETLKRCSGRDE 748

Query: 530  LGAEVLNDHWVS-VTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVE 588
            L A++LND W S  T  SED  F   RKN +EE L R E++R + D  +E+     + +E
Sbjct: 749  LCADLLNDQWASHPTWASEDSGFVAHRKNGFEEGLHRIEEERHDYDFNIEANIKCIQLLE 808

Query: 589  ELLEKINNNTIKTDG-------PIRVEDHFTALNLRCIERLYG-DHGLDVMDVLRKNASL 640
             + ++IN   + +D        P  +      +  R  +++YG D G +V++ +  N   
Sbjct: 809  PVAQQIN---VMSDAEREGFEMPAALRGGSIPVFKRICKKIYGLDKGPEVVNDMFANPLN 865

Query: 641  ALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALS 700
             +PV+L R+KQK EEW   + ++ KVW       + KSLDH     KQ D ++L A+ L 
Sbjct: 866  VVPVVLARMKQKDEEWRFSQREWEKVWHSQTENMHLKSLDHMGIQVKQTDKRNLSARHLV 925

Query: 701  AEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLI---KYSCGEMC 757
              IK   E++R++  +        R   V    + +SD  I  +L +L+     + G   
Sbjct: 926  DVIKTKHEEQRRQRSL---TGKAPRHQFV----WNFSDKKIIVELLRLMMLYAVNSGHHS 978

Query: 758  TTEQLDKVMKIWTTFLEPMLGVP 780
              E+ +++   + +F+     +P
Sbjct: 979  IPEK-ERITDFFESFIPAFFDIP 1000



 Score = 96.3 bits (238), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 44/69 (63%), Positives = 51/69 (73%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFN 105
           NDAL YL  VK  F D+ + Y+ FL++MKDFK+Q IDT GVI RV ELF GH +LI GFN
Sbjct: 208 NDALTYLDQVKVQFHDQADVYNRFLDIMKDFKSQAIDTPGVINRVSELFAGHPNLIQGFN 267

Query: 106 TFLPKGYEI 114
           TFLP GY I
Sbjct: 268 TFLPPGYRI 276



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 42/91 (46%), Positives = 53/91 (58%), Gaps = 15/91 (16%)

Query: 126 KKPVEFEEAINFVNKIKT---------------RFQGDDHVYKSFLDILNMYRKENKSIT 170
           + PVEF  AI++VNKIK                RFQ    +YK FL+IL  Y++E K I 
Sbjct: 426 RGPVEFNHAISYVNKIKVSSILPNKPLRKFDSNRFQDKPEIYKQFLEILQTYQREQKPIQ 485

Query: 171 EVYQEVEALFQDHPDLLEEFTHFLPDSSGAA 201
           EVY +V  LF   PDLLE+F  FLP+S+G A
Sbjct: 486 EVYAQVTTLFHTAPDLLEDFKQFLPESAGQA 516



 Score = 48.9 bits (115), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 20/65 (30%), Positives = 35/65 (53%)

Query: 131 FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEF 190
             +A+ +++++K +F     VY  FLDI+  ++ +      V   V  LF  HP+L++ F
Sbjct: 207 LNDALTYLDQVKVQFHDQADVYNRFLDIMKDFKSQAIDTPGVINRVSELFAGHPNLIQGF 266

Query: 191 THFLP 195
             FLP
Sbjct: 267 NTFLP 271



 Score = 42.7 bits (99), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 29/108 (26%), Positives = 46/108 (42%), Gaps = 22/108 (20%)

Query: 25  PSGQTQVVGGGGGGGAQ-------KLTTNDALAYLKAVK---------------DIFQDK 62
           P+ Q    G  G    Q        +  N A++Y+  +K               + FQDK
Sbjct: 404 PTPQAGAPGVNGSAAQQAGLERRGPVEFNHAISYVNKIKVSSILPNKPLRKFDSNRFQDK 463

Query: 63  REKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPK 110
            E Y  FLE+++ ++ ++     V A+V  LF    DL+  F  FLP+
Sbjct: 464 PEIYKQFLEILQTYQREQKPIQEVYAQVTTLFHTAPDLLEDFKQFLPE 511


>gi|340500616|gb|EGR27481.1| ubiquitin carboxyl-terminal hydrolase family protein, putative
           [Ichthyophthirius multifiliis]
          Length = 445

 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 84/213 (39%), Positives = 116/213 (54%), Gaps = 13/213 (6%)

Query: 495 KPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHM 554
           KP+ E+D +  +R T SY  +PK Y   + S    L  +VLN   V+V  G+E  SF  M
Sbjct: 207 KPLNEIDFNTHQRYTHSYVYMPK-YYPKNCSNSDYLSKQVLNTKIVTVPMGTEHVSFNIM 265

Query: 555 RKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFTAL 614
           RKN YEE LF+ ED+++E D  +       KR   LLEK+  N IK +   ++     A+
Sbjct: 266 RKNAYEEQLFKSEDEKYEFDFQISMF----KRTIFLLEKVEKNNIKVEDERKIVQQ--AI 319

Query: 615 NLRCIERLYGDHGL----DVMDVLRKNASLALPVILTRLKQKQEEWARCRSD-FNKVWAE 669
           +L+ I  LY  HG+    +V D+L  N     P+IL RLK+K +E    R +   K W E
Sbjct: 320 DLKIISTLYK-HGVKEQQEVCDILLMNPKKTAPLILIRLKEKLQELMNVRQNQAKKQWHE 378

Query: 670 IYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAE 702
           I  KNYH+SLDHRSF FK+ D K +  +    E
Sbjct: 379 IQEKNYHRSLDHRSFIFKRHDRKLIQIQRFEKE 411


>gi|302415907|ref|XP_003005785.1| transcriptional regulatory protein SIN3 [Verticillium albo-atrum
            VaMs.102]
 gi|261355201|gb|EEY17629.1| transcriptional regulatory protein SIN3 [Verticillium albo-atrum
            VaMs.102]
          Length = 1645

 Score =  130 bits (327), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 119/443 (26%), Positives = 191/443 (43%), Gaps = 96/443 (21%)

Query: 352  ELSFCEKVKDKL--RDDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFL 409
            E++F ++VK  L  +  Y EFL+  +L++++II R              P +    + FL
Sbjct: 797  EIAFFDRVKKYLSNKTSYNEFLKVCNLFSQQIIDR--------------PTVYQKGSVFL 842

Query: 410  ARCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRLD 469
            A    + ELL       S W +                                      
Sbjct: 843  A---ANPELL-------SFWKQ-------------------------------------- 854

Query: 470  KSVAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTE 529
                F+N D     SM    D   A P  ++ LSNC    PSYRLLPK   +   S R E
Sbjct: 855  ----FLNVD-----SMVDVVDNRPAPPTGKVSLSNCRGYGPSYRLLPKRETLKRCSGRDE 905

Query: 530  LGAEVLNDHWVS-VTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVE 588
            L A++LND W S  T  SED  F   RKN +EE L R E++R + D  +E+     + +E
Sbjct: 906  LCADLLNDQWASHPTWASEDSGFVAHRKNGFEEGLHRIEEERHDYDFNIEANIKCIQLLE 965

Query: 589  ELLEKINNNTIKTDG-------PIRVEDHFTALNLRCIERLYG-DHGLDVMDVLRKNASL 640
             + ++IN   + +D        P  +      +  R  +++YG D G +V++ +  N   
Sbjct: 966  PVAQQIN---VMSDAERESFEMPAALRGGSIPVFKRICKKIYGLDKGPEVVNDMFANPLN 1022

Query: 641  ALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALS 700
             +PV+L R+KQK EEW   + ++ KVW       + KSLDH     KQ D ++L A+ L 
Sbjct: 1023 VVPVVLARMKQKDEEWRFSQREWEKVWHSQTENMHLKSLDHMGIQVKQTDKRNLSARHLV 1082

Query: 701  AEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLI---KYSCGEMC 757
              IK   E++R++  +        R   V    + +SD  I  +L +L+     + G   
Sbjct: 1083 DVIKTKHEEQRRQRSL---TGKAPRHQFV----WNFSDKKIIVELLRLMMLYAVNSGHHS 1135

Query: 758  TTEQLDKVMKIWTTFLEPMLGVP 780
              E+ +++   + +F+     +P
Sbjct: 1136 IPEK-ERITDFFESFVPAFFDIP 1157



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 43/70 (61%), Positives = 51/70 (72%)

Query: 45  TNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGF 104
           + DAL YL  VK  F D+ + Y+ FL++MKDFK+Q IDT GVI RV ELF GH +LI GF
Sbjct: 383 SQDALTYLDQVKVQFHDQADVYNRFLDIMKDFKSQAIDTPGVINRVSELFAGHPNLIQGF 442

Query: 105 NTFLPKGYEI 114
           NTFLP GY I
Sbjct: 443 NTFLPPGYRI 452



 Score = 82.8 bits (203), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 39/76 (51%), Positives = 51/76 (67%), Gaps = 4/76 (5%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           + PVEF  AI++VNKIK +      +YK FL+IL  Y++E K I EVY +V  LF   PD
Sbjct: 602 RGPVEFNHAISYVNKIKDK----PEIYKQFLEILQTYQREQKPIQEVYAQVTTLFHTAPD 657

Query: 186 LLEEFTHFLPDSSGAA 201
           LLE+F  FLP+S+G A
Sbjct: 658 LLEDFKQFLPESAGQA 673



 Score = 49.7 bits (117), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 20/64 (31%), Positives = 36/64 (56%)

Query: 132 EEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFT 191
           ++A+ +++++K +F     VY  FLDI+  ++ +      V   V  LF  HP+L++ F 
Sbjct: 384 QDALTYLDQVKVQFHDQADVYNRFLDIMKDFKSQAIDTPGVINRVSELFAGHPNLIQGFN 443

Query: 192 HFLP 195
            FLP
Sbjct: 444 TFLP 447



 Score = 42.7 bits (99), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 11/93 (11%)

Query: 25  PSGQTQVVGGGGGGGAQ-------KLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFK 77
           P+ Q    G  G    Q        +  N A++Y+  +KD    K E Y  FLE+++ ++
Sbjct: 580 PTPQAGAPGVNGSAAQQAGLERRGPVEFNHAISYVNKIKD----KPEIYKQFLEILQTYQ 635

Query: 78  AQRIDTAGVIARVKELFKGHRDLILGFNTFLPK 110
            ++     V A+V  LF    DL+  F  FLP+
Sbjct: 636 REQKPIQEVYAQVTTLFHTAPDLLEDFKQFLPE 668


>gi|170112322|ref|XP_001887363.1| histone deacetylase complex, SIN3 component [Laccaria bicolor
           S238N-H82]
 gi|164637689|gb|EDR01972.1| histone deacetylase complex, SIN3 component [Laccaria bicolor
           S238N-H82]
          Length = 1239

 Score =  130 bits (327), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 71/206 (34%), Positives = 124/206 (60%), Gaps = 6/206 (2%)

Query: 511 SYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMRKNQYEESLFRCEDD 569
           SYR + +       S R ++   VLND W+S  T  SED      +KN YEE+L R E++
Sbjct: 536 SYRKVSEKEANVPCSGRDDMCRSVLNDEWISHPTWSSEDPPIIPHKKNIYEEALHRSEEE 595

Query: 570 RFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDH----FTALNLRCIERLYG- 624
           R E D  +E++  T   +E +  KI    ++  G  +++ +    +  ++ R ++++YG 
Sbjct: 596 RHEYDFHIEAIVRTITMLEPISNKIAQMNVEDRGNFKLKPNLGGSWKPIHQRVVKKIYGR 655

Query: 625 DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSF 684
           + GL+VM  ++   +LA+PV+L RLKQK+EEW R + ++NK+W E+ ++NY KSLDH++ 
Sbjct: 656 EAGLEVMQAMQDTPALAIPVVLQRLKQKEEEWKRAQREWNKIWREVDARNYSKSLDHQAI 715

Query: 685 YFKQQDSKSLGAKALSAEIKEISEKK 710
            FK  D K++ +K+  ++I+   E++
Sbjct: 716 DFKAADKKAMMSKSFVSQIEAAREEQ 741



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 42/72 (58%), Positives = 51/72 (70%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
           L   DAL+YL AVK  F D+ + Y+ FL++MK+FK ++IDT GVI RV  LF GH  LI 
Sbjct: 111 LNVTDALSYLDAVKVQFSDQPDVYNHFLDIMKEFKNEQIDTPGVIKRVSHLFNGHPSLIQ 170

Query: 103 GFNTFLPKGYEI 114
           GFNTFLP GY I
Sbjct: 171 GFNTFLPVGYRI 182



 Score = 53.1 bits (126), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 38/69 (55%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDL 186
           +P+   +A+++++ +K +F     VY  FLDI+  ++ E      V + V  LF  HP L
Sbjct: 109 RPLNVTDALSYLDAVKVQFSDQPDVYNHFLDIMKEFKNEQIDTPGVIKRVSHLFNGHPSL 168

Query: 187 LEEFTHFLP 195
           ++ F  FLP
Sbjct: 169 IQGFNTFLP 177



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/70 (41%), Positives = 41/70 (58%), Gaps = 4/70 (5%)

Query: 131 FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI--TEVYQEVEALFQDHPDLLE 188
            E A+ +V KIK R   D   Y+ FLDIL+ Y  ++  I   EV +++  LF+D PDL  
Sbjct: 256 IEPAVQYVQKIKQRCDPD--TYRQFLDILSRYHHKSDIIDEEEVSRQIAKLFKDAPDLRA 313

Query: 189 EFTHFLPDSS 198
           +F  F+PD S
Sbjct: 314 DFRVFMPDRS 323


>gi|58265316|ref|XP_569814.1| Sin3 protein [Cryptococcus neoformans var. neoformans JEC21]
 gi|134109041|ref|XP_776635.1| hypothetical protein CNBC1280 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50259315|gb|EAL21988.1| hypothetical protein CNBC1280 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57226046|gb|AAW42507.1| Sin3 protein, putative [Cryptococcus neoformans var. neoformans
           JEC21]
          Length = 1344

 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 115/414 (27%), Positives = 193/414 (46%), Gaps = 71/414 (17%)

Query: 352 ELSFCEKVKDKLRDD---YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGF 408
           E++F +KVK K  DD   Y EFL+ ++L+ +++I    L       +G  P++   F   
Sbjct: 378 EVAFFDKVK-KFIDDKVVYHEFLKLINLFVQDMIDTKTLLDRAQLFIGDAPEVWATFQRV 436

Query: 409 LARCEKSEELLADVMSKKSLWNEGRIPKS-VKVEDRDRDRDRERDDGVKDRDREAREKDR 467
           +                  + +EGRIP +   ++           D +            
Sbjct: 437 VG-----------------VDSEGRIPPNPASIQGGYGFGGMIGIDNLM-----VENTPM 474

Query: 468 LDKSVAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQR 527
           LD+                        KP  +++L++  +  PSYR LP++ +    + R
Sbjct: 475 LDR-----------------------VKP--DMNLASANQVGPSYRQLPRSEINLQCTGR 509

Query: 528 TELGAEVLNDHWVS-VTSGSEDYS-FKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTK 585
             +  EVLND WV+  T  +ED + F   RKNQ+E++L + E++R E D  +E+      
Sbjct: 510 DAMCWEVLNDEWVAHPTWNAEDVAPFVSHRKNQFEDNLHKSEEERHEYDYHIEA----NL 565

Query: 586 RVEELLEKINNNTIKTDGPIRVEDHFTA--------LNLRCIERLYG-DHGLDVMDVLRK 636
           R   LLE +NN     +   R   +  A        +  R I+++YG + G DV+  L  
Sbjct: 566 RTIALLEPLNNKIQTMEPEERANFNLKAGLGGQSKSIYQRIIKKVYGKELGPDVIRALHD 625

Query: 637 NASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLG- 695
           N  +ALP++L RLK K EEW R + ++N++W E  +KN++K+LD++    K  D K +  
Sbjct: 626 NPIVALPIVLERLKAKDEEWKRAQREWNRLWREQDAKNFYKALDYQHSGTKATDKKKVAP 685

Query: 696 AKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLI 749
           AK L   I EI  +K ++ +   A+         P +EFE++D D+ +D  +LI
Sbjct: 686 AKTL---INEIEARKAEQLNQRSALVDFRVWRAKPQMEFEFTDMDVLKDSMKLI 736



 Score = 86.3 bits (212), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 37/69 (53%), Positives = 49/69 (71%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           +EF  AI FVNKIKTRF  D   YK FL+IL  Y+++ + I EVY++V  LF + PDLL+
Sbjct: 214 LEFNHAITFVNKIKTRFNNDPETYKQFLEILQTYQRDTRDIAEVYEQVTKLFTNAPDLLD 273

Query: 189 EFTHFLPDS 197
           EF  FLP++
Sbjct: 274 EFKQFLPEN 282



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/42 (69%), Positives = 31/42 (73%)

Query: 73  MKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEI 114
           MK+FK Q IDT GVI RV  LF+GH  LI GFNTFLP GY I
Sbjct: 1   MKEFKGQVIDTPGVIDRVSTLFRGHPSLIQGFNTFLPPGYRI 42



 Score = 48.9 bits (115), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 4/92 (4%)

Query: 19  ISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKA 78
           +S   +P+ Q Q     GG  A  L  N A+ ++  +K  F +  E Y  FLE+++ ++ 
Sbjct: 194 LSHGAQPAPQPQ----QGGNRAPILEFNHAITFVNKIKTRFNNDPETYKQFLEILQTYQR 249

Query: 79  QRIDTAGVIARVKELFKGHRDLILGFNTFLPK 110
              D A V  +V +LF    DL+  F  FLP+
Sbjct: 250 DTRDIAEVYEQVTKLFTNAPDLLDEFKQFLPE 281


>gi|392579763|gb|EIW72890.1| hypothetical protein TREMEDRAFT_59052 [Tremella mesenterica DSM
           1558]
          Length = 1241

 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 83/254 (32%), Positives = 139/254 (54%), Gaps = 11/254 (4%)

Query: 503 SNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYS-FKHMRKNQYE 560
           S  +   PSYR LPK   +   S R  +  EVLND WVS  T  +ED + F   +KN YE
Sbjct: 498 SRAKTYGPSYRKLPKTVNL-QCSGRDAMCWEVLNDEWVSHPTWAAEDAAPFMAHKKNAYE 556

Query: 561 ESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TALNL 616
           E+L + E++R E D  +E+   T   +E L  KI+    +      ++        ++  
Sbjct: 557 EALHKSEEERHEYDYHIEANLRTIALLEPLKAKIDAMDAEEKAHFNLKAGLGGQSKSIYQ 616

Query: 617 RCIERLYG-DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNY 675
           R I+++YG + G D++  L +N   ALP++L RL+ K EEW + + ++N+VW E  ++N+
Sbjct: 617 RIIKKVYGKELGPDIIKALHENPVTALPIVLDRLRAKDEEWKKAQREWNRVWREQDARNF 676

Query: 676 HKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEFE 735
           +K+LDH++  FK  D K +  K+L   I EI  ++R++ +   A+   +     P  EF 
Sbjct: 677 YKALDHQAAIFKANDKKLMAPKSL---ITEIETRRREQTNARAALLNPSVDKARPQFEFL 733

Query: 736 YSDPDIHEDLYQLI 749
           + D ++ +D+ +LI
Sbjct: 734 FDDVEVIKDIVKLI 747



 Score = 89.7 bits (221), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 42/72 (58%), Positives = 49/72 (68%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
           L   DAL YL  VK+ F D  + Y+ FL++MK+FK Q IDT GVI RV  LF+GH  LI 
Sbjct: 20  LNVRDALTYLDQVKNQFADHPDVYNRFLDIMKEFKGQIIDTPGVIDRVSTLFRGHPALIQ 79

Query: 103 GFNTFLPKGYEI 114
           GFNTFLP GY I
Sbjct: 80  GFNTFLPPGYRI 91



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 35/68 (51%), Positives = 48/68 (70%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           +EF  AI+FVNKIK RF  +   YK FL+IL  Y+++ + I EVY++V+ LF + PDLL 
Sbjct: 250 LEFNHAISFVNKIKNRFNQEHDTYKQFLEILQTYQRDTRDIVEVYEQVQKLFINAPDLLT 309

Query: 189 EFTHFLPD 196
           EF  FLP+
Sbjct: 310 EFKQFLPE 317



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 71/313 (22%), Positives = 118/313 (37%), Gaps = 31/313 (9%)

Query: 123 PPPK------KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEV 176
           PPP       +P+   +A+ +++++K +F     VY  FLDI+  ++ +      V   V
Sbjct: 8   PPPAADRIDYRPLNVRDALTYLDQVKNQFADHPDVYNRFLDIMKEFKGQIIDTPGVIDRV 67

Query: 177 EALFQDHPDLLEEFTHFLP-----------DSSGAASIHYVPSGRNSILRDRSSAMPTAR 225
             LF+ HP L++ F  FLP           D SG  ++   PSG  S +    SA    R
Sbjct: 68  STLFRGHPALIQGFNTFLPPGYRIEASTADDDSGKITVT-TPSGTVSQMPGALSAAIHQR 126

Query: 226 Q---VHVDKKERAMASHADRDLS--VDRPDPDHDRVLLKSDKDQRRRGEKERERRDD-HR 279
               + V++   +M   A    S  VD   P H  +       Q     +          
Sbjct: 127 YREGIAVNRTSPSMHETAPPGPSQIVDPLPPLHSHLSSGPPPFQNTHNARGAPVVPGLPP 186

Query: 280 RERERDDRDFENDVNRDFSMQRFPHKRKSARKIEDSTAEPLHQGGEGDENFGMHPVSSSY 339
            +     R   N  +    +   PH +  +     ST   +     G       P +++ 
Sbjct: 187 AQPSVTTRPLNNVQSAPGPLPLPPHTQPPSAPSGPSTPSAVQFLASGASG----PGAAAQ 242

Query: 340 DDKNAMKSMFSQELSFCEKVKDKL---RDDYQEFLRCLHLYTKEIITRSELQSLVGDLLG 396
             +      F+  +SF  K+K++     D Y++FL  L  Y ++     E+   V  L  
Sbjct: 243 AGQRGQMLEFNHAISFVNKIKNRFNQEHDTYKQFLEILQTYQRDTRDIVEVYEQVQKLFI 302

Query: 397 RYPDLMDGFNGFL 409
             PDL+  F  FL
Sbjct: 303 NAPDLLTEFKQFL 315



 Score = 49.3 bits (116), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 8/99 (8%)

Query: 20  SSRGEPSGQTQVVGGGGGGGA--------QKLTTNDALAYLKAVKDIFQDKREKYDDFLE 71
           S    PS    +  G  G GA        Q L  N A++++  +K+ F  + + Y  FLE
Sbjct: 219 SGPSTPSAVQFLASGASGPGAAAQAGQRGQMLEFNHAISFVNKIKNRFNQEHDTYKQFLE 278

Query: 72  VMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPK 110
           +++ ++    D   V  +V++LF    DL+  F  FLP+
Sbjct: 279 ILQTYQRDTRDIVEVYEQVQKLFINAPDLLTEFKQFLPE 317


>gi|15238557|ref|NP_198411.1| paired amphipathic helix repeat-containing protein [Arabidopsis
           thaliana]
 gi|9758686|dbj|BAB09302.1| unnamed protein product [Arabidopsis thaliana]
 gi|332006607|gb|AED93990.1| paired amphipathic helix repeat-containing protein [Arabidopsis
           thaliana]
          Length = 155

 Score =  130 bits (326), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 75/149 (50%), Positives = 100/149 (67%), Gaps = 15/149 (10%)

Query: 39  GAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHR 98
            A K+T ++   YLK VK+  Q+KRE Y  FL+VM  + AQRID +GV + VKELFK  +
Sbjct: 2   SASKITKSNPRKYLKIVKNKLQNKREIYVRFLQVMTAYSAQRIDPSGVKSVVKELFKEDQ 61

Query: 99  DLILGFNTFLPKGYEI---------TLPLEDEQPPPKKPV--EFEEAINFVNKIKTRFQG 147
           + I GFNTFLPKG+EI          + LE EQ PPKK V  E+ EA++FV K+K     
Sbjct: 62  EPISGFNTFLPKGFEIKPECDQNGFKIKLECEQTPPKKYVDIEYSEALDFVRKVK----D 117

Query: 148 DDHVYKSFLDILNMYRKENKSITEVYQEV 176
           DD +YKSF+ I++MY+K+NKS+ EV +EV
Sbjct: 118 DDRIYKSFVTIMDMYKKKNKSLDEVCREV 146


>gi|378728450|gb|EHY54909.1| hypothetical protein HMPREF1120_03068 [Exophiala dermatitidis
            NIH/UT8656]
          Length = 1535

 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 101/314 (32%), Positives = 155/314 (49%), Gaps = 28/314 (8%)

Query: 500  LDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMRKNQ 558
            ++LS+C    PSYR LPK         R  +  EVLND W S  T  SED  F   RKNQ
Sbjct: 791  VNLSHCRALGPSYRHLPKREQNKPCKGRDGMCYEVLNDVWASHPTWASEDSGFVAHRKNQ 850

Query: 559  YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFT----AL 614
            YEE+L R E++R + D  +E    T + +E ++++I   +        +         A+
Sbjct: 851  YEEALHRIEEERHDYDFHIECCQRTIQLMEPIVQQIGVMSEADRAAFVLAPGLGGSSEAI 910

Query: 615  NLRCIERLYG-DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSK 673
              R I ++YG + G  VM  +    +  LP++L+RLKQK EEW   + ++ KVW +   K
Sbjct: 911  PKRIIMKVYGREVGGRVMQEMFARPTAVLPIVLSRLKQKLEEWKHVQREWEKVWRDQIHK 970

Query: 674  NYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVP--- 730
            ++ KSLDH+    K  D K+   K L++EI+   E+ +K           NR S +P   
Sbjct: 971  HFWKSLDHQGINAKNLDKKNFQQKTLTSEIQAKYEEAKK-----------NRESGIPAKR 1019

Query: 731  -HLEFEYSDPDIHEDLYQLIKYSCG----EMCTTEQLDKVMKIWTTFLEPMLGV-PSRPQ 784
              LE+++ D D+  D  +LI  S      +  T+EQ DK+      F+    G+ P + Q
Sbjct: 1020 HQLEYKFDDLDVIADAARLILVSLESERVQYNTSEQ-DKLRGWLVDFVVHFFGLDPEKFQ 1078

Query: 785  GAEDTEDVVKAKSH 798
               DT D ++ + H
Sbjct: 1079 EQIDT-DSLRNREH 1091



 Score = 93.2 bits (230), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 44/75 (58%), Positives = 51/75 (68%)

Query: 40  AQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRD 99
            Q+   NDAL+YL  VK  F D  + Y+ FL++MKDFK+Q IDT GVI RV  LF GH  
Sbjct: 277 GQQPILNDALSYLDQVKVRFSDHPDVYNRFLDIMKDFKSQAIDTPGVIERVSNLFNGHPA 336

Query: 100 LILGFNTFLPKGYEI 114
           LI GFNTFLP GY I
Sbjct: 337 LIQGFNTFLPPGYRI 351



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 38/72 (52%), Positives = 50/72 (69%)

Query: 128 PVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLL 187
           PVEF  AI++VNKIK RF     +YK FL+IL  Y++E+K I +VY +V  LF   PDLL
Sbjct: 502 PVEFNHAISYVNKIKNRFAQQPEIYKQFLEILQTYQRESKPIQDVYAQVTQLFVSAPDLL 561

Query: 188 EEFTHFLPDSSG 199
           E+F  FLP+S+ 
Sbjct: 562 EDFKQFLPESAA 573



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 48/90 (53%), Gaps = 3/90 (3%)

Query: 106 TFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKE 165
           TF+P    +T P +      ++P+   +A+++++++K RF     VY  FLDI+  ++ +
Sbjct: 260 TFMPGPSPMTAPAQLAHG--QQPI-LNDALSYLDQVKVRFSDHPDVYNRFLDIMKDFKSQ 316

Query: 166 NKSITEVYQEVEALFQDHPDLLEEFTHFLP 195
                 V + V  LF  HP L++ F  FLP
Sbjct: 317 AIDTPGVIERVSNLFNGHPALIQGFNTFLP 346



 Score = 53.1 bits (126), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 2/76 (2%)

Query: 347 SMFSQELSFCEKVKDKL--RDDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDG 404
           S   +EL F ++ K ++  R  Y EFL+ ++LYT+++I +  L   VG  +G  P+LM+ 
Sbjct: 707 STTQEELGFFDRAKKQIGNRASYAEFLKLINLYTQDLIDKYTLADRVGSFIGNSPELMNW 766

Query: 405 FNGFLARCEKSEELLA 420
           F  FL   E+ E + A
Sbjct: 767 FKNFLGIEEQDEIIEA 782



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 30/107 (28%), Positives = 51/107 (47%), Gaps = 10/107 (9%)

Query: 14  IKRPMIS---SRGEPSGQTQVVGGGGGGGA-------QKLTTNDALAYLKAVKDIFQDKR 63
           + RP ++     G+P    Q  G  GG  A         +  N A++Y+  +K+ F  + 
Sbjct: 464 MSRPALAVSPGPGQPGQYPQQAGAFGGNAALGELKRGGPVEFNHAISYVNKIKNRFAQQP 523

Query: 64  EKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPK 110
           E Y  FLE+++ ++ +      V A+V +LF    DL+  F  FLP+
Sbjct: 524 EIYKQFLEILQTYQRESKPIQDVYAQVTQLFVSAPDLLEDFKQFLPE 570


>gi|405118938|gb|AFR93711.1| Sin3 protein [Cryptococcus neoformans var. grubii H99]
          Length = 1383

 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 115/414 (27%), Positives = 193/414 (46%), Gaps = 71/414 (17%)

Query: 352 ELSFCEKVKDKLRDD---YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGF 408
           E++F +KVK K  DD   Y EFL+ ++L+ +++I    L       +G  P++   F   
Sbjct: 428 EVAFFDKVK-KFIDDKVVYHEFLKLINLFVQDMIDTKTLLDRAQLFIGDAPEVWATFQRV 486

Query: 409 LARCEKSEELLADVMSKKSLWNEGRIPKS-VKVEDRDRDRDRERDDGVKDRDREAREKDR 467
           +                  + +EGRIP +   ++           D +            
Sbjct: 487 VG-----------------VDSEGRIPPNPASIQGGYGFGGMIGIDNLM-----VENTPM 524

Query: 468 LDKSVAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQR 527
           LD+                        KP  +++L++  +  PSYR LP++ +    + R
Sbjct: 525 LDR-----------------------VKP--DMNLASANQVGPSYRQLPRSEINLQCTGR 559

Query: 528 TELGAEVLNDHWVS-VTSGSEDYS-FKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTK 585
             +  EVLND WV+  T  +ED + F   RKNQ+E++L + E++R E D  +E+      
Sbjct: 560 DAMCWEVLNDEWVAHPTWNAEDVAPFVSHRKNQFEDNLHKSEEERHEYDYHIEA----NL 615

Query: 586 RVEELLEKINNNTIKTDGPIRVEDHFTA--------LNLRCIERLYG-DHGLDVMDVLRK 636
           R   LLE +NN     +   R   +  A        +  R I+++YG + G DV+  L  
Sbjct: 616 RTIALLEPLNNKIQTMEPEERANFNLKAGLGGQSKSIYQRIIKKVYGKELGPDVIRALHD 675

Query: 637 NASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLG- 695
           N  +ALP++L RLK K EEW R + ++N++W E  +KN++K+LD++    K  D K +  
Sbjct: 676 NPVVALPIVLERLKAKDEEWKRAQREWNRLWREQDAKNFYKALDYQHSGTKATDKKKVAP 735

Query: 696 AKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLI 749
           AK L   I EI  +K ++ +   A+         P +EFE++D D+ +D  +LI
Sbjct: 736 AKTL---INEIEARKAEQLNQRSALVDFRVWRAKPQMEFEFTDMDVLKDSMKLI 786



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 37/69 (53%), Positives = 49/69 (71%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           +EF  AI FVNKIKTRF  D   YK FL+IL  Y+++ + I EVY++V  LF + PDLL+
Sbjct: 265 LEFNHAITFVNKIKTRFNNDPETYKQFLEILQTYQRDTRDIAEVYEQVTKLFTNAPDLLD 324

Query: 189 EFTHFLPDS 197
           EF  FLP++
Sbjct: 325 EFKQFLPEN 333



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 35/56 (62%), Positives = 41/56 (73%)

Query: 59  FQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEI 114
           F D+ + Y+ FL+VMK+FK Q IDT GVI RV  LF+GH  LI GFNTFLP GY I
Sbjct: 38  FNDQPDVYNRFLDVMKEFKGQVIDTPGVIDRVSTLFRGHPSLIQGFNTFLPPGYRI 93



 Score = 49.3 bits (116), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 4/92 (4%)

Query: 19  ISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKA 78
           +S   +P+ Q Q     GG  A  L  N A+ ++  +K  F +  E Y  FLE+++ ++ 
Sbjct: 245 LSHGAQPAPQPQ----QGGNRAPILEFNHAITFVNKIKTRFNNDPETYKQFLEILQTYQR 300

Query: 79  QRIDTAGVIARVKELFKGHRDLILGFNTFLPK 110
              D A V  +V +LF    DL+  F  FLP+
Sbjct: 301 DTRDIAEVYEQVTKLFTNAPDLLDEFKQFLPE 332


>gi|413948655|gb|AFW81304.1| hypothetical protein ZEAMMB73_586422, partial [Zea mays]
          Length = 525

 Score =  129 bits (325), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 75/214 (35%), Positives = 124/214 (57%), Gaps = 11/214 (5%)

Query: 571 FELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFTALNLRCIERLYGDHGLDV 630
           FE DMLL+    T+  +  L  + +      D  + ++DH T L+ RCIE+LY +HGLD+
Sbjct: 2   FESDMLLQRYRATSDFIRNLQLQED-----VDKDMTIQDHLTPLHRRCIEQLYDEHGLDM 56

Query: 631 MDVL--RKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQ 688
           +D L  + +  +AL ++ +RL QK E+  + +   NK  + I + NY++SLDHRS  FKQ
Sbjct: 57  LDALSQKTDTRIALVILESRLNQKIEDLEQAQLSLNKACSNIIANNYYRSLDHRSSSFKQ 116

Query: 689 QDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQL 748
            D + +  KAL AE +EI+  + K  D  ++    N+ S++    F  ++  IHED+ ++
Sbjct: 117 LDKRRMRPKALLAEAREINMARLKNGDKHIS-DCNNQSSLISENVFTDTNLHIHEDIDRM 175

Query: 749 IKYSCGEMCTTEQLDKVMKIWTTFLEPMLGVPSR 782
           ++Y+C + C +EQ   +M IWTT  +P   +  R
Sbjct: 176 VRYAC-KGCPSEQ--NLMMIWTTLAQPCFSIIGR 206


>gi|312374410|gb|EFR21971.1| hypothetical protein AND_15965 [Anopheles darlingi]
          Length = 2110

 Score =  129 bits (324), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 65/162 (40%), Positives = 101/162 (62%), Gaps = 4/162 (2%)

Query: 499  ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQ 558
            ++DLS C+R   SY  LPK++     S RT L  +VLND WV   + SED +F   RK Q
Sbjct: 1539 DIDLSTCKRLGASYCALPKSHENVKCSGRTSLCRDVLNDTWVYFPTWSEDSTFVTSRKTQ 1598

Query: 559  YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFTA----L 614
            YEE ++RCED+RFELD+++E+ + T + +E + +K+   +       R++D        +
Sbjct: 1599 YEEFIYRCEDERFELDVVIETNSATIRVLEGVQKKLTRMSQDEISRFRLDDCLGGTSPTI 1658

Query: 615  NLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEW 656
            + R + R+YGD   D++  L+KN S+A+PV+L R+K K+EEW
Sbjct: 1659 HQRALRRIYGDKAADIIQGLKKNPSVAVPVVLRRMKAKEEEW 1700



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 49/97 (50%), Positives = 65/97 (67%), Gaps = 9/97 (9%)

Query: 25  PSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTA 84
           P GQ Q+         Q+L   DAL+YL  VK  F ++ + Y+DFL++MK+FK+Q IDT 
Sbjct: 716 PQGQAQL---------QRLKVEDALSYLDQVKYRFGNQPQVYNDFLDIMKEFKSQSIDTP 766

Query: 85  GVIARVKELFKGHRDLILGFNTFLPKGYEITLPLEDE 121
           GVI RV  LFKGH +LI+GFNTFLP GY+I +   D+
Sbjct: 767 GVIQRVSNLFKGHPELIVGFNTFLPPGYKIEVQANDQ 803



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 40/90 (44%), Positives = 51/90 (56%), Gaps = 17/90 (18%)

Query: 127  KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKS---------------IT- 170
            +PVEF  AI +VNKIK RF      YK FL+IL+ Y+KE K+               +T 
Sbjct: 1083 QPVEFNHAITYVNKIKNRFLLQPEKYKRFLEILHTYQKEQKTHKETAQSGNSVNAKQLTE 1142

Query: 171  -EVYQEVEALFQDHPDLLEEFTHFLPDSSG 199
             EVY +V  LF +  DLL EF  FLPD++G
Sbjct: 1143 AEVYTQVAKLFDNQEDLLREFGQFLPDATG 1172



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 29/59 (49%), Positives = 41/59 (69%), Gaps = 2/59 (3%)

Query: 354  SFCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLA 410
            +F +KV+  LR  D Y+ FLRCL L+ +EI+++SELQ+L+   L RYPDL+  F  FL 
Sbjct: 1448 AFFDKVRKALRSPDVYENFLRCLTLFNQEIVSKSELQTLIAPFLSRYPDLLKWFQDFLG 1506



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 8/80 (10%)

Query: 124 PPKKP--------VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQE 175
           PP  P        ++ E+A+++++++K RF     VY  FLDI+  ++ ++     V Q 
Sbjct: 712 PPSAPQGQAQLQRLKVEDALSYLDQVKYRFGNQPQVYNDFLDIMKEFKSQSIDTPGVIQR 771

Query: 176 VEALFQDHPDLLEEFTHFLP 195
           V  LF+ HP+L+  F  FLP
Sbjct: 772 VSNLFKGHPELIVGFNTFLP 791



 Score = 42.7 bits (99), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 1/71 (1%)

Query: 137  FVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLPD 196
            F +K++   +  D VY++FL  L ++ +E  S +E+   +      +PDLL+ F  FL  
Sbjct: 1449 FFDKVRKALRSPD-VYENFLRCLTLFNQEIVSKSELQTLIAPFLSRYPDLLKWFQDFLGP 1507

Query: 197  SSGAASIHYVP 207
              G AS   VP
Sbjct: 1508 PGGTASSECVP 1518



 Score = 41.6 bits (96), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 19/101 (18%)

Query: 31   VVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFK------------- 77
            V     G   Q +  N A+ Y+  +K+ F  + EKY  FLE++  ++             
Sbjct: 1073 VAPASAGTANQPVEFNHAITYVNKIKNRFLLQPEKYKRFLEILHTYQKEQKTHKETAQSG 1132

Query: 78   ----AQRIDTAGVIARVKELFKGHRDLILGFNTFLP--KGY 112
                A+++  A V  +V +LF    DL+  F  FLP   GY
Sbjct: 1133 NSVNAKQLTEAEVYTQVAKLFDNQEDLLREFGQFLPDATGY 1173


>gi|409051910|gb|EKM61386.1| hypothetical protein PHACADRAFT_134990 [Phanerochaete carnosa
           HHB-10118-sp]
          Length = 1242

 Score =  129 bits (324), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 81/262 (30%), Positives = 143/262 (54%), Gaps = 22/262 (8%)

Query: 510 PSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMRKNQYEESLFRCED 568
           PSYR LP +    + S R +L   VLND WVS  T  SE+  F   +KN +EE+L R E+
Sbjct: 522 PSYRRLPPHETKLACSGRDQLAWAVLNDEWVSHPTWASEESGFLTHKKNSFEETLHRSEE 581

Query: 569 DRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TALNLRCIERLYG 624
           +R E    ++S+      ++ +  +IN    +     R+         A+  + ++++YG
Sbjct: 582 ERHEYQTHIDSITRIIAVLDPINTRINEMKPEERSQFRLGSDLGGWSPAIYQKTLKKVYG 641

Query: 625 -DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRS 683
            DH  ++   L++N   A+P++L+RLKQK EEW R + ++N+ W E+ +KN++K+LDH+ 
Sbjct: 642 RDHWPEIYVGLQENPVTAVPIVLSRLKQKNEEWRRQQREWNRTWREVDAKNFYKALDHQG 701

Query: 684 FYFKQQDSKSLGAKALSAEIK-----EISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSD 738
             FK  D K++ AK    +I+     ++ E++ ++D  LL             LE+E+ D
Sbjct: 702 ITFKANDKKNITAKYFVQDIEFMKAAQVKEREERKDFRLLGY----------QLEYEFQD 751

Query: 739 PDIHEDLYQLIKYSCGEMCTTE 760
            ++ +D  ++I YS  +  T++
Sbjct: 752 REVLQDTLKMI-YSFLDHSTSQ 772



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 52/93 (55%), Positives = 62/93 (66%), Gaps = 5/93 (5%)

Query: 29  TQVVGGG-----GGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDT 83
           TQ+VG         G A+ L  +DAL YL AVK  FQDK + Y+ FL++MKDFK+Q IDT
Sbjct: 5   TQLVGPAVPRSPDAGMARPLNVSDALGYLDAVKVQFQDKPDVYNHFLDIMKDFKSQAIDT 64

Query: 84  AGVIARVKELFKGHRDLILGFNTFLPKGYEITL 116
            GVI RV  LF+G+  LI GFNTFLP GY I L
Sbjct: 65  PGVIHRVSTLFQGNPTLIQGFNTFLPPGYRIEL 97



 Score = 84.7 bits (208), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 79/282 (28%), Positives = 123/282 (43%), Gaps = 42/282 (14%)

Query: 130 EFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI--TEVYQEVEALFQDHPDLL 187
           EF  AI F+NKIK R+  +  +YK FL+IL  Y+KE K +  ++VY +V  LF+D PDL+
Sbjct: 220 EFNHAIQFLNKIKIRYSDEPDIYKQFLEILQTYQKEQKQLHDSQVYAQVARLFRDAPDLM 279

Query: 188 EEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQVHVDKKERAMASHADRDLSVD 247
           EEF  FLP++ G                   S  P +  V +     A  S    DL  D
Sbjct: 280 EEFKDFLPEALG------------------HSIQPQSGLVGIMPHPAAPTSPPTWDLP-D 320

Query: 248 RPDPDHDRVLLKSDKDQRRRGEKE-RERRDDHRRERERDDRDFENDVNRDFSMQRFPHKR 306
            P    ++     ++ ++R  +K+  + +    R  +R      N+   D +  R P  +
Sbjct: 321 APLTGMEKATKAPNRRRKRAVDKDTTQSKAGGSRAVKRTKL---NNKQADAASPRIPPFQ 377

Query: 307 KSARKIEDSTAEPLH-------QGGEGDENFGMHPV--SSSYDDKNAMKSMFSQ-ELSFC 356
           +        T EPLH       +  +  ++        S +    N +  M  Q EL F 
Sbjct: 378 QRL-----PTPEPLHPSQRHTNEAPQVQQHLAPPAAVPSQAGSGMNGVSQMSQQDELLFF 432

Query: 357 EKVKDKLRD--DYQEFLRCLHLYTKEIITRSELQSLVGDLLG 396
           +K K  L     Y++FL+ +  + KE+I    L  L G LL 
Sbjct: 433 DKTKKTLESAGTYEDFLKLIQAFAKEVIDTHALIQLSGPLLA 474



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 38/69 (55%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDL 186
           +P+   +A+ +++ +K +FQ    VY  FLDI+  ++ +      V   V  LFQ +P L
Sbjct: 22  RPLNVSDALGYLDAVKVQFQDKPDVYNHFLDIMKDFKSQAIDTPGVIHRVSTLFQGNPTL 81

Query: 187 LEEFTHFLP 195
           ++ F  FLP
Sbjct: 82  IQGFNTFLP 90



 Score = 42.4 bits (98), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 26/96 (27%), Positives = 50/96 (52%), Gaps = 6/96 (6%)

Query: 22  RGEPSGQTQVVGGGGGGGAQKLTT----NDALAYLKAVKDIFQDKREKYDDFLEVMKDFK 77
           +G  S     +GG G G   + ++    N A+ +L  +K  + D+ + Y  FLE+++ ++
Sbjct: 194 QGAHSAAASFLGGLGNGRTVEKSSVGEFNHAIQFLNKIKIRYSDEPDIYKQFLEILQTYQ 253

Query: 78  AQR--IDTAGVIARVKELFKGHRDLILGFNTFLPKG 111
            ++  +  + V A+V  LF+   DL+  F  FLP+ 
Sbjct: 254 KEQKQLHDSQVYAQVARLFRDAPDLMEEFKDFLPEA 289


>gi|407929243|gb|EKG22077.1| Paired amphipathic helix [Macrophomina phaseolina MS6]
          Length = 1482

 Score =  129 bits (324), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 90/263 (34%), Positives = 134/263 (50%), Gaps = 18/263 (6%)

Query: 496 PIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHM 554
           P   + LSNC    PSYR LP+   +   S R EL   VLND W S  T  SED  F   
Sbjct: 703 PSGRVALSNCRGLGPSYRQLPRAEKMRRCSGRDELCHSVLNDEWASHPTWASEDSGFVAH 762

Query: 555 RKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNT----IKTDGPIRVEDH 610
           RKNQYEE L R E++R + D  +E+   T +++E + +++ N T    ++   P  +   
Sbjct: 763 RKNQYEEGLHRIEEERHDYDHTIEACIRTIQQLEPIAQQLLNATAEERLQFQLPSNLGGQ 822

Query: 611 FTALNLRCIERLYG-DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAE 669
              +  R I ++Y  + G  V+  L       +PV+L R+KQK EEW   + ++ KVW E
Sbjct: 823 SETIYKRVIYKIYNRERGNQVIQQLFDTPYQVIPVLLNRMKQKLEEWKAAQREWEKVWRE 882

Query: 670 IYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIK-EISEKKRKEDDVLLAIAAGNRRSI 728
              + + KSLDH+S   K  D +   AK L  EI+ +  E+KR+ +   L+         
Sbjct: 883 QTQRIFWKSLDHQSASAKAADKRQFQAKTLQNEIQVKYEEQKRQREMQGLS--------- 933

Query: 729 VPHLEFEY--SDPDIHEDLYQLI 749
           VP  +FEY  +D D+  D  +L+
Sbjct: 934 VPKYQFEYKFTDVDVLLDASRLL 956



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 48/92 (52%), Positives = 59/92 (64%), Gaps = 3/92 (3%)

Query: 23  GEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRID 82
           G P G  Q +  G G   Q+   NDAL+YL  VK  F +  + Y+ FL++MKDFK+  ID
Sbjct: 139 GGPQGMQQSLAMGQG---QQPILNDALSYLDQVKVQFHEHPDVYNKFLDIMKDFKSGAID 195

Query: 83  TAGVIARVKELFKGHRDLILGFNTFLPKGYEI 114
           T GVI RV  LF GH +LI GFNTFLP GY+I
Sbjct: 196 TPGVIDRVSSLFAGHPNLIQGFNTFLPPGYKI 227



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 38/72 (52%), Positives = 50/72 (69%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           + PVEF  AI++VNKIK RF     +YK FL+IL  Y++E+K I +VY +V  LF   PD
Sbjct: 411 RGPVEFNHAISYVNKIKNRFATQPDIYKQFLEILQTYQRESKPIQDVYAQVTQLFNSAPD 470

Query: 186 LLEEFTHFLPDS 197
           LLE+F  FLP+S
Sbjct: 471 LLEDFKQFLPES 482



 Score = 50.4 bits (119), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 25/87 (28%), Positives = 45/87 (51%), Gaps = 5/87 (5%)

Query: 109 PKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKS 168
           P+G + +L +   Q P        +A+++++++K +F     VY  FLDI+  ++     
Sbjct: 141 PQGMQQSLAMGQGQQP-----ILNDALSYLDQVKVQFHEHPDVYNKFLDIMKDFKSGAID 195

Query: 169 ITEVYQEVEALFQDHPDLLEEFTHFLP 195
              V   V +LF  HP+L++ F  FLP
Sbjct: 196 TPGVIDRVSSLFAGHPNLIQGFNTFLP 222



 Score = 47.0 bits (110), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 55/111 (49%), Gaps = 14/111 (12%)

Query: 14  IKRP-MISSRGEPSGQ--TQVVGGGG----GGGAQKLT-------TNDALAYLKAVKDIF 59
           + RP +IS  G  +GQ   Q + G G      GAQ +         N A++Y+  +K+ F
Sbjct: 371 LNRPDLISPPGGAAGQMPAQSLNGVGHLAQQAGAQAVLDKRGPVEFNHAISYVNKIKNRF 430

Query: 60  QDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPK 110
             + + Y  FLE+++ ++ +      V A+V +LF    DL+  F  FLP+
Sbjct: 431 ATQPDIYKQFLEILQTYQRESKPIQDVYAQVTQLFNSAPDLLEDFKQFLPE 481


>gi|321254552|ref|XP_003193114.1| sin3 protein [Cryptococcus gattii WM276]
 gi|317459583|gb|ADV21327.1| Sin3 protein, putative [Cryptococcus gattii WM276]
          Length = 1322

 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 114/414 (27%), Positives = 194/414 (46%), Gaps = 71/414 (17%)

Query: 352 ELSFCEKVKDKLRDD---YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGF 408
           E++F +KVK K  DD   Y EFL+ ++L+ +++I    L       +G  P++   F   
Sbjct: 396 EVAFFDKVK-KFIDDKVVYHEFLKLINLFVQDMIDTKTLLDRAQLFIGDSPEVWATF--- 451

Query: 409 LARCEKSEELLADVMSKKSLWNEGRIPKS-VKVEDRDRDRDRERDDGVKDRDREAREKDR 467
                   + + DV S      EGRIP +   ++           D +   +    ++ +
Sbjct: 452 --------QKVVDVDS------EGRIPPNPASIQGGYGFGGMIGIDNLMVENTPMLDRIK 497

Query: 468 LDKSVAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQR 527
            D                              ++L++  +  PSYR LP++ +    + R
Sbjct: 498 PD------------------------------MNLASANQVGPSYRQLPRSEINLQCTGR 527

Query: 528 TELGAEVLNDHWVS-VTSGSEDYS-FKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTK 585
             +  EVLND WV+  T  +ED + F   RKNQ+E++L + E++R E D  +E+      
Sbjct: 528 DAMCWEVLNDEWVAHPTWNAEDVAPFVSHRKNQFEDNLHKSEEERHEYDYHIEA----NL 583

Query: 586 RVEELLEKINNNTIKTDGPIRVEDHFTA--------LNLRCIERLYG-DHGLDVMDVLRK 636
           R   LLE +NN     +   R   +  A        +  R I+++YG + G DV+  L  
Sbjct: 584 RTIALLEPLNNKIQTMEPEERANFNLKAGLGGQSKSIYQRIIKKVYGKELGPDVIRALHD 643

Query: 637 NASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLG- 695
           N  +ALP++L RLK K EEW R + ++N++W E  +KN++K+LD++    K  D K +  
Sbjct: 644 NPVVALPIVLERLKAKDEEWKRAQREWNRLWREQDAKNFYKALDYQHSGTKATDKKKVAP 703

Query: 696 AKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLI 749
           AK L   I EI  +K ++ +   A+         P +EFE++D ++ +D  +LI
Sbjct: 704 AKTL---INEIEARKAEQLNQRSALVDFRVWRAKPQMEFEFTDMEVLKDSIKLI 754



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 37/69 (53%), Positives = 49/69 (71%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           +EF  AI FVNKIKTRF  D   YK FL+IL  Y+++ + I EVY++V  LF + PDLL+
Sbjct: 216 LEFNHAITFVNKIKTRFNNDPETYKQFLEILQTYQRDTRDIAEVYEQVTKLFTNAPDLLD 275

Query: 189 EFTHFLPDS 197
           EF  FLP++
Sbjct: 276 EFKQFLPEN 284



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/42 (69%), Positives = 31/42 (73%)

Query: 73  MKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEI 114
           MK+FK Q IDT GVI RV  LF+GH  LI GFNTFLP GY I
Sbjct: 1   MKEFKGQVIDTPGVIDRVSTLFRGHPSLIQGFNTFLPPGYRI 42



 Score = 44.3 bits (103), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 37/71 (52%)

Query: 40  AQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRD 99
           A  L  N A+ ++  +K  F +  E Y  FLE+++ ++    D A V  +V +LF    D
Sbjct: 213 APILEFNHAITFVNKIKTRFNNDPETYKQFLEILQTYQRDTRDIAEVYEQVTKLFTNAPD 272

Query: 100 LILGFNTFLPK 110
           L+  F  FLP+
Sbjct: 273 LLDEFKQFLPE 283


>gi|452842377|gb|EME44313.1| hypothetical protein DOTSEDRAFT_71974 [Dothistroma septosporum NZE10]
          Length = 1564

 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 93/300 (31%), Positives = 145/300 (48%), Gaps = 21/300 (7%)

Query: 472  VAFVNKDVGPKMSMYSSKDKYLAK----PIQELDLSNCERCTPSYRLLPKNYLIPSASQR 527
            VA++ + VG     Y  KD  +      P   + LSNC    PSYRLLPK       S R
Sbjct: 735  VAWLKQWVG-----YDEKDVLIENKPRLPSGRVMLSNCRGLGPSYRLLPKRERQKPCSGR 789

Query: 528  TELGAEVLNDHWVS-VTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKR 586
             EL   VLND W S  T  SED  F   RKN +EE+L R E++R + D  +E+ + T + 
Sbjct: 790  DELCNSVLNDEWASHPTWASEDSGFIAHRKNVHEEALHRIEEERHDYDFNIEACSRTIQL 849

Query: 587  VEELLEKI----NNNTIKTDGPIRVEDHFTALNLRCIERLYG-DHGLDVMDVLRKNASLA 641
            +E +   +    +   ++   P  +      +  R I +LY  D G DV+  L +   + 
Sbjct: 850  LEPIATSLRRMPDREQVQYTLPPGLGGQSETIYRRVIMKLYNRDKGEDVIKQLHERPYMV 909

Query: 642  LPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSA 701
            +PV+L RLK++ E W   + ++ KVW E   K + +SLDH++   K  D +    K L +
Sbjct: 910  IPVLLNRLKERLETWKMAQREWEKVWREQTQKMFWRSLDHQAAQTKHIDRRQFQNKTLQS 969

Query: 702  EIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLIKYSCGEMCTTEQ 761
            E++   E+ +++  +  ++         P LE+E +D D+  D   LI        +TEQ
Sbjct: 970  EVQVKYEEMKRQSHINPSLMR------QPQLEYEVTDKDVVVDTAYLILSHVDSQLSTEQ 1023



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 42/69 (60%), Positives = 49/69 (71%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFN 105
           NDAL+YL  VK  F D  + Y+ FL++MKDFK+  IDT GVI RV  LF G+ DLI GFN
Sbjct: 257 NDALSYLDQVKVQFADHPDVYNKFLDIMKDFKSGAIDTPGVIGRVSTLFAGNPDLIQGFN 316

Query: 106 TFLPKGYEI 114
           TFLP GY I
Sbjct: 317 TFLPPGYRI 325



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 80/298 (26%), Positives = 131/298 (43%), Gaps = 29/298 (9%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           + PVEF  AI++VNKIK RF     +YK FL+IL  Y++E+K I +VY +V  LF+  PD
Sbjct: 470 RGPVEFNHAISYVNKIKNRFSAHPDIYKQFLEILQTYQRESKPIQDVYSQVTHLFKTAPD 529

Query: 186 LLEEFTHFLPDSSGAASIHYVPSGR----NSILRDRSSAMPTARQVHVDKKERAMASHAD 241
           LLE+F  FLP+S+ AA      + +    N ++ +  +         V  +E  M +   
Sbjct: 530 LLEDFKQFLPESAAAAKTAAERARQEAEGNVLISNVRNEGAGGMYSPVMSRENQMGT--- 586

Query: 242 RDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERRDDHRR---ERERDDRDFENDVNRDFS 298
                    P H R L            K+ +R+ + R+   +R  D     +     F 
Sbjct: 587 ---------PGHARGLPPVGNFAPTPASKDNKRKRNDRQGTADRIPDGVPGLSSAKPQFQ 637

Query: 299 MQRFPHKRKSARKIEDSTAEPLHQGGEGDENFGMHPVSSSYDDKNAMKSMFSQELSFCEK 358
            Q  P+KR   + +      P  Q           P+        A  S   +EL F +K
Sbjct: 638 AQ--PNKRMKTQPVAKG---PNDQPPTSPTLIPQLPMPLEPTTTTAANS---EELGFFDK 689

Query: 359 VKDKL--RDDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLARCEK 414
            K  +  ++ + EFL+  +L+++++I RS L       +G   +L+     ++   EK
Sbjct: 690 AKKAIGNKNVFNEFLKLCNLFSQDLIERSTLVYRAQMFIGGNAELVAWLKQWVGYDEK 747



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 64/303 (21%), Positives = 110/303 (36%), Gaps = 44/303 (14%)

Query: 131 FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEF 190
             +A+++++++K +F     VY  FLDI+  ++        V   V  LF  +PDL++ F
Sbjct: 256 LNDALSYLDQVKVQFADHPDVYNKFLDIMKDFKSGAIDTPGVIGRVSTLFAGNPDLIQGF 315

Query: 191 THFLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQVHVDKKERAMASHADRDLS----- 245
             FLP        + +  G            P    V    + R ++   D + +     
Sbjct: 316 NTFLPPG------YRIECGAGDDPNSIRVTTPMGTTVQAMPQPRPLSRLGDHEGTRPSNG 369

Query: 246 VDRPDPDHDRVLLKSDKDQRRRG----------------EKERERRDDHRRERERDDRDF 289
              P P      +      R  G                 ++ E+R  H++E +R     
Sbjct: 370 TYTPQPGPSSAHMAFSPSGRPLGPVTAHQHQHLSPHEAASQQEEQRAIHQQE-QRGLNSL 428

Query: 290 ENDVNR---DFSMQRFPHKRKSARKIEDSTAEPLHQGGEGDENFGMHPVSSSYDDKNAMK 346
           +  V+      S++     R S   +    A  L   G G+E  G    + +    N +K
Sbjct: 429 QTAVSTAAGGTSLRAGISPRASP--MPGQVAADLAASGAGEEKRGPVEFNHAISYVNKIK 486

Query: 347 SMFSQELSFCEKVKDKLRDDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFN 406
           + FS              D Y++FL  L  Y +E     ++ S V  L    PDL++ F 
Sbjct: 487 NRFSAH-----------PDIYKQFLEILQTYQRESKPIQDVYSQVTHLFKTAPDLLEDFK 535

Query: 407 GFL 409
            FL
Sbjct: 536 QFL 538



 Score = 48.1 bits (113), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 4/99 (4%)

Query: 16  RPMISSRGEP-SGQTQVVGGGGGGGAQK---LTTNDALAYLKAVKDIFQDKREKYDDFLE 71
           R  IS R  P  GQ        G G +K   +  N A++Y+  +K+ F    + Y  FLE
Sbjct: 442 RAGISPRASPMPGQVAADLAASGAGEEKRGPVEFNHAISYVNKIKNRFSAHPDIYKQFLE 501

Query: 72  VMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPK 110
           +++ ++ +      V ++V  LFK   DL+  F  FLP+
Sbjct: 502 ILQTYQRESKPIQDVYSQVTHLFKTAPDLLEDFKQFLPE 540


>gi|121719928|ref|XP_001276662.1| sin3b [Aspergillus clavatus NRRL 1]
 gi|119404874|gb|EAW15236.1| sin3b [Aspergillus clavatus NRRL 1]
          Length = 1622

 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 96/284 (33%), Positives = 139/284 (48%), Gaps = 31/284 (10%)

Query: 483  MSMYSSKDKYL-AKPIQEL---DLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDH 538
            M +   +DK +  KP QEL   +LS+C    PSYRLLPK       S R +L   VLND 
Sbjct: 806  MHIEEPEDKIIETKPKQELGVVNLSHCRSLGPSYRLLPKRERQKPCSGRDQLCYSVLNDE 865

Query: 539  WVS-VTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNN 597
            W S  T  SED  F   RKNQ+E++L R E+DR + D  +E+   T + +E ++++    
Sbjct: 866  WASHPTWESEDSGFVAHRKNQFEDALHRIEEDRHDYDHHIEACTRTIQLIEPIVQQF--- 922

Query: 598  TIKTDG-------PIRVEDHFTALNLRCIERLYG-DHGLDVMDVLRKNASLALPVILTRL 649
             + TD        P  +     A+  R I+++Y    G  ++  +       LP++L RL
Sbjct: 923  LVMTDAERAAFKLPPGLGGQSEAIYQRVIKKVYDRQRGARIIREMFDRPCHVLPIVLFRL 982

Query: 650  KQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEK 709
            KQK EEW   + +++KVW E   K Y +SLDH++   K  D K   AK +  EI+   E 
Sbjct: 983  KQKCEEWKASQREWDKVWREQTQKAYWRSLDHQAIASKAIDKKLFVAKHIQNEIQSKFED 1042

Query: 710  KRKEDDVLLAIAAGNRRSIVP----HLEFEYSDPDIHEDLYQLI 749
             R           G R+S  P      EF + DP +  D  QL+
Sbjct: 1043 AR-----------GLRKSGFPVSRYQFEFTFDDPAVLIDATQLL 1075



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 51/104 (49%), Positives = 62/104 (59%), Gaps = 6/104 (5%)

Query: 18  MISSRGEP-SGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDF 76
           M ++ G P  G    +  G     Q+   NDAL+YL  VK  F D+ + Y+ FL++MKDF
Sbjct: 248 MFNASGAPIPGNVAALAQG-----QQPILNDALSYLDQVKVRFVDQPDVYNRFLDIMKDF 302

Query: 77  KAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLED 120
           K+Q IDT GVI RV  LF GH  LI GFNTFLP GY I    ED
Sbjct: 303 KSQAIDTPGVIQRVSTLFNGHPALIQGFNTFLPPGYRIECGTED 346



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 38/72 (52%), Positives = 50/72 (69%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           + PVEF  AI++VNKIK RF     +YK FL+IL  Y++E+K I +VY +V  LF   PD
Sbjct: 530 RGPVEFNHAISYVNKIKNRFASAPEIYKQFLEILQTYQRESKPIQDVYAQVTQLFNTAPD 589

Query: 186 LLEEFTHFLPDS 197
           LLE+F  FLP+S
Sbjct: 590 LLEDFKQFLPES 601



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 1/70 (1%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           ++P+   +A+++++++K RF     VY  FLDI+  ++ +      V Q V  LF  HP 
Sbjct: 267 QQPI-LNDALSYLDQVKVRFVDQPDVYNRFLDIMKDFKSQAIDTPGVIQRVSTLFNGHPA 325

Query: 186 LLEEFTHFLP 195
           L++ F  FLP
Sbjct: 326 LIQGFNTFLP 335



 Score = 45.8 bits (107), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 36/65 (55%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFN 105
           N A++Y+  +K+ F    E Y  FLE+++ ++ +      V A+V +LF    DL+  F 
Sbjct: 536 NHAISYVNKIKNRFASAPEIYKQFLEILQTYQRESKPIQDVYAQVTQLFNTAPDLLEDFK 595

Query: 106 TFLPK 110
            FLP+
Sbjct: 596 QFLPE 600



 Score = 40.0 bits (92), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 23/86 (26%), Positives = 46/86 (53%), Gaps = 3/86 (3%)

Query: 345 MKSMFSQELSFCEKVKDKL--RDDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLM 402
           M +   +E++F ++VK  +  +  + EFL+  +LY+ ++I R+ L       +G  P+LM
Sbjct: 740 MMTPSQEEVAFFDRVKKYIGNKSMFNEFLKLCNLYSTDLIDRNVLVKRAAQYIGSNPELM 799

Query: 403 DGFNGFLARCEKSEELLADVMSKKSL 428
             F  F+   E+ E+ + +   K+ L
Sbjct: 800 AWFKRFM-HIEEPEDKIIETKPKQEL 824


>gi|340923978|gb|EGS18881.1| putative paired amphipathic helix protein [Chaetomium thermophilum
            var. thermophilum DSM 1495]
          Length = 1974

 Score =  128 bits (322), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/295 (32%), Positives = 145/295 (49%), Gaps = 33/295 (11%)

Query: 496  PIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHM 554
            P   + LSNC    PSYRLLPK   +   S R EL   VLND W S  T  SED  F   
Sbjct: 941  PTGRVSLSNCRGFGPSYRLLPKRERLKPCSGRDELCRSVLNDEWASHPTWASEDSGFVAH 1000

Query: 555  RKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF--- 611
            RKN YEE L R E++R + D  +E+     ++  +LLE I    +    P+    +F   
Sbjct: 1001 RKNGYEEGLHRIEEERHDYDFYIEA----NQKCIQLLEPIAQQMLSL--PVHERANFKMP 1054

Query: 612  -------TALNLRCIERLYG-DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDF 663
                   T++  R ++++YG + G +V + L KN    +P+++ RLKQK EEW   + ++
Sbjct: 1055 AGLGGQSTSIYKRVLKKIYGPEKGCEVANDLFKNPFTVVPIVMARLKQKDEEWRFTQREW 1114

Query: 664  NKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAG 723
             KVW       + KSLDH     K  D ++L AK L   IK   E++R+     +  A G
Sbjct: 1115 EKVWQAQTEAMHLKSLDHMGIQVKTNDKRNLAAKHLVDLIKTKHEEQRR-----IRAAKG 1169

Query: 724  NRRSIVPHLEFEYS--DPDIHEDLYQ---LIKYSCGEMCTTEQLDKVMKIWTTFL 773
                  P  +F YS  D  +  DL +   L  ++ G+    E+  ++++ + TF+
Sbjct: 1170 K----TPRYQFLYSFKDESLLLDLLRFMVLYAHNAGQHNAQER-RRILEFFETFI 1219



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 45/75 (60%), Positives = 56/75 (74%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFN 105
           NDAL+YL  VK  F ++ + Y+ FL++MKDFK+Q IDT GVI+RV ELF GH +LI GFN
Sbjct: 457 NDALSYLDQVKVQFHEQPDVYNRFLDIMKDFKSQTIDTPGVISRVSELFAGHPNLIQGFN 516

Query: 106 TFLPKGYEITLPLED 120
           TFLP GY I   LE+
Sbjct: 517 TFLPPGYRIECGLEN 531



 Score = 90.1 bits (222), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 48/111 (43%), Positives = 65/111 (58%), Gaps = 3/111 (2%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           + PVEF  AI++VNKIK RFQ    +YK FL+IL  Y++E K I +VY +V +LF   PD
Sbjct: 666 RGPVEFNHAISYVNKIKNRFQDKPEIYKQFLEILQTYQREQKPIQDVYSQVTSLFHSAPD 725

Query: 186 LLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQVHVDKKERAM 236
           LLE+F  FLP+S  AA    +P  R         A PT +  H+ ++   M
Sbjct: 726 LLEDFKQFLPES--AAQTRPMPQ-RPEDNMPMPMATPTPQPGHIAREGPKM 773



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 62/303 (20%), Positives = 121/303 (39%), Gaps = 48/303 (15%)

Query: 131 FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEF 190
             +A+++++++K +F     VY  FLDI+  ++ +      V   V  LF  HP+L++ F
Sbjct: 456 LNDALSYLDQVKVQFHEQPDVYNRFLDIMKDFKSQTIDTPGVISRVSELFAGHPNLIQGF 515

Query: 191 THFLPD------------------SSGAASIHYVPSGRNSILRDRSSAMPTARQVHVDKK 232
             FLP                   +   ++IH + +GR +   + +   P   Q +++ +
Sbjct: 516 NTFLPPGYRIECGLENNPNSIRVTTPSGSTIHSIGAGRTA-QHEPAQPAPGPSQGYLNPR 574

Query: 233 ---ERAMASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERRDDHRRERERDDRDF 289
              ++   +H     SV+ P+  +   +          G  +    D+    ++R     
Sbjct: 575 PGWQQPQLAH-----SVESPEATYS--VPSQSAPSGYPGPGQAGHYDNTSPVQQRAAPTA 627

Query: 290 ENDVNRDFSMQRFPHKRKSARKIEDSTAEPLHQGGEGDENFGMHPVSSSYDDKNAMKSMF 349
            +         R  H    A     STA P  Q              S+ + +  ++  F
Sbjct: 628 PSGPPLSHGPPRTTHTPVPAAGPPPSTAGPGQQ--------------SNLEKRGPVE--F 671

Query: 350 SQELSFCEKVKDKLRDD---YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFN 406
           +  +S+  K+K++ +D    Y++FL  L  Y +E     ++ S V  L    PDL++ F 
Sbjct: 672 NHAISYVNKIKNRFQDKPEIYKQFLEILQTYQREQKPIQDVYSQVTSLFHSAPDLLEDFK 731

Query: 407 GFL 409
            FL
Sbjct: 732 QFL 734



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 4/84 (4%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFN 105
           N A++Y+  +K+ FQDK E Y  FLE+++ ++ ++     V ++V  LF    DL+  F 
Sbjct: 672 NHAISYVNKIKNRFQDKPEIYKQFLEILQTYQREQKPIQDVYSQVTSLFHSAPDLLEDFK 731

Query: 106 TFLPKGYEITLPL----EDEQPPP 125
            FLP+    T P+    ED  P P
Sbjct: 732 QFLPESAAQTRPMPQRPEDNMPMP 755


>gi|258577999|ref|XP_002543181.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
 gi|237903447|gb|EEP77848.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
          Length = 798

 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 88/244 (36%), Positives = 131/244 (53%), Gaps = 19/244 (7%)

Query: 500 LDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMRKNQ 558
           ++L++C    PSYRLLPK       S R EL   VLND W S  T  SED  F   RKNQ
Sbjct: 21  VNLAHCRALGPSYRLLPKLERQKPCSGRDELCQSVLNDEWASHPTWASEDSGFVAHRKNQ 80

Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDG-----PIRVEDHFTA 613
           +E+SL R E+DR + D  +E+   T + +E LL++++  + +TD      P  +      
Sbjct: 81  HEDSLHRVEEDRHDYDHYIEAGIRTIQLMEALLQQVSVMS-ETDRANFKLPPGLGGQSET 139

Query: 614 LNLRCIERLY-GDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYS 672
           +  + I+++Y  ++GL +++ L  N S  LP+++ RLKQK EEW   + ++ KVW E   
Sbjct: 140 IYKKVIKKIYEKEYGLRILEELFLNPSQVLPIVIARLKQKIEEWKLSQREWEKVWREQMQ 199

Query: 673 KNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHL 732
           K Y +SLDH+S   K+ D K L  K   AEI+   E+ R             RRS  P L
Sbjct: 200 KGYWRSLDHQSSINKKDDKKLLTTKHFQAEIQAKFEEAR-----------ALRRSGYPVL 248

Query: 733 EFEY 736
            +++
Sbjct: 249 SYQF 252


>gi|213401895|ref|XP_002171720.1| SIN3 family co-repressor [Schizosaccharomyces japonicus yFS275]
 gi|211999767|gb|EEB05427.1| SIN3 family co-repressor [Schizosaccharomyces japonicus yFS275]
          Length = 1135

 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 79/207 (38%), Positives = 100/207 (48%), Gaps = 51/207 (24%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
           L   DAL+YL+ VK  F D+ E YD +L +MK+FKAQ I    VI +V  LF  +  LI 
Sbjct: 91  LNVKDALSYLELVKHQFTDRPEVYDQYLAIMKEFKAQSITIPEVIEQVSTLFHDYPHLIE 150

Query: 103 GFNTFLPKGYEI------TLPLED-----EQPPP-------------------------- 125
           GFN FLP GY +        P  +      QPPP                          
Sbjct: 151 GFNNFLPLGYRVKGKQAAPQPTPNATSTTSQPPPLAAPGSSSLPPSSPALANWTIPGSTA 210

Query: 126 --------------KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITE 171
                         K  V+F  AI ++NK+K RF  +   Y +FL IL  Y+KE K++ E
Sbjct: 211 SPRPAPSSPSTFSPKPQVDFNYAIAYMNKVKARFPPNSGTYLNFLSILRTYQKEQKTLQE 270

Query: 172 VYQEVEALFQDHPDLLEEFTHFLPDSS 198
           V Q+V  LF D PDLLEEF  FLPD+S
Sbjct: 271 VRQQVSQLFVDAPDLLEEFKLFLPDNS 297



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 97/203 (47%), Gaps = 23/203 (11%)

Query: 524 ASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELD----MLLES 579
            S R  L  EVLND ++ VT+ S   +     +NQY E+L   ED+R E D    +  E+
Sbjct: 482 CSGRDSLCNEVLNDTYLCVTNYSAFLTKPSHYENQYAEALQLVEDERCEYDWSITIFEET 541

Query: 580 VNVTTKRVEELLEKINNNTIKTDGPIRVEDHFTALNLR------CIERLYGDHG-LDVMD 632
           + + ++     L  I +     DG        T LN R       +++LYG    + V  
Sbjct: 542 IGILSR-----LAGIKSPKADMDGE-------TELNKRSFVVKSALKKLYGQECYMQVYS 589

Query: 633 VLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSK 692
            + KN      V++ RLK+K  EW R R ++ +VW ++   NY  +++ R    +  D +
Sbjct: 590 AVLKNPPTNALVVIRRLKEKHNEWTRHRREWKRVWGQVERNNYKPAMNIRFCEIEGADRR 649

Query: 693 SLGAKALSAEIKEISEKKRKEDD 715
           +L A+ L  EI +  +++++  D
Sbjct: 650 NLSARRLIKEIDDHYQRQKQRID 672



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 52/93 (55%), Gaps = 5/93 (5%)

Query: 108 LPK-----GYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMY 162
           LPK     G  +T+     Q    +P+  ++A++++  +K +F     VY  +L I+  +
Sbjct: 65  LPKTPTTAGSNVTVQNSAPQQSETRPLNVKDALSYLELVKHQFTDRPEVYDQYLAIMKEF 124

Query: 163 RKENKSITEVYQEVEALFQDHPDLLEEFTHFLP 195
           + ++ +I EV ++V  LF D+P L+E F +FLP
Sbjct: 125 KAQSITIPEVIEQVSTLFHDYPHLIEGFNNFLP 157


>gi|62825066|gb|AAQ04624.2|AF443185_1 transcriptional repressor Sin3p [Paracoccidioides brasiliensis]
          Length = 1633

 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 75/219 (34%), Positives = 118/219 (53%), Gaps = 6/219 (2%)

Query: 500  LDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMRKNQ 558
            ++LS+C    PSYRLLPK       S R ++   VLND W S  T  SED  F   RKNQ
Sbjct: 845  VNLSHCRALGPSYRLLPKRERQKPCSGRDDMCQSVLNDEWASHPTWASEDSGFVAHRKNQ 904

Query: 559  YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFTA----L 614
            +E++L R E+DR + D  +E+   T + +E L++++   T       ++          +
Sbjct: 905  FEDTLHRIEEDRHDYDHHIEACIRTIQLMEPLVQQMATMTDAERASFKLPPGLGGQSETI 964

Query: 615  NLRCIERLYG-DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSK 673
              R I+++Y  + G  V+D +     + +P++L RLKQK EEW  C+ +++KVW E   K
Sbjct: 965  YKRVIKKIYDRERGQKVIDEMFLRPCMVMPIVLARLKQKCEEWKACQREWDKVWREQMQK 1024

Query: 674  NYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRK 712
             + +SLDH++   K  D K   AK +  EI+   E+ R+
Sbjct: 1025 GFWRSLDHQAIIMKGSDKKLFVAKHIQHEIQAKFEELRR 1063



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 51/111 (45%), Positives = 64/111 (57%), Gaps = 13/111 (11%)

Query: 22  RGEPSGQTQVVGGGGGGG------------AQKLTTNDALAYLKAVKDIFQDKREKYDDF 69
           +G+PS Q+ V+G  G                Q+   NDAL+YL  VK  F ++ + Y+ F
Sbjct: 252 QGQPSQQS-VLGFNGSAPPQISGSVAALAQGQQPILNDALSYLDQVKVRFVEQPDVYNRF 310

Query: 70  LEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLED 120
           L++MKDFK+Q I T GVI RV  LF GH  LI GFNTFLP GY I    ED
Sbjct: 311 LDIMKDFKSQAIYTPGVIQRVSTLFNGHPALIQGFNTFLPPGYRIECGTED 361



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 38/72 (52%), Positives = 49/72 (68%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           + PVEF  AI++VNKIK RF      YK FL+IL  Y++E+K I +VY +V  LF   PD
Sbjct: 545 RGPVEFNHAISYVNKIKNRFADSPDTYKQFLEILQTYQRESKPIQDVYAQVTILFNSAPD 604

Query: 186 LLEEFTHFLPDS 197
           LLE+F  FLP+S
Sbjct: 605 LLEDFKQFLPES 616



 Score = 53.1 bits (126), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 8/97 (8%)

Query: 101 ILGFNTFLPKGYE--ITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDI 158
           +LGFN   P      +    + +QP         +A+++++++K RF     VY  FLDI
Sbjct: 260 VLGFNGSAPPQISGSVAALAQGQQP------ILNDALSYLDQVKVRFVEQPDVYNRFLDI 313

Query: 159 LNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLP 195
           +  ++ +      V Q V  LF  HP L++ F  FLP
Sbjct: 314 MKDFKSQAIYTPGVIQRVSTLFNGHPALIQGFNTFLP 350



 Score = 46.2 bits (108), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 36/65 (55%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFN 105
           N A++Y+  +K+ F D  + Y  FLE+++ ++ +      V A+V  LF    DL+  F 
Sbjct: 551 NHAISYVNKIKNRFADSPDTYKQFLEILQTYQRESKPIQDVYAQVTILFNSAPDLLEDFK 610

Query: 106 TFLPK 110
            FLP+
Sbjct: 611 QFLPE 615


>gi|297850910|ref|XP_002893336.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297339178|gb|EFH69595.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 810

 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 91/253 (35%), Positives = 131/253 (51%), Gaps = 45/253 (17%)

Query: 17  PMISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDF 76
           P  +++G    QT V    G     K T NDA +Y+ +VK+ F D+  KY +FL+++  +
Sbjct: 382 PPEANKGLSQFQTMV----GKSVRPKKTINDARSYIYSVKEAFHDEPAKYAEFLKLLDAY 437

Query: 77  KAQRIDTAGVIARVKELFKGHRDLILGFNTFLP--------KGYEIT-LPLEDEQPPPKK 127
           +A+R+D   VIARV+EL K HRDL+LG + FLP        K  E+T LP  +   PPK 
Sbjct: 438 RARRVDKDSVIARVEELTKDHRDLLLGLSAFLPAATKTIPHKADELTSLPEANRATPPKA 497

Query: 128 ----PVEFEEAI---------------------NFVNKIKTRFQG-DDHVYKSFLDILNM 161
               P++F+  I                     NF+NK+KTRFQ  D+HV  SF  I+ M
Sbjct: 498 SRTIPLKFKITIPPKARRTIPSEAEKPTHSDELNFMNKLKTRFQRIDNHVVGSFRSIMKM 557

Query: 162 YRKENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPS-GRNSILR----- 215
           Y +  KS+ EV++EV  L   H DL+E+F+   PD   + S+   P  GR   L+     
Sbjct: 558 YEEGKKSVKEVHEEVYDLLYYHEDLIEDFSRIFPDPFASTSLLRSPVIGRRVSLKLTMDA 617

Query: 216 DRSSAMPTARQVH 228
           DR +   T +  H
Sbjct: 618 DRLNIASTEKAFH 630



 Score =  108 bits (270), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 67/191 (35%), Positives = 102/191 (53%), Gaps = 36/191 (18%)

Query: 36  GGGGAQKLTTNDALAYLKAVKDIF-QDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELF 94
           G   +   T +DA +++  VK+ F  D+  KY +FL++++  +A RID   ++A V+EL 
Sbjct: 3   GRSLSPAFTLDDARSFVNDVKEAFGADETAKYREFLDILQGLRANRIDYPTLVATVEELL 62

Query: 95  KGHRDLILGFNTF-------------------------LPKGYEITLP---------LED 120
           K H+DL+L FN F                         L +G+ + +P          + 
Sbjct: 63  KDHQDLLLRFNAFFAVEPKDSKGRVCERVKRVLKGHPNLLRGFRVFVPARSTITIASTKS 122

Query: 121 EQPPPKKPVEFEEAINFVNKIKTRFQGDD-HVYKSFLDILNMYRKENKSITEVYQEVEAL 179
           EQ       +     NF+ K+K RFQG+D HVY+SFL+IL MY++ NKS+ ++YQEV AL
Sbjct: 123 EQRAASDNNKRIRVANFITKLKARFQGNDRHVYESFLEILTMYQEGNKSVNDLYQEVIAL 182

Query: 180 FQDHPDLLEEF 190
            Q H DL+ EF
Sbjct: 183 LQGHEDLVMEF 193



 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/171 (36%), Positives = 91/171 (53%), Gaps = 16/171 (9%)

Query: 41  QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDL 100
           ++ T  + + Y+  VK+ F D+  K+D+FL++MKD    +ID A   A + E+ KGH +L
Sbjct: 633 ERTTMRETVTYIAHVKEAFLDEPAKFDEFLKLMKDVCDHKIDEANGSAMMAEIIKGHPNL 692

Query: 101 ILGFNTFLPKGYEI-------TLPLEDEQPPPKKPVEFEE--AINFVNKIKTRFQGD-DH 150
           +L    F PK Y +       T+P +DE     +    ++  A NF+  ++ RFQGD  H
Sbjct: 693 LLRLGVFFPK-YSVNKHKGKRTIPPDDEHGGSAESSNNKKNRAANFMENLEARFQGDGGH 751

Query: 151 VYKSFLDILNMYRKE-NKSITEVYQE----VEALFQDHPDLLEEFTHFLPD 196
           V  S L I+ MY  E NKS  E Y E    V AL Q H DL+ EF  +  D
Sbjct: 752 VVNSVLQIIRMYTIEGNKSKNEAYHEVGFLVVALLQGHVDLIMEFGEYFSD 802



 Score = 72.8 bits (177), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/144 (35%), Positives = 83/144 (57%), Gaps = 14/144 (9%)

Query: 44  TTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILG 103
           T +DA++++ +VK+ F D+  K+ +F  ++ D +  R+D A VIAR+ EL +G+  L+ G
Sbjct: 227 TLDDAVSFIDSVKEAFHDEPAKFHEFKALLNDVRDHRVDNASVIARMNELIRGYPKLLRG 286

Query: 104 FNTFLPKGYEITLPLEDEQPP-----PKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDI 158
              FLP+  EIT+P + EQ P      KK  + E   N +NK++TR   D  V+ +  + 
Sbjct: 287 SRVFLPEA-EITIPPKAEQRPESDGDQKKCADLE---NHMNKLETRL--DTLVFPTMTEK 340

Query: 159 LNMYRKENKSITEVYQEVEALFQD 182
               R   KSI E+++EV  L +D
Sbjct: 341 TYEGR---KSIKELHEEVVFLSED 361



 Score = 42.7 bits (99), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 37/125 (29%), Positives = 55/125 (44%), Gaps = 9/125 (7%)

Query: 131 FEEAINFVNKIKTRFQGDDHV-YKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEE 189
            ++A +FVN +K  F  D+   Y+ FLDIL   R        +   VE L +DH DLL  
Sbjct: 12  LDDARSFVNDVKEAFGADETAKYREFLDILQGLRANRIDYPTLVATVEELLKDHQDLLLR 71

Query: 190 FTHFLP----DSSGAAS--IHYVPSGRNSILRDRSSAMPTARQVHV--DKKERAMASHAD 241
           F  F      DS G     +  V  G  ++LR     +P    + +   K E+  AS  +
Sbjct: 72  FNAFFAVEPKDSKGRVCERVKRVLKGHPNLLRGFRVFVPARSTITIASTKSEQRAASDNN 131

Query: 242 RDLSV 246
           + + V
Sbjct: 132 KRIRV 136


>gi|67522178|ref|XP_659150.1| hypothetical protein AN1546.2 [Aspergillus nidulans FGSC A4]
 gi|40745097|gb|EAA64253.1| hypothetical protein AN1546.2 [Aspergillus nidulans FGSC A4]
 gi|259486872|tpe|CBF85084.1| TPA: transcription factor (Sin3), putative (AFU_orthologue;
            AFUA_8G05570) [Aspergillus nidulans FGSC A4]
          Length = 1605

 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 90/280 (32%), Positives = 138/280 (49%), Gaps = 23/280 (8%)

Query: 483  MSMYSSKDKYL-AKPIQE---LDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDH 538
            M +   +DK +  KP QE   ++LS+C    PSYRLLPK       S R EL   VLND 
Sbjct: 802  MHVEEPEDKIVEVKPKQEPGIVNLSHCRSLGPSYRLLPKRERQKPCSGRDELCRSVLNDE 861

Query: 539  WVS-VTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNN 597
            W S  T  SED  F   RKNQYE++L R E+DR + D  +E+ N T + +E ++++    
Sbjct: 862  WASHPTWASEDSGFVAHRKNQYEDALHRIEEDRHDYDHHIEACNRTIQLIEPIVQQF--- 918

Query: 598  TIKTDG-------PIRVEDHFTALNLRCIERLYG-DHGLDVMDVLRKNASLALPVILTRL 649
             + T+        P  +     A+  R I+++Y    G  ++  + +     LP++L RL
Sbjct: 919  LVMTEAERAAFQLPRGLGGQSEAIYQRVIKKIYDRQRGERIIKEMFERPCHVLPIVLFRL 978

Query: 650  KQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEK 709
            KQK EEW   + +++K+W E   K Y +SLDH++   K  D K   AK +  EI+   E+
Sbjct: 979  KQKCEEWKASQREWDKIWREQMQKAYWRSLDHQAIASKGVDKKLFVAKHIQTEIQAKHEE 1038

Query: 710  KRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLI 749
             +        +            EF ++DP +  D   L+
Sbjct: 1039 SKNLRKSGFQVPKH-------QFEFSFTDPTVLIDATHLL 1071



 Score = 93.2 bits (230), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 52/109 (47%), Positives = 61/109 (55%), Gaps = 13/109 (11%)

Query: 25  PSGQTQVVGGGGGG-----------GAQKLTT--NDALAYLKAVKDIFQDKREKYDDFLE 71
           P GQ  +   GGG            G Q +     DAL+YL  VK  F D+ + Y+ FL+
Sbjct: 242 PPGQPLMAFNGGGPSIPGNVAALAQGQQPILNFCQDALSYLDQVKVRFVDQPDVYNRFLD 301

Query: 72  VMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLED 120
           +MKDFK+Q IDT GVI RV  LF GH  LI GFNTFLP GY I    ED
Sbjct: 302 IMKDFKSQAIDTPGVIQRVSNLFNGHPALIQGFNTFLPPGYRIECGTED 350



 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 39/76 (51%), Positives = 52/76 (68%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           + PVEF  AI++VNKIK RF     +YK FL+IL  Y++E+K I +VY +V  LF   PD
Sbjct: 525 RGPVEFNHAISYVNKIKNRFSSRPEIYKQFLEILQTYQRESKPIGDVYTQVTQLFNSAPD 584

Query: 186 LLEEFTHFLPDSSGAA 201
           LLE+F  FLP+S+  A
Sbjct: 585 LLEDFKQFLPESAAHA 600



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 52/106 (49%), Gaps = 17/106 (16%)

Query: 132 EEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFT 191
           ++A+++++++K RF     VY  FLDI+  ++ +      V Q V  LF  HP L++ F 
Sbjct: 276 QDALSYLDQVKVRFVDQPDVYNRFLDIMKDFKSQAIDTPGVIQRVSNLFNGHPALIQGFN 335

Query: 192 HFLP----------DSSGAASIHYVPSGRNSILRDRSSAMPTARQV 227
            FLP          D+  A  +   PSG N++      +MP AR  
Sbjct: 336 TFLPPGYRIECGTEDNPDAIRV-TTPSGTNTL------SMPRARHT 374



 Score = 47.0 bits (110), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 6/96 (6%)

Query: 21  SRGEPSGQTQVVGGGGGGGAQ------KLTTNDALAYLKAVKDIFQDKREKYDDFLEVMK 74
           S  +P      VG G   G+Q       +  N A++Y+  +K+ F  + E Y  FLE+++
Sbjct: 500 SMTQPMNNLAGVGSGVLQGSQADLKRGPVEFNHAISYVNKIKNRFSSRPEIYKQFLEILQ 559

Query: 75  DFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPK 110
            ++ +      V  +V +LF    DL+  F  FLP+
Sbjct: 560 TYQRESKPIGDVYTQVTQLFNSAPDLLEDFKQFLPE 595


>gi|326470104|gb|EGD94113.1| transcriptional repressor Sin3p [Trichophyton tonsurans CBS 112818]
          Length = 1656

 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 104/335 (31%), Positives = 156/335 (46%), Gaps = 44/335 (13%)

Query: 500  LDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMRKNQ 558
            ++LS+C    PSYRLLPK     + S R EL   VLND W S  T  SED  F   RKNQ
Sbjct: 855  VNLSHCRALGPSYRLLPKRERQKACSGRDELCRSVLNDDWASHPTWASEDSGFVAHRKNQ 914

Query: 559  YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDG-------PIRVEDHF 611
            YE++L R E+DR + D  +E+   T + +E L+++I   ++ +D        P  +    
Sbjct: 915  YEDALHRIEEDRHDYDHHIEACIRTIQLLEPLVQQI---SLMSDSDRSSFKLPPGLGGQS 971

Query: 612  TALNLRCIERLYG-DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEI 670
              +  R I+++Y  + G  V++ +     L LP++L RLKQK EEW   + +++KVW E 
Sbjct: 972  ETIYRRVIKKIYDREPGQRVIEEMFNRPCLVLPIVLARLKQKCEEWKATQREWDKVWREQ 1031

Query: 671  YSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVP 730
              K + +SLDH++   K  D K   +K +  EI+   E+ R            NRR    
Sbjct: 1032 MQKGFWRSLDHQAIIMKGNDKKVFLSKHIQHEIQTKFEEGR------------NRRRTGV 1079

Query: 731  H-----LEFEYSDPDIHEDLYQL----IKYSCGEMCTTEQLDKVMKIWTTFLEPMLGVPS 781
            H     ++F + D ++  D   L    + +S        Q  +VM     F+    G+  
Sbjct: 1080 HVSNYQMDFAFEDSEVVLDATHLLLCYLDHSSAGFGADPQ--RVMAFIKDFIPVFFGI-- 1135

Query: 782  RPQGAEDTEDVVKAKSHTVKSRAASV-GDSDGSPD 815
                  D E      S    S +AS   D D SPD
Sbjct: 1136 ------DREAFKNYLSEVYDSSSASEDADDDSSPD 1164



 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 49/90 (54%), Positives = 58/90 (64%), Gaps = 1/90 (1%)

Query: 26  SGQTQVVGGGGG-GGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTA 84
           SG +QV G        Q+   NDAL+YL  VK  F ++ E Y+ FL++MKDFK+Q IDT 
Sbjct: 277 SGPSQVPGSVAALAQGQQPILNDALSYLDQVKVRFVEQPEVYNRFLDIMKDFKSQAIDTP 336

Query: 85  GVIARVKELFKGHRDLILGFNTFLPKGYEI 114
           GVI RV  LF GH  LI GFNTFLP GY I
Sbjct: 337 GVIQRVSTLFNGHPALIQGFNTFLPPGYRI 366



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/87 (49%), Positives = 56/87 (64%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           + PVEF  AI++VNKIK RF     +YK FL+IL  Y++E+K I +VY +V  LF   PD
Sbjct: 557 RGPVEFNHAISYVNKIKNRFSDSPEIYKQFLEILQTYQRESKPIQDVYTQVTHLFGAAPD 616

Query: 186 LLEEFTHFLPDSSGAASIHYVPSGRNS 212
           LLE+F  FLP+S+  A     PS R S
Sbjct: 617 LLEDFKQFLPESAAQAKAQATPSTRQS 643



 Score = 72.8 bits (177), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 73/355 (20%), Positives = 132/355 (37%), Gaps = 57/355 (16%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           ++P+   +A+++++++K RF     VY  FLDI+  ++ +      V Q V  LF  HP 
Sbjct: 293 QQPI-LNDALSYLDQVKVRFVEQPEVYNRFLDIMKDFKSQAIDTPGVIQRVSTLFNGHPA 351

Query: 186 LLEEFTHFLP----------DSSGAASIHYVPSGRNSILRDRSS---------------A 220
           L++ F  FLP          D+  A  +   PSG N+I     S               +
Sbjct: 352 LIQGFNTFLPPGYRIECGTDDNPDAIRV-TTPSGTNTISMQSGSRPPLGGPEGAGPAVQS 410

Query: 221 MPTARQVHVDKKERAM----------ASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEK 270
            P +R  + D+   A             H         P   H    +   + Q R    
Sbjct: 411 APASRPEYYDQPRSAWQHGHAQQQAQPGHPSGAPGSYSPKSQHMAAGMYGQQQQTRHNPS 470

Query: 271 ERERRDDH---------------RRERERDDRDFENDVNRDFSMQRFPHKRKSARKIEDS 315
           +  + D                  ++ +R     +N V+   S  R P  +         
Sbjct: 471 QDTQYDYQAQHEQQASSEAASMVHQQEQRGVSQLQNAVSVASSASRQPMMQLPPGSHTPG 530

Query: 316 TAEPLHQGGEGDENFGMHPVSSSYDDKNAMKSMFSQELSFCEKVKDKLRDD---YQEFLR 372
            ++P+     G    G+ P       +  ++  F+  +S+  K+K++  D    Y++FL 
Sbjct: 531 PSQPMGSMAAGMGPSGVMPGQVDASKRGPVE--FNHAISYVNKIKNRFSDSPEIYKQFLE 588

Query: 373 CLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLARCEKSEELLADVMSKKS 427
            L  Y +E     ++ + V  L G  PDL++ F  FL       +  A   +++S
Sbjct: 589 ILQTYQRESKPIQDVYTQVTHLFGAAPDLLEDFKQFLPESAAQAKAQATPSTRQS 643



 Score = 47.0 bits (110), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 35/65 (53%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFN 105
           N A++Y+  +K+ F D  E Y  FLE+++ ++ +      V  +V  LF    DL+  F 
Sbjct: 563 NHAISYVNKIKNRFSDSPEIYKQFLEILQTYQRESKPIQDVYTQVTHLFGAAPDLLEDFK 622

Query: 106 TFLPK 110
            FLP+
Sbjct: 623 QFLPE 627


>gi|302661082|ref|XP_003022212.1| hypothetical protein TRV_03663 [Trichophyton verrucosum HKI 0517]
 gi|291186148|gb|EFE41594.1| hypothetical protein TRV_03663 [Trichophyton verrucosum HKI 0517]
          Length = 1367

 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 104/335 (31%), Positives = 156/335 (46%), Gaps = 44/335 (13%)

Query: 500 LDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMRKNQ 558
           ++LS+C    PSYRLLPK     + S R EL   VLND W S  T  SED  F   RKNQ
Sbjct: 563 VNLSHCRALGPSYRLLPKRERQKACSGRDELCRSVLNDDWASHPTWASEDSGFVAHRKNQ 622

Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDG-------PIRVEDHF 611
           YE++L R E+DR + D  +E+   T + +E L+++I   ++ +D        P  +    
Sbjct: 623 YEDALHRIEEDRHDYDHHIEACIRTIQLLEPLVQQI---SLMSDSDRSSFKLPPGLGGQS 679

Query: 612 TALNLRCIERLYG-DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEI 670
             +  R I+++Y  + G  V++ +     L LP++L RLKQK EEW   + +++KVW E 
Sbjct: 680 ETIYRRVIKKIYDREPGQRVIEEMFNRPCLVLPIVLARLKQKCEEWKATQREWDKVWREQ 739

Query: 671 YSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVP 730
             K + +SLDH++   K  D K   +K +  EI+   E+ R            NRR    
Sbjct: 740 MQKGFWRSLDHQAIIMKGNDKKVFLSKHIQHEIQTKFEEGR------------NRRRTGV 787

Query: 731 H-----LEFEYSDPDIHEDLYQL----IKYSCGEMCTTEQLDKVMKIWTTFLEPMLGVPS 781
           H     ++F + D ++  D   L    + +S        Q  +VM     F+    G+  
Sbjct: 788 HVSNYQMDFAFEDSEVVLDATHLLLCYLDHSSAGFGADPQ--RVMAFIKDFIPVFFGI-- 843

Query: 782 RPQGAEDTEDVVKAKSHTVKSRAASV-GDSDGSPD 815
                 D E      S    S +AS   D D SPD
Sbjct: 844 ------DREAFKNYLSEVYDSSSASEDADDDSSPD 872



 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 42/68 (61%), Positives = 49/68 (72%)

Query: 47  DALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNT 106
           DAL+YL  VK  F ++ E Y+ FL++MKDFK+Q IDT GVI RV  LF GH  LI GFNT
Sbjct: 7   DALSYLDQVKVRFVEQPEVYNRFLDIMKDFKSQAIDTPGVIQRVSTLFNGHPALIQGFNT 66

Query: 107 FLPKGYEI 114
           FLP GY I
Sbjct: 67  FLPPGYRI 74



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 38/72 (52%), Positives = 50/72 (69%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           + PVEF  AI++VNKIK RF     +YK FL+IL  Y++E+K I +VY +V  LF   PD
Sbjct: 265 RGPVEFNHAISYVNKIKNRFSDSPEIYKQFLEILQTYQRESKPIQDVYTQVTHLFGAAPD 324

Query: 186 LLEEFTHFLPDS 197
           LLE+F  FLP+S
Sbjct: 325 LLEDFKQFLPES 336



 Score = 66.6 bits (161), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 69/330 (20%), Positives = 120/330 (36%), Gaps = 54/330 (16%)

Query: 132 EEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFT 191
           ++A+++++++K RF     VY  FLDI+  ++ +      V Q V  LF  HP L++ F 
Sbjct: 6   QDALSYLDQVKVRFVEQPEVYNRFLDIMKDFKSQAIDTPGVIQRVSTLFNGHPALIQGFN 65

Query: 192 HFLP---------DSSGAASIHYVPSGRNSILRDRSS---------AMPTARQVHVDKKE 233
            FLP         D +  A     PSG N+I     S         A P  +     + E
Sbjct: 66  TFLPPGYRIECGTDDNPDAIRVTTPSGTNTISMQSGSRPSLGAPEGAGPAVQSASASRPE 125

Query: 234 ----------------RAMASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERRDD 277
                           +A   H         P   H    +   + Q R    +  + D 
Sbjct: 126 YYDQPRSAWQHGHAQQQAQPGHPSGAPGSYSPKSQHMAAGMYGQQQQSRHNPSQDTQYDY 185

Query: 278 H---------------RRERERDDRDFENDVNRDFSMQRFPHKRKSARKIEDSTAEPLHQ 322
                            ++ +R     +N V+      R P  +          ++P+  
Sbjct: 186 QAQHEQQASSEAASMVHQQEQRGVSQLQNAVSVASGASRQPMMQLPPGSHTPGPSQPMGS 245

Query: 323 GGEGDENFGMHPVSSSYDDKNAMKSMFSQELSFCEKVKDKLRDD---YQEFLRCLHLYTK 379
              G    G+ P       +  ++  F+  +S+  K+K++  D    Y++FL  L  Y +
Sbjct: 246 MAAGMGPSGVMPGQVDASKRGPVE--FNHAISYVNKIKNRFSDSPEIYKQFLEILQTYQR 303

Query: 380 EIITRSELQSLVGDLLGRYPDLMDGFNGFL 409
           E     ++ + V  L G  PDL++ F  FL
Sbjct: 304 ESKPIQDVYTQVTHLFGAAPDLLEDFKQFL 333



 Score = 46.2 bits (108), Expect = 0.096,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 35/65 (53%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFN 105
           N A++Y+  +K+ F D  E Y  FLE+++ ++ +      V  +V  LF    DL+  F 
Sbjct: 271 NHAISYVNKIKNRFSDSPEIYKQFLEILQTYQRESKPIQDVYTQVTHLFGAAPDLLEDFK 330

Query: 106 TFLPK 110
            FLP+
Sbjct: 331 QFLPE 335


>gi|398402610|ref|XP_003853229.1| histone deacetylase complex protein, partial [Zymoseptoria tritici
           IPO323]
 gi|339473111|gb|EGP88205.1| histone deacetylase complex protein [Zymoseptoria tritici IPO323]
          Length = 1274

 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 104/342 (30%), Positives = 161/342 (47%), Gaps = 26/342 (7%)

Query: 496 PIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHM 554
           P   + LSNC    PSYRLLPK       S R EL   VLND W S  T  SED  F   
Sbjct: 626 PSGRVMLSNCRGLGPSYRLLPKRERQKPCSGRDELCNSVLNDEWASHPTWASEDSGFIAH 685

Query: 555 RKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEEL---LEKINNNTIKT-DGPIRVEDH 610
           RKN +EE L R E++R + D  +E+ + T + +E +   L ++++++ +T   P  +   
Sbjct: 686 RKNLHEEGLHRIEEERHDYDFNIETCSRTIQLMEPIATQLRRMDDHSQRTYTLPPGLGGQ 745

Query: 611 FTALNLRCIERLYG-DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAE 669
              +  R I +LY  + G +V+  L +     +PV+L RLK++ E W   + ++ KVW E
Sbjct: 746 SETIYKRVIMKLYARERGAEVIQSLHERPYQVIPVLLNRLKERLESWKMAQREWEKVWRE 805

Query: 670 IYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIV 729
              K + KSLDH++   KQ D +    K L  EI+   E+ ++         AGN    +
Sbjct: 806 QTQKMFWKSLDHQAASAKQNDRRQFQLKTLQGEIQVRYEEMKR---------AGNANPAL 856

Query: 730 ---PHLEFEYSDPDIHEDLYQLIKYSCGEMCTTEQLDKVMKIWTTFLEPMLGVPSRPQGA 786
              P +EF   D D+  D   L+         T+Q  K+      F+    G+      A
Sbjct: 857 LRQPQMEFTVDDIDVLYDTTYLVLSHVEATLATDQ-PKLFNFIRDFVPLFFGL-----DA 910

Query: 787 EDTEDVVKAKSHTVKSRAASVGDSDGSPDGDAAAMTSKHSNP 828
           E+  D  K      +S  + + D + S   D+A+M S+ + P
Sbjct: 911 ENFRD--KMHGRFDRSPNSEMVDDEASGAEDSASMKSRKTGP 950



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 41/69 (59%), Positives = 48/69 (69%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFN 105
           NDAL+YL  VK  F D  + Y+ FL++MKDFK+  IDT GVI RV  LF G+  LI GFN
Sbjct: 121 NDALSYLDQVKVQFADHPDVYNRFLDIMKDFKSGAIDTPGVIGRVSTLFAGNPQLIQGFN 180

Query: 106 TFLPKGYEI 114
           TFLP GY I
Sbjct: 181 TFLPPGYRI 189



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 38/72 (52%), Positives = 51/72 (70%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           + PVEF  AI++VNKIK RF     +YK FL+IL  Y++E+K I +VY +V  LF+  PD
Sbjct: 335 RGPVEFNHAISYVNKIKNRFSAHPDIYKQFLEILQTYQRESKPIQDVYGQVTHLFKTAPD 394

Query: 186 LLEEFTHFLPDS 197
           LLE+F  FLP+S
Sbjct: 395 LLEDFKQFLPES 406



 Score = 43.9 bits (102), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 19/65 (29%), Positives = 34/65 (52%)

Query: 131 FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEF 190
             +A+++++++K +F     VY  FLDI+  ++        V   V  LF  +P L++ F
Sbjct: 120 LNDALSYLDQVKVQFADHPDVYNRFLDIMKDFKSGAIDTPGVIGRVSTLFAGNPQLIQGF 179

Query: 191 THFLP 195
             FLP
Sbjct: 180 NTFLP 184



 Score = 43.1 bits (100), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 20/65 (30%), Positives = 35/65 (53%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFN 105
           N A++Y+  +K+ F    + Y  FLE+++ ++ +      V  +V  LFK   DL+  F 
Sbjct: 341 NHAISYVNKIKNRFSAHPDIYKQFLEILQTYQRESKPIQDVYGQVTHLFKTAPDLLEDFK 400

Query: 106 TFLPK 110
            FLP+
Sbjct: 401 QFLPE 405


>gi|302507182|ref|XP_003015552.1| hypothetical protein ARB_05863 [Arthroderma benhamiae CBS 112371]
 gi|291179120|gb|EFE34907.1| hypothetical protein ARB_05863 [Arthroderma benhamiae CBS 112371]
          Length = 1367

 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 104/335 (31%), Positives = 156/335 (46%), Gaps = 44/335 (13%)

Query: 500 LDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMRKNQ 558
           ++LS+C    PSYRLLPK     + S R EL   VLND W S  T  SED  F   RKNQ
Sbjct: 563 VNLSHCRALGPSYRLLPKRERQKACSGRDELCRSVLNDDWASHPTWASEDSGFVAHRKNQ 622

Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDG-------PIRVEDHF 611
           YE++L R E+DR + D  +E+   T + +E L+++I   ++ +D        P  +    
Sbjct: 623 YEDALHRIEEDRHDYDHHIEACIRTIQLLEPLVQQI---SLMSDSDRSSFKLPPGLGGQS 679

Query: 612 TALNLRCIERLYG-DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEI 670
             +  R I+++Y  + G  V++ +     L LP++L RLKQK EEW   + +++KVW E 
Sbjct: 680 ETIYRRVIKKIYDREPGQRVIEEMFNRPCLVLPIVLARLKQKCEEWKATQREWDKVWREQ 739

Query: 671 YSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVP 730
             K + +SLDH++   K  D K   +K +  EI+   E+ R            NRR    
Sbjct: 740 MQKGFWRSLDHQAIIMKGNDKKVFLSKHIQHEIQTKFEEGR------------NRRRTGV 787

Query: 731 H-----LEFEYSDPDIHEDLYQL----IKYSCGEMCTTEQLDKVMKIWTTFLEPMLGVPS 781
           H     ++F + D ++  D   L    + +S        Q  +VM     F+    G+  
Sbjct: 788 HVSNYQMDFAFEDSEVVLDATHLLLCYLDHSSAGFGADPQ--RVMAFIKDFIPVFFGI-- 843

Query: 782 RPQGAEDTEDVVKAKSHTVKSRAASV-GDSDGSPD 815
                 D E      S    S +AS   D D SPD
Sbjct: 844 ------DREAFKNYLSEVYDSSSASEDADDDSSPD 872



 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 43/87 (49%), Positives = 56/87 (64%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           + PVEF  AI++VNKIK RF     +YK FL+IL  Y++E+K I +VY +V  LF   PD
Sbjct: 265 RGPVEFNHAISYVNKIKNRFSDSPEIYKQFLEILQTYQRESKPIQDVYTQVTHLFGAAPD 324

Query: 186 LLEEFTHFLPDSSGAASIHYVPSGRNS 212
           LLE+F  FLP+S+  A     PS R S
Sbjct: 325 LLEDFKQFLPESAAQAKAQATPSTRQS 351



 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 42/68 (61%), Positives = 49/68 (72%)

Query: 47  DALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNT 106
           DAL+YL  VK  F ++ E Y+ FL++MKDFK+Q IDT GVI RV  LF GH  LI GFNT
Sbjct: 7   DALSYLDQVKVRFVEQPEVYNRFLDIMKDFKSQAIDTPGVIQRVSTLFNGHPALIQGFNT 66

Query: 107 FLPKGYEI 114
           FLP GY I
Sbjct: 67  FLPPGYRI 74



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 69/330 (20%), Positives = 121/330 (36%), Gaps = 54/330 (16%)

Query: 132 EEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFT 191
           ++A+++++++K RF     VY  FLDI+  ++ +      V Q V  LF  HP L++ F 
Sbjct: 6   QDALSYLDQVKVRFVEQPEVYNRFLDIMKDFKSQAIDTPGVIQRVSTLFNGHPALIQGFN 65

Query: 192 HFLP---------DSSGAASIHYVPSGRNSILRDRSS---------------AMPTARQV 227
            FLP         D +  A     PSG N+I     S               + P +R  
Sbjct: 66  TFLPPGYRIECGTDDNPDAIRVTTPSGTNTISMQSGSRPSLGAPEGAGPAVQSAPASRPE 125

Query: 228 HVDKKERAM----------ASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERRDD 277
           + D+   A             H         P   H    +   + Q R    +  + D 
Sbjct: 126 YYDQPRSAWQHGHAQQQAQPGHPSGAPGSYSPKSQHMAAGMYGQQQQSRHNPSQDTQYDY 185

Query: 278 H---------------RRERERDDRDFENDVNRDFSMQRFPHKRKSARKIEDSTAEPLHQ 322
                            ++ +R     +N V+      R P  +          ++P+  
Sbjct: 186 QAQHEQQASSEAASMVHQQEQRGVSQLQNAVSVASGASRQPMMQLPPGSHTPGPSQPMGS 245

Query: 323 GGEGDENFGMHPVSSSYDDKNAMKSMFSQELSFCEKVKDKLRDD---YQEFLRCLHLYTK 379
              G    G+ P       +  ++  F+  +S+  K+K++  D    Y++FL  L  Y +
Sbjct: 246 MAAGMGPSGVMPGQVDASKRGPVE--FNHAISYVNKIKNRFSDSPEIYKQFLEILQTYQR 303

Query: 380 EIITRSELQSLVGDLLGRYPDLMDGFNGFL 409
           E     ++ + V  L G  PDL++ F  FL
Sbjct: 304 ESKPIQDVYTQVTHLFGAAPDLLEDFKQFL 333



 Score = 46.2 bits (108), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 35/65 (53%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFN 105
           N A++Y+  +K+ F D  E Y  FLE+++ ++ +      V  +V  LF    DL+  F 
Sbjct: 271 NHAISYVNKIKNRFSDSPEIYKQFLEILQTYQRESKPIQDVYTQVTHLFGAAPDLLEDFK 330

Query: 106 TFLPK 110
            FLP+
Sbjct: 331 QFLPE 335


>gi|326485570|gb|EGE09580.1| transcriptional repressor Sin3p [Trichophyton equinum CBS 127.97]
          Length = 1645

 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 104/335 (31%), Positives = 156/335 (46%), Gaps = 44/335 (13%)

Query: 500  LDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMRKNQ 558
            ++LS+C    PSYRLLPK     + S R EL   VLND W S  T  SED  F   RKNQ
Sbjct: 844  VNLSHCRALGPSYRLLPKRERQKACSGRDELCRSVLNDDWASHPTWASEDSGFVAHRKNQ 903

Query: 559  YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDG-------PIRVEDHF 611
            YE++L R E+DR + D  +E+   T + +E L+++I   ++ +D        P  +    
Sbjct: 904  YEDALHRIEEDRHDYDHHIEACIRTIQLLEPLVQQI---SLMSDSDRSSFKLPPGLGGQS 960

Query: 612  TALNLRCIERLYG-DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEI 670
              +  R I+++Y  + G  V++ +     L LP++L RLKQK EEW   + +++KVW E 
Sbjct: 961  ETIYRRVIKKIYDREPGQRVIEEMFNRPCLVLPIVLARLKQKCEEWKATQREWDKVWREQ 1020

Query: 671  YSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVP 730
              K + +SLDH++   K  D K   +K +  EI+   E+ R            NRR    
Sbjct: 1021 MQKGFWRSLDHQAIIMKGNDKKVFLSKHIQHEIQTKFEEGR------------NRRRTGV 1068

Query: 731  H-----LEFEYSDPDIHEDLYQL----IKYSCGEMCTTEQLDKVMKIWTTFLEPMLGVPS 781
            H     ++F + D ++  D   L    + +S        Q  +VM     F+    G+  
Sbjct: 1069 HVSNYQMDFAFEDSEVVLDATHLLLCYLDHSSAGFGADPQ--RVMAFIKDFIPVFFGI-- 1124

Query: 782  RPQGAEDTEDVVKAKSHTVKSRAASV-GDSDGSPD 815
                  D E      S    S +AS   D D SPD
Sbjct: 1125 ------DREAFKNYLSEVYDSSSASEDADDDSSPD 1153



 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 49/90 (54%), Positives = 58/90 (64%), Gaps = 1/90 (1%)

Query: 26  SGQTQVVGGGGG-GGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTA 84
           SG +QV G        Q+   NDAL+YL  VK  F ++ E Y+ FL++MKDFK+Q IDT 
Sbjct: 266 SGPSQVPGSVAALAQGQQPILNDALSYLDQVKVRFVEQPEVYNRFLDIMKDFKSQAIDTP 325

Query: 85  GVIARVKELFKGHRDLILGFNTFLPKGYEI 114
           GVI RV  LF GH  LI GFNTFLP GY I
Sbjct: 326 GVIQRVSTLFNGHPALIQGFNTFLPPGYRI 355



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/87 (49%), Positives = 56/87 (64%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           + PVEF  AI++VNKIK RF     +YK FL+IL  Y++E+K I +VY +V  LF   PD
Sbjct: 546 RGPVEFNHAISYVNKIKNRFSDSPEIYKQFLEILQTYQRESKPIQDVYTQVTHLFGAAPD 605

Query: 186 LLEEFTHFLPDSSGAASIHYVPSGRNS 212
           LLE+F  FLP+S+  A     PS R S
Sbjct: 606 LLEDFKQFLPESAAQAKAQATPSTRQS 632



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 73/355 (20%), Positives = 132/355 (37%), Gaps = 57/355 (16%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           ++P+   +A+++++++K RF     VY  FLDI+  ++ +      V Q V  LF  HP 
Sbjct: 282 QQPI-LNDALSYLDQVKVRFVEQPEVYNRFLDIMKDFKSQAIDTPGVIQRVSTLFNGHPA 340

Query: 186 LLEEFTHFLP----------DSSGAASIHYVPSGRNSILRDRSS---------------A 220
           L++ F  FLP          D+  A  +   PSG N+I     S               +
Sbjct: 341 LIQGFNTFLPPGYRIECGTDDNPDAIRV-TTPSGTNTISMQSGSRPPLGGPEGAGPAVQS 399

Query: 221 MPTARQVHVDKKERAM----------ASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEK 270
            P +R  + D+   A             H         P   H    +   + Q R    
Sbjct: 400 APASRPEYYDQPRSAWQHGHAQQQAQPGHPSGAPGSYSPKSQHMAAGMYGQQQQTRHNPS 459

Query: 271 ERERRDDH---------------RRERERDDRDFENDVNRDFSMQRFPHKRKSARKIEDS 315
           +  + D                  ++ +R     +N V+   S  R P  +         
Sbjct: 460 QDTQYDYQAQHEQQASSEAASMVHQQEQRGVSQLQNAVSVASSASRQPMMQLPPGSHTPG 519

Query: 316 TAEPLHQGGEGDENFGMHPVSSSYDDKNAMKSMFSQELSFCEKVKDKLRDD---YQEFLR 372
            ++P+     G    G+ P       +  ++  F+  +S+  K+K++  D    Y++FL 
Sbjct: 520 PSQPMGSMAAGMGPSGVMPGQVDASKRGPVE--FNHAISYVNKIKNRFSDSPEIYKQFLE 577

Query: 373 CLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLARCEKSEELLADVMSKKS 427
            L  Y +E     ++ + V  L G  PDL++ F  FL       +  A   +++S
Sbjct: 578 ILQTYQRESKPIQDVYTQVTHLFGAAPDLLEDFKQFLPESAAQAKAQATPSTRQS 632



 Score = 46.6 bits (109), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 35/65 (53%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFN 105
           N A++Y+  +K+ F D  E Y  FLE+++ ++ +      V  +V  LF    DL+  F 
Sbjct: 552 NHAISYVNKIKNRFSDSPEIYKQFLEILQTYQRESKPIQDVYTQVTHLFGAAPDLLEDFK 611

Query: 106 TFLPK 110
            FLP+
Sbjct: 612 QFLPE 616


>gi|225679348|gb|EEH17632.1| paired amphipathic helix protein Sin3b [Paracoccidioides brasiliensis
            Pb03]
          Length = 1592

 Score =  127 bits (318), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 75/218 (34%), Positives = 117/218 (53%), Gaps = 6/218 (2%)

Query: 500  LDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMRKNQ 558
            ++LS+C    PSYRLLPK       S R ++   VLND W S  T  SED  F   RKNQ
Sbjct: 805  VNLSHCRALGPSYRLLPKRERQKPCSGRDDMCQSVLNDEWASHPTWASEDSGFVAHRKNQ 864

Query: 559  YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFTA----L 614
            +E++L R E+DR + D  +E+   T + +E L++++   T       ++          +
Sbjct: 865  FEDTLHRIEEDRHDYDHHIEACIRTIQLMEPLVQQMATMTDAERASFKLPPGLGGQSETI 924

Query: 615  NLRCIERLYG-DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSK 673
              R I+++Y  + G  V+D +     + +P++L RLKQK EEW  C+ +++KVW E   K
Sbjct: 925  YKRVIKKIYDRERGQKVIDEMFLRPCMVMPIVLARLKQKCEEWKACQREWDKVWREQMQK 984

Query: 674  NYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKR 711
             + +SLDH++   K  D K   AK +  EI+   E+ R
Sbjct: 985  GFWRSLDHQAIIMKGSDKKLFVAKHIQHEIQAKFEELR 1022



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 52/111 (46%), Positives = 65/111 (58%), Gaps = 13/111 (11%)

Query: 22  RGEPSGQTQVVGGGGGGG------------AQKLTTNDALAYLKAVKDIFQDKREKYDDF 69
           +G+PS Q+ V+G  G                Q+   NDAL+YL  VK  F ++ + Y+ F
Sbjct: 211 QGQPSQQS-VLGFNGSAPPQISGSVAALAQGQQPILNDALSYLDQVKVRFVEQPDVYNRF 269

Query: 70  LEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLED 120
           L++MKDFK+Q IDT GVI RV  LF GH  LI GFNTFLP GY I    ED
Sbjct: 270 LDIMKDFKSQAIDTPGVIQRVSTLFNGHPALIQGFNTFLPPGYRIECGTED 320



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 38/72 (52%), Positives = 49/72 (68%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           + PVEF  AI++VNKIK RF      YK FL+IL  Y++E+K I +VY +V  LF   PD
Sbjct: 505 RGPVEFNHAISYVNKIKNRFADSPDTYKQFLEILQTYQRESKPIQDVYAQVTILFNSAPD 564

Query: 186 LLEEFTHFLPDS 197
           LLE+F  FLP+S
Sbjct: 565 LLEDFKQFLPES 576



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 8/97 (8%)

Query: 101 ILGFNTFLPKGYE--ITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDI 158
           +LGFN   P      +    + +QP         +A+++++++K RF     VY  FLDI
Sbjct: 219 VLGFNGSAPPQISGSVAALAQGQQP------ILNDALSYLDQVKVRFVEQPDVYNRFLDI 272

Query: 159 LNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLP 195
           +  ++ +      V Q V  LF  HP L++ F  FLP
Sbjct: 273 MKDFKSQAIDTPGVIQRVSTLFNGHPALIQGFNTFLP 309



 Score = 46.2 bits (108), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 36/65 (55%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFN 105
           N A++Y+  +K+ F D  + Y  FLE+++ ++ +      V A+V  LF    DL+  F 
Sbjct: 511 NHAISYVNKIKNRFADSPDTYKQFLEILQTYQRESKPIQDVYAQVTILFNSAPDLLEDFK 570

Query: 106 TFLPK 110
            FLP+
Sbjct: 571 QFLPE 575


>gi|226291070|gb|EEH46498.1| transcriptional regulatory protein SIN3 [Paracoccidioides
            brasiliensis Pb18]
          Length = 1592

 Score =  127 bits (318), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 75/218 (34%), Positives = 117/218 (53%), Gaps = 6/218 (2%)

Query: 500  LDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMRKNQ 558
            ++LS+C    PSYRLLPK       S R ++   VLND W S  T  SED  F   RKNQ
Sbjct: 805  VNLSHCRALGPSYRLLPKRERQKPCSGRDDMCQSVLNDEWASHPTWASEDSGFVAHRKNQ 864

Query: 559  YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFTA----L 614
            +E++L R E+DR + D  +E+   T + +E L++++   T       ++          +
Sbjct: 865  FEDTLHRIEEDRHDYDHHIEACIRTIQLMEPLVQQMATMTDAERASFKLPPGLGGQSETI 924

Query: 615  NLRCIERLYG-DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSK 673
              R I+++Y  + G  V+D +     + +P++L RLKQK EEW  C+ +++KVW E   K
Sbjct: 925  YKRVIKKIYDRERGQKVIDEMFLRPCMVMPIVLARLKQKCEEWKACQREWDKVWREQMQK 984

Query: 674  NYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKR 711
             + +SLDH++   K  D K   AK +  EI+   E+ R
Sbjct: 985  GFWRSLDHQAIIMKGSDKKLFVAKHIQHEIQAKFEELR 1022



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 52/111 (46%), Positives = 65/111 (58%), Gaps = 13/111 (11%)

Query: 22  RGEPSGQTQVVGGGGGGG------------AQKLTTNDALAYLKAVKDIFQDKREKYDDF 69
           +G+PS Q+ V+G  G                Q+   NDAL+YL  VK  F ++ + Y+ F
Sbjct: 211 QGQPSQQS-VLGFNGSAPPQISGSVAALAQGQQPILNDALSYLDQVKVRFVEQPDVYNRF 269

Query: 70  LEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLED 120
           L++MKDFK+Q IDT GVI RV  LF GH  LI GFNTFLP GY I    ED
Sbjct: 270 LDIMKDFKSQAIDTPGVIQRVSTLFNGHPALIQGFNTFLPPGYRIECGTED 320



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 38/72 (52%), Positives = 49/72 (68%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           + PVEF  AI++VNKIK RF      YK FL+IL  Y++E+K I +VY +V  LF   PD
Sbjct: 505 RGPVEFNHAISYVNKIKNRFADSPDTYKQFLEILQTYQRESKPIQDVYAQVTILFNSAPD 564

Query: 186 LLEEFTHFLPDS 197
           LLE+F  FLP+S
Sbjct: 565 LLEDFKQFLPES 576



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 8/97 (8%)

Query: 101 ILGFNTFLPKGYE--ITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDI 158
           +LGFN   P      +    + +QP         +A+++++++K RF     VY  FLDI
Sbjct: 219 VLGFNGSAPPQISGSVAALAQGQQP------ILNDALSYLDQVKVRFVEQPDVYNRFLDI 272

Query: 159 LNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLP 195
           +  ++ +      V Q V  LF  HP L++ F  FLP
Sbjct: 273 MKDFKSQAIDTPGVIQRVSTLFNGHPALIQGFNTFLP 309



 Score = 46.2 bits (108), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 36/65 (55%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFN 105
           N A++Y+  +K+ F D  + Y  FLE+++ ++ +      V A+V  LF    DL+  F 
Sbjct: 511 NHAISYVNKIKNRFADSPDTYKQFLEILQTYQRESKPIQDVYAQVTILFNSAPDLLEDFK 570

Query: 106 TFLPK 110
            FLP+
Sbjct: 571 QFLPE 575


>gi|315040083|ref|XP_003169419.1| transcriptional regulatory protein SIN3 [Arthroderma gypseum CBS
            118893]
 gi|311346109|gb|EFR05312.1| transcriptional regulatory protein SIN3 [Arthroderma gypseum CBS
            118893]
          Length = 1597

 Score =  126 bits (316), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 79/221 (35%), Positives = 120/221 (54%), Gaps = 12/221 (5%)

Query: 500  LDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMRKNQ 558
            ++LS+C    PSYRLLPK     + S R EL   VLND W S  T  SED  F   RKNQ
Sbjct: 881  VNLSHCRALGPSYRLLPKRERQKACSGRDELCKSVLNDDWASHPTWASEDSGFVAHRKNQ 940

Query: 559  YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDG-------PIRVEDHF 611
            YE++L R E+DR + D  +E+   T + +E L+++I   ++ +D        P  +    
Sbjct: 941  YEDALHRIEEDRHDYDHHIEACIRTIQLLEPLVQQI---SLMSDSDRSSFKLPPGLGGQS 997

Query: 612  TALNLRCIERLYG-DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEI 670
              +  R I+++Y  + G  V++ +     L LP++L RLKQK EEW   + +++KVW E 
Sbjct: 998  ETIYRRVIKKIYDREPGQRVIEEMFTRPCLVLPIVLARLKQKCEEWKATQREWDKVWREQ 1057

Query: 671  YSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKR 711
              K + +SLDH++   K  D K   +K +  EI+   E+ R
Sbjct: 1058 MQKGFWRSLDHQAIIMKGNDKKVFLSKHIQHEIQTKFEEGR 1098



 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 43/71 (60%), Positives = 50/71 (70%)

Query: 44  TTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILG 103
           T  DAL+YL  VK  F ++ E Y+ FL++MKDFK+Q IDT GVI RV  LF GH  LI G
Sbjct: 343 TKQDALSYLDQVKVRFVEQPEVYNRFLDIMKDFKSQAIDTPGVIQRVSTLFNGHPALIQG 402

Query: 104 FNTFLPKGYEI 114
           FNTFLP GY I
Sbjct: 403 FNTFLPPGYRI 413



 Score = 69.7 bits (169), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 32/71 (45%), Positives = 43/71 (60%)

Query: 142 KTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAA 201
           + RF     +YK FL+IL  Y++E+K I +VY +V  LF   PDLLE+F  FLP+S+  A
Sbjct: 599 QNRFSDSPEIYKQFLEILQTYQRESKPIQDVYTQVTHLFGAAPDLLEDFKQFLPESAAQA 658

Query: 202 SIHYVPSGRNS 212
                PS R S
Sbjct: 659 KAQATPSARQS 669



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 69/335 (20%), Positives = 126/335 (37%), Gaps = 49/335 (14%)

Query: 132 EEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFT 191
           ++A+++++++K RF     VY  FLDI+  ++ +      V Q V  LF  HP L++ F 
Sbjct: 345 QDALSYLDQVKVRFVEQPEVYNRFLDIMKDFKSQAIDTPGVIQRVSTLFNGHPALIQGFN 404

Query: 192 HFLP----------DSSGAASIHYVPSGRNSILRDRSS---------------AMPTARQ 226
            FLP          D+  A  +   PSG N+I     +               + P +R 
Sbjct: 405 TFLPPGYRIECGTDDNPDAIRV-TTPSGTNTISMQSGARPPLGAPEGTGPAVPSAPASRP 463

Query: 227 VHVDK----------KERAMASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERRD 276
            + D+          +++A   H         P   H    +   + Q R    + + + 
Sbjct: 464 EYYDQPRSAWQHGHSQQQAQPGHPAGAPGSYSPKSQHMTAGMYGQQQQSRHNPSQ-DTQY 522

Query: 277 DHRRERERDDRDFENDVNRDFSMQRFPHKRKSARKIEDSTAEPLHQGGEGDENFGMHPVS 336
           D++ + E+     E         QR   + ++A  +  S            +   + P S
Sbjct: 523 DYQAQHEQQQASNEAASMVHQQEQRGVSQLQNAVSVASSAGR--------QQIMQLPPGS 574

Query: 337 SSYDDKNAMKSMF-SQELSFCEKVKDKLRDD---YQEFLRCLHLYTKEIITRSELQSLVG 392
            +      M SM      S     +++  D    Y++FL  L  Y +E     ++ + V 
Sbjct: 575 HTPGPTQPMGSMAGGMGPSGVMPGQNRFSDSPEIYKQFLEILQTYQRESKPIQDVYTQVT 634

Query: 393 DLLGRYPDLMDGFNGFLARCEKSEELLADVMSKKS 427
            L G  PDL++ F  FL       +  A   +++S
Sbjct: 635 HLFGAAPDLLEDFKQFLPESAAQAKAQATPSARQS 669


>gi|327298021|ref|XP_003233704.1| transcriptional repressor Sin3p [Trichophyton rubrum CBS 118892]
 gi|326463882|gb|EGD89335.1| transcriptional repressor Sin3p [Trichophyton rubrum CBS 118892]
          Length = 1649

 Score =  125 bits (315), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 87/264 (32%), Positives = 134/264 (50%), Gaps = 29/264 (10%)

Query: 500  LDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMRKNQ 558
            ++LS+C    PSYRLLPK     + S R EL   VLND W S  T  SED  F   RKNQ
Sbjct: 845  VNLSHCRALGPSYRLLPKRERQKACSGRDELCRSVLNDDWASHPTWASEDSGFVAHRKNQ 904

Query: 559  YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDG-------PIRVEDHF 611
            YE++L R E+DR + D  +E+   T + +E L+++I   ++ +D        P  +    
Sbjct: 905  YEDALHRIEEDRHDYDHHIEACIRTIQLLEPLVQQI---SLMSDSDRSSFKLPPGLGGQS 961

Query: 612  TALNLRCIERLYG-DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEI 670
              +  R I+++Y  + G  V++ +     L LP++L RLKQK EEW   + +++KVW E 
Sbjct: 962  ETIYRRVIKKIYDREPGQRVIEEMFNRPCLVLPIVLARLKQKCEEWKATQREWDKVWREQ 1021

Query: 671  YSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVP 730
              K + +SLDH++   K  D K   +K +  EI+   E+ R            NRR    
Sbjct: 1022 MQKGFWRSLDHQAIIMKGNDKKVFLSKHIQHEIQTKFEEGR------------NRRRTGV 1069

Query: 731  H-----LEFEYSDPDIHEDLYQLI 749
            H     ++F + D ++  D   L+
Sbjct: 1070 HVSNYQMDFAFEDSEVVLDATHLL 1093



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 49/90 (54%), Positives = 58/90 (64%), Gaps = 1/90 (1%)

Query: 26  SGQTQVVGGGGG-GGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTA 84
           SG +QV G        Q+   NDAL+YL  VK  F ++ E Y+ FL++MKDFK+Q IDT 
Sbjct: 267 SGPSQVPGSVAALAQGQQPILNDALSYLDQVKVRFVEQPEVYNRFLDIMKDFKSQAIDTP 326

Query: 85  GVIARVKELFKGHRDLILGFNTFLPKGYEI 114
           GVI RV  LF GH  LI GFNTFLP GY I
Sbjct: 327 GVIQRVSTLFNGHPALIQGFNTFLPPGYRI 356



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/87 (49%), Positives = 56/87 (64%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           + PVEF  AI++VNKIK RF     +YK FL+IL  Y++E+K I +VY +V  LF   PD
Sbjct: 547 RGPVEFNHAISYVNKIKNRFSDSPEIYKQFLEILQTYQRESKPIQDVYTQVTHLFGAAPD 606

Query: 186 LLEEFTHFLPDSSGAASIHYVPSGRNS 212
           LLE+F  FLP+S+  A     PS R S
Sbjct: 607 LLEDFKQFLPESAAQAKAQATPSTRQS 633



 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 74/358 (20%), Positives = 130/358 (36%), Gaps = 63/358 (17%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           ++P+   +A+++++++K RF     VY  FLDI+  ++ +      V Q V  LF  HP 
Sbjct: 283 QQPI-LNDALSYLDQVKVRFVEQPEVYNRFLDIMKDFKSQAIDTPGVIQRVSTLFNGHPA 341

Query: 186 LLEEFTHFLP----------DSSGAASIHYVPSGRNSILRDRSS---------------A 220
           L++ F  FLP          D+  A  +   PSG N+I     S               +
Sbjct: 342 LIQGFNTFLPPGYRIECGTDDNPDAIRV-TTPSGTNTISMQSGSRPSLGAPEGAGPTVQS 400

Query: 221 MPTARQVHVDKKERAM----------ASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEK 270
            P +R  + D+   A             H         P   H    +   + Q R    
Sbjct: 401 APASRPEYYDQPRSAWQHGHAQQQAQPGHPSGAPGSYSPKSQHMAAGMYGQQQQSRHNPS 460

Query: 271 ERERRDDH---------------RRERERDDRDFENDVNRDFSMQRFPHKRKSARKIEDS 315
           +  + D                  ++ +R     +N V+      R P  +         
Sbjct: 461 QDTQYDYQAQHEQQASSEATSMVHQQEQRGVSQLQNAVSVASGASRQPMMQLPPGSHTPG 520

Query: 316 TAEPLHQGGEGDENFGMHP---VSSSYDDKNAMKSMFSQELSFCEKVKDKLRDD---YQE 369
            ++P+     G    GM P   +    D        F+  +S+  K+K++  D    Y++
Sbjct: 521 PSQPI-----GSMATGMGPSGVIPGQVDASKRGPVEFNHAISYVNKIKNRFSDSPEIYKQ 575

Query: 370 FLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLARCEKSEELLADVMSKKS 427
           FL  L  Y +E     ++ + V  L G  PDL++ F  FL       +  A   +++S
Sbjct: 576 FLEILQTYQRESKPIQDVYTQVTHLFGAAPDLLEDFKQFLPESAAQAKAQATPSTRQS 633



 Score = 46.6 bits (109), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 35/65 (53%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFN 105
           N A++Y+  +K+ F D  E Y  FLE+++ ++ +      V  +V  LF    DL+  F 
Sbjct: 553 NHAISYVNKIKNRFSDSPEIYKQFLEILQTYQRESKPIQDVYTQVTHLFGAAPDLLEDFK 612

Query: 106 TFLPK 110
            FLP+
Sbjct: 613 QFLPE 617


>gi|389637276|ref|XP_003716276.1| hypothetical protein MGG_13498 [Magnaporthe oryzae 70-15]
 gi|351642095|gb|EHA49957.1| hypothetical protein MGG_13498 [Magnaporthe oryzae 70-15]
          Length = 1476

 Score =  125 bits (315), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 88/297 (29%), Positives = 148/297 (49%), Gaps = 25/297 (8%)

Query: 496 PIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHM 554
           P   + LSNC    PSYRLLPK   +   S R EL   VLND W S  T  SED  F   
Sbjct: 712 PTGRVSLSNCRGYGPSYRLLPKRERLKPCSGRDELCNSVLNDEWASHPTWASEDSGFVAH 771

Query: 555 RKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDG--------PIR 606
           RKN +EE L R E++R + D  +E+     ++  +LLE I    +  +         P  
Sbjct: 772 RKNAFEEGLHRIEEERHDYDFFIEA----NQKCIQLLEPIAQQMLTLNPADRQNFRMPSG 827

Query: 607 VEDHFTALNLRCIERLYG-DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNK 665
           +    T++  R ++++YG D G +V++ + ++    +P+++ RLKQK EEW   + ++ K
Sbjct: 828 LGGQSTSIYKRVLKKVYGADKGAEVVNDMFQHPFTVVPIVMARLKQKDEEWRFSQREWEK 887

Query: 666 VWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNR 725
           VW       + KSLDH+    K  D ++L AK L   IK   E+++++           +
Sbjct: 888 VWQSQTKAMHLKSLDHQGIQVKGNDKRTLSAKHLVDLIKTKHEEQKRQR------VNKGK 941

Query: 726 RSIVPHLEFEYSDPDIHEDLYQ---LIKYSCGEMCTTEQLDKVMKIWTTFLEPMLGV 779
              V HL + ++D  +  DL +   L   + G+  ++E+ D++++ +   +    G+
Sbjct: 942 APRVQHL-WSFTDQGVLLDLLRFMVLYAMNSGQHGSSEK-DRILEFFENSVPQFFGI 996



 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 80/288 (27%), Positives = 131/288 (45%), Gaps = 36/288 (12%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           + PVEF  AI++VNKIK RFQ    +YK FL+IL  Y++E K I EVY +V  LF   PD
Sbjct: 441 RGPVEFNHAISYVNKIKNRFQDKPEIYKQFLEILQTYQREQKPIQEVYAQVTTLFHTAPD 500

Query: 186 LLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQVHVDKKERAMASHADRDLS 245
           LLE+F  FLP+S+            +  L +  + MP              A++  R+  
Sbjct: 501 LLEDFKQFLPESAAQTRTFGQRPAEDGGLLNHINQMP-------------QATNPARE-G 546

Query: 246 VDRPDPDHDRVLLKSDKDQRRRGEKERERRDDHRRERERDDRDFENDVNRDFSMQRFPHK 305
              P   +  V + + KD ++R     E+      + ++        +N           
Sbjct: 547 PKMPPVGNFAVPVSASKDNKKR--PRIEKPPAATPQAQQSPAVGSASIN----------- 593

Query: 306 RKSARKIEDSTAEPLHQGGEGDENFGMHPVSSSYDDKNAMKSMFSQE--LSFCEKVKDKL 363
             SA K   +T +P   G   + +  + P+       +A  S+ SQE  L++ E++K  +
Sbjct: 594 --SANKRTKTTHKPSGDGPSIEPS--LTPIVPEPMSPSASTSV-SQEKALNYLERIKKHI 648

Query: 364 --RDDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFL 409
             R    EF + ++LYT+ +I ++ L      ++G   +LM  F  F+
Sbjct: 649 GNRTTLHEFFKLINLYTQGLIDKNVLVQKAQMIIGANVELMTWFKNFV 696



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 45/82 (54%), Positives = 59/82 (71%), Gaps = 1/82 (1%)

Query: 39  GAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHR 98
           G+Q +  NDAL+YL  VK  F ++ + Y+ FL++MKDFK+Q IDT GVI RV +LF GH 
Sbjct: 210 GSQPIL-NDALSYLDQVKAQFHEQPDVYNRFLDIMKDFKSQTIDTPGVINRVSDLFAGHP 268

Query: 99  DLILGFNTFLPKGYEITLPLED 120
           +LI GFNTFLP GY I   L++
Sbjct: 269 NLIQGFNTFLPPGYRIECGLDN 290



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 61/307 (19%), Positives = 114/307 (37%), Gaps = 40/307 (13%)

Query: 131 FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEF 190
             +A+++++++K +F     VY  FLDI+  ++ +      V   V  LF  HP+L++ F
Sbjct: 215 LNDALSYLDQVKAQFHEQPDVYNRFLDIMKDFKSQTIDTPGVINRVSDLFAGHPNLIQGF 274

Query: 191 THFLP------------------DSSGAASIHYVPSGRNSILRDRSSAMPTARQV-HVDK 231
             FLP                   +   +++H + +GR ++     SA P  +   ++  
Sbjct: 275 NTFLPPGYRIECGLDNNPNSIRVTTPSGSTVHSIGAGRGALPPVDGSAGPPGQNAQYLGP 334

Query: 232 KERAMASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERRDDHRRERERDDRDFEN 291
             R          S++ P+                 G    +        ++R     + 
Sbjct: 335 NSRPGNWQQSVQHSIESPEAQFSAPAQPGPGPFGPGGAPGAQFDGHSPAHQQRVVSSGQQ 394

Query: 292 DVNRDFSMQRFPHKRKS---ARKIEDST--AEPLHQGGEGDENFGMH-PVSSSYDDKNAM 345
                  +   P        AR ++  T  A+P    G   +  G   PV          
Sbjct: 395 PAGPGSGLVAGPGSAMPGPMARNVQTPTPGAQPASLNGSSSQQGGQRGPVE--------- 445

Query: 346 KSMFSQELSFCEKVKDKLRDD---YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLM 402
              F+  +S+  K+K++ +D    Y++FL  L  Y +E     E+ + V  L    PDL+
Sbjct: 446 ---FNHAISYVNKIKNRFQDKPEIYKQFLEILQTYQREQKPIQEVYAQVTTLFHTAPDLL 502

Query: 403 DGFNGFL 409
           + F  FL
Sbjct: 503 EDFKQFL 509



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 6/105 (5%)

Query: 37  GGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKG 96
           GG    +  N A++Y+  +K+ FQDK E Y  FLE+++ ++ ++     V A+V  LF  
Sbjct: 438 GGQRGPVEFNHAISYVNKIKNRFQDKPEIYKQFLEILQTYQREQKPIQEVYAQVTTLFHT 497

Query: 97  HRDLILGFNTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKI 141
             DL+  F  FLP+    T          ++P E    +N +N++
Sbjct: 498 APDLLEDFKQFLPESAAQTRTFG------QRPAEDGGLLNHINQM 536


>gi|302695405|ref|XP_003037381.1| hypothetical protein SCHCODRAFT_73339 [Schizophyllum commune H4-8]
 gi|300111078|gb|EFJ02479.1| hypothetical protein SCHCODRAFT_73339 [Schizophyllum commune H4-8]
          Length = 1170

 Score =  125 bits (315), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 84/286 (29%), Positives = 156/286 (54%), Gaps = 26/286 (9%)

Query: 510 PSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMRKNQYEESLFRCED 568
           PSYR LP + +  + S R E    +LND WVS  T  SE+  F   +KN +EE+L + E+
Sbjct: 450 PSYRRLPDSEIYLACSGRDEHCRSLLNDEWVSHPTWASEEAGFVAHKKNSFEEALHKSEE 509

Query: 569 DRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TALNLRCIERLYG 624
           +R E  + +E++  T   ++ L  +I + T +     +++  F     ++  R I+++YG
Sbjct: 510 ERHEYHVHIEALRRTIAVLDPLNARIEDMTHEERANFKLDADFGGPSKSIYQRIIKKVYG 569

Query: 625 -DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRS 683
            D G +++  ++++ ++A+PV+L RLKQK EEW R + ++ + W  + S N+++S+DH  
Sbjct: 570 RDSGQEILVSMQESPAVAIPVVLARLKQKDEEWRRLQREYARTWKAVDSANFYRSIDHMG 629

Query: 684 FYFKQQDSKSLGAK--------ALSAEIKEISEK--KRKEDDVLLAIAAGNRRSIVPHLE 733
             FK  D K++  K        A  A++K++ E+  K KE     A+   +R SI   LE
Sbjct: 630 PAFKNNDKKNITQKHFVGEIIDARKAQVKQLEEQIGKGKEK----AVPVCSRGSIGVQLE 685

Query: 734 FEYSDPDIHED----LYQLIKYSCGEMCTTEQ--LDKVMKIWTTFL 773
           +++ D  + +D    +Y  + +S G+    E+  ++K ++ +   L
Sbjct: 686 YQFEDTAVLQDSLKLVYSFLDHSPGQYNLHERRAIEKFLRAFIPVL 731



 Score = 72.8 bits (177), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/72 (51%), Positives = 48/72 (66%), Gaps = 2/72 (2%)

Query: 125 PKKPVE-FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDH 183
           P+ P E F+ AI+F+NKIK R++GD H YK FLD+L   +K+     EV Q+V  LF D 
Sbjct: 161 PQMPKEEFQRAIDFLNKIKMRYEGDHH-YKLFLDVLQACQKQRYMQQEVLQQVHDLFHDA 219

Query: 184 PDLLEEFTHFLP 195
           P+LL EF  FLP
Sbjct: 220 PELLHEFNDFLP 231



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 30/42 (71%), Positives = 32/42 (76%)

Query: 73  MKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEI 114
           MKDFK+  IDT GVI RV ELF GH +LI GFNTFLP GY I
Sbjct: 1   MKDFKSSVIDTPGVIQRVSELFYGHPNLITGFNTFLPYGYRI 42


>gi|440467337|gb|ELQ36566.1| transcriptional regulatory protein SIN3 [Magnaporthe oryzae Y34]
 gi|440479260|gb|ELQ60041.1| transcriptional regulatory protein SIN3 [Magnaporthe oryzae P131]
          Length = 1971

 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 88/297 (29%), Positives = 148/297 (49%), Gaps = 25/297 (8%)

Query: 496  PIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHM 554
            P   + LSNC    PSYRLLPK   +   S R EL   VLND W S  T  SED  F   
Sbjct: 1207 PTGRVSLSNCRGYGPSYRLLPKRERLKPCSGRDELCNSVLNDEWASHPTWASEDSGFVAH 1266

Query: 555  RKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDG--------PIR 606
            RKN +EE L R E++R + D  +E+     ++  +LLE I    +  +         P  
Sbjct: 1267 RKNAFEEGLHRIEEERHDYDFFIEA----NQKCIQLLEPIAQQMLTLNPADRQNFRMPSG 1322

Query: 607  VEDHFTALNLRCIERLYG-DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNK 665
            +    T++  R ++++YG D G +V++ + ++    +P+++ RLKQK EEW   + ++ K
Sbjct: 1323 LGGQSTSIYKRVLKKVYGADKGAEVVNDMFQHPFTVVPIVMARLKQKDEEWRFSQREWEK 1382

Query: 666  VWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNR 725
            VW       + KSLDH+    K  D ++L AK L   IK   E+++++           +
Sbjct: 1383 VWQSQTKAMHLKSLDHQGIQVKGNDKRTLSAKHLVDLIKTKHEEQKRQR------VNKGK 1436

Query: 726  RSIVPHLEFEYSDPDIHEDLYQ---LIKYSCGEMCTTEQLDKVMKIWTTFLEPMLGV 779
               V HL + ++D  +  DL +   L   + G+  ++E+ D++++ +   +    G+
Sbjct: 1437 APRVQHL-WSFTDQGVLLDLLRFMVLYAMNSGQHGSSEK-DRILEFFENSVPQFFGI 1491



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 83/298 (27%), Positives = 136/298 (45%), Gaps = 37/298 (12%)

Query: 126  KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
            + PVEF  AI++VNKIK RFQ    +YK FL+IL  Y++E K I EVY +V  LF   PD
Sbjct: 936  RGPVEFNHAISYVNKIKNRFQDKPEIYKQFLEILQTYQREQKPIQEVYAQVTTLFHTAPD 995

Query: 186  LLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQVHVDKKERAMASHADRDLS 245
            LLE+F  FLP+S+            +  L +  + MP              A++  R+  
Sbjct: 996  LLEDFKQFLPESAAQTRTFGQRPAEDGGLLNHINQMP-------------QATNPARE-G 1041

Query: 246  VDRPDPDHDRVLLKSDKDQRRRGEKERERRDDHRRERERDDRDFENDVNRDFSMQRFPHK 305
               P   +  V + + KD ++R     E+      + ++        +N           
Sbjct: 1042 PKMPPVGNFAVPVSASKDNKKR--PRIEKPPAATPQAQQSPAVGSASIN----------- 1088

Query: 306  RKSARKIEDSTAEPLHQGGEGDENFGMHPVSSSYDDKNAMKSMFSQE--LSFCEKVKDKL 363
              SA K   +T +P   G   + +  + P+       +A  S+ SQE  L++ E++K  +
Sbjct: 1089 --SANKRTKTTHKPSGDGPSIEPS--LTPIVPEPMSPSASTSV-SQEKALNYLERIKKHI 1143

Query: 364  --RDDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLARCEKSEELL 419
              R    EF + ++LYT+ +I ++ L      ++G   +LM  F  F+ R    +EL+
Sbjct: 1144 GNRTTLHEFFKLINLYTQGLIDKNVLVQKAQMIIGANVELMTWFKNFV-RYTGDDELV 1200



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 45/82 (54%), Positives = 59/82 (71%), Gaps = 1/82 (1%)

Query: 39  GAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHR 98
           G+Q +  NDAL+YL  VK  F ++ + Y+ FL++MKDFK+Q IDT GVI RV +LF GH 
Sbjct: 705 GSQPIL-NDALSYLDQVKAQFHEQPDVYNRFLDIMKDFKSQTIDTPGVINRVSDLFAGHP 763

Query: 99  DLILGFNTFLPKGYEITLPLED 120
           +LI GFNTFLP GY I   L++
Sbjct: 764 NLIQGFNTFLPPGYRIECGLDN 785



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 61/307 (19%), Positives = 114/307 (37%), Gaps = 40/307 (13%)

Query: 131  FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEF 190
              +A+++++++K +F     VY  FLDI+  ++ +      V   V  LF  HP+L++ F
Sbjct: 710  LNDALSYLDQVKAQFHEQPDVYNRFLDIMKDFKSQTIDTPGVINRVSDLFAGHPNLIQGF 769

Query: 191  THFLP------------------DSSGAASIHYVPSGRNSILRDRSSAMPTARQV-HVDK 231
              FLP                   +   +++H + +GR ++     SA P  +   ++  
Sbjct: 770  NTFLPPGYRIECGLDNNPNSIRVTTPSGSTVHSIGAGRGALPPVDGSAGPPGQNAQYLGP 829

Query: 232  KERAMASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERRDDHRRERERDDRDFEN 291
              R          S++ P+                 G    +        ++R     + 
Sbjct: 830  NSRPGNWQQSVQHSIESPEAQFSAPAQPGPGPFGPGGAPGAQFDGHSPAHQQRVVSSGQQ 889

Query: 292  DVNRDFSMQRFPHKRKS---ARKIEDST--AEPLHQGGEGDENFGMH-PVSSSYDDKNAM 345
                   +   P        AR ++  T  A+P    G   +  G   PV          
Sbjct: 890  PAGPGSGLVAGPGSAMPGPMARNVQTPTPGAQPASLNGSSSQQGGQRGPVE--------- 940

Query: 346  KSMFSQELSFCEKVKDKLRDD---YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLM 402
               F+  +S+  K+K++ +D    Y++FL  L  Y +E     E+ + V  L    PDL+
Sbjct: 941  ---FNHAISYVNKIKNRFQDKPEIYKQFLEILQTYQREQKPIQEVYAQVTTLFHTAPDLL 997

Query: 403  DGFNGFL 409
            + F  FL
Sbjct: 998  EDFKQFL 1004



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 42/74 (56%)

Query: 37   GGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKG 96
            GG    +  N A++Y+  +K+ FQDK E Y  FLE+++ ++ ++     V A+V  LF  
Sbjct: 933  GGQRGPVEFNHAISYVNKIKNRFQDKPEIYKQFLEILQTYQREQKPIQEVYAQVTTLFHT 992

Query: 97   HRDLILGFNTFLPK 110
              DL+  F  FLP+
Sbjct: 993  APDLLEDFKQFLPE 1006


>gi|327355629|gb|EGE84486.1| transcriptional repressor Sin3p [Ajellomyces dermatitidis ATCC 18188]
          Length = 1636

 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 78/218 (35%), Positives = 116/218 (53%), Gaps = 6/218 (2%)

Query: 500  LDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMRKNQ 558
            ++LS+C    PSYRLLPK       S R ++   VLND W S  T  SED  F   RKNQ
Sbjct: 840  VNLSHCRALGPSYRLLPKRERQKPCSGRDDMCQSVLNDEWASHPTWASEDSGFVAHRKNQ 899

Query: 559  YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNT----IKTDGPIRVEDHFTAL 614
            YE+SL R E+DR + D  +E+   T + +E L+++++  T         P  +      +
Sbjct: 900  YEDSLHRIEEDRHDYDHHIEACIRTIQLMEPLVQQMSTMTEAERANFKLPPGLGGQSETI 959

Query: 615  NLRCIERLYG-DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSK 673
              R I+++Y  + G  V+D +       LP++L RLKQK EEW   + +++KVW E   K
Sbjct: 960  YRRIIKKIYDRERGQRVIDEMFARPCTVLPIVLARLKQKCEEWKASQREWDKVWREQMQK 1019

Query: 674  NYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKR 711
             + +SLDH++   K  D K   AK +  EI+   E+ R
Sbjct: 1020 GFWRSLDHQAIIMKGSDKKLFVAKHIQHEIQAKLEELR 1057



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 45/81 (55%), Positives = 54/81 (66%)

Query: 40  AQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRD 99
            Q+   NDAL+YL  VK  F ++ + Y+ FL++MKDFK+Q IDT GVI RV  LF GH  
Sbjct: 272 GQQPILNDALSYLDQVKVRFVEQPDVYNRFLDIMKDFKSQAIDTPGVIQRVSTLFNGHPT 331

Query: 100 LILGFNTFLPKGYEITLPLED 120
           LI GFNTFLP GY I    ED
Sbjct: 332 LIQGFNTFLPPGYRIECGTED 352



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 37/70 (52%), Positives = 47/70 (67%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           + PVEF  AI++VNKIK RF      YK FL+IL  Y++E+K I +VY +V  LF   PD
Sbjct: 539 RGPVEFNHAISYVNKIKNRFADSPDTYKQFLEILQTYQRESKPIQDVYAQVTLLFNSAPD 598

Query: 186 LLEEFTHFLP 195
           LLE+F  FLP
Sbjct: 599 LLEDFKQFLP 608



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 12/107 (11%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           ++P+   +A+++++++K RF     VY  FLDI+  ++ +      V Q V  LF  HP 
Sbjct: 273 QQPI-LNDALSYLDQVKVRFVEQPDVYNRFLDIMKDFKSQAIDTPGVIQRVSTLFNGHPT 331

Query: 186 LLEEFTHFLP----------DSSGAASIHYVPSGRNSILRDRSSAMP 222
           L++ F  FLP          D+  A  +   PSG N+I    ++  P
Sbjct: 332 LIQGFNTFLPPGYRIECGTEDNPDAIRV-TTPSGTNTISMQSATRPP 377



 Score = 46.2 bits (108), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 21/64 (32%), Positives = 35/64 (54%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFN 105
           N A++Y+  +K+ F D  + Y  FLE+++ ++ +      V A+V  LF    DL+  F 
Sbjct: 545 NHAISYVNKIKNRFADSPDTYKQFLEILQTYQRESKPIQDVYAQVTLLFNSAPDLLEDFK 604

Query: 106 TFLP 109
            FLP
Sbjct: 605 QFLP 608


>gi|261197792|ref|XP_002625298.1| transcriptional repressor Sin3p [Ajellomyces dermatitidis SLH14081]
 gi|239595261|gb|EEQ77842.1| transcriptional repressor Sin3p [Ajellomyces dermatitidis SLH14081]
 gi|239607684|gb|EEQ84671.1| transcriptional repressor Sin3p [Ajellomyces dermatitidis ER-3]
          Length = 1656

 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 78/218 (35%), Positives = 116/218 (53%), Gaps = 6/218 (2%)

Query: 500  LDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMRKNQ 558
            ++LS+C    PSYRLLPK       S R ++   VLND W S  T  SED  F   RKNQ
Sbjct: 860  VNLSHCRALGPSYRLLPKRERQKPCSGRDDMCQSVLNDEWASHPTWASEDSGFVAHRKNQ 919

Query: 559  YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNT----IKTDGPIRVEDHFTAL 614
            YE+SL R E+DR + D  +E+   T + +E L+++++  T         P  +      +
Sbjct: 920  YEDSLHRIEEDRHDYDHHIEACIRTIQLMEPLVQQMSTMTEAERANFKLPPGLGGQSETI 979

Query: 615  NLRCIERLYG-DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSK 673
              R I+++Y  + G  V+D +       LP++L RLKQK EEW   + +++KVW E   K
Sbjct: 980  YRRIIKKIYDRERGQRVIDEMFARPCTVLPIVLARLKQKCEEWKASQREWDKVWREQMQK 1039

Query: 674  NYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKR 711
             + +SLDH++   K  D K   AK +  EI+   E+ R
Sbjct: 1040 GFWRSLDHQAIIMKGSDKKLFVAKHIQHEIQAKLEELR 1077



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 45/81 (55%), Positives = 54/81 (66%)

Query: 40  AQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRD 99
            Q+   NDAL+YL  VK  F ++ + Y+ FL++MKDFK+Q IDT GVI RV  LF GH  
Sbjct: 292 GQQPILNDALSYLDQVKVRFVEQPDVYNRFLDIMKDFKSQAIDTPGVIQRVSTLFNGHPT 351

Query: 100 LILGFNTFLPKGYEITLPLED 120
           LI GFNTFLP GY I    ED
Sbjct: 352 LIQGFNTFLPPGYRIECGTED 372



 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/70 (52%), Positives = 47/70 (67%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           + PVEF  AI++VNKIK RF      YK FL+IL  Y++E+K I +VY +V  LF   PD
Sbjct: 559 RGPVEFNHAISYVNKIKNRFADSPDTYKQFLEILQTYQRESKPIQDVYAQVTLLFNSAPD 618

Query: 186 LLEEFTHFLP 195
           LLE+F  FLP
Sbjct: 619 LLEDFKQFLP 628



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 12/98 (12%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           ++P+   +A+++++++K RF     VY  FLDI+  ++ +      V Q V  LF  HP 
Sbjct: 293 QQPI-LNDALSYLDQVKVRFVEQPDVYNRFLDIMKDFKSQAIDTPGVIQRVSTLFNGHPT 351

Query: 186 LLEEFTHFLP----------DSSGAASIHYVPSGRNSI 213
           L++ F  FLP          D+  A  +   PSG N+I
Sbjct: 352 LIQGFNTFLPPGYRIECGTEDNPDAIRV-TTPSGTNTI 388



 Score = 46.2 bits (108), Expect = 0.096,   Method: Compositional matrix adjust.
 Identities = 21/64 (32%), Positives = 35/64 (54%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFN 105
           N A++Y+  +K+ F D  + Y  FLE+++ ++ +      V A+V  LF    DL+  F 
Sbjct: 565 NHAISYVNKIKNRFADSPDTYKQFLEILQTYQRESKPIQDVYAQVTLLFNSAPDLLEDFK 624

Query: 106 TFLP 109
            FLP
Sbjct: 625 QFLP 628


>gi|302677721|ref|XP_003028543.1| hypothetical protein SCHCODRAFT_78491 [Schizophyllum commune H4-8]
 gi|300102232|gb|EFI93640.1| hypothetical protein SCHCODRAFT_78491 [Schizophyllum commune H4-8]
          Length = 1036

 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 81/250 (32%), Positives = 139/250 (55%), Gaps = 18/250 (7%)

Query: 511 SYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSED-YSFKHMRKNQYEESLFRCED 568
           SYR LP +      S R E+   VLND WVS  T  +ED  +   ++KN YEE+L R E+
Sbjct: 353 SYRKLPASEAQVQCSGRDEMCRSVLNDEWVSHATWTNEDEITSAPLKKNPYEEALHRSEE 412

Query: 569 DRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGP-----IRVEDHF----TALNLRCI 619
           +R E D  ++++     R   +LE INN  ++  GP      +++ +F     +++ R I
Sbjct: 413 ERHEYDFHIDAI----VRTIAMLEPINNKIMQL-GPDDRATFKLKPNFGGSGKSVHHRVI 467

Query: 620 ERLYG-DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKS 678
           +++YG   G++V+ ++++  +LA+PV+L RLKQK+EEW R + ++NKVW E+ ++NY KS
Sbjct: 468 KKIYGRAAGVEVVQMMQEQPALAIPVVLGRLKQKEEEWKRAQREWNKVWREVDARNYAKS 527

Query: 679 LDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSD 738
           LD+++   +  D ++   K L  +I    +++      L+       R     +EF   D
Sbjct: 528 LDYQALAIRAADKRATAQKTLVQQIAAARDEQNSARASLVDPLFARTRP-RHQMEFVIDD 586

Query: 739 PDIHEDLYQL 748
           P + +D  +L
Sbjct: 587 PQVLQDALKL 596



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 64/135 (47%), Gaps = 26/135 (19%)

Query: 73  MKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEI----------TLP----- 117
           MK+FK+  IDT GVI RV +LF GH  LI GFNTFLP GY I          T P     
Sbjct: 1   MKEFKSSLIDTPGVIKRVSQLFHGHPRLIQGFNTFLPIGYRIECTGVSGITVTTPTGHVM 60

Query: 118 ------LEDEQPPPKK--PVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI 169
                   + +P P    P    EA+ ++  IK     +   ++  + +L    ++    
Sbjct: 61  QASDMRWTEHKPAPSHHLPTAAPEAMEYLQSIK---HSNPEKHRQLMGVLRAAGQDTGDR 117

Query: 170 TEVYQEVEALFQDHP 184
            +  ++++A+F+D P
Sbjct: 118 AQYLEDIQAIFKDEP 132


>gi|145550014|ref|XP_001460686.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124428516|emb|CAK93289.1| unnamed protein product [Paramecium tetraurelia]
          Length = 872

 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 72/217 (33%), Positives = 122/217 (56%), Gaps = 19/217 (8%)

Query: 493 LAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFK 552
           L KP+++ D +  +R T SY  +P  Y   + +Q      E+LN  WVSV  GSED SF 
Sbjct: 255 LFKPLKDTDFAQVDRVTRSYVRMPIGYAKANNNQ------EILNHSWVSVPFGSEDQSFL 308

Query: 553 HMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFT 612
            MRKN +EE LF+ ED+RFE D+ ++ +  T   ++E+++         + PI +     
Sbjct: 309 IMRKNTFEEQLFKSEDERFEFDVNIQQIKRTINLLQEIIDG------NKEDPILIAK--- 359

Query: 613 ALNLRCIERLYGDHGLD---VMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNK-VWA 668
            +++R +++LY +   D   V+ + +   + +  +++ R+KQK  E  + R++  K VW 
Sbjct: 360 VIDMRILQQLYRNQTQDQNEVLQIFQSKPTESAKILIKRVKQKLNELIQARNNKAKQVWE 419

Query: 669 EIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKE 705
            +   N+H+SLDHRSFYFK+ D   +  +  + EI+E
Sbjct: 420 NVSLNNFHRSLDHRSFYFKKNDKLVINGQRFAREIEE 456


>gi|296818669|ref|XP_002849671.1| transcriptional repressor Sin3p [Arthroderma otae CBS 113480]
 gi|238840124|gb|EEQ29786.1| transcriptional repressor Sin3p [Arthroderma otae CBS 113480]
          Length = 1651

 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 78/218 (35%), Positives = 120/218 (55%), Gaps = 6/218 (2%)

Query: 500  LDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMRKNQ 558
            ++LS+C    PSYRLLPK     + S R EL   VLND W S  T  SED  F   RKNQ
Sbjct: 845  VNLSHCRALGPSYRLLPKRERQKACSGRDELCKSVLNDDWASHPTWASEDSGFVAHRKNQ 904

Query: 559  YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKIN--NNTIKTDG--PIRVEDHFTAL 614
            YE++L R E+DR + D  +E+   T + +E L+++I+  N++ +     P  +      +
Sbjct: 905  YEDALHRIEEDRHDYDHHIEACIRTIQLLEPLVQQISLMNDSERASFKLPPGLGGQSETI 964

Query: 615  NLRCIERLYG-DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSK 673
              R I+++Y  + G  V++ +     + LP++L RLKQK EEW   + +++KVW E   K
Sbjct: 965  YRRVIKKIYDREPGQRVIEEMFARPCIVLPIVLARLKQKCEEWKATQREWDKVWREQMQK 1024

Query: 674  NYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKR 711
             + +SLDH++   K  D K    K +  EI+   E+ R
Sbjct: 1025 GFWRSLDHQAIIMKGNDKKLFLTKHIQHEIQTKFEEGR 1062



 Score = 97.4 bits (241), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 52/103 (50%), Positives = 64/103 (62%), Gaps = 4/103 (3%)

Query: 13  QIKRPMISSRGEPSGQTQVVGGGGG-GGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLE 71
           Q  +P++S     SG +QV G        Q+   NDAL+YL  VK  F ++ E Y+ FL+
Sbjct: 256 QPSQPILSFN---SGPSQVPGSVAALAQGQQPILNDALSYLDQVKVRFVEQPEVYNRFLD 312

Query: 72  VMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEI 114
           +MKDFK+Q IDT GVI RV  LF GH  LI GFNTFLP GY I
Sbjct: 313 IMKDFKSQAIDTPGVIQRVSTLFNGHPALIQGFNTFLPPGYRI 355



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 83/321 (25%), Positives = 129/321 (40%), Gaps = 61/321 (19%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           + PVEF  AI++VNKIK RF     +YK FL+IL  Y++E+K I +VY +V  LF   PD
Sbjct: 548 RGPVEFNHAISYVNKIKNRFSDSPEIYKQFLEILQTYQRESKPIQDVYTQVTHLFGAAPD 607

Query: 186 LLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQVHVDKKERAMASHADRDLS 245
           LLE+F  FLP+S+  A      S R S             +V +    R   S+    L 
Sbjct: 608 LLEDFKQFLPESAAQAKAQATTSNRQS-----------QEEVPILSNVRGEPSYGTSGL- 655

Query: 246 VDRPDPDHDRVLLKSD-------KDQRRRGEKERERRDDHRRERERDDRDFE------ND 292
              P P   R  +K         KD  +  +K R                        N 
Sbjct: 656 ---PQPQMSRGDVKMPPLGQFNVKDSNKENKKRRGAPGAGAVGGGMPGMPPAVGDMNGNQ 712

Query: 293 VNRDFSMQ-------RFPHKRKSA-------RKIEDSTAEPLHQGGEGDENFGMHPVSSS 338
           +N++ S Q       +  HK  +A         +  +  EP+        +F + P    
Sbjct: 713 MNKNASQQMGMNKRTKLSHKPSAADSQPAISPTLVPALPEPI------PPSFSLTPSHEE 766

Query: 339 YDDKNAMKSMFSQELSFCEKVKDKLRDDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRY 398
           Y   + +K     + +F             EFL+  +LY+ ++I R+ L +     +G  
Sbjct: 767 YAFFDRVKKFIGNKQTFG------------EFLKLCNLYSADLIDRNVLVNRAAGFIGAN 814

Query: 399 PDLMDGFNGFLARCEKSEELL 419
            ++M  F  F+   E  +EL+
Sbjct: 815 QEIMSWFKRFM-HIEPKDELI 834



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 74/340 (21%), Positives = 133/340 (39%), Gaps = 61/340 (17%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           ++P+   +A+++++++K RF     VY  FLDI+  ++ +      V Q V  LF  HP 
Sbjct: 282 QQPI-LNDALSYLDQVKVRFVEQPEVYNRFLDIMKDFKSQAIDTPGVIQRVSTLFNGHPA 340

Query: 186 LLEEFTHFLP----------DSSGAASIHYVPSGRNSILRDRSS---------AMPTA-- 224
           L++ F  FLP          D+  A  +   PSG N+I    +S         A PTA  
Sbjct: 341 LIQGFNTFLPPGYRIECGTDDNPDAIRV-TTPSGTNTISMQSASRPSLGAPEAAGPTAAS 399

Query: 225 ----------------RQVHVDKKERAMASHADRDLSVDRPDPDHDRVLLKSDKDQRRRG 268
                           +  HV ++++    H         P   H    +   + Q R  
Sbjct: 400 APPSRPEYYDQPRSAWQHGHVQQQQQQQQGHPPGAAGSYSPKSQHMATGMYGQQQQSRHN 459

Query: 269 EKERERRD----------------DHRRERERDDRDFENDVNRDFSMQRFPHKRKSARKI 312
             +  + D                 H++E +R     +N V+   +  R P  +      
Sbjct: 460 SSQDTQYDYQAQHDQQTPSDAAAMAHQQE-QRGVSQLQNAVSVATAAGRQPMVQLPPGSH 518

Query: 313 EDSTAEPLHQGGEGDENFGMHPVSSSYDDKNAMKSMFSQELSFCEKVKDKLRDD---YQE 369
               ++P++    G    G+ P       +  ++  F+  +S+  K+K++  D    Y++
Sbjct: 519 TPGPSQPMNSLAGGIGPSGVLPGQVDAAKRGPVE--FNHAISYVNKIKNRFSDSPEIYKQ 576

Query: 370 FLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFL 409
           FL  L  Y +E     ++ + V  L G  PDL++ F  FL
Sbjct: 577 FLEILQTYQRESKPIQDVYTQVTHLFGAAPDLLEDFKQFL 616



 Score = 47.0 bits (110), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 35/65 (53%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFN 105
           N A++Y+  +K+ F D  E Y  FLE+++ ++ +      V  +V  LF    DL+  F 
Sbjct: 554 NHAISYVNKIKNRFSDSPEIYKQFLEILQTYQRESKPIQDVYTQVTHLFGAAPDLLEDFK 613

Query: 106 TFLPK 110
            FLP+
Sbjct: 614 QFLPE 618


>gi|440635412|gb|ELR05331.1| hypothetical protein GMDG_07314 [Geomyces destructans 20631-21]
          Length = 1464

 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 82/248 (33%), Positives = 124/248 (50%), Gaps = 15/248 (6%)

Query: 496 PIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHM 554
           P  ++ LSNC    PSYRLLPK   + + S R E+   VLND W S  T  SED  F   
Sbjct: 705 PTGKVSLSNCRGLGPSYRLLPKRERLKACSGRDEMCYSVLNDDWASHPTWASEDSGFVAH 764

Query: 555 RKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF--- 611
           RKN +EE L R E++R + D  +E+     + +E +  +I N         R+   F   
Sbjct: 765 RKNHFEEGLHRIEEERHDYDFNIEANAKVIQLLEPIAHQILNLQAHEMPTFRMPSGFGGQ 824

Query: 612 -TALNLRCIERLYG-DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAE 669
             ++  R  +++YG + G +V   L K+    +PV+L RLKQK EEW   + +++KVW  
Sbjct: 825 SQSIYKRIFKKIYGTEKGNEVAADLFKDPIAVVPVVLARLKQKDEEWRFTQREWDKVWHV 884

Query: 670 IYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIV 729
                Y KSLDH     K  D K L  +A++  I+   E+++++  +          S V
Sbjct: 885 QTQAMYLKSLDHMGISVKGADKKLLAPRAMTELIRNKHEEQKRQRSLT---------SNV 935

Query: 730 PHLEFEYS 737
           P  +F Y+
Sbjct: 936 PRYQFLYT 943



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 49/93 (52%), Positives = 59/93 (63%), Gaps = 1/93 (1%)

Query: 23  GEPSGQTQVVGGGGG-GGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRI 81
           G P G      G    G  Q+   NDAL+YL  VK  F D+ + Y+ FL++MKDFK+Q I
Sbjct: 186 GGPGGAAHPAQGAPALGQGQQPILNDALSYLDQVKVQFVDQPDVYNRFLDIMKDFKSQAI 245

Query: 82  DTAGVIARVKELFKGHRDLILGFNTFLPKGYEI 114
           DT GVI RV +LF GH +LI GFNTFLP GY I
Sbjct: 246 DTPGVINRVSDLFAGHPNLIQGFNTFLPPGYRI 278



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 39/72 (54%), Positives = 51/72 (70%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           + PVEF  AI++VNKIK RFQ    +YK FL+IL  Y++E+K I +VY +V  LF   PD
Sbjct: 428 RGPVEFNHAISYVNKIKNRFQDKPEIYKQFLEILQTYQRESKPIQDVYAQVTTLFGTAPD 487

Query: 186 LLEEFTHFLPDS 197
           LLE+F  FLP+S
Sbjct: 488 LLEDFKQFLPES 499



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 38/65 (58%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFN 105
           N A++Y+  +K+ FQDK E Y  FLE+++ ++ +      V A+V  LF    DL+  F 
Sbjct: 434 NHAISYVNKIKNRFQDKPEIYKQFLEILQTYQRESKPIQDVYAQVTTLFGTAPDLLEDFK 493

Query: 106 TFLPK 110
            FLP+
Sbjct: 494 QFLPE 498



 Score = 48.1 bits (113), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 21/70 (30%), Positives = 40/70 (57%), Gaps = 1/70 (1%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           ++P+   +A+++++++K +F     VY  FLDI+  ++ +      V   V  LF  HP+
Sbjct: 205 QQPI-LNDALSYLDQVKVQFVDQPDVYNRFLDIMKDFKSQAIDTPGVINRVSDLFAGHPN 263

Query: 186 LLEEFTHFLP 195
           L++ F  FLP
Sbjct: 264 LIQGFNTFLP 273



 Score = 42.7 bits (99), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 3/64 (4%)

Query: 349 FSQELSFCEKVKDKLRDD---YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGF 405
           F+  +S+  K+K++ +D    Y++FL  L  Y +E     ++ + V  L G  PDL++ F
Sbjct: 433 FNHAISYVNKIKNRFQDKPEIYKQFLEILQTYQRESKPIQDVYAQVTTLFGTAPDLLEDF 492

Query: 406 NGFL 409
             FL
Sbjct: 493 KQFL 496


>gi|317036271|ref|XP_001398012.2| hypothetical protein ANI_1_940144 [Aspergillus niger CBS 513.88]
          Length = 1611

 Score =  124 bits (310), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 81/256 (31%), Positives = 127/256 (49%), Gaps = 13/256 (5%)

Query: 500  LDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMRKNQ 558
            ++LS+C    PSYRLLPK       S R +L   VLND W S  T  SED  F   RKNQ
Sbjct: 823  VNLSHCRSLGPSYRLLPKRERQKPCSGRDQLCYSVLNDEWASHPTWASEDSGFVAHRKNQ 882

Query: 559  YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKI----NNNTIKTDGPIRVEDHFTAL 614
            +E++L R E+DR + D  +E+   T + +E ++++              P  +     A+
Sbjct: 883  FEDALHRIEEDRHDYDHHIEACTRTIQLIEPIVQQFLVMSEAECAAFKLPPGLGGQSEAI 942

Query: 615  NLRCIERLYG-DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSK 673
              R I+++Y    G  ++  + +  +  LP++L RLKQK EEW   + +++K+W E   K
Sbjct: 943  YQRVIKKIYDRQRGEKIIKEMFERPTHVLPIVLFRLKQKCEEWKASQREWDKIWREQMQK 1002

Query: 674  NYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLE 733
             Y +SLDH++   KQ D K   AK +  EI+   E+ R        +     ++     E
Sbjct: 1003 AYWRSLDHQAIASKQVDKKLFVAKHIHTEIQNKFEESRN-------LRKSGYQTAKHQFE 1055

Query: 734  FEYSDPDIHEDLYQLI 749
            F + DP +  D   L+
Sbjct: 1056 FTFDDPAVIIDATHLL 1071



 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 53/115 (46%), Positives = 63/115 (54%), Gaps = 10/115 (8%)

Query: 16  RPMISSRGEPSGQTQVVGGGGG----------GGAQKLTTNDALAYLKAVKDIFQDKREK 65
           R  +   G P GQ  +   G G             Q+   NDAL+YL  VK  F D+ + 
Sbjct: 235 RSYMQHPGGPPGQPMMGFNGSGPQIPGNVAALAQGQQPILNDALSYLDQVKVRFVDQPDV 294

Query: 66  YDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLED 120
           Y+ FL++MKDFK+Q IDT GVI RV  LF GH  LI GFNTFLP GY I    ED
Sbjct: 295 YNRFLDIMKDFKSQAIDTPGVIQRVSTLFNGHPALIQGFNTFLPPGYRIECGTED 349



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 38/72 (52%), Positives = 50/72 (69%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           + PVEF  AI++VNKIK RF     +YK FL+IL  Y++E+K I +VY +V  LF   PD
Sbjct: 526 RGPVEFNHAISYVNKIKNRFASAPEIYKQFLEILQTYQRESKPIGDVYAQVTQLFNTAPD 585

Query: 186 LLEEFTHFLPDS 197
           LLE+F  FLP+S
Sbjct: 586 LLEDFKQFLPES 597



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 55/111 (49%), Gaps = 18/111 (16%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           ++P+   +A+++++++K RF     VY  FLDI+  ++ +      V Q V  LF  HP 
Sbjct: 270 QQPI-LNDALSYLDQVKVRFVDQPDVYNRFLDIMKDFKSQAIDTPGVIQRVSTLFNGHPA 328

Query: 186 LLEEFTHFLP----------DSSGAASIHYVPSGRNSILRDRSSAMPTARQ 226
           L++ F  FLP          D+  A  +   PSG N++      +MP AR 
Sbjct: 329 LIQGFNTFLPPGYRIECGTEDNPDAIRV-TTPSGTNTL------SMPRARH 372



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 6/96 (6%)

Query: 21  SRGEPSGQTQVVGGGGGGGAQKLTT------NDALAYLKAVKDIFQDKREKYDDFLEVMK 74
           S  +P      VG G   G+Q LT       N A++Y+  +K+ F    E Y  FLE+++
Sbjct: 501 SLTQPMNNLAGVGTGMLQGSQDLTKRGPVEFNHAISYVNKIKNRFASAPEIYKQFLEILQ 560

Query: 75  DFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPK 110
            ++ +      V A+V +LF    DL+  F  FLP+
Sbjct: 561 TYQRESKPIGDVYAQVTQLFNTAPDLLEDFKQFLPE 596



 Score = 40.8 bits (94), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 22/78 (28%), Positives = 43/78 (55%), Gaps = 3/78 (3%)

Query: 351 QELSFCEKVKDKL--RDDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGF 408
           +E +F ++VK  +  +  + EFL+  +LY+ ++I R  L       +G  P+LM  F  F
Sbjct: 742 EEFAFFDRVKKYIGNKQTFSEFLKLCNLYSTDLIDRHVLVKRAASYIGSNPELMAWFKRF 801

Query: 409 LARCEKSEELLADVMSKK 426
           +   ++ E+ + DV +K+
Sbjct: 802 M-HVDEPEDKIIDVKAKQ 818


>gi|154283751|ref|XP_001542671.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
 gi|150410851|gb|EDN06239.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
          Length = 1589

 Score =  124 bits (310), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 78/218 (35%), Positives = 115/218 (52%), Gaps = 6/218 (2%)

Query: 500  LDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMRKNQ 558
            ++LS+C    PSYRLLPK       S R ++   VLND W S  T  SED  F   RKNQ
Sbjct: 795  VNLSHCRALGPSYRLLPKRERQKPCSGRDDMCQSVLNDEWASHPTWASEDSGFVAHRKNQ 854

Query: 559  YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNT----IKTDGPIRVEDHFTAL 614
            YE+SL R E+DR + D  +E+   T + +E L++++   T         P  +      +
Sbjct: 855  YEDSLHRIEEDRHDYDHHIEACIRTIQLMEPLVQQMATMTEAERANFKLPPGLGGQSETI 914

Query: 615  NLRCIERLYG-DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSK 673
              R I+++Y  + G  V+D +       LP++L RLKQK EEW   + +++KVW E   K
Sbjct: 915  YRRIIKKIYDRERGQRVIDEMFARPCSVLPIVLARLKQKCEEWKASQREWDKVWREQMQK 974

Query: 674  NYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKR 711
             + +SLDH++   K  D K   AK +  EI+   E+ R
Sbjct: 975  GFWRSLDHQAIIMKGSDKKLFIAKHIQHEIQAKLEELR 1012



 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 45/81 (55%), Positives = 54/81 (66%)

Query: 40  AQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRD 99
            Q+   NDAL+YL  VK  F ++ + Y+ FL++MKDFK+Q IDT GVI RV  LF GH  
Sbjct: 225 GQQPILNDALSYLDQVKVRFVEQPDVYNRFLDIMKDFKSQAIDTPGVIQRVSTLFNGHPT 284

Query: 100 LILGFNTFLPKGYEITLPLED 120
           LI GFNTFLP GY I    ED
Sbjct: 285 LIQGFNTFLPPGYRIECGTED 305



 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/70 (52%), Positives = 47/70 (67%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           + PVEF  AI++VNKIK RF      YK FL+IL  Y++E+K I +VY +V  LF   PD
Sbjct: 494 RGPVEFNHAISYVNKIKNRFADSPDTYKQFLEILQTYQRESKPIQDVYAQVTLLFNSAPD 553

Query: 186 LLEEFTHFLP 195
           LLE+F  FLP
Sbjct: 554 LLEDFKQFLP 563



 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 64/135 (47%), Gaps = 20/135 (14%)

Query: 101 ILGFNTFLPKGY--EITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDI 158
           +LGFN   P      ++   + +QP         +A+++++++K RF     VY  FLDI
Sbjct: 204 MLGFNGNAPPQIPGSVSALAQGQQP------ILNDALSYLDQVKVRFVEQPDVYNRFLDI 257

Query: 159 LNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLP----------DSSGAASIHYVPS 208
           +  ++ +      V Q V  LF  HP L++ F  FLP          D+  A  +   PS
Sbjct: 258 MKDFKSQAIDTPGVIQRVSTLFNGHPTLIQGFNTFLPPGYRIECGTEDNPDAIRV-TTPS 316

Query: 209 GRNSILRDRSSAMPT 223
           G N+I   +S+A P+
Sbjct: 317 GTNTISM-QSAARPS 330



 Score = 46.2 bits (108), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 21/64 (32%), Positives = 35/64 (54%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFN 105
           N A++Y+  +K+ F D  + Y  FLE+++ ++ +      V A+V  LF    DL+  F 
Sbjct: 500 NHAISYVNKIKNRFADSPDTYKQFLEILQTYQRESKPIQDVYAQVTLLFNSAPDLLEDFK 559

Query: 106 TFLP 109
            FLP
Sbjct: 560 QFLP 563


>gi|350633092|gb|EHA21458.1| hypothetical protein ASPNIDRAFT_214585 [Aspergillus niger ATCC 1015]
          Length = 1600

 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 81/256 (31%), Positives = 127/256 (49%), Gaps = 13/256 (5%)

Query: 500  LDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMRKNQ 558
            ++LS+C    PSYRLLPK       S R +L   VLND W S  T  SED  F   RKNQ
Sbjct: 812  VNLSHCRSLGPSYRLLPKRERQKPCSGRDQLCYSVLNDEWASHPTWASEDSGFVAHRKNQ 871

Query: 559  YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKI----NNNTIKTDGPIRVEDHFTAL 614
            +E++L R E+DR + D  +E+   T + +E ++++              P  +     A+
Sbjct: 872  FEDALHRIEEDRHDYDHHIEACTRTIQLIEPIVQQFLVMSEAECAAFKLPPGLGGQSEAI 931

Query: 615  NLRCIERLYG-DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSK 673
              R I+++Y    G  ++  + +  +  LP++L RLKQK EEW   + +++K+W E   K
Sbjct: 932  YQRVIKKIYDRQRGEKIIKEMFERPTHVLPIVLFRLKQKCEEWKASQREWDKIWREQMQK 991

Query: 674  NYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLE 733
             Y +SLDH++   KQ D K   AK +  EI+   E+ R        +     ++     E
Sbjct: 992  AYWRSLDHQAIASKQVDKKLFVAKHIHTEIQNKFEESRN-------LRKSGYQTAKHQFE 1044

Query: 734  FEYSDPDIHEDLYQLI 749
            F + DP +  D   L+
Sbjct: 1045 FTFDDPAVIIDATHLL 1060



 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 53/115 (46%), Positives = 63/115 (54%), Gaps = 10/115 (8%)

Query: 16  RPMISSRGEPSGQTQVVGGGGG----------GGAQKLTTNDALAYLKAVKDIFQDKREK 65
           R  +   G P GQ  +   G G             Q+   NDAL+YL  VK  F D+ + 
Sbjct: 224 RSYMQHPGGPPGQPMMGFNGSGPQIPGNVAALAQGQQPILNDALSYLDQVKVRFVDQPDV 283

Query: 66  YDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLED 120
           Y+ FL++MKDFK+Q IDT GVI RV  LF GH  LI GFNTFLP GY I    ED
Sbjct: 284 YNRFLDIMKDFKSQAIDTPGVIQRVSTLFNGHPALIQGFNTFLPPGYRIECGTED 338



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 38/72 (52%), Positives = 50/72 (69%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           + PVEF  AI++VNKIK RF     +YK FL+IL  Y++E+K I +VY +V  LF   PD
Sbjct: 515 RGPVEFNHAISYVNKIKNRFASAPEIYKQFLEILQTYQRESKPIGDVYAQVTQLFNTAPD 574

Query: 186 LLEEFTHFLPDS 197
           LLE+F  FLP+S
Sbjct: 575 LLEDFKQFLPES 586



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 55/111 (49%), Gaps = 18/111 (16%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           ++P+   +A+++++++K RF     VY  FLDI+  ++ +      V Q V  LF  HP 
Sbjct: 259 QQPI-LNDALSYLDQVKVRFVDQPDVYNRFLDIMKDFKSQAIDTPGVIQRVSTLFNGHPA 317

Query: 186 LLEEFTHFLP----------DSSGAASIHYVPSGRNSILRDRSSAMPTARQ 226
           L++ F  FLP          D+  A  +   PSG N++      +MP AR 
Sbjct: 318 LIQGFNTFLPPGYRIECGTEDNPDAIRV-TTPSGTNTL------SMPRARH 361



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 6/96 (6%)

Query: 21  SRGEPSGQTQVVGGGGGGGAQKLTT------NDALAYLKAVKDIFQDKREKYDDFLEVMK 74
           S  +P      VG G   G+Q LT       N A++Y+  +K+ F    E Y  FLE+++
Sbjct: 490 SLTQPMNNLAGVGTGMLQGSQDLTKRGPVEFNHAISYVNKIKNRFASAPEIYKQFLEILQ 549

Query: 75  DFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPK 110
            ++ +      V A+V +LF    DL+  F  FLP+
Sbjct: 550 TYQRESKPIGDVYAQVTQLFNTAPDLLEDFKQFLPE 585



 Score = 40.8 bits (94), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 22/78 (28%), Positives = 43/78 (55%), Gaps = 3/78 (3%)

Query: 351 QELSFCEKVKDKL--RDDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGF 408
           +E +F ++VK  +  +  + EFL+  +LY+ ++I R  L       +G  P+LM  F  F
Sbjct: 731 EEFAFFDRVKKYIGNKQTFSEFLKLCNLYSTDLIDRHVLVKRAASYIGSNPELMAWFKRF 790

Query: 409 LARCEKSEELLADVMSKK 426
           +   ++ E+ + DV +K+
Sbjct: 791 M-HVDEPEDKIIDVKAKQ 807


>gi|325091438|gb|EGC44748.1| transcriptional repressor Sin3p [Ajellomyces capsulatus H88]
          Length = 1633

 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 78/218 (35%), Positives = 115/218 (52%), Gaps = 6/218 (2%)

Query: 500  LDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMRKNQ 558
            ++LS+C    PSYRLLPK       S R ++   VLND W S  T  SED  F   RKNQ
Sbjct: 839  VNLSHCRALGPSYRLLPKRERQKPCSGRDDMCQSVLNDEWASHPTWASEDSGFVAHRKNQ 898

Query: 559  YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNT----IKTDGPIRVEDHFTAL 614
            YE+SL R E+DR + D  +E+   T + +E L++++   T         P  +      +
Sbjct: 899  YEDSLHRIEEDRHDYDHHIEACIRTIQLMEPLVQQMATMTEAERANFKLPPGLGGQSETI 958

Query: 615  NLRCIERLYG-DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSK 673
              R I+++Y  + G  V+D +       LP++L RLKQK EEW   + +++KVW E   K
Sbjct: 959  YRRIIKKIYDRERGQRVIDEMFARPCSVLPIVLARLKQKCEEWKASQREWDKVWREQMQK 1018

Query: 674  NYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKR 711
             + +SLDH++   K  D K   AK +  EI+   E+ R
Sbjct: 1019 GFWRSLDHQAIIMKGSDKKLFIAKHIQHEIQAKLEELR 1056



 Score = 93.6 bits (231), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 45/81 (55%), Positives = 54/81 (66%)

Query: 40  AQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRD 99
            Q+   NDAL+YL  VK  F ++ + Y+ FL++MKDFK+Q IDT GVI RV  LF GH  
Sbjct: 269 GQQPILNDALSYLDQVKVRFVEQPDVYNRFLDIMKDFKSQAIDTPGVIQRVSTLFNGHPT 328

Query: 100 LILGFNTFLPKGYEITLPLED 120
           LI GFNTFLP GY I    ED
Sbjct: 329 LIQGFNTFLPPGYRIECGTED 349



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 37/70 (52%), Positives = 47/70 (67%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           + PVEF  AI++VNKIK RF      YK FL+IL  Y++E+K I +VY +V  LF   PD
Sbjct: 538 RGPVEFNHAISYVNKIKNRFADSPDTYKQFLEILQTYQRESKPIQDVYAQVTLLFNSAPD 597

Query: 186 LLEEFTHFLP 195
           LLE+F  FLP
Sbjct: 598 LLEDFKQFLP 607



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 64/135 (47%), Gaps = 20/135 (14%)

Query: 101 ILGFNTFLPKGY--EITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDI 158
           +LGFN   P      ++   + +QP         +A+++++++K RF     VY  FLDI
Sbjct: 248 MLGFNGNAPPQIPGSVSALAQGQQP------ILNDALSYLDQVKVRFVEQPDVYNRFLDI 301

Query: 159 LNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLP----------DSSGAASIHYVPS 208
           +  ++ +      V Q V  LF  HP L++ F  FLP          D+  A  +   PS
Sbjct: 302 MKDFKSQAIDTPGVIQRVSTLFNGHPTLIQGFNTFLPPGYRIECGTEDNPDAIRV-TTPS 360

Query: 209 GRNSILRDRSSAMPT 223
           G N+I   +S+A P+
Sbjct: 361 GTNTISM-QSAARPS 374



 Score = 46.2 bits (108), Expect = 0.092,   Method: Compositional matrix adjust.
 Identities = 21/64 (32%), Positives = 35/64 (54%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFN 105
           N A++Y+  +K+ F D  + Y  FLE+++ ++ +      V A+V  LF    DL+  F 
Sbjct: 544 NHAISYVNKIKNRFADSPDTYKQFLEILQTYQRESKPIQDVYAQVTLLFNSAPDLLEDFK 603

Query: 106 TFLP 109
            FLP
Sbjct: 604 QFLP 607


>gi|225561997|gb|EEH10277.1| transcriptional repressor Sin3p [Ajellomyces capsulatus G186AR]
          Length = 1633

 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 78/218 (35%), Positives = 115/218 (52%), Gaps = 6/218 (2%)

Query: 500  LDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMRKNQ 558
            ++LS+C    PSYRLLPK       S R ++   VLND W S  T  SED  F   RKNQ
Sbjct: 839  VNLSHCRALGPSYRLLPKRERQKPCSGRDDMCQSVLNDEWASHPTWASEDSGFVAHRKNQ 898

Query: 559  YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNT----IKTDGPIRVEDHFTAL 614
            YE+SL R E+DR + D  +E+   T + +E L++++   T         P  +      +
Sbjct: 899  YEDSLHRIEEDRHDYDHHIEACIRTIQLMEPLVQQMATMTEAERANFKLPPGLGGQSETI 958

Query: 615  NLRCIERLYG-DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSK 673
              R I+++Y  + G  V+D +       LP++L RLKQK EEW   + +++KVW E   K
Sbjct: 959  YRRIIKKIYDRERGQRVIDEMFARPCSVLPIVLARLKQKCEEWKASQREWDKVWREQMQK 1018

Query: 674  NYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKR 711
             + +SLDH++   K  D K   AK +  EI+   E+ R
Sbjct: 1019 GFWRSLDHQAIIMKGSDKKLFIAKHIQHEIQAKLEELR 1056



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 45/81 (55%), Positives = 54/81 (66%)

Query: 40  AQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRD 99
            Q+   NDAL+YL  VK  F ++ + Y+ FL++MKDFK+Q IDT GVI RV  LF GH  
Sbjct: 269 GQQPILNDALSYLDQVKVRFVEQPDVYNRFLDIMKDFKSQAIDTPGVIQRVSTLFNGHPT 328

Query: 100 LILGFNTFLPKGYEITLPLED 120
           LI GFNTFLP GY I    ED
Sbjct: 329 LIQGFNTFLPPGYRIECGTED 349



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/70 (52%), Positives = 47/70 (67%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           + PVEF  AI++VNKIK RF      YK FL+IL  Y++E+K I +VY +V  LF   PD
Sbjct: 538 RGPVEFNHAISYVNKIKNRFADSPDTYKQFLEILQTYQRESKPIQDVYAQVTLLFNAAPD 597

Query: 186 LLEEFTHFLP 195
           LLE+F  FLP
Sbjct: 598 LLEDFKQFLP 607



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 56/108 (51%), Gaps = 13/108 (12%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           ++P+   +A+++++++K RF     VY  FLDI+  ++ +      V Q V  LF  HP 
Sbjct: 270 QQPI-LNDALSYLDQVKVRFVEQPDVYNRFLDIMKDFKSQAIDTPGVIQRVSTLFNGHPT 328

Query: 186 LLEEFTHFLP----------DSSGAASIHYVPSGRNSILRDRSSAMPT 223
           L++ F  FLP          D+  A  +   PSG N+I   +S+A P+
Sbjct: 329 LIQGFNTFLPPGYRIECGTEDNPDAIRV-TTPSGTNTISM-QSAARPS 374



 Score = 46.6 bits (109), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 21/64 (32%), Positives = 35/64 (54%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFN 105
           N A++Y+  +K+ F D  + Y  FLE+++ ++ +      V A+V  LF    DL+  F 
Sbjct: 544 NHAISYVNKIKNRFADSPDTYKQFLEILQTYQRESKPIQDVYAQVTLLFNAAPDLLEDFK 603

Query: 106 TFLP 109
            FLP
Sbjct: 604 QFLP 607


>gi|240275606|gb|EER39120.1| transcriptional repressor Sin3p [Ajellomyces capsulatus H143]
          Length = 1657

 Score =  123 bits (309), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 78/218 (35%), Positives = 115/218 (52%), Gaps = 6/218 (2%)

Query: 500  LDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMRKNQ 558
            ++LS+C    PSYRLLPK       S R ++   VLND W S  T  SED  F   RKNQ
Sbjct: 863  VNLSHCRALGPSYRLLPKRERQKPCSGRDDMCQSVLNDEWASHPTWASEDSGFVAHRKNQ 922

Query: 559  YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNT----IKTDGPIRVEDHFTAL 614
            YE+SL R E+DR + D  +E+   T + +E L++++   T         P  +      +
Sbjct: 923  YEDSLHRIEEDRHDYDHHIEACIRTIQLMEPLVQQMATMTEAERANFKLPPGLGGQSETI 982

Query: 615  NLRCIERLYG-DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSK 673
              R I+++Y  + G  V+D +       LP++L RLKQK EEW   + +++KVW E   K
Sbjct: 983  YRRIIKKIYDRERGQRVIDEMFARPCSVLPIVLARLKQKCEEWKASQREWDKVWREQMQK 1042

Query: 674  NYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKR 711
             + +SLDH++   K  D K   AK +  EI+   E+ R
Sbjct: 1043 GFWRSLDHQAIIMKGSDKKLFIAKHIQHEIQAKLEELR 1080



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 37/70 (52%), Positives = 47/70 (67%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           + PVEF  AI++VNKIK RF      YK FL+IL  Y++E+K I +VY +V  LF   PD
Sbjct: 562 RGPVEFNHAISYVNKIKNRFADSPDTYKQFLEILQTYQRESKPIQDVYAQVTLLFNSAPD 621

Query: 186 LLEEFTHFLP 195
           LLE+F  FLP
Sbjct: 622 LLEDFKQFLP 631



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 55/126 (43%), Gaps = 19/126 (15%)

Query: 14  IKRPMISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDD----- 68
           I +P+ S    P G    +    G  A       ++    A   +F ++ +++ D     
Sbjct: 248 IHQPVASKGHNPLGGPNGLLSNLGANAAPNPPQGSIPSSNAPGGLFGNQMQQHTDGPPRT 307

Query: 69  FL-------EVMKDFKAQRI-------DTAGVIARVKELFKGHRDLILGFNTFLPKGYEI 114
           +L       + M  F AQRI       DT GVI RV  LF GH  LI GFNTFLP GY I
Sbjct: 308 YLHQGQPPQQSMLGFNAQRIRLLTMAIDTPGVIQRVSTLFNGHPTLIQGFNTFLPPGYRI 367

Query: 115 TLPLED 120
               ED
Sbjct: 368 ECGTED 373



 Score = 46.2 bits (108), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 21/64 (32%), Positives = 35/64 (54%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFN 105
           N A++Y+  +K+ F D  + Y  FLE+++ ++ +      V A+V  LF    DL+  F 
Sbjct: 568 NHAISYVNKIKNRFADSPDTYKQFLEILQTYQRESKPIQDVYAQVTLLFNSAPDLLEDFK 627

Query: 106 TFLP 109
            FLP
Sbjct: 628 QFLP 631


>gi|358055365|dbj|GAA98485.1| hypothetical protein E5Q_05171 [Mixia osmundae IAM 14324]
          Length = 1359

 Score =  123 bits (309), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 128/486 (26%), Positives = 214/486 (44%), Gaps = 64/486 (13%)

Query: 503  SNCERCTPSYRLLPKNY--LIPSASQRTELGAEVLNDHWVS--VTSGSEDYSFKHMRKNQ 558
            ++  +  PSYR LP     +    S R  L  +VLND  +S    + ++D  F   +KN 
Sbjct: 555  ADSAKFGPSYRKLPSTAREVNQPCSGRDALCWDVLNDELISHPTWAAADDGFFIAHKKNT 614

Query: 559  YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TAL 614
            +EE+L R E++RFE D  +E+   T   +E +  +I     +   P R++        ++
Sbjct: 615  WEENLQRSEEERFEYDFHIEANARTIALLEPIAARIQLMDPEDRIPFRLKTGLGGQSKSI 674

Query: 615  NLRCIERLYG-DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSK 673
              R ++++YG +HG++V+  L +N  +A+P++L RLKQK EEW R   ++N+VW EI +K
Sbjct: 675  YQRVVKKVYGKEHGVNVIHALHENPCVAVPIVLARLKQKDEEWKRALREWNRVWREIDAK 734

Query: 674  NYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLE 733
            N+ KSLDH+    K QD K++  K   +EI+ I   +R++    L  +    +     L 
Sbjct: 735  NFFKSLDHKGAEAKVQDKKAVQMKTFVSEIETI---RREQQQRSLIGSLDREQPPTQQLA 791

Query: 734  FEYSDPDIHEDLYQL-------IKYSCGEMCTTEQLDKVMKIWT--TFLEPMLGVPSRPQ 784
             +  D  I  D+ +L       +  +   +    +++ ++K++    FL P L V    Q
Sbjct: 792  AQIEDSSILFDIVKLSLSYLDRVSATGYSLLDKSRIEALLKLYLRDVFLIPQLEVDKNIQ 851

Query: 785  GAEDTEDVVKAKSHTVKSRAASVGDSDGSPDGDAAAMTSKHSNPSRNGDESIPPEQSSSS 844
             A             V + AAS  D D S DG + A           G+E+  P  +   
Sbjct: 852  AAV-----------FVATDAAS--DVDPSEDGASNA-----------GEEAPTPPIAGKK 887

Query: 845  RAWLPNGDHGIKEDVSVEADHNARKSDNFCDSSEQDKVQNNAAMAD--ETSGISKQASTN 902
             A     D  +++ V   AD  AR       +     + + A +AD    S IS   + +
Sbjct: 888  GAARRAAD--LRKQVLRNADRTARGRKGEASAPVSPMLSSPALVADPGSPSAISTDGTED 945

Query: 903  ERLIGTNA-----AIAAAADQSNGRSNIENTSGLSVAHSRPGNHIVEGGLELRSSNEILP 957
              L    A      + A     +G   +E    L           V+  +E+ +S   LP
Sbjct: 946  LNLPDATADEDMPPVPATNAGLDGMEGVETVDALP----------VQSTIEVETSTSPLP 995

Query: 958  SSEGGE 963
              EG E
Sbjct: 996  LVEGAE 1001



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 80/293 (27%), Positives = 122/293 (41%), Gaps = 32/293 (10%)

Query: 123 PPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQD 182
           P  K P+EF  AI +VNKIK RF G+   YK FL+IL  Y+KE + I +VY +V  LF  
Sbjct: 254 PGGKAPIEFNHAITYVNKIKNRFVGEPDTYKKFLEILQTYQKEGRPIQDVYAQVSGLFGH 313

Query: 183 HPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQVHVDKKERAMASHADR 242
             DLL+EF  FLPD +     +Y  +         +S M      H     R+ ++H  +
Sbjct: 314 AEDLLDEFKQFLPDPAQPQEDNYFGTPGQDPSNAGASGM---YDPHAALPGRSASAHRQK 370

Query: 243 DLSVDRPDPDHDRVLLKSDKDQRRRGEKERERRDDHRRERERDDRDFENDVNRDFSMQRF 302
               D P P       K  +  R  G +  + +   R+ +               +M + 
Sbjct: 371 S---DGPPP------AKKKRSARPAGSQLEDAKGRPRKRKPPTT-----------AMPQE 410

Query: 303 PHKRKS---ARKIEDSTAEPLHQGGEGDENFGMHPVSSSYDDKNAMKSMFSQELSFCEKV 359
           P        A  +   T  P +       N+G+               + + E SF E+V
Sbjct: 411 PMPLPEPLYAPPLPTRTMPPAYN----LSNYGVQLPHHLPIIPPVPPPIEADESSFFERV 466

Query: 360 KDKLRD--DYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLA 410
              + D   Y +FL+ L+L+ +++I    L S     LG+ PDL   F G + 
Sbjct: 467 AKWIDDKKTYHDFLKLLNLFAQDLIDLPALVSRAYLFLGQNPDLWAQFRGIVG 519



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 46/72 (63%), Positives = 51/72 (70%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
           L   DAL+YL  VK  F+D  E Y+ FL+VMK+FK Q IDT GVIARV  LFKGH  LI 
Sbjct: 87  LNVKDALSYLDDVKLRFRDVPEVYNRFLDVMKEFKTQTIDTPGVIARVSTLFKGHPALIQ 146

Query: 103 GFNTFLPKGYEI 114
           GFNTFLP GY I
Sbjct: 147 GFNTFLPPGYRI 158



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 40/69 (57%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDL 186
           +P+  ++A+++++ +K RF+    VY  FLD++  ++ +      V   V  LF+ HP L
Sbjct: 85  RPLNVKDALSYLDDVKLRFRDVPEVYNRFLDVMKEFKTQTIDTPGVIARVSTLFKGHPAL 144

Query: 187 LEEFTHFLP 195
           ++ F  FLP
Sbjct: 145 IQGFNTFLP 153



 Score = 44.7 bits (104), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 38/75 (50%)

Query: 35  GGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELF 94
           G  GG   +  N A+ Y+  +K+ F  + + Y  FLE+++ ++ +      V A+V  LF
Sbjct: 252 GTPGGKAPIEFNHAITYVNKIKNRFVGEPDTYKKFLEILQTYQKEGRPIQDVYAQVSGLF 311

Query: 95  KGHRDLILGFNTFLP 109
               DL+  F  FLP
Sbjct: 312 GHAEDLLDEFKQFLP 326


>gi|358372633|dbj|GAA89235.1| transcription factor [Aspergillus kawachii IFO 4308]
          Length = 1635

 Score =  123 bits (309), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 80/256 (31%), Positives = 127/256 (49%), Gaps = 13/256 (5%)

Query: 500  LDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMRKNQ 558
            ++LS+C    PSYRLLPK       S R +L   VLND W S  T  SED  F   RKN 
Sbjct: 848  VNLSHCRSLGPSYRLLPKRERQKPCSGRDQLCYSVLNDEWASHPTWASEDSGFVAHRKNH 907

Query: 559  YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKI----NNNTIKTDGPIRVEDHFTAL 614
            +E++L R E+DR + D  +E+   T + +E ++++              P  +     A+
Sbjct: 908  FEDALHRIEEDRHDYDHHIEACTRTIQLIEPIVQQFLVMSEAECAAFKLPPGLGGQSEAI 967

Query: 615  NLRCIERLYG-DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSK 673
              R I+++Y    G  ++  + +  +  LP++L RLKQK EEW   + +++K+W E   K
Sbjct: 968  YQRVIKKIYDRQRGEKIIKEMFERPTHVLPIVLFRLKQKCEEWKASQREWDKIWREQMQK 1027

Query: 674  NYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLE 733
             Y +SLDH++   KQ D K   AK +  EI+   E+ R        +     +++    E
Sbjct: 1028 AYWRSLDHQAIASKQVDKKLFVAKHIHTEIQNKFEESRN-------LRKSGYQTVKHQFE 1080

Query: 734  FEYSDPDIHEDLYQLI 749
            F + DP +  D   L+
Sbjct: 1081 FTFDDPAVIIDATHLL 1096



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 44/78 (56%), Positives = 53/78 (67%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
           + + DAL+YL  VK  F D+ + Y+ FL++MKDFK+Q IDT GVI RV  LF GH  LI 
Sbjct: 295 IPSQDALSYLDQVKVRFVDQPDVYNRFLDIMKDFKSQAIDTPGVIQRVSTLFNGHPALIQ 354

Query: 103 GFNTFLPKGYEITLPLED 120
           GFNTFLP GY I    ED
Sbjct: 355 GFNTFLPPGYRIECGTED 372



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 38/72 (52%), Positives = 50/72 (69%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           + PVEF  AI++VNKIK RF     +YK FL+IL  Y++E+K I +VY +V  LF   PD
Sbjct: 551 RGPVEFNHAISYVNKIKNRFASAPEIYKQFLEILQTYQRESKPIGDVYAQVTQLFNTAPD 610

Query: 186 LLEEFTHFLPDS 197
           LLE+F  FLP+S
Sbjct: 611 LLEDFKQFLPES 622



 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 53/108 (49%), Gaps = 17/108 (15%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           +  ++A+++++++K RF     VY  FLDI+  ++ +      V Q V  LF  HP L++
Sbjct: 295 IPSQDALSYLDQVKVRFVDQPDVYNRFLDIMKDFKSQAIDTPGVIQRVSTLFNGHPALIQ 354

Query: 189 EFTHFLP----------DSSGAASIHYVPSGRNSILRDRSSAMPTARQ 226
            F  FLP          D+  A  +   PSG N++      +MP AR 
Sbjct: 355 GFNTFLPPGYRIECGTEDNPDAIRV-TTPSGTNTL------SMPRARH 395



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 6/96 (6%)

Query: 21  SRGEPSGQTQVVGGGGGGGAQKLTT------NDALAYLKAVKDIFQDKREKYDDFLEVMK 74
           S  +P      VG G   G+Q LT       N A++Y+  +K+ F    E Y  FLE+++
Sbjct: 526 SLTQPMNNLAGVGTGMLQGSQDLTKRGPVEFNHAISYVNKIKNRFASAPEIYKQFLEILQ 585

Query: 75  DFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPK 110
            ++ +      V A+V +LF    DL+  F  FLP+
Sbjct: 586 TYQRESKPIGDVYAQVTQLFNTAPDLLEDFKQFLPE 621



 Score = 40.8 bits (94), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 22/78 (28%), Positives = 43/78 (55%), Gaps = 3/78 (3%)

Query: 351 QELSFCEKVKDKL--RDDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGF 408
           +E +F ++VK  +  +  + EFL+  +LY+ ++I R  L       +G  P+LM  F  F
Sbjct: 767 EEFAFFDRVKKYIGNKQTFSEFLKLCNLYSTDLIDRHVLVKRAASYIGSNPELMAWFKRF 826

Query: 409 LARCEKSEELLADVMSKK 426
           +   ++ E+ + DV +K+
Sbjct: 827 M-HVDEPEDKIIDVKAKQ 843


>gi|134083570|emb|CAL00485.1| unnamed protein product [Aspergillus niger]
          Length = 1531

 Score =  123 bits (309), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 81/256 (31%), Positives = 127/256 (49%), Gaps = 13/256 (5%)

Query: 500 LDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMRKNQ 558
           ++LS+C    PSYRLLPK       S R +L   VLND W S  T  SED  F   RKNQ
Sbjct: 743 VNLSHCRSLGPSYRLLPKRERQKPCSGRDQLCYSVLNDEWASHPTWASEDSGFVAHRKNQ 802

Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKI----NNNTIKTDGPIRVEDHFTAL 614
           +E++L R E+DR + D  +E+   T + +E ++++              P  +     A+
Sbjct: 803 FEDALHRIEEDRHDYDHHIEACTRTIQLIEPIVQQFLVMSEAECAAFKLPPGLGGQSEAI 862

Query: 615 NLRCIERLYG-DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSK 673
             R I+++Y    G  ++  + +  +  LP++L RLKQK EEW   + +++K+W E   K
Sbjct: 863 YQRVIKKIYDRQRGEKIIKEMFERPTHVLPIVLFRLKQKCEEWKASQREWDKIWREQMQK 922

Query: 674 NYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLE 733
            Y +SLDH++   KQ D K   AK +  EI+   E+ R        +     ++     E
Sbjct: 923 AYWRSLDHQAIASKQVDKKLFVAKHIHTEIQNKFEESRN-------LRKSGYQTAKHQFE 975

Query: 734 FEYSDPDIHEDLYQLI 749
           F + DP +  D   L+
Sbjct: 976 FTFDDPAVIIDATHLL 991



 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 44/78 (56%), Positives = 53/78 (67%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
           + + DAL+YL  VK  F D+ + Y+ FL++MKDFK+Q IDT GVI RV  LF GH  LI 
Sbjct: 267 IPSQDALSYLDQVKVRFVDQPDVYNRFLDIMKDFKSQAIDTPGVIQRVSTLFNGHPALIQ 326

Query: 103 GFNTFLPKGYEITLPLED 120
           GFNTFLP GY I    ED
Sbjct: 327 GFNTFLPPGYRIECGTED 344



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 38/72 (52%), Positives = 50/72 (69%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           + PVEF  AI++VNKIK RF     +YK FL+IL  Y++E+K I +VY +V  LF   PD
Sbjct: 446 RGPVEFNHAISYVNKIKNRFASAPEIYKQFLEILQTYQRESKPIGDVYAQVTQLFNTAPD 505

Query: 186 LLEEFTHFLPDS 197
           LLE+F  FLP+S
Sbjct: 506 LLEDFKQFLPES 517



 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 17/105 (16%)

Query: 132 EEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFT 191
           ++A+++++++K RF     VY  FLDI+  ++ +      V Q V  LF  HP L++ F 
Sbjct: 270 QDALSYLDQVKVRFVDQPDVYNRFLDIMKDFKSQAIDTPGVIQRVSTLFNGHPALIQGFN 329

Query: 192 HFLP----------DSSGAASIHYVPSGRNSILRDRSSAMPTARQ 226
            FLP          D+  A  +   PSG N++      +MP AR 
Sbjct: 330 TFLPPGYRIECGTEDNPDAIRV-TTPSGTNTL------SMPRARH 367



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 6/85 (7%)

Query: 32  VGGGGGGGAQKLTT------NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAG 85
           VG G   G+Q LT       N A++Y+  +K+ F    E Y  FLE+++ ++ +      
Sbjct: 432 VGTGMLQGSQDLTKRGPVEFNHAISYVNKIKNRFASAPEIYKQFLEILQTYQRESKPIGD 491

Query: 86  VIARVKELFKGHRDLILGFNTFLPK 110
           V A+V +LF    DL+  F  FLP+
Sbjct: 492 VYAQVTQLFNTAPDLLEDFKQFLPE 516



 Score = 40.8 bits (94), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 22/78 (28%), Positives = 43/78 (55%), Gaps = 3/78 (3%)

Query: 351 QELSFCEKVKDKL--RDDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGF 408
           +E +F ++VK  +  +  + EFL+  +LY+ ++I R  L       +G  P+LM  F  F
Sbjct: 662 EEFAFFDRVKKYIGNKQTFSEFLKLCNLYSTDLIDRHVLVKRAASYIGSNPELMAWFKRF 721

Query: 409 LARCEKSEELLADVMSKK 426
           +   ++ E+ + DV +K+
Sbjct: 722 M-HVDEPEDKIIDVKAKQ 738


>gi|395334706|gb|EJF67082.1| hypothetical protein DICSQDRAFT_47468 [Dichomitus squalens LYAD-421
           SS1]
          Length = 1267

 Score =  123 bits (308), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 72/223 (32%), Positives = 125/223 (56%), Gaps = 11/223 (4%)

Query: 510 PSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMRKNQYEESLFRCED 568
           PSYR L    +  + S R  L   VLND WVS  T  SE+  F   +KNQ+E++L + E+
Sbjct: 512 PSYRRLLDTEIRMACSGRDRLCWSVLNDVWVSHPTWASEEAGFMTHKKNQFEDTLHKSEE 571

Query: 569 DRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFT----ALNLRCIERLYG 624
           +R E  + +E +  T   ++ +  +I   + +     R++        A+  R I+++YG
Sbjct: 572 ERHEFQVQIEGLTRTIATLDPIEARIETMSAEERAAFRLKPDLGGTARAIYERTIKKIYG 631

Query: 625 -DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRS 683
            D G +V+  L++  ++A+PV+L RL++K +EW R + ++N+ W E+ +KN++K+LDH+ 
Sbjct: 632 NDAGNEVLRSLQETPAVAVPVVLARLRRKDDEWRRAQREWNRTWREVDAKNFYKALDHQG 691

Query: 684 FYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRR 726
             FKQ D K + AK+   EI+     + ++ D      AGN +
Sbjct: 692 ITFKQNDKKYITAKSFVLEIENAKAAQLRKRD-----GAGNSK 729



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 47/77 (61%), Positives = 55/77 (71%)

Query: 40  AQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRD 99
           A+ L  +DAL YL AVK  FQD+ + Y+ FL++MKDFK+Q IDT GVI RV  LF GH  
Sbjct: 18  ARPLNVSDALGYLDAVKLQFQDQPDVYNHFLDIMKDFKSQVIDTPGVIERVSMLFHGHPI 77

Query: 100 LILGFNTFLPKGYEITL 116
           LI GFNTFLP GY I L
Sbjct: 78  LIQGFNTFLPPGYRIEL 94



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 83/306 (27%), Positives = 124/306 (40%), Gaps = 79/306 (25%)

Query: 130 EFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI---TEVYQEVEALFQDHPDL 186
           EF  AIN+++KIK R+  D   YK FL+IL  Y+KE + +   ++VY +V+ LF+D PDL
Sbjct: 218 EFHHAINYLSKIKNRYHDDQQTYKQFLEILQTYQKEQRHVQDQSQVYAQVQMLFKDAPDL 277

Query: 187 LEEFTHFLPD------SSGAASIHYVPSGRNSILRDRSSAMPTARQVHVDK--------- 231
           ++EF  FLP+       +G   I   P+G   +    S + P       +K         
Sbjct: 278 MDEFKDFLPEVVPPTHPAGLVGILPQPTGGPGV----SGSFPPPEPPVAEKGAKPPPKRR 333

Query: 232 ----KERAMASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERRDDHRRERERDDR 287
               K+ A A+ A    +  RP   + R    S K                         
Sbjct: 334 KRPEKDTAAAAKAPGGRAAKRPRTTNARAEPASPK------------------------- 368

Query: 288 DFENDVNRDFSMQRFPHKRKSARKIEDSTAEPLHQGGEGDENFGMHPVS---SSYDDKNA 344
                    FS  + P   +         + P+HQ         MHP S    S     A
Sbjct: 369 ---------FSPYQVPPSPQLVNMHIQQASTPMHQ--------PMHPHSIHPPSPGPMGA 411

Query: 345 MKSMFSQELSFCEKVKDKLR--DDYQEFLRCLHLY------TKEIITRSELQSLVGDLLG 396
             S    EL F ++ K  L     Y EFL+ L+L+      TK ++ R+E+    GDLL 
Sbjct: 412 TPSNTQDELLFFDRAKKALEGGGTYDEFLKLLNLFSRDIIDTKTLVDRAEVFLGDGDLLM 471

Query: 397 RYPDLM 402
           ++ DL+
Sbjct: 472 QFKDLL 477



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 38/69 (55%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDL 186
           +P+   +A+ +++ +K +FQ    VY  FLDI+  ++ +      V + V  LF  HP L
Sbjct: 19  RPLNVSDALGYLDAVKLQFQDQPDVYNHFLDIMKDFKSQVIDTPGVIERVSMLFHGHPIL 78

Query: 187 LEEFTHFLP 195
           ++ F  FLP
Sbjct: 79  IQGFNTFLP 87



 Score = 45.8 bits (107), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 18/100 (18%)

Query: 48  ALAYLKAVKDIFQDKREKYDDFLEVMKDF-KAQR--IDTAGVIARVKELFKGHRDLILGF 104
           A+ YL  +K+ + D ++ Y  FLE+++ + K QR   D + V A+V+ LFK   DL+  F
Sbjct: 222 AINYLSKIKNRYHDDQQTYKQFLEILQTYQKEQRHVQDQSQVYAQVQMLFKDAPDLMDEF 281

Query: 105 NTFLPKGYEITLP---------------LEDEQPPPKKPV 129
             FLP+    T P               +    PPP+ PV
Sbjct: 282 KDFLPEVVPPTHPAGLVGILPQPTGGPGVSGSFPPPEPPV 321



 Score = 40.4 bits (93), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 6/67 (8%)

Query: 349 FSQELSFCEKVKDKLRDD---YQEFLRCLHLYTKE---IITRSELQSLVGDLLGRYPDLM 402
           F   +++  K+K++  DD   Y++FL  L  Y KE   +  +S++ + V  L    PDLM
Sbjct: 219 FHHAINYLSKIKNRYHDDQQTYKQFLEILQTYQKEQRHVQDQSQVYAQVQMLFKDAPDLM 278

Query: 403 DGFNGFL 409
           D F  FL
Sbjct: 279 DEFKDFL 285


>gi|242820360|ref|XP_002487494.1| transcription factor (Sin3), putative [Talaromyces stipitatus ATCC
            10500]
 gi|218713959|gb|EED13383.1| transcription factor (Sin3), putative [Talaromyces stipitatus ATCC
            10500]
          Length = 1602

 Score =  123 bits (308), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 89/267 (33%), Positives = 135/267 (50%), Gaps = 22/267 (8%)

Query: 495  KPIQE---LDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYS 550
            KP QE   ++L++C    PSYRLLPK       S R EL   VLND W S  T  SED  
Sbjct: 798  KPKQETGLVNLAHCRSLGPSYRLLPKRERQKPCSGRDELCYSVLNDEWASHPTWESEDSG 857

Query: 551  FKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDG------- 603
            F   RKNQ+E++L R E+DR + D  +E+   T + +E ++++    T+ ++        
Sbjct: 858  FVAHRKNQFEDALHRIEEDRHDYDHHIEACVRTIQLIEPIVQQF---TVMSEAERAAFTL 914

Query: 604  PIRVEDHFTALNLRCIERLYG-DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSD 662
            P  +     ++  R I+++Y    G  ++  + +     LPV+L RLKQK EEW   + +
Sbjct: 915  PPGLGGQSESIYKRVIKKVYDRQRGEVIIQQMFERPCHVLPVLLYRLKQKCEEWKASQRE 974

Query: 663  FNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAA 722
            ++KVW E   K + +SLDH++   K  D K   +K +  EI+   E+ R        I A
Sbjct: 975  WDKVWREQMQKCFWRSLDHQAITNKGLDKKLFSSKNIHNEIQAKYEEGRNLRKSGYHIPA 1034

Query: 723  GNRRSIVPHLEFEYSDPDIHEDLYQLI 749
                      EFE+SDP +  D  QL+
Sbjct: 1035 H-------QFEFEFSDPAVIIDATQLL 1054



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 87/332 (26%), Positives = 137/332 (41%), Gaps = 69/332 (20%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           + PVEF  AI++VNKIK RF     +YK FL+IL  Y++E+K I +VY +V  LF   PD
Sbjct: 508 RGPVEFNHAISYVNKIKNRFASAPEIYKQFLEILQTYQRESKPIQDVYAQVTQLFHTAPD 567

Query: 186 LLEEFTHFLPDSSGA----------------------ASIHYVPSGRNSILRDRSSAMPT 223
           LLE+F  FLPDS+                          + Y  +G +S L  R   MP 
Sbjct: 568 LLEDFKQFLPDSASQNKQQAQVGRPPIDEAAPTSNLRGDVPYPATGPHSQLPGRDVKMPP 627

Query: 224 ARQVHV-------DKKERAMASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERRD 276
             Q +V        K+  A  + A    SV  P  D  R+    D    R G  +     
Sbjct: 628 MGQFNVKDSNKETKKRRGAPINVATMGASVAGPSADAARM---GDLQANRAGSVQAAGMV 684

Query: 277 DHRRERERDDRDFENDVNRDFSMQRFPHKRKSARKIEDSTAEPLHQGGEGDENFGMHPVS 336
             +R +   ++    D                +  +  +  EP+         F + P S
Sbjct: 685 --KRAKTHHNKPMPAD------------GPAVSPTLVPALPEPI------PPTFSIMPNS 724

Query: 337 SSYDDKNAMKSMFSQELSFCEKVKDKL--RDDYQEFLRCLHLYTKEIITRSELQSLVGDL 394
                          E +F ++VK  +  +  + EFL+  +LY+ ++I R+ L       
Sbjct: 725 D--------------EFAFFDRVKKFIGNKQTFGEFLKLCNLYSTDLIDRNILVKRAAGF 770

Query: 395 LGRYPDLMDGFNGFLARCEKSEELLADVMSKK 426
           +G  P+LM  F  F+   ++ E+ + D+  K+
Sbjct: 771 IGSNPELMSWFKRFV-HMDEPEDRVIDLKPKQ 801



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 51/110 (46%), Positives = 62/110 (56%), Gaps = 11/110 (10%)

Query: 16  RP-MISSRGEPSGQTQVVGGGGGGG----------AQKLTTNDALAYLKAVKDIFQDKRE 64
           RP M   +G P+ Q     G   G            Q+   NDAL+YL  VK  F ++ +
Sbjct: 219 RPYMQHPQGPPAQQLLGFNGAAPGQIPGNVAALAQGQQPILNDALSYLDQVKVRFVEQPD 278

Query: 65  KYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEI 114
            Y+ FL++MKDFK+Q IDT GVI RV  LF GH  LI GFNTFLP GY I
Sbjct: 279 VYNRFLDIMKDFKSQAIDTPGVIQRVSNLFTGHPALIQGFNTFLPPGYRI 328



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 57/125 (45%), Gaps = 19/125 (15%)

Query: 101 ILGFNTFLPKGY--EITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDI 158
           +LGFN   P      +    + +QP         +A+++++++K RF     VY  FLDI
Sbjct: 233 LLGFNGAAPGQIPGNVAALAQGQQP------ILNDALSYLDQVKVRFVEQPDVYNRFLDI 286

Query: 159 LNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLP----------DSSGAASIHYVPS 208
           +  ++ +      V Q V  LF  HP L++ F  FLP          D+  A  +   PS
Sbjct: 287 MKDFKSQAIDTPGVIQRVSNLFTGHPALIQGFNTFLPPGYRIECGTDDNPNAIRV-TTPS 345

Query: 209 GRNSI 213
           G N++
Sbjct: 346 GTNTL 350



 Score = 45.8 bits (107), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 21/64 (32%), Positives = 35/64 (54%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFN 105
           N A++Y+  +K+ F    E Y  FLE+++ ++ +      V A+V +LF    DL+  F 
Sbjct: 514 NHAISYVNKIKNRFASAPEIYKQFLEILQTYQRESKPIQDVYAQVTQLFHTAPDLLEDFK 573

Query: 106 TFLP 109
            FLP
Sbjct: 574 QFLP 577


>gi|402593955|gb|EJW87882.1| paired amphipathic helix repeat family protein [Wuchereria
           bancrofti]
          Length = 1137

 Score =  123 bits (308), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 99/348 (28%), Positives = 168/348 (48%), Gaps = 72/348 (20%)

Query: 348 MFSQELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGF 405
           +F  ++ + ++V+  L D+  ++ FLRCL LY + II++ EL  L+   +GR+  L+   
Sbjct: 317 LFFDKVCWLQEVRKALIDNGVHENFLRCLALYNQSIISKIELVELLTPFIGRFTLLL--- 373

Query: 406 NGFLARCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREK 465
                  +  +ELL              +P        D   D +++D  K R R+A+  
Sbjct: 374 -------KHVKELLG-------------LP--------DTHNDSQQNDD-KHRRRQAQMN 404

Query: 466 DRLDKSVAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSAS 525
           D ++                             ++D + C R   SYR LP++Y  P  S
Sbjct: 405 DDMELE--------------------------HKIDYATCRRLGVSYRSLPESYEKPLCS 438

Query: 526 QRTELGAEVLNDHWVSVTS-GSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTT 584
            RT L   VLND WVS     SED S  H +K Q+EE +FR ED+R+ELD+++E VN T 
Sbjct: 439 GRTPLCESVLNDSWVSFPCWSSEDSSAVHSKKTQFEEFVFRTEDERYELDIVIE-VNKTA 497

Query: 585 KRVEELLE----KINNNTIKTD--GPIRVEDHFTALNLRCIERLYGDHGLDVMDVLRKNA 638
             V E+++    ++ N  +K    GP  +     ++ LR ++R+YGDH L +++   K+ 
Sbjct: 498 LEVLEMVQRKMLRMKNEELKCFRLGP-SLGGSSNSIMLRALQRIYGDHTLKMLEGAMKSP 556

Query: 639 SLALPVILTRLKQKQEEW---ARCRSDFNKVWAEIYSKNYHKSLDHRS 683
            + +P ++ R++QK  EW   +R ++D   + A+     +    D R+
Sbjct: 557 QVMIPRLIERMRQKDVEWRKKSRTQNDLKLLRAKTIVSQFENLYDERA 604



 Score = 63.9 bits (154), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 26/44 (59%), Positives = 35/44 (79%)

Query: 73  MKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITL 116
           MKDFK+Q IDT GVI RV  LF+G  +LI+ FNTFLP G+++++
Sbjct: 1   MKDFKSQAIDTPGVIKRVSRLFRGRPNLIIAFNTFLPPGFDVSV 44



 Score = 43.1 bits (100), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 58/127 (45%), Gaps = 23/127 (18%)

Query: 110 KGYEITLPLEDEQPPPKKPVEF----------EEAINFVNKIKTRFQGDDHVYKSFLDIL 159
           +G E+T    D Q    +P  F          ++A+ + NK+  RF+    +Y  FL+IL
Sbjct: 121 QGNELTPVATDPQCSEIRPTTFLSSRVTTATYQDAVMYRNKVMARFEDRPEIYHKFLEIL 180

Query: 160 NMYRK--ENKSITEVY----QEVEALFQDHPDLLEEF-THFLPDSSGAASIHYVPSGRNS 212
               +  +   + + Y    + VE LF++  DL++EF   F P  SG +         +S
Sbjct: 181 QRLHRLTQEGGVIQGYKRALEAVEVLFENDTDLVQEFKQQFQPSCSGKSCTS------SS 234

Query: 213 ILRDRSS 219
            LRD +S
Sbjct: 235 TLRDTTS 241


>gi|159123637|gb|EDP48756.1| transcription factor (Sin3), putative [Aspergillus fumigatus A1163]
          Length = 1497

 Score =  122 bits (307), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 94/281 (33%), Positives = 140/281 (49%), Gaps = 25/281 (8%)

Query: 483 MSMYSSKDKYL-AKPIQE---LDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDH 538
           M +   +DK +  KP QE   ++LS+C    PSYRLLPK       S R +L   VLND 
Sbjct: 688 MHIDEPEDKVIETKPKQESGVVNLSHCRSLGPSYRLLPKRERQKPCSGRDQLCYSVLNDE 747

Query: 539 WVS-VTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKI--- 594
           W S  T  SED  F   RKNQ+E++L R E+DR + D  +E+   T + +E ++++    
Sbjct: 748 WASHPTWESEDSGFVAHRKNQFEDALHRIEEDRHDYDHHIEACTRTIQLIEPIVQQFLVM 807

Query: 595 -NNNTIKTDGPIRVEDHFTALNLRCIERLYG-DHGLDVMDVLRKNASLALPVILTRLKQK 652
                     P  +     A+  R I+++Y    G  ++  + +     LP++L RLKQK
Sbjct: 808 SEAERAAFKLPPGLGGQSEAIYQRVIKKVYDRQRGARIIREMFERPCHVLPIVLFRLKQK 867

Query: 653 QEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRK 712
            EEW   + +++KVW E   K Y +SLDH++   K  D K   AK +  EI+   E  R 
Sbjct: 868 CEEWKASQREWDKVWREQTQKAYWRSLDHQAIASKATDKKLFVAKHIQNEIQSKFEDAR- 926

Query: 713 EDDVLLAIAAGNRRS--IVPHLEFEYS--DPDIHEDLYQLI 749
                     G R+S   VP  +FE++  DP +  D  QL+
Sbjct: 927 ----------GLRKSGFKVPRHQFEFTFDDPAVIIDATQLL 957



 Score = 85.5 bits (210), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 47/99 (47%), Positives = 55/99 (55%), Gaps = 5/99 (5%)

Query: 25  PSGQTQVVGGGGG---GGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRI 81
           P GQ  +  G GG   G    L        +  VK  F D+ + Y+ FL++MKDFK+Q I
Sbjct: 137 PPGQPMMFNGSGGPIPGNVAALAQGQQP--ILNVKVRFVDQPDVYNRFLDIMKDFKSQAI 194

Query: 82  DTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLED 120
           DT GVI RV  LF GH  LI GFNTFLP GY I    ED
Sbjct: 195 DTPGVIQRVSTLFNGHPALIQGFNTFLPPGYRIECGTED 233



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 38/72 (52%), Positives = 50/72 (69%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           + PVEF  AI++VNKIK RF     +YK FL+IL  Y++E+K I +VY +V  LF   PD
Sbjct: 410 RGPVEFNHAISYVNKIKNRFASAPEIYKQFLEILQTYQRESKPIQDVYAQVTQLFNTAPD 469

Query: 186 LLEEFTHFLPDS 197
           LLE+F  FLP+S
Sbjct: 470 LLEDFKQFLPES 481



 Score = 46.6 bits (109), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 46/98 (46%), Gaps = 7/98 (7%)

Query: 20  SSRGEPSGQTQVVGGGGGGGAQ-------KLTTNDALAYLKAVKDIFQDKREKYDDFLEV 72
           S   +P      +G G   G+Q        +  N A++Y+  +K+ F    E Y  FLE+
Sbjct: 383 SGMNQPMNSLAGIGSGMLQGSQADLNKRGPVEFNHAISYVNKIKNRFASAPEIYKQFLEI 442

Query: 73  MKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPK 110
           ++ ++ +      V A+V +LF    DL+  F  FLP+
Sbjct: 443 LQTYQRESKPIQDVYAQVTQLFNTAPDLLEDFKQFLPE 480



 Score = 46.2 bits (108), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 42/96 (43%), Gaps = 13/96 (13%)

Query: 141 IKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLP----- 195
           +K RF     VY  FLDI+  ++ +      V Q V  LF  HP L++ F  FLP     
Sbjct: 168 VKVRFVDQPDVYNRFLDIMKDFKSQAIDTPGVIQRVSTLFNGHPALIQGFNTFLPPGYRI 227

Query: 196 -----DSSGAASIHYVPSGRNSI--LRDRSSAMPTA 224
                D+  A  +   PSG N++   R R S  P  
Sbjct: 228 ECGTEDNPDAIRV-TTPSGTNTLNMPRPRPSMDPAG 262


>gi|70983662|ref|XP_747358.1| transcription factor (Sin3) [Aspergillus fumigatus Af293]
 gi|66844984|gb|EAL85320.1| transcription factor (Sin3), putative [Aspergillus fumigatus Af293]
          Length = 1497

 Score =  122 bits (307), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 94/281 (33%), Positives = 140/281 (49%), Gaps = 25/281 (8%)

Query: 483 MSMYSSKDKYL-AKPIQE---LDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDH 538
           M +   +DK +  KP QE   ++LS+C    PSYRLLPK       S R +L   VLND 
Sbjct: 688 MHIDEPEDKVIETKPKQESGVVNLSHCRSLGPSYRLLPKRERQKPCSGRDQLCYSVLNDE 747

Query: 539 WVS-VTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKI--- 594
           W S  T  SED  F   RKNQ+E++L R E+DR + D  +E+   T + +E ++++    
Sbjct: 748 WASHPTWESEDSGFVAHRKNQFEDALHRIEEDRHDYDHHIEACTRTIQLIEPIVQQFLVM 807

Query: 595 -NNNTIKTDGPIRVEDHFTALNLRCIERLYG-DHGLDVMDVLRKNASLALPVILTRLKQK 652
                     P  +     A+  R I+++Y    G  ++  + +     LP++L RLKQK
Sbjct: 808 SEAERAAFKLPPGLGGQSEAIYQRVIKKVYDRQRGARIIREMFERPCHVLPIVLFRLKQK 867

Query: 653 QEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRK 712
            EEW   + +++KVW E   K Y +SLDH++   K  D K   AK +  EI+   E  R 
Sbjct: 868 CEEWKASQREWDKVWREQTQKAYWRSLDHQAIASKATDKKLFVAKHIQNEIQSKFEDAR- 926

Query: 713 EDDVLLAIAAGNRRS--IVPHLEFEYS--DPDIHEDLYQLI 749
                     G R+S   VP  +FE++  DP +  D  QL+
Sbjct: 927 ----------GLRKSGFKVPRHQFEFTFDDPAVIIDATQLL 957



 Score = 85.5 bits (210), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 47/99 (47%), Positives = 55/99 (55%), Gaps = 5/99 (5%)

Query: 25  PSGQTQVVGGGGG---GGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRI 81
           P GQ  +  G GG   G    L        +  VK  F D+ + Y+ FL++MKDFK+Q I
Sbjct: 137 PPGQPMMFNGSGGPIPGNVAALAQGQQP--ILNVKVRFVDQPDVYNRFLDIMKDFKSQAI 194

Query: 82  DTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLED 120
           DT GVI RV  LF GH  LI GFNTFLP GY I    ED
Sbjct: 195 DTPGVIQRVSTLFNGHPALIQGFNTFLPPGYRIECGTED 233



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 38/72 (52%), Positives = 50/72 (69%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           + PVEF  AI++VNKIK RF     +YK FL+IL  Y++E+K I +VY +V  LF   PD
Sbjct: 410 RGPVEFNHAISYVNKIKNRFASAPEIYKQFLEILQTYQRESKPIQDVYAQVTQLFNTAPD 469

Query: 186 LLEEFTHFLPDS 197
           LLE+F  FLP+S
Sbjct: 470 LLEDFKQFLPES 481



 Score = 46.6 bits (109), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 46/98 (46%), Gaps = 7/98 (7%)

Query: 20  SSRGEPSGQTQVVGGGGGGGAQ-------KLTTNDALAYLKAVKDIFQDKREKYDDFLEV 72
           S   +P      +G G   G+Q        +  N A++Y+  +K+ F    E Y  FLE+
Sbjct: 383 SGMNQPMNSLAGIGSGMLQGSQADLNKRGPVEFNHAISYVNKIKNRFASAPEIYKQFLEI 442

Query: 73  MKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPK 110
           ++ ++ +      V A+V +LF    DL+  F  FLP+
Sbjct: 443 LQTYQRESKPIQDVYAQVTQLFNTAPDLLEDFKQFLPE 480



 Score = 46.2 bits (108), Expect = 0.090,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 42/96 (43%), Gaps = 13/96 (13%)

Query: 141 IKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLP----- 195
           +K RF     VY  FLDI+  ++ +      V Q V  LF  HP L++ F  FLP     
Sbjct: 168 VKVRFVDQPDVYNRFLDIMKDFKSQAIDTPGVIQRVSTLFNGHPALIQGFNTFLPPGYRI 227

Query: 196 -----DSSGAASIHYVPSGRNSI--LRDRSSAMPTA 224
                D+  A  +   PSG N++   R R S  P  
Sbjct: 228 ECGTEDNPDAIRV-TTPSGTNTLNMPRPRPSMDPAG 262


>gi|145510638|ref|XP_001441252.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124408491|emb|CAK73855.1| unnamed protein product [Paramecium tetraurelia]
          Length = 872

 Score =  122 bits (306), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 70/220 (31%), Positives = 122/220 (55%), Gaps = 19/220 (8%)

Query: 493 LAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFK 552
           L KP+++ D +  +R T SY  +P  Y       +    +E+LN  WVSV  GSED SF 
Sbjct: 255 LFKPLKDTDFAQVDRVTRSYVRMPIGY------AKANNNSEILNHSWVSVPFGSEDQSFL 308

Query: 553 HMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFT 612
            MRKN +EE LF+ ED+RFE D+ ++ +  T   ++E+++         + PI +     
Sbjct: 309 IMRKNTFEEQLFKSEDERFEFDVNIQQIKRTINLLQEIIDG------NKEDPILIAK--- 359

Query: 613 ALNLRCIERLYGDHGLD---VMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNK-VWA 668
            +++R +++LY +   D   V+ + +   + +  +++ R+KQK  E    R++  K +W 
Sbjct: 360 VIDMRILQQLYRNQTQDQNEVLQIFQTKPAESAKILIKRVKQKLNELISARNNKAKQIWE 419

Query: 669 EIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISE 708
            +   N+H+SLDHRSFYFK+ D   +  +  + EI+E ++
Sbjct: 420 NVSLNNFHRSLDHRSFYFKKNDKLVINGQRFAREIEEYAK 459


>gi|119484636|ref|XP_001262097.1| sin3b [Neosartorya fischeri NRRL 181]
 gi|119410253|gb|EAW20200.1| sin3b [Neosartorya fischeri NRRL 181]
          Length = 1506

 Score =  122 bits (306), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 93/281 (33%), Positives = 140/281 (49%), Gaps = 25/281 (8%)

Query: 483 MSMYSSKDKYL-AKPIQE---LDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDH 538
           M +   +DK +  KP QE   ++LS+C    PSYRLLPK       S R +L   VLND 
Sbjct: 696 MHIDEPEDKVIETKPKQESGVVNLSHCRSLGPSYRLLPKRERQKPCSGRDQLCYSVLNDE 755

Query: 539 WVS-VTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKI--- 594
           W S  T  SED  F   RKNQ+E++L R E+DR + D  +E+   T + +E ++++    
Sbjct: 756 WASHPTWESEDSGFVAHRKNQFEDALHRIEEDRHDYDHHIEACTRTIQLIEPIVQQFLVM 815

Query: 595 -NNNTIKTDGPIRVEDHFTALNLRCIERLYG-DHGLDVMDVLRKNASLALPVILTRLKQK 652
                     P  +     A+  R I+++Y    G  ++  + +     LP++L RLKQK
Sbjct: 816 SEAERAAFKLPPGLGGQSEAIYQRVIKKVYDRQRGARIIREMFERPCHVLPIVLFRLKQK 875

Query: 653 QEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRK 712
            EEW   + +++KVW E   K Y +SLDH++   K  D K   AK +  EI+   E  R 
Sbjct: 876 CEEWKASQREWDKVWREQTQKAYWRSLDHQAIASKATDKKLFVAKHIQNEIQSKFEDAR- 934

Query: 713 EDDVLLAIAAGNRRS--IVPHLEFEYS--DPDIHEDLYQLI 749
                     G R+S   +P  +FE++  DP +  D  QL+
Sbjct: 935 ----------GLRKSGFQIPRHQFEFTFDDPAVIIDATQLL 965



 Score = 99.8 bits (247), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 52/105 (49%), Positives = 61/105 (58%), Gaps = 9/105 (8%)

Query: 25  PSGQTQVVGGGGG---------GGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKD 75
           P GQ  +  G GG            Q+   NDAL+YL  VK  F D+ + Y+ FL++MKD
Sbjct: 137 PPGQPMMFNGSGGPIPGNVAALAQGQQPILNDALSYLDQVKVRFVDQPDVYNRFLDIMKD 196

Query: 76  FKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLED 120
           FK+Q IDT GVI RV  LF GH  LI GFNTFLP GY I    ED
Sbjct: 197 FKSQAIDTPGVIQRVSTLFNGHPALIQGFNTFLPPGYRIECGTED 241



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 38/72 (52%), Positives = 50/72 (69%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           + PVEF  AI++VNKIK RF     +YK FL+IL  Y++E+K I +VY +V  LF   PD
Sbjct: 418 RGPVEFNHAISYVNKIKNRFASAPEIYKQFLEILQTYQRESKPIQDVYAQVTQLFNTAPD 477

Query: 186 LLEEFTHFLPDS 197
           LLE+F  FLP+S
Sbjct: 478 LLEDFKQFLPES 489



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 54/111 (48%), Gaps = 14/111 (12%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           ++P+   +A+++++++K RF     VY  FLDI+  ++ +      V Q V  LF  HP 
Sbjct: 162 QQPI-LNDALSYLDQVKVRFVDQPDVYNRFLDIMKDFKSQAIDTPGVIQRVSTLFNGHPA 220

Query: 186 LLEEFTHFLP----------DSSGAASIHYVPSGRNSI--LRDRSSAMPTA 224
           L++ F  FLP          D+  A  +   PSG N++   R R S  P  
Sbjct: 221 LIQGFNTFLPPGYRIECGTEDNPDAIRV-TTPSGTNTLNMPRPRPSIDPAG 270



 Score = 45.8 bits (107), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 45/98 (45%), Gaps = 7/98 (7%)

Query: 20  SSRGEPSGQTQVVGGGGGGGAQ-------KLTTNDALAYLKAVKDIFQDKREKYDDFLEV 72
           S   +P      +G G   G Q        +  N A++Y+  +K+ F    E Y  FLE+
Sbjct: 391 SGLNQPMNSLAGIGSGMLQGTQADLNKRGPVEFNHAISYVNKIKNRFASAPEIYKQFLEI 450

Query: 73  MKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPK 110
           ++ ++ +      V A+V +LF    DL+  F  FLP+
Sbjct: 451 LQTYQRESKPIQDVYAQVTQLFNTAPDLLEDFKQFLPE 488


>gi|453085659|gb|EMF13702.1| hypothetical protein SEPMUDRAFT_148918 [Mycosphaerella populorum
            SO2202]
          Length = 1551

 Score =  122 bits (306), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 84/257 (32%), Positives = 130/257 (50%), Gaps = 18/257 (7%)

Query: 502  LSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMRKNQYE 560
            LSNC    PSYRLLPK       S R EL   VLND W S  T  SED  F   RKN +E
Sbjct: 772  LSNCRGLGPSYRLLPKRERQKLCSGRDELCNAVLNDEWASHPTWASEDSGFIAHRKNVHE 831

Query: 561  ESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TALNL 616
            E L R E++R + D  +E+ + T + +E +  ++   +       ++ +        +  
Sbjct: 832  EGLHRIEEERHDYDFNIEAASRTIQLLEPIATQLRRRSDAEQRAYQLPEGLGGQSNTIYK 891

Query: 617  RCIERLYG-DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNY 675
            R I +LYG + G++V++ LR      +P++L R+K++ E W   + ++ KVW E   K +
Sbjct: 892  RVIYKLYGREKGIEVIENLRDRPYQVIPILLNRVKERLETWKMGQREWEKVWREQTQKMF 951

Query: 676  HKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRK---EDDVLLAIAAGNRRSIVPHL 732
             KSLDH++   K  D ++  +K L +EI    E+ R+    D +LL      R+   P L
Sbjct: 952  WKSLDHQAVQAKNVDRRAFQSKTLQSEIMVRYEEMRRAGFSDPILL------RK---PQL 1002

Query: 733  EFEYSDPDIHEDLYQLI 749
            E+   D D+  D   L+
Sbjct: 1003 EYTVDDEDVLADATHLV 1019



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 41/69 (59%), Positives = 49/69 (71%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFN 105
           NDAL+YL  VK  F D  + Y+ FL++MKDFK+  IDT GVI RV  LF G+ +LI GFN
Sbjct: 271 NDALSYLDQVKVQFADHPDVYNRFLDIMKDFKSGAIDTPGVIGRVSTLFAGNPELIQGFN 330

Query: 106 TFLPKGYEI 114
           TFLP GY I
Sbjct: 331 TFLPPGYRI 339



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 37/72 (51%), Positives = 50/72 (69%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           + PVEF  AI++VNKIK RF     +YK FL+IL  Y++E+K I +VY +V  LF+   D
Sbjct: 485 RGPVEFNHAISYVNKIKNRFSSQPDIYKQFLEILQTYQRESKPIQDVYSQVTHLFKGAKD 544

Query: 186 LLEEFTHFLPDS 197
           LLE+F  FLP+S
Sbjct: 545 LLEDFKQFLPES 556



 Score = 49.3 bits (116), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 4/96 (4%)

Query: 19  ISSRGEP----SGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMK 74
           IS R  P    S +   V   G      +  N A++Y+  +K+ F  + + Y  FLE+++
Sbjct: 460 ISPRATPLPMQSAEAIAVDASGMEKRGPVEFNHAISYVNKIKNRFSSQPDIYKQFLEILQ 519

Query: 75  DFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPK 110
            ++ +      V ++V  LFKG +DL+  F  FLP+
Sbjct: 520 TYQRESKPIQDVYSQVTHLFKGAKDLLEDFKQFLPE 555



 Score = 44.7 bits (104), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 19/65 (29%), Positives = 35/65 (53%)

Query: 131 FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEF 190
             +A+++++++K +F     VY  FLDI+  ++        V   V  LF  +P+L++ F
Sbjct: 270 LNDALSYLDQVKVQFADHPDVYNRFLDIMKDFKSGAIDTPGVIGRVSTLFAGNPELIQGF 329

Query: 191 THFLP 195
             FLP
Sbjct: 330 NTFLP 334


>gi|402086074|gb|EJT80972.1| hypothetical protein GGTG_00962 [Gaeumannomyces graminis var.
           tritici R3-111a-1]
          Length = 1484

 Score =  122 bits (306), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 89/299 (29%), Positives = 146/299 (48%), Gaps = 29/299 (9%)

Query: 496 PIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHM 554
           P   + LSNC    PSYRLLPK   +   S R EL   VLND W S  T  SED  F   
Sbjct: 713 PSGRVSLSNCRGYGPSYRLLPKRERLKPCSGRDELCNSVLNDEWASHPTWASEDSGFVAH 772

Query: 555 RKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDG--------PIR 606
           RKN +EE L R E++R + D  +E+     ++  +LLE I    +            P  
Sbjct: 773 RKNAFEEGLHRIEEERHDYDFFIEA----NQKCIQLLEPIAQQMLTLSPAERQNFRMPPG 828

Query: 607 VEDHFTALNLRCIERLYG-DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNK 665
           +    T++  R ++++YG + G +V++ + ++    +P+++ RLKQK EEW   + ++ K
Sbjct: 829 LGGQSTSIYKRVLKKVYGSEKGAEVVNDMFQHPFTVVPIVMARLKQKDEEWRFSQREWEK 888

Query: 666 VWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNR 725
           VW       + KSLDH+    K  D ++  AK L   IK   E++++     L I  G  
Sbjct: 889 VWQSQTKTMHLKSLDHQGIQVKSNDKRNFSAKHLVDLIKTKHEEQKR-----LRINKGK- 942

Query: 726 RSIVPHLEFEYS--DPDIHEDLYQ---LIKYSCGEMCTTEQLDKVMKIWTTFLEPMLGV 779
               P  ++ +S  D  +  DL +   L   + G+   +E+ D++++ + T +    G+
Sbjct: 943 ---APRYQYLWSFADQGVLLDLIRFMVLYAMNSGQHGASEK-DRILEFFETSIPQFFGI 997



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 49/86 (56%), Positives = 59/86 (68%)

Query: 35  GGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELF 94
           GG    Q+   NDAL+YL  VK  F +K + Y+ FL++MKDFK Q IDT GVI+RV ELF
Sbjct: 197 GGIAQGQQPILNDALSYLDQVKVQFHEKLDVYNMFLDIMKDFKCQSIDTPGVISRVSELF 256

Query: 95  KGHRDLILGFNTFLPKGYEITLPLED 120
            GH +LI GFNTFLP GY I   LE+
Sbjct: 257 AGHPNLIQGFNTFLPPGYRIECGLEN 282



 Score = 90.1 bits (222), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 40/76 (52%), Positives = 52/76 (68%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           + PVEF  AI++VNKIK RFQ    +YK FL+IL  Y++E K I +VY +V  LF   PD
Sbjct: 438 RGPVEFNHAISYVNKIKNRFQDKPEIYKQFLEILQTYQREQKPIQDVYAQVTTLFHTAPD 497

Query: 186 LLEEFTHFLPDSSGAA 201
           LLE+F  FLP+S+  A
Sbjct: 498 LLEDFKQFLPESAAQA 513



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 5/104 (4%)

Query: 12  SQIKRPMISSRGEPSGQTQVVGGGGGGGAQKLTT-----NDALAYLKAVKDIFQDKREKY 66
           S +   M  +   P+   Q  G  G  G Q  T      N A++Y+  +K+ FQDK E Y
Sbjct: 405 SSVPTQMARNAQTPTPAAQQSGLNGAAGQQAGTRGPVEFNHAISYVNKIKNRFQDKPEIY 464

Query: 67  DDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPK 110
             FLE+++ ++ ++     V A+V  LF    DL+  F  FLP+
Sbjct: 465 KQFLEILQTYQREQKPIQDVYAQVTTLFHTAPDLLEDFKQFLPE 508



 Score = 48.1 bits (113), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 21/70 (30%), Positives = 41/70 (58%), Gaps = 1/70 (1%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           ++P+   +A+++++++K +F     VY  FLDI+  ++ ++     V   V  LF  HP+
Sbjct: 203 QQPI-LNDALSYLDQVKVQFHEKLDVYNMFLDIMKDFKCQSIDTPGVISRVSELFAGHPN 261

Query: 186 LLEEFTHFLP 195
           L++ F  FLP
Sbjct: 262 LIQGFNTFLP 271


>gi|212545705|ref|XP_002153006.1| transcription factor (Sin3), putative [Talaromyces marneffei ATCC
            18224]
 gi|210064526|gb|EEA18621.1| transcription factor (Sin3), putative [Talaromyces marneffei ATCC
            18224]
          Length = 1594

 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 90/280 (32%), Positives = 141/280 (50%), Gaps = 23/280 (8%)

Query: 483  MSMYSSKDKYL-AKPIQE---LDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDH 538
            M +  S+D+ +  KP QE   ++L++C    PSYRLLPK       S R EL   VLND 
Sbjct: 778  MHIEESEDRVIDLKPKQETGIVNLAHCRSLGPSYRLLPKRERQKPCSGRDELCYSVLNDE 837

Query: 539  WVS-VTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNN 597
            W S  T  SED  F   RKNQ+E++L R E+DR + D  +E+   T + +E ++++    
Sbjct: 838  WASHPTWESEDSGFVAHRKNQFEDALHRIEEDRHDYDHHIEACVRTIQLIEPIVQQF--- 894

Query: 598  TIKTDG-------PIRVEDHFTALNLRCIERLYG-DHGLDVMDVLRKNASLALPVILTRL 649
             + ++        P  +     ++  R I+++Y    G  ++  + +     LPV+L RL
Sbjct: 895  LVMSEAERAAFVLPPGLGGQSESIYKRVIKKVYDRQRGELIIQQMFERPCHVLPVLLYRL 954

Query: 650  KQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEK 709
            KQK EEW   + +++KVW E   K + +SLDH++   K  D K   +K +  EI+   E+
Sbjct: 955  KQKCEEWKASQREWDKVWREQMQKCFWRSLDHQAITNKGMDKKLFSSKNIHNEIQAKYEE 1014

Query: 710  KRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLI 749
             R        I     +      EFE+SDP +  D  QL+
Sbjct: 1015 GRN-------IRKSGYQLPAHQFEFEFSDPAVIIDATQLL 1047



 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 46/90 (51%), Positives = 57/90 (63%), Gaps = 1/90 (1%)

Query: 26  SGQTQVVGGGGG-GGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTA 84
           +  TQ+ G        Q+   NDAL+YL  VK  F ++ + Y+ FL++MKDFK+Q IDT 
Sbjct: 230 AAPTQIPGNVAALAQGQQPILNDALSYLDQVKVRFVEQPDVYNRFLDIMKDFKSQAIDTP 289

Query: 85  GVIARVKELFKGHRDLILGFNTFLPKGYEI 114
           GVI RV  LF GH  LI GFNTFLP GY I
Sbjct: 290 GVIQRVSNLFTGHPALIQGFNTFLPPGYRI 319



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 39/75 (52%), Positives = 52/75 (69%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           + PVEF  AI++VNKIK RF     +YK FL+IL  Y++E+K I +VY +V  LF   PD
Sbjct: 500 RGPVEFNHAISYVNKIKNRFASAPEIYKQFLEILQTYQRESKPIQDVYAQVTQLFHTAPD 559

Query: 186 LLEEFTHFLPDSSGA 200
           LLE+F  FLPDS+ +
Sbjct: 560 LLEDFKQFLPDSAAS 574



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 57/125 (45%), Gaps = 19/125 (15%)

Query: 101 ILGFNTFLPKGY--EITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDI 158
           +LGFN   P      +    + +QP         +A+++++++K RF     VY  FLDI
Sbjct: 224 MLGFNGAAPTQIPGNVAALAQGQQP------ILNDALSYLDQVKVRFVEQPDVYNRFLDI 277

Query: 159 LNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLP----------DSSGAASIHYVPS 208
           +  ++ +      V Q V  LF  HP L++ F  FLP          D+  A  +   PS
Sbjct: 278 MKDFKSQAIDTPGVIQRVSNLFTGHPALIQGFNTFLPPGYRIECGTDDNPNAIRV-TTPS 336

Query: 209 GRNSI 213
           G N++
Sbjct: 337 GTNTL 341



 Score = 45.8 bits (107), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 21/64 (32%), Positives = 35/64 (54%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFN 105
           N A++Y+  +K+ F    E Y  FLE+++ ++ +      V A+V +LF    DL+  F 
Sbjct: 506 NHAISYVNKIKNRFASAPEIYKQFLEILQTYQRESKPIQDVYAQVTQLFHTAPDLLEDFK 565

Query: 106 TFLP 109
            FLP
Sbjct: 566 QFLP 569



 Score = 42.0 bits (97), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 3/77 (3%)

Query: 352 ELSFCEKVKDKL--RDDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFL 409
           E +F ++VK  +  +  + EFL+  +LY+ ++I R+ L       +G  P+LM  F  F+
Sbjct: 719 EFAFFDRVKKFIGNKQTFGEFLKLCNLYSNDLIDRNVLVKRAAGFIGSNPELMSWFKRFM 778

Query: 410 ARCEKSEELLADVMSKK 426
              E+SE+ + D+  K+
Sbjct: 779 -HIEESEDRVIDLKPKQ 794


>gi|449299103|gb|EMC95117.1| hypothetical protein BAUCODRAFT_35108 [Baudoinia compniacensis UAMH
           10762]
          Length = 1539

 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 78/229 (34%), Positives = 121/229 (52%), Gaps = 10/229 (4%)

Query: 496 PIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHM 554
           P   + LSNC    PSYRLLPK     + S R EL   VLND W S  T  SED  F   
Sbjct: 739 PSGRVSLSNCRGLGPSYRLLPKRERQKTCSGRDELCNSVLNDEWASHPTWASEDSGFIAH 798

Query: 555 RKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKI------NNNTIKTDGPIRVE 608
           RKN +EE L R E++R + D  +E+ + T + +E + +++      +    K   P  + 
Sbjct: 799 RKNVHEEGLHRIEEERHDYDYNIEACSRTIQLLEPIAQQLRRLSDADQRAFKL--PPGLG 856

Query: 609 DHFTALNLRCIERLYG-DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVW 667
                +  R I ++YG + G DV++ L  +    +PV+L RLK++ E W   + +++KVW
Sbjct: 857 GQSETIYKRIIMKIYGREKGHDVIEQLHVHPYQVIPVLLNRLKERLETWKYGQREWDKVW 916

Query: 668 AEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDV 716
            E   K + KSLDH++    + D K   AK L +EI+   E+ R ++++
Sbjct: 917 REQTQKMFWKSLDHQAVNNAKGDKKQFQAKFLQSEIQTKHEEMRAQENI 965



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 83/293 (28%), Positives = 134/293 (45%), Gaps = 33/293 (11%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           + PVEF  AI++VNKIK RF     +YK FL+IL  Y++E+K I +VY +V  LF+  PD
Sbjct: 457 RPPVEFNHAISYVNKIKNRFSSHPDIYKQFLEILQTYQRESKPIQDVYGQVTHLFKTAPD 516

Query: 186 LLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQ-----VHVDKKERAMAS-H 239
           LLE+F  FLP+S+  A      + R     + ++ M  AR        V  +E  M + H
Sbjct: 517 LLEDFKQFLPESAAQAKA----AERARQAAEENAMMSNARDGGLYGSPVISRETHMGTPH 572

Query: 240 ADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERRDDHRRERERDDRDFENDVNRDFSM 299
             R L      P  +       KD ++R  +         R+   D     + V    + 
Sbjct: 573 QGRQLP-----PVGNFAPTPMGKDNKKRKVE---------RQETVDSMAGISGVKAPLAG 618

Query: 300 QRFPHKRKSARKIEDSTAEPLHQGGEGDENFGMHPVSSSYDDKNAMKSMFSQELSFCEKV 359
           Q      K  ++   + A+P   G +   + G+ P            +  S+E+SF E+V
Sbjct: 619 Q----ASKRQKQTHTAVAKP---GDQPPSSPGLVPRLPEPLPPTTTAAATSEEMSFFERV 671

Query: 360 KDKL--RDDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLA 410
           K  +  +  + EFL+  +L+ +++I R+ +       +G +PDL   F  FL 
Sbjct: 672 KKAIGNKGTFSEFLKLCNLFNQDLIDRATVAFRAKSFIGNHPDLTKWFENFLG 724



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 41/69 (59%), Positives = 49/69 (71%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFN 105
           NDAL+YL  VK  F D  + Y+ FL++MKDFK+  IDT GVI RV  LF G+ +LI GFN
Sbjct: 249 NDALSYLDQVKVQFADHPDVYNRFLDIMKDFKSGAIDTPGVIGRVSTLFAGNPELIQGFN 308

Query: 106 TFLPKGYEI 114
           TFLP GY I
Sbjct: 309 TFLPPGYRI 317



 Score = 44.7 bits (104), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 19/65 (29%), Positives = 35/65 (53%)

Query: 131 FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEF 190
             +A+++++++K +F     VY  FLDI+  ++        V   V  LF  +P+L++ F
Sbjct: 248 LNDALSYLDQVKVQFADHPDVYNRFLDIMKDFKSGAIDTPGVIGRVSTLFAGNPELIQGF 307

Query: 191 THFLP 195
             FLP
Sbjct: 308 NTFLP 312



 Score = 44.3 bits (103), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 4/99 (4%)

Query: 16  RPMISSRGEP-SGQT---QVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLE 71
           R  +S R  P  GQ    Q+ G  G      +  N A++Y+  +K+ F    + Y  FLE
Sbjct: 429 RAGMSPRATPLPGQVTDGQLDGTAGMEKRPPVEFNHAISYVNKIKNRFSSHPDIYKQFLE 488

Query: 72  VMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPK 110
           +++ ++ +      V  +V  LFK   DL+  F  FLP+
Sbjct: 489 ILQTYQRESKPIQDVYGQVTHLFKTAPDLLEDFKQFLPE 527


>gi|189203277|ref|XP_001937974.1| paired amphipathic helix protein Sin3a [Pyrenophora tritici-repentis
            Pt-1C-BFP]
 gi|187985073|gb|EDU50561.1| paired amphipathic helix protein Sin3a [Pyrenophora tritici-repentis
            Pt-1C-BFP]
          Length = 1569

 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 79/219 (36%), Positives = 115/219 (52%), Gaps = 6/219 (2%)

Query: 500  LDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMRKNQ 558
            + LSNC    PSYRLLPK       S R EL   VLND W S  T  SED  F   RKN 
Sbjct: 803  VSLSNCRSLGPSYRLLPKRERERVCSGRDELCRSVLNDEWASHPTWASEDSGFVAHRKNT 862

Query: 559  YEESLFRCEDDRFELDMLLESVNVTTKRVE----ELLEKINNNTIKTDGPIRVEDHFTAL 614
            +EE L R E++R + D  +E+ + T +++E    +LL     + I    P  +      +
Sbjct: 863  FEEGLHRIEEERHDYDFNIEACSRTIQQLEPIANQLLAMKPEDRIGFTLPPGLGGQSETI 922

Query: 615  NLRCIERLYG-DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSK 673
              R I ++YG + G DV+  L       +PV+L RLK K E+W   + ++ KVW +   K
Sbjct: 923  YKRVIMKIYGRERGRDVIKELFAMPWSVVPVLLHRLKTKLEDWKAAQREWEKVWRDQTQK 982

Query: 674  NYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRK 712
             + KSLDH+S   KQ D +    K+L+ EI+   E++++
Sbjct: 983  IFWKSLDHQSITVKQADKRQFQPKSLTNEIQVRYEEQKR 1021



 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 44/82 (53%), Positives = 53/82 (64%)

Query: 33  GGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKE 92
           G    G  Q+   NDAL+YL  VK  F D  + Y+ FL++MKDFK+  IDT GVI RV  
Sbjct: 262 GSMAMGQGQQPILNDALSYLDQVKVQFADHPDVYNRFLDIMKDFKSGAIDTPGVIERVST 321

Query: 93  LFKGHRDLILGFNTFLPKGYEI 114
           LF G+  LI GFNTFLP GY+I
Sbjct: 322 LFAGNPALIQGFNTFLPPGYKI 343



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 38/74 (51%), Positives = 52/74 (70%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           + PVEF  AI++VNKIK RF     +YK+FL+IL  Y++E+K I +VY +V  LF   PD
Sbjct: 515 RGPVEFNHAISYVNKIKNRFAAHPDIYKNFLEILQTYQRESKPIQDVYAQVTHLFGGAPD 574

Query: 186 LLEEFTHFLPDSSG 199
           LLE+F  FLP+S+ 
Sbjct: 575 LLEDFKQFLPESAA 588



 Score = 48.9 bits (115), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)

Query: 36  GGGGAQK---LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKE 92
           GG  A+K   +  N A++Y+  +K+ F    + Y +FLE+++ ++ +      V A+V  
Sbjct: 508 GGAAAEKRGPVEFNHAISYVNKIKNRFAAHPDIYKNFLEILQTYQRESKPIQDVYAQVTH 567

Query: 93  LFKGHRDLILGFNTFLPK 110
           LF G  DL+  F  FLP+
Sbjct: 568 LFGGAPDLLEDFKQFLPE 585



 Score = 44.7 bits (104), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 20/70 (28%), Positives = 39/70 (55%), Gaps = 1/70 (1%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           ++P+   +A+++++++K +F     VY  FLDI+  ++        V + V  LF  +P 
Sbjct: 270 QQPI-LNDALSYLDQVKVQFADHPDVYNRFLDIMKDFKSGAIDTPGVIERVSTLFAGNPA 328

Query: 186 LLEEFTHFLP 195
           L++ F  FLP
Sbjct: 329 LIQGFNTFLP 338


>gi|330934809|ref|XP_003304717.1| hypothetical protein PTT_17366 [Pyrenophora teres f. teres 0-1]
 gi|311318599|gb|EFQ87218.1| hypothetical protein PTT_17366 [Pyrenophora teres f. teres 0-1]
          Length = 1599

 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/219 (36%), Positives = 115/219 (52%), Gaps = 6/219 (2%)

Query: 500  LDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMRKNQ 558
            + LSNC    PSYRLLPK       S R EL   VLND W S  T  SED  F   RKN 
Sbjct: 833  VSLSNCRSLGPSYRLLPKRERERLCSGRDELCRSVLNDEWASHPTWASEDSGFVAHRKNT 892

Query: 559  YEESLFRCEDDRFELDMLLESVNVTTKRVE----ELLEKINNNTIKTDGPIRVEDHFTAL 614
            +EE L R E++R + D  +E+ + T +++E    +LL     + I    P  +      +
Sbjct: 893  FEEGLHRIEEERHDYDFNIEACSRTIQQLEPIANQLLTMKPEDRIGFTLPPGLGGQSETI 952

Query: 615  NLRCIERLYG-DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSK 673
              R I ++YG + G DV+  L       +PV+L RLK K E+W   + ++ KVW +   K
Sbjct: 953  YKRVIMKIYGRERGRDVIKELFAMPWSVVPVLLHRLKTKLEDWKAAQREWEKVWRDQTQK 1012

Query: 674  NYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRK 712
             + KSLDH+S   KQ D +    K+L+ EI+   E++++
Sbjct: 1013 IFWKSLDHQSITVKQADKRQFQPKSLTNEIQVRYEEQKR 1051



 Score = 89.7 bits (221), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 44/82 (53%), Positives = 53/82 (64%)

Query: 33  GGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKE 92
           G    G  Q+   NDAL+YL  VK  F D  + Y+ FL++MKDFK+  IDT GVI RV  
Sbjct: 287 GSMAMGQGQQPILNDALSYLDQVKVQFADHPDVYNRFLDIMKDFKSGAIDTPGVIERVST 346

Query: 93  LFKGHRDLILGFNTFLPKGYEI 114
           LF G+  LI GFNTFLP GY+I
Sbjct: 347 LFAGNPALIQGFNTFLPPGYKI 368



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 38/74 (51%), Positives = 52/74 (70%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           + PVEF  AI++VNKIK RF     +YK+FL+IL  Y++E+K I +VY +V  LF   PD
Sbjct: 542 RGPVEFNHAISYVNKIKNRFAAHPDIYKNFLEILQTYQRESKPIQDVYAQVTHLFGGAPD 601

Query: 186 LLEEFTHFLPDSSG 199
           LLE+F  FLP+S+ 
Sbjct: 602 LLEDFKQFLPESAA 615



 Score = 47.8 bits (112), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)

Query: 36  GGGGAQK---LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKE 92
           GG  A+K   +  N A++Y+  +K+ F    + Y +FLE+++ ++ +      V A+V  
Sbjct: 535 GGAVAEKRGPVEFNHAISYVNKIKNRFAAHPDIYKNFLEILQTYQRESKPIQDVYAQVTH 594

Query: 93  LFKGHRDLILGFNTFLPK 110
           LF G  DL+  F  FLP+
Sbjct: 595 LFGGAPDLLEDFKQFLPE 612



 Score = 44.7 bits (104), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 20/70 (28%), Positives = 39/70 (55%), Gaps = 1/70 (1%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           ++P+   +A+++++++K +F     VY  FLDI+  ++        V + V  LF  +P 
Sbjct: 295 QQPI-LNDALSYLDQVKVQFADHPDVYNRFLDIMKDFKSGAIDTPGVIERVSTLFAGNPA 353

Query: 186 LLEEFTHFLP 195
           L++ F  FLP
Sbjct: 354 LIQGFNTFLP 363


>gi|15242194|ref|NP_197007.1| paired amphipathic helix repeat-containing protein [Arabidopsis
           thaliana]
 gi|9755670|emb|CAC01822.1| putative protein [Arabidopsis thaliana]
 gi|332004724|gb|AED92107.1| paired amphipathic helix repeat-containing protein [Arabidopsis
           thaliana]
          Length = 271

 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 65/110 (59%), Positives = 77/110 (70%), Gaps = 2/110 (1%)

Query: 12  SQIKRPMISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLE 71
           SQ + P+ S R E  GQ+   G G    A  LTT+DALAYLK +KD+F D++ KY  FLE
Sbjct: 163 SQNQHPVGSPRNELQGQSPKPGNGNTKDA--LTTDDALAYLKEIKDVFHDQKYKYHLFLE 220

Query: 72  VMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLEDE 121
           +M DFKAQR DT+ VIARVK+L KGH  LIL FN FLP G+EITL  EDE
Sbjct: 221 IMSDFKAQRTDTSVVIARVKDLLKGHNHLILVFNKFLPHGFEITLDDEDE 270



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 88/181 (48%), Gaps = 32/181 (17%)

Query: 43  LTTNDALAYLKAVKDIF--QDKREKYDDFLEVMKDFKAQRI-----DTAGVIARVKELFK 95
           +T +DA AYL+ VK+ F   D+R+KY  F +V+ DFKAQRI     D+A   + +K+L  
Sbjct: 82  MTISDARAYLQQVKNTFIDHDERDKYAMFRKVLFDFKAQRIVADRSDSARFCSHLKDL-- 139

Query: 96  GHRDLILGFNTFLPK---------GYEITLP-------LEDEQPPP-----KKPVEFEEA 134
              DL   F+  + +         G +   P       L+ + P P     K  +  ++A
Sbjct: 140 --SDLFQIFSERMKRIGDKEIDGSGSQNQHPVGSPRNELQGQSPKPGNGNTKDALTTDDA 197

Query: 135 INFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFL 194
           + ++ +IK  F    + Y  FL+I++ ++ +    + V   V+ L + H  L+  F  FL
Sbjct: 198 LAYLKEIKDVFHDQKYKYHLFLEIMSDFKAQRTDTSVVIARVKDLLKGHNHLILVFNKFL 257

Query: 195 P 195
           P
Sbjct: 258 P 258


>gi|334187691|ref|NP_001190312.1| paired amphipathic helix repeat-containing protein [Arabidopsis
           thaliana]
 gi|332004725|gb|AED92108.1| paired amphipathic helix repeat-containing protein [Arabidopsis
           thaliana]
          Length = 307

 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 65/110 (59%), Positives = 77/110 (70%), Gaps = 2/110 (1%)

Query: 12  SQIKRPMISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLE 71
           SQ + P+ S R E  GQ+   G G    A  LTT+DALAYLK +KD+F D++ KY  FLE
Sbjct: 199 SQNQHPVGSPRNELQGQSPKPGNGNTKDA--LTTDDALAYLKEIKDVFHDQKYKYHLFLE 256

Query: 72  VMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLEDE 121
           +M DFKAQR DT+ VIARVK+L KGH  LIL FN FLP G+EITL  EDE
Sbjct: 257 IMSDFKAQRTDTSVVIARVKDLLKGHNHLILVFNKFLPHGFEITLDDEDE 306



 Score = 60.1 bits (144), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 41/76 (53%), Positives = 56/76 (73%), Gaps = 2/76 (2%)

Query: 43  LTTNDALAYLKAVKDIF--QDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDL 100
           +T +DA AYL+ VK+ F   D+R+KY  F +V+ DFKAQRID + + AR+K+LFK H+ L
Sbjct: 52  MTISDARAYLQQVKNTFIDHDERDKYAMFRKVLFDFKAQRIDRSILYARLKKLFKKHKHL 111

Query: 101 ILGFNTFLPKGYEITL 116
           I+GFNTFL  G +I L
Sbjct: 112 IIGFNTFLSLGDKIFL 127


>gi|255931283|ref|XP_002557198.1| Pc12g03120 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211581817|emb|CAP79939.1| Pc12g03120 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 1510

 Score =  121 bits (303), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 84/259 (32%), Positives = 130/259 (50%), Gaps = 14/259 (5%)

Query: 500 LDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMRKNQ 558
           ++L++C    PSYRLLPK       S R  +   VLND W S  T  SED  F   RKNQ
Sbjct: 728 VNLAHCRSLGPSYRLLPKRERQKPCSGRDPMCNGVLNDDWASHPTWASEDSGFVAHRKNQ 787

Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKI----NNNTIKTDGPIRVEDHFTAL 614
           YE++L R E+DR + D  +E+   T + +E + ++     +   +    P  +     A+
Sbjct: 788 YEDALHRIEEDRHDYDHHIEACTRTIQLIEPICQQFLYMSDAERMAFKLPQGLGGQSEAI 847

Query: 615 NLRCIERLYG-DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSK 673
             R I+++Y    G  V+  +       LP++L RLKQK EEW  C+ +++KVW E   +
Sbjct: 848 YQRVIKKIYDRQRGEKVIRDMFLRPCHVLPIVLYRLKQKLEEWKACQREWDKVWREQMQR 907

Query: 674 NYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLE 733
            Y +SLDH++   KQ D K   AK +  +++       K +D      +G R  +    E
Sbjct: 908 AYWRSLDHQAIATKQTDKKLFVAKNIQQDLQT------KLEDAQAGRQSG-RTPLKYQAE 960

Query: 734 FEYSDPDIHED-LYQLIKY 751
           F++SD  +  D +Y L  Y
Sbjct: 961 FQFSDTQVLLDAVYLLFLY 979



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 52/115 (45%), Positives = 62/115 (53%), Gaps = 10/115 (8%)

Query: 16  RPMISSRGEPSGQTQVVGGGGG----------GGAQKLTTNDALAYLKAVKDIFQDKREK 65
           R  +   G P GQ  +     G             Q+   NDAL+YL  VK  F D+ + 
Sbjct: 229 RSYMQHPGGPPGQPMMAYNAAGQQIPGNVAALAQGQQPILNDALSYLDQVKVRFVDQPDV 288

Query: 66  YDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLED 120
           Y+ FL++MKDFK+Q IDT GVI RV  LF GH  LI GFNTFLP GY I    ED
Sbjct: 289 YNRFLDIMKDFKSQAIDTPGVIQRVSTLFNGHPALIQGFNTFLPPGYRIECGTED 343



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 39/76 (51%), Positives = 52/76 (68%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           + PVEF  AI++VNKIK RF     +YK FL+IL  Y++E+K I +VY +V  LF   PD
Sbjct: 442 RGPVEFNHAISYVNKIKNRFSSAPEIYKQFLEILQTYQRESKPIQDVYGQVTQLFNTAPD 501

Query: 186 LLEEFTHFLPDSSGAA 201
           LLE+F  FLP+S+  A
Sbjct: 502 LLEDFKQFLPESAAHA 517



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 12/103 (11%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           ++P+   +A+++++++K RF     VY  FLDI+  ++ +      V Q V  LF  HP 
Sbjct: 264 QQPI-LNDALSYLDQVKVRFVDQPDVYNRFLDIMKDFKSQAIDTPGVIQRVSTLFNGHPA 322

Query: 186 LLEEFTHFLP----------DSSGAASIHYVPSGRNSILRDRS 218
           L++ F  FLP          D+  A  +   PSG N++   R+
Sbjct: 323 LIQGFNTFLPPGYRIECGTEDNPDAIRV-TTPSGTNTLSMPRA 364



 Score = 47.4 bits (111), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 6/85 (7%)

Query: 32  VGGGGGGGAQKLTT------NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAG 85
           VG G   GAQ L        N A++Y+  +K+ F    E Y  FLE+++ ++ +      
Sbjct: 428 VGTGMLQGAQDLNKRGPVEFNHAISYVNKIKNRFSSAPEIYKQFLEILQTYQRESKPIQD 487

Query: 86  VIARVKELFKGHRDLILGFNTFLPK 110
           V  +V +LF    DL+  F  FLP+
Sbjct: 488 VYGQVTQLFNTAPDLLEDFKQFLPE 512


>gi|115401558|ref|XP_001216367.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
 gi|114190308|gb|EAU32008.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
          Length = 1611

 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 83/242 (34%), Positives = 127/242 (52%), Gaps = 16/242 (6%)

Query: 483  MSMYSSKDKYL-AKPIQE---LDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDH 538
            M +   +DK + +KP QE   ++LS+C    PSYRLLPK       S R +L   VLND 
Sbjct: 792  MHVEEPEDKIIESKPKQEPGVVNLSHCRSLGPSYRLLPKRERQKPCSGRDQLCYSVLNDE 851

Query: 539  WVS-VTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNN 597
            W S  T  SED  F   RKNQYE+SL R E+DR + D  +E+   T + +E ++++    
Sbjct: 852  WASHPTWASEDSGFVAHRKNQYEDSLHRIEEDRHDYDHHIEACTRTIQLIEPIVQQF--- 908

Query: 598  TIKTDG-------PIRVEDHFTALNLRCIERLYG-DHGLDVMDVLRKNASLALPVILTRL 649
             + ++        P  +     A+  R I+++Y    G  ++  + +     LP+IL RL
Sbjct: 909  LVMSEAERAAFKLPPGLGGQSEAIYQRVIKKIYDRQRGERIIREMFERPCHVLPIILFRL 968

Query: 650  KQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEK 709
            KQK EEW   + +++K+W E   K Y +SLDH++   K  D K   AK +  EI+   E+
Sbjct: 969  KQKCEEWKASQREWDKIWREQMQKAYWRSLDHQAIASKGVDKKLFVAKHIQNEIQNKFEE 1028

Query: 710  KR 711
             +
Sbjct: 1029 SK 1030



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 53/115 (46%), Positives = 63/115 (54%), Gaps = 10/115 (8%)

Query: 16  RPMISSRGEPSGQTQVVGGGGG----------GGAQKLTTNDALAYLKAVKDIFQDKREK 65
           R  +   G P GQ  +   G G             Q+   NDAL+YL  VK  F D+ + 
Sbjct: 229 RSYLQHPGGPPGQPMMGFNGSGPQMPGNVAALAQGQQPILNDALSYLDQVKVRFVDQPDV 288

Query: 66  YDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLED 120
           Y+ FL++MKDFK+Q IDT GVI RV  LF GH  LI GFNTFLP GY I    ED
Sbjct: 289 YNRFLDIMKDFKSQAIDTPGVIQRVSTLFNGHPALIQGFNTFLPPGYRIECGTED 343



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 38/72 (52%), Positives = 50/72 (69%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           + PVEF  AI++VNKIK RF     +YK FL+IL  Y++E+K I +VY +V  LF   PD
Sbjct: 516 RGPVEFNHAISYVNKIKNRFASAPEIYKQFLEILQTYQRESKPIQDVYAQVTQLFNTAPD 575

Query: 186 LLEEFTHFLPDS 197
           LLE+F  FLP+S
Sbjct: 576 LLEDFKQFLPES 587



 Score = 53.1 bits (126), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 58/123 (47%), Gaps = 16/123 (13%)

Query: 101 ILGFNTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILN 160
           ++GFN   P+       L   Q    +P+   +A+++++++K RF     VY  FLDI+ 
Sbjct: 243 MMGFNGSGPQMPGNVAALAQGQ----QPI-LNDALSYLDQVKVRFVDQPDVYNRFLDIMK 297

Query: 161 MYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLP----------DSSGAASIHYVPSGR 210
            ++ +      V Q V  LF  HP L++ F  FLP          D+  A  +   PSG 
Sbjct: 298 DFKSQAIDTPGVIQRVSTLFNGHPALIQGFNTFLPPGYRIECGTEDNPDAIRV-TTPSGT 356

Query: 211 NSI 213
           N+I
Sbjct: 357 NTI 359



 Score = 46.6 bits (109), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 7/94 (7%)

Query: 24  EPSGQTQVVGGGGGGGAQ-------KLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDF 76
           +P      VG G   G+Q        +  N A++Y+  +K+ F    E Y  FLE+++ +
Sbjct: 493 QPMNSLAGVGSGMLQGSQADLNKRGPVEFNHAISYVNKIKNRFASAPEIYKQFLEILQTY 552

Query: 77  KAQRIDTAGVIARVKELFKGHRDLILGFNTFLPK 110
           + +      V A+V +LF    DL+  F  FLP+
Sbjct: 553 QRESKPIQDVYAQVTQLFNTAPDLLEDFKQFLPE 586


>gi|425765792|gb|EKV04440.1| Transcription factor (Sin3), putative [Penicillium digitatum PHI26]
 gi|425783881|gb|EKV21698.1| Transcription factor (Sin3), putative [Penicillium digitatum Pd1]
          Length = 1481

 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 85/259 (32%), Positives = 130/259 (50%), Gaps = 14/259 (5%)

Query: 500 LDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMRKNQ 558
           ++L++C    PSYRLLPK       S R  L   VLND W S  T  SED  F   RKNQ
Sbjct: 690 VNLAHCRSLGPSYRLLPKRERQKPCSGRDPLCNGVLNDDWASHPTWASEDSGFVAHRKNQ 749

Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKI----NNNTIKTDGPIRVEDHFTAL 614
           YE++L R E+DR + D  +E+   T + +E + ++     +   +    P  +     A+
Sbjct: 750 YEDALHRIEEDRHDYDHHIEACTRTIQLIEPICQQFLYMSDAERMAFKLPQGLGGQSEAI 809

Query: 615 NLRCIERLYG-DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSK 673
             R I+++Y    G  V+  +       LP++L RLKQK EEW  C+ +++KVW E   +
Sbjct: 810 YQRVIKKIYDRQRGEKVIRDMFLRPCHVLPIVLYRLKQKLEEWKACQREWDKVWREQMQR 869

Query: 674 NYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLE 733
            Y +SLDH++   KQ D K   AK +  +++       K +D      +G R S     E
Sbjct: 870 AYWRSLDHQAIATKQTDKKLFVAKNIQQDLQT------KLEDAQAGRNSG-RTSPKSQAE 922

Query: 734 FEYSDPDIHED-LYQLIKY 751
           F+++D  +  D +Y L  Y
Sbjct: 923 FQFNDTQVLLDAVYLLFLY 941



 Score = 96.3 bits (238), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 52/115 (45%), Positives = 62/115 (53%), Gaps = 10/115 (8%)

Query: 16  RPMISSRGEPSGQTQVVGGGGG----------GGAQKLTTNDALAYLKAVKDIFQDKREK 65
           R  +   G P GQ  +     G             Q+   NDAL+YL  VK  F D+ + 
Sbjct: 119 RSYMQHPGGPPGQPMIAYNAAGQQIPGNVAALAQGQQPILNDALSYLDQVKVRFVDQPDV 178

Query: 66  YDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLED 120
           Y+ FL++MKDFK+Q IDT GVI RV  LF GH  LI GFNTFLP GY I    ED
Sbjct: 179 YNRFLDIMKDFKSQAIDTPGVIQRVSTLFNGHPALIQGFNTFLPPGYRIECGTED 233



 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 50/125 (40%), Positives = 68/125 (54%), Gaps = 17/125 (13%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           + PVEF  AI++VNKIK RF     +YK FL+IL  Y++E+K I +VY +V  LF   PD
Sbjct: 404 RGPVEFNHAISYVNKIKNRFSSAPEIYKQFLEILQTYQRESKPIQDVYGQVTQLFNTAPD 463

Query: 186 LLEEFTHFLPDSSGAA----------------SIHYVPSGRNSILRDRSSAMPTARQVHV 229
           LLE+F  FLP+S+  A                ++   P+G  S   +R   MP   Q +V
Sbjct: 464 LLEDFKQFLPESAAHAKQVAAQRQAEEQAPLSNLRGEPAGFTSQTPNRDVKMPPLGQFNV 523

Query: 230 -DKKE 233
            D KE
Sbjct: 524 KDPKE 528



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 12/103 (11%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           ++P+   +A+++++++K RF     VY  FLDI+  ++ +      V Q V  LF  HP 
Sbjct: 154 QQPI-LNDALSYLDQVKVRFVDQPDVYNRFLDIMKDFKSQAIDTPGVIQRVSTLFNGHPA 212

Query: 186 LLEEFTHFLP----------DSSGAASIHYVPSGRNSILRDRS 218
           L++ F  FLP          D+  A  +   PSG N++   R+
Sbjct: 213 LIQGFNTFLPPGYRIECGTEDNPDAIRV-TTPSGTNTLSMPRA 254



 Score = 49.3 bits (116), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 6/97 (6%)

Query: 20  SSRGEPSGQTQVVGGGGGGGAQKLTT------NDALAYLKAVKDIFQDKREKYDDFLEVM 73
           SS  +P      VG G   GAQ L        N A++Y+  +K+ F    E Y  FLE++
Sbjct: 378 SSLTQPMNNLAGVGTGMLQGAQDLNKRGPVEFNHAISYVNKIKNRFSSAPEIYKQFLEIL 437

Query: 74  KDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPK 110
           + ++ +      V  +V +LF    DL+  F  FLP+
Sbjct: 438 QTYQRESKPIQDVYGQVTQLFNTAPDLLEDFKQFLPE 474


>gi|317139607|ref|XP_001817634.2| hypothetical protein AOR_1_1030174 [Aspergillus oryzae RIB40]
 gi|391864803|gb|EIT74097.1| histone deacetylase complex, SIN3 component [Aspergillus oryzae
            3.042]
          Length = 1611

 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 82/242 (33%), Positives = 127/242 (52%), Gaps = 16/242 (6%)

Query: 483  MSMYSSKDKYL-AKPIQE---LDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDH 538
            M +   +DK + +KP QE   ++LS+C    PSYRLLPK       S R +L   VLND 
Sbjct: 804  MHVEEPEDKIVESKPKQEPGLVNLSHCRSLGPSYRLLPKRERQKPCSGRDQLCYSVLNDE 863

Query: 539  WVS-VTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNN 597
            W S  T  SED  F   RKNQYE++L R E+DR + D  +E+   T + +E ++++    
Sbjct: 864  WASHPTWASEDSGFVAHRKNQYEDALHRIEEDRHDYDHHIEACTRTIQLIEPIVQQF--- 920

Query: 598  TIKTDG-------PIRVEDHFTALNLRCIERLYGDH-GLDVMDVLRKNASLALPVILTRL 649
             + ++        P  +     A+  R I+++Y    G  ++  + +     LP++L RL
Sbjct: 921  LVMSEAERAAFKLPPGLGGQSEAIYQRVIKKIYDRQLGDKIIREMFERPCHVLPIVLFRL 980

Query: 650  KQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEK 709
            KQK EEW   + +++K+W E   K Y +SLDH++   K  D K   AK +  EI+   E+
Sbjct: 981  KQKCEEWKASQREWDKIWREQMQKAYWRSLDHQAIASKGTDKKLFVAKHIQNEIQNKFEE 1040

Query: 710  KR 711
             R
Sbjct: 1041 SR 1042



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 49/100 (49%), Positives = 58/100 (58%), Gaps = 10/100 (10%)

Query: 25  PSGQTQVVGGGGG----------GGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMK 74
           P GQ  +   G G             Q+   NDAL+YL  VK  F D+ + Y+ FL++MK
Sbjct: 242 PPGQPMMGFNGSGPQIPGNVAALAQGQQPILNDALSYLDQVKVRFVDQPDVYNRFLDIMK 301

Query: 75  DFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEI 114
           DFK+Q IDT GVI RV  LF GH  LI GFNTFLP GY I
Sbjct: 302 DFKSQAIDTPGVIQRVSTLFNGHPALIQGFNTFLPPGYRI 341



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 38/72 (52%), Positives = 50/72 (69%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           + PVEF  AI++VNKIK RF     +YK FL+IL  Y++E+K I +VY +V  LF   PD
Sbjct: 526 RGPVEFNHAISYVNKIKNRFASAPEIYKQFLEILQTYQRESKPIQDVYAQVTQLFNTAPD 585

Query: 186 LLEEFTHFLPDS 197
           LLE+F  FLP+S
Sbjct: 586 LLEDFKQFLPES 597



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 1/70 (1%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           ++P+   +A+++++++K RF     VY  FLDI+  ++ +      V Q V  LF  HP 
Sbjct: 268 QQPI-LNDALSYLDQVKVRFVDQPDVYNRFLDIMKDFKSQAIDTPGVIQRVSTLFNGHPA 326

Query: 186 LLEEFTHFLP 195
           L++ F  FLP
Sbjct: 327 LIQGFNTFLP 336



 Score = 46.2 bits (108), Expect = 0.086,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 36/65 (55%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFN 105
           N A++Y+  +K+ F    E Y  FLE+++ ++ +      V A+V +LF    DL+  F 
Sbjct: 532 NHAISYVNKIKNRFASAPEIYKQFLEILQTYQRESKPIQDVYAQVTQLFNTAPDLLEDFK 591

Query: 106 TFLPK 110
            FLP+
Sbjct: 592 QFLPE 596


>gi|238483035|ref|XP_002372756.1| transcription factor (Sin3), putative [Aspergillus flavus NRRL3357]
 gi|220700806|gb|EED57144.1| transcription factor (Sin3), putative [Aspergillus flavus NRRL3357]
          Length = 1590

 Score =  120 bits (301), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 82/242 (33%), Positives = 127/242 (52%), Gaps = 16/242 (6%)

Query: 483  MSMYSSKDKYL-AKPIQE---LDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDH 538
            M +   +DK + +KP QE   ++LS+C    PSYRLLPK       S R +L   VLND 
Sbjct: 783  MHVEEPEDKIVESKPKQEPGLVNLSHCRSLGPSYRLLPKRERQKPCSGRDQLCYSVLNDE 842

Query: 539  WVS-VTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNN 597
            W S  T  SED  F   RKNQYE++L R E+DR + D  +E+   T + +E ++++    
Sbjct: 843  WASHPTWASEDSGFVAHRKNQYEDALHRIEEDRHDYDHHIEACTRTIQLIEPIVQQF--- 899

Query: 598  TIKTDG-------PIRVEDHFTALNLRCIERLYGDH-GLDVMDVLRKNASLALPVILTRL 649
             + ++        P  +     A+  R I+++Y    G  ++  + +     LP++L RL
Sbjct: 900  LVMSEAERAAFKLPPGLGGQSEAIYQRVIKKIYDRQLGDKIIREMFERPCHVLPIVLFRL 959

Query: 650  KQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEK 709
            KQK EEW   + +++K+W E   K Y +SLDH++   K  D K   AK +  EI+   E+
Sbjct: 960  KQKCEEWKASQREWDKIWREQMQKAYWRSLDHQAIASKGTDKKLFVAKHIQNEIQNKFEE 1019

Query: 710  KR 711
             R
Sbjct: 1020 SR 1021



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 49/100 (49%), Positives = 58/100 (58%), Gaps = 10/100 (10%)

Query: 25  PSGQTQVVGGGGG----------GGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMK 74
           P GQ  +   G G             Q+   NDAL+YL  VK  F D+ + Y+ FL++MK
Sbjct: 221 PPGQPMMGFNGSGPQIPGNVAALAQGQQPILNDALSYLDQVKVRFVDQPDVYNRFLDIMK 280

Query: 75  DFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEI 114
           DFK+Q IDT GVI RV  LF GH  LI GFNTFLP GY I
Sbjct: 281 DFKSQAIDTPGVIQRVSTLFNGHPALIQGFNTFLPPGYRI 320



 Score = 85.5 bits (210), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 38/72 (52%), Positives = 50/72 (69%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           + PVEF  AI++VNKIK RF     +YK FL+IL  Y++E+K I +VY +V  LF   PD
Sbjct: 505 RGPVEFNHAISYVNKIKNRFASAPEIYKQFLEILQTYQRESKPIQDVYAQVTQLFNTAPD 564

Query: 186 LLEEFTHFLPDS 197
           LLE+F  FLP+S
Sbjct: 565 LLEDFKQFLPES 576



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 1/70 (1%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           ++P+   +A+++++++K RF     VY  FLDI+  ++ +      V Q V  LF  HP 
Sbjct: 247 QQPI-LNDALSYLDQVKVRFVDQPDVYNRFLDIMKDFKSQAIDTPGVIQRVSTLFNGHPA 305

Query: 186 LLEEFTHFLP 195
           L++ F  FLP
Sbjct: 306 LIQGFNTFLP 315



 Score = 46.2 bits (108), Expect = 0.096,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 36/65 (55%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFN 105
           N A++Y+  +K+ F    E Y  FLE+++ ++ +      V A+V +LF    DL+  F 
Sbjct: 511 NHAISYVNKIKNRFASAPEIYKQFLEILQTYQRESKPIQDVYAQVTQLFNTAPDLLEDFK 570

Query: 106 TFLPK 110
            FLP+
Sbjct: 571 QFLPE 575


>gi|83765489|dbj|BAE55632.1| unnamed protein product [Aspergillus oryzae RIB40]
          Length = 1525

 Score =  120 bits (301), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 82/242 (33%), Positives = 127/242 (52%), Gaps = 16/242 (6%)

Query: 483 MSMYSSKDKYL-AKPIQE---LDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDH 538
           M +   +DK + +KP QE   ++LS+C    PSYRLLPK       S R +L   VLND 
Sbjct: 718 MHVEEPEDKIVESKPKQEPGLVNLSHCRSLGPSYRLLPKRERQKPCSGRDQLCYSVLNDE 777

Query: 539 WVS-VTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNN 597
           W S  T  SED  F   RKNQYE++L R E+DR + D  +E+   T + +E ++++    
Sbjct: 778 WASHPTWASEDSGFVAHRKNQYEDALHRIEEDRHDYDHHIEACTRTIQLIEPIVQQF--- 834

Query: 598 TIKTDG-------PIRVEDHFTALNLRCIERLYGDH-GLDVMDVLRKNASLALPVILTRL 649
            + ++        P  +     A+  R I+++Y    G  ++  + +     LP++L RL
Sbjct: 835 LVMSEAERAAFKLPPGLGGQSEAIYQRVIKKIYDRQLGDKIIREMFERPCHVLPIVLFRL 894

Query: 650 KQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEK 709
           KQK EEW   + +++K+W E   K Y +SLDH++   K  D K   AK +  EI+   E+
Sbjct: 895 KQKCEEWKASQREWDKIWREQMQKAYWRSLDHQAIASKGTDKKLFVAKHIQNEIQNKFEE 954

Query: 710 KR 711
            R
Sbjct: 955 SR 956



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 49/100 (49%), Positives = 58/100 (58%), Gaps = 10/100 (10%)

Query: 25  PSGQTQVVGGGGG----------GGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMK 74
           P GQ  +   G G             Q+   NDAL+YL  VK  F D+ + Y+ FL++MK
Sbjct: 156 PPGQPMMGFNGSGPQIPGNVAALAQGQQPILNDALSYLDQVKVRFVDQPDVYNRFLDIMK 215

Query: 75  DFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEI 114
           DFK+Q IDT GVI RV  LF GH  LI GFNTFLP GY I
Sbjct: 216 DFKSQAIDTPGVIQRVSTLFNGHPALIQGFNTFLPPGYRI 255



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 38/72 (52%), Positives = 50/72 (69%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           + PVEF  AI++VNKIK RF     +YK FL+IL  Y++E+K I +VY +V  LF   PD
Sbjct: 440 RGPVEFNHAISYVNKIKNRFASAPEIYKQFLEILQTYQRESKPIQDVYAQVTQLFNTAPD 499

Query: 186 LLEEFTHFLPDS 197
           LLE+F  FLP+S
Sbjct: 500 LLEDFKQFLPES 511



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 1/70 (1%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           ++P+   +A+++++++K RF     VY  FLDI+  ++ +      V Q V  LF  HP 
Sbjct: 182 QQPI-LNDALSYLDQVKVRFVDQPDVYNRFLDIMKDFKSQAIDTPGVIQRVSTLFNGHPA 240

Query: 186 LLEEFTHFLP 195
           L++ F  FLP
Sbjct: 241 LIQGFNTFLP 250



 Score = 46.2 bits (108), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 36/65 (55%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFN 105
           N A++Y+  +K+ F    E Y  FLE+++ ++ +      V A+V +LF    DL+  F 
Sbjct: 446 NHAISYVNKIKNRFASAPEIYKQFLEILQTYQRESKPIQDVYAQVTQLFNTAPDLLEDFK 505

Query: 106 TFLPK 110
            FLP+
Sbjct: 506 QFLPE 510


>gi|406865402|gb|EKD18444.1| hypothetical protein MBM_03437 [Marssonina brunnea f. sp.
            'multigermtubi' MB_m1]
          Length = 1557

 Score =  120 bits (300), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 88/266 (33%), Positives = 125/266 (46%), Gaps = 22/266 (8%)

Query: 524  ASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNV 582
             S R E+  EVLND W S  T  SED  F   RKN YEE L R E++R + D  +E    
Sbjct: 804  CSGRDEMCREVLNDDWASHPTWASEDSGFVAHRKNVYEEGLHRIEEERHDYDFNIE---- 859

Query: 583  TTKRVEELLEKINNNTIKTD--------GPIRVEDHFTALNLRCIERLYGDHGLDVMDVL 634
            T  +V  LLE I       D         PI +     A+  R  +++YG+ G +V+  L
Sbjct: 860  TNAKVISLLEPIAQTLTIMDLESRADFRMPIGLGGFSQAIYKRVFKKIYGERGPEVVADL 919

Query: 635  RKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSL 694
             K+    LP++L RLKQK EEW   + ++ KVWA   S  Y KSLDH     KQ D K+ 
Sbjct: 920  FKDPCAVLPIVLARLKQKDEEWRFTQREWEKVWAAQTSNMYLKSLDHMGIQAKQADKKNF 979

Query: 695  GAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQ--LIKYS 752
             AK L   IK   E++R++        A   +     L F++ D  +  D+ +  LI  +
Sbjct: 980  AAKHLVDVIKTKYEEQRRQ-------RATTGKKATFQLSFQFKDRAVVLDVLRIMLIYTA 1032

Query: 753  CGEMCTTEQLDKVMKIWTTFLEPMLG 778
                  T +  ++   + TF+    G
Sbjct: 1033 NASQHNTNERLRIQNFFETFVRIFFG 1058



 Score =  102 bits (255), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 51/98 (52%), Positives = 62/98 (63%), Gaps = 5/98 (5%)

Query: 17  PMISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDF 76
           P+      P G  Q+     G G Q+   NDAL+YL  VK  F D+ + Y+ FL++MKDF
Sbjct: 193 PIPQGHAIPGGAPQI-----GQGGQQPILNDALSYLDQVKVQFADQPDVYNRFLDIMKDF 247

Query: 77  KAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEI 114
           K+Q IDT GVI RV ELF GH +LI GFNTFLP GY I
Sbjct: 248 KSQAIDTPGVINRVSELFAGHPNLIQGFNTFLPPGYRI 285



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 39/72 (54%), Positives = 51/72 (70%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           + PVEF  AI++VNKIK RFQ    +YK FL+IL  Y++E+K I +VY +V  LF   PD
Sbjct: 434 RGPVEFNHAISYVNKIKNRFQDRPEIYKQFLEILQTYQRESKPIQDVYAQVTTLFNTAPD 493

Query: 186 LLEEFTHFLPDS 197
           LLE+F  FLP+S
Sbjct: 494 LLEDFKQFLPES 505



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 55/110 (50%), Gaps = 11/110 (10%)

Query: 12  SQIKRPMISSRGEPSGQTQVVGGGG----GGGAQ-------KLTTNDALAYLKAVKDIFQ 60
           SQ+   + S+ G+P   TQ    GG      GAQ        +  N A++Y+  +K+ FQ
Sbjct: 395 SQLTNAVASTLGQPPRNTQTPTPGGQPGMNNGAQAGLEKRGPVEFNHAISYVNKIKNRFQ 454

Query: 61  DKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPK 110
           D+ E Y  FLE+++ ++ +      V A+V  LF    DL+  F  FLP+
Sbjct: 455 DRPEIYKQFLEILQTYQRESKPIQDVYAQVTTLFNTAPDLLEDFKQFLPE 504



 Score = 49.3 bits (116), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 21/70 (30%), Positives = 40/70 (57%), Gaps = 1/70 (1%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           ++P+   +A+++++++K +F     VY  FLDI+  ++ +      V   V  LF  HP+
Sbjct: 212 QQPI-LNDALSYLDQVKVQFADQPDVYNRFLDIMKDFKSQAIDTPGVINRVSELFAGHPN 270

Query: 186 LLEEFTHFLP 195
           L++ F  FLP
Sbjct: 271 LIQGFNTFLP 280


>gi|281210799|gb|EFA84965.1| paired amphipathic helix containing protein [Polysphondylium
           pallidum PN500]
          Length = 1185

 Score =  120 bits (300), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 65/133 (48%), Positives = 86/133 (64%), Gaps = 9/133 (6%)

Query: 493 LAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFK 552
           +A+P  + D + C+R  PSYR LPKNY IP  + RTEL A VLND WVS  +GSEDY FK
Sbjct: 620 IAQP--DTDFTTCKRLGPSYRALPKNYPIPKCTGRTELSASVLNDVWVSFPTGSEDYGFK 677

Query: 553 HMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFT 612
             RKNQ+EE L++CED+RFELD+++E +N +T RV   L+ +  + I  +   R      
Sbjct: 678 SQRKNQFEEILYKCEDERFELDLVIE-LNASTIRV---LDPLYKSLIDLNESERQHFRLP 733

Query: 613 ALNL---RCIERL 622
            LN+   R IERL
Sbjct: 734 TLNVLHHRSIERL 746



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 46/91 (50%), Positives = 59/91 (64%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFN 105
           ++A  +L+ VK  F  + + Y+ FL++MKD KA  IDT GVI RV ELFKGHR LILGFN
Sbjct: 122 DNAFQFLEQVKLQFSKQPKIYNQFLDIMKDLKAHNIDTPGVIQRVTELFKGHRHLILGFN 181

Query: 106 TFLPKGYEITLPLEDEQPPPKKPVEFEEAIN 136
           TFLP GY I +  +D  P    P   ++ IN
Sbjct: 182 TFLPPGYRIEMADDDRPPSFSVPSPTQQQIN 212



 Score = 66.6 bits (161), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 32/73 (43%), Positives = 45/73 (61%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           +K  + + A  +V KIK RF+    VYK FL++L  Y+  +  I EVY +V  LF+ H D
Sbjct: 302 RKQNDLDHARKYVKKIKDRFESQPMVYKQFLNVLQKYQHGDHQIREVYDQVSELFKSHSD 361

Query: 186 LLEEFTHFLPDSS 198
           LL EF  FLPD++
Sbjct: 362 LLAEFVQFLPDNT 374



 Score = 47.4 bits (111), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 35/71 (49%)

Query: 125 PKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHP 184
           P +  +F+ A  F+ ++K +F     +Y  FLDI+   +  N     V Q V  LF+ H 
Sbjct: 115 PLRQAQFDNAFQFLEQVKLQFSKQPKIYNQFLDIMKDLKAHNIDTPGVIQRVTELFKGHR 174

Query: 185 DLLEEFTHFLP 195
            L+  F  FLP
Sbjct: 175 HLILGFNTFLP 185



 Score = 43.5 bits (101), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 23/62 (37%), Positives = 33/62 (53%)

Query: 48  ALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTF 107
           A  Y+K +KD F+ +   Y  FL V++ ++        V  +V ELFK H DL+  F  F
Sbjct: 310 ARKYVKKIKDRFESQPMVYKQFLNVLQKYQHGDHQIREVYDQVSELFKSHSDLLAEFVQF 369

Query: 108 LP 109
           LP
Sbjct: 370 LP 371


>gi|169603355|ref|XP_001795099.1| hypothetical protein SNOG_04686 [Phaeosphaeria nodorum SN15]
 gi|160706376|gb|EAT88446.2| hypothetical protein SNOG_04686 [Phaeosphaeria nodorum SN15]
          Length = 1549

 Score =  119 bits (298), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 96/332 (28%), Positives = 155/332 (46%), Gaps = 33/332 (9%)

Query: 500  LDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMRKNQ 558
            + LSNC    PSYRLLPK       S R EL   VLND W S  T  SED  F   RKN 
Sbjct: 789  VSLSNCRSLGPSYRLLPKRERERLCSGRDELCKSVLNDEWASHPTWASEDSGFVAHRKNT 848

Query: 559  YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFT------ 612
            +EE+L R E++R + D  +E+   T +++E +  ++   T+K +       HFT      
Sbjct: 849  FEEALHRIEEERHDYDFNIEACAKTIQQLEPIASQLL--TMKPED----RQHFTLPPGLG 902

Query: 613  ----ALNLRCIERLYG-DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVW 667
                 +  R I ++YG + G DV+  +       +PV+L RLK K E+W   + ++ KVW
Sbjct: 903  GQSETIYKRVIMKIYGREKGRDVIKEMFNIPWNVVPVLLHRLKCKLEDWKAAQREWEKVW 962

Query: 668  AEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRS 727
             +   K + KSLDH+S   K  D +    K+L  EI ++  +++K    +  ++  + + 
Sbjct: 963  RDQTQKMFWKSLDHQSITVKTTDKRQFQPKSLQNEI-QVRYEEQKRMQTIQEVSQPDYQF 1021

Query: 728  IVPHLEFEYSDPDIHEDLYQLIKYSCGEMCTTEQLDKVMKIWTTFLEPMLGVPSRPQGAE 787
            +     F + D D+  D+ +L+  S  +  T     K +     F+    G+        
Sbjct: 1022 L-----FSFKDEDVLIDVARLM-VSFADSNTGSDFSKTIPFVKEFVPLFFGI-------- 1067

Query: 788  DTEDVVKAKSHTVKSRAASVGDSDGSPDGDAA 819
            D +   +    + ++     GD   SPD DA+
Sbjct: 1068 DVQKFEQRVHMSGQNTPNDSGDDTPSPDDDAS 1099



 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 44/79 (55%), Positives = 54/79 (68%)

Query: 36  GGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFK 95
           G G  Q+   NDAL+YL  VK  F D  + Y+ FL++MKDFK+  IDT GVI RV  LF 
Sbjct: 245 GMGQGQQPILNDALSYLDQVKVQFADHPDVYNRFLDIMKDFKSGAIDTPGVIERVSTLFA 304

Query: 96  GHRDLILGFNTFLPKGYEI 114
           G+ +LI GFNTFLP GY+I
Sbjct: 305 GNPNLIQGFNTFLPPGYKI 323



 Score = 85.5 bits (210), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 38/72 (52%), Positives = 50/72 (69%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           + PVEF  AI++VNKIK RF     +YK FL+IL  Y++E+K I +VY +V  LF   PD
Sbjct: 498 RGPVEFNHAISYVNKIKNRFASQPDIYKQFLEILQTYQRESKPIQDVYAQVTTLFGGAPD 557

Query: 186 LLEEFTHFLPDS 197
           LLE+F  FLP+S
Sbjct: 558 LLEDFKQFLPES 569



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 3/78 (3%)

Query: 36  GGGGAQK---LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKE 92
           GG GA+K   +  N A++Y+  +K+ F  + + Y  FLE+++ ++ +      V A+V  
Sbjct: 491 GGVGAEKRGPVEFNHAISYVNKIKNRFASQPDIYKQFLEILQTYQRESKPIQDVYAQVTT 550

Query: 93  LFKGHRDLILGFNTFLPK 110
           LF G  DL+  F  FLP+
Sbjct: 551 LFGGAPDLLEDFKQFLPE 568



 Score = 45.4 bits (106), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 20/70 (28%), Positives = 40/70 (57%), Gaps = 1/70 (1%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           ++P+   +A+++++++K +F     VY  FLDI+  ++        V + V  LF  +P+
Sbjct: 250 QQPI-LNDALSYLDQVKVQFADHPDVYNRFLDIMKDFKSGAIDTPGVIERVSTLFAGNPN 308

Query: 186 LLEEFTHFLP 195
           L++ F  FLP
Sbjct: 309 LIQGFNTFLP 318


>gi|242209208|ref|XP_002470452.1| predicted protein [Postia placenta Mad-698-R]
 gi|220730485|gb|EED84341.1| predicted protein [Postia placenta Mad-698-R]
          Length = 1079

 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 77/242 (31%), Positives = 131/242 (54%), Gaps = 17/242 (7%)

Query: 511 SYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMRKNQYEESLFRCEDD 569
           SYR LP + +    S R +L   VLND W S  T  +ED  F+  +KN YEE+L R E++
Sbjct: 433 SYRKLPADEIGVPCSGRDDLCYSVLNDEWASQPTFATEDTVFQAHKKNVYEEALHRSEEE 492

Query: 570 RFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TALNLRCIERLYGD 625
           R E D  + ++  T + +E L  K+   +       R++ +       ++LR +++LYG 
Sbjct: 493 RHEYDFYIFALERTIQLLETLNTKLGQLSSIARRDFRLQPNLDGYGKGIHLRVLKKLYGS 552

Query: 626 H-GLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSF 684
             G  V   L K  + A+P +L RLK K  EW R ++ ++K+W E+ ++NYHKSLDH++ 
Sbjct: 553 SAGQAVYQELHKRPADAIPPVLERLKPKLMEWRRAQTAWDKIWRELDAQNYHKSLDHQAI 612

Query: 685 YFKQQDSKSLGAKALSAEI-----KEISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDP 739
            FK  + K+L A++L ++I     ++++  +R       + +   R  + P  + EY+  
Sbjct: 613 SFKVVEKKALTARSLVSQIEAANDEQVAAWRRA------STSGSQRGGLKPQYQLEYAMD 666

Query: 740 DI 741
           D+
Sbjct: 667 DL 668



 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 60/118 (50%), Gaps = 6/118 (5%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
           L   DAL +L  VK   Q   + Y  F+++++D K++ + T  VI  V  LFKGH +LI 
Sbjct: 15  LEVTDALDFLSLVKVALQGTPDAYKRFVKLLRDCKSRSVGTEAVIENVSTLFKGHPNLIQ 74

Query: 103 GFNTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILN 160
           GFN FLP+GY++   ++        P       + + +I       D  Y + LD+L+
Sbjct: 75  GFNIFLPEGYQMGCTVDGLTITVTTPT------SVITRIAKGNTTLDRAYNTTLDVLH 126



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/71 (30%), Positives = 41/71 (57%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           ++P+E  +A++F++ +K   QG    YK F+ +L   +  +     V + V  LF+ HP+
Sbjct: 12  QRPLEVTDALDFLSLVKVALQGTPDAYKRFVKLLRDCKSRSVGTEAVIENVSTLFKGHPN 71

Query: 186 LLEEFTHFLPD 196
           L++ F  FLP+
Sbjct: 72  LIQGFNIFLPE 82


>gi|403353006|gb|EJY76035.1| Transcriptional regulatory protein SIN3, putative [Oxytricha
           trifallax]
          Length = 1192

 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 69/222 (31%), Positives = 124/222 (55%), Gaps = 9/222 (4%)

Query: 493 LAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQR------TELGAEVLNDHWVSVTSGS 546
           L KP  E +     + + SY  +P ++  P    R       +L  ++ N+ + S+  GS
Sbjct: 359 LCKPFSEFETHFFRKVSYSYFEMPVDFPRPLCKGRFIYPEIKQLCKDIFNEDYSSLPQGS 418

Query: 547 EDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIR 606
           E + FK   KNQYE++LFR EDD +++D  + +++ T K ++E   KI + ++     ++
Sbjct: 419 ESFKFK--TKNQYEDALFRVEDDMYKMDFEIGNIHKTMKVLQEEKAKIEDMSLSEKEQLK 476

Query: 607 V-EDHFTALNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNK 665
           + E  F  L L+ IE++YG+ G +++ +L  N + A+P+I  R +   +++   + D+ +
Sbjct: 477 LDEKKFNKLRLKQIEKIYGELGQEMLRLLPMNPARAIPIIYDRFRNSYDKYVDEKRDYLR 536

Query: 666 VWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEIS 707
            W +   KN+ KSLDHRSF+FK  + K+  +K    EIK +S
Sbjct: 537 QWRDTCEKNFQKSLDHRSFHFKSFEKKNQSSKNYLLEIKNLS 578


>gi|242221093|ref|XP_002476302.1| predicted protein [Postia placenta Mad-698-R]
 gi|220724462|gb|EED78503.1| predicted protein [Postia placenta Mad-698-R]
          Length = 958

 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 81/249 (32%), Positives = 133/249 (53%), Gaps = 31/249 (12%)

Query: 511 SYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMRKNQYEESLFRCEDD 569
           SYR LP + +    S R +L   VLND W S  T  +ED  F+  +KN YEE+L R E++
Sbjct: 433 SYRKLPADEIGVPCSGRDDLCYSVLNDEWASQPTFATEDTVFQAHKKNVYEEALHRSEEE 492

Query: 570 RFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIR--------VEDHFTALNLRCIER 621
           R E D  + ++    +R  +LLE +N    +     R        V+ +   ++LR +++
Sbjct: 493 RHEYDFYIFAL----ERTIQLLETLNTKLGQLSSIARRDFRLQPNVDGYGKGIHLRVLKK 548

Query: 622 LYGDH-GLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLD 680
           LYG   G  V   L K  + A+P +L RLK K  EW R ++ ++K+W E+ ++NYHKSLD
Sbjct: 549 LYGSSAGQAVYQELHKRPADAIPPVLERLKPKLMEWRRAQTAWDKIWRELDAQNYHKSLD 608

Query: 681 HRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRS--------IVPHL 732
           H++  FK  + K+L A++L ++I+  ++++         +AA  R S        + P  
Sbjct: 609 HQAISFKVVEKKALTARSLVSQIEAANDEQ---------VAAWRRASTSESQRGGLKPQY 659

Query: 733 EFEYSDPDI 741
           + EY+  D+
Sbjct: 660 QLEYAMDDL 668



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 44/117 (37%), Positives = 59/117 (50%), Gaps = 6/117 (5%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
           L   DAL +L  VK   Q   + Y  F++++KDFK++ + T  VI  V  LFKGH +LI 
Sbjct: 15  LKVTDALVFLSLVKVALQGTPDAYKRFVKLLKDFKSRSVGTEAVIENVSTLFKGHPNLIQ 74

Query: 103 GFNTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDIL 159
           GFN FLP+GY+I   ++        P      I    K  T     DH Y   LD+L
Sbjct: 75  GFNIFLPEGYQIGCTVDGLTITVTTPT---SVITRTAKGNTTL---DHAYNPTLDVL 125



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 21/71 (29%), Positives = 41/71 (57%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           ++P++  +A+ F++ +K   QG    YK F+ +L  ++  +     V + V  LF+ HP+
Sbjct: 12  RRPLKVTDALVFLSLVKVALQGTPDAYKRFVKLLKDFKSRSVGTEAVIENVSTLFKGHPN 71

Query: 186 LLEEFTHFLPD 196
           L++ F  FLP+
Sbjct: 72  LIQGFNIFLPE 82


>gi|389742263|gb|EIM83450.1| hypothetical protein STEHIDRAFT_123872 [Stereum hirsutum FP-91666
           SS1]
          Length = 1273

 Score =  117 bits (294), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 84/289 (29%), Positives = 141/289 (48%), Gaps = 24/289 (8%)

Query: 510 PSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMRKNQYEESLFRCED 568
           PSYR LP++    + S R++LG  VLND WVS  T  SE+  F   +KN +E+ + + ED
Sbjct: 554 PSYRRLPESEARLATSGRSQLGRSVLNDEWVSHPTWASEEAGFVAHKKNIFEDLIHKTED 613

Query: 569 DRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TALNLRCIERLYG 624
           +R E  + LE +  T   +E L  +I   + +     ++         A+  R ++++Y 
Sbjct: 614 ERHEYQIHLEGMARTIAILEPLNARIEELSAEERATFKLPPDLGGQSKAIYQRTLKKVYN 673

Query: 625 -DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRS 683
            D G  +   L  N   A+PV+L RLKQK E+W R + ++   W ++  KN++KSLDH  
Sbjct: 674 KDQGAVMYQALLDNPIAAVPVVLARLKQKNEDWKRAQREWGIFWRQMEVKNFYKSLDHIG 733

Query: 684 FYFKQQDSKSLGAKALSAEIKEI---------SEKKRKEDDVLLAIAAGNRRSIVPHLEF 734
             FK  D K++ AK+   EI+ +         S K+RK          G      P L +
Sbjct: 734 INFKANDKKNITAKSFVTEIETLRKEALESGESFKERKTMPACAIWPPG------PQLTY 787

Query: 735 EYSDPDI-HEDLYQLIKY--SCGEMCTTEQLDKVMKIWTTFLEPMLGVP 780
            + D ++ H+ L  +  Y     ++ + ++   V +   +F+  +  VP
Sbjct: 788 GFEDTEVLHDSLKMVYSYLDHNPQVYSLQERRSVERFLRSFVPTLFMVP 836



 Score = 92.8 bits (229), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 44/72 (61%), Positives = 51/72 (70%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
           L   DAL+YL AVK  FQD+ + Y+ FL++MKDFK Q IDT GVI RV  LF G+  LI 
Sbjct: 26  LNVTDALSYLDAVKIQFQDRPDVYNQFLDIMKDFKGQVIDTPGVIERVSMLFHGNPYLIQ 85

Query: 103 GFNTFLPKGYEI 114
           GFNTFLP GY I
Sbjct: 86  GFNTFLPPGYHI 97



 Score = 73.6 bits (179), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 41/103 (39%), Positives = 59/103 (57%), Gaps = 19/103 (18%)

Query: 118 LEDEQPPPKKPVEFEEAINFVNKIKTRFQ--GDDHVYKSFLDILNMYRKENKSI------ 169
           +E  + PP    EF+ AI F+N+IKTR+    + + YK FL+IL +YRKE  ++      
Sbjct: 208 VEITRAPPTS--EFDHAIQFLNRIKTRYPDGPNANTYKQFLEILQIYRKEQTNLFKDPTT 265

Query: 170 ---------TEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASI 203
                    T+VY +V+ LF+D PDLL EF  FLP+  GA  +
Sbjct: 266 YQQREKQMMTDVYAQVQLLFKDAPDLLGEFKKFLPELMGATGM 308



 Score = 50.1 bits (118), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 2/74 (2%)

Query: 124 PP--KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQ 181
           PP   +P+   +A+++++ +K +FQ    VY  FLDI+  ++ +      V + V  LF 
Sbjct: 19  PPDMTRPLNVTDALSYLDAVKIQFQDRPDVYNQFLDIMKDFKGQVIDTPGVIERVSMLFH 78

Query: 182 DHPDLLEEFTHFLP 195
            +P L++ F  FLP
Sbjct: 79  GNPYLIQGFNTFLP 92


>gi|297850764|ref|XP_002893263.1| hypothetical protein ARALYDRAFT_889830 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339105|gb|EFH69522.1| hypothetical protein ARALYDRAFT_889830 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 182

 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 71/111 (63%), Gaps = 5/111 (4%)

Query: 118 LEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVE 177
             D QPP KK  EF +AI FVNKI TRFQG    YKSFLDILN+YRKE KSI EVY EV 
Sbjct: 27  FRDGQPPLKKCNEFMDAIGFVNKINTRFQGGRS-YKSFLDILNLYRKERKSIKEVYDEVA 85

Query: 178 ALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQVH 228
            LF+DH DLL EFTHFLP +   AS H +       +RD    +P   Q+H
Sbjct: 86  ILFRDHSDLLAEFTHFLPATPATASFHSLKPQ----VRDTEICVPMMHQMH 132



 Score = 49.7 bits (117), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 36/102 (35%), Positives = 44/102 (43%), Gaps = 29/102 (28%)

Query: 36  GGGGAQKLTTNDALAYLKAVKDI----------------------------FQDKREKYD 67
           GG  AQK TTNDALAYLKAVK                              FQ  R  Y 
Sbjct: 3   GGASAQKPTTNDALAYLKAVKKKKFRDGQPPLKKCNEFMDAIGFVNKINTRFQGGRS-YK 61

Query: 68  DFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLP 109
            FL+++  ++ +R     V   V  LF+ H DL+  F  FLP
Sbjct: 62  SFLDILNLYRKERKSIKEVYDEVAILFRDHSDLLAEFTHFLP 103


>gi|440789916|gb|ELR11207.1| hypothetical protein ACA1_389180 [Acanthamoeba castellanii str.
           Neff]
          Length = 452

 Score =  117 bits (293), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 64/152 (42%), Positives = 83/152 (54%), Gaps = 37/152 (24%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFN 105
           NDAL +L AVK  + D+ E Y  FLE+MKDFKAQR+DT GV+A V+ELF G+ +LI GFN
Sbjct: 172 NDALDFLGAVKRRYADRPEVYQSFLEIMKDFKAQRLDTPGVLAAVRELFSGNEELIEGFN 231

Query: 106 TFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKE 165
                                                 RF     VYK+FL+ L+ + K+
Sbjct: 232 -------------------------------------KRFITAPGVYKAFLETLHEFHKQ 254

Query: 166 NKSITEVYQEVEALFQDHPDLLEEFTHFLPDS 197
           N+SI EV+  V  LF+DHPDLL  F  FLP++
Sbjct: 255 NQSIREVHAHVAHLFKDHPDLLAGFVEFLPET 286


>gi|145482543|ref|XP_001427294.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124394374|emb|CAK59896.1| unnamed protein product [Paramecium tetraurelia]
          Length = 882

 Score =  116 bits (291), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 71/220 (32%), Positives = 119/220 (54%), Gaps = 19/220 (8%)

Query: 493 LAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFK 552
           L KP+++ D +  +R T SY  +P  Y       +     E+LN  WVSV  GSED SF 
Sbjct: 265 LFKPLKDTDFAQVDRVTRSYVRMPIGY------AKANNNPEILNHSWVSVPFGSEDQSFL 318

Query: 553 HMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFT 612
            MRKN +EE LF+ ED+RFE D+ ++ +  T   ++E+   I+ N  +     +V D   
Sbjct: 319 IMRKNTFEEQLFKSEDERFEFDVNIQQIKRTINLLQEI---IDGNKGEQALVTKVID--- 372

Query: 613 ALNLRCIERLYGDHGLD---VMDVLRKNASLALPVILTRLKQKQEEWARCR-SDFNKVWA 668
              +R +++LY +   D   ++ + +     +  +++ R+KQK  E  + R +   +VW 
Sbjct: 373 ---MRILQQLYRNQTQDQNEIIQLFQSKPVESAKILIKRVKQKLNELVQARNTKAKQVWD 429

Query: 669 EIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISE 708
            + + N+H+SLDHRSFYFK+ D   +  +    EI+E ++
Sbjct: 430 TVSTINFHRSLDHRSFYFKKNDKLVINGQRFVREIEEYAK 469


>gi|297850912|ref|XP_002893337.1| hypothetical protein ARALYDRAFT_335662 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339179|gb|EFH69596.1| hypothetical protein ARALYDRAFT_335662 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 236

 Score =  116 bits (290), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 67/157 (42%), Positives = 89/157 (56%), Gaps = 24/157 (15%)

Query: 42  KLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLI 101
           K T +DA +YL AVK  F D+  KY++ ++++ D KA+R+D A VIARV+EL K H +L+
Sbjct: 103 KPTMDDATSYLIAVKKAFHDEPTKYEEIIKLLNDLKARRLDAASVIARVEELMKDHLNLL 162

Query: 102 LGFNTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGD-DHVYKSFLDILN 160
           LGF  FL                          ++F+ K+K RFQGD  HV  S L I+ 
Sbjct: 163 LGFCVFL-----------------------SAKMSFITKLKVRFQGDGSHVVDSVLQIMR 199

Query: 161 MYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLPDS 197
           MY + NKS  +VYQEV AL Q H DLL E +    DS
Sbjct: 200 MYSEGNKSKNDVYQEVGALIQGHGDLLMELSEIFSDS 236


>gi|327291796|ref|XP_003230606.1| PREDICTED: paired amphipathic helix protein Sin3b-like, partial
           [Anolis carolinensis]
          Length = 606

 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 75/224 (33%), Positives = 119/224 (53%), Gaps = 13/224 (5%)

Query: 573 LDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TALNLRCIERLYGDHGL 628
           LD++LE+   T + +E + +K+     +     R++D        +  R I R+YGD   
Sbjct: 1   LDVVLETNLATIRVLESVQKKLGRMAPEDQEKFRLDDCLGGTSEVIQRRAIYRIYGDKAP 60

Query: 629 DVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQ 688
           ++++ L+KN   ALPV+L RLK K+EEW   +  FNK+W E Y K Y KSLDH++  FKQ
Sbjct: 61  EIIESLKKNPLTALPVVLKRLKAKEEEWREAQQGFNKIWREQYEKAYLKSLDHQAVNFKQ 120

Query: 689 QDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQL 748
            D+K+L +K+L  EI+ + ++ +++       A+       PHL F Y D  I ED+  L
Sbjct: 121 NDTKALRSKSLLNEIESVYDEHQEQHSEARGAASE------PHLIFVYEDKQILEDVAAL 174

Query: 749 IKYSCGEMCTTEQLDK--VMKIWTTFL-EPMLGVPSRPQGAEDT 789
           I Y      T ++ D+  +  I   F+ E      + P  AE+T
Sbjct: 175 ISYYVKRQPTIQKEDQATIRHIVQHFVPELFFSRTAEPPAAEET 218


>gi|336262930|ref|XP_003346247.1| hypothetical protein SMAC_05784 [Sordaria macrospora k-hell]
 gi|380093576|emb|CCC08540.1| unnamed protein product [Sordaria macrospora k-hell]
          Length = 1500

 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 79/227 (34%), Positives = 117/227 (51%), Gaps = 14/227 (6%)

Query: 496 PIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHM 554
           P+ ++ LSNC    PSYRLLP+   +   S R EL   VLND W S  T  SED  F   
Sbjct: 718 PLGKVSLSNCRGFGPSYRLLPRRERLRPCSGRDELCNSVLNDGWASHPTWASEDSGFVAH 777

Query: 555 RKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDG--------PIR 606
           RKN YEE L R E++R + D  +E+     ++  +LLE I    +            P  
Sbjct: 778 RKNGYEEGLHRIEEERHDYDFYIEA----NQKCIQLLEPIAQQMLTLTPAERQHFKMPAG 833

Query: 607 VEDHFTALNLRCIERLYG-DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNK 665
           +    T++  R ++++YG + G +V + + KN    +P+++ RLKQK EEW   + ++ K
Sbjct: 834 LGGQSTSIYKRVLKKIYGPEKGCEVANEMFKNPFAVVPIVMARLKQKDEEWRFTQREWEK 893

Query: 666 VWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRK 712
           VW       + KSLDH     K  D ++L AK L   IK   E++R+
Sbjct: 894 VWQSQTETMHLKSLDHMGIQVKTNDKRNLSAKHLVDVIKTKHEEQRR 940



 Score = 99.4 bits (246), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 51/103 (49%), Positives = 65/103 (63%), Gaps = 6/103 (5%)

Query: 18  MISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFK 77
           M +    PSG T +  G      Q+   NDAL+YL  VK  F ++ + Y+ FL++MKDFK
Sbjct: 205 MSAGHPMPSGPTGMPQG------QQPILNDALSYLDQVKVQFHEQPDVYNKFLDIMKDFK 258

Query: 78  AQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLED 120
           +Q I+T GVI RV ELF GH +LI GFNTFLP GY I   LE+
Sbjct: 259 SQTINTPGVITRVSELFAGHPNLIQGFNTFLPPGYRIECGLEN 301



 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 80/299 (26%), Positives = 132/299 (44%), Gaps = 32/299 (10%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           + PVEF  AI++VNKIK RFQ    +YK FL+IL  Y++E K I +VY +V  LF   PD
Sbjct: 440 RGPVEFNHAISYVNKIKNRFQDKPEIYKQFLEILQTYQREQKPIQDVYSQVTTLFHAAPD 499

Query: 186 LLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQVHVDKKERAMASHADRDLS 245
           LLE+F  FLP+S+        P+G+  +  + S+AM     V     +  +     RD  
Sbjct: 500 LLEDFKQFLPESAAQTR----PAGQQRL--EDSAAM----AVTTPTPQPGLPV---RDQQ 546

Query: 246 VDRPDPDHDRVLLKSDKDQRRRGEKERERRDDHRRERERDDRDFENDVNRDFSMQRFPHK 305
              P   +      + K+ ++R   E+          E+             S++     
Sbjct: 547 PKMPPVGNFAPPPSASKESKKRPRVEKAVPTAAPPTSEQPPVS---------SLRSTIQP 597

Query: 306 RKSARKIEDSTAEPLHQGGEGDENF---GMHPVSSSYDDKNAMKSMFSQELSFCEKVKDK 362
              A K    T +P+     GD NF    + PV         + +    ++ F E+VK  
Sbjct: 598 AAPANKRAKLTHKPV----AGDGNFVEPTLTPVMPEPLGPIPLSTSGQDDVQFFERVKKH 653

Query: 363 L--RDDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLARCEKSEELL 419
           +  R    EF++ ++L+  ++I +  L       +G  P+L++     L R   +EE++
Sbjct: 654 IGNRTAMGEFMKLINLWNLDLIEKDVLIYKANHFMGGNPELLNTLRHML-RHTGTEEVV 711



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 41/72 (56%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFN 105
           N A++Y+  +K+ FQDK E Y  FLE+++ ++ ++     V ++V  LF    DL+  F 
Sbjct: 446 NHAISYVNKIKNRFQDKPEIYKQFLEILQTYQREQKPIQDVYSQVTTLFHAAPDLLEDFK 505

Query: 106 TFLPKGYEITLP 117
            FLP+    T P
Sbjct: 506 QFLPESAAQTRP 517



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 21/70 (30%), Positives = 41/70 (58%), Gaps = 1/70 (1%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           ++P+   +A+++++++K +F     VY  FLDI+  ++ +  +   V   V  LF  HP+
Sbjct: 222 QQPI-LNDALSYLDQVKVQFHEQPDVYNKFLDIMKDFKSQTINTPGVITRVSELFAGHPN 280

Query: 186 LLEEFTHFLP 195
           L++ F  FLP
Sbjct: 281 LIQGFNTFLP 290


>gi|145545823|ref|XP_001458595.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124426416|emb|CAK91198.1| unnamed protein product [Paramecium tetraurelia]
          Length = 928

 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 77/220 (35%), Positives = 115/220 (52%), Gaps = 15/220 (6%)

Query: 493 LAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFK 552
           L KP+++ D  N E  T SY  +   Y   +  +       VLN  WVSV  GSEDYSF 
Sbjct: 284 LFKPLKDTDFKNAEHITGSYVRMHPGY--ANIMKEDPKLPNVLNHLWVSVPFGSEDYSFS 341

Query: 553 HMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFT 612
            MRKN +EE LF+ ED+ FE D+ +     T K +++L+    NN+   +  IR      
Sbjct: 342 IMRKNSFEEQLFKIEDEMFEYDVNINCYRRTIKLLDQLIA--GNNSQAIEQQIR-----K 394

Query: 613 ALNLRCIERLYGDHGLD---VMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAE 669
            L ++C++ +Y  +  D   V+ + +KN  L  P++  RL QK +E  + R   N+ W  
Sbjct: 395 ILQIKCLQSVYKTNSKDQEEVITLWQKNPILCSPILRDRLNQKCQELIKSREIANQTWKI 454

Query: 670 IYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEK 709
               N+ +SLDHRSFYFK+ + +      +S  +KE  EK
Sbjct: 455 TQKNNFSRSLDHRSFYFKKNEKQ---YTCVSRFLKEPDEK 491


>gi|357455615|ref|XP_003598088.1| Paired amphipathic helix protein Sin3 [Medicago truncatula]
 gi|355487136|gb|AES68339.1| Paired amphipathic helix protein Sin3 [Medicago truncatula]
          Length = 160

 Score =  114 bits (285), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 67/160 (41%), Positives = 97/160 (60%), Gaps = 5/160 (3%)

Query: 41  QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDL 100
           +K T  DALA L AVK   Q   EKY+ F++++ DFKA+ IDT     RV ELFKGH DL
Sbjct: 2   KKRTWGDALALLTAVK---QKSMEKYESFVQIVLDFKAENIDTRVYKLRVYELFKGHEDL 58

Query: 101 ILGFNTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDH-VYKSFLDIL 159
           IL FNTF+P  YEI LPL+ +    ++ +E ++A++F+ K+K  F G +   Y  FL ++
Sbjct: 59  ILRFNTFVPTEYEIKLPLDHDNDESRR-LEIKDALSFLKKVKDTFPGKNRKKYAEFLKLM 117

Query: 160 NMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSG 199
             ++      + V + V+ LF+ H DL+  F  FLP + G
Sbjct: 118 KDFKACRIDTSGVAERVKGLFKGHTDLILGFNIFLPKTYG 157



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 50/78 (64%), Positives = 60/78 (76%), Gaps = 1/78 (1%)

Query: 40  AQKLTTNDALAYLKAVKDIFQDK-REKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHR 98
           +++L   DAL++LK VKD F  K R+KY +FL++MKDFKA RIDT+GV  RVK LFKGH 
Sbjct: 83  SRRLEIKDALSFLKKVKDTFPGKNRKKYAEFLKLMKDFKACRIDTSGVAERVKGLFKGHT 142

Query: 99  DLILGFNTFLPKGYEITL 116
           DLILGFN FLPK Y  TL
Sbjct: 143 DLILGFNIFLPKTYGNTL 160


>gi|15223468|ref|NP_174047.1| paired amphipathic helix repeat-containing protein [Arabidopsis
           thaliana]
 gi|332192680|gb|AEE30801.1| paired amphipathic helix repeat-containing protein [Arabidopsis
           thaliana]
          Length = 225

 Score =  114 bits (284), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 59/137 (43%), Positives = 89/137 (64%), Gaps = 1/137 (0%)

Query: 44  TTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILG 103
           T +DA++Y+  VK+ F D+  KY +F ++  D + + ID AG I RV+EL K H++L++ 
Sbjct: 78  TIDDAVSYINTVKEAFHDEPAKYYEFFQLFYDIRYRLIDVAGGITRVEELLKAHKNLLVR 137

Query: 104 FNTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDD-HVYKSFLDILNMY 162
            N FLP   +  L L+ EQ       + +   +F+ K+K RFQGDD HVY+SFL+IL MY
Sbjct: 138 LNAFLPPEAQRILHLKIEQRAASDINKRKRVASFIGKLKERFQGDDRHVYESFLEILTMY 197

Query: 163 RKENKSITEVYQEVEAL 179
           ++ NKS+ ++YQEV  L
Sbjct: 198 QEGNKSVNDLYQEVGFL 214



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 36/145 (24%), Positives = 67/145 (46%), Gaps = 6/145 (4%)

Query: 55  VKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEI 114
           +++++ D+ EK++  L +++D+   R D A + A + EL + H +L++ F  F P   E 
Sbjct: 1   MEEVYHDEPEKFNHILHLIRDYFNHRDDRARITACMGELMRDHLNLLVRFFDFFPA--EA 58

Query: 115 TLPLEDEQPPPKKPVE----FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSIT 170
           +  L   Q      V      ++A++++N +K  F  +   Y  F  +    R     + 
Sbjct: 59  SEGLAQLQTIAATSVSPDSTIDDAVSYINTVKEAFHDEPAKYYEFFQLFYDIRYRLIDVA 118

Query: 171 EVYQEVEALFQDHPDLLEEFTHFLP 195
                VE L + H +LL     FLP
Sbjct: 119 GGITRVEELLKAHKNLLVRLNAFLP 143


>gi|156054738|ref|XP_001593295.1| hypothetical protein SS1G_06217 [Sclerotinia sclerotiorum 1980]
 gi|154703997|gb|EDO03736.1| hypothetical protein SS1G_06217 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 1447

 Score =  114 bits (284), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 83/242 (34%), Positives = 114/242 (47%), Gaps = 25/242 (10%)

Query: 524 ASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNV 582
            S R E+   VLND W S  T  SED  F   RKN +EE L R E++R + D  +E    
Sbjct: 697 CSGRDEMCHAVLNDDWASHPTWASEDSGFVAHRKNIFEEGLHRIEEERHDYDFNIE---- 752

Query: 583 TTKRVEELLEKINNNTIKTDGPIRVEDHFT-------ALNLRCIERLYG-DHGLDVMDVL 634
              +V +LLE I    +  D   R             A+  R ++++YG + G  V+  L
Sbjct: 753 CNAKVIQLLEPIAQQIVAMDPAERQNFRMPNTAGPNQAIYKRVLKKIYGTEKGPQVVSDL 812

Query: 635 RKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSL 694
            ++    LPVIL RLKQK EEW   R ++N VW    S  Y KSLDH   + KQ D K  
Sbjct: 813 IQDPCAVLPVILARLKQKDEEWTFTRREWNPVWGAQGSVMYLKSLDHMGIHVKQADKKHF 872

Query: 695 GAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPD---IHEDLYQLIKY 751
            AK L   IK   E++R+           + R   P  ++ Y   D   I + L+ +I Y
Sbjct: 873 AAKHLVDSIKTKHEEQRR---------LRSSRGPTPKYQYSYQFADQEVIGQLLHVMIVY 923

Query: 752 SC 753
           +C
Sbjct: 924 AC 925



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 50/90 (55%), Positives = 60/90 (66%), Gaps = 8/90 (8%)

Query: 25  PSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTA 84
           P+G TQ        G Q+   NDAL+YL  VK  F D+ + Y+ FL++MKDFK+Q IDT 
Sbjct: 220 PAGLTQ--------GGQQPILNDALSYLDQVKVQFADQPDVYNRFLDIMKDFKSQAIDTP 271

Query: 85  GVIARVKELFKGHRDLILGFNTFLPKGYEI 114
           GVI RV ELF GH +LI GFNTFLP GY I
Sbjct: 272 GVINRVSELFAGHPNLIQGFNTFLPPGYRI 301



 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 39/72 (54%), Positives = 51/72 (70%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           + PVEF  AI++VNKIK RFQ    +YK FL+IL  Y++E+K I +VY +V  LF   PD
Sbjct: 453 RGPVEFNHAISYVNKIKNRFQDKPEIYKQFLEILQTYQRESKPIQDVYGQVTTLFGTAPD 512

Query: 186 LLEEFTHFLPDS 197
           LLE+F  FLP+S
Sbjct: 513 LLEDFKQFLPES 524



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 55/112 (49%), Gaps = 13/112 (11%)

Query: 12  SQIKRPMISSRGEPSGQTQVVGGGG------GGGAQK-------LTTNDALAYLKAVKDI 58
           SQ+   + ++ G+P   TQ    GG      G GAQ        +  N A++Y+  +K+ 
Sbjct: 412 SQLTNAVSATLGQPPRNTQTPTPGGSSGNLNGSGAQPGMEKRGPVEFNHAISYVNKIKNR 471

Query: 59  FQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPK 110
           FQDK E Y  FLE+++ ++ +      V  +V  LF    DL+  F  FLP+
Sbjct: 472 FQDKPEIYKQFLEILQTYQRESKPIQDVYGQVTTLFGTAPDLLEDFKQFLPE 523



 Score = 49.3 bits (116), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 21/70 (30%), Positives = 40/70 (57%), Gaps = 1/70 (1%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           ++P+   +A+++++++K +F     VY  FLDI+  ++ +      V   V  LF  HP+
Sbjct: 228 QQPI-LNDALSYLDQVKVQFADQPDVYNRFLDIMKDFKSQAIDTPGVINRVSELFAGHPN 286

Query: 186 LLEEFTHFLP 195
           L++ F  FLP
Sbjct: 287 LIQGFNTFLP 296



 Score = 42.4 bits (98), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 3/64 (4%)

Query: 349 FSQELSFCEKVKDKLRDD---YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGF 405
           F+  +S+  K+K++ +D    Y++FL  L  Y +E     ++   V  L G  PDL++ F
Sbjct: 458 FNHAISYVNKIKNRFQDKPEIYKQFLEILQTYQRESKPIQDVYGQVTTLFGTAPDLLEDF 517

Query: 406 NGFL 409
             FL
Sbjct: 518 KQFL 521


>gi|164427863|ref|XP_965709.2| hypothetical protein NCU02578 [Neurospora crassa OR74A]
 gi|157071913|gb|EAA36473.2| conserved hypothetical protein [Neurospora crassa OR74A]
          Length = 1486

 Score =  113 bits (283), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 79/227 (34%), Positives = 116/227 (51%), Gaps = 14/227 (6%)

Query: 496 PIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHM 554
           P  ++ LSNC    PSYRLLP+   +   S R EL   VLND W S  T  SED  F   
Sbjct: 712 PPGKVSLSNCRGFGPSYRLLPRRERLRPCSGRDELCNSVLNDGWASHPTWASEDSGFVAH 771

Query: 555 RKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDG--------PIR 606
           RKN YEE L R E++R + D  +E+     ++  +LLE I    +            P  
Sbjct: 772 RKNGYEEGLHRIEEERHDYDFYIEA----NQKCIQLLEPIAQQMLTLTPAERAHFKMPAG 827

Query: 607 VEDHFTALNLRCIERLYG-DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNK 665
           +    T++  R ++++YG + G +V + + KN    +P+++ RLKQK EEW   + ++ K
Sbjct: 828 LGGQSTSIYKRVLKKIYGPEKGCEVANEMFKNPFAVVPIVMARLKQKDEEWRFTQREWEK 887

Query: 666 VWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRK 712
           VW       + KSLDH     K  D ++L AK L   IK   E++R+
Sbjct: 888 VWQSQTETMHLKSLDHMGIQVKTNDKRNLSAKHLVDVIKTKHEEQRR 934



 Score = 99.4 bits (246), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 51/104 (49%), Positives = 65/104 (62%), Gaps = 2/104 (1%)

Query: 17  PMISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDF 76
           P  S+ G  +G     G  G    Q+   NDAL+YL  VK  F ++ + Y+ FL++MKDF
Sbjct: 198 PFGSNMG--AGHPMPSGPSGMPQGQQPILNDALSYLDQVKVQFHEQPDVYNKFLDIMKDF 255

Query: 77  KAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLED 120
           K+Q I+T GVI RV ELF GH +LI GFNTFLP GY I   LE+
Sbjct: 256 KSQTINTPGVITRVSELFAGHPNLIQGFNTFLPPGYRIECGLEN 299



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 36/74 (48%), Positives = 49/74 (66%), Gaps = 4/74 (5%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           + PVEF  AI++VNKIK +      +YK FL+IL  Y++E K I +VY +V  LF   PD
Sbjct: 438 RGPVEFNHAISYVNKIKDK----PEIYKQFLEILQTYQREQKPIQDVYSQVTTLFHAAPD 493

Query: 186 LLEEFTHFLPDSSG 199
           LLE+F  FLP+S+ 
Sbjct: 494 LLEDFKQFLPESAA 507



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 21/70 (30%), Positives = 41/70 (58%), Gaps = 1/70 (1%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           ++P+   +A+++++++K +F     VY  FLDI+  ++ +  +   V   V  LF  HP+
Sbjct: 220 QQPI-LNDALSYLDQVKVQFHEQPDVYNKFLDIMKDFKSQTINTPGVITRVSELFAGHPN 278

Query: 186 LLEEFTHFLP 195
           L++ F  FLP
Sbjct: 279 LIQGFNTFLP 288



 Score = 45.1 bits (105), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 4/78 (5%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFN 105
           N A++Y+  +KD    K E Y  FLE+++ ++ ++     V ++V  LF    DL+  F 
Sbjct: 444 NHAISYVNKIKD----KPEIYKQFLEILQTYQREQKPIQDVYSQVTTLFHAAPDLLEDFK 499

Query: 106 TFLPKGYEITLPLEDEQP 123
            FLP+    T P   ++P
Sbjct: 500 QFLPESAAQTRPAGQQRP 517


>gi|336464846|gb|EGO53086.1| hypothetical protein NEUTE1DRAFT_73353 [Neurospora tetrasperma FGSC
           2508]
          Length = 1486

 Score =  113 bits (283), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 79/227 (34%), Positives = 116/227 (51%), Gaps = 14/227 (6%)

Query: 496 PIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHM 554
           P  ++ LSNC    PSYRLLP+   +   S R EL   VLND W S  T  SED  F   
Sbjct: 712 PPGKVSLSNCRGFGPSYRLLPRRERLRPCSGRDELCNSVLNDGWASHPTWASEDSGFVAH 771

Query: 555 RKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDG--------PIR 606
           RKN YEE L R E++R + D  +E+     ++  +LLE I    +            P  
Sbjct: 772 RKNGYEEGLHRIEEERHDYDFYIEA----NQKCIQLLEPIAQQMLTLTPAERAHFKMPAG 827

Query: 607 VEDHFTALNLRCIERLYG-DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNK 665
           +    T++  R ++++YG + G +V + + KN    +P+++ RLKQK EEW   + ++ K
Sbjct: 828 LGGQSTSIYKRVLKKIYGPEKGCEVANEMFKNPFAVVPIVMARLKQKDEEWRFTQREWEK 887

Query: 666 VWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRK 712
           VW       + KSLDH     K  D ++L AK L   IK   E++R+
Sbjct: 888 VWQSQTETMHLKSLDHMGIQVKTNDKRNLSAKHLVDVIKTKHEEQRR 934



 Score = 99.4 bits (246), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 51/104 (49%), Positives = 65/104 (62%), Gaps = 2/104 (1%)

Query: 17  PMISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDF 76
           P  S+ G  +G     G  G    Q+   NDAL+YL  VK  F ++ + Y+ FL++MKDF
Sbjct: 198 PFGSNMG--AGHPMPSGPSGMPQGQQPILNDALSYLDQVKVQFHEQPDVYNKFLDIMKDF 255

Query: 77  KAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLED 120
           K+Q I+T GVI RV ELF GH +LI GFNTFLP GY I   LE+
Sbjct: 256 KSQTINTPGVITRVSELFAGHPNLIQGFNTFLPPGYRIECGLEN 299



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 36/74 (48%), Positives = 49/74 (66%), Gaps = 4/74 (5%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           + PVEF  AI++VNKIK +      +YK FL+IL  Y++E K I +VY +V  LF   PD
Sbjct: 438 RGPVEFNHAISYVNKIKDK----PEIYKQFLEILQTYQREQKPIQDVYSQVTTLFHAAPD 493

Query: 186 LLEEFTHFLPDSSG 199
           LLE+F  FLP+S+ 
Sbjct: 494 LLEDFKQFLPESAA 507



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 21/70 (30%), Positives = 41/70 (58%), Gaps = 1/70 (1%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           ++P+   +A+++++++K +F     VY  FLDI+  ++ +  +   V   V  LF  HP+
Sbjct: 220 QQPI-LNDALSYLDQVKVQFHEQPDVYNKFLDIMKDFKSQTINTPGVITRVSELFAGHPN 278

Query: 186 LLEEFTHFLP 195
           L++ F  FLP
Sbjct: 279 LIQGFNTFLP 288



 Score = 45.1 bits (105), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 4/78 (5%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFN 105
           N A++Y+  +KD    K E Y  FLE+++ ++ ++     V ++V  LF    DL+  F 
Sbjct: 444 NHAISYVNKIKD----KPEIYKQFLEILQTYQREQKPIQDVYSQVTTLFHAAPDLLEDFK 499

Query: 106 TFLPKGYEITLPLEDEQP 123
            FLP+    T P   ++P
Sbjct: 500 QFLPESAAQTRPAGQQRP 517


>gi|38567128|emb|CAE76423.1| related to transcription regulatory protein [Neurospora crassa]
          Length = 1499

 Score =  113 bits (283), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 79/227 (34%), Positives = 116/227 (51%), Gaps = 14/227 (6%)

Query: 496 PIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHM 554
           P  ++ LSNC    PSYRLLP+   +   S R EL   VLND W S  T  SED  F   
Sbjct: 725 PPGKVSLSNCRGFGPSYRLLPRRERLRPCSGRDELCNSVLNDGWASHPTWASEDSGFVAH 784

Query: 555 RKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDG--------PIR 606
           RKN YEE L R E++R + D  +E+     ++  +LLE I    +            P  
Sbjct: 785 RKNGYEEGLHRIEEERHDYDFYIEA----NQKCIQLLEPIAQQMLTLTPAERAHFKMPAG 840

Query: 607 VEDHFTALNLRCIERLYG-DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNK 665
           +    T++  R ++++YG + G +V + + KN    +P+++ RLKQK EEW   + ++ K
Sbjct: 841 LGGQSTSIYKRVLKKIYGPEKGCEVANEMFKNPFAVVPIVMARLKQKDEEWRFTQREWEK 900

Query: 666 VWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRK 712
           VW       + KSLDH     K  D ++L AK L   IK   E++R+
Sbjct: 901 VWQSQTETMHLKSLDHMGIQVKTNDKRNLSAKHLVDVIKTKHEEQRR 947



 Score = 99.4 bits (246), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 51/104 (49%), Positives = 65/104 (62%), Gaps = 2/104 (1%)

Query: 17  PMISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDF 76
           P  S+ G  +G     G  G    Q+   NDAL+YL  VK  F ++ + Y+ FL++MKDF
Sbjct: 198 PFGSNMG--AGHPMPSGPSGMPQGQQPILNDALSYLDQVKVQFHEQPDVYNKFLDIMKDF 255

Query: 77  KAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLED 120
           K+Q I+T GVI RV ELF GH +LI GFNTFLP GY I   LE+
Sbjct: 256 KSQTINTPGVITRVSELFAGHPNLIQGFNTFLPPGYRIECGLEN 299



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 39/83 (46%), Positives = 51/83 (61%), Gaps = 9/83 (10%)

Query: 126 KKPVEFEEAINFVNKIK---------TRFQGDDHVYKSFLDILNMYRKENKSITEVYQEV 176
           + PVEF  AI++VNKIK          RFQ    +YK FL+IL  Y++E K I +VY +V
Sbjct: 438 RGPVEFNHAISYVNKIKYGLKLTLFKNRFQDKPEIYKQFLEILQTYQREQKPIQDVYSQV 497

Query: 177 EALFQDHPDLLEEFTHFLPDSSG 199
             LF   PDLLE+F  FLP+S+ 
Sbjct: 498 TTLFHAAPDLLEDFKQFLPESAA 520



 Score = 50.4 bits (119), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 21/70 (30%), Positives = 41/70 (58%), Gaps = 1/70 (1%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           ++P+   +A+++++++K +F     VY  FLDI+  ++ +  +   V   V  LF  HP+
Sbjct: 220 QQPI-LNDALSYLDQVKVQFHEQPDVYNKFLDIMKDFKSQTINTPGVITRVSELFAGHPN 278

Query: 186 LLEEFTHFLP 195
           L++ F  FLP
Sbjct: 279 LIQGFNTFLP 288



 Score = 47.0 bits (110), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 9/87 (10%)

Query: 46  NDALAYLKAVK---------DIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKG 96
           N A++Y+  +K         + FQDK E Y  FLE+++ ++ ++     V ++V  LF  
Sbjct: 444 NHAISYVNKIKYGLKLTLFKNRFQDKPEIYKQFLEILQTYQREQKPIQDVYSQVTTLFHA 503

Query: 97  HRDLILGFNTFLPKGYEITLPLEDEQP 123
             DL+  F  FLP+    T P   ++P
Sbjct: 504 APDLLEDFKQFLPESAAQTRPAGQQRP 530


>gi|451853645|gb|EMD66938.1| hypothetical protein COCSADRAFT_283119 [Cochliobolus sativus ND90Pr]
          Length = 1609

 Score =  113 bits (282), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 79/219 (36%), Positives = 116/219 (52%), Gaps = 6/219 (2%)

Query: 500  LDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMRKNQ 558
            + LSNC    PSYRLLP+       S R EL   VLND W S  T  SED  F   RKN 
Sbjct: 844  VSLSNCRSLGPSYRLLPRRERERVCSGRDELCRSVLNDEWASHPTWASEDSGFVAHRKNT 903

Query: 559  YEESLFRCEDDRFELDMLLESVNVTTKRVE----ELLEKINNNTIKTDGPIRVEDHFTAL 614
            +EE L R E++R + D  +E+ + T +++E    +LL     + I    P  +      +
Sbjct: 904  FEEGLHRIEEERHDYDFNIEACSRTIQQLEPIANQLLTMKPEDRIGFTLPPGLGGQSETI 963

Query: 615  NLRCIERLYG-DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSK 673
              R I ++YG D G DV+  L +     +PV+L RLK K E+W   + ++ KVW +   K
Sbjct: 964  YKRVIMKIYGRDRGKDVIKELFQMPWSVVPVLLHRLKTKLEDWKAAQREWEKVWRDQTQK 1023

Query: 674  NYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRK 712
             + KSLDH+S   KQ D +    K+L+ EI+   E++++
Sbjct: 1024 IFWKSLDHQSITVKQVDKRQFQPKSLTNEIQVRYEEQKR 1062



 Score = 90.1 bits (222), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 44/82 (53%), Positives = 53/82 (64%)

Query: 33  GGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKE 92
           G    G  Q+   NDAL+YL  VK  F D  + Y+ FL++MKDFK+  IDT GVI RV  
Sbjct: 298 GSMAMGQGQQPILNDALSYLDQVKVQFADHPDVYNRFLDIMKDFKSGAIDTPGVIERVST 357

Query: 93  LFKGHRDLILGFNTFLPKGYEI 114
           LF G+  LI GFNTFLP GY+I
Sbjct: 358 LFAGNPALIQGFNTFLPPGYKI 379



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 38/74 (51%), Positives = 52/74 (70%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           + PVEF  AI++VNKIK RF     +YK+FL+IL  Y++E+K I +VY +V  LF   PD
Sbjct: 553 RGPVEFNHAISYVNKIKNRFAAHPDIYKNFLEILQTYQRESKPIQDVYAQVTHLFGGAPD 612

Query: 186 LLEEFTHFLPDSSG 199
           LLE+F  FLP+S+ 
Sbjct: 613 LLEDFKQFLPESAA 626



 Score = 49.7 bits (117), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 43/85 (50%)

Query: 26  SGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAG 85
           S Q   +GG        +  N A++Y+  +K+ F    + Y +FLE+++ ++ +      
Sbjct: 539 SAQLPQMGGAAAEKRGPVEFNHAISYVNKIKNRFAAHPDIYKNFLEILQTYQRESKPIQD 598

Query: 86  VIARVKELFKGHRDLILGFNTFLPK 110
           V A+V  LF G  DL+  F  FLP+
Sbjct: 599 VYAQVTHLFGGAPDLLEDFKQFLPE 623



 Score = 44.3 bits (103), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 20/70 (28%), Positives = 39/70 (55%), Gaps = 1/70 (1%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           ++P+   +A+++++++K +F     VY  FLDI+  ++        V + V  LF  +P 
Sbjct: 306 QQPI-LNDALSYLDQVKVQFADHPDVYNRFLDIMKDFKSGAIDTPGVIERVSTLFAGNPA 364

Query: 186 LLEEFTHFLP 195
           L++ F  FLP
Sbjct: 365 LIQGFNTFLP 374


>gi|15221706|ref|NP_173835.1| paired amphipathic helix domain-containing protein [Arabidopsis
           thaliana]
 gi|2829877|gb|AAC00585.1| Hypothetical protein [Arabidopsis thaliana]
 gi|332192379|gb|AEE30500.1| paired amphipathic helix domain-containing protein [Arabidopsis
           thaliana]
          Length = 252

 Score =  113 bits (282), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 65/154 (42%), Positives = 85/154 (55%), Gaps = 24/154 (15%)

Query: 44  TTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILG 103
           T +DA +YL AVK+ F D+  KY + L+++KDFKA+R+D A VIARV+EL K H +L+ G
Sbjct: 117 TIDDATSYLIAVKEAFHDEPAKYGEMLKLLKDFKARRVDAACVIARVEELMKDHLNLLFG 176

Query: 104 FNTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGD-DHVYKSFLDILNMY 162
           F  FL                           +F  K+K RFQGD   V  S L I+ MY
Sbjct: 177 FCVFL-----------------------SATTSFTTKLKARFQGDGSQVVDSVLQIMRMY 213

Query: 163 RKENKSITEVYQEVEALFQDHPDLLEEFTHFLPD 196
            + NKS  + YQEV AL Q H DL+ E +  L D
Sbjct: 214 GEGNKSKHDAYQEVVALVQGHDDLVMELSQILTD 247



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 79/180 (43%), Gaps = 20/180 (11%)

Query: 35  GGGGGAQKLTTNDALAYLKAVKDIFQD-KREKYDDFLEVMKDFKAQRIDTAGVIARVKEL 93
            GG  +   +  D  AY+ AV+   Q+ +  ++  F+ + + F A RI      AR+++L
Sbjct: 2   AGGSLSPASSLEDVKAYVNAVEVALQEMEPARFGMFVRLFRGFTAPRIGMPTFSARMQDL 61

Query: 94  FKGHRDLILGFNTFLPKGYEITLPLEDEQ------------PP-------PKKPVEFEEA 134
            K H  L LG N  LP  Y++T+P E  +            PP       P+     ++A
Sbjct: 62  LKDHPSLCLGLNVLLPPEYQLTIPPEASEEFHKVVGRSVPVPPKVVGRSLPRPEPTIDDA 121

Query: 135 INFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFL 194
            +++  +K  F  +   Y   L +L  ++        V   VE L +DH +LL  F  FL
Sbjct: 122 TSYLIAVKEAFHDEPAKYGEMLKLLKDFKARRVDAACVIARVEELMKDHLNLLFGFCVFL 181


>gi|350296951|gb|EGZ77928.1| hypothetical protein NEUTE2DRAFT_154470 [Neurospora tetrasperma
           FGSC 2509]
          Length = 1499

 Score =  113 bits (282), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 79/227 (34%), Positives = 116/227 (51%), Gaps = 14/227 (6%)

Query: 496 PIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHM 554
           P  ++ LSNC    PSYRLLP+   +   S R EL   VLND W S  T  SED  F   
Sbjct: 725 PPGKVSLSNCRGFGPSYRLLPRRERLRPCSGRDELCNSVLNDGWASHPTWASEDSGFVAH 784

Query: 555 RKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDG--------PIR 606
           RKN YEE L R E++R + D  +E+     ++  +LLE I    +            P  
Sbjct: 785 RKNGYEEGLHRIEEERHDYDFYIEA----NQKCIQLLEPIAQQMLTLTPAERAHFKMPAG 840

Query: 607 VEDHFTALNLRCIERLYG-DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNK 665
           +    T++  R ++++YG + G +V + + KN    +P+++ RLKQK EEW   + ++ K
Sbjct: 841 LGGQSTSIYKRVLKKIYGPEKGCEVANEMFKNPFSVVPIVMARLKQKDEEWRFTQREWEK 900

Query: 666 VWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRK 712
           VW       + KSLDH     K  D ++L AK L   IK   E++R+
Sbjct: 901 VWQSQTETMHLKSLDHMGIQVKTNDKRNLSAKHLVDVIKTKHEEQRR 947



 Score = 99.4 bits (246), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 51/104 (49%), Positives = 65/104 (62%), Gaps = 2/104 (1%)

Query: 17  PMISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDF 76
           P  S+ G  +G     G  G    Q+   NDAL+YL  VK  F ++ + Y+ FL++MKDF
Sbjct: 198 PFGSNMG--AGHPMPSGPSGMPQGQQPILNDALSYLDQVKVQFHEQPDVYNKFLDIMKDF 255

Query: 77  KAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLED 120
           K+Q I+T GVI RV ELF GH +LI GFNTFLP GY I   LE+
Sbjct: 256 KSQTINTPGVITRVSELFAGHPNLIQGFNTFLPPGYRIECGLEN 299



 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 80/308 (25%), Positives = 131/308 (42%), Gaps = 41/308 (13%)

Query: 126 KKPVEFEEAINFVNKIK---------TRFQGDDHVYKSFLDILNMYRKENKSITEVYQEV 176
           + PVEF  AI++VNKIK          RFQ    +YK FL+IL  Y++E K I +VY +V
Sbjct: 438 RGPVEFNHAISYVNKIKYGLELTLFKNRFQDKPEIYKQFLEILQTYQREQKPIQDVYSQV 497

Query: 177 EALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQVHVDKKERAM 236
             LF   PDLLE+F  FLP+S+        P+G+    R   SA   A  V     +  +
Sbjct: 498 TTLFHAAPDLLEDFKQFLPESAAQTR----PAGQQ---RPEDSA---AMAVTTPTPQPGL 547

Query: 237 ASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERRDDHRRERERDDRDFENDVNRD 296
            +   RD     P   +      + K+ ++R   E+          E+         +  
Sbjct: 548 PA---RDQQPKMPPVGNFAPPPSASKESKKRARVEKAVPTTAPPASEQPPVS-----SLR 599

Query: 297 FSMQRFPHKRKSARKIEDSTAEPLHQGGEGDENF---GMHPVSSSYDDKNAMKSMFSQEL 353
            ++Q      K A+          H+   GD NF    + PV         + +    ++
Sbjct: 600 STIQPAAPTNKRAKLS--------HKPVVGDGNFIEPTLTPVMPEPLGPIPLSTSGQDDV 651

Query: 354 SFCEKVKDKL--RDDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLAR 411
            F E+VK  +  R    EF++ ++L+  ++I +  L       +G  P+L++     L R
Sbjct: 652 QFFERVKKHIGNRTAMGEFMKLINLWNLDLIEKDVLIYKANHFMGGNPELLNTLRNML-R 710

Query: 412 CEKSEELL 419
              +EE++
Sbjct: 711 HTGTEEVV 718



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 21/70 (30%), Positives = 41/70 (58%), Gaps = 1/70 (1%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           ++P+   +A+++++++K +F     VY  FLDI+  ++ +  +   V   V  LF  HP+
Sbjct: 220 QQPI-LNDALSYLDQVKVQFHEQPDVYNKFLDIMKDFKSQTINTPGVITRVSELFAGHPN 278

Query: 186 LLEEFTHFLP 195
           L++ F  FLP
Sbjct: 279 LIQGFNTFLP 288



 Score = 47.0 bits (110), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 9/87 (10%)

Query: 46  NDALAYLKAVK---------DIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKG 96
           N A++Y+  +K         + FQDK E Y  FLE+++ ++ ++     V ++V  LF  
Sbjct: 444 NHAISYVNKIKYGLELTLFKNRFQDKPEIYKQFLEILQTYQREQKPIQDVYSQVTTLFHA 503

Query: 97  HRDLILGFNTFLPKGYEITLPLEDEQP 123
             DL+  F  FLP+    T P   ++P
Sbjct: 504 APDLLEDFKQFLPESAAQTRPAGQQRP 530


>gi|357480533|ref|XP_003610552.1| Paired amphipathic helix protein Sin3 [Medicago truncatula]
 gi|355511607|gb|AES92749.1| Paired amphipathic helix protein Sin3 [Medicago truncatula]
          Length = 266

 Score =  112 bits (281), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 64/151 (42%), Positives = 85/151 (56%), Gaps = 9/151 (5%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFN 105
           +DA AY  AVK   Q   EKY +F EVM D++  RID  GV ARV ELFKGH+ LILG N
Sbjct: 11  DDACAYDNAVKSTCQ---EKYSEFAEVMSDYRDGRIDPGGVKARVHELFKGHKHLILGIN 67

Query: 106 TFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKE 165
             +PK YEI LP  DE+      V  ++A  F+ ++K  FQ     Y  FL +++ +   
Sbjct: 68  NIMPKNYEIILPPSDEK------VNRQDATTFLKQVKVVFQDKMEKYYEFLQVIHDHMNL 121

Query: 166 NKSITEVYQEVEALFQDHPDLLEEFTHFLPD 196
              I +V +    LF+ H DLL    +FLP+
Sbjct: 122 TIDILDVIKTGMELFKGHVDLLSGLNYFLPE 152



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 58/156 (37%), Positives = 86/156 (55%), Gaps = 3/156 (1%)

Query: 41  QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDL 100
           +K+   DA  +LK VK +FQDK EKY +FL+V+ D     ID   VI    ELFKGH DL
Sbjct: 83  EKVNRQDATTFLKQVKVVFQDKMEKYYEFLQVIHDHMNLTIDILDVIKTGMELFKGHVDL 142

Query: 101 ILGFNTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILN 160
           + G N FLP+  +IT PL  +     + V  ++A  F+N++K  F      Y  FL ++ 
Sbjct: 143 LSGLNYFLPERIQITFPLLHDHKQGHQLV-IKDA--FLNEVKAVFHDKLEKYFEFLQLIT 199

Query: 161 MYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLPD 196
            ++ +      V   V+ LF++H +L+  F  FLP+
Sbjct: 200 DHKAQGIDTRGVVAIVKELFKEHRNLILGFNAFLPE 235



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 44/70 (62%), Positives = 54/70 (77%)

Query: 50  AYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLP 109
           A+L  VK +F DK EKY +FL+++ D KAQ IDT GV+A VKELFK HR+LILGFN FLP
Sbjct: 175 AFLNEVKAVFHDKLEKYFEFLQLITDHKAQGIDTRGVVAIVKELFKEHRNLILGFNAFLP 234

Query: 110 KGYEITLPLE 119
           + + ITLP E
Sbjct: 235 EEHRITLPFE 244


>gi|30681996|ref|NP_192939.2| putative WRKY transcription factor 19 [Arabidopsis thaliana]
 gi|332657684|gb|AEE83084.1| putative WRKY transcription factor 19 [Arabidopsis thaliana]
          Length = 1798

 Score =  112 bits (281), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 59/111 (53%), Positives = 78/111 (70%), Gaps = 12/111 (10%)

Query: 36  GGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFK 95
           GGG    +TT DAL YLKAVKD F+D  EKYD FLEV+ D K Q +DT+GVIAR+K+LFK
Sbjct: 297 GGGNMGGVTTGDALNYLKAVKDKFEDS-EKYDTFLEVLNDCKHQGVDTSGVIARLKDLFK 355

Query: 96  GHRDLILGFNTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQ 146
           GH DL+LGFNT+L K Y+IT+  ED+ P           I+F++K++  ++
Sbjct: 356 GHDDLLLGFNTYLSKEYQITILPEDDFP-----------IDFLDKVEGPYE 395


>gi|186511687|ref|NP_001118968.1| putative WRKY transcription factor 19 [Arabidopsis thaliana]
 gi|29839687|sp|Q9SZ67.1|WRK19_ARATH RecName: Full=Probable WRKY transcription factor 19; AltName:
           Full=WRKY DNA-binding protein 19
 gi|4586107|emb|CAB40943.1| putative disease resistance protein [Arabidopsis thaliana]
 gi|7267903|emb|CAB78245.1| putative disease resistance protein [Arabidopsis thaliana]
 gi|332657685|gb|AEE83085.1| putative WRKY transcription factor 19 [Arabidopsis thaliana]
          Length = 1895

 Score =  112 bits (281), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 59/111 (53%), Positives = 78/111 (70%), Gaps = 12/111 (10%)

Query: 36  GGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFK 95
           GGG    +TT DAL YLKAVKD F+D  EKYD FLEV+ D K Q +DT+GVIAR+K+LFK
Sbjct: 297 GGGNMGGVTTGDALNYLKAVKDKFEDS-EKYDTFLEVLNDCKHQGVDTSGVIARLKDLFK 355

Query: 96  GHRDLILGFNTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQ 146
           GH DL+LGFNT+L K Y+IT+  ED+ P           I+F++K++  ++
Sbjct: 356 GHDDLLLGFNTYLSKEYQITILPEDDFP-----------IDFLDKVEGPYE 395


>gi|238480299|ref|NP_001154222.1| putative WRKY transcription factor 19 [Arabidopsis thaliana]
 gi|332657686|gb|AEE83086.1| putative WRKY transcription factor 19 [Arabidopsis thaliana]
          Length = 1879

 Score =  112 bits (280), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 59/111 (53%), Positives = 78/111 (70%), Gaps = 12/111 (10%)

Query: 36  GGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFK 95
           GGG    +TT DAL YLKAVKD F+D  EKYD FLEV+ D K Q +DT+GVIAR+K+LFK
Sbjct: 297 GGGNMGGVTTGDALNYLKAVKDKFEDS-EKYDTFLEVLNDCKHQGVDTSGVIARLKDLFK 355

Query: 96  GHRDLILGFNTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQ 146
           GH DL+LGFNT+L K Y+IT+  ED+ P           I+F++K++  ++
Sbjct: 356 GHDDLLLGFNTYLSKEYQITILPEDDFP-----------IDFLDKVEGPYE 395


>gi|347839067|emb|CCD53639.1| similar to transcriptional regulatory protein SIN3 [Botryotinia
           fuckeliana]
          Length = 1485

 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 82/242 (33%), Positives = 113/242 (46%), Gaps = 25/242 (10%)

Query: 524 ASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNV 582
            S R E+   VLND W S  T  SED  F   RKN +EE L R E++R + D  +E    
Sbjct: 718 CSGRDEMCQAVLNDDWASHPTWASEDSGFVAHRKNIFEEGLHRIEEERHDYDFNIEC--- 774

Query: 583 TTKRVEELLEKINNNTIKTDGPIRVEDHFT-------ALNLRCIERLYG-DHGLDVMDVL 634
              +V +LLE I    +  D   R             A+  R ++++YG + G  V+  L
Sbjct: 775 -NAKVIQLLEPIAQQIVAMDPAERQNFRMPNTAGPNQAIYKRVLKKIYGAEKGPQVVTDL 833

Query: 635 RKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSL 694
            ++    LPVIL RLKQK EEW   R ++N VW       Y KSLDH   + KQ D K  
Sbjct: 834 IQDPCAVLPVILARLKQKDEEWTFTRREWNPVWGAQGGVMYLKSLDHMGIHVKQADKKHF 893

Query: 695 GAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPD---IHEDLYQLIKY 751
            AK L   IK   E++R+           + R   P  ++ Y   D   I + L+ +I Y
Sbjct: 894 AAKHLVDSIKTKHEEQRR---------LRSSRGPTPKYQYSYQFADQEVICQLLHIMIVY 944

Query: 752 SC 753
           +C
Sbjct: 945 AC 946



 Score = 99.8 bits (247), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 50/90 (55%), Positives = 60/90 (66%), Gaps = 8/90 (8%)

Query: 25  PSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTA 84
           P+G TQV         Q+   NDAL+YL  VK  F D+ + Y+ FL++MKDFK+Q IDT 
Sbjct: 197 PAGLTQV--------GQQPILNDALSYLDQVKVQFSDQPDVYNRFLDIMKDFKSQAIDTP 248

Query: 85  GVIARVKELFKGHRDLILGFNTFLPKGYEI 114
           GVI RV ELF GH +LI GFNTFLP GY I
Sbjct: 249 GVINRVSELFAGHPNLIQGFNTFLPPGYRI 278



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 38/70 (54%), Positives = 49/70 (70%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           + PVEF  AI++VNKIK RFQ    +YK FL+IL  Y++E+K I +VY +V  LF   PD
Sbjct: 435 RGPVEFNHAISYVNKIKNRFQDKPEIYKQFLEILQTYQRESKPIQDVYSQVTTLFGTAPD 494

Query: 186 LLEEFTHFLP 195
           LLE+F  FLP
Sbjct: 495 LLEDFKQFLP 504



 Score = 49.7 bits (117), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 23/64 (35%), Positives = 37/64 (57%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFN 105
           N A++Y+  +K+ FQDK E Y  FLE+++ ++ +      V ++V  LF    DL+  F 
Sbjct: 441 NHAISYVNKIKNRFQDKPEIYKQFLEILQTYQRESKPIQDVYSQVTTLFGTAPDLLEDFK 500

Query: 106 TFLP 109
            FLP
Sbjct: 501 QFLP 504



 Score = 49.3 bits (116), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 21/70 (30%), Positives = 40/70 (57%), Gaps = 1/70 (1%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           ++P+   +A+++++++K +F     VY  FLDI+  ++ +      V   V  LF  HP+
Sbjct: 205 QQPI-LNDALSYLDQVKVQFSDQPDVYNRFLDIMKDFKSQAIDTPGVINRVSELFAGHPN 263

Query: 186 LLEEFTHFLP 195
           L++ F  FLP
Sbjct: 264 LIQGFNTFLP 273



 Score = 43.9 bits (102), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 3/64 (4%)

Query: 349 FSQELSFCEKVKDKLRDD---YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGF 405
           F+  +S+  K+K++ +D    Y++FL  L  Y +E     ++ S V  L G  PDL++ F
Sbjct: 440 FNHAISYVNKIKNRFQDKPEIYKQFLEILQTYQRESKPIQDVYSQVTTLFGTAPDLLEDF 499

Query: 406 NGFL 409
             FL
Sbjct: 500 KQFL 503


>gi|15422161|gb|AAK95854.1| transcriptional co-repressor Sin3A [Homo sapiens]
          Length = 621

 Score =  112 bits (279), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 71/221 (32%), Positives = 101/221 (45%), Gaps = 69/221 (31%)

Query: 355 FCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLARC 412
           F +KV+  LR  + Y+ FLRCL ++ +E+I+R+EL  LV   LG++P+L + F  FL   
Sbjct: 467 FFDKVRKALRSAEAYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPELFNWFKNFLGYK 526

Query: 413 EKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRLDKSV 472
           E                       SV +E   +DR  E   G+                 
Sbjct: 527 E-----------------------SVHLETYPKDRATE---GIA---------------- 544

Query: 473 AFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGA 532
                                     E+D ++C+R   SYR L K+Y  P  + RT +  
Sbjct: 545 -------------------------MEIDYASCKRLGSSYRALGKSYQQPKCTGRTGVCK 579

Query: 533 EVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFEL 573
           EVLND WVS  S SED +F   +K QYEE ++RCED+RF+L
Sbjct: 580 EVLNDTWVSFPSWSEDCTFVSSKKTQYEEHIYRCEDERFDL 620



 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 40/84 (47%), Positives = 53/84 (63%), Gaps = 13/84 (15%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI-------------TEVY 173
           +PVEF  AIN+VNKIK RFQG   +YK+FL+IL+ Y+KE ++               EVY
Sbjct: 301 QPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVY 360

Query: 174 QEVEALFQDHPDLLEEFTHFLPDS 197
            +V  LF++  DLL EF  FLPD+
Sbjct: 361 AQVARLFKNQEDLLSEFGQFLPDA 384



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/70 (47%), Positives = 45/70 (64%), Gaps = 1/70 (1%)

Query: 41  QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDL 100
           Q+L   DAL+YL  VK  F  + + Y+DFL++MK+FK+Q IDT  VI+RV    KG   L
Sbjct: 119 QRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPRVISRVSHYSKGPPIL 178

Query: 101 ILGF-NTFLP 109
           I+G  + F P
Sbjct: 179 IMGIQHLFAP 188


>gi|452002014|gb|EMD94473.1| hypothetical protein COCHEDRAFT_1211875 [Cochliobolus heterostrophus
            C5]
          Length = 1604

 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 78/219 (35%), Positives = 116/219 (52%), Gaps = 6/219 (2%)

Query: 500  LDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMRKNQ 558
            + LSNC    PSYRLLP+       S R EL   VLND W S  T  SED  F   RKN 
Sbjct: 839  VSLSNCRSLGPSYRLLPRRERERVCSGRDELCRSVLNDEWASHPTWASEDSGFVAHRKNT 898

Query: 559  YEESLFRCEDDRFELDMLLESVNVTTKRVE----ELLEKINNNTIKTDGPIRVEDHFTAL 614
            +EE L R E++R + D  +E+ + T +++E    +LL     + I    P  +      +
Sbjct: 899  FEEGLHRIEEERHDYDFNIEACSRTIQQLEPIANQLLTMKPEDRIGFTLPPGLGGQSETI 958

Query: 615  NLRCIERLYG-DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSK 673
              R I ++YG + G DV+  L +     +PV+L RLK K E+W   + ++ KVW +   K
Sbjct: 959  YKRVIMKIYGRERGKDVIKELFQMPWSVVPVLLHRLKTKLEDWKAAQREWEKVWRDQTQK 1018

Query: 674  NYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRK 712
             + KSLDH+S   KQ D +    K+L+ EI+   E++++
Sbjct: 1019 IFWKSLDHQSITVKQVDKRQFQPKSLTNEIQVRYEEQKR 1057



 Score = 89.7 bits (221), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 44/82 (53%), Positives = 53/82 (64%)

Query: 33  GGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKE 92
           G    G  Q+   NDAL+YL  VK  F D  + Y+ FL++MKDFK+  IDT GVI RV  
Sbjct: 293 GSMAMGQGQQPILNDALSYLDQVKVQFADHPDVYNRFLDIMKDFKSGAIDTPGVIERVST 352

Query: 93  LFKGHRDLILGFNTFLPKGYEI 114
           LF G+  LI GFNTFLP GY+I
Sbjct: 353 LFAGNPALIQGFNTFLPPGYKI 374



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 38/74 (51%), Positives = 52/74 (70%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           + PVEF  AI++VNKIK RF     +YK+FL+IL  Y++E+K I +VY +V  LF   PD
Sbjct: 548 RGPVEFNHAISYVNKIKNRFAAHPDIYKNFLEILQTYQRESKPIQDVYAQVTHLFGGAPD 607

Query: 186 LLEEFTHFLPDSSG 199
           LLE+F  FLP+S+ 
Sbjct: 608 LLEDFKQFLPESAA 621



 Score = 49.7 bits (117), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 47/87 (54%), Gaps = 2/87 (2%)

Query: 26  SGQTQVVGGGGGGGAQK--LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDT 83
           +G TQ+   GG    ++  +  N A++Y+  +K+ F    + Y +FLE+++ ++ +    
Sbjct: 532 NGSTQLPQMGGATAEKRGPVEFNHAISYVNKIKNRFAAHPDIYKNFLEILQTYQRESKPI 591

Query: 84  AGVIARVKELFKGHRDLILGFNTFLPK 110
             V A+V  LF G  DL+  F  FLP+
Sbjct: 592 QDVYAQVTHLFGGAPDLLEDFKQFLPE 618



 Score = 43.9 bits (102), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 20/70 (28%), Positives = 39/70 (55%), Gaps = 1/70 (1%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           ++P+   +A+++++++K +F     VY  FLDI+  ++        V + V  LF  +P 
Sbjct: 301 QQPI-LNDALSYLDQVKVQFADHPDVYNRFLDIMKDFKSGAIDTPGVIERVSTLFAGNPA 359

Query: 186 LLEEFTHFLP 195
           L++ F  FLP
Sbjct: 360 LIQGFNTFLP 369


>gi|396471141|ref|XP_003838800.1| hypothetical protein LEMA_P024730.1 [Leptosphaeria maculans JN3]
 gi|312215369|emb|CBX95321.1| hypothetical protein LEMA_P024730.1 [Leptosphaeria maculans JN3]
          Length = 923

 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 89/288 (30%), Positives = 142/288 (49%), Gaps = 17/288 (5%)

Query: 500 LDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMRKNQ 558
           + LSNC    PSYRLLP+       S R EL   VLND W S  T  SED  F   RKN 
Sbjct: 161 VSLSNCRSLGPSYRLLPRRERERVCSGRDELCRSVLNDEWASHPTWASEDSGFVAHRKNT 220

Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDG------PIRVEDHFT 612
           +EE L R E++R + D  +E+ N T +++E +  ++   T+K +       P  +     
Sbjct: 221 FEEGLHRIEEERHDYDFNIEACNRTIQQLEPIANQLL--TMKPEDRTNFVLPPGLGGQSE 278

Query: 613 ALNLRCIERLYG-DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIY 671
            +  R I ++YG D G DV+  L       +PV+L RLK K E+W   + ++ KVW +  
Sbjct: 279 TIYKRVIMKIYGRDKGKDVIKELFAMPWSVVPVLLHRLKTKLEDWKAAQREWEKVWRDQT 338

Query: 672 SKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPH 731
            K + KSLDH+S   KQ D +    K+L+ EI ++  +++K    +  IA  + +     
Sbjct: 339 QKIFWKSLDHQSITAKQADKRQFQPKSLTNEI-QVRYEEQKRQQTIQEIAQPDYQ----- 392

Query: 732 LEFEYSDPDIHEDLYQLIKYSCGEMCTTEQLDKVMKIWTTFLEPMLGV 779
             F + D ++  D+ +L+  +  +   +    KV+     F+    G+
Sbjct: 393 FAFGFKDEEVLFDVARLM-LTFADNNNSADFSKVVPFIKEFIPLFFGI 439


>gi|145552021|ref|XP_001461687.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124429522|emb|CAK94314.1| unnamed protein product [Paramecium tetraurelia]
          Length = 884

 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/213 (34%), Positives = 108/213 (50%), Gaps = 12/213 (5%)

Query: 493 LAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFK 552
           L KP+++ D  N E  T SY  +   Y   +  +       VLN  WVSV  GSEDYSF 
Sbjct: 242 LFKPLKDTDFKNAEHITGSYVRMHPGY--ANIMKEDPKLPNVLNHLWVSVPFGSEDYSFS 299

Query: 553 HMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFT 612
            MRKN +EE LF+ ED+ FE D+ +     T K +++L+    NN    +  IR      
Sbjct: 300 IMRKNSFEEQLFKIEDEMFEYDVNINCYRRTIKLLDQLIA--GNNQQAIEQQIR-----K 352

Query: 613 ALNLRCIERLYGDHGLD---VMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAE 669
            L ++C++ +Y  +  D   V+ + +KN     P++  RL QK +E  + R   N+ W  
Sbjct: 353 ILQIKCLQSVYKTNSKDQEEVITLWQKNPVGCSPILRDRLNQKCQELIKSRDIANQTWKI 412

Query: 670 IYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAE 702
               N+ +SLDHRSFYFK+ + +   A     E
Sbjct: 413 TQKNNFSRSLDHRSFYFKKNEKQYTCASRFLKE 445


>gi|392597620|gb|EIW86942.1| hypothetical protein CONPUDRAFT_96004 [Coniophora puteana
           RWD-64-598 SS2]
          Length = 1193

 Score =  110 bits (275), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 87/277 (31%), Positives = 143/277 (51%), Gaps = 16/277 (5%)

Query: 510 PSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYS-FKHMRKNQYEESLFRCE 567
           PSYR  P++ L  + S R EL   VLND W S  T  SED + F   +KN +EE++ R E
Sbjct: 518 PSYRRTPESELRLACSARDELCHSVLNDEWASHPTWASEDNTYFTTHKKNSFEEAMHRSE 577

Query: 568 DDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TALNLRCIERLY 623
           ++R E  + LE ++     +E L  +I + T       R+   F      +  R ++++Y
Sbjct: 578 EERHEYWVQLEGLSRLLSLLEPLNARIEDLTNDERASFRLRPDFGGPSKGIYYRILKKVY 637

Query: 624 GDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRS 683
           G+   +V+  L+   S+A+PV+LTRLK K +EW R + D+ K W +I SKN++KSLD++ 
Sbjct: 638 GNSANEVIHALQDCPSIAVPVVLTRLKLKDDEWRRAQRDWAKAWRDIDSKNFYKSLDYQ- 696

Query: 684 FYFKQQDSKSLGAKALSAEIKEI-SEKKRKEDDVLLAIAAGNRRSIVP--HLEFEYSDPD 740
               + D K+   K   A I+ + +E+KR  D       +    +  P   L+ E+ D D
Sbjct: 697 LGNAKGDRKTSPVKQAVAAIESLKTEQKRAYDK-----QSRPSFTFAPDHQLKLEFHDVD 751

Query: 741 IHEDLYQLIKYSCGEMCTTEQLDKVMKIWTTFLEPML 777
           +  D  +L  YS  E  + +   +  +   +FL+  +
Sbjct: 752 LVRDALRLT-YSFVEHLSAQYSPQERRAVESFLQAFI 787



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 47/85 (55%), Positives = 58/85 (68%)

Query: 39  GAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHR 98
             + L   DAL+YL AVK  FQDK + Y+ FL++MKDFK++ IDT GVI RV  LF G+R
Sbjct: 26  AGRPLNVTDALSYLDAVKIQFQDKPDVYNHFLDIMKDFKSEVIDTPGVIERVSMLFHGNR 85

Query: 99  DLILGFNTFLPKGYEITLPLEDEQP 123
           DLI GFNTFLP GY I   ++   P
Sbjct: 86  DLIQGFNTFLPPGYRIETSVDPRDP 110



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 75/296 (25%), Positives = 125/296 (42%), Gaps = 45/296 (15%)

Query: 130 EFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI--TEVYQEVEALFQDHPDLL 187
           EF  AI ++NKIK  +  D   YK FL+IL  Y+KE + +  ++VY +V+ LF+D P+LL
Sbjct: 209 EFNHAIQYLNKIKAHYSDDPDTYKQFLEILQTYQKEQRHLQDSQVYVQVQMLFKDAPELL 268

Query: 188 EEFTHFLPDSSGAASIHYVPSGRNSILRDRSS----AMPTARQVHVDKKERAMASHADRD 243
            EF  FLP+ + A +    P G   IL    +    A+P         +  +  S+  +D
Sbjct: 269 AEFKDFLPEVTNAFA---GPVGVVGILPHPVTGPGMAIPWG-------QPESGPSNDKQD 318

Query: 244 LSVDRPDPDHDRVLLKSDKDQRRRGEKERERRDDHRRERERDDRDFENDVNRDFSMQRFP 303
            S  R           +   ++RRG  E+E       +    +R   + +N   +    P
Sbjct: 319 RSAKR---------TTAAAKRKRRGVAEKELTPAPPAKPSAGNRSKRSKINHKPADPESP 369

Query: 304 HKRKSARKIEDSTAEPLHQGGEGDENFGMHPVSSSYDDK---------NAMKSMFSQELS 354
                      ++  P+H       +    P + +              A ++     L 
Sbjct: 370 PYPTYGLP---ASPSPMHPTMHPQSHIVSAPAAQAQSTSLLAVPVPIDPAEQAGSKDNLV 426

Query: 355 FCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLV------GDLLGRYPDLM 402
           F E+ K  L     Y EFL+ L+LY+K+II    L  +       GD+L ++ D++
Sbjct: 427 FLERAKAMLEHQKIYDEFLKLLNLYSKDIIDPKTLIEMAQAFLGEGDMLAQFKDVV 482



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 45/87 (51%)

Query: 109 PKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKS 168
           P+  E TL +        +P+   +A+++++ +K +FQ    VY  FLDI+  ++ E   
Sbjct: 10  PRANEETLNMSQRTSEAGRPLNVTDALSYLDAVKIQFQDKPDVYNHFLDIMKDFKSEVID 69

Query: 169 ITEVYQEVEALFQDHPDLLEEFTHFLP 195
              V + V  LF  + DL++ F  FLP
Sbjct: 70  TPGVIERVSMLFHGNRDLIQGFNTFLP 96



 Score = 42.4 bits (98), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 19/113 (16%)

Query: 17  PMISSRGEPSGQTQ-------------VVGGGGGGGAQKLTT----NDALAYLKAVKDIF 59
           P  +  G PS + Q             ++G   G  AQ+  +    N A+ YL  +K  +
Sbjct: 165 PYTAPTGHPSHEIQSGYHVASATDAASLLGNLNGKTAQENKSAGEFNHAIQYLNKIKAHY 224

Query: 60  QDKREKYDDFLEVMKDF-KAQR-IDTAGVIARVKELFKGHRDLILGFNTFLPK 110
            D  + Y  FLE+++ + K QR +  + V  +V+ LFK   +L+  F  FLP+
Sbjct: 225 SDDPDTYKQFLEILQTYQKEQRHLQDSQVYVQVQMLFKDAPELLAEFKDFLPE 277


>gi|19114558|ref|NP_593646.1| Clr6 histone deacetylase complex subunit Pst2 [Schizosaccharomyces
           pombe 972h-]
 gi|12230513|sp|O13919.1|PST2_SCHPO RecName: Full=Paired amphipathic helix protein pst2; AltName:
           Full=SIN3 homolog 2
 gi|2330779|emb|CAB11171.1| Clr6 histone deacetylase complex subunit Pst2 [Schizosaccharomyces
           pombe]
          Length = 1075

 Score =  110 bits (274), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 107/410 (26%), Positives = 185/410 (45%), Gaps = 58/410 (14%)

Query: 343 NAMKSMFSQELSFCEKVKDKLRDDYQEFLRC---LHLYTKEIITRSELQSLVGDLLGRYP 399
           N +   + + + F  +V+  L  + ++F +    L  +     + SELQ++V  LL  +P
Sbjct: 136 NDLPCTYHRAIGFVSRVRRALLSNPEQFFKLQDSLRKFKNSECSLSELQTIVTSLLAEHP 195

Query: 400 DLMDGFNGFLA----------------RCEKSEEL----LADVMSKK---------SLWN 430
            L   F+ FL                 R  +S +     ++D++S+           L N
Sbjct: 196 SLAHEFHNFLPSSIFFGSKPPLGSFPLRGIQSSQFTLSNISDLLSQSRPDNLSPFSHLSN 255

Query: 431 EGR-IPKSVKVEDRDRDRDRE-------RDDGVKDRDREAREKDRLDKSVAFVNKDVGPK 482
           E     K+VK    D +   E          G+ DR+        + +   F+  + G  
Sbjct: 256 ESSDFFKNVKNVLTDVETYHEFLKLLNLYVQGIIDRN------ILVSRGFGFLKSNSGLW 309

Query: 483 MSMYS----SKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDH 538
            S  S    S +++L+  +     S+   C PSYRLLP      S S R +    +LND 
Sbjct: 310 RSFLSLTSLSPEEFLS--VYNSACSDFPECGPSYRLLPVEERNISCSGRDDFAWGILNDD 367

Query: 539 WVS-VTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNN 597
           WVS  T  SE+  F   RK  YEE++ + E++R+E D  +E+ + T K ++++  +IN  
Sbjct: 368 WVSHPTWASEESGFIVQRKTPYEEAMTKLEEERYEFDRHIEATSWTIKSLKKIQNRINEL 427

Query: 598 TIKTDGPIRVEDHF----TALNLRCIERLY-GDHGLDVMDVLRKNASLALPVILTRLKQK 652
             +      +E+       ++  + I+ +Y  +H  ++   L +   L LP++++RL++K
Sbjct: 428 PEEERETYTLEEGLGLPSKSIYKKTIKLVYTSEHAEEMFKALERMPCLTLPLVISRLEEK 487

Query: 653 QEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAE 702
            EEW   +      W  I  KNY KSLD +  YFK +D K++ +K L AE
Sbjct: 488 NEEWKSVKRSLQPGWRSIEFKNYDKSLDSQCVYFKARDKKNVSSKFLLAE 537



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/190 (23%), Positives = 77/190 (40%), Gaps = 21/190 (11%)

Query: 28  QTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVI 87
           Q Q+V      G   L   D  A+++ +      +   Y  F++V+K    + +D  G I
Sbjct: 20  QNQLVHDFSPNGT-ALPELDIKAFVQKLGQRLCHRPYVYSAFMDVVKALHNEIVDFPGFI 78

Query: 88  ARVKELFKGHRDLILGFNTFLPKGYE---------ITLPLEDEQPPPKKP---------- 128
            R+  + + + DL+   N FLP  Y+          TL       P   P          
Sbjct: 79  ERISVILRDYPDLLEYLNIFLPSSYKYLLSNSGANFTLQFTTPSGPVSTPSTYVATYNDL 138

Query: 129 -VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLL 187
              +  AI FV++++     +   +    D L  ++    S++E+   V +L  +HP L 
Sbjct: 139 PCTYHRAIGFVSRVRRALLSNPEQFFKLQDSLRKFKNSECSLSELQTIVTSLLAEHPSLA 198

Query: 188 EEFTHFLPDS 197
            EF +FLP S
Sbjct: 199 HEFHNFLPSS 208


>gi|357444327|ref|XP_003592441.1| Paired amphipathic helix protein Sin3b [Medicago truncatula]
 gi|355481489|gb|AES62692.1| Paired amphipathic helix protein Sin3b [Medicago truncatula]
          Length = 177

 Score =  109 bits (273), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 59/152 (38%), Positives = 93/152 (61%)

Query: 45  TNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGF 104
            +DA   +K V+ +FQDKRE Y++F+++++DF A+RID   V   V EL K H+DLIL F
Sbjct: 11  IDDARVLVKDVEAVFQDKREMYEEFVKLLQDFGAKRIDRRVVKEGVTELLKEHQDLILRF 70

Query: 105 NTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRK 164
           N FLP G+EI+LPL+D+     +    + A+ F+ ++K  F+     +  FL +L  Y+ 
Sbjct: 71  NIFLPPGHEISLPLDDDLQQRDRSALEDRAMAFLTEVKVTFEDKMEKFNEFLKLLADYQA 130

Query: 165 ENKSITEVYQEVEALFQDHPDLLEEFTHFLPD 196
           +   +  V + +  LF+DH +LL  F  FLP+
Sbjct: 131 KRIDVRVVKEGMMELFKDHKNLLSGFNTFLPE 162



 Score = 77.0 bits (188), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 35/72 (48%), Positives = 56/72 (77%)

Query: 48  ALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTF 107
           A+A+L  VK  F+DK EK+++FL+++ D++A+RID   V   + ELFK H++L+ GFNTF
Sbjct: 100 AMAFLTEVKVTFEDKMEKFNEFLKLLADYQAKRIDVRVVKEGMMELFKDHKNLLSGFNTF 159

Query: 108 LPKGYEITLPLE 119
           LP+G++I+L L+
Sbjct: 160 LPEGHKISLSLD 171


>gi|213404540|ref|XP_002173042.1| Clr6 histone deacetylase complex subunit Pst2 [Schizosaccharomyces
           japonicus yFS275]
 gi|212001089|gb|EEB06749.1| Clr6 histone deacetylase complex subunit Pst2 [Schizosaccharomyces
           japonicus yFS275]
          Length = 1139

 Score =  109 bits (272), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 71/209 (33%), Positives = 111/209 (53%), Gaps = 8/209 (3%)

Query: 510 PSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMRKNQYEESLFRCED 568
           PSYRLLPK+    + S R EL   V ND WVS  T  SE+  F   RK  YEE++ + E+
Sbjct: 394 PSYRLLPKSEQTVACSGRDELAWSVCNDAWVSHPTWASEEAGFIVQRKTPYEETMTKLEE 453

Query: 569 DRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TALNLRCIERLYG 624
            R+E D  +E+   T   +E + E+I + + K    +++         ++  + ++ +Y 
Sbjct: 454 QRYEFDRHIEATTWTINLLEPIAERIESMSDKERAEMKLSPGLGGKTVSIYEKVVKWIYT 513

Query: 625 -DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRS 683
            + G D++  L +  S+A+P++L R+KQK EEW   R   +  W +I  +NY K +D +S
Sbjct: 514 PELGNDMIKGLYETPSIAVPLVLNRVKQKDEEWRALRDSLSASWRDIEYQNYDKHMDPQS 573

Query: 684 FYFKQQDSKSLGAKAL--SAEIKEISEKK 710
            YFK  D K    K L  SAE++     K
Sbjct: 574 LYFKSADKKLTMPKFLFMSAEMQAFETAK 602



 Score = 57.0 bits (136), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 72/173 (41%), Gaps = 20/173 (11%)

Query: 51  YLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPK 110
           +LK + +   DK   Y +FLE++  +    ID  G + R+  LFK +  +++  NT LPK
Sbjct: 97  FLKKLSNELFDKPSIYYEFLEIVYSYLENIIDFFGFLERIYILFKEYPHILIALNTLLPK 156

Query: 111 GYEITL-PLEDEQPPPKKPV-------------------EFEEAINFVNKIKTRFQGDDH 150
            Y  +  PL+ E      P                    + +  I F   +  +      
Sbjct: 157 QYAFSYSPLDPENIALHTPTGRVHASSSSYSGTYPDPLSDVQRVIAFTTHLCQKLHKTPE 216

Query: 151 VYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASI 203
                   L + R  + S   V ++++A  + H  L +EF++FLP +   A+I
Sbjct: 217 KIHRIRQALQLLRNGSVSADSVTKQIQAQLKGHSRLQQEFSYFLPHALLFAAI 269


>gi|149036197|gb|EDL90863.1| rCG38713, isoform CRA_e [Rattus norvegicus]
          Length = 231

 Score =  109 bits (272), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 69/169 (40%), Positives = 86/169 (50%), Gaps = 44/169 (26%)

Query: 73  MKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPL-------------- 118
           MK+FK+Q IDT GVI RV +LF  H DLI+GFN FLP GY I +P               
Sbjct: 1   MKEFKSQSIDTPGVIRRVSQLFHEHPDLIVGFNAFLPLGYRIDIPKNGKLNIQSPLSNQD 60

Query: 119 ------------------ED--EQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDI 158
                             ED  + P     VEF  AI++VNKIKTRF     +Y+SFL+I
Sbjct: 61  NSHSHGDCGEDFKQMSYKEDRGQVPLESDSVEFNNAISYVNKIKTRFLDHPEIYRSFLEI 120

Query: 159 LNMYRKE----------NKSITEVYQEVEALFQDHPDLLEEFTHFLPDS 197
           L+ Y+KE            S  EV+ EV  LF+   DLL EF  FLP++
Sbjct: 121 LHTYQKEQLHTKGRPFRGMSEEEVFTEVANLFRGQEDLLSEFGQFLPEA 169



 Score = 48.9 bits (115), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 10/76 (13%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAG----------VIARVKELFK 95
           N+A++Y+  +K  F D  E Y  FLE++  ++ +++ T G          V   V  LF+
Sbjct: 94  NNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLHTKGRPFRGMSEEEVFTEVANLFR 153

Query: 96  GHRDLILGFNTFLPKG 111
           G  DL+  F  FLP+ 
Sbjct: 154 GQEDLLSEFGQFLPEA 169


>gi|357480503|ref|XP_003610537.1| Paired amphipathic helix protein Sin3 [Medicago truncatula]
 gi|355511592|gb|AES92734.1| Paired amphipathic helix protein Sin3 [Medicago truncatula]
          Length = 266

 Score =  109 bits (272), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 73/191 (38%), Positives = 101/191 (52%), Gaps = 13/191 (6%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFN 105
           +DA AY  AVK   Q   EKY +F EVM D++  RID  GV ARV ELFKGH+ LILG N
Sbjct: 11  DDACAYDNAVKSTCQ---EKYSEFAEVMSDYRDGRIDPGGVKARVHELFKGHKHLILGIN 67

Query: 106 TFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKE 165
             +PK YEI LP  DE+      V  ++A  F+ ++K  FQ     Y  FL +++ Y   
Sbjct: 68  NIMPKNYEIILPPSDEK------VNRQDATTFLKQVKVVFQDKMEKYYEFLQVIHDYMNL 121

Query: 166 NKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAAS--IHYVPSGRNSILRDRSSAMPT 223
              I +V +    LF+ H DLL  F +FLP+        +H    G   +++D  + +  
Sbjct: 122 TIDILDVIEIGMKLFKGHVDLLSGFNYFLPERYQITYPLLHDHKQGHQLVIKD--AFLNE 179

Query: 224 ARQVHVDKKER 234
            + V  DK E+
Sbjct: 180 VKAVFRDKLEK 190



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 59/156 (37%), Positives = 90/156 (57%), Gaps = 3/156 (1%)

Query: 41  QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDL 100
           +K+   DA  +LK VK +FQDK EKY +FL+V+ D+    ID   VI    +LFKGH DL
Sbjct: 83  EKVNRQDATTFLKQVKVVFQDKMEKYYEFLQVIHDYMNLTIDILDVIEIGMKLFKGHVDL 142

Query: 101 ILGFNTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILN 160
           + GFN FLP+ Y+IT PL  +     + V  ++A  F+N++K  F+     Y  FL ++ 
Sbjct: 143 LSGFNYFLPERYQITYPLLHDHKQGHQLV-IKDA--FLNEVKAVFRDKLEKYFEFLQLIT 199

Query: 161 MYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLPD 196
            ++ +      V   V+ LF++H +L+  F  FLP+
Sbjct: 200 DHKAQGIDTRGVVAIVKELFKEHRNLILGFNAFLPE 235



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 44/70 (62%), Positives = 55/70 (78%)

Query: 50  AYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLP 109
           A+L  VK +F+DK EKY +FL+++ D KAQ IDT GV+A VKELFK HR+LILGFN FLP
Sbjct: 175 AFLNEVKAVFRDKLEKYFEFLQLITDHKAQGIDTRGVVAIVKELFKEHRNLILGFNAFLP 234

Query: 110 KGYEITLPLE 119
           + + ITLP E
Sbjct: 235 EEHRITLPFE 244


>gi|242221661|ref|XP_002476574.1| predicted protein [Postia placenta Mad-698-R]
 gi|220724170|gb|EED78235.1| predicted protein [Postia placenta Mad-698-R]
          Length = 502

 Score =  109 bits (272), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 81/279 (29%), Positives = 114/279 (40%), Gaps = 87/279 (31%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQR---------------------- 80
           L   DA+ YL A+K  FQD+ E Y  FL++MKDF  Q                       
Sbjct: 220 LNVADAVDYLDAIKAQFQDRPEVYSHFLDIMKDFMYQVKDTSVRTSSFLRYDVIVCPYLD 279

Query: 81  ---IDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLEDEQP-------------- 123
              IDT GVIARV  LF     LI  FNTFLP GY I +  + + P              
Sbjct: 280 EWVIDTPGVIARVSMLFHSSPYLIQDFNTFLPPGYRIDVSTDPQNPGMVTVTTPTSVDVQ 339

Query: 124 -----PPKKPV-------------------------------------EFEEAINFVNKI 141
                PP  P                                      E   AI F+NKI
Sbjct: 340 YTTAFPPDYPFSPSIMFAPPAAGPQAVSAASFLGNLGNGTNEGMAAIGELNHAIQFLNKI 399

Query: 142 KTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAA 201
           K RF+ D   Y+ FL++++ Y +E    ++VY +V+ L +D PDL+ EF  F P++ G +
Sbjct: 400 KMRFEEDPETYEQFLEVVHAY-QERPQDSQVYAQVQTLLKDAPDLVNEFRDFWPEAIGPS 458

Query: 202 S-----IHYVPSGRNSILRDRSSAMPTARQVHVDKKERA 235
           S     ++      +SI R ++  +P   Q    +  R+
Sbjct: 459 SQRLRLLNQTVVQNSSIKRQQTPYIPVLGQSSASRPSRS 497


>gi|15220883|ref|NP_173793.1| amphipathic helix repeat-containing protein [Arabidopsis thaliana]
 gi|4056463|gb|AAC98036.1| F5O8.36 [Arabidopsis thaliana]
 gi|332192313|gb|AEE30434.1| amphipathic helix repeat-containing protein [Arabidopsis thaliana]
          Length = 241

 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 61/156 (39%), Positives = 85/156 (54%), Gaps = 24/156 (15%)

Query: 44  TTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILG 103
           T +DA +YL AVK+ F D+  KY++ L+++ DFKA+R++ A VIARV+EL K H +L+ G
Sbjct: 106 TIDDATSYLIAVKEAFHDEPAKYEEMLKLLNDFKARRVNAASVIARVEELMKDHSNLLFG 165

Query: 104 FNTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGD-DHVYKSFLDILNMY 162
           F  FL                           +F  K+K +FQGD   V  S L I+ MY
Sbjct: 166 FCVFL-----------------------SATTSFTTKLKAKFQGDGSQVVDSVLQIMRMY 202

Query: 163 RKENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSS 198
            + NKS  + YQE+ AL Q H DL+ E +    D S
Sbjct: 203 GEGNKSKHDAYQEIVALVQGHDDLVMELSQIFTDPS 238


>gi|9802524|gb|AAF99726.1|AC004557_5 F17L21.6 [Arabidopsis thaliana]
          Length = 236

 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 65/163 (39%), Positives = 96/163 (58%), Gaps = 12/163 (7%)

Query: 44  TTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILG 103
           T +DA++Y+  VK+ F D+  KY +F ++  D +   ID AG I RV+EL K H++L++ 
Sbjct: 78  TIDDAVSYINTVKEAFHDEPAKYYEFFQLFYDIRL--IDVAGGITRVEELLKAHKNLLVR 135

Query: 104 FNTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDD-HVYKSFLDILNMY 162
            N FLP   +  L L+ EQ       + +   +F+ K+K RFQGDD HVY+SFL+IL MY
Sbjct: 136 LNAFLPPEAQRILHLKIEQRAASDINKRKRVASFIGKLKERFQGDDRHVYESFLEILTMY 195

Query: 163 RKENKSITEVYQEVEALFQDHPDLLEEFTHFL---PDSSGAAS 202
           ++ NKS+ ++YQE       H DL+  F        D SG+ S
Sbjct: 196 QEGNKSVNDLYQE------GHEDLVMGFADVFKRPTDPSGSKS 232



 Score = 49.3 bits (116), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 36/145 (24%), Positives = 67/145 (46%), Gaps = 8/145 (5%)

Query: 55  VKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEI 114
           +++++ D+ EK++  L +++D+   R D A + A + EL + H +L++ F  F P   E 
Sbjct: 1   MEEVYHDEPEKFNHILHLIRDYFNHRDDRARITACMGELMRDHLNLLVRFFDFFPA--EA 58

Query: 115 TLPLEDEQPPPKKPVE----FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSIT 170
           +  L   Q      V      ++A++++N +K  F  +   Y  F  +   Y      + 
Sbjct: 59  SEGLAQLQTIAATSVSPDSTIDDAVSYINTVKEAFHDEPAKYYEFFQLF--YDIRLIDVA 116

Query: 171 EVYQEVEALFQDHPDLLEEFTHFLP 195
                VE L + H +LL     FLP
Sbjct: 117 GGITRVEELLKAHKNLLVRLNAFLP 141


>gi|357438251|ref|XP_003589401.1| SIN3 component histone deacetylase complex [Medicago truncatula]
 gi|355478449|gb|AES59652.1| SIN3 component histone deacetylase complex [Medicago truncatula]
          Length = 134

 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 69/158 (43%), Positives = 78/158 (49%), Gaps = 58/158 (36%)

Query: 77  KAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLEDEQPPPKKPVEFEEAIN 136
           K  R+DT GVI RVKELF+GHRDLILGFNTFLPKG+EITL L                  
Sbjct: 17  KTVRVDTDGVIERVKELFRGHRDLILGFNTFLPKGHEITLCLRMSN-------------- 62

Query: 137 FVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLPD 196
                                        NKS T VY+EV AL+Q+HPD           
Sbjct: 63  ----------------------------LNKSNTLVYKEVAALYQNHPD----------- 83

Query: 197 SSGAASIHYVPSGRNSILRDRSSAMPTARQVHVDKKER 234
              AAS H     RNS+ RDRSSAMPT R+V V+K  R
Sbjct: 84  ---AASTH--AFARNSMFRDRSSAMPTLRRVQVEKSTR 116


>gi|428164786|gb|EKX33800.1| hypothetical protein GUITHDRAFT_81137 [Guillardia theta CCMP2712]
          Length = 169

 Score =  108 bits (270), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 60/157 (38%), Positives = 89/157 (56%), Gaps = 12/157 (7%)

Query: 41  QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDL 100
           Q +   DAL YL  V+  F  +   Y+ FL +MK+FK+Q I T+ V A+V +LF GH+DL
Sbjct: 4   QSIQEYDALEYLNQVRLRFAHEPPVYNAFLNIMKEFKSQEISTSAVTAKVSKLFAGHQDL 63

Query: 101 ILGFNTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILN 160
           + GFN FLP   ++               + + A  +V +I+ RF+   +VY+ FL++L 
Sbjct: 64  VQGFNNFLPPAEQV-----------GSDTDRDSAFTYVARIRARFEHRPNVYREFLEVLQ 112

Query: 161 MYRKENKSITEVYQEVEA-LFQDHPDLLEEFTHFLPD 196
            Y++    I+ V  EV   LF  HPDLL +F+ FLPD
Sbjct: 113 KYKQNVYDISRVKGEVVTRLFDGHPDLLRQFSIFLPD 149



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 46/77 (59%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           K+ ++  +A+ ++N+++ RF  +  VY +FL+I+  ++ +  S + V  +V  LF  H D
Sbjct: 3   KQSIQEYDALEYLNQVRLRFAHEPPVYNAFLNIMKEFKSQEISTSAVTAKVSKLFAGHQD 62

Query: 186 LLEEFTHFLPDSSGAAS 202
           L++ F +FLP +    S
Sbjct: 63  LVQGFNNFLPPAEQVGS 79


>gi|357455609|ref|XP_003598085.1| Paired amphipathic helix protein Sin3a [Medicago truncatula]
 gi|355487133|gb|AES68336.1| Paired amphipathic helix protein Sin3a [Medicago truncatula]
          Length = 699

 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/161 (42%), Positives = 92/161 (57%), Gaps = 6/161 (3%)

Query: 41  QKLTTNDALAYLKAVKDIF-QDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRD 99
           +KL+  DAL+ L AVK  F  +KREKY  FL++MKDFKA+RID   V  RV EL  GH D
Sbjct: 83  KKLSVGDALSLLAAVKRRFGYEKREKYGSFLQIMKDFKAERIDARDVKLRVYELLDGHED 142

Query: 100 LILGFNTFLPKGYEITLPLEDEQPPPK----KPVEFEEAINFVNKIKTRFQGDDH-VYKS 154
           LI  FN FLP  YEI LPL+ +    +    + +E ++A  F+ K+K  F   +   Y  
Sbjct: 143 LISRFNIFLPTEYEIKLPLDRDDDDDEQQEGRMLETKDAFAFLEKVKDVFHDKNREKYDE 202

Query: 155 FLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLP 195
           FL+I+  ++     I+ V   V  LFQ H DL+     FLP
Sbjct: 203 FLEIVKDFKFRRIDISVVAARVNELFQGHTDLIFGVNAFLP 243



 Score = 99.4 bits (246), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 48/78 (61%), Positives = 59/78 (75%), Gaps = 1/78 (1%)

Query: 43  LTTNDALAYLKAVKDIFQDK-REKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLI 101
           L T DA A+L+ VKD+F DK REKYD+FLE++KDFK +RID + V ARV ELF+GH DLI
Sbjct: 176 LETKDAFAFLEKVKDVFHDKNREKYDEFLEIVKDFKFRRIDISVVAARVNELFQGHTDLI 235

Query: 102 LGFNTFLPKGYEITLPLE 119
            G N FLPK Y IT  ++
Sbjct: 236 FGVNAFLPKKYRITTSVQ 253


>gi|357455607|ref|XP_003598084.1| Paired amphipathic helix protein Sin3 [Medicago truncatula]
 gi|355487132|gb|AES68335.1| Paired amphipathic helix protein Sin3 [Medicago truncatula]
          Length = 546

 Score =  107 bits (266), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 70/162 (43%), Positives = 93/162 (57%), Gaps = 10/162 (6%)

Query: 41  QKLTTNDALAYLKAVKDIF-QDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRD 99
           +KL+  DAL+ L AVK  F  +KREKY  FL++MKDFKA+RID   V  RV EL  GH D
Sbjct: 2   KKLSVGDALSLLAAVKRRFGYEKREKYGSFLQIMKDFKAERIDARDVKLRVYELLDGHED 61

Query: 100 LILGFNTFLPKGYEITLPLE------DEQPPPKKPVEFEEAINFVNKIKTRFQG-DDHVY 152
           LI  FN FLP  YEI LPL+      D+Q    + +E ++A  F+ K+K  F G ++  Y
Sbjct: 62  LISKFNIFLPAEYEIKLPLDRDDDHVDQQEG--RMLETKDASAFLEKVKDMFDGKNEEKY 119

Query: 153 KSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFL 194
             FL+I+  ++     I+        LFQ H DL+  F  FL
Sbjct: 120 HEFLEIVKDFKIGRIDISVTAARGNELFQGHTDLILGFNAFL 161



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 46/77 (59%), Positives = 54/77 (70%), Gaps = 2/77 (2%)

Query: 43  LTTNDALAYLKAVKDIFQDKRE-KYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLI 101
           L T DA A+L+ VKD+F  K E KY +FLE++KDFK  RID +   AR  ELF+GH DLI
Sbjct: 95  LETKDASAFLEKVKDMFDGKNEEKYHEFLEIVKDFKIGRIDISVTAARGNELFQGHTDLI 154

Query: 102 LGFNTFLPKGYEITLPL 118
           LGFN FL K Y IT PL
Sbjct: 155 LGFNAFLAKKYRIT-PL 170


>gi|392560499|gb|EIW53682.1| hypothetical protein TRAVEDRAFT_40224 [Trametes versicolor
           FP-101664 SS1]
          Length = 1044

 Score =  107 bits (266), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 74/241 (30%), Positives = 129/241 (53%), Gaps = 21/241 (8%)

Query: 487 SSKDKYLAKPIQELDLSNCERCTP---SYRLLPKNYLIPSASQRTELGAEVLNDHWVS-V 542
           +++++   +P+  LD  + E+      S+R LP + +    S R E+   VLND W+S  
Sbjct: 352 AAEEEVWTRPMGALDRPSREQLHTRYGSFRKLPAHEVHVQCSGRDEMCNAVLNDEWISQP 411

Query: 543 TSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTD 602
           T   ED  F   +KN YEE+L   E++R E D  +E+++ T + +E L  KI   T K  
Sbjct: 412 TFAIEDAGFIAHKKNIYEETLHHSEEERHEYDFHIEAIHRTIQVLEPLNNKIAQLTPKER 471

Query: 603 GPIRVEDHF----TALNLRCIERLYG-DHGLDVMDVLRKNASLALPVILTRLKQKQEEWA 657
              +++ +      A++ R I+++Y  D GL+V   +++  + A+PV     K+ Q EW 
Sbjct: 472 ANFKLKPNLGGVGKAIHQRVIKKIYRRDTGLEVWTAMQEVPATAIPV-----KRTQREW- 525

Query: 658 RCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVL 717
                 +KVW E+  +NYHKSLDH++  FK  D K++  K   ++I+   +++R +   L
Sbjct: 526 ------DKVWREVDLRNYHKSLDHQAVTFKAADKKAVTQKVFVSQIEAARDEQRVKRAAL 579

Query: 718 L 718
           +
Sbjct: 580 I 580


>gi|357455601|ref|XP_003598081.1| Paired amphipathic helix protein Sin3 [Medicago truncatula]
 gi|355487129|gb|AES68332.1| Paired amphipathic helix protein Sin3 [Medicago truncatula]
          Length = 520

 Score =  106 bits (264), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 65/160 (40%), Positives = 92/160 (57%), Gaps = 5/160 (3%)

Query: 41  QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDL 100
           +K T  DALA   AVK   Q   EKY+ F +++ DFK + IDT  V  RV ELFKGH DL
Sbjct: 2   KKRTRGDALALFAAVK---QKSMEKYESFAQIVLDFKGENIDTRVVKLRVYELFKGHEDL 58

Query: 101 ILGFNTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDH-VYKSFLDIL 159
           IL FNTF+   YEI LP  D      + +E ++A++F+ K+K  F G +   Y  FL ++
Sbjct: 59  ILRFNTFVTTEYEIKLP-SDHDNDESRRLEIKDALSFLKKVKDTFLGKNRKKYAEFLKLM 117

Query: 160 NMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSG 199
             ++      + V + V+ LF+ H DL+  F +FLP + G
Sbjct: 118 KDFKACRIDTSGVAERVKDLFKGHTDLILGFNNFLPKTYG 157



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 53/91 (58%), Positives = 66/91 (72%), Gaps = 1/91 (1%)

Query: 40  AQKLTTNDALAYLKAVKDIFQDK-REKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHR 98
           +++L   DAL++LK VKD F  K R+KY +FL++MKDFKA RIDT+GV  RVK+LFKGH 
Sbjct: 83  SRRLEIKDALSFLKKVKDTFLGKNRKKYAEFLKLMKDFKACRIDTSGVAERVKDLFKGHT 142

Query: 99  DLILGFNTFLPKGYEITLPLEDEQPPPKKPV 129
           DLILGFN FLPK Y  TL  + +    KK V
Sbjct: 143 DLILGFNNFLPKTYGNTLRPQLDTGSKKKKV 173


>gi|47230705|emb|CAF99898.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1185

 Score =  105 bits (263), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 53/110 (48%), Positives = 69/110 (62%), Gaps = 6/110 (5%)

Query: 17  PMISSRGEPSGQ------TQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFL 70
           P + S+G    Q      T +    G    Q+L   DAL+YL  VK  F +K + Y+DFL
Sbjct: 87  PTVQSQGPTVVQGPVHPPTSITSTQGQQQFQRLKVEDALSYLDQVKLQFGNKPQVYNDFL 146

Query: 71  EVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLED 120
           ++MK+FK+Q IDT GVI RV +LFKGH DLI+GFNTFLP GY+I +   D
Sbjct: 147 DIMKEFKSQSIDTPGVINRVSQLFKGHPDLIMGFNTFLPPGYKIEVQTND 196



 Score = 90.1 bits (222), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 41/74 (55%), Positives = 52/74 (70%)

Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQ 558
           E+D ++C+R  PSYR LPK+Y  P  + RT L  EVLND WVS  S SED +F   +K Q
Sbjct: 596 EIDYASCKRLGPSYRALPKSYQQPKCTGRTPLCREVLNDTWVSFPSWSEDSTFVSSKKTQ 655

Query: 559 YEESLFRCEDDRFE 572
           YEE ++RCED+RFE
Sbjct: 656 YEEHIYRCEDERFE 669



 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 40/87 (45%), Positives = 55/87 (63%), Gaps = 13/87 (14%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI-------------TEVY 173
           +PVEF  AIN+VNKIK RFQG   +YK+FL+IL+ Y+KE ++               EVY
Sbjct: 336 QPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVY 395

Query: 174 QEVEALFQDHPDLLEEFTHFLPDSSGA 200
            +V  LF++  DLL EF  FLPD++ +
Sbjct: 396 TQVARLFKNQEDLLSEFGQFLPDANSS 422



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 33/77 (42%), Positives = 46/77 (59%), Gaps = 2/77 (2%)

Query: 341 DKNAMKSMFSQELSFCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRY 398
           D +  K   S E  F EKV+  LR  + Y  FLRCLH++++E+I+R+EL  LV   LG++
Sbjct: 498 DHDVSKHSTSTETMFFEKVRKALRSSEAYDNFLRCLHIFSQELISRAELVQLVIPFLGKF 557

Query: 399 PDLMDGFNGFLARCEKS 415
           P+L   F  FL   E S
Sbjct: 558 PELFSWFKNFLGYRESS 574



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/95 (28%), Positives = 48/95 (50%), Gaps = 14/95 (14%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           ++ E+A+++++++K +F     VY  FLDI+  ++ ++     V   V  LF+ HPDL+ 
Sbjct: 119 LKVEDALSYLDQVKLQFGNKPQVYNDFLDIMKEFKSQSIDTPGVINRVSQLFKGHPDLIM 178

Query: 189 EFTHFLP-------------DSSGAASIHYV-PSG 209
            F  FLP             + +    IHY+ P G
Sbjct: 179 GFNTFLPPGYKIEVQTNDLVNVTTPGQIHYITPHG 213


>gi|384489662|gb|EIE80884.1| hypothetical protein RO3G_05589 [Rhizopus delemar RA 99-880]
          Length = 1198

 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 51/103 (49%), Positives = 64/103 (62%), Gaps = 2/103 (1%)

Query: 12  SQIKRPMISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLE 71
           + +  P+ ++   P+   Q     GGGG + L   DAL YL  VK  F D+ + Y+ FL+
Sbjct: 121 APVPPPLAANPPVPASSPQT--NTGGGGYRPLNVRDALTYLDQVKVRFSDQPDVYNRFLD 178

Query: 72  VMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEI 114
           +MKDFK+Q IDT GVI RV  LFKGH  LI GFNTFLP GY I
Sbjct: 179 IMKDFKSQAIDTPGVIERVSALFKGHPTLISGFNTFLPPGYRI 221



 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 147/283 (51%), Gaps = 35/283 (12%)

Query: 483 MSMYSSKDKYLAKP---IQELDLSNCERC-----TPSYRLLPKNYLIPSASQRTELGAEV 534
           M  Y  K+  + KP   I + DL+ C+       +PSYR++PK +     S R +L  EV
Sbjct: 559 MIGYEPKEHPIEKPANTIPKPDLNTCQTTGNPHESPSYRVVPKEWQNQPCSGRDQLCWEV 618

Query: 535 LNDHWVS-VTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEK 593
           LND +VS     SE+  F   +K+QYEE++ RCE++R++ +M +++       +E +  +
Sbjct: 619 LNDEYVSHPIWASEEDGFVASKKSQYEEAMHRCEEERYDYNMNIDANLNVIALLEPIAHR 678

Query: 594 INNNTIKTDGPIRVEDHFTALNL----RCIERLY-GDHGLDVMDVLRKNASLALPVILTR 648
           I   T +     R+       ++    R I+++Y  + GL+++++L  N +  +P++L R
Sbjct: 679 IEQMTPEEKSNFRLRPGLGGQSVTIYERIIKKIYDKERGLEIIELLYSNPAQVVPILLRR 738

Query: 649 LKQKQEEWARCRSDFNKVWAEIYSKN--YHKSLDHRSFYFKQQDSKSLGAKALSAEIKEI 706
           LKQK EEW R         A+++  N  Y++ +      FK  D K++  KAL  EI+ I
Sbjct: 739 LKQKDEEWKR---------AQVHENNASYYQGIT-----FKSNDRKAMAPKALVGEIENI 784

Query: 707 SEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLI 749
            ++K+K+  +       N +       F++ D ++ +D+ ++I
Sbjct: 785 LQEKKKKKSLEEKTKKKNYQ-----FRFDFKDQELFKDVTRVI 822



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/75 (48%), Positives = 47/75 (62%), Gaps = 5/75 (6%)

Query: 128 PVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLL 187
           P+EF  AIN+      R+  D   YK FL+IL  Y+K+N+ I EVY  V+ LF   PDLL
Sbjct: 363 PLEFNHAINY-----NRYAHDPDTYKQFLEILQTYQKDNRPIQEVYTHVQYLFNGAPDLL 417

Query: 188 EEFTHFLPDSSGAAS 202
           EEF  FLPD +G ++
Sbjct: 418 EEFKQFLPDITGQSA 432



 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 39/69 (56%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDL 186
           +P+   +A+ +++++K RF     VY  FLDI+  ++ +      V + V ALF+ HP L
Sbjct: 148 RPLNVRDALTYLDQVKVRFSDQPDVYNRFLDIMKDFKSQAIDTPGVIERVSALFKGHPTL 207

Query: 187 LEEFTHFLP 195
           +  F  FLP
Sbjct: 208 ISGFNTFLP 216


>gi|355719430|gb|AES06598.1| SIN3-like protein A, transcription regulator [Mustela putorius
           furo]
          Length = 433

 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 45/74 (60%), Positives = 58/74 (78%)

Query: 41  QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDL 100
           Q+L   DAL+YL  VK  F  + + Y+DFL++MK+FK+Q IDT GVI+RV +LFKGH DL
Sbjct: 119 QRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDL 178

Query: 101 ILGFNTFLPKGYEI 114
           I+GFNTFLP GY+I
Sbjct: 179 IMGFNTFLPPGYKI 192



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 40/88 (45%), Positives = 55/88 (62%), Gaps = 13/88 (14%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI-------------TEVY 173
           +PVEF  AIN+VNKIK RFQG   +YK+FL+IL+ Y+KE ++               EVY
Sbjct: 306 QPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVY 365

Query: 174 QEVEALFQDHPDLLEEFTHFLPDSSGAA 201
            +V  LF++  DLL EF  FLPD++ + 
Sbjct: 366 AQVARLFKNQEDLLSEFGQFLPDANSSV 393



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 9/81 (11%)

Query: 124 PPKKPVE---------FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQ 174
           PP  PV+          E+A+++++++K +F     VY  FLDI+  ++ ++     V  
Sbjct: 107 PPVAPVQGQQQFQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVIS 166

Query: 175 EVEALFQDHPDLLEEFTHFLP 195
            V  LF+ HPDL+  F  FLP
Sbjct: 167 RVSQLFKGHPDLIMGFNTFLP 187


>gi|118360308|ref|XP_001013391.1| Ubiquitin carboxyl-terminal hydrolase family protein [Tetrahymena
           thermophila]
 gi|89295158|gb|EAR93146.1| Ubiquitin carboxyl-terminal hydrolase family protein [Tetrahymena
           thermophila SB210]
          Length = 2516

 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 72/204 (35%), Positives = 111/204 (54%), Gaps = 16/204 (7%)

Query: 495 KPIQELDLSNCERCTPSYRLLPKNYLIPS-ASQRTELGAEVLNDHWVSVTSGSEDYSFKH 553
           KP+ + D ++ ER T SY  +PK Y  P   S  TEL   VLN   V+V  G+E  +F  
Sbjct: 645 KPLNDFDFNHHERFTHSYVEMPKFY--PKYCSNSTELTRSVLNTSIVTVPQGTEHVTFSI 702

Query: 554 MRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF-T 612
           MRKNQYEE LF+ ED+++E D  ++      +R  +LLE++     + + P +       
Sbjct: 703 MRKNQYEEQLFKSEDEKYEYDHHIQMY----RRTIKLLEQVE----QCEDPEQCRRLMQQ 754

Query: 613 ALNLRCIERLYGD---HGLDVMDVLRKNASLALPVILTRLKQKQEEWARCR-SDFNKVWA 668
           A++L+ I  LY +      ++ ++L  N    + V L R++ K +E    + +   K W 
Sbjct: 755 AIDLKMIVCLYKNGSPEQQEICEILLSNPKKTVLVALERVRSKLKEIEEAKMNQARKQWH 814

Query: 669 EIYSKNYHKSLDHRSFYFKQQDSK 692
           E+  KN+H+SLDHRSF FK+ D K
Sbjct: 815 EVAEKNFHRSLDHRSFIFKRHDRK 838


>gi|50291569|ref|XP_448217.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49527528|emb|CAG61168.1| unnamed protein product [Candida glabrata]
          Length = 937

 Score =  103 bits (256), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 74/213 (34%), Positives = 106/213 (49%), Gaps = 14/213 (6%)

Query: 510 PSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMRKNQYEESLFRCED 568
           PSY+ L       S   R  L  EVLND WV      SE+  F   +KNQYEE+LF+ E+
Sbjct: 293 PSYKRLSGFETRASCHGRDRLCHEVLNDEWVGHPVWASEEVGFIAHKKNQYEETLFKVEE 352

Query: 569 DRFELDMLLESVNVTTKRVEELLEKINNNTIKTDG--------PIRVEDHFTALNLRCIE 620
           +R E D  L SV     +  E  + +  +  K DG        P        ++  + I 
Sbjct: 353 ERHEYDFFLLSVEHLIVKFTEYEKSLQLS--KDDGRRRNRVSSPKEPMISLNSITEKVIR 410

Query: 621 RLYG-DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSL 679
           RLYG +HG  ++D ++ N    +P IL   K+K ++W   ++++NK W E+  K Y+KSL
Sbjct: 411 RLYGIEHGNILIDAIKTNPEKVVPTILKTAKEKYQQWNSAKNEWNKAWREVEQKAYYKSL 470

Query: 680 DHRSFYFKQQDSKSLGAKALSAEIKEISEKKRK 712
           DH    FK  + + L  K L  E K  SEK+ K
Sbjct: 471 DHLGLPFKNAEKRFLNDKQLLLEYK--SEKQDK 501


>gi|426379862|ref|XP_004056606.1| PREDICTED: paired amphipathic helix protein Sin3a [Gorilla gorilla
           gorilla]
          Length = 842

 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 46/80 (57%), Positives = 60/80 (75%)

Query: 41  QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDL 100
           Q+L   DAL+YL  VK  F  + + Y+DFL++MK+FK+Q IDT GVI+RV +LFKGH DL
Sbjct: 119 QRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDL 178

Query: 101 ILGFNTFLPKGYEITLPLED 120
           I+GFNTFLP GY+I +   D
Sbjct: 179 IMGFNTFLPPGYKIEVQTND 198



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 41/79 (51%), Positives = 53/79 (67%)

Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQ 558
           E+D ++C+R   SYR LPK+Y  P  + RT L  EVLND WVS  S SED +F   +K Q
Sbjct: 545 EIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVSSKKTQ 604

Query: 559 YEESLFRCEDDRFELDMLL 577
           YEE ++RCED+RFE+   L
Sbjct: 605 YEEHIYRCEDERFEVQACL 623



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/88 (45%), Positives = 55/88 (62%), Gaps = 13/88 (14%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI-------------TEVY 173
           +PVEF  AIN+VNKIK RFQG   +YK+FL+IL+ Y+KE ++               EVY
Sbjct: 300 QPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVY 359

Query: 174 QEVEALFQDHPDLLEEFTHFLPDSSGAA 201
            +V  LF++  DLL EF  FLPD++ + 
Sbjct: 360 AQVARLFKNQEDLLSEFGQFLPDANSSV 387



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 39/58 (67%), Gaps = 2/58 (3%)

Query: 355 FCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLA 410
           F +KV+  LR  + Y+ FLRCL ++ +E+I+R+EL  LV   LG++P+L + F  FL 
Sbjct: 466 FFDKVRKALRSAEAYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPELFNWFKNFLG 523



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 9/81 (11%)

Query: 124 PPKKPVE---------FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQ 174
           PP  PV+          E+A+++++++K +F     VY  FLDI+  ++ ++     V  
Sbjct: 107 PPVAPVQGQQQFQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVIS 166

Query: 175 EVEALFQDHPDLLEEFTHFLP 195
            V  LF+ HPDL+  F  FLP
Sbjct: 167 RVSQLFKGHPDLIMGFNTFLP 187


>gi|357444323|ref|XP_003592439.1| SIN3 component histone deacetylase complex [Medicago truncatula]
 gi|355481487|gb|AES62690.1| SIN3 component histone deacetylase complex [Medicago truncatula]
          Length = 122

 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 49/76 (64%), Positives = 61/76 (80%)

Query: 47  DALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNT 106
           +ALA++  VK  FQDKREKY++FLE+MKDFKAQRIDT  V  RV ELFK H+ LI  FN 
Sbjct: 14  EALAFIMKVKYEFQDKREKYEEFLELMKDFKAQRIDTEAVKERVMELFKEHQYLISRFNI 73

Query: 107 FLPKGYEITLPLEDEQ 122
           F+P G+EI+LPL+D+Q
Sbjct: 74  FMPSGHEISLPLDDDQ 89



 Score = 40.0 bits (92), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 19/63 (30%), Positives = 34/63 (53%)

Query: 133 EAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTH 192
           EA+ F+ K+K  FQ     Y+ FL+++  ++ +      V + V  LF++H  L+  F  
Sbjct: 14  EALAFIMKVKYEFQDKREKYEEFLELMKDFKAQRIDTEAVKERVMELFKEHQYLISRFNI 73

Query: 193 FLP 195
           F+P
Sbjct: 74  FMP 76


>gi|357455621|ref|XP_003598091.1| Paired amphipathic helix protein Sin3 [Medicago truncatula]
 gi|355487139|gb|AES68342.1| Paired amphipathic helix protein Sin3 [Medicago truncatula]
          Length = 612

 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 66/160 (41%), Positives = 88/160 (55%), Gaps = 5/160 (3%)

Query: 41  QKLTTNDALAYLKAVKDIF-QDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRD 99
           +KL+  DAL+ L AVK  F  ++REKY  FL++MKDFKA+RID   V  RV EL  GH D
Sbjct: 85  KKLSVGDALSLLAAVKRRFGYEEREKYGSFLQIMKDFKAERIDARDVKLRVYELLDGHED 144

Query: 100 LILGFNTFLPKGYEITLPLEDEQPPPK---KPVEFEEAINFVNKIKTRFQG-DDHVYKSF 155
           LI  FN FLP  YEI LPL+ +    +     +  ++A  F+ K+K  F G ++  Y  F
Sbjct: 145 LISKFNIFLPTEYEIKLPLDRDDDDDELQGHMLATKDAFAFLEKVKDVFHGKNEEKYNEF 204

Query: 156 LDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLP 195
           L I   ++     I+        L Q H DL+  F  FLP
Sbjct: 205 LKIAKDFKAGRIDISVAAARGNELLQGHTDLILGFNAFLP 244



 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 45/78 (57%), Positives = 56/78 (71%), Gaps = 1/78 (1%)

Query: 43  LTTNDALAYLKAVKDIFQDKRE-KYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLI 101
           L T DA A+L+ VKD+F  K E KY++FL++ KDFKA RID +   AR  EL +GH DLI
Sbjct: 177 LATKDAFAFLEKVKDVFHGKNEEKYNEFLKIAKDFKAGRIDISVAAARGNELLQGHTDLI 236

Query: 102 LGFNTFLPKGYEITLPLE 119
           LGFN FLPK Y IT P++
Sbjct: 237 LGFNAFLPKKYRITPPVQ 254


>gi|224055932|ref|XP_002298703.1| hypothetical protein POPTRDRAFT_549847 [Populus trichocarpa]
 gi|222845961|gb|EEE83508.1| hypothetical protein POPTRDRAFT_549847 [Populus trichocarpa]
          Length = 595

 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 86/316 (27%), Positives = 128/316 (40%), Gaps = 115/316 (36%)

Query: 353 LSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLA 410
           + F EKVK +L  +  ++ FL+    Y+K  I ++EL  +V +L+G YPDLM  F  F  
Sbjct: 389 IGFFEKVKKRLPCEMSHKTFLKLFFYYSKGKIGKAELVKMVANLIGNYPDLMSDFYHFWR 448

Query: 411 RCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRLDK 470
            CE       +V+  +                           G K RDR  +++ R   
Sbjct: 449 NCES-----VNVLEVR---------------------------GCKARDRRRQKQSR--- 473

Query: 471 SVAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTEL 530
                                      +ELD S+C+R TP  RL                
Sbjct: 474 ---------------------------EELDFSSCKRSTPRRRL---------------- 490

Query: 531 GAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEEL 590
                                     N +E ++F+CED+++ELDML+E         EE+
Sbjct: 491 -------------------------PNHHERNVFKCEDEQYELDMLVEWFESAVMFAEEM 525

Query: 591 LEKINNNTIKTDGPIRVEDHFTA-LNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRL 649
                  T+K       E+  +  + LRCIERLYGD GL+++D+  K+   ALPV+  RL
Sbjct: 526 ----GGGTVKDK-----ENKMSGRIFLRCIERLYGDQGLEILDIFDKDPQRALPVLRLRL 576

Query: 650 KQKQEEWARCRSDFNK 665
           ++K EE  R R  F K
Sbjct: 577 QKKLEELIRYRQSFEK 592



 Score = 56.2 bits (134), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 88/186 (47%), Gaps = 27/186 (14%)

Query: 48  ALAYLKAVKDIFQ--DKREKYDDFLEVMKDFKAQRIDTA----GVI-----------ARV 90
           AL Y K +K  FQ     EK      +++ F    +DTA    G++           ARV
Sbjct: 26  ALNYSKKLKAWFQYDQPEEKIRSLGRILEKF----MDTAAAHDGLVGGLTVVLENFSARV 81

Query: 91  KELFKGHRDLILGFNTFLPKGYEITLPLED----EQPPPKKPVEFEEAINFVNKIKTRFQ 146
           KE+  G+ DLI G N+FL   ++I+L +E+    E     K V   E ++FV K+  +  
Sbjct: 82  KEILGGNHDLIGGLNSFLRPEFQISLDVEEKKETEPAMESKTVGDGERMDFVKKLDGKCG 141

Query: 147 GDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYV 206
            D  V  + L    + ++ + S+ +V      + + HPDLL +F + +P +      +Y+
Sbjct: 142 KD--VCGALLKNFRLRKEGSMSLADVCDFGHRVTEGHPDLLLDFLYSMPITEATPLAYYL 199

Query: 207 PSGRNS 212
           P  ++S
Sbjct: 200 PGLKSS 205



 Score = 44.7 bits (104), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 2/75 (2%)

Query: 131 FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEF 190
           F + ++F+NK+K +  G+D + K FL I  + +K ++++ +V+     L + H DL E+F
Sbjct: 264 FRQGMDFINKLKIKC-GEDGL-KKFLKIFKLLKKGSRTLVDVFDSGLKLTEGHGDLQEDF 321

Query: 191 THFLPDSSGAASIHY 205
             F+P S     + Y
Sbjct: 322 IKFMPLSELEKPLAY 336


>gi|164657967|ref|XP_001730109.1| hypothetical protein MGL_2491 [Malassezia globosa CBS 7966]
 gi|159104004|gb|EDP42895.1| hypothetical protein MGL_2491 [Malassezia globosa CBS 7966]
          Length = 934

 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 58/173 (33%), Positives = 96/173 (55%), Gaps = 12/173 (6%)

Query: 617 RCIERLYG-DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNY 675
           R I+++YG  HGL+V+  L  N  +A+P++L RLKQK EEW R + ++NKVW E+ ++N+
Sbjct: 25  RIIKKVYGRQHGLEVIAALHDNPCVAVPIVLARLKQKDEEWKRAQREWNKVWREVDARNF 84

Query: 676 HKSLDHRSFYFKQQDSKSLGAKALSAEIKEI---SEKKRKEDDVLLAIAAGNRRSIVPHL 732
           +K+LDH+   FK  D K++  KAL  EI+ +    +++R   D  L   A   +     L
Sbjct: 85  YKALDHQGVNFKSTDKKTITTKALVNEIESLVATQQQRRLTLDPSLPRLAPRYQ-----L 139

Query: 733 EFEYSDPDIHEDLYQLIKYSCGEMCTTEQLD---KVMKIWTTFLEPMLGVPSR 782
            F  +DP +  D+ +L+ +         Q     +V +++   L  MLG+  R
Sbjct: 140 SFAMNDPHVLADVLRLVAHYLDRPSAPFQPHDRARVRQVFKAMLSRMLGMERR 192


>gi|15223466|ref|NP_174045.1| paired amphipathic helix repeat-containing protein [Arabidopsis
           thaliana]
 gi|332192678|gb|AEE30799.1| paired amphipathic helix repeat-containing protein [Arabidopsis
           thaliana]
          Length = 222

 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 63/171 (36%), Positives = 89/171 (52%), Gaps = 27/171 (15%)

Query: 25  PSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTA 84
           P+G   VVG        + T  DA +YL +VK  F D+  KY++ L+++ D +A+R+D A
Sbjct: 74  PAGFQNVVGRSV---PPETTIEDATSYLNSVKRAFHDEPAKYEELLKLLNDIEARRVDAA 130

Query: 85  GVIARVKELFKGHRDLILGFNTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTR 144
             IA V+EL K H+ L+ GF+ FL                          + F+ K+K +
Sbjct: 131 SFIASVEELMKDHQTLLNGFSVFL-----------------------SAEMKFIRKLKAK 167

Query: 145 FQGD-DHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFL 194
           FQGD  HV  S L IL MY + NKS +E +QEV  L QDH DL+ E    +
Sbjct: 168 FQGDGSHVADSVLQILRMYSEGNKSKSEAFQEVVPLVQDHEDLVMELIKII 218


>gi|224055940|ref|XP_002298704.1| predicted protein [Populus trichocarpa]
 gi|222845962|gb|EEE83509.1| predicted protein [Populus trichocarpa]
          Length = 575

 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 85/316 (26%), Positives = 126/316 (39%), Gaps = 115/316 (36%)

Query: 353 LSFCEKVKDKL--RDDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLA 410
           + F E VK +L     ++ FL+    Y+K  I ++EL  +V +L+G YPDLM  F  F  
Sbjct: 369 IGFFENVKKRLPCEMSHKTFLKLFFYYSKGKIGKAELVKMVANLIGNYPDLMSDFYNFWR 428

Query: 411 RCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRLDK 470
            CE       +V+  +                           G K RDR  +++ R   
Sbjct: 429 NCES-----VNVLEVR---------------------------GCKARDRRRQKQSR--- 453

Query: 471 SVAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTEL 530
                                      +ELD S+C+R TP  RL                
Sbjct: 454 ---------------------------EELDFSSCKRSTPRRRL---------------- 470

Query: 531 GAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEEL 590
                                     N +E ++F+CED+++ELDML+E         EE+
Sbjct: 471 -------------------------PNHHERNVFKCEDEQYELDMLVEWFESAVMFAEEM 505

Query: 591 LEKINNNTIKTDGPIRVEDHFTA-LNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRL 649
                  T+K       E+  +  + LRCIERLYGD GL+++D+  K+   ALPV+  RL
Sbjct: 506 ----GGGTVKDK-----ENKMSGRIFLRCIERLYGDQGLEILDIFDKDPQRALPVLRLRL 556

Query: 650 KQKQEEWARCRSDFNK 665
           ++K EE  R R  F K
Sbjct: 557 QKKLEELIRYRQSFEK 572



 Score = 48.5 bits (114), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 89/187 (47%), Gaps = 41/187 (21%)

Query: 48  ALAYLKAVKDIFQ--DKREKYDDFLEVMKDFKAQRIDTA----GVI-----------ARV 90
           AL Y K +K  FQ     EK      +++ F    +DTA    G++           ARV
Sbjct: 26  ALNYSKKLKAWFQYDQPEEKIRSLGRILEKF----MDTAAAHDGLVGGLTVVLGNFSARV 81

Query: 91  KELFKGHRDLILGFNTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDH 150
           KE+  G+ DLI G N+FL   ++I+L +E+++       E E A+    + KT   G+  
Sbjct: 82  KEILGGNHDLIGGLNSFLRPEFQISLDVEEKK-------ETEPAM----ERKTVGDGESM 130

Query: 151 VYKSFLDILNMYRKE-NKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSG 209
            ++         RKE + S+ +V      + + HPDLL +F + +P +      +Y+P  
Sbjct: 131 DFR--------LRKEGSMSLADVCDFGHRVTEGHPDLLLDFLYSMPITQATPLAYYLPGL 182

Query: 210 RNSILRD 216
           ++S LR+
Sbjct: 183 KSSELRN 189



 Score = 43.1 bits (100), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 2/75 (2%)

Query: 131 FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEF 190
           F + ++F+NK+K +  G+D + K FL I  + +K ++++ +V+     L + H DL E+F
Sbjct: 244 FRQGMDFINKLKIKC-GEDGLEK-FLKIFKLLKKGSRTLVDVFDSGLKLTEGHGDLQEDF 301

Query: 191 THFLPDSSGAASIHY 205
             F+P S     + Y
Sbjct: 302 IKFMPLSELEKPLAY 316


>gi|384493567|gb|EIE84058.1| hypothetical protein RO3G_08763 [Rhizopus delemar RA 99-880]
          Length = 178

 Score =  100 bits (248), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 60/159 (37%), Positives = 81/159 (50%), Gaps = 29/159 (18%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
           L   DAL YL  VK  F  + + Y+ FL++MKDFK+Q +DT GVI RV  LF+G+  LI 
Sbjct: 18  LNVKDALTYLDKVKSKFATQPDIYNRFLDIMKDFKSQLVDTPGVIERVSSLFRGNPTLIS 77

Query: 103 GFNTFLPKGYEITLPLEDEQPPPKK-----------------------------PVEFEE 133
           GFNTFLP GY I   +++++    K                             P+E   
Sbjct: 78  GFNTFLPPGYSIECSIDEQERNIIKVITPSGTTTISDSELLNLGQDKTEQKETGPLEINH 137

Query: 134 AINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEV 172
           AI +V+K+K RF      YK FL+IL  Y+K    I +V
Sbjct: 138 AITYVHKVKNRFTDHPETYKRFLEILQTYQKGEIPIHKV 176



 Score = 50.8 bits (120), Expect = 0.004,   Method: Composition-based stats.
 Identities = 23/78 (29%), Positives = 44/78 (56%)

Query: 118 LEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVE 177
           L  EQ    +P+  ++A+ +++K+K++F     +Y  FLDI+  ++ +      V + V 
Sbjct: 7   LTTEQKDEIRPLNVKDALTYLDKVKSKFATQPDIYNRFLDIMKDFKSQLVDTPGVIERVS 66

Query: 178 ALFQDHPDLLEEFTHFLP 195
           +LF+ +P L+  F  FLP
Sbjct: 67  SLFRGNPTLISGFNTFLP 84


>gi|225457172|ref|XP_002280515.1| PREDICTED: paired amphipathic helix protein Sin3-like 3 [Vitis
           vinifera]
 gi|297733854|emb|CBI15101.3| unnamed protein product [Vitis vinifera]
          Length = 186

 Score =  100 bits (248), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 53/122 (43%), Positives = 73/122 (59%), Gaps = 3/122 (2%)

Query: 42  KLTTNDALAYLKAVKDIFQDKRE-KYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDL 100
           K T    + YLK V+D F  + + +Y  FL VMKD+K    DT  VI+ VKE+F+GH +L
Sbjct: 22  KRTIEQGVEYLKFVRDTFGSRNDSRYRGFLRVMKDYKGGIFDTLEVISLVKEMFEGHHEL 81

Query: 101 ILGFNTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILN 160
           + GFN  LP+GY I      + PP        EA+N VNKI+TR Q DD +Y+S +D++ 
Sbjct: 82  LTGFNILLPRGYSINSVAPTKDPPTALEARV-EAVNLVNKIRTRLQ-DDKLYRSLVDVMC 139

Query: 161 MY 162
            Y
Sbjct: 140 KY 141


>gi|378755886|gb|EHY65911.1| hypothetical protein NERG_00607 [Nematocida sp. 1 ERTm2]
          Length = 999

 Score =  100 bits (248), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 65/224 (29%), Positives = 105/224 (46%), Gaps = 48/224 (21%)

Query: 20  SSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQ 79
           S+ G P      +     GG+ K+   DA+ YL  VK+ +++ +E Y+ FL+ MKD+K +
Sbjct: 183 SNAGMPGPSNPAILMPEVGGSAKIQIKDAMRYLDVVKEEYKNNKEVYNKFLKTMKDYKDR 242

Query: 80  RIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITL----------PLEDEQP---PPK 126
            I+   VI  +  +F G++ LI GFN FLPK YEI            P  D+QP   PP+
Sbjct: 243 HINAKTVIEIMLSIFNGNQKLIQGFNQFLPKKYEILPSGEVKMHGERPDTDKQPKRMPPR 302

Query: 127 ------KPVEFE---------------------------EAINFVNKIKTRFQGDDHVYK 153
                 KP + +                             +N++NK++   + +   + 
Sbjct: 303 EYPPASKPPQMQYDPRRDLEGLGIGIKSQPARTDQDNMGRVVNYLNKVRKHLENNPVSWF 362

Query: 154 SFLDILNMYR--KENKSITEVYQEVEALFQDHPDLLEEFTHFLP 195
            FL I+  Y+  KE++ I E+   ++ L +D P L+ EF  FLP
Sbjct: 363 EFLRIVQSYKNSKEHRPIPEILASIKVLLKDDPVLISEFMVFLP 406



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 108/205 (52%), Gaps = 9/205 (4%)

Query: 511 SYRLLPKNYLIPSASQRTELGAEVLNDHWVSV-TSGSEDYSFKHMRKNQYEESLFRCEDD 569
           SYR+LP+ Y     + +T   A VLN  +V+  T  SE  +F   +KN +EE+LFR ED+
Sbjct: 509 SYRVLPEKYRQSMHTGQTPDDAAVLNTGYVACPTFSSESSTFIFAKKNAHEEALFRVEDE 568

Query: 570 RFELDMLLESVNVTTKRVEE----LLEKINNNTIKTDGPIRVEDHFTALNLRCIERLYGD 625
           R+E D+LLE V+    ++ E    ++   N +      P+ V    +AL+   I  +YG 
Sbjct: 569 RYECDVLLERVSSFILKLMEYEAIVIADANVSKEHNKCPLPVLK-LSALDKEIIGAVYGA 627

Query: 626 HGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFY 685
              D++  +  +   A+PV+L +L+  + +W + R+   ++W     +NY KSLD R + 
Sbjct: 628 SCDDIILGIISHPIRAIPVVLKQLRSVEAQWIKARTVSLEIWRSTVDRNYIKSLDVRGYK 687

Query: 686 FKQQDSKSLGAKALSAEI---KEIS 707
            +  + K+   K  + E+   KE+S
Sbjct: 688 IRSTERKTTLLKQFTKELDVSKEVS 712



 Score = 42.4 bits (98), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 39/171 (22%), Positives = 75/171 (43%), Gaps = 16/171 (9%)

Query: 33  GGGGGGGAQKLTTND-----ALAYLKAVKDIFQDKREKYDDFLEVMKDFK--AQRIDTAG 85
           G G G  +Q   T+       + YL  V+   ++    + +FL +++ +K   +      
Sbjct: 323 GLGIGIKSQPARTDQDNMGRVVNYLNKVRKHLENNPVSWFEFLRIVQSYKNSKEHRPIPE 382

Query: 86  VIARVKELFKGHRDLILGFNTFLPKGYEITLPLEDEQ--PPPKKPVEFEEAINFVNKIKT 143
           ++A +K L K    LI  F  FLP+  + ++     Q  PPP       ++++ +N I+T
Sbjct: 383 ILASIKVLLKDDPVLISEFMVFLPQQEKKSMRPGQRQLLPPPA------DSLSMLNDIRT 436

Query: 144 RFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFL 194
                  +YK F+  LNM+ +   +   +   VE   +    LL  F +++
Sbjct: 437 LLSRRG-IYKEFVKALNMFNQGLLNTNALLLIVEPFLRGSASLLSLFRYYI 486


>gi|224140831|ref|XP_002323782.1| hypothetical protein POPTRDRAFT_778307 [Populus trichocarpa]
 gi|222866784|gb|EEF03915.1| hypothetical protein POPTRDRAFT_778307 [Populus trichocarpa]
          Length = 532

 Score = 99.8 bits (247), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 60/144 (41%), Positives = 83/144 (57%), Gaps = 8/144 (5%)

Query: 532 AEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELL 591
           ++VLND  VSV S +EDYS     + Q ++ + +C+DDR E+DML        +  +EL 
Sbjct: 397 SQVLNDELVSVASRTEDYSSNIRSQKQRQQIMVQCKDDRDEIDMLFTWFKSAVEYADELG 456

Query: 592 EKINNNTIKTDGPIRVEDHFTALNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQ 651
           +   N+  K     R+  HF    LRC+ERLY D GL+V+DV  KN   ALP++  RLKQ
Sbjct: 457 D--GNDEGKVTKGKRI--HF----LRCVERLYNDQGLEVLDVFDKNPQHALPILRHRLKQ 508

Query: 652 KQEEWARCRSDFNKVWAEIYSKNY 675
           K EE    R D  K+W E+ S+ Y
Sbjct: 509 KLEELKHWRDDHEKLWDEVVSRVY 532



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/230 (27%), Positives = 107/230 (46%), Gaps = 26/230 (11%)

Query: 19  ISSRGEPSGQTQVVGGGGGGGA---------QKLTTNDALA--YLKAVKDIFQDKREKYD 67
           I+   + S + + + G G G A         +K   ND  A  YL  +   FQD+ E   
Sbjct: 41  INQNAKISSELEKLPGQGDGAAVYKLQKKMKRKRECNDKYATIYLNKLSARFQDQPENIQ 100

Query: 68  DFLEVMKDFKAQR-IDTAG--------VIARVKELFKGHRDLILGFNTFLPKGYEITLPL 118
            F  VM D       D +G         + R+  +F+GH DL+  FN+FLP  ++++L  
Sbjct: 101 GFKTVMADIIGHTDRDQSGRLKDIPDDTLDRIAAIFEGHDDLLRDFNSFLPPSHKLSLDD 160

Query: 119 EDEQPPPKKPVE----FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQ 174
           E+E+       E     ++A++F  K+    +G D  Y++FL  L   +  +++   VY+
Sbjct: 161 EEEENEADAAEEKEPGLKDALDFFKKVWI-LRGMD-FYEAFLRTLFPLKNGSRNPDYVYR 218

Query: 175 EVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTA 224
           +  AL  D PDLL+ F  FLP S      ++VP  +   + ++ + +  A
Sbjct: 219 DALALLADEPDLLQGFYRFLPASKSIPLAYHVPYSQGLDVNNKRAVLVNA 268



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/70 (38%), Positives = 42/70 (60%), Gaps = 2/70 (2%)

Query: 350 SQELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNG 407
           S  L F  KVK++L  +  Y+ FL+ L  YTKE    SE +++V  ++G + DLMD  N 
Sbjct: 312 SDGLCFFGKVKERLSCNFLYERFLKLLFYYTKEKFGESEWKTMVATMIGNHSDLMDELND 371

Query: 408 FLARCEKSEE 417
           F+ +C+  +E
Sbjct: 372 FMVKCKNMQE 381


>gi|393235883|gb|EJD43435.1| hypothetical protein AURDEDRAFT_114754 [Auricularia delicata
            TFB-10046 SS5]
          Length = 1401

 Score = 99.4 bits (246), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 69/271 (25%), Positives = 136/271 (50%), Gaps = 20/271 (7%)

Query: 510  PSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMR-----KNQYEESLF 564
            PSYR LP + +    S R ++  +VLND  VS  S +  Y+    +     KN YE++L 
Sbjct: 735  PSYRRLPPSEVNRLMSGRDDMCRDVLNDELVSHPSWAPGYASSSAQPQLAEKNTYEQALH 794

Query: 565  RCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTD-------GPIRVEDHFTALNLR 617
            R ED+R E D  +++++ T   ++  L+++   T+  D        P  +      +++R
Sbjct: 795  RSEDERHEFDYAIDALSRTAVALDGALQRVQ--TLPPDERAAHKLKPPLLSGALKPVHIR 852

Query: 618  CIERLYGDHGL--DVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNY 675
             I R+YG  G   DV+  L    + A+P++  RL+ K++EW R +  +N+VW  + + N+
Sbjct: 853  TIRRVYGGGGAAADVLQALHDAPTNAIPIVARRLRLKEDEWKRVQRTWNRVWRAVEAHNF 912

Query: 676  HKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEF- 734
              + DH     + +D++ L + AL  E+++    + +    +L    G R +  P +++ 
Sbjct: 913  FGAWDHEGAMARARDAEKLSSHALIEELEKARIMRLERRAAVL--DPGARAAAEPRVDWG 970

Query: 735  -EYSDPDIHEDLYQLIKYSCGEMCTTEQLDK 764
             ++   D+ +D  +L+     ++  +  +DK
Sbjct: 971  TDFECADVLQDSLKLVFSFLDQLQPSSGIDK 1001



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 45/87 (51%), Positives = 55/87 (63%)

Query: 28  QTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVI 87
           Q QV      G  ++L   DAL+YL  VK  FQD+ E Y+ FL+ MK FK+++I+T GVI
Sbjct: 232 QMQVDQQRALGEERQLDVTDALSYLDMVKAQFQDQPEIYNKFLDTMKQFKSEQINTPGVI 291

Query: 88  ARVKELFKGHRDLILGFNTFLPKGYEI 114
            RV  LF GH  LI GFN FLP GY I
Sbjct: 292 DRVSTLFAGHPKLIEGFNAFLPAGYRI 318



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 75/142 (52%), Gaps = 11/142 (7%)

Query: 114 ITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITE-V 172
           +T P+    P  + P  F  A+++VN+IK RF  +  +YK+FLDIL  Y++  +S ++ +
Sbjct: 444 MTAPMPPGVPAHEPP--FNAAMDYVNRIKMRFADEPDIYKNFLDILQTYQRGGQSDSQAI 501

Query: 173 YQEVEALFQDHPDLLEEFTHFLPDS----SGAASIHY-VPSGRNSILRDRSSAMPTARQV 227
             ++  LF+ + DL+EEF  F+  +    +G  S+   V   R    R R SA   A  V
Sbjct: 502 LMQITQLFRGNQDLIEEFKKFVNTNDEMMNGGVSLDVEVERDRPERGRARRSA---AVAV 558

Query: 228 HVDKKERAMASHADRDLSVDRP 249
              K++R  A  AD  L V RP
Sbjct: 559 DQTKRKRRTADRADASLPVQRP 580



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 37/67 (55%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           ++  +A+++++ +K +FQ    +Y  FLD +  ++ E  +   V   V  LF  HP L+E
Sbjct: 247 LDVTDALSYLDMVKAQFQDQPEIYNKFLDTMKQFKSEQINTPGVIDRVSTLFAGHPKLIE 306

Query: 189 EFTHFLP 195
            F  FLP
Sbjct: 307 GFNAFLP 313



 Score = 43.5 bits (101), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 20/73 (27%), Positives = 44/73 (60%), Gaps = 1/73 (1%)

Query: 37  GGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDF-KAQRIDTAGVIARVKELFK 95
           G  A +   N A+ Y+  +K  F D+ + Y +FL++++ + +  + D+  ++ ++ +LF+
Sbjct: 451 GVPAHEPPFNAAMDYVNRIKMRFADEPDIYKNFLDILQTYQRGGQSDSQAILMQITQLFR 510

Query: 96  GHRDLILGFNTFL 108
           G++DLI  F  F+
Sbjct: 511 GNQDLIEEFKKFV 523


>gi|18395415|ref|NP_564212.1| paired amphipathic helix domain-containing protein [Arabidopsis
           thaliana]
 gi|21554310|gb|AAM63415.1| unknown [Arabidopsis thaliana]
 gi|88900412|gb|ABD57518.1| At1g24210 [Arabidopsis thaliana]
 gi|332192375|gb|AEE30496.1| paired amphipathic helix domain-containing protein [Arabidopsis
           thaliana]
          Length = 155

 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 58/153 (37%), Positives = 87/153 (56%), Gaps = 22/153 (14%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
           LT +DA +Y+ AVK+ F D+  KY +F++++      R+D   VIARV+EL K H+DL+L
Sbjct: 10  LTKDDAHSYIIAVKETFHDEPTKYQEFIKLLNGVCDHRVDKYSVIARVEELMKDHQDLLL 69

Query: 103 GFNTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQG-DDHVYKSFLDILNM 161
           GF+ FLP                  PV  E   +F+NK+KTRFQ  D HV  +   ++ M
Sbjct: 70  GFSVFLP------------------PVSVE---DFINKLKTRFQSLDTHVVGAIRGLMKM 108

Query: 162 YRKENKSITEVYQEVEALFQDHPDLLEEFTHFL 194
           +++   S+ EV +EV  +   H DL+E+F  F 
Sbjct: 109 FKEGKMSVKEVQEEVIDVLFYHEDLIEDFLRFF 141


>gi|357454263|ref|XP_003597412.1| Histone deacetylase complex SIN3 component [Medicago truncatula]
 gi|355486460|gb|AES67663.1| Histone deacetylase complex SIN3 component [Medicago truncatula]
          Length = 237

 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 61/151 (40%), Positives = 80/151 (52%), Gaps = 23/151 (15%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFN 105
           +DA AY  AVK   Q   EKY +F EV  D++  RID  GV ARV ELFKGHR LILG N
Sbjct: 69  DDACAYDNAVKSTCQ---EKYSEFAEVTSDYRDGRIDPGGVKARVHELFKGHRHLILGIN 125

Query: 106 TFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKE 165
             +PK YEI LP  D++      +  ++A  F+              K FL +++ Y   
Sbjct: 126 NIMPKNYEIILPPSDDK------LNRQDATTFL--------------KQFLQVIHGYMNL 165

Query: 166 NKSITEVYQEVEALFQDHPDLLEEFTHFLPD 196
              I +V +    LF+ H DLL  F +FLP+
Sbjct: 166 TIDILDVIKIWMKLFKGHVDLLSGFNYFLPE 196



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 3/87 (3%)

Query: 60  QDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLE 119
           QD       FL+V+  +    ID   VI    +LFKGH DL+ GFN FLP+ Y+IT PL 
Sbjct: 146 QDATTFLKQFLQVIHGYMNLTIDILDVIKIWMKLFKGHVDLLSGFNYFLPERYQITFPLL 205

Query: 120 DEQPPPKKPVEFEEAINFVNKIKTRFQ 146
            ++    + V  ++A  F+N++K  F 
Sbjct: 206 HDRKQGHQLV-IKDA--FLNEVKAMFH 229


>gi|295665546|ref|XP_002793324.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
 gi|226278238|gb|EEH33804.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
          Length = 1576

 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 58/172 (33%), Positives = 91/172 (52%), Gaps = 6/172 (3%)

Query: 500 LDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMRKNQ 558
           ++LS+C    PSYRLLPK       S R ++   VLND W S  T  SED  F   RKNQ
Sbjct: 811 VNLSHCRALGPSYRLLPKRERQKPCSGRDDMCQSVLNDEWASHPTWASEDSGFVAHRKNQ 870

Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFTA----L 614
           +E++L R E+DR + D  +E+   T + +E L++++   T       ++          +
Sbjct: 871 FEDTLHRIEEDRHDYDHHIEACIRTIQLMEPLVQQMATMTDAERASFKLPPGLGGQSETI 930

Query: 615 NLRCIERLYG-DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNK 665
             R I+++Y  + G  V+D +     + +P++L RLKQK EEW  C++   K
Sbjct: 931 YKRVIKKIYDRERGQKVIDEMFLRPCMVMPIVLARLKQKCEEWKACQAIIMK 982



 Score = 93.2 bits (230), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 50/110 (45%), Positives = 63/110 (57%), Gaps = 11/110 (10%)

Query: 22  RGEPSGQTQVVGGGGG-----------GGAQKLTTNDALAYLKAVKDIFQDKREKYDDFL 70
           +G+PS Q+ +   G                Q+   NDAL+YL  VK  F ++ + Y+ FL
Sbjct: 219 QGQPSQQSMLGFNGSAPPQISGSVAALAQGQQPILNDALSYLDQVKVRFVEQPDVYNRFL 278

Query: 71  EVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLED 120
           ++MKDFK+Q IDT GVI RV  LF GH  LI GFNTFLP GY I    ED
Sbjct: 279 DIMKDFKSQAIDTPGVIQRVSTLFNGHPALIQGFNTFLPPGYRIECGTED 328



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 38/72 (52%), Positives = 49/72 (68%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           + PVEF  AI++VNKIK RF      YK FL+IL  Y++E+K I +VY +V  LF   PD
Sbjct: 513 RGPVEFNHAISYVNKIKNRFADSPDTYKQFLEILQTYQRESKPIQDVYAQVTILFNSAPD 572

Query: 186 LLEEFTHFLPDS 197
           LLE+F  FLP+S
Sbjct: 573 LLEDFKQFLPES 584



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 8/97 (8%)

Query: 101 ILGFNTFLPKGYE--ITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDI 158
           +LGFN   P      +    + +QP         +A+++++++K RF     VY  FLDI
Sbjct: 227 MLGFNGSAPPQISGSVAALAQGQQP------ILNDALSYLDQVKVRFVEQPDVYNRFLDI 280

Query: 159 LNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLP 195
           +  ++ +      V Q V  LF  HP L++ F  FLP
Sbjct: 281 MKDFKSQAIDTPGVIQRVSTLFNGHPALIQGFNTFLP 317



 Score = 46.2 bits (108), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 36/65 (55%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFN 105
           N A++Y+  +K+ F D  + Y  FLE+++ ++ +      V A+V  LF    DL+  F 
Sbjct: 519 NHAISYVNKIKNRFADSPDTYKQFLEILQTYQRESKPIQDVYAQVTILFNSAPDLLEDFK 578

Query: 106 TFLPK 110
            FLP+
Sbjct: 579 QFLPE 583


>gi|357502305|ref|XP_003621441.1| Paired amphipathic helix protein Sin3b [Medicago truncatula]
 gi|355496456|gb|AES77659.1| Paired amphipathic helix protein Sin3b [Medicago truncatula]
          Length = 306

 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 54/138 (39%), Positives = 84/138 (60%), Gaps = 4/138 (2%)

Query: 61  DKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLED 120
           ++R+K D+FL V+ D+K QRID A +   +K LF+GHRDLIL  N ++P GY I LP E+
Sbjct: 115 NQRDKCDNFLNVLNDYKTQRIDAANLSKLLKGLFEGHRDLILRLNYYMPDGYAIKLPSEE 174

Query: 121 EQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYK--SFLDILNMYRKENKSITEVYQEVEA 178
           EQ    +  E + A  F+N++K RF   +   K  +FL++L  YR +      +  +++ 
Sbjct: 175 EQSL--EHCEAKNAKEFLNEVKCRFIQVNQREKNDNFLNVLKDYRTQRIDDANLVIKMKK 232

Query: 179 LFQDHPDLLEEFTHFLPD 196
           +F+ H DL+    +FLPD
Sbjct: 233 IFEGHSDLISRLNYFLPD 250



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 57/156 (36%), Positives = 90/156 (57%), Gaps = 6/156 (3%)

Query: 48  ALAYLKAVKDIF--QDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFN 105
           A  +L  VK  F   ++R+KYDDFL+V+KD+K +RID A +   +  LF+GHRDLI   N
Sbjct: 14  AKEFLNEVKHRFIQDNRRDKYDDFLKVLKDYKTKRIDDATISKLLNGLFEGHRDLISRLN 73

Query: 106 TFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYK--SFLDILNMYR 163
            F+P G++I LP   E+    +  E + A  FVN +K RF   +   K  +FL++LN Y+
Sbjct: 74  YFMPDGFKIKLP--KEEEESLEHSEEKNAKEFVNDVKCRFIQVNQRDKCDNFLNVLNDYK 131

Query: 164 KENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSG 199
            +      + + ++ LF+ H DL+    +++PD   
Sbjct: 132 TQRIDAANLSKLLKGLFEGHRDLILRLNYYMPDGYA 167



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 55/150 (36%), Positives = 75/150 (50%), Gaps = 48/150 (32%)

Query: 47  DALAYLKAVKDIF--QDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGF 104
           +A  +L  VK  F   ++REK D+FL V+KD++ QRID A ++ ++K++F+GH DLI   
Sbjct: 185 NAKEFLNEVKCRFIQVNQREKNDNFLNVLKDYRTQRIDDANLVIKMKKIFEGHSDLISRL 244

Query: 105 NTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRK 164
           N FLP GYEI LPLE+EQ   K                                      
Sbjct: 245 NYFLPDGYEIKLPLEEEQVHVK-------------------------------------- 266

Query: 165 ENKSITEVYQEVEALFQDHPDLLEEFTHFL 194
                    ++V  LFQ +PDLL+EFTHFL
Sbjct: 267 --------LEDVTTLFQGYPDLLDEFTHFL 288


>gi|412988784|emb|CCO15375.1| predicted protein [Bathycoccus prasinos]
          Length = 488

 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 60/165 (36%), Positives = 86/165 (52%), Gaps = 22/165 (13%)

Query: 44  TTNDALAYLKAVKDIFQ-DKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
           T NDAL Y++ VK  F  D+   Y+ FL+VM+DFK+ R DT  V+ RVK+L KGH DL+ 
Sbjct: 14  TANDALVYVRTVKLRFNGDQGHVYEAFLDVMRDFKSGRYDTTDVVKRVKKLLKGHEDLLD 73

Query: 103 GFNTFLP--KGYEITLPLED------------------EQPPPKKPVEFEEAINFVNKIK 142
           GFN FLP  K  +     ED                  E+  P +P       N + +I+
Sbjct: 74  GFNCFLPDIKKEKSDFKREDSAKTQQQNKQQHNSEIKKEETNPNQPT-INGGYNLLKRIR 132

Query: 143 TRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLL 187
             +  D+  YK+ L +L  +R +  +  EV + + ALF DHP+L 
Sbjct: 133 EIYSKDERPYKALLTMLIKFRNQETTTDEVVKNIGALFFDHPELF 177



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 32/79 (40%), Positives = 48/79 (60%), Gaps = 4/79 (5%)

Query: 119 EDEQPPPKKPVEFEEAINFVNKIKTRFQGDD-HVYKSFLDILNMYRKENKSITEVYQEVE 177
           EDEQ PP+      +A+ +V  +K RF GD  HVY++FLD++  ++      T+V + V+
Sbjct: 6   EDEQQPPQTA---NDALVYVRTVKLRFNGDQGHVYEAFLDVMRDFKSGRYDTTDVVKRVK 62

Query: 178 ALFQDHPDLLEEFTHFLPD 196
            L + H DLL+ F  FLPD
Sbjct: 63  KLLKGHEDLLDGFNCFLPD 81


>gi|357620023|gb|EHJ72361.1| hypothetical protein KGM_17534 [Danaus plexippus]
          Length = 326

 Score = 96.3 bits (238), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 44/74 (59%), Positives = 56/74 (75%)

Query: 41  QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDL 100
           Q+L   DAL+YL  VK  F  + + Y+DFL++MK+FK+Q IDT GVI RV  LFKGH +L
Sbjct: 186 QRLKVEDALSYLDQVKYKFNTQPQVYNDFLDIMKEFKSQTIDTPGVITRVSNLFKGHPEL 245

Query: 101 ILGFNTFLPKGYEI 114
           I+GFNTFLP GY+I
Sbjct: 246 IVGFNTFLPPGYKI 259



 Score = 50.8 bits (120), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/67 (31%), Positives = 39/67 (58%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           ++ E+A+++++++K +F     VY  FLDI+  ++ +      V   V  LF+ HP+L+ 
Sbjct: 188 LKVEDALSYLDQVKYKFNTQPQVYNDFLDIMKEFKSQTIDTPGVITRVSNLFKGHPELIV 247

Query: 189 EFTHFLP 195
            F  FLP
Sbjct: 248 GFNTFLP 254


>gi|303275326|ref|XP_003056959.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226461311|gb|EEH58604.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 583

 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 56/146 (38%), Positives = 79/146 (54%), Gaps = 5/146 (3%)

Query: 46  NDALAYLKAVKDIFQDKREK-YDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGF 104
            DAL Y++AVK  F     + Y+ FLEVM+DFK  R DT  V+ RVK L  GH DL+ GF
Sbjct: 122 QDALTYVRAVKARFAASNPQVYEAFLEVMRDFKNARSDTPEVVKRVKVLLGGHPDLLDGF 181

Query: 105 NTFLPKGYEITL---PLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNM 161
           N FLP+ Y+ +       +EQ    +P       N + +I+  +  D+  Y +FL IL  
Sbjct: 182 NCFLPEPYKFSASKDAAAEEQGDGTQPT-IGGGYNLLKRIRKVYSHDERPYHAFLAILIR 240

Query: 162 YRKENKSITEVYQEVEALFQDHPDLL 187
           +R    +  +V + V  LF D P+LL
Sbjct: 241 FRNTEFTTEQVIKNVSTLFYDQPELL 266



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 1/70 (1%)

Query: 128 PVEFEEAINFVNKIKTRFQGDD-HVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDL 186
           P   ++A+ +V  +K RF   +  VY++FL+++  ++       EV + V+ L   HPDL
Sbjct: 118 PEPPQDALTYVRAVKARFAASNPQVYEAFLEVMRDFKNARSDTPEVVKRVKVLLGGHPDL 177

Query: 187 LEEFTHFLPD 196
           L+ F  FLP+
Sbjct: 178 LDGFNCFLPE 187


>gi|145346517|ref|XP_001417733.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144577961|gb|ABO96026.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 440

 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 53/154 (34%), Positives = 78/154 (50%), Gaps = 14/154 (9%)

Query: 47  DALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNT 106
           DALAY++ V+D F  +  KY +FL  M+DFK   +   GVI RV+   +GH DL+ GF  
Sbjct: 14  DALAYVREVRDRFARQTGKYREFLAAMRDFKTGTLTPEGVIERVRRCLRGHDDLLDGFRA 73

Query: 107 FLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKEN 166
           FLP           E+    +        + + +I+ ++  DD  Y++FL  L  +R + 
Sbjct: 74  FLP-----------EETDENRSATLLSGQDLLKRIRAQYASDDRPYQAFLQTLIKFRNKQ 122

Query: 167 KSITEVYQEVEALFQDHPDLLE---EFTHFLPDS 197
            S  EV Q+   LF DHP LLE       F+P +
Sbjct: 123 FSAEEVVQKCAILFYDHPQLLEGENGLATFVPKT 156


>gi|349804993|gb|AEQ17969.1| hypothetical protein [Hymenochirus curtipes]
          Length = 277

 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 57/152 (37%), Positives = 86/152 (56%), Gaps = 15/152 (9%)

Query: 498 QELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKN 557
           +E+D ++C R   SYR          AS RT L  EVLND WVS  S SED +F   +K 
Sbjct: 137 KEIDYASCRRIGSSYR----------ASGRTALCKEVLNDTWVSFPSWSEDSTFVSSKKT 186

Query: 558 QYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TA 613
            YEE L RCED+RFELD++LE+   T + +E + +K++  + +     R++D        
Sbjct: 187 PYEEQLHRCEDERFELDVVLETNLATIRVLESVQKKLSRMSPEDQEKFRLDDRLGGTSEV 246

Query: 614 LNLRCIERLYGDHGLDVMDVLRKNASLALPVI 645
           +  R I R+YG+   D+++ L K+   A+PV+
Sbjct: 247 IQRRAIYRIYGEEASDIVESL-KDPVTAVPVV 277



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 26/62 (41%), Positives = 38/62 (61%), Gaps = 2/62 (3%)

Query: 351 QELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGF 408
           QE SF  KV+  L+    Y+ FLRC+ L+ +E+++ SEL  LV   LG++P+L   F  F
Sbjct: 55  QEFSFFSKVRRVLKSQEVYENFLRCIALFNQELVSGSELLQLVAPFLGKFPELFARFKSF 114

Query: 409 LA 410
           L 
Sbjct: 115 LG 116


>gi|396471145|ref|XP_003838801.1| hypothetical protein LEMA_P024740.1 [Leptosphaeria maculans JN3]
 gi|312215370|emb|CBX95322.1| hypothetical protein LEMA_P024740.1 [Leptosphaeria maculans JN3]
          Length = 727

 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 46/86 (53%), Positives = 56/86 (65%)

Query: 29  TQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIA 88
           T   G  G G  Q+   NDAL+YL  VK  F D  + Y+ FL++MKDFK+  IDT GVI 
Sbjct: 294 TGPPGAMGMGQGQQPILNDALSYLDQVKVQFADHPDVYNRFLDIMKDFKSGAIDTPGVIE 353

Query: 89  RVKELFKGHRDLILGFNTFLPKGYEI 114
           RV  LF G+ +LI GFNTFLP GY+I
Sbjct: 354 RVSTLFAGNPNLIQGFNTFLPPGYKI 379



 Score = 89.7 bits (221), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 38/72 (52%), Positives = 50/72 (69%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           + PVEF  AI++VNKIK RF     +YK FL+IL  Y++E+K I +VY +V  LF   PD
Sbjct: 553 RGPVEFNHAISYVNKIKNRFASQPDIYKQFLEILQTYQRESKPIQDVYAQVTTLFGGAPD 612

Query: 186 LLEEFTHFLPDS 197
           LLE+F  FLP+S
Sbjct: 613 LLEDFKQFLPES 624



 Score = 48.5 bits (114), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 37/65 (56%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFN 105
           N A++Y+  +K+ F  + + Y  FLE+++ ++ +      V A+V  LF G  DL+  F 
Sbjct: 559 NHAISYVNKIKNRFASQPDIYKQFLEILQTYQRESKPIQDVYAQVTTLFGGAPDLLEDFK 618

Query: 106 TFLPK 110
            FLP+
Sbjct: 619 QFLPE 623



 Score = 47.0 bits (110), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 20/70 (28%), Positives = 40/70 (57%), Gaps = 1/70 (1%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           ++P+   +A+++++++K +F     VY  FLDI+  ++        V + V  LF  +P+
Sbjct: 306 QQPI-LNDALSYLDQVKVQFADHPDVYNRFLDIMKDFKSGAIDTPGVIERVSTLFAGNPN 364

Query: 186 LLEEFTHFLP 195
           L++ F  FLP
Sbjct: 365 LIQGFNTFLP 374


>gi|190349058|gb|EDK41638.2| hypothetical protein PGUG_05736 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 469

 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 45/83 (54%), Positives = 57/83 (68%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
           L   DAL+YL  VK  F  + + Y++FL++MKDFK+Q IDT+ VI RV  LFKGH +LI 
Sbjct: 104 LNVRDALSYLDQVKIQFYSQADVYNNFLDIMKDFKSQNIDTSEVIDRVSTLFKGHPNLIQ 163

Query: 103 GFNTFLPKGYEITLPLEDEQPPP 125
           GFNTFLP GY+I   L+   P P
Sbjct: 164 GFNTFLPAGYKIECSLDPSDPNP 186



 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 41/81 (50%), Positives = 57/81 (70%), Gaps = 2/81 (2%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           +EF  AI++VNKIKTRF     +YK FL+IL  Y++E K I+EVY++V  LF + PDLL+
Sbjct: 255 IEFNHAISYVNKIKTRFANQPDIYKHFLEILQTYQREQKPISEVYEQVTVLFANSPDLLD 314

Query: 189 EFTHFLPDSSGAASIH--YVP 207
           +F  FLPD+S  A+    Y+P
Sbjct: 315 DFKQFLPDTSNQATTQPAYLP 335



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 66/315 (20%), Positives = 117/315 (37%), Gaps = 89/315 (28%)

Query: 117 PLEDEQP----PPKKP---------------VEFEEAINFVNKIKTRFQGDDHVYKSFLD 157
           P+ +EQP    PP  P               +   +A+++++++K +F     VY +FLD
Sbjct: 73  PMNNEQPSASAPPGMPAGVPNRTATTNVYRTLNVRDALSYLDQVKIQFYSQADVYNNFLD 132

Query: 158 ILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDR 217
           I+  ++ +N   +EV   V  LF+ HP+L++ F  F                        
Sbjct: 133 IMKDFKSQNIDTSEVIDRVSTLFKGHPNLIQGFNTF------------------------ 168

Query: 218 SSAMPTARQVHVDKKERAMASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERRDD 277
              +P   ++               + S+D  DP+  RV   +       G  +R   + 
Sbjct: 169 ---LPAGYKI---------------ECSLDPSDPNPIRVTTPT-------GTTKRPNMNA 203

Query: 278 HRRERERDDRDFENDVNRDFSMQRFPHKRKSARKIEDSTAEPLHQGGEGDENFGMHPVSS 337
              +      +     +   + Q      ++A +++ S   P          FG      
Sbjct: 204 TYGQWSSTTGETNGQQDSQANQQALSSAHQAAHQLQASQQPP----------FG------ 247

Query: 338 SYDDKNAMKSMFSQELSFCEKVKDKLR---DDYQEFLRCLHLYTKEIITRSELQSLVGDL 394
             +D N  +  F+  +S+  K+K +     D Y+ FL  L  Y +E    SE+   V  L
Sbjct: 248 --NDPNGGQIEFNHAISYVNKIKTRFANQPDIYKHFLEILQTYQREQKPISEVYEQVTVL 305

Query: 395 LGRYPDLMDGFNGFL 409
               PDL+D F  FL
Sbjct: 306 FANSPDLLDDFKQFL 320



 Score = 42.7 bits (99), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 23/84 (27%), Positives = 43/84 (51%), Gaps = 2/84 (2%)

Query: 26  SGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAG 85
           + Q    G    GG  ++  N A++Y+  +K  F ++ + Y  FLE+++ ++ ++   + 
Sbjct: 240 ASQQPPFGNDPNGG--QIEFNHAISYVNKIKTRFANQPDIYKHFLEILQTYQREQKPISE 297

Query: 86  VIARVKELFKGHRDLILGFNTFLP 109
           V  +V  LF    DL+  F  FLP
Sbjct: 298 VYEQVTVLFANSPDLLDDFKQFLP 321


>gi|146412003|ref|XP_001481973.1| hypothetical protein PGUG_05736 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 469

 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 45/83 (54%), Positives = 57/83 (68%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
           L   DAL+YL  VK  F  + + Y++FL++MKDFK+Q IDT+ VI RV  LFKGH +LI 
Sbjct: 104 LNVRDALSYLDQVKIQFYSQADVYNNFLDIMKDFKSQNIDTSEVIDRVSTLFKGHPNLIQ 163

Query: 103 GFNTFLPKGYEITLPLEDEQPPP 125
           GFNTFLP GY+I   L+   P P
Sbjct: 164 GFNTFLPAGYKIECSLDPSDPNP 186



 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 41/81 (50%), Positives = 57/81 (70%), Gaps = 2/81 (2%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           +EF  AI++VNKIKTRF     +YK FL+IL  Y++E K I+EVY++V  LF + PDLL+
Sbjct: 255 IEFNHAISYVNKIKTRFANQPDIYKHFLEILQTYQREQKPISEVYEQVTVLFANSPDLLD 314

Query: 189 EFTHFLPDSSGAASIH--YVP 207
           +F  FLPD+S  A+    Y+P
Sbjct: 315 DFKQFLPDTSNQATTQPAYLP 335



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 19/98 (19%)

Query: 117 PLEDEQP----PPKKP---------------VEFEEAINFVNKIKTRFQGDDHVYKSFLD 157
           P+ +EQP    PP  P               +   +A+++++++K +F     VY +FLD
Sbjct: 73  PMNNEQPSALAPPGMPAGVPNRTATTNVYRTLNVRDALSYLDQVKIQFYSQADVYNNFLD 132

Query: 158 ILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLP 195
           I+  ++ +N   +EV   V  LF+ HP+L++ F  FLP
Sbjct: 133 IMKDFKSQNIDTSEVIDRVSTLFKGHPNLIQGFNTFLP 170



 Score = 43.1 bits (100), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 28/103 (27%), Positives = 52/103 (50%), Gaps = 7/103 (6%)

Query: 12  SQIKRPMISSRGEPSGQTQVV-----GGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKY 66
           SQ  +  +SS  + + Q Q +     G    GG  ++  N A++Y+  +K  F ++ + Y
Sbjct: 221 SQANQQALSSAHQAAHQLQALQQPPFGNDPNGG--QIEFNHAISYVNKIKTRFANQPDIY 278

Query: 67  DDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLP 109
             FLE+++ ++ ++   + V  +V  LF    DL+  F  FLP
Sbjct: 279 KHFLEILQTYQREQKPISEVYEQVTVLFANSPDLLDDFKQFLP 321


>gi|9802520|gb|AAF99722.1|AC004557_1 F17L21.2 [Arabidopsis thaliana]
          Length = 210

 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 44/80 (55%), Positives = 54/80 (67%)

Query: 35  GGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELF 94
            G G   K T +DA AY++ VK  F +  +KYDDF+ +MK+FKA++ID    I  VKEL 
Sbjct: 2   AGEGSKPKATVDDAYAYIRTVKSTFHNDPDKYDDFMAIMKNFKARKIDRNTCIEEVKELL 61

Query: 95  KGHRDLILGFNTFLPKGYEI 114
           KGHRDLI GFN FLPK  EI
Sbjct: 62  KGHRDLISGFNAFLPKCLEI 81


>gi|297850924|ref|XP_002893343.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297339185|gb|EFH69602.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 102

 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 49/88 (55%), Positives = 60/88 (68%), Gaps = 4/88 (4%)

Query: 31  VVGGG----GGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGV 86
           +VGGG    G G   K   +DA AYL+AV+  F + R+KYDDF+ VM +FKA+RID  G 
Sbjct: 1   MVGGGSKHVGEGSKPKAKIDDAYAYLRAVRAKFHNDRKKYDDFVTVMNNFKARRIDRDGC 60

Query: 87  IARVKELFKGHRDLILGFNTFLPKGYEI 114
           I  V++L KGHRDLI GFN FLPK  EI
Sbjct: 61  IKEVEQLLKGHRDLISGFNAFLPKCLEI 88



 Score = 40.4 bits (93), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 2/75 (2%)

Query: 121 EQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALF 180
           E   PK  ++  +A  ++  ++ +F  D   Y  F+ ++N ++          +EVE L 
Sbjct: 11  EGSKPKAKID--DAYAYLRAVRAKFHNDRKKYDDFVTVMNNFKARRIDRDGCIKEVEQLL 68

Query: 181 QDHPDLLEEFTHFLP 195
           + H DL+  F  FLP
Sbjct: 69  KGHRDLISGFNAFLP 83


>gi|402466864|gb|EJW02273.1| hypothetical protein EDEG_03297, partial [Edhazardia aedis USNM
            41457]
          Length = 2093

 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 64/223 (28%), Positives = 117/223 (52%), Gaps = 16/223 (7%)

Query: 479  VGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDH 538
            V P ++      K L K + +L  SN    T SYR+LP+ Y       +  +  EVLN  
Sbjct: 1464 VKPNINYNIQPTKNLLKAVDKLIKSNA---TTSYRILPEKYRYLDCYNQHYIAKEVLNTI 1520

Query: 539  WVSV-TSGSEDYSFKHMRKNQYEESLFRCEDDRFELDML---LESVNVTTKRVEELLEKI 594
             +S  T  SED +F   +K  +EE L+R ED+R+E++++   +E + V  +R++   E+ 
Sbjct: 1521 CISCPTLESEDSTFISSKKTIFEELLYRVEDERYEMELMKYRIEMLIVALERLDLTKEET 1580

Query: 595  NNNTIKTDGPIRVEDHFTALNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQE 654
            + + ++  G I +E          +E +YGD G D+ + +     +++P++L RL    +
Sbjct: 1581 SIDDLEIPGGITLE---------ILEIIYGDKGADIFEGILTKPQVSVPIVLNRLFLILK 1631

Query: 655  EWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAK 697
            E +R     N+ W +  +KNY+K+LD +   F+  + K+L ++
Sbjct: 1632 EQSRKIRSKNRRWRDCINKNYYKALDMQCLTFRNYEKKNLSSR 1674



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/68 (51%), Positives = 46/68 (67%)

Query: 47  DALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNT 106
           DA+ YL  VK+ FQ   + YDDFLE+M+D+K  ++D AGV+  V+ LF G   LI GFN 
Sbjct: 550 DAMLYLNRVKEEFQSDMKTYDDFLELMRDYKHGKMDAAGVLLAVQNLFHGKIYLIEGFNN 609

Query: 107 FLPKGYEI 114
           FLPK + I
Sbjct: 610 FLPKQFRI 617



 Score = 45.8 bits (107), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 23/78 (29%), Positives = 42/78 (53%)

Query: 118  LEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVE 177
            ++++ P   +  + ++A NFV K+K R       YK F++IL  Y+K  +    +  ++ 
Sbjct: 982  MKNKPPSVNETTKQQKAFNFVQKVKRRLLDKPENYKQFIEILQKYQKYPEEPGRILFQLR 1041

Query: 178  ALFQDHPDLLEEFTHFLP 195
             +   H DLL+EF  F+P
Sbjct: 1042 KILLGHDDLLDEFVEFVP 1059


>gi|403419374|emb|CCM06074.1| predicted protein [Fibroporia radiculosa]
          Length = 210

 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 42/74 (56%), Positives = 52/74 (70%)

Query: 41  QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDL 100
           + L   DAL YL ++K  FQD+ + Y+ FL++MKDF++Q IDT GVI RV  LF GH  L
Sbjct: 82  RPLKITDALEYLDSIKLKFQDRPDLYNKFLDIMKDFRSQIIDTPGVIDRVSSLFHGHPSL 141

Query: 101 ILGFNTFLPKGYEI 114
           I GFNTFLP GY I
Sbjct: 142 IQGFNTFLPAGYRI 155



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 46/88 (52%)

Query: 108 LPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENK 167
           L  G      L+  QP  ++P++  +A+ +++ IK +FQ    +Y  FLDI+  +R +  
Sbjct: 63  LSSGLAAATHLDAHQPATERPLKITDALEYLDSIKLKFQDRPDLYNKFLDIMKDFRSQII 122

Query: 168 SITEVYQEVEALFQDHPDLLEEFTHFLP 195
               V   V +LF  HP L++ F  FLP
Sbjct: 123 DTPGVIDRVSSLFHGHPSLIQGFNTFLP 150


>gi|297811641|ref|XP_002873704.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297319541|gb|EFH49963.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 87

 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 43/67 (64%), Positives = 51/67 (76%)

Query: 50  AYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLP 109
           AY K VKD F D+REKYD F+ VM D +A+RI      AR+KELFKGH +LI+GFNTFLP
Sbjct: 6   AYFKEVKDTFHDQREKYDMFIRVMSDLRARRIRHYTAFARLKELFKGHNELIIGFNTFLP 65

Query: 110 KGYEITL 116
            GY+ITL
Sbjct: 66  PGYKITL 72


>gi|164657965|ref|XP_001730108.1| hypothetical protein MGL_2490 [Malassezia globosa CBS 7966]
 gi|159104003|gb|EDP42894.1| hypothetical protein MGL_2490 [Malassezia globosa CBS 7966]
          Length = 650

 Score = 93.2 bits (230), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 47/100 (47%), Positives = 58/100 (58%), Gaps = 3/100 (3%)

Query: 104 FNTFLPKGYEIT---LPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILN 160
           +   +P GYE      P    +P  + PVEF  AI++VNKIK RF  D   YK FL+IL 
Sbjct: 174 YGGAMPMGYEPVGRGPPAGAPEPVLRPPVEFNHAISYVNKIKQRFSNDPDTYKQFLEILQ 233

Query: 161 MYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGA 200
            Y+KE + I EVY +V  LF    DLLEEF  FLPD+  A
Sbjct: 234 TYQKEQRPIHEVYAQVTVLFDHAKDLLEEFKQFLPDTGAA 273



 Score = 42.0 bits (97), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 20/64 (31%), Positives = 36/64 (56%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFN 105
           N A++Y+  +K  F +  + Y  FLE+++ ++ ++     V A+V  LF   +DL+  F 
Sbjct: 205 NHAISYVNKIKQRFSNDPDTYKQFLEILQTYQKEQRPIHEVYAQVTVLFDHAKDLLEEFK 264

Query: 106 TFLP 109
            FLP
Sbjct: 265 QFLP 268


>gi|15223451|ref|NP_174042.1| paired amphipathic helix repeat-containing protein [Arabidopsis
           thaliana]
 gi|332192675|gb|AEE30796.1| paired amphipathic helix repeat-containing protein [Arabidopsis
           thaliana]
          Length = 184

 Score = 93.2 bits (230), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 44/80 (55%), Positives = 54/80 (67%)

Query: 35  GGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELF 94
            G G   K T +DA AY++ VK  F +  +KYDDF+ +MK+FKA++ID    I  VKEL 
Sbjct: 2   AGEGSKPKATVDDAYAYIRTVKSTFHNDPDKYDDFMAIMKNFKARKIDRNTCIEEVKELL 61

Query: 95  KGHRDLILGFNTFLPKGYEI 114
           KGHRDLI GFN FLPK  EI
Sbjct: 62  KGHRDLISGFNAFLPKCLEI 81


>gi|9802522|gb|AAF99724.1|AC004557_3 F17L21.4 [Arabidopsis thaliana]
          Length = 331

 Score = 92.8 bits (229), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 70/200 (35%), Positives = 100/200 (50%), Gaps = 22/200 (11%)

Query: 31  VVGGG----GGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGV 86
           +VGGG    G G   + T +DA AYL+AV+  F +  +KYDDF+ VM +FKA+R    G 
Sbjct: 1   MVGGGSKHVGEGSKPRATKDDAYAYLRAVRAKFHNDSKKYDDFVAVMTNFKARR---DGC 57

Query: 87  IARVKELFKGHRDLILGFNTFLPKGYEIT-------LPLEDEQPPPKKPVEFEEA-INFV 138
           I  V++L KGHRDLI GFN FLPK  EI          LE      +K +   ++ +NF 
Sbjct: 58  IKEVEQLLKGHRDLISGFNAFLPKCLEIKNYYFGAGEDLEVVYTAKRKLLARSDSKVNFT 117

Query: 139 NKIKT----RFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFL 194
             ++     RF+ +   Y+ FL +L   R         +  +  L +DH DLL  F   L
Sbjct: 118 PWLEEAYHRRFRDEPAKYRQFLSLLRDRRARRIDKATFFVGLVELIKDHLDLLLGFNALL 177

Query: 195 PDSSGAASIHYVPSGRNSIL 214
           P       I   P+G  +++
Sbjct: 178 P---ARFQIPITPAGFQNVV 194



 Score = 89.7 bits (221), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 61/171 (35%), Positives = 86/171 (50%), Gaps = 31/171 (18%)

Query: 25  PSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTA 84
           P+G   VVG        + T  DA +YL +VK  F D+  KY++ L+++ D +A+R+D A
Sbjct: 187 PAGFQNVVGRSV---PPETTIEDATSYLNSVKRAFHDEPAKYEELLKLLNDIEARRVDAA 243

Query: 85  GVIARVKELFKGHRDLILGFNTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTR 144
             IA V+EL K H+ L+ GF+ FL                          + F+ K+K  
Sbjct: 244 SFIASVEELMKDHQTLLNGFSVFL-----------------------SAEMKFIRKLK-- 278

Query: 145 FQGD-DHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFL 194
             GD  HV  S L IL MY + NKS +E +QEV  L QDH DL+ E    +
Sbjct: 279 --GDGSHVADSVLQILRMYSEGNKSKSEAFQEVVPLVQDHEDLVMELIKII 327



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 47/142 (33%), Positives = 71/142 (50%), Gaps = 8/142 (5%)

Query: 59  FQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPL 118
           F+D+  KY  FL +++D +A+RID A     + EL K H DL+LGFN  LP  ++I +  
Sbjct: 128 FRDEPAKYRQFLSLLRDRRARRIDKATFFVGLVELIKDHLDLLLGFNALLPARFQIPITP 187

Query: 119 EDEQ------PPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEV 172
              Q       PP+  +  E+A +++N +K  F  +   Y+  L +LN            
Sbjct: 188 AGFQNVVGRSVPPETTI--EDATSYLNSVKRAFHDEPAKYEELLKLLNDIEARRVDAASF 245

Query: 173 YQEVEALFQDHPDLLEEFTHFL 194
              VE L +DH  LL  F+ FL
Sbjct: 246 IASVEELMKDHQTLLNGFSVFL 267


>gi|166007193|pdb|2RMR|A Chain A, Solution Structure Of Msin3a Pah1 Domain
 gi|166007194|pdb|2RMS|A Chain A, Solution Structure Of The Msin3a Pah1-Sap25 Sid Complex
          Length = 71

 Score = 92.8 bits (229), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 43/71 (60%), Positives = 55/71 (77%)

Query: 41  QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDL 100
           Q+L   DAL+YL  VK  F  + + Y+DFL++MK+FK+Q IDT GVI+RV +LFKGH DL
Sbjct: 1   QRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDL 60

Query: 101 ILGFNTFLPKG 111
           I+GFNTFLP G
Sbjct: 61  IMGFNTFLPPG 71



 Score = 52.0 bits (123), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/67 (32%), Positives = 40/67 (59%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           ++ E+A+++++++K +F     VY  FLDI+  ++ ++     V   V  LF+ HPDL+ 
Sbjct: 3   LKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIM 62

Query: 189 EFTHFLP 195
            F  FLP
Sbjct: 63  GFNTFLP 69


>gi|258577997|ref|XP_002543180.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
 gi|237903446|gb|EEP77847.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
          Length = 440

 Score = 92.8 bits (229), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 42/70 (60%), Positives = 50/70 (71%)

Query: 45  TNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGF 104
           T DAL+YL  VK  F ++ + Y+ FL++MKDFK+Q IDT GVI RV  LF GH  LI GF
Sbjct: 5   TQDALSYLDQVKVRFVEQPDVYNRFLDIMKDFKSQAIDTPGVIQRVSTLFNGHPSLIQGF 64

Query: 105 NTFLPKGYEI 114
           NTFLP GY I
Sbjct: 65  NTFLPPGYRI 74



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 39/79 (49%), Positives = 53/79 (67%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           + PVEF  AI++VNKIK RF     +YK FL+IL  Y++E+K I +VY +V  LF   PD
Sbjct: 262 RGPVEFNHAISYVNKIKNRFADSPEIYKQFLEILQTYQRESKPIQDVYAQVTVLFNSAPD 321

Query: 186 LLEEFTHFLPDSSGAASIH 204
           LLE+F  FLP+S+  A + 
Sbjct: 322 LLEDFKQFLPESAAQAKVQ 340



 Score = 64.3 bits (155), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 63/341 (18%), Positives = 123/341 (36%), Gaps = 53/341 (15%)

Query: 132 EEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFT 191
           ++A+++++++K RF     VY  FLDI+  ++ +      V Q V  LF  HP L++ F 
Sbjct: 6   QDALSYLDQVKVRFVEQPDVYNRFLDIMKDFKSQAIDTPGVIQRVSTLFNGHPSLIQGFN 65

Query: 192 HFLP----------DSSGAASIHYVPSGRNSILRDRS--------------SAMPTARQV 227
            FLP          D+  A  +   PSG N+I    +                +P+    
Sbjct: 66  TFLPPGYRIECGPDDNPDAIRVT-TPSGTNTISMSATRPSLESANEPGQSGGLVPSGHTE 124

Query: 228 HVDKKERAMASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERRDDHRRERERDDR 287
           + ++      +   +      P P   R    S +   +     +  +  H+        
Sbjct: 125 YYEQSRPGWQAGHGQQQPAQGPMPSAVRSYSPSGRIVPQPQYGPQNAQGQHQEGSYEYQN 184

Query: 288 DFENDVNRDFSMQRFPHKRKSARKIEDSTAEPLHQGGEGDENFGMHPVSSSYDDKNAMKS 347
             E       +      +++   +++++ +  +  GG G     + P SS     N   +
Sbjct: 185 QHEQPTPATTAAMLHQQEQRGVSQLQNAVS--VATGGAGRSVLQLPPTSSQTPGPNQPAN 242

Query: 348 M-----------------------FSQELSFCEKVKDKLRDD---YQEFLRCLHLYTKEI 381
                                   F+  +S+  K+K++  D    Y++FL  L  Y +E 
Sbjct: 243 SLAGLGSGGLPGGQSEATRRGPVEFNHAISYVNKIKNRFADSPEIYKQFLEILQTYQRES 302

Query: 382 ITRSELQSLVGDLLGRYPDLMDGFNGFLARCEKSEELLADV 422
               ++ + V  L    PDL++ F  FL       ++   V
Sbjct: 303 KPIQDVYAQVTVLFNSAPDLLEDFKQFLPESAAQAKVQGPV 343



 Score = 47.8 bits (112), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 36/65 (55%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFN 105
           N A++Y+  +K+ F D  E Y  FLE+++ ++ +      V A+V  LF    DL+  F 
Sbjct: 268 NHAISYVNKIKNRFADSPEIYKQFLEILQTYQRESKPIQDVYAQVTVLFNSAPDLLEDFK 327

Query: 106 TFLPK 110
            FLP+
Sbjct: 328 QFLPE 332


>gi|15223465|ref|NP_174044.1| paired amphipathic helix repeat-containing protein [Arabidopsis
           thaliana]
 gi|8778870|gb|AAF79869.1|AC000348_22 T7N9.34 [Arabidopsis thaliana]
 gi|332192677|gb|AEE30798.1| paired amphipathic helix repeat-containing protein [Arabidopsis
           thaliana]
          Length = 137

 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 48/88 (54%), Positives = 60/88 (68%), Gaps = 4/88 (4%)

Query: 31  VVGGG----GGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGV 86
           +VGGG    G G   + T +DA AYL+AV+  F +  +KYDDF+ VM +FKA+RID  G 
Sbjct: 1   MVGGGSKHVGEGSKPRATKDDAYAYLRAVRAKFHNDSKKYDDFVAVMTNFKARRIDRDGC 60

Query: 87  IARVKELFKGHRDLILGFNTFLPKGYEI 114
           I  V++L KGHRDLI GFN FLPK  EI
Sbjct: 61  IKEVEQLLKGHRDLISGFNAFLPKCLEI 88


>gi|297850904|ref|XP_002893333.1| hypothetical protein ARALYDRAFT_313265 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339175|gb|EFH69592.1| hypothetical protein ARALYDRAFT_313265 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 174

 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 58/168 (34%), Positives = 93/168 (55%), Gaps = 17/168 (10%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
           LT  DA +Y+  VK+ F D+  KY +F++++   +  R+D   V+ARV+EL KGH+DL+L
Sbjct: 10  LTVEDAHSYINTVKETFHDQPTKYVEFVKLLNGVRELRVDKDSVVARVEELMKGHQDLLL 69

Query: 103 GFNTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIK-------TRFQ-GDDHVYKS 154
           GFN FL           + +   +   + + A +F+N +K       TRFQ  D HV  +
Sbjct: 70  GFNVFLS---------PEAKKAARTKKKLDAAKDFMNNLKNKFVHLQTRFQRLDTHVVGA 120

Query: 155 FLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAAS 202
           F  I+ M+++   S+ EV +EV  +   H DL+E+F  FL     A++
Sbjct: 121 FQGIMKMFKEGKMSVKEVREEVIDVLFYHEDLIEDFLKFLKKKPVASA 168


>gi|440492674|gb|ELQ75222.1| Histone deacetylase complex, SIN3 component, partial
           [Trachipleistophora hominis]
          Length = 889

 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 146/599 (24%), Positives = 250/599 (41%), Gaps = 108/599 (18%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           K+ +   +AI+F+  +KT F  D  +Y SFL+++  Y+        V +    LF+  PD
Sbjct: 169 KEDLNLNDAISFLETVKTVFADDPSIYDSFLEVMRDYKHGKIDAGGVVRAATTLFKGKPD 228

Query: 186 LLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQVHVDKKERAMASHADRDLS 245
           +LE F  FLP        + +  G    +R      P  R       ER M  H   +  
Sbjct: 229 ILEGFNDFLPPE------YKIDRGNRRRMRMEPPGRPIERM-----NERFMPGH---ERM 274

Query: 246 VDRPDPDHDRVLLKSDKDQRRRGEKERERRDDHRRERERDDRDFENDVNRDFSMQRFPHK 305
           +DRPD   +R++           ++  ER   H       DR    D+ +    ++F   
Sbjct: 275 MDRPDRMGERIV----------PDRAGERPIPH-------DRVLPKDMPKVMDAKQFVP- 316

Query: 306 RKSARKIEDSTAEPLHQGGEGDENFGMHPVSSSYDDKNAMKSMFSQELSFCEKVKDKLRD 365
                                    G +P  S++D + A +   +  L+F +KVK KL +
Sbjct: 317 -------------------------GSNPPLSAWDGQQAEEQTVA--LNFIKKVKSKLNN 349

Query: 366 D--YQEFLRCLHLYTKEIITRSEL-QSLVGDLLGRYPDLMDGFNGFLARCEKSEELLADV 422
              Y+EF+  L  Y K   T+ EL  + +  +LG   DL+D F  F+ + E S   LA+V
Sbjct: 350 MKLYKEFIEALTHYQK---TKDELVLAKIKKILGDNRDLIDEFLTFMPKGEDSA--LAEV 404

Query: 423 ---MSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRLDKSVAFVNKDV 479
              +  K+++ E    K++ + ++     +E    ++     A  KD  +K +    + +
Sbjct: 405 KKILEAKNVYEE--FLKAMNLFNQKLMEGKELIFFLR-----AYIKD--EKMIEAFKEHL 455

Query: 480 GP-KMSMYSSK-DKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLND 537
           G     ++ SK DK+    +   DL        SYR+          S +  L  +VLN 
Sbjct: 456 GQHNAGLFESKGDKF----VNTEDLGGI---LGSYRIYKDKGF---RSNQDALSKQVLNH 505

Query: 538 HWVSV---TSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKI 594
              S     S  ED  FK   ++ Y E+L+R ED+R+E+++L+E         E  L   
Sbjct: 506 VCYSFPLYASEEEDVQFK---RSAYMETLYRLEDERYEIELLIERGESLIFSFEVFLNSE 562

Query: 595 NNNTIKTDG----PIRVEDHFTALNL------RCIERLYGDHGLDVMDVLRKNASLALPV 644
            + + + DG     ++ E   + L++        I  +YGD G ++ + L      A+PV
Sbjct: 563 RSASAEKDGDGDEQLQDELDLSQLHMPAPLVNEMILFIYGDRGEEIFEELISKPRAAMPV 622

Query: 645 ILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEI 703
           IL R+ +    W     +  K+W +   + ++K+LD     FK  D K L  +  S  +
Sbjct: 623 ILKRMYKLIRYWKLELREKEKLWKDTNERAFYKALDFH-LDFKAIDKKYLNFRNFSKHL 680



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 40/94 (42%), Positives = 56/94 (59%), Gaps = 10/94 (10%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
           L  NDA+++L+ VK +F D    YD FLEVM+D+K  +ID  GV+     LFKG  D++ 
Sbjct: 172 LNLNDAISFLETVKTVFADDPSIYDSFLEVMRDYKHGKIDAGGVVRAATTLFKGKPDILE 231

Query: 103 GFNTFLPKGYEI------TLPLEDEQPPPKKPVE 130
           GFN FLP  Y+I       + +E    PP +P+E
Sbjct: 232 GFNDFLPPEYKIDRGNRRRMRME----PPGRPIE 261


>gi|2829873|gb|AAC00581.1| Hypothetical protein [Arabidopsis thaliana]
          Length = 162

 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 58/158 (36%), Positives = 88/158 (55%), Gaps = 25/158 (15%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
           LT +DA +Y+ AVK+ F D+  KY +F++++      R+D   VIARV+EL K H+DL+L
Sbjct: 10  LTKDDAHSYIIAVKETFHDEPTKYQEFIKLLNGVCDHRVDKYSVIARVEELMKDHQDLLL 69

Query: 103 GFNTFLPKGYEITLPLEDEQPPPKKPVEFEEAIN-----FVNKIKTRFQG-DDHVYKSFL 156
           GF+ FLP                  PV  E+ IN     FV+ ++TRFQ  D HV  +  
Sbjct: 70  GFSVFLP------------------PVSVEDFINKLKSKFVH-LQTRFQSLDTHVVGAIR 110

Query: 157 DILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFL 194
            ++ M+++   S+ EV +EV  +   H DL+E+F  F 
Sbjct: 111 GLMKMFKEGKMSVKEVQEEVIDVLFYHEDLIEDFLRFF 148


>gi|323450206|gb|EGB06089.1| hypothetical protein AURANDRAFT_9490, partial [Aureococcus
           anophagefferens]
          Length = 73

 Score = 91.7 bits (226), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 44/71 (61%), Positives = 54/71 (76%)

Query: 47  DALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNT 106
           DAL YL  VK  F D+ E Y++FLE+MK FK+Q IDT GVIARV  LF+G+  LI GFNT
Sbjct: 3   DALLYLDQVKAEFGDEPEIYNEFLEIMKSFKSQEIDTPGVIARVSTLFEGYGKLIYGFNT 62

Query: 107 FLPKGYEITLP 117
           FLP+GY+I +P
Sbjct: 63  FLPEGYKIDVP 73



 Score = 40.4 bits (93), Expect = 5.4,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 35/65 (53%)

Query: 132 EEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFT 191
           E+A+ +++++K  F  +  +Y  FL+I+  ++ +      V   V  LF+ +  L+  F 
Sbjct: 2   EDALLYLDQVKAEFGDEPEIYNEFLEIMKSFKSQEIDTPGVIARVSTLFEGYGKLIYGFN 61

Query: 192 HFLPD 196
            FLP+
Sbjct: 62  TFLPE 66


>gi|403161264|ref|XP_003321631.2| hypothetical protein PGTG_03168 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
 gi|375171194|gb|EFP77212.2| hypothetical protein PGTG_03168 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
          Length = 1837

 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 46/91 (50%), Positives = 56/91 (61%), Gaps = 3/91 (3%)

Query: 24  EPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDT 83
           EP  +TQ          + L   DAL+YL  VK  FQD+ + Y+ FL+VMK FK Q IDT
Sbjct: 4   EPPQETQ---ESSNNSYRTLNVRDALSYLDQVKVRFQDQNDVYNQFLDVMKLFKTQSIDT 60

Query: 84  AGVIARVKELFKGHRDLILGFNTFLPKGYEI 114
            GVI RV  LF+G+  LI GFNTFLP G+ I
Sbjct: 61  PGVIERVSTLFRGYPSLIQGFNTFLPPGFRI 91



 Score = 90.1 bits (222), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 87/380 (22%), Positives = 160/380 (42%), Gaps = 74/380 (19%)

Query: 350  SQELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNG 407
            ++E++  E ++  + D   + EFLR L LY + II    L   V   +G   +L++ F G
Sbjct: 864  TKEVALFESIRKFINDPDLWLEFLRVLDLYNRSIIDFKTLLDRVSVFIGDDDELLEDFKG 923

Query: 408  FLARCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDR 467
             +    K++ L+           EG +                     + R+ + RE+D+
Sbjct: 924  LVGYDVKNDGLV-----------EGEV--------------------WEIRNTDIRERDK 952

Query: 468  LDKSVAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQR 527
            +D S   + K+ GP                             SY+ LP+  +  + S R
Sbjct: 953  VDAST--IQKEYGP-----------------------------SYKRLPRAEIDLACSGR 981

Query: 528  TELGAEVLNDHWVSVTS-GSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKR 586
             EL   VLND +      G+E     H RK  +EE +   E +R      LE ++ T   
Sbjct: 982  DELCWSVLNDEYFGAAKFGTESGGPGH-RKTNFEEVVAMTEGERAHFSYWLECISRTIGH 1040

Query: 587  VEELLEKINNNTIKTDGPIRVEDHF----TALNLRCIERLY-GDHGLDVMDVLRKNASLA 641
            +E L  +I+    +      + D+      ++  R + ++Y   +   ++  LR   +  
Sbjct: 1041 LECLRARIDGMEDRDKASFTLGDNLGGSSPSIYHRTLRKVYESKYQSSILPYLRDYPANT 1100

Query: 642  LPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSA 701
            +P++L RLK+ +  W    S +N +W E+  KNY+K+ DH+   FK  +   L  + L  
Sbjct: 1101 IPIVLHRLKELELSWKSAESQWNLIWREVERKNYYKAQDHQVITFKSNEKSLLKGQNL-- 1158

Query: 702  EIKEISEKKRKEDDVLLAIA 721
             +KEI + K+ +  ++  ++
Sbjct: 1159 -LKEIHDLKKDQKALVYTVS 1177



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 40/84 (47%), Positives = 54/84 (64%), Gaps = 3/84 (3%)

Query: 122 QPPPK---KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEA 178
           QP P    KPVEF  AIN+VNKIK RF     +YK+FL+IL  Y+++   I  VY +V  
Sbjct: 392 QPQPNLNTKPVEFNYAINYVNKIKHRFIDQPEIYKTFLEILQTYQRDGMPIDSVYVKVTK 451

Query: 179 LFQDHPDLLEEFTHFLPDSSGAAS 202
           LF +  DLL+EF  FLPD + +++
Sbjct: 452 LFSNAADLLDEFKQFLPDLNASSA 475



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 20/67 (29%), Positives = 42/67 (62%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           +   +A+++++++K RFQ  + VY  FLD++ +++ ++     V + V  LF+ +P L++
Sbjct: 20  LNVRDALSYLDQVKVRFQDQNDVYNQFLDVMKLFKTQSIDTPGVIERVSTLFRGYPSLIQ 79

Query: 189 EFTHFLP 195
            F  FLP
Sbjct: 80  GFNTFLP 86



 Score = 44.7 bits (104), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 21/64 (32%), Positives = 34/64 (53%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFN 105
           N A+ Y+  +K  F D+ E Y  FLE+++ ++   +    V  +V +LF    DL+  F 
Sbjct: 405 NYAINYVNKIKHRFIDQPEIYKTFLEILQTYQRDGMPIDSVYVKVTKLFSNAADLLDEFK 464

Query: 106 TFLP 109
            FLP
Sbjct: 465 QFLP 468


>gi|328857457|gb|EGG06573.1| hypothetical protein MELLADRAFT_77776 [Melampsora larici-populina
           98AG31]
          Length = 1577

 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 47/95 (49%), Positives = 58/95 (61%), Gaps = 4/95 (4%)

Query: 20  SSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQ 79
           +S   P+  + VV        + L   DAL+YL  VK  FQD+ E Y+ FL+VMK FK Q
Sbjct: 25  TSTSIPNSDSTVVTSS----YRTLNVRDALSYLDQVKIRFQDQNEVYNQFLDVMKLFKTQ 80

Query: 80  RIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEI 114
            IDT GVI RV  LF+G+  LI GFNTFLP G+ I
Sbjct: 81  SIDTPGVIERVSSLFRGYPSLIQGFNTFLPSGFRI 115



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 49/127 (38%), Positives = 72/127 (56%), Gaps = 8/127 (6%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDL 186
           KPVEF  AIN+VNKIK RF     +YK+FL+IL  Y+++   I  VY +V  LF +  DL
Sbjct: 382 KPVEFNYAINYVNKIKHRFIDQPEIYKTFLEILQTYQRDGMPIDVVYVQVTKLFAEATDL 441

Query: 187 LEEFTHFLPDS---SGAASIHYVPSGRNSILRDRSSAMPTARQVH---VDKKERAMASHA 240
           L+EF  FLPD    +GA+ +  + +        +S+ M T++  H   +D  +R     A
Sbjct: 442 LDEFKQFLPDPNNENGASGVTMLKAQAPVPKPSQSTLMSTSQTPHSMLID--DRLSKPFA 499

Query: 241 DRDLSVD 247
           + DL+ D
Sbjct: 500 NSDLASD 506



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 42/63 (66%)

Query: 133 EAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTH 192
           +A+++++++K RFQ  + VY  FLD++ +++ ++     V + V +LF+ +P L++ F  
Sbjct: 48  DALSYLDQVKIRFQDQNEVYNQFLDVMKLFKTQSIDTPGVIERVSSLFRGYPSLIQGFNT 107

Query: 193 FLP 195
           FLP
Sbjct: 108 FLP 110



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 63/249 (25%), Positives = 98/249 (39%), Gaps = 66/249 (26%)

Query: 350 SQELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNG 407
           ++EL   E +K  L D   + EFLR L LY + II    L   V   +G   +L+D F G
Sbjct: 758 TKELILFESIKKYLNDTEVWHEFLRVLELYNQTIIDFKTLVDRVSVYIGDNDELLDDFKG 817

Query: 408 FLARCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDR 467
           F+    K + L+ D      +W                         +K+ D   RE+++
Sbjct: 818 FVGYDVKKDGLVED-----EVWE------------------------IKNLD--VREREK 846

Query: 468 LDKSVAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQR 527
           +D S+  + ++ G                             PSY+ LPK  +  + S R
Sbjct: 847 VDASI--IQREYG-----------------------------PSYKRLPKCEIDLACSGR 875

Query: 528 TELGAEVLNDHWVSVTS-GSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKR 586
            EL   VLND +      G+E     H RK  +EE +   E +R       ES++ T   
Sbjct: 876 DELCWSVLNDEYFGAAKFGTESGGPGH-RKTNFEEVIAMTEGERAHFSYWSESMSRTIGH 934

Query: 587 VEELLEKIN 595
           +E L  +I+
Sbjct: 935 LESLQTRID 943


>gi|387594203|gb|EIJ89227.1| hypothetical protein NEQG_01046 [Nematocida parisii ERTm3]
 gi|387595600|gb|EIJ93223.1| hypothetical protein NEPG_01565 [Nematocida parisii ERTm1]
          Length = 1026

 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 107/203 (52%), Gaps = 6/203 (2%)

Query: 511 SYRLLPKNYLIPSASQRTELGAEVLNDHWVSV-TSGSEDYSFKHMRKNQYEESLFRCEDD 569
           SYR+LP+ Y     + ++   A VLN  +V+  T  SE  +F   +KN +EE+LFR ED+
Sbjct: 544 SYRVLPEKYRHSMHTGQSSDDASVLNTGYVACPTFSSESSTFIFAKKNSHEEALFRIEDE 603

Query: 570 RFELDMLLESVNVTTKRVEE----LLEKINNNTIKTDGPIRVEDHFTALNLRCIERLYGD 625
           R+E D+LLE V+    ++ E    ++E  N +      PI      +AL+   I  +YG 
Sbjct: 604 RYECDVLLERVSSFILKLMEHEAIVIEDANVSKEHNKCPIP-PLKLSALDKDLISSVYGS 662

Query: 626 HGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFY 685
              D++  +  +   A+PVIL +L+  + +W + R+   +VW     KNY K+LD + + 
Sbjct: 663 SCDDIILGIIAHPIRAIPVILKQLRSIEAQWIKSRTASMEVWRAAVDKNYIKALDAKGYK 722

Query: 686 FKQQDSKSLGAKALSAEIKEISE 708
            +  + K+   K  + ++  ++E
Sbjct: 723 TRSSERKTTLLKQFTKDLDSLAE 745



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 34/78 (43%), Positives = 49/78 (62%)

Query: 37  GGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKG 96
            GG  K+   DA+ YL  VK+ +++ +E Y  FL+ MKD+K + I+   VI  +  +F G
Sbjct: 220 AGGNNKVQIKDAMRYLDVVKEEYKNNKEVYSKFLKTMKDYKDRHINAKTVIEIMLSIFNG 279

Query: 97  HRDLILGFNTFLPKGYEI 114
           ++ LI GFN FLPK YEI
Sbjct: 280 NQKLIQGFNQFLPKKYEI 297



 Score = 48.9 bits (115), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 2/72 (2%)

Query: 134 AINFVNKIKTRFQGDDHVYKSFLDILNMYR--KENKSITEVYQEVEALFQDHPDLLEEFT 191
            +N++NK++   + +   +  FL I+  Y+  +E K I+E+   ++ L +D P L+ EF 
Sbjct: 379 VVNYLNKVRKHLENNPSAWFEFLRIVQSYKNSREQKPISEILASIKVLLKDDPILISEFM 438

Query: 192 HFLPDSSGAASI 203
            FLP     A++
Sbjct: 439 VFLPPQEKRAAL 450



 Score = 42.7 bits (99), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 34/146 (23%), Positives = 64/146 (43%), Gaps = 8/146 (5%)

Query: 51  YLKAVKDIFQDKREKYDDFLEVMKDFKAQR--IDTAGVIARVKELFKGHRDLILGFNTFL 108
           YL  V+   ++    + +FL +++ +K  R     + ++A +K L K    LI  F  FL
Sbjct: 382 YLNKVRKHLENNPSAWFEFLRIVQSYKNSREQKPISEILASIKVLLKDDPILISEFMVFL 441

Query: 109 PKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKS 168
           P   +       ++PPP  P +    ++ +  I +R      VYK F+  LNM+ +   +
Sbjct: 442 PPQEKRAALRPGQRPPP--PADSLTMLHDIRNILSR----KGVYKEFVKALNMFNQGLLN 495

Query: 169 ITEVYQEVEALFQDHPDLLEEFTHFL 194
              +   VE   +    L   F +++
Sbjct: 496 TNALLLIVEPFLRGSSTLFSLFRYYI 521


>gi|297831460|ref|XP_002883612.1| hypothetical protein ARALYDRAFT_899184 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297835680|ref|XP_002885722.1| hypothetical protein ARALYDRAFT_899191 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297329452|gb|EFH59871.1| hypothetical protein ARALYDRAFT_899184 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297331562|gb|EFH61981.1| hypothetical protein ARALYDRAFT_899191 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 207

 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 51/155 (32%), Positives = 85/155 (54%), Gaps = 14/155 (9%)

Query: 42  KLTTNDALAYLKAVKDIFQD-KREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDL 100
           + T +DA++Y  AV D  QD +  K+ +FL + +DF+A+R+DT  V+AR++EL   H +L
Sbjct: 9   EFTIDDAVSYFLAVSDALQDDEPAKFQEFLNIFRDFEARRVDTPTVVARMEELLYDHFNL 68

Query: 101 ILGFNTFLPKGYEITLP------------LEDEQPPPKKPVEFEEAINFVNKIKTRFQGD 148
           +LG NTFLP  + IT+P            +  ++ PP KP    +A +++  +K  F  +
Sbjct: 69  LLGLNTFLPVEFWITIPPVARKESGQFQKVVGKRLPPPKPT-MGDATSYIAALKEAFHDE 127

Query: 149 DHVYKSFLDILNMYRKENKSITEVYQEVEALFQDH 183
              Y+  L +LN ++        V   V+ L +DH
Sbjct: 128 PAKYEEILKLLNNFKARRVDAASVIARVDELLKDH 162



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 33/73 (45%), Positives = 47/73 (64%), Gaps = 1/73 (1%)

Query: 26  SGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAG 85
           SGQ Q V G       K T  DA +Y+ A+K+ F D+  KY++ L+++ +FKA+R+D A 
Sbjct: 92  SGQFQKVVGKRLP-PPKPTMGDATSYIAALKEAFHDEPAKYEEILKLLNNFKARRVDAAS 150

Query: 86  VIARVKELFKGHR 98
           VIARV EL K H+
Sbjct: 151 VIARVDELLKDHQ 163


>gi|32563631|ref|NP_492284.2| Protein SIN-3, isoform a [Caenorhabditis elegans]
 gi|27753090|emb|CAB04052.2| Protein SIN-3, isoform a [Caenorhabditis elegans]
          Length = 1505

 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 69/273 (25%), Positives = 128/273 (46%), Gaps = 19/273 (6%)

Query: 473  AFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGA 532
            A + KD+         +D+ + + ++ ++ +      PSYR + K+      S R EL  
Sbjct: 766  AVMRKDLPAIQPKRGLRDQKMLQQVKNVEAATVCTLGPSYRFM-KDTKATDCSGRVELDD 824

Query: 533  E---VLNDHWVSVTS-GSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVE 588
            +   VLND W S+ S  SED   + ++K+  EE  F+ ED+R+ELD++++S     +++ 
Sbjct: 825  DLKGVLNDTWTSIPSWSSEDTGSQAIKKSNLEEFHFKTEDERYELDIIVDSNRTVIEQLS 884

Query: 589  ELLEKINNNTIKTDGPIRVEDHFTA----LNLRCIERLYGDHGLDVMDVLRKNASLALPV 644
            + L      + +     +++    A      +R + +++ +   D +D  +KN  + L  
Sbjct: 885  KTLRDYEAMSDEDKKSFKLDKWLNASSRSTTIRVLAKVFTNSAQDFIDAAQKNPLVGLRR 944

Query: 645  ILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIK 704
            IL  LK+K   W+R + D N+ W +   K    +    +   K  D K+  +K L  +I+
Sbjct: 945  ILESLKEKDLLWSRFQQDTNRTWRDALDKQMSAATTILNNQHKNYDQKAFKSKPLVNQIE 1004

Query: 705  EISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYS 737
            +I E++RK           N     PHL  EY+
Sbjct: 1005 QICEERRK----------NNSTDTSPHLILEYT 1027



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 39/72 (54%), Positives = 49/72 (68%)

Query: 45  TNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGF 104
            ++ALAYL+ +K  F      Y  FLE+MKDF+AQRI+T  VI +V EL     +L+LGF
Sbjct: 286 VDEALAYLRVIKSTFSSDVPVYHRFLEIMKDFRAQRIETPDVIEQVAELLYDSPELVLGF 345

Query: 105 NTFLPKGYEITL 116
           NTFLP GY ITL
Sbjct: 346 NTFLPTGYRITL 357



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 39/71 (54%)

Query: 125 PKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHP 184
           P+ P   +EA+ ++  IK+ F  D  VY  FL+I+  +R +     +V ++V  L  D P
Sbjct: 280 PEGPPRVDEALAYLRVIKSTFSSDVPVYHRFLEIMKDFRAQRIETPDVIEQVAELLYDSP 339

Query: 185 DLLEEFTHFLP 195
           +L+  F  FLP
Sbjct: 340 ELVLGFNTFLP 350


>gi|193202520|ref|NP_001122442.1| Protein SIN-3, isoform b [Caenorhabditis elegans]
 gi|148472944|emb|CAN86581.1| Protein SIN-3, isoform b [Caenorhabditis elegans]
          Length = 1507

 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 69/273 (25%), Positives = 128/273 (46%), Gaps = 19/273 (6%)

Query: 473  AFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGA 532
            A + KD+         +D+ + + ++ ++ +      PSYR + K+      S R EL  
Sbjct: 766  AVMRKDLPAIQPKRGLRDQKMLQQVKNVEAATVCTLGPSYRFM-KDTKATDCSGRVELDD 824

Query: 533  E---VLNDHWVSVTS-GSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVE 588
            +   VLND W S+ S  SED   + ++K+  EE  F+ ED+R+ELD++++S     +++ 
Sbjct: 825  DLKGVLNDTWTSIPSWSSEDTGSQAIKKSNLEEFHFKTEDERYELDIIVDSNRTVIEQLS 884

Query: 589  ELLEKINNNTIKTDGPIRVEDHFTA----LNLRCIERLYGDHGLDVMDVLRKNASLALPV 644
            + L      + +     +++    A      +R + +++ +   D +D  +KN  + L  
Sbjct: 885  KTLRDYEAMSDEDKKSFKLDKWLNASSRSTTIRVLAKVFTNSAQDFIDAAQKNPLVGLRR 944

Query: 645  ILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIK 704
            IL  LK+K   W+R + D N+ W +   K    +    +   K  D K+  +K L  +I+
Sbjct: 945  ILESLKEKDLLWSRFQQDTNRTWRDALDKQMSAATTILNNQHKNYDQKAFKSKPLVNQIE 1004

Query: 705  EISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYS 737
            +I E++RK           N     PHL  EY+
Sbjct: 1005 QICEERRK----------NNSTDTSPHLILEYT 1027



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 39/72 (54%), Positives = 49/72 (68%)

Query: 45  TNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGF 104
            ++ALAYL+ +K  F      Y  FLE+MKDF+AQRI+T  VI +V EL     +L+LGF
Sbjct: 286 VDEALAYLRVIKSTFSSDVPVYHRFLEIMKDFRAQRIETPDVIEQVAELLYDSPELVLGF 345

Query: 105 NTFLPKGYEITL 116
           NTFLP GY ITL
Sbjct: 346 NTFLPTGYRITL 357



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 39/71 (54%)

Query: 125 PKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHP 184
           P+ P   +EA+ ++  IK+ F  D  VY  FL+I+  +R +     +V ++V  L  D P
Sbjct: 280 PEGPPRVDEALAYLRVIKSTFSSDVPVYHRFLEIMKDFRAQRIETPDVIEQVAELLYDSP 339

Query: 185 DLLEEFTHFLP 195
           +L+  F  FLP
Sbjct: 340 ELVLGFNTFLP 350


>gi|238580069|ref|XP_002389181.1| hypothetical protein MPER_11727 [Moniliophthora perniciosa FA553]
 gi|215451167|gb|EEB90111.1| hypothetical protein MPER_11727 [Moniliophthora perniciosa FA553]
          Length = 406

 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 42/72 (58%), Positives = 51/72 (70%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
           L   DAL+YL  VK  F D+ + Y+ FL++MK+FK Q+IDT GVI RV  LF+GH  LI 
Sbjct: 36  LDVTDALSYLDHVKVQFYDQPDVYNHFLDIMKEFKGQQIDTPGVIKRVSHLFQGHPFLIQ 95

Query: 103 GFNTFLPKGYEI 114
           GFNTFLP GY I
Sbjct: 96  GFNTFLPAGYRI 107



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 40/69 (57%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDL 186
           +P++  +A+++++ +K +F     VY  FLDI+  ++ +      V + V  LFQ HP L
Sbjct: 34  RPLDVTDALSYLDHVKVQFYDQPDVYNHFLDIMKEFKGQQIDTPGVIKRVSHLFQGHPFL 93

Query: 187 LEEFTHFLP 195
           ++ F  FLP
Sbjct: 94  IQGFNTFLP 102



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 4/69 (5%)

Query: 132 EEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI--TEVYQEVEALFQDHPDLLEE 189
           E A+ +V KIK R   D  VYK FLDIL+ Y    ++I   EV +++  LF++ PDL  +
Sbjct: 187 EPAVAYVQKIKQR--CDPEVYKQFLDILSRYHHAPETIDEEEVSRQIARLFKNAPDLRAD 244

Query: 190 FTHFLPDSS 198
           F  F+P+ S
Sbjct: 245 FRIFMPEQS 253


>gi|297811639|ref|XP_002873703.1| hypothetical protein ARALYDRAFT_350641 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297319540|gb|EFH49962.1| hypothetical protein ARALYDRAFT_350641 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 107

 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 43/73 (58%), Positives = 58/73 (79%)

Query: 44  TTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILG 103
           TT+DALAY+  VKD F+D+RE YD F  +M +FKA+RID + + AR+K+LFK H++LI+G
Sbjct: 20  TTSDALAYIWQVKDTFRDQRENYDMFRMLMFNFKAKRIDQSTLYARLKKLFKEHKNLIIG 79

Query: 104 FNTFLPKGYEITL 116
           FNTFLP G +I L
Sbjct: 80  FNTFLPLGDKIIL 92


>gi|397639842|gb|EJK73795.1| hypothetical protein THAOC_04562, partial [Thalassiosira oceanica]
          Length = 699

 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 83/322 (25%), Positives = 144/322 (44%), Gaps = 40/322 (12%)

Query: 496 PIQELDL-SNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSV-----TSGSEDY 549
           P++E  L S+ +  T +Y   P +Y+ P  S +TE   + LN    S+     T G   Y
Sbjct: 62  PLREESLGSSAKPVTVNYTTYPSDYVPPKCSGKTEHERKNLNGKCFSMPRDYPTRGERHY 121

Query: 550 SFKHM------RKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKT-- 601
           +   +      R+N YEE + R ED+  E+DM +E  N +  R    L  I +  +    
Sbjct: 122 ASPELYDGVKDRRNAYEEVMCRVEDEMAEVDMAIER-NASAMRA---LRPIRDEAVSLAE 177

Query: 602 ----DG-PI-RVE-----DHFTALNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLK 650
               DG PI R++         ++++  I R+YG+ G +V+  LR N    +P++ +RLK
Sbjct: 178 QEERDGMPIGRLQYKLKLGSLNSVHIGAIARVYGESGDEVIQHLRLNPIAVVPIVYSRLK 237

Query: 651 QKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKK 710
           +K  EW + + D N+ W    + N+  S D +   +K++  KS     L    K  ++  
Sbjct: 238 EKDAEWRKVKKDLNRGWKAALTDNHEGSFDVKCVSYKREIEKSFSEDRLIERAKSFAKNP 297

Query: 711 RK-----EDDVLLA----IAAGNR--RSIVPHLEFEYSDPDIHEDLYQLIKYSCGEMCTT 759
            K        ++L     + A N       PHL    S    H+D + L++    ++   
Sbjct: 298 SKIPQHPATTMMLPNFHLVNATNPILGLFQPHLSVLESANMPHKDAFGLLETYINKVGPK 357

Query: 760 EQLDKVMKIWTTFLEPMLGVPS 781
           +  + V    + F+EP  G+P+
Sbjct: 358 KMKEAVSSFRSAFVEPWFGLPA 379


>gi|428182907|gb|EKX51766.1| hypothetical protein GUITHDRAFT_134126 [Guillardia theta CCMP2712]
          Length = 354

 Score = 89.7 bits (221), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 57/167 (34%), Positives = 95/167 (56%), Gaps = 20/167 (11%)

Query: 48  ALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRD-LILGFNT 106
           A+ YL AV+   +  + ++ +FLE +++FK Q+I T  V+ R+K++F G  + LI+GFN 
Sbjct: 25  AMDYLHAVEK--ELSKNEFSEFLETIEEFKHQKISTQLVVKRIKKIFSGKSNALIVGFNL 82

Query: 107 FLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRF-QGDDHVYKSFLDILNMYRKE 165
           FLP  + I            K  ++  A++ V KI+ RF Q    + + F+ IL  ++++
Sbjct: 83  FLPVEHHI------------KTEKYLVALDLVKKIRDRFEQTKPGIMEKFVSILGKFQED 130

Query: 166 NKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNS 212
           + S+ E  ++V+ LF+ H DLL++F  FLP S    S    PS  NS
Sbjct: 131 SLSLDEAKKQVKVLFRGHHDLLQDFDDFLPLSEDEGS----PSASNS 173


>gi|8778866|gb|AAF79865.1|AC000348_18 T7N9.30 [Arabidopsis thaliana]
          Length = 90

 Score = 89.4 bits (220), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 44/80 (55%), Positives = 54/80 (67%)

Query: 35  GGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELF 94
            G G   K T +DA AY++ VK  F +  +KYDDF+ +MK+FKA++ID    I  VKEL 
Sbjct: 2   AGEGSKPKATVDDAYAYIRTVKSTFHNDPDKYDDFMAIMKNFKARKIDRNTCIEEVKELL 61

Query: 95  KGHRDLILGFNTFLPKGYEI 114
           KGHRDLI GFN FLPK  EI
Sbjct: 62  KGHRDLISGFNAFLPKCLEI 81


>gi|443920368|gb|ELU40303.1| Pkinase domain-containing protein [Rhizoctonia solani AG-1 IA]
          Length = 522

 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 40/68 (58%), Positives = 48/68 (70%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           VEF +A+N+VNKIK RF  D   YK FL+IL  Y+KE + I EVYQ+V  LF  H DLLE
Sbjct: 2   VEFNQAVNYVNKIKQRFASDPDTYKQFLEILQTYQKEQQPIAEVYQKVNVLFDHHRDLLE 61

Query: 189 EFTHFLPD 196
           +  HFLPD
Sbjct: 62  DLQHFLPD 69



 Score = 45.1 bits (105), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 21/64 (32%), Positives = 34/64 (53%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFN 105
           N A+ Y+  +K  F    + Y  FLE+++ ++ ++   A V  +V  LF  HRDL+    
Sbjct: 5   NQAVNYVNKIKQRFASDPDTYKQFLEILQTYQKEQQPIAEVYQKVNVLFDHHRDLLEDLQ 64

Query: 106 TFLP 109
            FLP
Sbjct: 65  HFLP 68


>gi|395750669|ref|XP_002828917.2| PREDICTED: paired amphipathic helix protein Sin3b-like, partial
           [Pongo abelii]
          Length = 124

 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 46/87 (52%), Positives = 55/87 (63%), Gaps = 2/87 (2%)

Query: 33  GGGGGGGAQKLTTN--DALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARV 90
           G  G  G +KL  +  DAL YL  VK  F      Y+ FLE+MK+FK+Q IDT GVI RV
Sbjct: 24  GRSGSAGHEKLPVHVEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRV 83

Query: 91  KELFKGHRDLILGFNTFLPKGYEITLP 117
            +LF  H DLI+GFN FLP GY I +P
Sbjct: 84  SQLFHEHPDLIVGFNAFLPLGYRIDIP 110



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 41/70 (58%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           K PV  E+A+ +++++K RF  D   Y  FL+I+  ++ ++     V + V  LF +HPD
Sbjct: 33  KLPVHVEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRVSQLFHEHPD 92

Query: 186 LLEEFTHFLP 195
           L+  F  FLP
Sbjct: 93  LIVGFNAFLP 102


>gi|256087697|ref|XP_002580001.1| sin3b [Schistosoma mansoni]
 gi|353231315|emb|CCD77733.1| putative sin3b [Schistosoma mansoni]
          Length = 1396

 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 42/72 (58%), Positives = 51/72 (70%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
           L   DAL+YL  VK  F  +   Y DFL+VM+DFKAQ I T  VI RV+ELF+GH DLI 
Sbjct: 5   LKVEDALSYLDQVKARFSGQGAIYMDFLDVMRDFKAQTIGTEVVIRRVRELFEGHPDLIT 64

Query: 103 GFNTFLPKGYEI 114
           GFNTF+P+GY +
Sbjct: 65  GFNTFIPQGYRM 76



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 39/81 (48%), Positives = 49/81 (60%), Gaps = 9/81 (11%)

Query: 131 FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENK---------SITEVYQEVEALFQ 181
           F  A+ +VNKIK RFQG   VYK FLDIL  Y+KE +         +  +VYQ+V  LF 
Sbjct: 227 FHHALQYVNKIKNRFQGIPDVYKRFLDILQWYQKEQRHSDPMCRKQAELQVYQDVAKLFG 286

Query: 182 DHPDLLEEFTHFLPDSSGAAS 202
              DLL+EF+ FLP+S G  S
Sbjct: 287 GQEDLLQEFSQFLPESFGVTS 307



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 36/83 (43%), Positives = 52/83 (62%), Gaps = 3/83 (3%)

Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSAS--QRTELGAEVLNDHWVSVTS-GSEDYSFKHMR 555
           +LD +    C  SYR LP N+     S  Q+  +  EVLND ++S +S  SED  F   +
Sbjct: 502 DLDFTKLRTCGVSYRALPSNFPQSKCSGRQKCPVAKEVLNDSYISFSSLTSEDSQFVSSK 561

Query: 556 KNQYEESLFRCEDDRFELDMLLE 578
           KNQYEE+++R ED+R+E+DM+ E
Sbjct: 562 KNQYEENMYRVEDERYEVDMVTE 584



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 42/69 (60%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDL 186
           K ++ E+A+++++++K RF G   +Y  FLD++  ++ +      V + V  LF+ HPDL
Sbjct: 3   KCLKVEDALSYLDQVKARFSGQGAIYMDFLDVMRDFKAQTIGTEVVIRRVRELFEGHPDL 62

Query: 187 LEEFTHFLP 195
           +  F  F+P
Sbjct: 63  ITGFNTFIP 71


>gi|76156084|gb|AAX27318.2| SJCHGC08823 protein [Schistosoma japonicum]
          Length = 224

 Score = 87.4 bits (215), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 43/75 (57%), Positives = 52/75 (69%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
           L   DAL+YL  VK  F  +   Y DFL+VM+DFKAQ I T  VI RV+ELF+GH DLI 
Sbjct: 5   LKVEDALSYLDQVKARFSGQGAIYMDFLDVMRDFKAQTIGTEVVIRRVRELFEGHPDLIT 64

Query: 103 GFNTFLPKGYEITLP 117
           GFNTF+P+GY +  P
Sbjct: 65  GFNTFIPQGYRMDAP 79



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/69 (31%), Positives = 42/69 (60%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDL 186
           K ++ E+A+++++++K RF G   +Y  FLD++  ++ +      V + V  LF+ HPDL
Sbjct: 3   KCLKVEDALSYLDQVKARFSGQGAIYMDFLDVMRDFKAQTIGTEVVIRRVRELFEGHPDL 62

Query: 187 LEEFTHFLP 195
           +  F  F+P
Sbjct: 63  ITGFNTFIP 71


>gi|357444335|ref|XP_003592445.1| Paired amphipathic helix protein Sin3 [Medicago truncatula]
 gi|355481493|gb|AES62696.1| Paired amphipathic helix protein Sin3 [Medicago truncatula]
          Length = 119

 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 45/95 (47%), Positives = 62/95 (65%), Gaps = 5/95 (5%)

Query: 36  GGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFK 95
           G  G + LT  +A+A++  VK  FQDKREKY++FL+++ D++AQ ID  GV  R+++LFK
Sbjct: 5   GDAGQKLLTMEEAIAFVSDVKVKFQDKREKYNEFLKILGDYRAQIIDIEGVTTRIEDLFK 64

Query: 96  GHRDLILGFNTFLPKGYEITLPLED-----EQPPP 125
           GH DLIL F  FLP    I+   E+     EQ PP
Sbjct: 65  GHSDLILKFKYFLPNRSGISDDTEEKEEDSEQNPP 99



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 44/76 (57%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           +K +  EEAI FV+ +K +FQ     Y  FL IL  YR +   I  V   +E LF+ H D
Sbjct: 9   QKLLTMEEAIAFVSDVKVKFQDKREKYNEFLKILGDYRAQIIDIEGVTTRIEDLFKGHSD 68

Query: 186 LLEEFTHFLPDSSGAA 201
           L+ +F +FLP+ SG +
Sbjct: 69  LILKFKYFLPNRSGIS 84


>gi|357486319|ref|XP_003613447.1| Histone deacetylase complex SIN3 component [Medicago truncatula]
 gi|355514782|gb|AES96405.1| Histone deacetylase complex SIN3 component [Medicago truncatula]
          Length = 166

 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 54/147 (36%), Positives = 82/147 (55%), Gaps = 6/147 (4%)

Query: 51  YLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLP- 109
           Y+  VK  FQ     Y  FL++++ ++ +  +   VI  V  LF+GH DLI  F  FLP 
Sbjct: 24  YVMKVKTRFQHAGHVYSSFLDILQMYRQKEKNLDEVIREVAILFQGHDDLIHEFANFLPL 83

Query: 110 KGYEITLPLEDEQPPPKKPV-EFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKS 168
           + Y    P + ++    +PV ++E  + F+ K+KTRFQ   HVY  F D+L MY +  KS
Sbjct: 84  RAY----PPKMKRTYADRPVVDYEYGLRFMMKVKTRFQDARHVYSLFQDMLKMYIEREKS 139

Query: 169 ITEVYQEVEALFQDHPDLLEEFTHFLP 195
           + ++   V  LF+ H DL++ F  FLP
Sbjct: 140 LDDIIWAVSLLFEGHEDLIDGFIDFLP 166



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 37/67 (55%), Positives = 48/67 (71%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           V++E    +V K+KTRFQ   HVY SFLDIL MYR++ K++ EV +EV  LFQ H DL+ 
Sbjct: 16  VDYEYVARYVMKVKTRFQHAGHVYSSFLDILQMYRQKEKNLDEVIREVAILFQGHDDLIH 75

Query: 189 EFTHFLP 195
           EF +FLP
Sbjct: 76  EFANFLP 82



 Score = 41.6 bits (96), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 24/62 (38%), Positives = 33/62 (53%)

Query: 48  ALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTF 107
            L ++  VK  FQD R  Y  F +++K +  +      +I  V  LF+GH DLI GF  F
Sbjct: 105 GLRFMMKVKTRFQDARHVYSLFQDMLKMYIEREKSLDDIIWAVSLLFEGHEDLIDGFIDF 164

Query: 108 LP 109
           LP
Sbjct: 165 LP 166


>gi|15223464|ref|NP_174043.1| paired amphipathic helix repeat-containing protein [Arabidopsis
           thaliana]
 gi|8778868|gb|AAF79867.1|AC000348_20 T7N9.32 [Arabidopsis thaliana]
 gi|9802521|gb|AAF99723.1|AC004557_2 F17L21.3 [Arabidopsis thaliana]
 gi|332192676|gb|AEE30797.1| paired amphipathic helix repeat-containing protein [Arabidopsis
           thaliana]
          Length = 186

 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 60/168 (35%), Positives = 94/168 (55%), Gaps = 21/168 (12%)

Query: 44  TTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILG 103
           T +DA +Y+ AVK+ F D+  KY++F+++M D +   +D A  IA++ EL KGH  L+ G
Sbjct: 11  TLSDAHSYITAVKEAFHDEPTKYEEFIKLMNDIRDHGVDKASGIAKLTELIKGHPRLLRG 70

Query: 104 FNTFLPK-----GYEI--TLPLEDEQP-PPKKPVEFEEAI------------NFVNKIKT 143
            + F P+      +E   T+ L+D+   PP+      ++             NF+N +KT
Sbjct: 71  LSFFFPQVNRDIHHEAKRTIILKDKATIPPEAAYRGAKSTYTKIKQIEPDWENFMNMLKT 130

Query: 144 RFQG-DDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEF 190
           RF+  D HV +SFL I+ MY +  KS  EV +EV  L   H DL+++F
Sbjct: 131 RFRSLDTHVVESFLKIMIMYDEGKKSEKEVQEEVVDLLYYHEDLIDKF 178


>gi|358337870|dbj|GAA56196.1| paired amphipathic helix protein Sin3a [Clonorchis sinensis]
          Length = 1458

 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 40/81 (49%), Positives = 53/81 (65%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
           L   DAL+YL  VK+ F  +   Y DFL+VM++FK Q I T  VI RV+ELF+GH DLI+
Sbjct: 5   LKVEDALSYLDEVKERFAGQGAIYTDFLDVMREFKMQTIGTEVVIRRVRELFEGHTDLIV 64

Query: 103 GFNTFLPKGYEITLPLEDEQP 123
           GFN F+P+ Y +  P+    P
Sbjct: 65  GFNNFIPQAYRMDAPVSRCPP 85



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 69/219 (31%), Positives = 98/219 (44%), Gaps = 35/219 (15%)

Query: 367 YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLARCEKSEELLADVMSKK 426
           YQ FL+ L+L+ +  ++  EL   V  L  R+PD+                 L D +S  
Sbjct: 447 YQTFLQALNLFNRNELSADELLQSVRPLFPRHPDVW--------------RRLCDTVSSA 492

Query: 427 SLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRLDKSVAFVNKDV--GPKMS 484
           S    G    S    +RDR++           DRE R       S   +  D   GP ++
Sbjct: 493 SPTGHG----SAVASERDREK----------HDREFRLLSSNVPSAYDIQPDANPGPPLT 538

Query: 485 MYSSKDKYLAKPIQELDLS--NCERCTPSYRLLPKNYLIPSASQRTE--LGAEVLNDHWV 540
              S    L    + LDL       C  SYR LP N+     S R +  +  EVLND ++
Sbjct: 539 GGGSAIPLLDVGHKRLDLDFMKLRTCGTSYRALPSNFPQSKCSGRLKCPIAREVLNDSYI 598

Query: 541 SVTS-GSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLE 578
           S +S  SED  F   +KNQYEE ++R ED+R+E+DM+ E
Sbjct: 599 SFSSLTSEDSQFVSSKKNQYEEHMYRVEDERYEVDMVTE 637



 Score = 72.8 bits (177), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/80 (43%), Positives = 48/80 (60%), Gaps = 9/80 (11%)

Query: 131 FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI---------TEVYQEVEALFQ 181
           F  A+++VNKIK RFQG  + Y+ FLDIL  Y++E +            +VYQ+V  LF 
Sbjct: 221 FNHALHYVNKIKNRFQGVPNAYQRFLDILQWYQREQRHADPSRRKLAEKQVYQDVAKLFD 280

Query: 182 DHPDLLEEFTHFLPDSSGAA 201
              DLL+EF  FLP+S+G  
Sbjct: 281 GQEDLLQEFGQFLPESTGVT 300



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 21/71 (29%), Positives = 43/71 (60%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDL 186
           K ++ E+A+++++++K RF G   +Y  FLD++  ++ +      V + V  LF+ H DL
Sbjct: 3   KYLKVEDALSYLDEVKERFAGQGAIYTDFLDVMREFKMQTIGTEVVIRRVRELFEGHTDL 62

Query: 187 LEEFTHFLPDS 197
           +  F +F+P +
Sbjct: 63  IVGFNNFIPQA 73



 Score = 42.0 bits (97), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 5/89 (5%)

Query: 147 GDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYV 206
           G D  Y++FL  LN++ +   S  E+ Q V  LF  HPD+       +  +S       V
Sbjct: 442 GSDRAYQTFLQALNLFNRNELSADELLQSVRPLFPRHPDVWRRLCDTVSSASPTGHGSAV 501

Query: 207 PSGRNSILRDR-----SSAMPTARQVHVD 230
            S R+    DR     SS +P+A  +  D
Sbjct: 502 ASERDREKHDREFRLLSSNVPSAYDIQPD 530


>gi|15223467|ref|NP_174046.1| paired amphipathic helix repeat-containing protein [Arabidopsis
           thaliana]
 gi|9802523|gb|AAF99725.1|AC004557_4 F17L21.5 [Arabidopsis thaliana]
 gi|332192679|gb|AEE30800.1| paired amphipathic helix repeat-containing protein [Arabidopsis
           thaliana]
          Length = 241

 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 65/168 (38%), Positives = 87/168 (51%), Gaps = 24/168 (14%)

Query: 30  QVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIAR 89
           +VVG          T +DA +YL AVK+ F D+  KY +  +++ D KA+RI+ A VIAR
Sbjct: 96  KVVGRSVPPAVAVPTMDDATSYLNAVKEAFHDEPAKYMEITKLLTDLKARRINAASVIAR 155

Query: 90  VKELFKGHRDLILGFNTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGD- 148
           ++EL K H +L+LGF  FL               P ++         F+ K+K RF GD 
Sbjct: 156 MEELLKDHLNLLLGFCVFL--------------SPTRR---------FITKLKARFLGDG 192

Query: 149 DHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLPD 196
             V  S L IL M+ + NKS  E  QEV AL Q H DLL E +    D
Sbjct: 193 SQVVDSVLQILRMHSEGNKSKDEASQEVRALIQGHEDLLMELSEIFSD 240


>gi|297704012|ref|XP_002828918.1| PREDICTED: paired amphipathic helix protein Sin3b-like, partial
           [Pongo abelii]
          Length = 483

 Score = 86.3 bits (212), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 74/230 (32%), Positives = 103/230 (44%), Gaps = 40/230 (17%)

Query: 351 QELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGF 408
           QE SF +KV+  L+    Y+ FLRC+ L+ +E+++ SEL  LV   LG++P+L   F  F
Sbjct: 230 QEFSFFDKVRRVLKSQEVYENFLRCIALFNQELVSGSELLQLVSPFLGKFPELFAQFKSF 289

Query: 409 LARCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRL 468
           L   E S    A  MS +S                         DG+  R+ +     R+
Sbjct: 290 LGVKELS---FAPPMSDRS------------------------GDGI-SREIDYASCKRI 321

Query: 469 DKSVAFVNKDV-GPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQR 527
             S   + K    PK S  ++  K L            + C   ++       IP  S  
Sbjct: 322 GSSYRALPKTYQQPKCSGRTAICKELDHWTLLQGSWTDDYCMSKFK---NTCWIPGYS-- 376

Query: 528 TELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLL 577
               A VLND WVS  S SED +F   +K  YEE L RCED+RFE+ +LL
Sbjct: 377 ----AGVLNDTWVSFPSWSEDSTFVSSKKTPYEEQLHRCEDERFEVCVLL 422



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/117 (36%), Positives = 61/117 (52%), Gaps = 16/117 (13%)

Query: 116 LPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKEN--------- 166
           +PLE +       VEF  AI++VNKIKTRF     +Y+SFL+IL+ Y+KE          
Sbjct: 77  VPLESDS------VEFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLNTRGRPFR 130

Query: 167 -KSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMP 222
             S  EV+ EV  LF+   DLL EF  FLP++  +      P   +S+ ++     P
Sbjct: 131 GMSEEEVFTEVANLFRGQEDLLSEFGQFLPEAKRSLFTGNGPCEMHSVQKNEHDKTP 187



 Score = 63.2 bits (152), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 30/63 (47%), Positives = 42/63 (66%)

Query: 644 VILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEI 703
           V +  LK K+EEW   +  FNK+W E Y K Y KSLDH++  FKQ D+K+L +K+L  EI
Sbjct: 418 VCVLLLKAKEEEWREAQQGFNKIWREQYEKAYLKSLDHQAVNFKQNDTKALRSKSLLNEI 477

Query: 704 KEI 706
           + +
Sbjct: 478 ESV 480



 Score = 58.2 bits (139), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 50/218 (22%), Positives = 87/218 (39%), Gaps = 61/218 (27%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAG----------VIARVKELFK 95
           N+A++Y+  +K  F D  E Y  FLE++  ++ ++++T G          V   V  LF+
Sbjct: 87  NNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLNTRGRPFRGMSEEEVFTEVANLFR 146

Query: 96  GHRDLILGFNTFLPKG----YEITLPLE---------DEQP-----------------PP 125
           G  DL+  F  FLP+     +    P E         D+ P                 P 
Sbjct: 147 GQEDLLSEFGQFLPEAKRSLFTGNGPCEMHSVQKNEHDKTPEHSRKRSRPSLLRPVSAPA 206

Query: 126 KKPVEFE----------------EAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI 169
           KK ++                  +  +F +K++ R      VY++FL  + ++ +E  S 
Sbjct: 207 KKKMKLRGTKDLSIAAVGKYGTLQEFSFFDKVR-RVLKSQEVYENFLRCIALFNQELVSG 265

Query: 170 TEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVP 207
           +E+ Q V       P+L  +F  FL    G   + + P
Sbjct: 266 SELLQLVSPFLGKFPELFAQFKSFL----GVKELSFAP 299


>gi|297850916|ref|XP_002893339.1| hypothetical protein ARALYDRAFT_889979 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339181|gb|EFH69598.1| hypothetical protein ARALYDRAFT_889979 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 178

 Score = 86.3 bits (212), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 58/157 (36%), Positives = 84/157 (53%), Gaps = 24/157 (15%)

Query: 47  DALAYLKAVKDIFQDKR-EKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFN 105
           DA++Y++AV+D  +D   EKY++FL    DF A RI  A   A ++EL K H +L+LGFN
Sbjct: 3   DAMSYIEAVRDALEDAEPEKYEEFLRTFLDFGADRIGIAAFSASIQELLKDHVNLLLGFN 62

Query: 106 TFLPKGYEITLPLEDE--------QPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLD 157
            FLP  ++IT+PLE          +  P KP   E+A +++  +K  F      +KS   
Sbjct: 63  VFLPLEFQITIPLEASTEFHKVVGRSVPPKPA-MEDATSYLIAVKKAFH-----FKSLCR 116

Query: 158 ILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFL 194
           I       + +I  V   VE L +DH +LL  F  FL
Sbjct: 117 I-------DAAI--VIARVEELMKDHLNLLLCFCVFL 144


>gi|148907554|gb|ABR16907.1| unknown [Picea sitchensis]
          Length = 106

 Score = 85.9 bits (211), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 50/105 (47%), Positives = 65/105 (61%), Gaps = 13/105 (12%)

Query: 38  GGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGH 97
           GG+++L T++ LAY  A KD F +     +   E  KD K ++I+    I+ VKEL KGH
Sbjct: 13  GGSKRLITDEDLAYANADKDTFTEALVYVNAVKETFKDRK-EKINKVDAISMVKELLKGH 71

Query: 98  RDLILGFNTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIK 142
            DL+LGFNTFLPKG E TLPL+            EEAIN+VNKI+
Sbjct: 72  HDLLLGFNTFLPKGCEFTLPLD------------EEAINYVNKIR 104


>gi|384493568|gb|EIE84059.1| hypothetical protein RO3G_08764 [Rhizopus delemar RA 99-880]
          Length = 406

 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 80/140 (57%), Gaps = 24/140 (17%)

Query: 613 ALNLRCIERLYGD-HGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIY 671
           A+  R ++++YG   G++++ +L  N + ++P++L RLKQK+EEW R + ++NK+W E+ 
Sbjct: 22  AVYQRILKKIYGPVKGIEIIKLLHNNPAQSVPIVLKRLKQKEEEWRRAQREWNKIWREVE 81

Query: 672 SKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPH 731
           +KNY KSLD++   FK  D K+L  ++L      +SE ++ E                  
Sbjct: 82  AKNYWKSLDYKGIMFKMTDRKALTTRSL------VSEAEKAE-----------------R 118

Query: 732 LEFEYSDPDIHEDLYQLIKY 751
            EF + D  I +D+ +LI +
Sbjct: 119 FEFNFQDKSIFKDVSRLIYF 138


>gi|170097239|ref|XP_001879839.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164645242|gb|EDR09490.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 420

 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 83/269 (30%), Positives = 117/269 (43%), Gaps = 31/269 (11%)

Query: 10  MNSQIKRPMISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDF 69
           ++ QI    + S  EP     +V   G    + L   DAL+YL AVK  F ++ + Y+ F
Sbjct: 10  ISPQISNTQLPSVSEPVA-PMLVDDLGYSLDRPLNAIDALSYLDAVKVQFSEQPDVYNHF 68

Query: 70  LEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLEDEQPPPKKPV 129
           L++MK+FK + IDT GVI RV  LF GH  LI GFNTFLP GY I     D     + P+
Sbjct: 69  LDIMKEFKNE-IDTPGVIKRVSHLFNGHPSLIQGFNTFLPVGYRIECS-TDAHDLLQSPL 126

Query: 130 EFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEE 189
                     +I  R +G        L  +   R    +  EV +++  LF++  DL  +
Sbjct: 127 LVVPRCRL--RITDREKGPFFGQPQRLREVCSGRMVGLTTEEVSRQIAKLFKNACDLRAD 184

Query: 190 FTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQVHVDKKERAMASHADRDLSVDRP 249
           F  F+PD             R+  L D   A P       DK  R +   A+   +    
Sbjct: 185 FRVFMPD-------------RSQQLMDDGPARPRP-GTPSDKNRRKLDIVANSSSTA--- 227

Query: 250 DPDHDRVLLKSDKDQRRRGEKERERRDDH 278
                     S K +R+  EKE ER+  H
Sbjct: 228 ---------LSQKRKRKVPEKEEERKPKH 247


>gi|268568288|ref|XP_002640211.1| C. briggsae CBR-SIN-3 protein [Caenorhabditis briggsae]
          Length = 1544

 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/248 (26%), Positives = 117/248 (47%), Gaps = 9/248 (3%)

Query: 473  AFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGA 532
            A   KD+ P       +D+   +  + ++ +      PSYRL+ K+    + S R EL  
Sbjct: 890  AVTRKDLPPVQPKRGLRDQKQLQQTRTVEAATVCTLGPSYRLM-KDSKEAACSGRVELEP 948

Query: 533  ---EVLNDHWVSVTS-GSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVE 588
               E LND W S  S  SED   + ++K+  EE  FR ED+R+ELD++++S     + +E
Sbjct: 949  DIKETLNDKWTSYPSWSSEDTGNQAIKKSNLEEFHFRTEDERYELDIIVDSNRTIMEELE 1008

Query: 589  ELLEKINNNTIKTDGPIRVEDHFT----ALNLRCIERLYGDHGLDVMDVLRKNASLALPV 644
            + L  I   +       ++ D       A  LR + ++Y +   +++   ++   + L  
Sbjct: 1009 KTLTDIEAMSDAERRAFQLNDSLNCTSRATFLRVMTKIYTNSVPELVQAAKEKPVVGLKK 1068

Query: 645  ILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIK 704
            I+  L++K   W R + D N+ W +   K    SL   +   K  D K+  +K L + I+
Sbjct: 1069 IIEGLQEKDAAWTRFQQDANRAWRDALDKQMTTSLSLMNNQQKNYDQKAFKSKPLVSAIE 1128

Query: 705  EISEKKRK 712
            +I E ++K
Sbjct: 1129 QIFEDRKK 1136



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 32/72 (44%), Positives = 52/72 (72%)

Query: 45  TNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGF 104
            ++AL+YL+ +K+ F ++   Y  FL++MK+F+AQRI+T+ V+ +V  L     +L+LGF
Sbjct: 429 VDEALSYLRIIKETFVNRVPVYHRFLDIMKNFRAQRIETSEVVEQVAALLYDSPNLVLGF 488

Query: 105 NTFLPKGYEITL 116
           NTFLP GY+I +
Sbjct: 489 NTFLPTGYKIAM 500



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 41/80 (51%)

Query: 124 PPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDH 183
           P   P   +EA++++  IK  F     VY  FLDI+  +R +    +EV ++V AL  D 
Sbjct: 422 PDNGPPRVDEALSYLRIIKETFVNRVPVYHRFLDIMKNFRAQRIETSEVVEQVAALLYDS 481

Query: 184 PDLLEEFTHFLPDSSGAASI 203
           P+L+  F  FLP     A +
Sbjct: 482 PNLVLGFNTFLPTGYKIAML 501


>gi|357444321|ref|XP_003592438.1| Paired amphipathic helix protein Sin3 [Medicago truncatula]
 gi|355481486|gb|AES62689.1| Paired amphipathic helix protein Sin3 [Medicago truncatula]
          Length = 804

 Score = 85.5 bits (210), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 38/76 (50%), Positives = 57/76 (75%)

Query: 47  DALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNT 106
           +A++++  VK +FQ++REKYD+FL+++ DF A+RID A V   + EL K H+ LI  FN 
Sbjct: 704 EAVSFVMEVKHVFQNRREKYDEFLKILDDFSAERIDRAAVKEGMTELLKDHKGLISRFNI 763

Query: 107 FLPKGYEITLPLEDEQ 122
           FLP G EI+LPL+D++
Sbjct: 764 FLPPGQEISLPLDDDE 779


>gi|253722515|pdb|2CZY|A Chain A, Solution Structure Of The NrsfREST-Msin3b Pah1 Complex
          Length = 77

 Score = 85.1 bits (209), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 41/71 (57%), Positives = 48/71 (67%)

Query: 47  DALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNT 106
           DAL YL  VK  F      Y+ FLE+MK+FK+Q IDT GVI RV +LF  H DLI+GFN 
Sbjct: 6   DALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRVSQLFHEHPDLIVGFNA 65

Query: 107 FLPKGYEITLP 117
           FLP GY I +P
Sbjct: 66  FLPLGYRIDIP 76



 Score = 58.2 bits (139), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 24/68 (35%), Positives = 40/68 (58%)

Query: 128 PVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLL 187
           PV  E+A+ +++++K RF  D   Y  FL+I+  ++ ++     V + V  LF +HPDL+
Sbjct: 1   PVHVEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRVSQLFHEHPDLI 60

Query: 188 EEFTHFLP 195
             F  FLP
Sbjct: 61  VGFNAFLP 68


>gi|308505354|ref|XP_003114860.1| CRE-SIN-3 protein [Caenorhabditis remanei]
 gi|308259042|gb|EFP02995.1| CRE-SIN-3 protein [Caenorhabditis remanei]
          Length = 1648

 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 73/287 (25%), Positives = 137/287 (47%), Gaps = 29/287 (10%)

Query: 465  KDRLDKSV-AFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPS 523
            KD+ +  V A + KD+ P       +D+ + + ++ +D +      PSYRLL        
Sbjct: 822  KDKPENDVDAVMRKDMPPVQQKIGIRDQKMIQQVRTIDAATVCTLGPSYRLLKGGARGKE 881

Query: 524  ASQRTELGAEV---LNDHWVSVTS-GSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLES 579
               R ++  +V   LND W S  S  SED   + ++K+  EE  F+ E++R+ELD++++S
Sbjct: 882  TFGRIDMSRDVQGVLNDKWTSYPSWSSEDTGSQTVKKSNLEEFHFKTEEERYELDIVVDS 941

Query: 580  VNVTTKRVEELLEKINN---------NTIKTDGPIRVEDHFTALNLRCIERLYGDHGLDV 630
             N T   +EEL + + N         N+ K D  +     + +  LR + +++ +   + 
Sbjct: 942  -NRTI--MEELSKTLRNFQTMSEEEKNSFKLDANLNCS--YRSTFLRVMTKVFTNSVHEY 996

Query: 631  MDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQD 690
            ++  +KN    L  I+  L++K  +W R + + N+ W +   K    ++   +   K  D
Sbjct: 997  VEAAQKNPLAGLKKIIDGLQEKHIQWTRFQQEANRTWRDALDKQMSSAMTLLNNQQKNYD 1056

Query: 691  SKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYS 737
             K+  +K L   I+++ E++RK          G+    +PH+  EYS
Sbjct: 1057 QKAFKSKPLVNAIEQVYEERRK--------TGGD--ETLPHMTLEYS 1093



 Score = 83.2 bits (204), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 38/72 (52%), Positives = 48/72 (66%)

Query: 45  TNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGF 104
            ++ALAYL+ +K  F      Y  FLE+MKDF+AQRI+T  VI +V EL     DL+LGF
Sbjct: 350 VDEALAYLRIIKQTFSSNVPIYHKFLEIMKDFRAQRIETPDVIEQVAELLYESPDLVLGF 409

Query: 105 NTFLPKGYEITL 116
           NTFLP GY I +
Sbjct: 410 NTFLPAGYRIEM 421



 Score = 43.9 bits (102), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 5/88 (5%)

Query: 132 EEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFT 191
           +EA+ ++  IK  F  +  +Y  FL+I+  +R +     +V ++V  L  + PDL+  F 
Sbjct: 351 DEALAYLRIIKQTFSSNVPIYHKFLEIMKDFRAQRIETPDVIEQVAELLYESPDLVLGFN 410

Query: 192 HFLP-----DSSGAASIHYVPSGRNSIL 214
            FLP     + SG   +   P+    +L
Sbjct: 411 TFLPAGYRIEMSGTKYVFNSPTSAPRVL 438


>gi|341896663|gb|EGT52598.1| hypothetical protein CAEBREN_05778 [Caenorhabditis brenneri]
          Length = 1639

 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 46/126 (36%), Positives = 68/126 (53%), Gaps = 8/126 (6%)

Query: 45  TNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGF 104
            ++ALAYL+ +K+ F      Y  FL++MK+F+AQRI+T  VI +V EL     +L+LGF
Sbjct: 463 VDEALAYLRVIKNTFAQDVPVYHQFLDIMKNFRAQRIETPDVIEQVAELLYNTPELVLGF 522

Query: 105 NTFLPKGYEITL------PLEDEQPPPKKPVE--FEEAINFVNKIKTRFQGDDHVYKSFL 156
           NTFLP G++IT+           Q  P++     F E +  V  IKT F         FL
Sbjct: 523 NTFLPNGFKITIMEAGRYVFSSPQAEPRETPSDMFLETLRIVELIKTSFAARPGKIVDFL 582

Query: 157 DILNMY 162
             ++ +
Sbjct: 583 TFMDFF 588



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/251 (23%), Positives = 114/251 (45%), Gaps = 9/251 (3%)

Query: 473  AFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGA 532
            A + KD+ P       +D+ + + ++ ++ +      PSYRLL K+      S R EL  
Sbjct: 824  AVLRKDLPPVQPKRGLRDQKMIQQVKNVEAATVCTIGPSYRLL-KDTKPVECSGRNELDP 882

Query: 533  EV---LNDHWVSVTS-GSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVE 588
            E+   LND W+S  S  SED   + ++K   EE   + E++R+E D++++S     + + 
Sbjct: 883  EIKATLNDKWMSYPSWSSEDVGTQAIKKTNLEEFHTKTEEERYEFDIIIDSNKAVLEDLA 942

Query: 589  ELLEKINNNTIKTDGPIRVEDHFT----ALNLRCIERLYGDHGLDVMDVLRKNASLALPV 644
            ++L      + +     ++ D       A   R + ++Y ++   ++D ++ N    L  
Sbjct: 943  KVLRDYEALSDEERRKFKLNDILNCSSRATFNRVMTKVYNNNATSIIDAVKTNVREGLTK 1002

Query: 645  ILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIK 704
            ++  L ++   W   + D NK+W E   +    + +      K  D K    K L   I+
Sbjct: 1003 LIAALTERDSNWVAFQQDTNKIWREALERQMAAANNLLHTQQKNNDQKGFKVKPLMTAIE 1062

Query: 705  EISEKKRKEDD 715
            +  E+K+  +D
Sbjct: 1063 QAYEEKKSAED 1073



 Score = 47.8 bits (112), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 37/69 (53%)

Query: 128 PVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLL 187
           P   +EA+ ++  IK  F  D  VY  FLDI+  +R +     +V ++V  L  + P+L+
Sbjct: 460 PPRVDEALAYLRVIKNTFAQDVPVYHQFLDIMKNFRAQRIETPDVIEQVAELLYNTPELV 519

Query: 188 EEFTHFLPD 196
             F  FLP+
Sbjct: 520 LGFNTFLPN 528


>gi|323449566|gb|EGB05453.1| hypothetical protein AURANDRAFT_9312 [Aureococcus anophagefferens]
          Length = 65

 Score = 84.3 bits (207), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 40/63 (63%), Positives = 47/63 (74%)

Query: 47  DALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNT 106
           DAL YL  VK  F DK E Y++FL++MK+FKAQ IDT GVI +V  LF G+  LILGFNT
Sbjct: 3   DALLYLDQVKIAFGDKPEIYNEFLDIMKNFKAQEIDTPGVIQQVSHLFHGYNKLILGFNT 62

Query: 107 FLP 109
           FLP
Sbjct: 63  FLP 65



 Score = 42.0 bits (97), Expect = 1.7,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 34/64 (53%)

Query: 132 EEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFT 191
           E+A+ +++++K  F     +Y  FLDI+  ++ +      V Q+V  LF  +  L+  F 
Sbjct: 2   EDALLYLDQVKIAFGDKPEIYNEFLDIMKNFKAQEIDTPGVIQQVSHLFHGYNKLILGFN 61

Query: 192 HFLP 195
            FLP
Sbjct: 62  TFLP 65


>gi|297831462|ref|XP_002883613.1| hypothetical protein ARALYDRAFT_899185 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297329453|gb|EFH59872.1| hypothetical protein ARALYDRAFT_899185 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 145

 Score = 84.3 bits (207), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 46/135 (34%), Positives = 77/135 (57%), Gaps = 14/135 (10%)

Query: 42  KLTTNDALAYLKAVKDIFQDKR-EKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDL 100
           + T +DA++Y  AV D  QD    K+ +FL + +DF+A+R+DT  V+AR++EL   H +L
Sbjct: 9   EFTIDDAVSYFLAVSDALQDDEPAKFQEFLNIFRDFEARRVDTPTVVARMEELLYDHFNL 68

Query: 101 ILGFNTFLPKGYEITLP------------LEDEQPPPKKPVEFEEAINFVNKIKTRFQGD 148
           +LG NTFLP  + IT+P            +  ++ PP KP    +A +++  +K  F  +
Sbjct: 69  LLGLNTFLPVEFWITIPPVARKESGQFQKVVGKRLPPPKPT-MGDATSYIAALKEAFHDE 127

Query: 149 DHVYKSFLDILNMYR 163
              Y+  L +LN ++
Sbjct: 128 PAKYEKILKLLNNFK 142


>gi|393235878|gb|EJD43430.1| PAH2 domain-containing protein [Auricularia delicata TFB-10046 SS5]
          Length = 263

 Score = 84.3 bits (207), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 51/171 (29%), Positives = 84/171 (49%), Gaps = 19/171 (11%)

Query: 45  TNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKA-QRIDTAGVIARVKELFKGHRDLILG 103
            ++A +YL  ++  FQD    Y  F+ +M  F+   +I T+ V+ RV  LF GH  LI  
Sbjct: 87  VSEARSYLNTIQAEFQDYPGVYQRFISIMTQFETDSQISTSDVVERVVTLFSGHPGLIER 146

Query: 104 FNTFLPKGYEI---------TLP---------LEDEQPPPKKPVEFEEAINFVNKIKTRF 145
           F  FLP G+ I         T+P         L    P  +  ++  EA+ +++ +K R 
Sbjct: 147 FILFLPSGFHIRCEGASVSVTIPSATRGHDGGLVLPLPASEPELDLTEALLYLDLVKARV 206

Query: 146 QGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLPD 196
                VY  F +++  +++E   +  V   V +LF ++PDL++ F  FLPD
Sbjct: 207 DDRREVYNKFCNLMLQFKREEIDMPGVLHRVSSLFANYPDLIDGFNVFLPD 257



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 34/73 (46%), Positives = 44/73 (60%)

Query: 42  KLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLI 101
           +L   +AL YL  VK    D+RE Y+ F  +M  FK + ID  GV+ RV  LF  + DLI
Sbjct: 189 ELDLTEALLYLDLVKARVDDRREVYNKFCNLMLQFKREEIDMPGVLHRVSSLFANYPDLI 248

Query: 102 LGFNTFLPKGYEI 114
            GFN FLP GY++
Sbjct: 249 DGFNVFLPDGYQL 261


>gi|297850928|ref|XP_002893345.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297339187|gb|EFH69604.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 90

 Score = 84.0 bits (206), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 41/80 (51%), Positives = 51/80 (63%)

Query: 35  GGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELF 94
            G G   K T +DA AYL+ VK  F + R+KY+DF+ +M +FKA+       I  VK+L 
Sbjct: 2   AGEGSKPKATIDDAYAYLRTVKSTFHNDRDKYEDFIVIMNNFKARNFTRNACIEEVKDLL 61

Query: 95  KGHRDLILGFNTFLPKGYEI 114
           KGHRDLI GFN FLPK  EI
Sbjct: 62  KGHRDLISGFNAFLPKCLEI 81



 Score = 42.4 bits (98), Expect = 1.4,   Method: Composition-based stats.
 Identities = 20/70 (28%), Positives = 36/70 (51%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           K     ++A  ++  +K+ F  D   Y+ F+ I+N ++  N +     +EV+ L + H D
Sbjct: 7   KPKATIDDAYAYLRTVKSTFHNDRDKYEDFIVIMNNFKARNFTRNACIEEVKDLLKGHRD 66

Query: 186 LLEEFTHFLP 195
           L+  F  FLP
Sbjct: 67  LISGFNAFLP 76


>gi|297850926|ref|XP_002893344.1| hypothetical protein ARALYDRAFT_472682 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339186|gb|EFH69603.1| hypothetical protein ARALYDRAFT_472682 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 194

 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/181 (31%), Positives = 91/181 (50%), Gaps = 31/181 (17%)

Query: 44  TTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILG 103
           + +DA +Y+ AVK+ F D+  KY++F+++M D +   +D A  ++ + EL KGH  L+ G
Sbjct: 11  SLSDAHSYITAVKEAFHDEPTKYEEFIKLMIDIRDHTVDKATGLSNMTELIKGHPRLLRG 70

Query: 104 FNTFLPK-----------------GYEITLPLEDEQPPP------------KKPVEFEEA 134
            + F P+                    I L  E   PP             +K +E +  
Sbjct: 71  LSFFFPQVKRSISPKANNTIHHEANRTIILKAEATNPPEAEHRGAKSKYTIRKRIEHDWE 130

Query: 135 INFVNKIKTRFQG-DDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHF 193
            NF+N +KTRF+  D HV +SFL I+ M+ +  KS  EV +EV  L   H DL+++F  +
Sbjct: 131 -NFMNMLKTRFRSLDTHVVESFLKIMIMHNEGKKSEKEVQEEVVDLLYYHEDLIDKFFRY 189

Query: 194 L 194
            
Sbjct: 190 F 190


>gi|393235882|gb|EJD43434.1| hypothetical protein AURDEDRAFT_114753 [Auricularia delicata
           TFB-10046 SS5]
          Length = 191

 Score = 82.0 bits (201), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 58/167 (34%), Positives = 80/167 (47%), Gaps = 10/167 (5%)

Query: 44  TTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILG 103
           T +D L YL  ++  F  +   YD FL ++ D + +RI    VI RV  LF  + DLI G
Sbjct: 27  TQDDVLQYLYKIQAHFPARPGVYDTFLALITDLREERIPV--VIERVIVLFANYPDLIEG 84

Query: 104 FNTFLPKGYEI---TLPLEDEQPPPK--KPV--EFEEAINFVNKIKTRFQGDDHVYKSFL 156
           F  FLP  Y I   T    D  P P    P    +  A+++VN++K RF      Y  FL
Sbjct: 85  FRVFLPAHYRIKDATWYTVDTSPKPSDWDPNFGTYYVALDYVNRVKWRFADQCDKYMEFL 144

Query: 157 DILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASI 203
            IL  YR +N    +V   +  LF  H DLL+ F  F+     A ++
Sbjct: 145 AILQAYR-DNADAVDVLCNITRLFHGHDDLLQAFKRFMSCEPNAVAM 190



 Score = 44.3 bits (103), Expect = 0.35,   Method: Composition-based stats.
 Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 3/72 (4%)

Query: 124 PPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDH 183
           P ++P + ++ + ++ KI+  F     VY +FL ++   R+E   I  V + V  LF ++
Sbjct: 22  PKRQPTQ-DDVLQYLYKIQAHFPARPGVYDTFLALITDLREER--IPVVIERVIVLFANY 78

Query: 184 PDLLEEFTHFLP 195
           PDL+E F  FLP
Sbjct: 79  PDLIEGFRVFLP 90


>gi|341885221|gb|EGT41156.1| hypothetical protein CAEBREN_32127 [Caenorhabditis brenneri]
          Length = 1689

 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 35/72 (48%), Positives = 51/72 (70%)

Query: 45  TNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGF 104
            ++ALAYL+ +K+ F      Y  FL++MK+F+AQRI+T  VI +V EL     +L+LGF
Sbjct: 468 VDEALAYLRVIKNTFAQDVPVYHQFLDIMKNFRAQRIETPDVIEQVAELLYNTPELVLGF 527

Query: 105 NTFLPKGYEITL 116
           NTFLP G++IT+
Sbjct: 528 NTFLPNGFKITI 539



 Score = 76.3 bits (186), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/251 (23%), Positives = 113/251 (45%), Gaps = 9/251 (3%)

Query: 473  AFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGA 532
            A + KD+ P       +D+ + + ++ ++ +      PSYRLL     I   S R EL  
Sbjct: 937  AVLRKDLPPVQPKRGLRDQKMIQQVKNVEAATVCTIGPSYRLLKDTKPI-ECSGRNELDP 995

Query: 533  EV---LNDHWVSVTS-GSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVE 588
            E+   LND W+S  S  SED   + ++K   EE   + E++R+E D++++S     + + 
Sbjct: 996  EIKATLNDKWMSYPSWSSEDVGTQAIKKTNLEEFHTKTEEERYEFDIIIDSNKAVLEDLA 1055

Query: 589  ELLEKINNNTIKTDGPIRVEDHFT----ALNLRCIERLYGDHGLDVMDVLRKNASLALPV 644
            ++L      + +     ++ D       A   R + ++Y ++   ++D ++ N    L  
Sbjct: 1056 KVLRDYEALSDEERRKFKLNDILNCSSRATFNRVMTKVYNNNATSIIDAVKTNVREGLTK 1115

Query: 645  ILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIK 704
            ++  L ++   W   + D NK+W E   +    + +      K  D K    K L   I+
Sbjct: 1116 LIAALTERDSNWVAFQQDTNKIWREALERQMAAANNLLHTQQKNNDQKGFKVKPLMTAIE 1175

Query: 705  EISEKKRKEDD 715
            +  E+K+  +D
Sbjct: 1176 QAYEEKKAAED 1186



 Score = 47.8 bits (112), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 37/69 (53%)

Query: 128 PVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLL 187
           P   +EA+ ++  IK  F  D  VY  FLDI+  +R +     +V ++V  L  + P+L+
Sbjct: 465 PPRVDEALAYLRVIKNTFAQDVPVYHQFLDIMKNFRAQRIETPDVIEQVAELLYNTPELV 524

Query: 188 EEFTHFLPD 196
             F  FLP+
Sbjct: 525 LGFNTFLPN 533


>gi|429965729|gb|ELA47726.1| hypothetical protein VCUG_00808 [Vavraia culicis 'floridensis']
          Length = 871

 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 143/592 (24%), Positives = 243/592 (41%), Gaps = 110/592 (18%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           K+ +   +AI+F+  +KT F  D  +Y SFL+++  Y+        V +    LF+  P+
Sbjct: 149 KEDLNLNDAISFLETVKTVFSEDPSIYDSFLEVMRDYKHGKIDAGGVVRAATTLFKGKPE 208

Query: 186 LLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQVHVDKKERAMASHADRDLS 245
           +LE F  FLP        + +  G    +R      P  R       ER + SH   +  
Sbjct: 209 ILEGFNDFLPPE------YKIDRGNRRRMRMEPPGRPIERM-----NERFIPSH---ERM 254

Query: 246 VDRPDPDHDRVLLKSDKDQRRRGEKERERRDDHRRERERDDRDFENDVNRDFSMQRFPHK 305
           +DRP+   DR+         R GE+                                PH 
Sbjct: 255 MDRPERITDRI------PPDRMGERP------------------------------VPHD 278

Query: 306 RKSARKIEDSTAEPLHQGGEGDENFGMHPVSSSYDDKNAMKSMFSQELSFCEKVKDKLRD 365
           R   ++I           G        +P  +++D + A +   +  L+F +KVK KL +
Sbjct: 279 RIIPKEIPKVIDAKQFVPGN-------NPPINAWDGQQAEEQTVA--LNFIKKVKSKLNN 329

Query: 366 D--YQEFLRCLHLYTKEIITRSEL-QSLVGDLLGRYPDLMDGFNGFLARCEKSEELLADV 422
              Y++F+  L  Y K   T+ EL  + +  +LG   DL++ F  F+ + E S   LA+V
Sbjct: 330 MKLYKDFIEALTHYQK---TKDELVLAKIKKILGDNRDLIEEFLTFMPKGEDSA--LAEV 384

Query: 423 ---MSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRLDKSVAFVNKDV 479
              +  K+++ E    K++ + ++     RE    ++     A  KD  +K +    + +
Sbjct: 385 KKILEAKNVYEE--FLKAMNLFNQKLMEGRELIFFLR-----AYIKD--EKMIEAFKEHL 435

Query: 480 GP-KMSMYSSK-DKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLND 537
           G     ++ SK DK+    +   DL        SYR+          S +  L  +VLN 
Sbjct: 436 GQHNAGLFESKGDKF----VNTEDLGGI---LGSYRIYKDKGF---RSNQDSLSRQVLNH 485

Query: 538 HWVSV---TSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELL--E 592
              S     S  ED  FK   ++ Y E+L+R ED+R+E+++L+E         E  L  E
Sbjct: 486 ICYSFPLYASEEEDVQFK---RSAYMETLYRLEDERYEIELLIERGESLIFSFEVFLNSE 542

Query: 593 KINN--NTIKTDGPIRVEDHFTALNLR--------CIERLYGDHGLDVMDVLRKNASLAL 642
           +  N  N    +G  +++D      L          +  +YGD G ++ + L      A+
Sbjct: 543 RSKNAENDYTGEGDDQLQDELDLSQLHMPAPLVNELVLFVYGDRGEEIFEELIGKPRAAM 602

Query: 643 PVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSL 694
           PVIL R+ +    W     +  K+W +   + ++K+LD     FK  D K L
Sbjct: 603 PVILKRMYKLIRYWKLELREKEKLWKDTNERAFYKALDFH-LDFKAADKKYL 653



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 38/94 (40%), Positives = 56/94 (59%), Gaps = 10/94 (10%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
           L  NDA+++L+ VK +F +    YD FLEVM+D+K  +ID  GV+     LFKG  +++ 
Sbjct: 152 LNLNDAISFLETVKTVFSEDPSIYDSFLEVMRDYKHGKIDAGGVVRAATTLFKGKPEILE 211

Query: 103 GFNTFLPKGYEI------TLPLEDEQPPPKKPVE 130
           GFN FLP  Y+I       + +E    PP +P+E
Sbjct: 212 GFNDFLPPEYKIDRGNRRRMRME----PPGRPIE 241



 Score = 42.4 bits (98), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 37/125 (29%), Positives = 64/125 (51%), Gaps = 8/125 (6%)

Query: 18  MISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFK 77
           +I ++    G    +    G  A++ T   AL ++K VK    + +  Y DF+E +  + 
Sbjct: 288 VIDAKQFVPGNNPPINAWDGQQAEEQTV--ALNFIKKVKSKLNNMK-LYKDFIEALTHY- 343

Query: 78  AQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLEDEQPPPKKPV--EFEEAI 135
            Q+     V+A++K++   +RDLI  F TF+PKG +  L  E ++    K V  EF +A+
Sbjct: 344 -QKTKDELVLAKIKKILGDNRDLIEEFLTFMPKGEDSALA-EVKKILEAKNVYEEFLKAM 401

Query: 136 NFVNK 140
           N  N+
Sbjct: 402 NLFNQ 406


>gi|170100591|ref|XP_001881513.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164643472|gb|EDR07724.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 141

 Score = 81.3 bits (199), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 41/89 (46%), Positives = 52/89 (58%)

Query: 37  GGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKG 96
           GG    L  +DA+ YL  VK  F DK E Y  FL+ M++F+  RID AGVI R+  LF G
Sbjct: 31  GGSDGPLDMSDAMTYLDTVKLEFLDKPEVYCQFLDTMREFRVLRIDCAGVIERLGTLFYG 90

Query: 97  HRDLILGFNTFLPKGYEITLPLEDEQPPP 125
              L+ GFN FLP+GY I +  +   P P
Sbjct: 91  KPALLEGFNMFLPRGYRIDISTDPRNPYP 119



 Score = 42.7 bits (99), Expect = 0.98,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 33/68 (48%)

Query: 128 PVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLL 187
           P++  +A+ +++ +K  F     VY  FLD +  +R        V + +  LF   P LL
Sbjct: 36  PLDMSDAMTYLDTVKLEFLDKPEVYCQFLDTMREFRVLRIDCAGVIERLGTLFYGKPALL 95

Query: 188 EEFTHFLP 195
           E F  FLP
Sbjct: 96  EGFNMFLP 103


>gi|168010414|ref|XP_001757899.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162690776|gb|EDQ77141.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 372

 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 58/175 (33%), Positives = 92/175 (52%), Gaps = 27/175 (15%)

Query: 51  YLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGV-------IARVKELFK---GHRDL 100
           +L+ VKD F+D   +Y+ +   + D K     +  +       + RV+++FK    H DL
Sbjct: 117 FLRIVKDAFRDDAARYELWKNAVTDIKLHYNKSGNLTLIIPIAVRRVRDIFKDHPQHPDL 176

Query: 101 ILGFNTFLPKGYEITLPLEDEQPPPKK------------PVEFEEAINFVNKIKTRFQGD 148
           I GFN ++P GYEI LPLE+ +  PK             P  + EAI FV+KI      +
Sbjct: 177 ISGFNVWIP-GYEIALPLEEVENEPKPFGDSEGESETRPPDWYHEAIKFVDKILNLPDSE 235

Query: 149 DHVYKSFLDILNMYRK---ENKSITEVYQEVEALFQDHPDLLEEFT-HFLPDSSG 199
            ++YK F + +  ++     + S+TE+ ++V ALF +  DLL+EFT  +LP   G
Sbjct: 236 QYLYKKFREDVCTFQNWPVTSVSVTELQRQVAALFANREDLLQEFTVWYLPCLLG 290


>gi|159163889|pdb|2CR7|A Chain A, Solution Structure Of The First Pah Domain Of The Mouse
           Transcriptional Repressor Sin3b
          Length = 80

 Score = 81.3 bits (199), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 40/76 (52%), Positives = 48/76 (63%)

Query: 36  GGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFK 95
           G  G+  +   DAL YL  VK  F      Y+ FLE+MK+FK+Q IDT GVI RV +LF 
Sbjct: 1   GSSGSSGVHVEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRVSQLFH 60

Query: 96  GHRDLILGFNTFLPKG 111
            H DLI+GFN FLP G
Sbjct: 61  EHPDLIVGFNAFLPSG 76



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 2/74 (2%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           V  E+A+ +++++K RF  D   Y  FL+I+  ++ ++     V + V  LF +HPDL+ 
Sbjct: 8   VHVEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRVSQLFHEHPDLIV 67

Query: 189 EFTHFLPDSSGAAS 202
            F  FLP  SG +S
Sbjct: 68  GFNAFLP--SGPSS 79


>gi|168010616|ref|XP_001758000.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162690877|gb|EDQ77242.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 313

 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 58/175 (33%), Positives = 90/175 (51%), Gaps = 27/175 (15%)

Query: 51  YLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGV-------IARVKELFK---GHRDL 100
           +L+ VKD F+D   +Y+ +   + D K     +  +       + RV+++FK    H DL
Sbjct: 117 FLRIVKDAFRDDAARYELWKNAVTDIKLHYNKSGNLTLIIPIAVRRVRDIFKDHPQHPDL 176

Query: 101 ILGFNTFLPKGYEITLPLEDEQPPPKK------------PVEFEEAINFVNKIKTRFQGD 148
           I GFN ++P GYEI LPLE+ +  PK             P  + EAI FV+KI      +
Sbjct: 177 ISGFNVWIP-GYEIALPLEEVENEPKPFGDSEGESETRPPDWYHEAIKFVDKILNLPDSE 235

Query: 149 DHVYKSF---LDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFT-HFLPDSSG 199
            ++YK F   +     +   + S+TE+ ++V ALF +  DLL+EFT  +LP   G
Sbjct: 236 QYLYKKFREDVCTFQNWPVTSVSVTELQRQVAALFANREDLLQEFTVWYLPCLLG 290


>gi|300709333|ref|XP_002996832.1| hypothetical protein NCER_100020 [Nosema ceranae BRL01]
 gi|239606158|gb|EEQ83161.1| hypothetical protein NCER_100020 [Nosema ceranae BRL01]
          Length = 816

 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 104/207 (50%), Gaps = 13/207 (6%)

Query: 502 LSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSV-TSGSEDYSFKHMRKNQYE 560
           L  C++   SYR+L +    P+   +  +  EVLN   VS  T  SED +F  +++N YE
Sbjct: 404 LDKCKKIG-SYRILSREIQNPN---QDAIAKEVLNTTCVSCPTFESEDANFVFLKRNMYE 459

Query: 561 ESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFTALNL--RC 618
           + +FR EDDR E  +++E ++     +E +   +       +G + ++D   +  +    
Sbjct: 460 DCIFRVEDDRSETSLIIERLDFFITSLELVYSNLQ------EGELSIKDLGMSPGIIKEV 513

Query: 619 IERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKS 678
           ++ +Y D   +V++ +      A+PV++ RL    +E        NKVW E   ++++K+
Sbjct: 514 LKTIYEDSATEVLEGILSLPKTAIPVVIKRLYSVNKEVREKMRQKNKVWNEQVERSFYKA 573

Query: 679 LDHRSFYFKQQDSKSLGAKALSAEIKE 705
           LD    ++K Q+  +   KAL  E +E
Sbjct: 574 LDTNGLFYKNQEKNNFSTKALLQEAEE 600



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/63 (42%), Positives = 37/63 (58%)

Query: 47  DALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNT 106
           DA+ +L  +KD + +    YD+FLE M+D+K  +ID   V   VK LFK    LI  FN 
Sbjct: 81  DAMVFLNRIKDEYSEDMVTYDNFLETMRDYKFGKIDADEVCKGVKILFKDKPYLIDIFNE 140

Query: 107 FLP 109
           +LP
Sbjct: 141 YLP 143



 Score = 47.4 bits (111), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 43/65 (66%), Gaps = 2/65 (3%)

Query: 132 EEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFT 191
           ++A +F+ ++K R+    ++YKSF+DIL  +  ++ +++ +  E+  L  +HPDL+E+F 
Sbjct: 261 KQANDFIQRVKKRYSHQPNIYKSFVDILQKFSSDS-NVSSIRSEISTLLWEHPDLIEDFE 319

Query: 192 H-FLP 195
             F+P
Sbjct: 320 KDFIP 324



 Score = 41.6 bits (96), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 29/112 (25%), Positives = 56/112 (50%), Gaps = 7/112 (6%)

Query: 119 EDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEA 178
           + ++P   +  E  +A+ F+N+IK  +  D   Y +FL+ +  Y+       EV + V+ 
Sbjct: 67  QQQKPSVPEDAEVCDAMVFLNRIKDEYSEDMVTYDNFLETMRDYKFGKIDADEVCKGVKI 126

Query: 179 LFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNS--ILRDRSSAMPTARQVH 228
           LF+D P L++ F  +LP     + + +   GR++  + R+     P A+  H
Sbjct: 127 LFKDKPYLIDIFNEYLP-----SHLKFYSDGRHTDNLQRNYDVRPPMAQHPH 173


>gi|297852872|ref|XP_002894317.1| hypothetical protein ARALYDRAFT_892116 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297340159|gb|EFH70576.1| hypothetical protein ARALYDRAFT_892116 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 179

 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 54/178 (30%), Positives = 81/178 (45%), Gaps = 58/178 (32%)

Query: 509 TPSYRLLPKNYLIPSASQRTELGA-EVLNDHWV-SVTSGSEDYSFKHMRKNQYEESLFRC 566
           T SY+L+ +    P  S     GA  VLN   V +++SGS      + R N YE+ L  C
Sbjct: 54  TRSYKLIER----PLVSYEDHTGAASVLNSECVLAISSGS-----LYKRSNAYEDKLNEC 104

Query: 567 EDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFTALNLRCIERLYGDH 626
           ED RF                                               IE LYG  
Sbjct: 105 EDQRF-----------------------------------------------IEMLYGAE 117

Query: 627 GLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSF 684
           G +V++ ++ + SLAL  ++ R+KQ+QEEW  C  +F + W E+Y++N+ KSLDH+++
Sbjct: 118 GGEVIENIKSDPSLALACVMKRVKQRQEEWRTCLYEFKEPWGEVYARNFQKSLDHKTY 175


>gi|397602098|gb|EJK58077.1| hypothetical protein THAOC_21823, partial [Thalassiosira oceanica]
          Length = 72

 Score = 80.1 bits (196), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 39/70 (55%), Positives = 50/70 (71%)

Query: 41  QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDL 100
           ++L   DAL YL  VK  F D+   Y++FL++MK FK+Q IDT GVI RV  LF G+R L
Sbjct: 3   RELRVEDALMYLDQVKMEFGDRPHIYNEFLDIMKTFKSQAIDTPGVIRRVASLFHGNRRL 62

Query: 101 ILGFNTFLPK 110
           +LGFNTFLP+
Sbjct: 63  VLGFNTFLPE 72



 Score = 43.1 bits (100), Expect = 0.89,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 38/70 (54%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDL 186
           + +  E+A+ +++++K  F    H+Y  FLDI+  ++ +      V + V +LF  +  L
Sbjct: 3   RELRVEDALMYLDQVKMEFGDRPHIYNEFLDIMKTFKSQAIDTPGVIRRVASLFHGNRRL 62

Query: 187 LEEFTHFLPD 196
           +  F  FLP+
Sbjct: 63  VLGFNTFLPE 72


>gi|357455593|ref|XP_003598077.1| Histone deacetylase complex SIN3 component [Medicago truncatula]
 gi|355487125|gb|AES68328.1| Histone deacetylase complex SIN3 component [Medicago truncatula]
          Length = 469

 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 43/79 (54%), Positives = 51/79 (64%), Gaps = 1/79 (1%)

Query: 41  QKLTTNDALAYLKAVKDIF-QDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRD 99
           + L+  DAL    A+K  F  +K  KY+ FL++MKDFKA+ ID   V  RV EL  GH D
Sbjct: 2   KNLSLGDALGLFSALKRKFGYEKGGKYESFLQIMKDFKAETIDARVVKLRVYELLDGHED 61

Query: 100 LILGFNTFLPKGYEITLPL 118
           LIL FNTFLP  YEI LPL
Sbjct: 62  LILRFNTFLPAKYEIKLPL 80


>gi|224055859|ref|XP_002298689.1| predicted protein [Populus trichocarpa]
 gi|222845947|gb|EEE83494.1| predicted protein [Populus trichocarpa]
          Length = 191

 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 58/172 (33%), Positives = 89/172 (51%), Gaps = 15/172 (8%)

Query: 50  AYLKAVKDIFQDKREKYDDFLEVMKDFKAQRI--DTAGVI-----ARVKELFKGHRDLIL 102
            Y++A+K  F D+ EK+  F +VM D  AQR+  D  G I     AR+K + +GH DLI 
Sbjct: 18  TYIRALKARFHDQPEKFHSFYKVMIDIMAQRVQPDGPGGIPDDAPARLKAILEGHNDLIY 77

Query: 103 GFNTFLPKGYEITL--PLEDEQPPPKKPV--EFEEAINFVNKIKTRFQGDDHVYKSFLDI 158
           G N FLP  + ++L   +E E    +  V    E+A + + + K R    + VY++F + 
Sbjct: 78  GLNFFLPPSHRVSLDDGMEIEPVTAEGAVLSGLEDAKDLIKEAKMR---GEKVYEAFKET 134

Query: 159 LNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGR 210
           L +   + +S  +V  +V  LF D PDLLE F  F+P         Y P+ +
Sbjct: 135 L-LSTSQKRSFDDVCSDVVELFIDDPDLLERFRQFMPVYEPTPLASYAPNSQ 185


>gi|255554082|ref|XP_002518081.1| conserved hypothetical protein [Ricinus communis]
 gi|223542677|gb|EEF44214.1| conserved hypothetical protein [Ricinus communis]
          Length = 379

 Score = 79.7 bits (195), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 61/167 (36%), Positives = 91/167 (54%), Gaps = 12/167 (7%)

Query: 506 ERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSE-DYSFKH-MRKNQYEESL 563
           E C+PSYRL  K+      +Q  EL +E+LND WV V+S SE D   K    + Q EE  
Sbjct: 222 EYCSPSYRLAGKDDHHSKRAQ-NEL-SELLNDRWVCVSSQSENDKPHKEETHRIQKEEIE 279

Query: 564 FRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFTALNLRCIERLY 623
            + E+DR+E DM L  +    +   +L E      +  DG  ++  HF     RCI++LY
Sbjct: 280 LKREEDRYEADMQLSWLRSAAEYATKLSEGAKEEEL--DGLSKI--HFK----RCIQQLY 331

Query: 624 GDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEI 670
            D   DV+++ +KN S  L V+L RL QK +E    R++  ++WA++
Sbjct: 332 ADDCDDVLEMFQKNQSPTLAVVLPRLNQKIKELTVFRAELQEIWAQM 378


>gi|357444331|ref|XP_003592443.1| Paired amphipathic helix protein Sin3 [Medicago truncatula]
 gi|355481491|gb|AES62694.1| Paired amphipathic helix protein Sin3 [Medicago truncatula]
          Length = 176

 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/149 (33%), Positives = 77/149 (51%), Gaps = 15/149 (10%)

Query: 49  LAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFL 108
           + ++K VK + QDK+EK+DDF++++ DF+A+RID   +   + EL K H+DLI  FN FL
Sbjct: 1   MEFIKDVKVVLQDKKEKFDDFMKLLHDFRAKRIDRRVIKEGIMELLKEHQDLISRFNIFL 60

Query: 109 PKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKS 168
           P G EI             P+ F    +F   +K  F      Y  FL ++  Y  +   
Sbjct: 61  PPGDEI-------------PLLF--PTSFATAVKVAFPYKMEKYDEFLKLVVDYNAKRID 105

Query: 169 ITEVYQEVEALFQDHPDLLEEFTHFLPDS 197
           +    + +  LF+DH DLL     +LP+ 
Sbjct: 106 MRVFKEGLMELFKDHKDLLLGLNTWLPEG 134



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 37/74 (50%), Positives = 54/74 (72%), Gaps = 1/74 (1%)

Query: 50  AYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLP 109
           ++  AVK  F  K EKYD+FL+++ D+ A+RID       + ELFK H+DL+LG NT+LP
Sbjct: 73  SFATAVKVAFPYKMEKYDEFLKLVVDYNAKRIDMRVFKEGLMELFKDHKDLLLGLNTWLP 132

Query: 110 KGYEITLPLE-DEQ 122
           +G++I+LPL+ DEQ
Sbjct: 133 EGHKISLPLDGDEQ 146


>gi|15242197|ref|NP_197008.1| paired amphipathic helix repeat-containing protein [Arabidopsis
           thaliana]
 gi|9755671|emb|CAC01823.1| putative protein [Arabidopsis thaliana]
 gi|332004726|gb|AED92109.1| paired amphipathic helix repeat-containing protein [Arabidopsis
           thaliana]
          Length = 87

 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 37/67 (55%), Positives = 46/67 (68%)

Query: 50  AYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLP 109
           AY   VKD F D+ EKYD F  ++ D KA+RI      A++KELFK H +LI+GFNTFLP
Sbjct: 6   AYFMEVKDTFHDQIEKYDMFKNILLDLKARRIGRHTAFAQLKELFKEHNELIIGFNTFLP 65

Query: 110 KGYEITL 116
            GY+I L
Sbjct: 66  TGYKIAL 72


>gi|255077800|ref|XP_002502481.1| predicted protein [Micromonas sp. RCC299]
 gi|226517746|gb|ACO63739.1| predicted protein [Micromonas sp. RCC299]
          Length = 592

 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 39/65 (60%), Positives = 45/65 (69%), Gaps = 1/65 (1%)

Query: 46  NDALAYLKAVKDIFQ-DKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGF 104
            DAL Y++AVK  FQ  K E Y+ FLEVM+DFK  R DT  V+ RVKEL  GH DL+ GF
Sbjct: 17  QDALTYVRAVKSRFQATKPEVYEAFLEVMRDFKNARSDTPEVVRRVKELLGGHPDLLDGF 76

Query: 105 NTFLP 109
           N FLP
Sbjct: 77  NCFLP 81



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 1/80 (1%)

Query: 124 PPKKPVEFEEAINFVNKIKTRFQGD-DHVYKSFLDILNMYRKENKSITEVYQEVEALFQD 182
           PP      ++A+ +V  +K+RFQ     VY++FL+++  ++       EV + V+ L   
Sbjct: 9   PPVGAEPPQDALTYVRAVKSRFQATKPEVYEAFLEVMRDFKNARSDTPEVVRRVKELLGG 68

Query: 183 HPDLLEEFTHFLPDSSGAAS 202
           HPDLL+ F  FLP+    +S
Sbjct: 69  HPDLLDGFNCFLPEVRAPSS 88


>gi|12084693|pdb|1G1E|B Chain B, Nmr Structure Of The Human Mad1 Transrepression Domain Sid
           In Complex With Mammalian Sin3a Pah2 Domain
 gi|50513450|pdb|1S5Q|B Chain B, Solution Structure Of Mad1 Sid-Msin3a Pah2 Complex
 gi|50513452|pdb|1S5R|B Chain B, Solution Structure Of Hbp1 Sid-Msin3a Pah2 Complex
          Length = 89

 Score = 77.8 bits (190), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 40/84 (47%), Positives = 53/84 (63%), Gaps = 13/84 (15%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI-------------TEVY 173
           +PVEF  AIN+VNKIK RFQG   +YK+FL+IL+ Y+KE ++               EVY
Sbjct: 6   QPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVY 65

Query: 174 QEVEALFQDHPDLLEEFTHFLPDS 197
            +V  LF++  DLL EF  FLPD+
Sbjct: 66  AQVARLFKNQEDLLSEFGQFLPDA 89


>gi|323450207|gb|EGB06090.1| hypothetical protein AURANDRAFT_9324, partial [Aureococcus
           anophagefferens]
          Length = 69

 Score = 77.8 bits (190), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 36/69 (52%), Positives = 49/69 (71%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           VEF+ AI +V  IK RF+     YK+FL++L+ Y++E K I EV + V  LF+DH DLL 
Sbjct: 1   VEFDNAIAYVTAIKKRFEHQPETYKAFLEVLHTYQREQKGIQEVLRRVAELFRDHADLLR 60

Query: 189 EFTHFLPDS 197
           EFT+FLPD+
Sbjct: 61  EFTYFLPDA 69



 Score = 51.6 bits (122), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/64 (39%), Positives = 40/64 (62%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFN 105
           ++A+AY+ A+K  F+ + E Y  FLEV+  ++ ++     V+ RV ELF+ H DL+  F 
Sbjct: 4   DNAIAYVTAIKKRFEHQPETYKAFLEVLHTYQREQKGIQEVLRRVAELFRDHADLLREFT 63

Query: 106 TFLP 109
            FLP
Sbjct: 64  YFLP 67


>gi|440634861|gb|ELR04780.1| hypothetical protein GMDG_07007 [Geomyces destructans 20631-21]
          Length = 641

 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 38/77 (49%), Positives = 49/77 (63%), Gaps = 3/77 (3%)

Query: 39  GAQKLT---TNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFK 95
           GA  LT    ++A +YL  VK  F DK + Y  FL ++KDFK+Q ID   VI R+ +LF 
Sbjct: 222 GALALTQKQLDEAYSYLDQVKAQFVDKPDIYSTFLHILKDFKSQVIDIPSVINRISDLFA 281

Query: 96  GHRDLILGFNTFLPKGY 112
           GH  LI GF+TF P+GY
Sbjct: 282 GHPSLIRGFSTFWPQGY 298



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 50/81 (61%)

Query: 33  GGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKE 92
           G    G  +++ +++A++Y++ ++  F D+ + Y  FL  +KD+++Q I   GV+ R+ E
Sbjct: 49  GAPALGQERRVISSEAVSYIRQIQLEFVDQPDIYRTFLHTLKDYESQVIGFPGVVTRISE 108

Query: 93  LFKGHRDLILGFNTFLPKGYE 113
           L  GH +LI G N FLP  Y+
Sbjct: 109 LLAGHPNLIQGLNIFLPPRYQ 129



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 21/73 (28%), Positives = 40/73 (54%)

Query: 130 EFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEE 189
           + +EA ++++++K +F     +Y +FL IL  ++ +   I  V   +  LF  HP L+  
Sbjct: 230 QLDEAYSYLDQVKAQFVDKPDIYSTFLHILKDFKSQVIDIPSVINRISDLFAGHPSLIRG 289

Query: 190 FTHFLPDSSGAAS 202
           F+ F P   GA++
Sbjct: 290 FSTFWPQGYGASN 302


>gi|294889288|ref|XP_002772745.1| hypothetical protein Pmar_PMAR014962 [Perkinsus marinus ATCC 50983]
 gi|239877278|gb|EER04561.1| hypothetical protein Pmar_PMAR014962 [Perkinsus marinus ATCC 50983]
          Length = 740

 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 50/184 (27%), Positives = 97/184 (52%), Gaps = 15/184 (8%)

Query: 534 VLNDHWVSVTSGSEDYS-FKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLE 592
           ++N+ W+ V+ G+E+   FK+ R+N  EE+LF  ED ++     ++ V++T +R+EEL +
Sbjct: 185 IINNTWMGVSLGTEEAQDFKYFRRNHSEEALFNNEDHKYATTFTVKCVSLTVRRLEELQK 244

Query: 593 KINNNTIKTDG-----PIRVEDHFTALNLRCIERLYGDH--GLDVMDVLRKNASLALPVI 645
           K+       +G      +++    T+ +L  I   Y     G  + D L  +    LP++
Sbjct: 245 KLEE---MAEGEREAYELKMPHDITSQHLEQIINSYTSTAIGQKMADELLLHPMKTLPLL 301

Query: 646 LTRLKQKQEEWARCRSDF----NKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSA 701
           +TRLK+ +       S      +K W ++  ++Y   LDHRS+YF+   SK+  ++A   
Sbjct: 302 VTRLKETEASLTSPTSGLVAAASKAWLKVDKRSYLPGLDHRSYYFRGHCSKNSTSRAFLT 361

Query: 702 EIKE 705
           ++++
Sbjct: 362 DLRQ 365


>gi|332639399|pdb|2L9S|B Chain B, Solution Structure Of Pf1 Sid1-Msin3a Pah2 Complex
          Length = 94

 Score = 77.0 bits (188), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 40/85 (47%), Positives = 54/85 (63%), Gaps = 13/85 (15%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI-------------TEVY 173
           +PVEF  AIN+VNKIK RFQG   +YK+FL+IL+ Y+KE ++               EVY
Sbjct: 9   QPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVY 68

Query: 174 QEVEALFQDHPDLLEEFTHFLPDSS 198
            +V  LF++  DLL EF  FLPD++
Sbjct: 69  AQVARLFKNQEDLLSEFGQFLPDAN 93


>gi|440635929|gb|ELR05848.1| hypothetical protein GMDG_07621, partial [Geomyces destructans
           20631-21]
          Length = 602

 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 42/96 (43%), Positives = 56/96 (58%), Gaps = 8/96 (8%)

Query: 27  GQTQVVGGGG-----GGGAQKLT---TNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKA 78
           G +Q  GG         GA  LT    ++A +YL  VK    DK + Y  FL ++KDFK+
Sbjct: 214 GPSQPPGGVAHPAYLAQGALALTQKQLDEARSYLDQVKAQLVDKPDIYSTFLHILKDFKS 273

Query: 79  QRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEI 114
           Q ID   VI R+ +LF GH  LI GF+TFLP+G++I
Sbjct: 274 QVIDIPNVINRISDLFAGHPSLIRGFSTFLPEGHQI 309



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 48/82 (58%)

Query: 33  GGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKE 92
           G    G  ++ T+++A++Y+K V     D+ + Y  FL ++KD+++Q I    +I+RV E
Sbjct: 49  GAPALGQERRDTSSEAVSYVKQVILESVDQPDIYRTFLHILKDYESQVIGLPDLISRVSE 108

Query: 93  LFKGHRDLILGFNTFLPKGYEI 114
           LF GH +LI G   FLP    I
Sbjct: 109 LFAGHPNLIQGLIPFLPPSCRI 130



 Score = 45.8 bits (107), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 19/67 (28%), Positives = 37/67 (55%)

Query: 130 EFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEE 189
           + +EA ++++++K +      +Y +FL IL  ++ +   I  V   +  LF  HP L+  
Sbjct: 239 QLDEARSYLDQVKAQLVDKPDIYSTFLHILKDFKSQVIDIPNVINRISDLFAGHPSLIRG 298

Query: 190 FTHFLPD 196
           F+ FLP+
Sbjct: 299 FSTFLPE 305



 Score = 45.1 bits (105), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 4/75 (5%)

Query: 133 EAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTH 192
           EA+++V ++         +Y++FL IL  Y  +   + ++   V  LF  HP+L++    
Sbjct: 63  EAVSYVKQVILESVDQPDIYRTFLHILKDYESQVIGLPDLISRVSELFAGHPNLIQGLIP 122

Query: 193 FLPDS----SGAASI 203
           FLP S    SGA +I
Sbjct: 123 FLPPSCRIESGANAI 137


>gi|293332431|ref|NP_001169766.1| uncharacterized protein LOC100383650 [Zea mays]
 gi|224031553|gb|ACN34852.1| unknown [Zea mays]
          Length = 380

 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 37/77 (48%), Positives = 52/77 (67%), Gaps = 1/77 (1%)

Query: 41  QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGH-RD 99
           +K+T  DA +YL+AVKD+F+    KY +F ++M D+K  RI    VI R+K LF GH  +
Sbjct: 301 KKITLIDAFSYLEAVKDVFKGNPSKYSEFFDLMIDYKRDRIKIKDVIIRLKTLFTGHDPN 360

Query: 100 LILGFNTFLPKGYEITL 116
           LIL F+ FLP+ + ITL
Sbjct: 361 LILDFSVFLPREWAITL 377



 Score = 43.5 bits (101), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 20/70 (28%), Positives = 40/70 (57%), Gaps = 1/70 (1%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDH-PD 185
           K +   +A +++  +K  F+G+   Y  F D++  Y+++   I +V   ++ LF  H P+
Sbjct: 301 KKITLIDAFSYLEAVKDVFKGNPSKYSEFFDLMIDYKRDRIKIKDVIIRLKTLFTGHDPN 360

Query: 186 LLEEFTHFLP 195
           L+ +F+ FLP
Sbjct: 361 LILDFSVFLP 370


>gi|396082381|gb|AFN83990.1| histone deacetylase complex protein Sin3 [Encephalitozoon romaleae
           SJ-2008]
          Length = 874

 Score = 76.3 bits (186), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 102/204 (50%), Gaps = 20/204 (9%)

Query: 511 SYRLLPKNYLIPSASQRTELGAEVLNDHWVSV-TSGSEDYSFKHMRKNQYEESLFRCEDD 569
           SYR+LP+      + ++  +  EVLN   +   T  SED ++  +++N +EE+LFR ED+
Sbjct: 420 SYRILPEEL---RSERQDPISREVLNFTCIGCPTFESEDSNYVFLKRNVHEEALFRIEDE 476

Query: 570 RFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVED--HFTALNLRCIERLYGDHG 627
           R E D+ +E +      +E+++      ++  D  I + D    + +    ++ +Y    
Sbjct: 477 RSEADLAIERIQYFINSLEQII------SLNKDSEISMRDIKMSSGIIKEILKSIYDKSA 530

Query: 628 LDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLD-----HR 682
            ++++ +     +A+P+++ RL    ++   C  +  K+W E+  +NYHK+LD     H+
Sbjct: 531 PEILEGILMKPHIAIPIVIKRLYMVNKKLRLCMREKRKIWREVMERNYHKALDVVGPSHK 590

Query: 683 S---FYFKQQDSKSLGAKALSAEI 703
           S     F  ++    G K L A I
Sbjct: 591 SSEKTIFTTKNIVETGEKGLKASI 614



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 71/319 (22%), Positives = 134/319 (42%), Gaps = 40/319 (12%)

Query: 123 PPPK---KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEAL 179
           PPP+   +  +  +A+ F+NKIK  +  D   Y +FL+ +  ++       EV + V  L
Sbjct: 89  PPPRISHEDADLSDAMMFLNKIKEEYINDMVTYDNFLETMRDFKFGKIDAEEVCRAVRVL 148

Query: 180 FQDHPDLLEEFTHFLP--------DSSGAASIHYVPSGRNSILRDRSS--AMPTARQVHV 229
           F+D   L+E F  +LP         SSG  S+  +P  + S +   S     P      +
Sbjct: 149 FRDKAHLIETFNDYLPAHLKFYGNSSSGIDSVPQLPGRQASSIGSPSQYRGSPYEPGGRM 208

Query: 230 DKKERAM--ASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGE---KERERRDDHRRERER 284
            K +  M    H +    V +       ++  S K   + G+    +++R +D  R + R
Sbjct: 209 PKPQLGMNPLPHINPHYGVHQSYATQPPIMHSSVKVTSQGGKYMAYDQKRSEDFERMKAR 268

Query: 285 DDRDFENDVNRDFS------------MQRFPHKRKSARKIEDSTAEPLHQGGEGDENFGM 332
             +DF   V + +S            +Q    K     K++      L +  +  E+F  
Sbjct: 269 QAQDFIQRVKKRYSHNPSVYRSFVEILQSHQVKNGLFEKMKAEVNSLLWESPDLCEDFER 328

Query: 333 HPVSSSYDDKNAMKSMFSQELSFCEKVKDKL--RDDYQEFLRCLHLYTKEIITRSELQSL 390
           + V        A + M   E +  +++K+ L  +D   +FL+C++ + ++ I   +L  L
Sbjct: 329 NFVP-------ARRYMIHDEKNILQRIKELLKSKDLLDDFLKCINYFNQKFINEKDLLDL 381

Query: 391 VGDLLGRYPDLMDGFNGFL 409
           +  LL +  +L+ G   F+
Sbjct: 382 ISPLL-KDEELIKGLKSFI 399



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 38/64 (59%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFN 105
           +DA+ +L  +K+ + +    YD+FLE M+DFK  +ID   V   V+ LF+    LI  FN
Sbjct: 101 SDAMMFLNKIKEEYINDMVTYDNFLETMRDFKFGKIDAEEVCRAVRVLFRDKAHLIETFN 160

Query: 106 TFLP 109
            +LP
Sbjct: 161 DYLP 164


>gi|297850908|ref|XP_002893335.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297339177|gb|EFH69594.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 89

 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 39/74 (52%), Positives = 48/74 (64%)

Query: 42  KLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLI 101
           K T  DA AY++AV+D F + R+KY+DFL +MKDFK ++I     I  V EL  G RDLI
Sbjct: 13  KPTKEDAYAYVRAVRDHFHNDRKKYEDFLAIMKDFKTRKISRNDCIRAVLELLNGDRDLI 72

Query: 102 LGFNTFLPKGYEIT 115
            GFN FLP   EI 
Sbjct: 73  SGFNAFLPFWMEIM 86


>gi|414588419|tpg|DAA38990.1| TPA: hypothetical protein ZEAMMB73_835530 [Zea mays]
          Length = 1029

 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 37/77 (48%), Positives = 52/77 (67%), Gaps = 1/77 (1%)

Query: 41   QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGH-RD 99
            +K+T  DA +YL+AVKD+F+    KY +F ++M D+K  RI    VI R+K LF GH  +
Sbjct: 950  KKITLIDAFSYLEAVKDVFKGNPSKYSEFFDLMIDYKRDRIKIKDVIIRLKTLFTGHDPN 1009

Query: 100  LILGFNTFLPKGYEITL 116
            LIL F+ FLP+ + ITL
Sbjct: 1010 LILDFSVFLPREWAITL 1026



 Score = 43.9 bits (102), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 20/70 (28%), Positives = 40/70 (57%), Gaps = 1/70 (1%)

Query: 127  KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDH-PD 185
            K +   +A +++  +K  F+G+   Y  F D++  Y+++   I +V   ++ LF  H P+
Sbjct: 950  KKITLIDAFSYLEAVKDVFKGNPSKYSEFFDLMIDYKRDRIKIKDVIIRLKTLFTGHDPN 1009

Query: 186  LLEEFTHFLP 195
            L+ +F+ FLP
Sbjct: 1010 LILDFSVFLP 1019


>gi|294890312|ref|XP_002773128.1| hypothetical protein Pmar_PMAR027666 [Perkinsus marinus ATCC 50983]
 gi|239878077|gb|EER04944.1| hypothetical protein Pmar_PMAR027666 [Perkinsus marinus ATCC 50983]
          Length = 383

 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 96/181 (53%), Gaps = 9/181 (4%)

Query: 534 VLNDHWVSVTSGSEDYS-FKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLE 592
           ++N+ W+ V+ G+E+   FK+ R+N  EE+LF  ED ++     ++ V++T +R+EEL +
Sbjct: 185 IINNTWMGVSLGTEEAQDFKYFRRNHSEEALFNNEDHKYATTFTVKCVSLTVRRLEELQK 244

Query: 593 KINNNT--IKTDGPIRVEDHFTALNLRCIERLYGDH--GLDVMDVLRKNASLALPVILTR 648
           K+       +    +++    T+ +L  I   Y     G  + D L  +    LP+++TR
Sbjct: 245 KLEEMAEGEREAYELKMPHDITSQHLEQIINSYTSTAIGQKMADELLLHPMKTLPLLVTR 304

Query: 649 LKQKQEEWARCRSDF----NKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIK 704
           LK+ +       S      +K W ++  ++Y   LDHRS+YF+   SK+  ++A   +++
Sbjct: 305 LKETEASLTSPTSGLVAAASKAWLKVDKRSYLPGLDHRSYYFRGHCSKNSTSRAFLTDLR 364

Query: 705 E 705
           +
Sbjct: 365 Q 365


>gi|303391277|ref|XP_003073868.1| histone deacetylase complex protein Sin3 [Encephalitozoon
           intestinalis ATCC 50506]
 gi|303303017|gb|ADM12508.1| histone deacetylase complex protein Sin3 [Encephalitozoon
           intestinalis ATCC 50506]
          Length = 876

 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 92/173 (53%), Gaps = 12/173 (6%)

Query: 511 SYRLLPKNYLIPSASQRTELGAEVLNDHWVSV-TSGSEDYSFKHMRKNQYEESLFRCEDD 569
           SYR+LP+      + ++  +  EVLN   +   T  SED ++  +++N +EE+LFR ED+
Sbjct: 411 SYRILPEKI---KSERQDPIAREVLNFTCIGCPTFESEDSNYVFLKRNVHEEALFRIEDE 467

Query: 570 RFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFTALNL--RCIERLYGDHG 627
           R E D+ +E        +E++   I++N    D  I + D   +  +    ++ +YG   
Sbjct: 468 RSEADLAVERTQYFINALEQI---ISSNK---DSEISMRDIKMSPGIIKEILKSIYGKSA 521

Query: 628 LDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLD 680
            ++++ +     +A+P+++ RL    ++   C  +  K+W E+  +NYHK+LD
Sbjct: 522 QEILEGILMKPHIAIPIVIKRLYMVNKKLRLCMKEKKKIWREVIERNYHKALD 574



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 85/355 (23%), Positives = 144/355 (40%), Gaps = 46/355 (12%)

Query: 124 PPKKPVE---FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALF 180
           PP+   E     +A+ F+NKIK  +  D   Y +FL+ +  ++       EV + V  LF
Sbjct: 83  PPRTSHEDADLSDAMMFLNKIKEEYANDMVTYDNFLETMRDFKFGKIDAEEVCRAVRVLF 142

Query: 181 QDHPDLLEEFTHFLP---DSSGAASIHYV--PS-------GRNSILRD---RSSAMPTAR 225
           +D P L+E F  +LP      G  S+  V  PS       G +S  R     SS      
Sbjct: 143 RDKPHLIEIFNDYLPVHLKFYGNPSVGTVARPSDRQMQGIGSSSQYRGGLYGSSGRMGHP 202

Query: 226 QVHVDKKERAMASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERRDDHRRERERD 285
           Q  ++        H        +P   H    +K    + +    ++ R ++  R + R 
Sbjct: 203 QPGINGPSYISPHHGIHQSYGSQPLVMHSS--MKMSGQEGKYAPYDQRRTEEFERMKARQ 260

Query: 286 DRDFENDVNRDFS------------MQRFPHKRKSARKIEDSTAEPLHQGGEGDENFGMH 333
            +DF   V + +S            +Q    K     K++      L +  +  E+F  +
Sbjct: 261 AQDFIQKVKKRYSHNPSIYRSFVEILQSHQVKNGLFEKMKAEVNSLLWESPDLCEDFERN 320

Query: 334 PVSSS----YDDKNAMKSMFSQELSFCEKVKDKLRDDYQEFLRCLHLYTKEIITRSELQS 389
            V S     YD+KN +  +  +EL    K K+ L D    FL+C++ + ++ I   +L  
Sbjct: 321 FVPSRRHMLYDEKNILHRI--KELL---KSKNLLDD----FLKCINYFNQKFINEKDLLE 371

Query: 390 LVGDLLGRYPDLMDGFNGFLARCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRD 444
           LV  LL +  +L+ GF  F+   E   E    +   K   +   +P+ +K E +D
Sbjct: 372 LVAPLL-KNEELIRGFKAFINYKEPLRETPRSLEKYKKEGSYRILPEKIKSERQD 425



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 38/64 (59%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFN 105
           +DA+ +L  +K+ + +    YD+FLE M+DFK  +ID   V   V+ LF+    LI  FN
Sbjct: 94  SDAMMFLNKIKEEYANDMVTYDNFLETMRDFKFGKIDAEEVCRAVRVLFRDKPHLIEIFN 153

Query: 106 TFLP 109
            +LP
Sbjct: 154 DYLP 157


>gi|357509351|ref|XP_003624964.1| Paired amphipathic helix protein Sin3 [Medicago truncatula]
 gi|87241165|gb|ABD33023.1| Paired amphipathic helix [Medicago truncatula]
 gi|355499979|gb|AES81182.1| Paired amphipathic helix protein Sin3 [Medicago truncatula]
          Length = 122

 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/72 (52%), Positives = 48/72 (66%)

Query: 44  TTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILG 103
           +  DALA++K V+  F+DK +KYD+FL VM DFK  RID  G  AR+ ELFK HR LI+ 
Sbjct: 12  SMKDALAFVKGVEVEFEDKGDKYDEFLNVMNDFKTLRIDAEGAKARLDELFKEHRHLIMR 71

Query: 104 FNTFLPKGYEIT 115
           FN+   KG   T
Sbjct: 72  FNSLTLKGSHFT 83


>gi|19074819|ref|NP_586325.1| TRANSCRIPTIONAL REGULATOR-LIKE PROTEIN [Encephalitozoon cuniculi
           GB-M1]
          Length = 891

 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 91/173 (52%), Gaps = 12/173 (6%)

Query: 511 SYRLLPKNYLIPSASQRTELGAEVLNDHWVSV-TSGSEDYSFKHMRKNQYEESLFRCEDD 569
           SYR+LP+        ++  +  EVLN   V   T  SED ++  +++N +EE+LFR ED+
Sbjct: 426 SYRILPEEI---KEGKQDPIAKEVLNFTCVGCPTFESEDSNYVFLKRNVHEEALFRIEDE 482

Query: 570 RFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFTALNL--RCIERLYGDHG 627
           R E D+ +E +      +E++++      +  D  I ++D   +  +    ++ +Y    
Sbjct: 483 RSEADLAIERIQHLINALEQIID------LNKDSEISMKDIKMSPGIIKEILKSIYDKSA 536

Query: 628 LDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLD 680
            ++++ +     +A+P+++ RL    ++   C  +  K+W E+  +NYHK+LD
Sbjct: 537 PEILEGILMKPHIAIPIVIKRLYMVNKKVRLCMRERRKIWREVMERNYHKALD 589



 Score = 69.7 bits (169), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 79/319 (24%), Positives = 138/319 (43%), Gaps = 42/319 (13%)

Query: 123 PPPKKPVE---FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEAL 179
           PPP+ P E     +A+ F+NKIK  +  D   Y +FL+ +  ++       EV + V  L
Sbjct: 97  PPPRIPHEDADLSDAMMFLNKIKEEYMNDMVTYDNFLETMRDFKFGKIDAEEVCRAVRVL 156

Query: 180 FQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDR-SSAMPTARQ------VHVDKK 232
           F+D P L+E F  +LP  S       +P G  S L DR   A+ ++ Q      VH  + 
Sbjct: 157 FRDKPHLIETFNDYLP--SHLKFYGSLPQGSGSRLHDRPPQAVGSSPQYRGGPCVHGGRT 214

Query: 233 ERAMA-----SHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEK---ERERRDDHRRERER 284
               A     SH +    + +   +   ++  S K   + G++   ++ R ++  R + R
Sbjct: 215 SHPQAEVSGPSHMNPQRGIHQGYINQPLIMHSSVKVSGQNGKRMPYDQRRSEEFERMKAR 274

Query: 285 DDRDFENDVNRDFS------------MQRFPHKRKSARKIEDSTAEPLHQGGEGDENFGM 332
             +DF   V + +S            +Q    K     K++      L +  +  E+F  
Sbjct: 275 QAQDFIQRVKKRYSHNPSVYRSFVELLQSHQVKSGLFEKMKAEVNSLLWESPDLCEDFER 334

Query: 333 HPVSSSYDDKNAMKSMFSQELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSL 390
           + V          K M S E S  +++K+ L+      +FL+C++ + ++ I   +L  L
Sbjct: 335 NFVP-------IRKHMPSDEKSILQRIKELLKSKNLLDDFLKCINYFNQKFINEKDLLEL 387

Query: 391 VGDLLGRYPDLMDGFNGFL 409
           V  LL R  +L+ GF  F+
Sbjct: 388 VAPLL-RSEELIRGFKAFI 405



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 38/64 (59%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFN 105
           +DA+ +L  +K+ + +    YD+FLE M+DFK  +ID   V   V+ LF+    LI  FN
Sbjct: 109 SDAMMFLNKIKEEYMNDMVTYDNFLETMRDFKFGKIDAEEVCRAVRVLFRDKPHLIETFN 168

Query: 106 TFLP 109
            +LP
Sbjct: 169 DYLP 172


>gi|392512903|emb|CAD25929.2| TRANSCRIPTIONAL REGULATOR-LIKE PROTEIN [Encephalitozoon cuniculi
           GB-M1]
          Length = 876

 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 91/173 (52%), Gaps = 12/173 (6%)

Query: 511 SYRLLPKNYLIPSASQRTELGAEVLNDHWVSV-TSGSEDYSFKHMRKNQYEESLFRCEDD 569
           SYR+LP+        ++  +  EVLN   V   T  SED ++  +++N +EE+LFR ED+
Sbjct: 411 SYRILPEEI---KEGKQDPIAKEVLNFTCVGCPTFESEDSNYVFLKRNVHEEALFRIEDE 467

Query: 570 RFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFTALNL--RCIERLYGDHG 627
           R E D+ +E +      +E++++      +  D  I ++D   +  +    ++ +Y    
Sbjct: 468 RSEADLAIERIQHLINALEQIID------LNKDSEISMKDIKMSPGIIKEILKSIYDKSA 521

Query: 628 LDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLD 680
            ++++ +     +A+P+++ RL    ++   C  +  K+W E+  +NYHK+LD
Sbjct: 522 PEILEGILMKPHIAIPIVIKRLYMVNKKVRLCMRERRKIWREVMERNYHKALD 574



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 79/319 (24%), Positives = 138/319 (43%), Gaps = 42/319 (13%)

Query: 123 PPPKKPVE---FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEAL 179
           PPP+ P E     +A+ F+NKIK  +  D   Y +FL+ +  ++       EV + V  L
Sbjct: 82  PPPRIPHEDADLSDAMMFLNKIKEEYMNDMVTYDNFLETMRDFKFGKIDAEEVCRAVRVL 141

Query: 180 FQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDR-SSAMPTARQ------VHVDKK 232
           F+D P L+E F  +LP  S       +P G  S L DR   A+ ++ Q      VH  + 
Sbjct: 142 FRDKPHLIETFNDYLP--SHLKFYGSLPQGSGSRLHDRPPQAVGSSPQYRGGPCVHGGRT 199

Query: 233 ERAMA-----SHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEK---ERERRDDHRRERER 284
               A     SH +    + +   +   ++  S K   + G++   ++ R ++  R + R
Sbjct: 200 SHPQAEVSGPSHMNPQRGIHQGYINQPLIMHSSVKVSGQNGKRMPYDQRRSEEFERMKAR 259

Query: 285 DDRDFENDVNRDFS------------MQRFPHKRKSARKIEDSTAEPLHQGGEGDENFGM 332
             +DF   V + +S            +Q    K     K++      L +  +  E+F  
Sbjct: 260 QAQDFIQRVKKRYSHNPSVYRSFVELLQSHQVKSGLFEKMKAEVNSLLWESPDLCEDFER 319

Query: 333 HPVSSSYDDKNAMKSMFSQELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSL 390
           + V          K M S E S  +++K+ L+      +FL+C++ + ++ I   +L  L
Sbjct: 320 NFVP-------IRKHMPSDEKSILQRIKELLKSKNLLDDFLKCINYFNQKFINEKDLLEL 372

Query: 391 VGDLLGRYPDLMDGFNGFL 409
           V  LL R  +L+ GF  F+
Sbjct: 373 VAPLL-RSEELIRGFKAFI 390



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 38/64 (59%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFN 105
           +DA+ +L  +K+ + +    YD+FLE M+DFK  +ID   V   V+ LF+    LI  FN
Sbjct: 94  SDAMMFLNKIKEEYMNDMVTYDNFLETMRDFKFGKIDAEEVCRAVRVLFRDKPHLIETFN 153

Query: 106 TFLP 109
            +LP
Sbjct: 154 DYLP 157


>gi|449330348|gb|AGE96603.1| transcriptional regulator-like protein [Encephalitozoon cuniculi]
          Length = 891

 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 91/173 (52%), Gaps = 12/173 (6%)

Query: 511 SYRLLPKNYLIPSASQRTELGAEVLNDHWVSV-TSGSEDYSFKHMRKNQYEESLFRCEDD 569
           SYR+LP+        ++  +  EVLN   V   T  SED ++  +++N +EE+LFR ED+
Sbjct: 426 SYRILPEEI---KEGKQDPIAKEVLNFTCVGCPTFESEDSNYVFLKRNVHEEALFRIEDE 482

Query: 570 RFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFTALNL--RCIERLYGDHG 627
           R E D+ +E +      +E++++      +  D  I ++D   +  +    ++ +Y    
Sbjct: 483 RSEADLAIERIQHLINALEQIID------LNKDSEISMKDIKMSPGIIKEILKSIYDKSA 536

Query: 628 LDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLD 680
            ++++ +     +A+P+++ RL    ++   C  +  K+W E+  +NYHK+LD
Sbjct: 537 PEILEGILMKPHIAIPIVIKRLYMVNKKVRLCMRERRKIWREVMERNYHKALD 589



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 77/319 (24%), Positives = 136/319 (42%), Gaps = 42/319 (13%)

Query: 123 PPPKKPVE---FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEAL 179
           PPP+ P E     +A+ F+NKIK  +  D   Y +FL+ +  ++       EV + V  L
Sbjct: 97  PPPRIPHEDADLSDAMMFLNKIKEEYMNDMVTYDNFLETMRDFKFGKIDAEEVCRAVRVL 156

Query: 180 FQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRS----SAMPTAR--------QV 227
           F+D P L+E F  +LP  S       +P G  S L DR      + P  R        + 
Sbjct: 157 FRDKPHLIETFNDYLP--SHLKFYGSLPQGSGSRLHDRPPQAVGSSPQYRGGLCGHGGRT 214

Query: 228 HVDKKERAMASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEK---ERERRDDHRRERER 284
              + E +  SH +    + +   +   ++  S K   + G++   ++ R ++  R + R
Sbjct: 215 SHPQAEVSGPSHMNPQRGIHQGYINQPLIMHSSVKVSGQNGKRMPYDQRRSEEFERMKAR 274

Query: 285 DDRDFENDVNRDFS------------MQRFPHKRKSARKIEDSTAEPLHQGGEGDENFGM 332
             +DF   V + +S            +Q    K     K++      L +  +  E+F  
Sbjct: 275 QAQDFIQRVKKRYSHNPSVYRSFVELLQSHQVKSGLFEKMKAEVNSLLWESPDLCEDFER 334

Query: 333 HPVSSSYDDKNAMKSMFSQELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSL 390
           + V          K M S E S  +++K+ L+      +FL+C++ + ++ I   +L  L
Sbjct: 335 NFVP-------IRKHMPSDEKSILQRIKELLKSKNLLDDFLKCINYFNQKFINEKDLLEL 387

Query: 391 VGDLLGRYPDLMDGFNGFL 409
           V  LL R  +L+ GF  F+
Sbjct: 388 VTPLL-RSEELIRGFKAFI 405



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 38/64 (59%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFN 105
           +DA+ +L  +K+ + +    YD+FLE M+DFK  +ID   V   V+ LF+    LI  FN
Sbjct: 109 SDAMMFLNKIKEEYMNDMVTYDNFLETMRDFKFGKIDAEEVCRAVRVLFRDKPHLIETFN 168

Query: 106 TFLP 109
            +LP
Sbjct: 169 DYLP 172


>gi|401827944|ref|XP_003888264.1| putative transcription regulator protein [Encephalitozoon hellem
           ATCC 50504]
 gi|392999536|gb|AFM99283.1| putative transcription regulator protein [Encephalitozoon hellem
           ATCC 50504]
          Length = 874

 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 91/173 (52%), Gaps = 12/173 (6%)

Query: 511 SYRLLPKNYLIPSASQRTELGAEVLNDHWVSV-TSGSEDYSFKHMRKNQYEESLFRCEDD 569
           SYR+LP+      + ++  +  EVLN   +   T  SED ++  +++N +EE+LFR ED+
Sbjct: 420 SYRILPEEL---RSERQDPISREVLNFTCIGCPTFESEDSNYVFLKRNVHEEALFRIEDE 476

Query: 570 RFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFTALNL--RCIERLYGDHG 627
           R E D+ +E +      +E+++      ++  D  I + D   +  +    ++ +Y    
Sbjct: 477 RSEADLAIERIQYFINSLEQII------SLNKDSEISMRDIKMSPGIIKEILKSIYDKSA 530

Query: 628 LDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLD 680
            ++++ +     +A+P+++ RL    ++   C  +  K+W E+  +NYHK+LD
Sbjct: 531 PEILEGILMKPHIAIPIVIKRLYMVNKKLRLCMREKKKIWREVVERNYHKALD 583



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 38/64 (59%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFN 105
           +DA+ +L  +K+ + +    YD+FLE M+DFK  +ID   V   V+ LF+    LI  FN
Sbjct: 101 SDAMMFLNKIKEEYANDMVTYDNFLETMRDFKFGKIDAEEVCRAVRVLFRDKAHLIETFN 160

Query: 106 TFLP 109
            +LP
Sbjct: 161 DYLP 164



 Score = 47.8 bits (112), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 75/326 (23%), Positives = 126/326 (38%), Gaps = 54/326 (16%)

Query: 123 PPPKKPVE---FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEAL 179
           PPP+   E     +A+ F+NKIK  +  D   Y +FL+ +  ++       EV + V  L
Sbjct: 89  PPPRTSHEDADLSDAMMFLNKIKEEYANDMVTYDNFLETMRDFKFGKIDAEEVCRAVRVL 148

Query: 180 FQDHPDLLEEFTHF--------------------LPDSSGAASIHYVPSGRNSILRDRSS 219
           F+D   L+E F  +                    LPD  G  SI   P  R   L     
Sbjct: 149 FRDKAHLIETFNDYLPAHLKFYGTSSSVVGSTSQLPDRPG-PSIGSSPQYRGG-LYGPGG 206

Query: 220 AMPTARQVHVDKKERAMASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERRDDHR 279
            +P   Q+ ++               V +P   H  V  K      +    E+ R +D  
Sbjct: 207 RIPNP-QLGMNPPPHMNPHCGIHQSYVSQPPVMHSSV--KVTGQGGKYMPYEQRRGEDFE 263

Query: 280 RERERDDRDFENDVNRDFS------------MQRFPHKRKSARKIEDSTAEPLHQGGEGD 327
           R + R  +DF   V + +S            +Q    K     K++      L +  +  
Sbjct: 264 RMKARQAQDFIQRVKKRYSHNPSIYRSFVEILQSHQVKNGLFEKMKAEVNSLLWESPDLC 323

Query: 328 ENFGMHPVSS----SYDDKNAMKSMFSQELSFCEKVKDKLRDDYQEFLRCLHLYTKEIIT 383
           E+F  + V +     +D++N +     Q +    K K+ L D    FL+C++ + ++ I 
Sbjct: 324 EDFERNFVPARRYIVHDERNVL-----QRIKELLKSKNLLDD----FLKCINYFNQKFIN 374

Query: 384 RSELQSLVGDLLGRYPDLMDGFNGFL 409
             +L  L+  LL R  +L+ GF  F+
Sbjct: 375 EKDLLELMAPLL-RNEELIKGFKSFI 399


>gi|357443069|ref|XP_003591812.1| Paired amphipathic helix protein Sin3 [Medicago truncatula]
 gi|355480860|gb|AES62063.1| Paired amphipathic helix protein Sin3 [Medicago truncatula]
          Length = 80

 Score = 74.7 bits (182), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 44/82 (53%), Positives = 50/82 (60%), Gaps = 8/82 (9%)

Query: 42  KLTTN--DALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRD 99
           KL+TN  D LAYL  VK  FQ    KYD FL V+  FK QRID  GV+        GH  
Sbjct: 2   KLSTNHDDRLAYLAEVKVAFQHNIMKYDQFLNVLMSFKDQRIDIRGVVT------AGHTY 55

Query: 100 LILGFNTFLPKGYEITLPLEDE 121
           LILGFNTFL K ++ITLP + E
Sbjct: 56  LILGFNTFLRKEHQITLPFQLE 77


>gi|328865007|gb|EGG13393.1| hypothetical protein DFA_11154 [Dictyostelium fasciculatum]
          Length = 191

 Score = 73.9 bits (180), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 41/124 (33%), Positives = 69/124 (55%), Gaps = 2/124 (1%)

Query: 72  VMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLEDEQPPPKKPVEF 131
           +MK+++    D      RV +LFK H+ LI GF+ FLP+ Y+     + E    ++  E 
Sbjct: 67  IMKEYRQHICDIPKTFQRVYDLFKDHKHLIKGFSQFLPREYKHVEEKKKEVKEGEEEDEK 126

Query: 132 EEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFT 191
           + A+ +V K+K RF+    +Y+ FL  L ++   N++  E+   +  LF  H DL+++F 
Sbjct: 127 DAAVLYVAKVKQRFKSTPQIYQQFLVTLKIFNGNNQA--EIASLINILFIGHNDLIQDFK 184

Query: 192 HFLP 195
           HFLP
Sbjct: 185 HFLP 188


>gi|226497792|ref|NP_001144673.1| uncharacterized protein LOC100277699 [Zea mays]
 gi|195645548|gb|ACG42242.1| hypothetical protein [Zea mays]
          Length = 133

 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/95 (41%), Positives = 61/95 (64%), Gaps = 10/95 (10%)

Query: 36  GGGGAQKLT---------TNDALAYLKAVKDIFQDKR-EKYDDFLEVMKDFKAQRIDTAG 85
           GGGGA+              DA+++++ VK+ F++++ +KY  FL VM+DF+ QR+D A 
Sbjct: 15  GGGGAKNPPGSSPSPSPSVEDAMSFVQMVKEAFKERQPDKYGLFLRVMEDFRNQRLDIAE 74

Query: 86  VIARVKELFKGHRDLILGFNTFLPKGYEITLPLED 120
           V +  K LF+ + DL L FN FLPKG++I L L++
Sbjct: 75  VASTAKALFQDNPDLALRFNVFLPKGHQIQLGLDE 109



 Score = 46.2 bits (108), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 5/67 (7%)

Query: 132 EEAINFVNKIKTRF---QGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           E+A++FV  +K  F   Q D   Y  FL ++  +R +   I EV    +ALFQD+PDL  
Sbjct: 34  EDAMSFVQMVKEAFKERQPDK--YGLFLRVMEDFRNQRLDIAEVASTAKALFQDNPDLAL 91

Query: 189 EFTHFLP 195
            F  FLP
Sbjct: 92  RFNVFLP 98


>gi|440797533|gb|ELR18619.1| paired amphipathic helix repeat-containing protein [Acanthamoeba
           castellanii str. Neff]
          Length = 143

 Score = 72.0 bits (175), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/79 (43%), Positives = 50/79 (63%)

Query: 34  GGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKEL 93
           GG    A       A++YL+ VK  F ++ E Y  FL VM  FK QR++  G++ +V +L
Sbjct: 23  GGAPAQAPSRVLKRAVSYLERVKRTFAERPEVYRAFLAVMHAFKEQRVEITGLVTQVYQL 82

Query: 94  FKGHRDLILGFNTFLPKGY 112
           F+GH +L++GFNTFLP G+
Sbjct: 83  FEGHPNLLIGFNTFLPIGH 101



 Score = 52.8 bits (125), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/84 (32%), Positives = 48/84 (57%), Gaps = 3/84 (3%)

Query: 124 PPKKPVE-FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQD 182
           P + P    + A++++ ++K  F     VY++FL +++ ++++   IT +  +V  LF+ 
Sbjct: 26  PAQAPSRVLKRAVSYLERVKRTFAERPEVYRAFLAVMHAFKEQRVEITGLVTQVYQLFEG 85

Query: 183 HPDLLEEFTHFLP--DSSGAASIH 204
           HP+LL  F  FLP   SSGA   H
Sbjct: 86  HPNLLIGFNTFLPIGHSSGAKPTH 109


>gi|414588418|tpg|DAA38989.1| TPA: hypothetical protein ZEAMMB73_474628 [Zea mays]
          Length = 1029

 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 34/77 (44%), Positives = 53/77 (68%), Gaps = 1/77 (1%)

Query: 41   QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGH-RD 99
            +++T  DA+ YL+ VKD+F+D   KY +FL++++D++  RI    +I R+K LF GH  +
Sbjct: 950  KEITMIDAIIYLEDVKDVFKDNPSKYSEFLDLLQDYRRDRIKIKDLIIRLKTLFTGHDPN 1009

Query: 100  LILGFNTFLPKGYEITL 116
            LIL F+ FLP  + ITL
Sbjct: 1010 LILDFSVFLPGEWAITL 1026



 Score = 43.9 bits (102), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 40/70 (57%), Gaps = 1/70 (1%)

Query: 127  KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDH-PD 185
            K +   +AI ++  +K  F+ +   Y  FLD+L  YR++   I ++   ++ LF  H P+
Sbjct: 950  KEITMIDAIIYLEDVKDVFKDNPSKYSEFLDLLQDYRRDRIKIKDLIIRLKTLFTGHDPN 1009

Query: 186  LLEEFTHFLP 195
            L+ +F+ FLP
Sbjct: 1010 LILDFSVFLP 1019


>gi|339253740|ref|XP_003372093.1| histone deacetylase interacting family protein [Trichinella
           spiralis]
 gi|316967541|gb|EFV51954.1| histone deacetylase interacting family protein [Trichinella
           spiralis]
          Length = 1174

 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/191 (29%), Positives = 98/191 (51%), Gaps = 12/191 (6%)

Query: 534 VLN-DHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLE---SVNVTTKRVEE 589
           VLN D +V     +E+  +  ++K   EE++F  EDDR+ELD ++    SV  +   ++ 
Sbjct: 417 VLNYDCFVVAMMSTEEQLYMSIKKTAAEEAMFDVEDDRYELDAIISINRSVIDSLTEIQG 476

Query: 590 LLEKINNNTIKTDGPIRVEDHF----TALNLRCIERLYGDHGLDVMDVLRKNASLALPVI 645
            LE++    +K+    R++D       ++  R + R++G    ++ + L+     A+ +I
Sbjct: 477 RLERMTKEEMKS---FRLDDRLGTNSVSVPARALRRVFGRTYEELFNGLKMVPHAAVSLI 533

Query: 646 LTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKE 705
           L  L++K  EW   R   +  W E   KNY K+LD R   F+Q D + +  ++L  EI+ 
Sbjct: 534 LEGLQEKATEWRSRRDLLSHDWRESNKKNYWKALDSRGMTFRQWDLRRMRTRSLVNEIES 593

Query: 706 ISEKKRKEDDV 716
           I   KRKE  +
Sbjct: 594 I-RVKRKEKGI 603



 Score = 53.1 bits (126), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 60/249 (24%), Positives = 96/249 (38%), Gaps = 67/249 (26%)

Query: 47  DALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNT 106
           + LAY++ V+  F      Y +FLE +++ + Q+IDT   + R+  LF     LI+    
Sbjct: 59  EVLAYIEKVRVQFMTNPSVYLEFLETLEEQRKQKIDTLTFVKRLLNLFLDCPHLIVNMKD 118

Query: 107 FLPKGY---------EITLP-------------------------------------LED 120
            LP G+         ++  P                                     ++ 
Sbjct: 119 LLPSGFWLDDRSNHVQLMWPNGQMVSLSKSDIIAERQAATTSRPPIVSSDSTVVSSVMQA 178

Query: 121 EQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALF 180
            + P  +  EF  A+ +VNKIK   Q       S    +   + E K    +Y+ V  LF
Sbjct: 179 AKQPANQAEEFNRALAYVNKIKKCAQQS-----SIQSAVERAKFEEK----LYKTVTNLF 229

Query: 181 QDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQVHVDKKERAMASHA 240
               DLL EFT FLP +S           +NS  R  S+AM  +R   VD   R++ +  
Sbjct: 230 SHDADLLSEFTRFLPTASSIV-------LQNS--RCVSAAMTHSR---VDTPLRSVTAIK 277

Query: 241 DRDLSVDRP 249
               ++ +P
Sbjct: 278 TATSAISKP 286


>gi|409083962|gb|EKM84319.1| hypothetical protein AGABI1DRAFT_110861 [Agaricus bisporus var.
           burnettii JB137-S8]
 gi|426200980|gb|EKV50903.1| hypothetical protein AGABI2DRAFT_189233 [Agaricus bisporus var.
           bisporus H97]
          Length = 112

 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 34/67 (50%), Positives = 41/67 (61%)

Query: 48  ALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTF 107
           A  YL  V+    + RE YD FLEVM  FK Q ++   V+ RV ELF GH  L+ GFN F
Sbjct: 21  AYEYLNQVRAQLLNNREVYDRFLEVMGRFKEQSLERLEVMERVAELFAGHHQLLSGFNQF 80

Query: 108 LPKGYEI 114
           LPKGY +
Sbjct: 81  LPKGYRL 87



 Score = 41.6 bits (96), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 18/62 (29%), Positives = 34/62 (54%)

Query: 134 AINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHF 193
           A  ++N+++ +   +  VY  FL+++  +++++    EV + V  LF  H  LL  F  F
Sbjct: 21  AYEYLNQVRAQLLNNREVYDRFLEVMGRFKEQSLERLEVMERVAELFAGHHQLLSGFNQF 80

Query: 194 LP 195
           LP
Sbjct: 81  LP 82


>gi|238573953|ref|XP_002387468.1| hypothetical protein MPER_13785 [Moniliophthora perniciosa FA553]
 gi|215442864|gb|EEB88398.1| hypothetical protein MPER_13785 [Moniliophthora perniciosa FA553]
          Length = 174

 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 46/140 (32%), Positives = 77/140 (55%), Gaps = 6/140 (4%)

Query: 511 SYRLLPKNYLIPSASQRTELGAEVLNDHWVS-VTSGSEDYSFKHMRKNQYEESLFRCEDD 569
           SYR LP + +    S R E+   VLND WVS  T  SE+  F   +KN YEE+L R E++
Sbjct: 35  SYRRLPASEVNVQCSGRDEMCRSVLNDDWVSHPTWASEETGFNVNKKNIYEEALHRSEEE 94

Query: 570 RFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TALNLRCIERLYG- 624
           R E D  +E++  T   +E +  KI+  +    G  +++ +      A++ R I+++YG 
Sbjct: 95  RHEYDFHIEAIARTIAVLEPINNKISMLSPDERGSFKLKPNLGGASKAIHQRVIKKIYGR 154

Query: 625 DHGLDVMDVLRKNASLALPV 644
           + G +V   +++  + A+PV
Sbjct: 155 EAGGEVWQTMQETPAFAIPV 174


>gi|38637391|dbj|BAD03650.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 140

 Score = 69.7 bits (169), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 35/71 (49%), Positives = 45/71 (63%)

Query: 41  QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDL 100
            KLTT DA+ Y+  +K+ F    EK+  F+  M DF   RI+T  VI RVK LF G+ DL
Sbjct: 66  HKLTTEDAMNYILTIKNKFLRHPEKFHAFIHTMIDFSRGRINTHTVIERVKILFDGYPDL 125

Query: 101 ILGFNTFLPKG 111
           +L FN FLP+G
Sbjct: 126 LLAFNKFLPRG 136


>gi|358348781|ref|XP_003638421.1| ATP-dependent RNA helicase DHX29 [Medicago truncatula]
 gi|355504356|gb|AES85559.1| ATP-dependent RNA helicase DHX29 [Medicago truncatula]
          Length = 337

 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/125 (34%), Positives = 67/125 (53%), Gaps = 10/125 (8%)

Query: 39  GAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHR 98
           G  K T+ DAL     +   +  K   +  F++++KDF+A+RID+  V ARVK LFKG+ 
Sbjct: 202 GKAKETSYDALNNTPCLLPTWISKASAHQ-FIKLIKDFRARRIDSIAVKARVKRLFKGNS 260

Query: 99  DLILGFNTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDI 158
           +L+LGFN+FLPK + I   +          + F++A   +  IK  FQ     Y  F  +
Sbjct: 261 NLMLGFNSFLPKEHRIQTFIS---------LRFKDASPLLKAIKVAFQDKRESYYEFSKV 311

Query: 159 LNMYR 163
           L  ++
Sbjct: 312 LQGFK 316



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/55 (50%), Positives = 36/55 (65%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGH 97
           L   DA   LKA+K  FQDKRE Y +F +V++ FK +RID+    ARVK+L KG 
Sbjct: 282 LRFKDASPLLKAIKVAFQDKRESYYEFSKVLQGFKDKRIDSKDTAARVKKLLKGQ 336


>gi|218200985|gb|EEC83412.1| hypothetical protein OsI_28868 [Oryza sativa Indica Group]
 gi|222640389|gb|EEE68521.1| hypothetical protein OsJ_26960 [Oryza sativa Japonica Group]
          Length = 128

 Score = 69.3 bits (168), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/71 (49%), Positives = 45/71 (63%)

Query: 41  QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDL 100
            KLTT DA+ Y+  +K+ F    EK+  F+  M DF   RI+T  VI RVK LF G+ DL
Sbjct: 54  HKLTTEDAMNYILTIKNKFLRHPEKFHAFIHTMIDFSRGRINTHTVIERVKILFDGYPDL 113

Query: 101 ILGFNTFLPKG 111
           +L FN FLP+G
Sbjct: 114 LLAFNKFLPRG 124


>gi|302696423|ref|XP_003037890.1| hypothetical protein SCHCODRAFT_46699 [Schizophyllum commune H4-8]
 gi|300111587|gb|EFJ02988.1| hypothetical protein SCHCODRAFT_46699 [Schizophyllum commune H4-8]
          Length = 115

 Score = 68.9 bits (167), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/78 (46%), Positives = 48/78 (61%), Gaps = 1/78 (1%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
           +   DAL YL AVK  FQD+ E Y +FL V+   KA  ID    + RV E+ +G+ +LI+
Sbjct: 14  IDVTDALHYLDAVKARFQDEPESYKEFLGVLSALKAGEIDMRQCVQRVVEMLRGYPELIV 73

Query: 103 GFNTFLPKGYEITLPLED 120
           GFN FLP+G  I  P+ D
Sbjct: 74  GFNVFLPRG-AILDPVSD 90



 Score = 43.1 bits (100), Expect = 0.81,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 38/67 (56%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
           ++  +A+++++ +K RFQ +   YK FL +L+  +     + +  Q V  + + +P+L+ 
Sbjct: 14  IDVTDALHYLDAVKARFQDEPESYKEFLGVLSALKAGEIDMRQCVQRVVEMLRGYPELIV 73

Query: 189 EFTHFLP 195
            F  FLP
Sbjct: 74  GFNVFLP 80


>gi|408397709|gb|EKJ76849.1| hypothetical protein FPSE_03035 [Fusarium pseudograminearum CS3096]
          Length = 617

 Score = 68.9 bits (167), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 34/73 (46%), Positives = 45/73 (61%), Gaps = 5/73 (6%)

Query: 47  DALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRD-----LI 101
           DAL YL  V+   +D    Y+ FL++MKDFKA+ IDT GV+ +V+ LF    +     + 
Sbjct: 469 DALDYLDKVRSACRDTPNVYNQFLDIMKDFKAELIDTQGVVHQVRGLFVDTNNEELSSMF 528

Query: 102 LGFNTFLPKGYEI 114
           LGFN FLP GY I
Sbjct: 529 LGFNRFLPPGYSI 541


>gi|30277697|gb|AAH51536.1| Sin3b protein, partial [Mus musculus]
          Length = 190

 Score = 68.9 bits (167), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/92 (43%), Positives = 53/92 (57%), Gaps = 16/92 (17%)

Query: 116 LPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKE---------- 165
           +PLE +       VEF  AI++VNKIKTRF     +Y+SFL+IL+ Y+KE          
Sbjct: 42  VPLESDS------VEFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLHTKGRPFR 95

Query: 166 NKSITEVYQEVEALFQDHPDLLEEFTHFLPDS 197
             S  EV+ EV  LF+   DLL EF  FLP++
Sbjct: 96  GMSEEEVFTEVANLFRGQEDLLSEFGQFLPEA 127



 Score = 49.7 bits (117), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 10/76 (13%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAG----------VIARVKELFK 95
           N+A++Y+  +K  F D  E Y  FLE++  ++ +++ T G          V   V  LF+
Sbjct: 52  NNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLHTKGRPFRGMSEEEVFTEVANLFR 111

Query: 96  GHRDLILGFNTFLPKG 111
           G  DL+  F  FLP+ 
Sbjct: 112 GQEDLLSEFGQFLPEA 127


>gi|429962946|gb|ELA42490.1| hypothetical protein VICG_00589 [Vittaforma corneae ATCC 50505]
          Length = 454

 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 60/201 (29%), Positives = 99/201 (49%), Gaps = 24/201 (11%)

Query: 511 SYRLLPKNYLIPSASQRTELGAEVLNDHWVSV-TSGSED--YSFKHMRKNQYEESLFRCE 567
           SY++LP    + S+     L  EVLN   VSV T  SED  Y F+H  KN  E+ L R  
Sbjct: 60  SYKILPIEITLDSS---IPLFKEVLNCTCVSVSTHESEDDTYVFRH--KNHSEDLLTRIV 114

Query: 568 DDRFELDMLLESVNVTTKRVEELLEKINN-----NTIKTDGPIRVEDHFTALNLRCIERL 622
           D+R E D++++ +     ++EE+ E + +     N I+  G +  E      + +C E  
Sbjct: 115 DERSEADLVMDRLKYLIIKLEEIYESVEDVELAPNDIQMSGSLVKETLKNVYDTKCPE-- 172

Query: 623 YGDHGLDVMDVLRKNASLALPVILTRL-KQKQEEWARCRSDFNKVWAEIYSKNYHKSLDH 681
                  +++ +  N   A+PV+L RL K  +E   R R DF K W +I  ++Y+K+ D 
Sbjct: 173 -------ILESILINPKKAIPVVLKRLNKVFRENLERLR-DFKKFWRDIAEEHYYKAYDT 224

Query: 682 RSFYFKQQDSKSLGAKALSAE 702
           +   ++ Q+   L  + +  E
Sbjct: 225 KGVLYRSQEKNYLSLRNVECE 245


>gi|391873387|gb|EIT82430.1| hypothetical protein Ao3042_00456 [Aspergillus oryzae 3.042]
          Length = 216

 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 27/67 (40%), Positives = 47/67 (70%)

Query: 133 EAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTH 192
           +A++FVNK+K RF     ++  FL IL  Y++E++ + +VY++VE LF   PDL+++F  
Sbjct: 147 DAVSFVNKVKNRFAEHPELFSEFLLILQAYQRESRPLRKVYEQVEELFDAEPDLMKDFKK 206

Query: 193 FLPDSSG 199
           FLP+++ 
Sbjct: 207 FLPEATA 213



 Score = 42.4 bits (98), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 21/76 (27%), Positives = 41/76 (53%)

Query: 36  GGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFK 95
           G G    ++  DA++++  VK+ F +  E + +FL +++ ++ +      V  +V+ELF 
Sbjct: 136 GSGNDGCMSAMDAVSFVNKVKNRFAEHPELFSEFLLILQAYQRESRPLRKVYEQVEELFD 195

Query: 96  GHRDLILGFNTFLPKG 111
              DL+  F  FLP+ 
Sbjct: 196 AEPDLMKDFKKFLPEA 211


>gi|83775819|dbj|BAE65938.1| unnamed protein product [Aspergillus oryzae RIB40]
          Length = 216

 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 27/67 (40%), Positives = 47/67 (70%)

Query: 133 EAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTH 192
           +A++FVNK+K RF     ++  FL IL  Y++E++ + +VY++VE LF   PDL+++F  
Sbjct: 147 DAVSFVNKVKNRFAEHPELFSEFLLILQAYQRESRPLRKVYEQVEELFDAEPDLMKDFKK 206

Query: 193 FLPDSSG 199
           FLP+++ 
Sbjct: 207 FLPEATA 213



 Score = 42.4 bits (98), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 21/76 (27%), Positives = 41/76 (53%)

Query: 36  GGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFK 95
           G G    ++  DA++++  VK+ F +  E + +FL +++ ++ +      V  +V+ELF 
Sbjct: 136 GSGNDGCMSAMDAVSFVNKVKNRFAEHPELFSEFLLILQAYQRESRPLRKVYEQVEELFD 195

Query: 96  GHRDLILGFNTFLPKG 111
              DL+  F  FLP+ 
Sbjct: 196 AEPDLMKDFKKFLPEA 211


>gi|297831178|ref|XP_002883471.1| hypothetical protein ARALYDRAFT_898935 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297329311|gb|EFH59730.1| hypothetical protein ARALYDRAFT_898935 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 384

 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 79/169 (46%), Gaps = 27/169 (15%)

Query: 506 ERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRK-NQYEESLF 564
           E  TP+YRL+PK      A QR  + + VLN+     T   + Y+F+  +     EE  +
Sbjct: 222 ELLTPNYRLIPK------AKQRP-VSSSVLNN-----TCAVKRYNFQGCKNLTDIEEDRY 269

Query: 565 RCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFTALNLRCIERLYG 624
           +CED  FE D+L+  +    +  EE++           G + +ED       RC+E +YG
Sbjct: 270 KCEDQMFEADVLMGVLRTAVENAEEVIR----------GDMVLEDLGEKF-YRCVEMMYG 318

Query: 625 DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSK 673
               D+ +++ +N   A PVIL RL QK  E    R     VW +   K
Sbjct: 319 G---DMYEIVTENHQRAFPVILNRLNQKLREVTALRESLKPVWKQTIEK 364


>gi|390594320|gb|EIN03732.1| hypothetical protein PUNSTDRAFT_55996 [Punctularia strigosozonata
           HHB-11173 SS5]
          Length = 111

 Score = 67.4 bits (163), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 34/77 (44%), Positives = 46/77 (59%), Gaps = 2/77 (2%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELF--KGHRDL 100
           L+ NDAL YL  V+    D+ + +  FL + KDF+   I T+  + R+ ELF   GH +L
Sbjct: 12  LSVNDALRYLDQVRSALYDQPDVHQRFLMIFKDFRDAVISTSTCMTRMGELFITSGHPEL 71

Query: 101 ILGFNTFLPKGYEITLP 117
           I GFNTFLP GY +  P
Sbjct: 72  IDGFNTFLPSGYAVQQP 88


>gi|392558463|gb|EIW51651.1| acyl-CoA N-acyltransferase [Trametes versicolor FP-101664 SS1]
          Length = 439

 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 29/64 (45%), Positives = 42/64 (65%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFN 105
           +DA+ YL  VK  F ++ + Y  FLE+++DFK  R+DT GV+ R   +F GH  L+ G N
Sbjct: 350 SDAIRYLDQVKAQFSERPDAYKTFLEILQDFKNGRLDTPGVLERAAIVFHGHPSLMQGMN 409

Query: 106 TFLP 109
           TF+P
Sbjct: 410 TFIP 413



 Score = 45.4 bits (106), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 19/69 (27%), Positives = 36/69 (52%)

Query: 128 PVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLL 187
           P  F +AI +++++K +F      YK+FL+IL  ++        V +    +F  HP L+
Sbjct: 346 PNAFSDAIRYLDQVKAQFSERPDAYKTFLEILQDFKNGRLDTPGVLERAAIVFHGHPSLM 405

Query: 188 EEFTHFLPD 196
           +    F+P+
Sbjct: 406 QGMNTFIPN 414


>gi|159164533|pdb|2F05|A Chain A, Solution Structure Of Free Pah2 Domain Of Msin3b
          Length = 105

 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 37/79 (46%), Positives = 48/79 (60%), Gaps = 10/79 (12%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKEN----------KSITEVYQEVEA 178
           VEF  AI++VNKIKTRF     +Y+SFL+IL+ Y+KE            S  EV+ EV  
Sbjct: 5   VEFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLHTKGRPFRGMSEEEVFTEVAN 64

Query: 179 LFQDHPDLLEEFTHFLPDS 197
           LF+   DLL EF  FLP++
Sbjct: 65  LFRGQEDLLSEFGQFLPEA 83



 Score = 48.5 bits (114), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 10/76 (13%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAG----------VIARVKELFK 95
           N+A++Y+  +K  F D  E Y  FLE++  ++ +++ T G          V   V  LF+
Sbjct: 8   NNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLHTKGRPFRGMSEEEVFTEVANLFR 67

Query: 96  GHRDLILGFNTFLPKG 111
           G  DL+  F  FLP+ 
Sbjct: 68  GQEDLLSEFGQFLPEA 83


>gi|397614459|gb|EJK62809.1| hypothetical protein THAOC_16565 [Thalassiosira oceanica]
          Length = 713

 Score = 67.0 bits (162), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 52/86 (60%)

Query: 39  GAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHR 98
           G  +   ++A  Y+  VK+++     +Y  FLE ++++++++++   VI R+ +LFKG R
Sbjct: 22  GRGRAQIDNARKYVARVKEMYGSDSRQYRGFLEALREYRSRQLEPLDVIDRIAQLFKGDR 81

Query: 99  DLILGFNTFLPKGYEITLPLEDEQPP 124
            LI+GFN FLP+ Y I      + PP
Sbjct: 82  SLIIGFNAFLPEEYHIYTGRAVQTPP 107


>gi|390599387|gb|EIN08783.1| hypothetical protein PUNSTDRAFT_133964 [Punctularia strigosozonata
           HHB-11173 SS5]
          Length = 390

 Score = 66.6 bits (161), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 34/71 (47%), Positives = 44/71 (61%), Gaps = 1/71 (1%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFN 105
            DALAYL  VK    +  E Y+ FL +M+ F++  +DT+G+I  +  LF  H  LIL FN
Sbjct: 284 TDALAYLDQVKAELNNPVE-YNKFLILMQKFRSGNLDTSGMIDEIIVLFNSHPSLILAFN 342

Query: 106 TFLPKGYEITL 116
           TFLP GY I L
Sbjct: 343 TFLPSGYYIVL 353


>gi|238506199|ref|XP_002384301.1| sin3b, putative [Aspergillus flavus NRRL3357]
 gi|317158546|ref|XP_001827071.2| protein sin3b [Aspergillus oryzae RIB40]
 gi|220689014|gb|EED45365.1| sin3b, putative [Aspergillus flavus NRRL3357]
          Length = 93

 Score = 66.6 bits (161), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 27/67 (40%), Positives = 47/67 (70%)

Query: 133 EAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTH 192
           +A++FVNK+K RF     ++  FL IL  Y++E++ + +VY++VE LF   PDL+++F  
Sbjct: 24  DAVSFVNKVKNRFAEHPELFSEFLLILQAYQRESRPLRKVYEQVEELFDAEPDLMKDFKK 83

Query: 193 FLPDSSG 199
           FLP+++ 
Sbjct: 84  FLPEATA 90



 Score = 42.0 bits (97), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 23/85 (27%), Positives = 45/85 (52%), Gaps = 3/85 (3%)

Query: 27  GQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGV 86
           G++   G G  G    ++  DA++++  VK+ F +  E + +FL +++ ++ +      V
Sbjct: 7   GRSSQKGSGNDGC---MSAMDAVSFVNKVKNRFAEHPELFSEFLLILQAYQRESRPLRKV 63

Query: 87  IARVKELFKGHRDLILGFNTFLPKG 111
             +V+ELF    DL+  F  FLP+ 
Sbjct: 64  YEQVEELFDAEPDLMKDFKKFLPEA 88


>gi|296804496|ref|XP_002843100.1| predicted protein [Arthroderma otae CBS 113480]
 gi|238845702|gb|EEQ35364.1| predicted protein [Arthroderma otae CBS 113480]
          Length = 397

 Score = 66.6 bits (161), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 45/80 (56%)

Query: 35  GGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELF 94
           G  G    +T + A  YL  VK  F D+ + Y+ FL ++ D+K Q  D    ++RV +LF
Sbjct: 49  GASGQELPITMSKAYNYLDLVKAQFIDRPDIYNTFLRILADYKNQVTDIPSAVSRVSKLF 108

Query: 95  KGHRDLILGFNTFLPKGYEI 114
            G+ ++I GFNTFL   Y I
Sbjct: 109 IGYPNIIQGFNTFLAPIYRI 128


>gi|22760651|dbj|BAC11280.1| unnamed protein product [Homo sapiens]
          Length = 573

 Score = 66.2 bits (160), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/128 (34%), Positives = 65/128 (50%), Gaps = 7/128 (5%)

Query: 652 KQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKR 711
           K+EEW   +  FNKVW E   K Y KSLDH+   FKQ D+K L +K+L  EI+ I ++++
Sbjct: 2   KEEEWREAQRGFNKVWREQNEKYYLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQ 61

Query: 712 KEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLIKYSCGEMCTTEQLD--KVMKIW 769
           ++     A        + PHL   Y D  I ED   LI +        ++ D  K+ +I 
Sbjct: 62  EQ-----ATEENAGVPVGPHLSLAYEDKQILEDAAALIIHHVKRQTGIQKEDKYKIKQIM 116

Query: 770 TTFLEPML 777
             F+  +L
Sbjct: 117 HHFIPDLL 124


>gi|226498732|ref|NP_001144537.1| uncharacterized protein LOC100277534 [Zea mays]
 gi|195643572|gb|ACG41254.1| hypothetical protein [Zea mays]
          Length = 97

 Score = 65.9 bits (159), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/73 (43%), Positives = 53/73 (72%), Gaps = 1/73 (1%)

Query: 49  LAYLKAVKDIFQDKR-EKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTF 107
           +++++ VK+ F++++ +KY  FL VM+DF+ QR+D A V +  K LF+ + DL L FN F
Sbjct: 1   MSFVQMVKEAFKERQPDKYGLFLRVMEDFRNQRLDIAEVASTAKALFQDNPDLALRFNVF 60

Query: 108 LPKGYEITLPLED 120
           LPKG++I L L++
Sbjct: 61  LPKGHQIQLGLDE 73



 Score = 41.2 bits (95), Expect = 3.0,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 1/62 (1%)

Query: 135 INFVNKIKTRF-QGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHF 193
           ++FV  +K  F +     Y  FL ++  +R +   I EV    +ALFQD+PDL   F  F
Sbjct: 1   MSFVQMVKEAFKERQPDKYGLFLRVMEDFRNQRLDIAEVASTAKALFQDNPDLALRFNVF 60

Query: 194 LP 195
           LP
Sbjct: 61  LP 62


>gi|253722145|pdb|1E91|A Chain A, Structure Of The Complex Of The Mad1-Sin3b Interaction
           Domains
 gi|253722321|pdb|1PD7|A Chain A, Extended Sid Of Mad1 Bound To The Pah2 Domain Of Msin3b
          Length = 85

 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/79 (46%), Positives = 48/79 (60%), Gaps = 10/79 (12%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKEN----------KSITEVYQEVEA 178
           VEF  AI++VNKIKTRF     +Y+SFL+IL+ Y+KE            S  EV+ EV  
Sbjct: 5   VEFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLHTKGRPFRGMSEEEVFTEVAN 64

Query: 179 LFQDHPDLLEEFTHFLPDS 197
           LF+   DLL EF  FLP++
Sbjct: 65  LFRGQEDLLSEFGQFLPEA 83



 Score = 47.8 bits (112), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 10/76 (13%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAG----------VIARVKELFK 95
           N+A++Y+  +K  F D  E Y  FLE++  ++ +++ T G          V   V  LF+
Sbjct: 8   NNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLHTKGRPFRGMSEEEVFTEVANLFR 67

Query: 96  GHRDLILGFNTFLPKG 111
           G  DL+  F  FLP+ 
Sbjct: 68  GQEDLLSEFGQFLPEA 83


>gi|326517725|dbj|BAK03781.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 218

 Score = 65.1 bits (157), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/40 (72%), Positives = 34/40 (85%)

Query: 41  QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQR 80
           QKLTTND L YLKAVKD FQD R KY++FLEVM+DF ++R
Sbjct: 166 QKLTTNDTLVYLKAVKDKFQDNRAKYEEFLEVMRDFNSER 205


>gi|357494375|ref|XP_003617476.1| SIN3 component histone deacetylase complex [Medicago truncatula]
 gi|355518811|gb|AET00435.1| SIN3 component histone deacetylase complex [Medicago truncatula]
          Length = 199

 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/51 (60%), Positives = 37/51 (72%)

Query: 962  GECSRQNISTNGVMTEGAKILRYNAESVKQFKIEREEGELSPNGDFEEDNF 1012
            G+ +R   STNGV+  G  + RY  ES +QFK E+EEGELSPNGDFEEDN 
Sbjct: 4    GDSARLCASTNGVIAGGTDMCRYQEESNRQFKSEKEEGELSPNGDFEEDNL 54


>gi|299756365|ref|XP_002912192.1| hypothetical protein CC1G_13724 [Coprinopsis cinerea okayama7#130]
 gi|298411644|gb|EFI28698.1| hypothetical protein CC1G_13724 [Coprinopsis cinerea okayama7#130]
          Length = 195

 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 76/178 (42%), Gaps = 36/178 (20%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFN 105
           N AL+YL AV++ F    E Y  FLE M  +  + I  + ++  V  +      L+ GFN
Sbjct: 13  NVALSYLAAVEEQFNCAPEHYHRFLEYMTQYNRKEITASSLVTEVSAILYKFEHLVDGFN 72

Query: 106 TFLPKGYEI-TLPLEDEQPPPKKPVE--------------------------------FE 132
            FLP G+ + T P  DE+ P    V                                 F+
Sbjct: 73  AFLPDGWTMKTSP--DEKAPNAWVVNINTPEGEFIRRYSEVVLGEEEEEQEESSTKEEFK 130

Query: 133 EAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEF 190
           + I  VN I+TR+  D  +Y+ FL  ++     + S  E++  V+ L  + PDL+  F
Sbjct: 131 QMIQLVNDIQTRYTDDPAIYREFLKAIDP-NSNSGSREEIFAVVKNLLHESPDLVGRF 187


>gi|401405571|ref|XP_003882235.1| Predicted CDS Pa_1_8910, related [Neospora caninum Liverpool]
 gi|325116650|emb|CBZ52203.1| Predicted CDS Pa_1_8910, related [Neospora caninum Liverpool]
          Length = 586

 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 44/183 (24%), Positives = 85/183 (46%), Gaps = 6/183 (3%)

Query: 506 ERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFR 565
           ER   SYR LP ++ +   S R  L  EV ND W S+   SE    +    N++EE L  
Sbjct: 359 ERRGSSYRRLPPDWPLLECSGRDALCWEVFNDSWASIPDSSES---QARFTNRHEEQLLL 415

Query: 566 CEDDRFELDMLLESVNVTTKRVEELLEKINNNTI--KTDGPIRVEDHFTALNLRCIERLY 623
            ED R+E D+ +  +  T +R+E + E++       +    +RV   F+ L+   +  ++
Sbjct: 416 LEDTRYEWDLRIGRLEATLRRLERITEQLTMIAPERRRCATVRVST-FSQLDATILRTIF 474

Query: 624 GDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRS 683
           G +   V+  +  +   ++P++   L  K ++W   R      W +  + ++  ++D + 
Sbjct: 475 GQNTEQVVSSICLSPLTSIPIVHDTLVTKLKQWRAMRYFLQLGWTQQEAPHWAGAIDFKK 534

Query: 684 FYF 686
            + 
Sbjct: 535 RFI 537


>gi|291243123|ref|XP_002741445.1| PREDICTED: D-tyrosyl-tRNA deacylase 1-like [Saccoglossus
           kowalevskii]
          Length = 320

 Score = 63.9 bits (154), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 46/76 (60%)

Query: 41  QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDL 100
           + +T + A++++  V+  F    E Y+ FL++MKD + Q IDT  V+ R+  LFKG  +L
Sbjct: 174 KNITADHAVSFVDKVRSSFHGNPEFYEHFLDIMKDVRNQSIDTLTVVYRIGVLFKGRPEL 233

Query: 101 ILGFNTFLPKGYEITL 116
           I  FN FLP  Y + +
Sbjct: 234 IHDFNLFLPSNYRLYI 249



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 50/103 (48%), Gaps = 22/103 (21%)

Query: 114 ITLPLEDEQPP---------PKKPVEF------------EEAINFVNKIKTRFQGDDHVY 152
           +T+P+ D  PP         PK PV              + A++FV+K+++ F G+   Y
Sbjct: 141 VTIPI-DSPPPKESPDKPRTPKTPVAVVKPESKKKNITADHAVSFVDKVRSSFHGNPEFY 199

Query: 153 KSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLP 195
           + FLDI+   R ++     V   +  LF+  P+L+ +F  FLP
Sbjct: 200 EHFLDIMKDVRNQSIDTLTVVYRIGVLFKGRPELIHDFNLFLP 242


>gi|15230085|ref|NP_189069.1| uncharacterized protein [Arabidopsis thaliana]
 gi|11994687|dbj|BAB02925.1| unnamed protein product [Arabidopsis thaliana]
 gi|332643361|gb|AEE76882.1| uncharacterized protein [Arabidopsis thaliana]
          Length = 374

 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 51/170 (30%), Positives = 79/170 (46%), Gaps = 27/170 (15%)

Query: 505 CERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRK-NQYEESL 563
            ER TP+Y+L+PK        ++T + + VLN+ WV V S    Y  +  +     E+ +
Sbjct: 211 TERATPNYKLIPK-------EEQTPVSSTVLNNTWV-VNS----YDIQAQKNLTDIEKDM 258

Query: 564 FRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFTALNLRCIERLY 623
           +  ED  FELDML+  +    K  EE++          +G   ++D       RC E LY
Sbjct: 259 YNWEDQMFELDMLVGFLTSAAKNAEEVI----------NGERDLKD-LGGKFYRCAENLY 307

Query: 624 GDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSK 673
           G    D+++++++N    LP IL RL QK  E    R     V  +   K
Sbjct: 308 GR---DMLEIVKENHQRVLPAILNRLNQKLREVTLVRERLKPVLKQTIEK 354


>gi|297850766|ref|XP_002893264.1| hypothetical protein ARALYDRAFT_889831 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339106|gb|EFH69523.1| hypothetical protein ARALYDRAFT_889831 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 163

 Score = 63.5 bits (153), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 51/140 (36%), Positives = 76/140 (54%), Gaps = 6/140 (4%)

Query: 69  FLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLEDEQPP-PKK 127
           FL     +   +    GVIA+VKEL K H DL+LGFN FL    +I +P E ++     K
Sbjct: 17  FLPAFHTYLPHQPGRDGVIAKVKELLKDHHDLLLGFNVFLSAEAKIVIPSEAKKAEYLAK 76

Query: 128 PVEFE----EAINFVNKIKTRFQG-DDHVYKSFLDILNMYRKENKSITEVYQEVEALFQD 182
             + E    +A +F+NK+KTR +  D HV  SF  I+ M+++   S+ EV++EV  +   
Sbjct: 77  SADTEKKHADAEDFMNKLKTRSRTLDTHVVGSFKAIMRMFKEGKMSVKEVHKEVTDILYY 136

Query: 183 HPDLLEEFTHFLPDSSGAAS 202
           H DL+ +F  F   +   AS
Sbjct: 137 HEDLINDFLRFFEKNDPIAS 156


>gi|357488571|ref|XP_003614573.1| Dihydrolipoyllysine-residue acetyltransferase component 3 of
           pyruvate dehydrogenase complex [Medicago truncatula]
 gi|355515908|gb|AES97531.1| Dihydrolipoyllysine-residue acetyltransferase component 3 of
           pyruvate dehydrogenase complex [Medicago truncatula]
          Length = 258

 Score = 62.8 bits (151), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 32/50 (64%), Positives = 35/50 (70%), Gaps = 1/50 (2%)

Query: 66  YDDFLEVMKDFKA-QRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEI 114
           +D F+     F A  R DT GVIARVKELFKGH  LI GFNTFLPKG +I
Sbjct: 203 FDSFVGCDYLFLAVSRTDTTGVIARVKELFKGHNHLIFGFNTFLPKGVDI 252


>gi|123444531|ref|XP_001311035.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|121892829|gb|EAX98105.1| hypothetical protein TVAG_439490 [Trichomonas vaginalis G3]
          Length = 742

 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 47/174 (27%), Positives = 85/174 (48%), Gaps = 2/174 (1%)

Query: 511 SYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDR 570
           SY LLP   +  + S R        ND W ++++   D +FK ++KNQYE+ ++  ED+R
Sbjct: 212 SYGLLPPEKVDCTCSGRRVSEYCACNDRW-AISAAGLDCNFKFVQKNQYEDRIYDNEDER 270

Query: 571 FELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFTALNLRCIERLYGDHGLD- 629
            ++D+ +  +  +  R+  L   I +  IK D     + + T L+   +E +YG   LD 
Sbjct: 271 VQMDVAITRMRSSILRLTSLKTAILDPRIKIDTSSFPQCNLTPLDFLTLEDIYGPTNLDS 330

Query: 630 VMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRS 683
           V+  + +N    L  ++ R  +K  + +  R      + E   +N  KSLD ++
Sbjct: 331 VLFAMTQNPVKMLDTVIERTSEKMNDLSEFRRQKEPEYHEFNKRNIKKSLDKKN 384


>gi|224124430|ref|XP_002330021.1| predicted protein [Populus trichocarpa]
 gi|222871446|gb|EEF08577.1| predicted protein [Populus trichocarpa]
          Length = 87

 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/78 (42%), Positives = 47/78 (60%), Gaps = 2/78 (2%)

Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           K  ++ EEA++FV K++ R   +   YK FL  L  YR + K + +VY++V  LF D+PD
Sbjct: 5   KVTIDHEEAVDFVRKVQKRINKE--AYKDFLMTLCAYRNKCKDVADVYRDVVELFADYPD 62

Query: 186 LLEEFTHFLPDSSGAASI 203
           LLE F  FLP S   A +
Sbjct: 63  LLEGFHRFLPTSEVIADL 80


>gi|357455591|ref|XP_003598076.1| Paired amphipathic helix protein Sin3 [Medicago truncatula]
 gi|355487124|gb|AES68327.1| Paired amphipathic helix protein Sin3 [Medicago truncatula]
          Length = 83

 Score = 62.8 bits (151), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/67 (52%), Positives = 45/67 (67%), Gaps = 1/67 (1%)

Query: 47  DALAYLKAVKDIFQDK-REKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFN 105
           +ALA +    +  QDK REKYD+FLE++KDF A  ID   V  RV ELF+GH++LIL F 
Sbjct: 7   NALALITIKDEFDQDKDREKYDEFLEIVKDFLAAAIDRNVVATRVNELFQGHKNLILEFK 66

Query: 106 TFLPKGY 112
            FL K +
Sbjct: 67  DFLTKKF 73


>gi|15221700|ref|NP_173832.1| paired amphipathic helix repeat-containing protein [Arabidopsis
           thaliana]
 gi|2829874|gb|AAC00582.1| Hypothetical protein [Arabidopsis thaliana]
 gi|332192376|gb|AEE30497.1| paired amphipathic helix repeat-containing protein [Arabidopsis
           thaliana]
          Length = 744

 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/95 (41%), Positives = 51/95 (53%), Gaps = 7/95 (7%)

Query: 102 LGFNTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQG-DDHVYKSFLDILN 160
           L F   LP     T+P E E+P         + +NF+NK+KTRFQ  D HV  SF  I+ 
Sbjct: 347 LNFMNKLPTKARRTIPSEAEKP------THTDELNFMNKLKTRFQRIDTHVVGSFHSIMT 400

Query: 161 MYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLP 195
           MY++  KS  EV++EV  L   H DL  +FT   P
Sbjct: 401 MYKEGKKSRKEVHEEVCDLLYYHEDLRADFTRIFP 435



 Score = 58.9 bits (141), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 41/56 (73%)

Query: 44  TTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRD 99
           T +DA +Y+ +VK+ F D+  KY +FL+++ D+KA+R+D   VIARV EL K HR+
Sbjct: 173 TLDDARSYIDSVKEAFHDEPAKYAEFLKLLNDYKARRLDADSVIARVDELTKDHRN 228



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 52/87 (59%), Gaps = 1/87 (1%)

Query: 36  GGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFK 95
           G   +Q+ T  DA++Y+++VK+ F D+  K+D+F   + + +  R++   + AR+ EL  
Sbjct: 3   GRSVSQEPTMADAVSYIESVKEEFHDEPAKFDEFRMRLNEVRDDRVEKDRITARINELIS 62

Query: 96  GHRDLILGFNTFLPKGYEITLPLEDEQ 122
           G+  L LG   F P+  EIT+P + EQ
Sbjct: 63  GNPKLHLGSKVFFPEA-EITIPPKVEQ 88



 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/79 (45%), Positives = 41/79 (51%), Gaps = 11/79 (13%)

Query: 139 NKIKTRFQG-DDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLPDS 197
           NK   RFQG   HV  S L IL MY + NKS  E YQEV +L Q+H DL+ EF  +    
Sbjct: 673 NKKNARFQGYGSHVVNSVLQILKMYSEGNKSKDEAYQEVVSLLQNHVDLVMEFGDYF--- 729

Query: 198 SGAASIHYVPSGRNSILRD 216
           SG        S  N  LRD
Sbjct: 730 SGI-------SAYNRFLRD 741



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 38/68 (55%)

Query: 44  TTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILG 103
           T  + + Y+  VK+ F D+  K+ +FL +M D    +I+ A   AR+ E+ KGH  L+L 
Sbjct: 499 TIRETVTYIADVKEAFLDEPAKFHEFLRLMNDVCDHKIEEANGSARMAEIIKGHPRLLLV 558

Query: 104 FNTFLPKG 111
            + F PK 
Sbjct: 559 LSVFFPKS 566


>gi|237837017|ref|XP_002367806.1| histone deacetylase interacting domain-containing protein
           [Toxoplasma gondii ME49]
 gi|211965470|gb|EEB00666.1| histone deacetylase interacting domain-containing protein
           [Toxoplasma gondii ME49]
          Length = 415

 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 83/179 (46%), Gaps = 6/179 (3%)

Query: 506 ERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFR 565
           ER   SYR LP ++ +   S R  L  EV ND W S+   SE    +    N++EE L  
Sbjct: 188 ERRGSSYRRLPPDWPLLECSGRDALCWEVFNDSWASIPDSSES---QARFTNRHEEQLLL 244

Query: 566 CEDDRFELDMLLESVNVTTKRVEELLEKINNNTI--KTDGPIRVEDHFTALNLRCIERLY 623
            ED R+E D+ +  +  T +R+E + E++       +    +RV   F+ L++  +  ++
Sbjct: 245 LEDTRYEWDLRIGRLEATLRRLEHITEQLTMIAPERRQFATVRV-SAFSQLDVTILRTIF 303

Query: 624 GDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHR 682
           G     V+  +  +   ++P +   +  K ++W   R      W +  + ++  ++D +
Sbjct: 304 GQDAEQVVSSICLSPLASIPTVHDTMVAKLKQWRAMRYFLQLGWTQQEAPHWAGAVDFK 362


>gi|221481966|gb|EEE20332.1| conserved hypothetical protein [Toxoplasma gondii GT1]
 gi|221505043|gb|EEE30697.1| sin3b, putative [Toxoplasma gondii VEG]
          Length = 415

 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 83/179 (46%), Gaps = 6/179 (3%)

Query: 506 ERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFR 565
           ER   SYR LP ++ +   S R  L  EV ND W S+   SE    +    N++EE L  
Sbjct: 188 ERRGSSYRRLPPDWPLLECSGRDALCWEVFNDSWASIPDSSES---QARFTNRHEEQLLL 244

Query: 566 CEDDRFELDMLLESVNVTTKRVEELLEKINNNTI--KTDGPIRVEDHFTALNLRCIERLY 623
            ED R+E D+ +  +  T +R+E + E++       +    +RV   F+ L++  +  ++
Sbjct: 245 LEDTRYEWDLRIGRLEATLRRLEHITEQLTMIAPERRQFATVRV-SAFSQLDVTILRTIF 303

Query: 624 GDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHR 682
           G     V+  +  +   ++P +   +  K ++W   R      W +  + ++  ++D +
Sbjct: 304 GQDAEQVVSSICLSPLASIPTVHDTMVAKLKQWRAMRYFLQLGWTQQEAPHWAGAVDFK 362


>gi|393235881|gb|EJD43433.1| PAH2 domain-containing protein [Auricularia delicata TFB-10046 SS5]
          Length = 151

 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/68 (41%), Positives = 41/68 (60%)

Query: 47  DALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNT 106
           DAL+YL  VK  + ++   Y+ FL++MK F+ + ++   VI RV  LF  H  LI GF+ 
Sbjct: 48  DALSYLDTVKKTYSERPSVYNQFLDIMKQFQRKELNAPDVIERVIVLFADHLSLIEGFSM 107

Query: 107 FLPKGYEI 114
           FLP  Y +
Sbjct: 108 FLPDCYHL 115



 Score = 50.1 bits (118), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 22/72 (30%), Positives = 42/72 (58%)

Query: 133 EAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTH 192
           +A+++++ +K  +     VY  FLDI+  ++++  +  +V + V  LF DH  L+E F+ 
Sbjct: 48  DALSYLDTVKKTYSERPSVYNQFLDIMKQFQRKELNAPDVIERVIVLFADHLSLIEGFSM 107

Query: 193 FLPDSSGAASIH 204
           FLPD    A+ +
Sbjct: 108 FLPDCYHLATWY 119


>gi|224124422|ref|XP_002330019.1| hypothetical protein POPTRDRAFT_581651 [Populus trichocarpa]
 gi|222871444|gb|EEF08575.1| hypothetical protein POPTRDRAFT_581651 [Populus trichocarpa]
          Length = 87

 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/72 (44%), Positives = 44/72 (61%), Gaps = 2/72 (2%)

Query: 132 EEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFT 191
           EEA++FV K++ R   +   YK FL  L  YR + K + +VY++V  LF D+PDLLE F 
Sbjct: 11  EEAVDFVRKVQKRINKE--AYKDFLMTLCAYRNKCKDVADVYRDVVELFADYPDLLEGFH 68

Query: 192 HFLPDSSGAASI 203
            FLP S   A +
Sbjct: 69  RFLPTSEVIADL 80


>gi|123499668|ref|XP_001327676.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|121910608|gb|EAY15453.1| conserved hypothetical protein [Trichomonas vaginalis G3]
          Length = 742

 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/179 (28%), Positives = 87/179 (48%), Gaps = 8/179 (4%)

Query: 511 SYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDR 570
           SY LL ++ +    S R     EVLND W +  +G  D  F  +RKNQYEE LF  ED+R
Sbjct: 214 SYGLLVRSLVNCKCSGRHVKDFEVLNDRWATGAAGL-DVIFCAVRKNQYEERLFMNEDER 272

Query: 571 FELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVED------HFTALNLRCIERLYG 624
            ELD+ +  +  T + +  L   +++   +    I +++      + T L++  I  ++G
Sbjct: 273 IELDVRISRMRNTMQHLYTLYTALSDPNSQEAKDIVIDEKTFPKYNLTELDMYTISEIFG 332

Query: 625 -DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHR 682
            D   +  D +R+     LP+I T +++K       R      + ++  +N  +SLD R
Sbjct: 333 YDRLEEFSDRIRRKPLEILPIIRTEIEEKITSLTEFRRSKEAEYYDLNKRNSRRSLDVR 391


>gi|297831180|ref|XP_002883472.1| hypothetical protein ARALYDRAFT_898937 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297329312|gb|EFH59731.1| hypothetical protein ARALYDRAFT_898937 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 295

 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 89/192 (46%), Gaps = 25/192 (13%)

Query: 490 DKYLAKPIQELDLSN-CERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSED 548
           D  + +P+++   S   E+ TP+Y+ L +    P ++        VLN+  V +      
Sbjct: 119 DGTIERPLKKRRTSKRLEQVTPNYKPLLEEEQWPVSNT-------VLNNKCVLMKKS--- 168

Query: 549 YSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVE 608
             F+  +    EE + +CED  +E+DML+E++       E+++           G + +E
Sbjct: 169 VKFEDKKLTGIEEEMKKCEDHMYEVDMLMEALRSAVDSAEKVM----------TGEMELE 218

Query: 609 DHFTALNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWA 668
           D       RC+E LYG    D+ +++ ++   ALPVI+ RL QK  +    R     +W 
Sbjct: 219 D-LGGKFYRCVEMLYGG---DMFEIVTEDHQRALPVIIRRLNQKMRDLTAARERLKPIWK 274

Query: 669 EIYSKNYHKSLD 680
           ++  +N  K  D
Sbjct: 275 KLIEENSAKQRD 286


>gi|47204887|emb|CAF92455.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 572

 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/133 (33%), Positives = 64/133 (48%), Gaps = 10/133 (7%)

Query: 649 LKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISE 708
           LK K EEW   +  FNK+W E   K Y KSLDH+   FKQ D+K L +K L  EI+ + +
Sbjct: 1   LKMKDEEWREAQKGFNKIWREQNEKYYLKSLDHQGINFKQNDTKVLRSKTLLNEIEMLYD 60

Query: 709 --KKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLIKYSCGEMCTTEQLD--K 764
             ++R  ++       G      PH+   Y D  I ED   LI +        ++ D  K
Sbjct: 61  DRQERASEETSTPPPTG------PHMNLPYEDSQILEDAAALIIHHVKRQVGIQKEDKYK 114

Query: 765 VMKIWTTFLEPML 777
           + +I   F+  +L
Sbjct: 115 IKQIIHHFIPDLL 127


>gi|195659087|gb|ACG49011.1| paired amphipathic helix repeat family protein [Zea mays]
 gi|413917117|gb|AFW57049.1| paired amphipathic helix repeat family protein [Zea mays]
          Length = 108

 Score = 61.6 bits (148), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/112 (31%), Positives = 56/112 (50%), Gaps = 22/112 (19%)

Query: 1   MKRSRDEVYMNSQIKRPMISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQ 60
           +KRSR  V M  +++ P  +                       T  D L+++ ++K +F 
Sbjct: 7   LKRSRHGVSMKLRVRDPRPTQ----------------------TVQDGLSFVASLKRVFA 44

Query: 61  DKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGY 112
            + +KYD+ +  M+ FK+  I +A V+ RVK L +GH  L+  FN FLP GY
Sbjct: 45  CEPDKYDEIIATMRQFKSGSIRSAVVVERVKVLLEGHPGLLRHFNQFLPWGY 96



 Score = 40.8 bits (94), Expect = 3.6,   Method: Composition-based stats.
 Identities = 23/95 (24%), Positives = 45/95 (47%), Gaps = 3/95 (3%)

Query: 102 LGFNTFLPKG-YEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILN 160
           +GF + L +  + +++ L    P P + V+  + ++FV  +K  F  +   Y   +  + 
Sbjct: 1   MGFTSKLKRSRHGVSMKLRVRDPRPTQTVQ--DGLSFVASLKRVFACEPDKYDEIIATMR 58

Query: 161 MYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLP 195
            ++  +     V + V+ L + HP LL  F  FLP
Sbjct: 59  QFKSGSIRSAVVVERVKVLLEGHPGLLRHFNQFLP 93


>gi|168067269|ref|XP_001785545.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162662851|gb|EDQ49655.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 264

 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 42/119 (35%), Positives = 63/119 (52%), Gaps = 17/119 (14%)

Query: 64  EKYDDFLEVMKDFKAQRIDT----------AGVIARVKELFK---GHRDLILGFNTFLPK 110
           E  D FL+VM+D + + ID             V  R+K+LF     H  LI GFN FL +
Sbjct: 13  ESLDTFLKVMRDLR-RYIDVNDRNIYVLVEPVVSHRMKDLFTRHPQHLQLISGFNMFLQQ 71

Query: 111 GYEITLPLEDE-QPPPKKP--VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKEN 166
           G+EI LPL+++ QP    P    ++E I FVNK+      D  ++K  ++++  +R EN
Sbjct: 72  GFEIPLPLQEKNQPEVYFPDWYRYDEGIKFVNKVIALSASDTSLHKELMELITSFRPEN 130


>gi|242080955|ref|XP_002445246.1| hypothetical protein SORBIDRAFT_07g006830 [Sorghum bicolor]
 gi|241941596|gb|EES14741.1| hypothetical protein SORBIDRAFT_07g006830 [Sorghum bicolor]
          Length = 110

 Score = 60.8 bits (146), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 34/81 (41%), Positives = 52/81 (64%), Gaps = 4/81 (4%)

Query: 40  AQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRD 99
           A   T NDA+ +++AVK  F   R KY +FL++++  +   I  +G++ RVK LF+GH D
Sbjct: 34  ATAATWNDAVDFVQAVKHTFD--RAKYLEFLDIVR--QVDSIGISGIVDRVKVLFRGHPD 89

Query: 100 LILGFNTFLPKGYEITLPLED 120
           L   FN FLP+ YE++L  +D
Sbjct: 90  LKSYFNMFLPEQYELSLTDDD 110



 Score = 40.0 bits (92), Expect = 7.6,   Method: Composition-based stats.
 Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 4/66 (6%)

Query: 131 FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEF 190
           + +A++FV  +K  F  D   Y  FLDI+   + ++  I+ +   V+ LF+ HPDL   F
Sbjct: 39  WNDAVDFVQAVKHTF--DRAKYLEFLDIVR--QVDSIGISGIVDRVKVLFRGHPDLKSYF 94

Query: 191 THFLPD 196
             FLP+
Sbjct: 95  NMFLPE 100


>gi|357508409|ref|XP_003624493.1| Paired amphipathic helix protein Sin3 [Medicago truncatula]
 gi|355499508|gb|AES80711.1| Paired amphipathic helix protein Sin3 [Medicago truncatula]
          Length = 432

 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 30/54 (55%), Positives = 38/54 (70%), Gaps = 2/54 (3%)

Query: 60  QDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFL--PKG 111
            D   KYD+FL+++KDFKA+ ID  GV ARV+EL +G+  LI  FNTFL  P G
Sbjct: 27  HDNMLKYDEFLKLIKDFKAEIIDIRGVQARVRELLQGYPGLIFRFNTFLIIPTG 80


>gi|357486325|ref|XP_003613450.1| Histone deacetylase complex SIN3 component [Medicago truncatula]
 gi|355514785|gb|AES96408.1| Histone deacetylase complex SIN3 component [Medicago truncatula]
          Length = 87

 Score = 59.7 bits (143), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 30/69 (43%), Positives = 45/69 (65%), Gaps = 2/69 (2%)

Query: 129 VEFEEAINFVNKIKTRFQGDDH--VYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDL 186
           V++    N+V ++K RFQ  DH  VY SFL++L+ Y +  K++  V  EV  LF+ H DL
Sbjct: 16  VDYRYISNYVREVKNRFQHADHRHVYLSFLEMLSKYIEREKTVGNVISEVAVLFEGHDDL 75

Query: 187 LEEFTHFLP 195
           +E FT+F+P
Sbjct: 76  IEGFTNFIP 84



 Score = 47.0 bits (110), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 35/61 (57%), Gaps = 2/61 (3%)

Query: 51  YLKAVKDIFQ--DKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFL 108
           Y++ VK+ FQ  D R  Y  FLE++  +  +      VI+ V  LF+GH DLI GF  F+
Sbjct: 24  YVREVKNRFQHADHRHVYLSFLEMLSKYIEREKTVGNVISEVAVLFEGHDDLIEGFTNFI 83

Query: 109 P 109
           P
Sbjct: 84  P 84


>gi|393235879|gb|EJD43431.1| hypothetical protein AURDEDRAFT_167513 [Auricularia delicata
           TFB-10046 SS5]
          Length = 137

 Score = 58.9 bits (141), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/130 (28%), Positives = 65/130 (50%), Gaps = 15/130 (11%)

Query: 80  RIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLEDEQ--------PPPKKPVEF 131
           RI     IA V  L  G+ + I GFN FLP   +I   +   +        PPP +  E 
Sbjct: 4   RIRETESIALVAVLMDGYPEFIRGFNAFLPADSQIKCSMPSNEAAAELRVAPPPVETDEL 63

Query: 132 EE------AINFVNKIKTRFQGDDHVYKSFLDILNMYRK-ENKSITEVYQEVEALFQDHP 184
            E      A++FV ++K+ ++ +  VY  FL +L +Y++ +   I  +  ++  +F+++ 
Sbjct: 64  REERTLSVALSFVTRVKSFYESEPAVYTHFLRLLQLYQQAKGPEIRVLLDQLAFIFRENE 123

Query: 185 DLLEEFTHFL 194
           DL+EE   F+
Sbjct: 124 DLVEELKQFI 133


>gi|340707311|pdb|2LD7|B Chain B, Solution Structure Of The Msin3a Pah3-Sap30 Sid Complex
          Length = 75

 Score = 58.5 bits (140), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/73 (41%), Positives = 44/73 (60%), Gaps = 2/73 (2%)

Query: 343 NAMKSMFSQELSFCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPD 400
           NA K     E  F +KV+  LR  + Y+ FLRCL ++ +E+I+R+EL  LV   LG++P+
Sbjct: 2   NASKHGVGTESLFFDKVRKALRSAEAYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPE 61

Query: 401 LMDGFNGFLARCE 413
           L + F  FL   E
Sbjct: 62  LFNWFKNFLGYKE 74


>gi|224003537|ref|XP_002291440.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220973216|gb|EED91547.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 1360

 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 40/63 (63%)

Query: 48  ALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTF 107
           A  Y+  VK        +Y  FL ++K++++Q+I +  VI R+ ELF+GH  L+LGF+ F
Sbjct: 12  ARTYITTVKRTLGPTSPRYRAFLGLLKNYQSQQITSRDVIERISELFRGHYGLMLGFSVF 71

Query: 108 LPK 110
           +P+
Sbjct: 72  VPR 74


>gi|422296048|gb|EKU23347.1| transcriptional repressor sin3p, partial [Nannochloropsis gaditana
           CCMP526]
          Length = 364

 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 44/90 (48%)

Query: 47  DALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNT 106
           +AL YL+ V+  F  + + Y  FL VM++ K  R DT  +  +V  LF+G   L+ GF  
Sbjct: 153 NALVYLELVQRTFAHQPDIYASFLSVMREHKEGRRDTPNLCGQVSRLFQGQDSLLRGFQD 212

Query: 107 FLPKGYEITLPLEDEQPPPKKPVEFEEAIN 136
           FL   + +  PL    P    P  F  ++ 
Sbjct: 213 FLSGIHAVDPPLPSPAPSVPGPASFPHSMG 242


>gi|393226536|gb|EJD34279.1| hypothetical protein AURDEDRAFT_176672 [Auricularia delicata
           TFB-10046 SS5]
          Length = 215

 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 50/188 (26%), Positives = 81/188 (43%), Gaps = 41/188 (21%)

Query: 3   RSRDEVYMNSQIKRPMISSRGEPSGQTQVVGGGGGGGAQKL-----TTNDALAYLKAVKD 57
           RS+ EV   S     +  S G  +G + +   G  G    L     +  DAL YL   K 
Sbjct: 15  RSKLEVNCESHETENVDQSSGATAGISPL---GDPGHVTSLDHDRPSFEDALRYLVDAKR 71

Query: 58  IFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLP 117
                   Y++F+++++++KA  +DT  VI RV ++F  + DL  GF  FLP+G  + + 
Sbjct: 72  QLCCDPSIYEEFVQILREYKADVLDTGDVIERVWQIFDPYPDLKEGFRKFLPRGCPVDIA 131

Query: 118 LEDEQ---PP---------------------------PKKPVEFEEAINFVNKIKTRFQG 147
           + D     PP                           P+  V F+ A+ FVN +K+    
Sbjct: 132 MHDMHDIYPPNDAYSTSYSQMLVQKLTPLSGIARGLAPETQVPFDSALAFVNMLKSE--- 188

Query: 148 DDHVYKSF 155
           D  +Y++F
Sbjct: 189 DPVMYEAF 196



 Score = 43.1 bits (100), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 35/65 (53%)

Query: 131 FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEF 190
           FE+A+ ++   K +   D  +Y+ F+ IL  Y+ +     +V + V  +F  +PDL E F
Sbjct: 59  FEDALRYLVDAKRQLCCDPSIYEEFVQILREYKADVLDTGDVIERVWQIFDPYPDLKEGF 118

Query: 191 THFLP 195
             FLP
Sbjct: 119 RKFLP 123


>gi|357444325|ref|XP_003592440.1| SIN3 component histone deacetylase complex [Medicago truncatula]
 gi|355481488|gb|AES62691.1| SIN3 component histone deacetylase complex [Medicago truncatula]
          Length = 83

 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 4/77 (5%)

Query: 70  LEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLEDEQPPPKKPV 129
           ++++ DF A+RID   V   V ELFK H+DLI  F+ FL  G+EI+ PL+++Q   +   
Sbjct: 1   MKLLHDFGAKRIDKRVVKEGVMELFKEHQDLISRFSIFLQPGHEISFPLDNDQHVQRG-- 58

Query: 130 EFEEAINFVNKIKTRFQ 146
             +EA++ V  +K  FQ
Sbjct: 59  --DEAMSLVTAVKVAFQ 73


>gi|115468172|ref|NP_001057685.1| Os06g0494000 [Oryza sativa Japonica Group]
 gi|52077415|dbj|BAD46525.1| unknown protein [Oryza sativa Japonica Group]
 gi|113595725|dbj|BAF19599.1| Os06g0494000 [Oryza sativa Japonica Group]
 gi|215740566|dbj|BAG97222.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 115

 Score = 56.6 bits (135), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 32/69 (46%), Positives = 42/69 (60%), Gaps = 6/69 (8%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDL 186
           +PV FEE++ FV K+K R   D  +Y S LD+L+  R E   + E Y E+  LF+DH DL
Sbjct: 13  EPVTFEESLCFVKKVKAR---DYVLYLSLLDVLS--RNEQIPL-EAYSELSLLFRDHDDL 66

Query: 187 LEEFTHFLP 195
           LEE   F P
Sbjct: 67  LEELAKFRP 75


>gi|125555426|gb|EAZ01032.1| hypothetical protein OsI_23066 [Oryza sativa Indica Group]
 gi|222635624|gb|EEE65756.1| hypothetical protein OsJ_21425 [Oryza sativa Japonica Group]
          Length = 107

 Score = 56.6 bits (135), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 32/69 (46%), Positives = 42/69 (60%), Gaps = 6/69 (8%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDL 186
           +PV FEE++ FV K+K R   D  +Y S LD+L+  R E   + E Y E+  LF+DH DL
Sbjct: 5   EPVTFEESLCFVKKVKAR---DYVLYLSLLDVLS--RNEQIPL-EAYSELSLLFRDHDDL 58

Query: 187 LEEFTHFLP 195
           LEE   F P
Sbjct: 59  LEELAKFRP 67


>gi|443917658|gb|ELU38325.1| PAH domain-containing protein [Rhizoctonia solani AG-1 IA]
          Length = 509

 Score = 56.2 bits (134), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 69/147 (46%), Gaps = 33/147 (22%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQ-----------------RIDTAG 85
           +  ++AL ++  V+  F ++   YD F+ V+ +++ Q                 RID   
Sbjct: 1   MQYDNALDFISTVRHTFTNEPWVYDAFVVVLSEYRKQQSVHCLTCTCSPANPPCRIDIDD 60

Query: 86  VIARVKELFKGHRDLILGFNTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRF 145
           ++  ++ +F  H DL   F +FLP         +D+QP          A++FV+ +K+R 
Sbjct: 61  LMTHMRAIFSSHDDLFDHFCSFLPD--------QDQQP------CCPSALDFVSYVKSR- 105

Query: 146 QGDDHVYKSFLDILNMYRKENKSITEV 172
               H+Y +FL +LN   +   +++EV
Sbjct: 106 -SAPHLYSAFLSLLNEVERGEVAVSEV 131



 Score = 45.8 bits (107), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 21/85 (24%), Positives = 42/85 (49%), Gaps = 17/85 (20%)

Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENK-----------------SITE 171
           ++++ A++F++ ++  F  +  VY +F+ +L+ YRK+                    I +
Sbjct: 1   MQYDNALDFISTVRHTFTNEPWVYDAFVVVLSEYRKQQSVHCLTCTCSPANPPCRIDIDD 60

Query: 172 VYQEVEALFQDHPDLLEEFTHFLPD 196
           +   + A+F  H DL + F  FLPD
Sbjct: 61  LMTHMRAIFSSHDDLFDHFCSFLPD 85


>gi|296827546|ref|XP_002851186.1| hypothetical protein MCYG_01290 [Arthroderma otae CBS 113480]
 gi|238838740|gb|EEQ28402.1| hypothetical protein MCYG_01290 [Arthroderma otae CBS 113480]
          Length = 816

 Score = 56.2 bits (134), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 40/67 (59%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
           + T  A  YL  V+  F D+ + Y  FL+++K  K++ ID   V++R+ +LF  +  LI 
Sbjct: 352 IMTQKAYRYLDQVRAQFIDQPDIYSTFLDILKGSKSRVIDIPYVVSRISKLFARYPSLIQ 411

Query: 103 GFNTFLP 109
           GFN FLP
Sbjct: 412 GFNIFLP 418



 Score = 42.4 bits (98), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 18/64 (28%), Positives = 34/64 (53%)

Query: 132 EEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFT 191
           ++A  ++++++ +F     +Y +FLDIL   +     I  V   +  LF  +P L++ F 
Sbjct: 355 QKAYRYLDQVRAQFIDQPDIYSTFLDILKGSKSRVIDIPYVVSRISKLFARYPSLIQGFN 414

Query: 192 HFLP 195
            FLP
Sbjct: 415 IFLP 418


>gi|260829635|ref|XP_002609767.1| hypothetical protein BRAFLDRAFT_78599 [Branchiostoma floridae]
 gi|229295129|gb|EEN65777.1| hypothetical protein BRAFLDRAFT_78599 [Branchiostoma floridae]
          Length = 2035

 Score = 56.2 bits (134), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/148 (25%), Positives = 68/148 (45%), Gaps = 10/148 (6%)

Query: 51   YLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFL-- 108
            +L+ V+D  +++  KY + L+V      +      +   ++ +      L+  F  FL  
Sbjct: 1135 FLERVRDSLREEEGKYHEVLQVFHQGHQEGRTIVQLYQELQRILARWPGLLGEFAAFLQP 1194

Query: 109  PKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKS 168
             +  E  L +E +        E+ +A +F+ K++  F  +   Y+  L +   Y +E  S
Sbjct: 1195 AEAVECDLFMEHQ--------EYVQARSFLRKLEVFFSDNPDRYQKVLRVFASYMREGAS 1246

Query: 169  ITEVYQEVEALFQDHPDLLEEFTHFLPD 196
            +  + QE+  L Q  P LL+EFT F PD
Sbjct: 1247 LEGLRQEITPLLQGQPYLLQEFTRFFPD 1274



 Score = 42.0 bits (97), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 17/61 (27%), Positives = 34/61 (55%)

Query: 134  AINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHF 193
            A NF+ +++   + ++  Y   L + +   +E ++I ++YQE++ +    P LL EF  F
Sbjct: 1132 AKNFLERVRDSLREEEGKYHEVLQVFHQGHQEGRTIVQLYQELQRILARWPGLLGEFAAF 1191

Query: 194  L 194
            L
Sbjct: 1192 L 1192


>gi|443700295|gb|ELT99328.1| hypothetical protein CAPTEDRAFT_222624 [Capitella teleta]
          Length = 289

 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/176 (24%), Positives = 71/176 (40%), Gaps = 36/176 (20%)

Query: 59  FQDKREKYDDFLEVMKDFKA-----QRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYE 113
           F++    Y  F E+++   A     +R+D   ++ ++  LF GH DL+L  N FLP  Y 
Sbjct: 84  FKNNPAIYRRFGEILQRLPAVSASLERLD---LVKQLITLFDGHPDLVLNMNQFLPNEYC 140

Query: 114 ITL-------------------------PLEDEQPPPKKPVEFEEAINFVNKIKTRFQGD 148
           I +                          + D   P         +I ++  +K  +  D
Sbjct: 141 IEIQHDAVVIKVFEEFGQAGLVDTGHGRSITDPSKPLPSLGTSVPSIAYIMNVKKAYADD 200

Query: 149 DHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIH 204
            +VY +F+ +L  Y  +  +      +V  LF+  PDL+  F  FLP      SIH
Sbjct: 201 PNVYSAFMGVLKHYHSKKANELSTVNQVVGLFRTRPDLVLGFNEFLPP---GFSIH 253



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 42/73 (57%)

Query: 44  TTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILG 103
           T+  ++AY+  VK  + D    Y  F+ V+K + +++ +    + +V  LF+   DL+LG
Sbjct: 182 TSVPSIAYIMNVKKAYADDPNVYSAFMGVLKHYHSKKANELSTVNQVVGLFRTRPDLVLG 241

Query: 104 FNTFLPKGYEITL 116
           FN FLP G+ I +
Sbjct: 242 FNEFLPPGFSIHM 254


>gi|357491187|ref|XP_003615881.1| Paired amphipathic helix protein Sin3 [Medicago truncatula]
 gi|355517216|gb|AES98839.1| Paired amphipathic helix protein Sin3 [Medicago truncatula]
          Length = 194

 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/53 (50%), Positives = 37/53 (69%), Gaps = 2/53 (3%)

Query: 61  DKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFL--PKG 111
           D   KYD+FL++++DFKA RID  GV +RV+ L + H+ L+ GF TFL  P G
Sbjct: 27  DNSIKYDEFLKLIRDFKAGRIDIRGVQSRVRVLLQRHQGLLFGFKTFLIMPAG 79


>gi|302884848|ref|XP_003041318.1| hypothetical protein NECHADRAFT_86789 [Nectria haematococca mpVI
           77-13-4]
 gi|256722218|gb|EEU35605.1| hypothetical protein NECHADRAFT_86789 [Nectria haematococca mpVI
           77-13-4]
          Length = 1450

 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 8/71 (11%)

Query: 133 EAINFVNKIKT--------RFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHP 184
           E + F++K+K         RF+    VY+ F+DIL  ++ E   + +V  ++ ALF+  P
Sbjct: 827 ETVGFLDKVKRSRLIVAKDRFRDKPEVYEEFIDILKTFKFERTPVQDVEAQISALFEPTP 886

Query: 185 DLLEEFTHFLP 195
           DL EEF  FLP
Sbjct: 887 DLWEEFKPFLP 897



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 26/66 (39%), Positives = 37/66 (56%)

Query: 52  LKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKG 111
           L   KD F+DK E Y++F++++K FK +R     V A++  LF+   DL   F  FLPK 
Sbjct: 840 LIVAKDRFRDKPEVYEEFIDILKTFKFERTPVQDVEAQISALFEPTPDLWEEFKPFLPKP 899

Query: 112 YEITLP 117
              T P
Sbjct: 900 APSTEP 905


>gi|15228509|ref|NP_189529.1| uncharacterized protein [Arabidopsis thaliana]
 gi|332643978|gb|AEE77499.1| uncharacterized protein [Arabidopsis thaliana]
          Length = 355

 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 59/121 (48%), Gaps = 14/121 (11%)

Query: 553 HMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFT 612
           H      EE +++ ED+ FE+DML+    V T  VE   E I        G + ++D   
Sbjct: 142 HKNLTDIEEDMYKWEDEMFEVDMLM---RVLTSAVESAKEVIK-------GEMELKD-LG 190

Query: 613 ALNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYS 672
           A   RC+E LYG+   D+ + + ++   ALP+IL+RLKQK       R     +W +   
Sbjct: 191 AKFYRCVEMLYGE---DMFETVTEDHQRALPMILSRLKQKLRHVTTARERLKPLWKQTIE 247

Query: 673 K 673
           K
Sbjct: 248 K 248


>gi|195606268|gb|ACG24964.1| paired amphipathic helix repeat family protein [Zea mays]
          Length = 121

 Score = 55.1 bits (131), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 13/82 (15%)

Query: 44  TTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQR-------------IDTAGVIARV 90
           T  D L+++ ++K +F  + +KYD+ +  M+ FK+ R             I +A V+ RV
Sbjct: 28  TVQDGLSFVASLKRVFACEPDKYDEIIATMRQFKSGRSIDSLFVLSVNCSIRSAVVVERV 87

Query: 91  KELFKGHRDLILGFNTFLPKGY 112
           K L +GH  L+  FN FLP GY
Sbjct: 88  KVLLEGHPGLLRHFNQFLPWGY 109


>gi|226506596|ref|NP_001144999.1| uncharacterized protein LOC100278162 [Zea mays]
 gi|195649807|gb|ACG44371.1| hypothetical protein [Zea mays]
 gi|238006386|gb|ACR34228.1| unknown [Zea mays]
 gi|413953909|gb|AFW86558.1| hypothetical protein ZEAMMB73_799878 [Zea mays]
          Length = 101

 Score = 55.1 bits (131), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/69 (40%), Positives = 42/69 (60%), Gaps = 6/69 (8%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDL 186
           +PV F+E+++FV K+K R   D  +Y S LD+LN   + ++   + Y E+  LFQ H DL
Sbjct: 5   EPVTFQESLSFVKKVKAR---DYMLYISLLDVLN---RNDQIPLQAYSELSLLFQHHEDL 58

Query: 187 LEEFTHFLP 195
           L E + F P
Sbjct: 59  LAELSKFRP 67


>gi|269859826|ref|XP_002649637.1| histone deacetylase complex, SIN3 component [Enterocytozoon
           bieneusi H348]
 gi|220067000|gb|EED44469.1| histone deacetylase complex, SIN3 component [Enterocytozoon
           bieneusi H348]
          Length = 874

 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 2/86 (2%)

Query: 25  PSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTA 84
           PSG        G      LT  DA+ +L  +K+ + D    YD FLE M+DFK  +I++ 
Sbjct: 129 PSGMRYNEARSGQLDDADLT--DAMLFLNKIKEDYTDNIHVYDQFLETMRDFKFGKIESG 186

Query: 85  GVIARVKELFKGHRDLILGFNTFLPK 110
            V  R++ LFK +  LI  F  +LP+
Sbjct: 187 EVCKRIRLLFKDNLHLINLFEEYLPQ 212



 Score = 40.4 bits (93), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 13/107 (12%)

Query: 130 EFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEE 189
           +  +A+ F+NKIK  +  + HVY  FL+ +  ++       EV + +  LF+D+  L+  
Sbjct: 146 DLTDAMLFLNKIKEDYTDNIHVYDQFLETMRDFKFGKIESGEVCKRIRLLFKDNLHLINL 205

Query: 190 FTHFLP-------DSSGAAS-IHYVPSGRNSILRDRSSAMPTARQVH 228
           F  +LP       + SG +S I+++P  +N         MP     H
Sbjct: 206 FEEYLPQHLKLNANKSGYSSQINHIPPHQN-----MHRQMPLGTMYH 247


>gi|429962945|gb|ELA42489.1| hypothetical protein VICG_00588 [Vittaforma corneae ATCC 50505]
          Length = 341

 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 9/81 (11%)

Query: 46  NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFN 105
            DA+ +L  +K+ F D    YD FLE M+DF+ ++ID   V   V+ LFK    LI  F+
Sbjct: 84  TDAMIFLNRIKEEFNDNLHVYDSFLETMRDFRFEKIDAEEVCKAVRILFKDKPHLIRLFD 143

Query: 106 TFLP---------KGYEITLP 117
            +LP         + Y++ +P
Sbjct: 144 EYLPHHLRYSDMSRSYDMQMP 164



 Score = 50.1 bits (118), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 38/66 (57%)

Query: 130 EFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEE 189
           +  +A+ F+N+IK  F  + HVY SFL+ +  +R E     EV + V  LF+D P L+  
Sbjct: 82  DLTDAMIFLNRIKEEFNDNLHVYDSFLETMRDFRFEKIDAEEVCKAVRILFKDKPHLIRL 141

Query: 190 FTHFLP 195
           F  +LP
Sbjct: 142 FDEYLP 147



 Score = 43.5 bits (101), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 3/57 (5%)

Query: 134 AINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEF 190
           A +FV ++K R+     +YK F+D+L   +    S  ++Y +V AL  D PDL+E+F
Sbjct: 250 AHDFVQQVKKRYLNKPLIYKQFVDLL---QNSKNSFEKLYTQVSALLCDSPDLIEKF 303


>gi|422293306|gb|EKU20606.1| transcriptional repressor sin3p, partial [Nannochloropsis gaditana
           CCMP526]
          Length = 292

 Score = 54.7 bits (130), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/89 (32%), Positives = 44/89 (49%)

Query: 47  DALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNT 106
           +AL YL+ V+  F  + + Y  FL VM++ K  R DT  +  +V  LF+G   L+ GF  
Sbjct: 153 NALVYLELVQRTFAHQPDIYASFLSVMREHKEGRRDTPNLCGQVSRLFQGQDSLLRGFQD 212

Query: 107 FLPKGYEITLPLEDEQPPPKKPVEFEEAI 135
           FL   + +  PL    P    P  F  ++
Sbjct: 213 FLSGIHAVDPPLPSPAPSVPGPASFPHSM 241


>gi|9294228|dbj|BAB02130.1| unnamed protein product [Arabidopsis thaliana]
          Length = 317

 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 59/121 (48%), Gaps = 14/121 (11%)

Query: 553 HMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFT 612
           H      EE +++ ED+ FE+DML+    V T  VE   E I        G + ++D   
Sbjct: 146 HKNLTDIEEDMYKWEDEMFEVDMLMR---VLTSAVESAKEVIK-------GEMELKD-LG 194

Query: 613 ALNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYS 672
           A   RC+E LYG+   D+ + + ++   ALP+IL+RLKQK       R     +W +   
Sbjct: 195 AKFYRCVEMLYGE---DMFETVTEDHQRALPMILSRLKQKLRHVTTARERLKPLWKQTIE 251

Query: 673 K 673
           K
Sbjct: 252 K 252


>gi|169845104|ref|XP_001829272.1| hypothetical protein CC1G_06609 [Coprinopsis cinerea okayama7#130]
 gi|116509703|gb|EAU92598.1| hypothetical protein CC1G_06609 [Coprinopsis cinerea okayama7#130]
          Length = 128

 Score = 54.3 bits (129), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/71 (36%), Positives = 43/71 (60%)

Query: 42  KLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLI 101
           +LT  DA+ ++K  K    D+   Y++F+  MK+++ + I+   +I RV+ LF G+ DLI
Sbjct: 41  RLTRQDAIDFMKLAKRRLHDRPRVYNEFVLSMKEWQRRVIERPELIGRVRTLFDGYLDLI 100

Query: 102 LGFNTFLPKGY 112
            GF  F+P  Y
Sbjct: 101 QGFRMFVPPDY 111


>gi|357501041|ref|XP_003620809.1| SIN3 component histone deacetylase complex [Medicago truncatula]
 gi|355495824|gb|AES77027.1| SIN3 component histone deacetylase complex [Medicago truncatula]
          Length = 670

 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 10/82 (12%)

Query: 49  LAYLKAVKDIFQDKREKYDDFLE-------VMKDFKAQRIDTAGVIARVKELFKGHRDLI 101
           L +++ VK +F  KRE+Y++F++       +M D +  R+       R+K+L KGH  LI
Sbjct: 10  LGFVEEVKSVFHGKREEYEEFIKDIDAFKTLMNDHRITRLPVQNFKGRMKKLLKGHNRLI 69

Query: 102 LGFNTFLPKGYEITLPLEDEQP 123
            GFN ++ K   ITLP+   QP
Sbjct: 70  FGFNAYM-KDRRITLPI--RQP 88


>gi|357501191|ref|XP_003620884.1| SIN3 component histone deacetylase complex [Medicago truncatula]
 gi|355495899|gb|AES77102.1| SIN3 component histone deacetylase complex [Medicago truncatula]
          Length = 455

 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 10/82 (12%)

Query: 49  LAYLKAVKDIFQDKREKYDDFLE-------VMKDFKAQRIDTAGVIARVKELFKGHRDLI 101
           L +++ VK +F  KRE+Y++F++       +M D +  R+       R+K+L KGH  LI
Sbjct: 10  LGFVEEVKSVFHGKREEYEEFIKDIDAFKTLMNDHRITRLPVQNFKGRMKKLLKGHNRLI 69

Query: 102 LGFNTFLPKGYEITLPLEDEQP 123
            GFN ++ K   ITLP+   QP
Sbjct: 70  FGFNAYM-KDRRITLPI--RQP 88


>gi|357501231|ref|XP_003620904.1| SIN3 component histone deacetylase complex [Medicago truncatula]
 gi|355495919|gb|AES77122.1| SIN3 component histone deacetylase complex [Medicago truncatula]
          Length = 677

 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 10/82 (12%)

Query: 49  LAYLKAVKDIFQDKREKYDDFLE-------VMKDFKAQRIDTAGVIARVKELFKGHRDLI 101
           L +++ VK +F  KRE+Y++F++       +M D +  R+       R+K+L KGH  LI
Sbjct: 10  LGFVEEVKSVFHGKREEYEEFIKDIDAFKTLMNDHRITRLPVQNFKGRMKKLLKGHNRLI 69

Query: 102 LGFNTFLPKGYEITLPLEDEQP 123
            GFN ++ K   ITLP+   QP
Sbjct: 70  FGFNAYM-KDRRITLPI--RQP 88


>gi|357444425|ref|XP_003592490.1| Histone deacetylase complex SIN3 component [Medicago truncatula]
 gi|355481538|gb|AES62741.1| Histone deacetylase complex SIN3 component [Medicago truncatula]
          Length = 59

 Score = 53.5 bits (127), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 24/32 (75%), Positives = 27/32 (84%)

Query: 66 YDDFLEVMKDFKAQRIDTAGVIARVKELFKGH 97
          YD+FL+VM DF+AQRIDT GV  R KELFKGH
Sbjct: 16 YDEFLKVMMDFQAQRIDTRGVTTRAKELFKGH 47


>gi|355690645|gb|AER99222.1| gon-4-like protein [Mustela putorius furo]
          Length = 945

 Score = 53.1 bits (126), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 71/150 (47%), Gaps = 9/150 (6%)

Query: 48  ALAYLKAVKDIFQDKREKYDDFLEVMKDFKA--QRIDTAGVIARVKELFKGHRDLILGFN 105
           A AYL  V++  Q    KY+DFL+V+ +F++  QR    G+   ++ L +    L+  F 
Sbjct: 700 AQAYLTRVREALQHIPGKYEDFLQVIHEFESGTQRQTAVGLYRSLQALLQDWPQLLRDFA 759

Query: 106 TFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRK- 164
            FL     +   L +EQ        FE++  F+ +++  F  +   ++  + +L      
Sbjct: 760 AFLLPEQALACGLFEEQ------QAFEKSRKFLRQLEICFAENPSHHQKIIKVLQSCADC 813

Query: 165 ENKSITEVYQEVEALFQDHPDLLEEFTHFL 194
             + ITE+  ++  L + H  L EEF+ F 
Sbjct: 814 LPQEITELKTQMWQLLKGHDHLQEEFSVFF 843


>gi|297822239|ref|XP_002879002.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297324841|gb|EFH55261.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 586

 Score = 53.1 bits (126), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 26/54 (48%), Positives = 39/54 (72%), Gaps = 2/54 (3%)

Query: 463 REKDRLDKSVAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLP 516
           R  DR+ KS+    KD+G + ++ S+ + +LAK I ELDL+NC +C+PSY+LLP
Sbjct: 313 RGHDRV-KSITTFGKDIGSRNNLLSTTN-HLAKAINELDLANCAQCSPSYQLLP 364


>gi|339232744|ref|XP_003381489.1| paired amphipathic helix repeat family protein [Trichinella
           spiralis]
 gi|316979702|gb|EFV62457.1| paired amphipathic helix repeat family protein [Trichinella
           spiralis]
          Length = 1486

 Score = 52.8 bits (125), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 30/110 (27%), Positives = 55/110 (50%), Gaps = 16/110 (14%)

Query: 137 FVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI---------------TEVYQEVEALFQ 181
            ++K + R+     VY+ F+ +LN YR+ + SI               T+VY  +  +F 
Sbjct: 316 IIHKSEQRYVHKQKVYQEFIFVLNFYREYSPSIRDKYMPKVLDRGRIETKVYSMLSKIFS 375

Query: 182 DHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRS-SAMPTARQVHVD 230
           D PDLL EF  FLP +   A +  + S + + + +++ S    +R +H++
Sbjct: 376 DSPDLLTEFISFLPSTIATAKVQNLNSAQKASVSEQTGSGTSKSRNIHLE 425



 Score = 43.1 bits (100), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 49/224 (21%), Positives = 89/224 (39%), Gaps = 35/224 (15%)

Query: 496 PIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMR 555
           P+Q + +   +     Y  LP+ Y+I    QR  +  EVLN    S +  S        +
Sbjct: 755 PLQSVAVDEVKMLEEVYFFLPEAYMI----QRKSINGEVLNYQCFSNSPHSGQNIATPAQ 810

Query: 556 KNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTD----GPIRVEDHF 611
            + +E+     E + + LD ++  +N +T      L  + ++ IK        ++++D  
Sbjct: 811 ADVFEQ-----EKELYILDYII-GINCSTLNT---LSNVWDSIIKLKRSEAKAVQLDDRL 861

Query: 612 ----TALNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVW 667
                ++  R   R+YG    D+++ L       +P +L   K K EEW   R+  +  W
Sbjct: 862 GGNSVSIPARAFRRMYGKLADDLIEGLTMTPYYCIPSVLKDFKDKTEEWVAARAALHLEW 921

Query: 668 AEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKR 711
                         R    +Q DS+ L       EI++I +  R
Sbjct: 922 --------------RDESQRQTDSERLRVSTFIKEIQKICKSVR 951


>gi|326676697|ref|XP_003200651.1| PREDICTED: si:dkey-27c15.3 [Danio rerio]
          Length = 1593

 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/152 (26%), Positives = 76/152 (50%), Gaps = 13/152 (8%)

Query: 48   ALAYLKAVKDIFQDKREKYDDFLEVMKDF--KAQRIDTAGVIARVKELFKGHRDLILGFN 105
            A AYL+ V ++      K D+FL ++ DF    +   +  ++ R+K + +   +L+  F 
Sbjct: 1278 AQAYLEKVYEVLHQVPGKVDEFLCILSDFVKNPESHTSLQLLMRLKPILEDWPELLQDFA 1337

Query: 106  TFL-P-KGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYR 163
             FL P +  E  L L ++Q        FE +  F+ ++++ F    ++Y+  + IL   +
Sbjct: 1338 AFLHPDQARECGL-LAEQQ-------AFERSRGFLRQLESTFGEQSYLYRKVVHILQGDQ 1389

Query: 164  KENKS-ITEVYQEVEALFQDHPDLLEEFTHFL 194
             +  + + E+  E+  L +DH DLLEEF  + 
Sbjct: 1390 SQGLADLKEIKAEMALLLRDHTDLLEEFWEYF 1421


>gi|357443891|ref|XP_003592223.1| SIN3 component histone deacetylase complex [Medicago truncatula]
 gi|355481271|gb|AES62474.1| SIN3 component histone deacetylase complex [Medicago truncatula]
          Length = 127

 Score = 52.8 bits (125), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/79 (43%), Positives = 46/79 (58%), Gaps = 6/79 (7%)

Query: 49  LAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAG-----VIARVKELFKGHRDLILG 103
           L + + VK  F+  R K D F +++K  +A R DT       + A VK L KGH +LILG
Sbjct: 26  LFFWEEVKVAFEYNRIKCDQFSKLLKLLQAGR-DTHPKKFNFIKAIVKGLLKGHANLILG 84

Query: 104 FNTFLPKGYEITLPLEDEQ 122
           FN FLPK ++ITL   D +
Sbjct: 85  FNAFLPKEHQITLHTTDRR 103


>gi|414876650|tpg|DAA53781.1| TPA: hypothetical protein ZEAMMB73_352275 [Zea mays]
 gi|414876651|tpg|DAA53782.1| TPA: hypothetical protein ZEAMMB73_352275 [Zea mays]
 gi|414876652|tpg|DAA53783.1| TPA: hypothetical protein ZEAMMB73_352275 [Zea mays]
          Length = 137

 Score = 52.0 bits (123), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/109 (30%), Positives = 50/109 (45%), Gaps = 21/109 (19%)

Query: 87  IARVKELFKGHRDLILGFNTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQ 146
           + R  E+F+    +++ F     K  ++T               FEE + FV K+K R  
Sbjct: 1   MPRANEMFRADSRMMVVFGALTSKPEQLT---------------FEETLRFVKKVKAR-- 43

Query: 147 GDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLP 195
            D  +Y S  DIL    +   S  + Y+E++ LF +HPDL EE   F P
Sbjct: 44  -DYMLYLSLFDILG---RMELSQLDAYRELQLLFGNHPDLCEELEKFRP 88


>gi|255558810|ref|XP_002520428.1| conserved hypothetical protein [Ricinus communis]
 gi|223540270|gb|EEF41841.1| conserved hypothetical protein [Ricinus communis]
          Length = 252

 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 81/169 (47%), Gaps = 15/169 (8%)

Query: 504 NCERCTPSYRLLPKNYLIPSASQRTELGAEVLN-DHWVSVTS-GSEDYSFKHMRKNQYEE 561
           +C R  PSYR  P      + S RT   + VL+ D  VSV      + S K +R +Q++E
Sbjct: 97  DCSR-NPSYRWPPCK---DNGSNRTGHESGVLSSDCCVSVPPREGNNRSRKKIRIDQHQE 152

Query: 562 SLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFTALNLRCIER 621
            + + +DDR E+D L+  +    K  + L    ++N    +G  R   HF    + C+E 
Sbjct: 153 VINKRDDDRDEVDTLMLWLRSAVKYAKIL---SSSNAKAEEGFSRT--HF----ISCVEH 203

Query: 622 LYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEI 670
           +YG+    +++   K    A+  +L RL QK +E    ++   K+W  I
Sbjct: 204 MYGNEASVILEFCEKKDPCAVGAVLVRLNQKIQELTEFKAQMQKIWISI 252



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 40/62 (64%), Gaps = 1/62 (1%)

Query: 353 LSFCEKVKDKL-RDDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLAR 411
           L+F + V+ K+ ++ Y EFL   + YT+E I +S+L+  V  ++G+YPDL+  F  FL  
Sbjct: 9   LTFFQHVRAKMSKESYFEFLNHFYSYTREKIGKSDLEHAVTAMIGQYPDLLADFFRFLNI 68

Query: 412 CE 413
           CE
Sbjct: 69  CE 70


>gi|242052365|ref|XP_002455328.1| hypothetical protein SORBIDRAFT_03g008480 [Sorghum bicolor]
 gi|241927303|gb|EES00448.1| hypothetical protein SORBIDRAFT_03g008480 [Sorghum bicolor]
          Length = 137

 Score = 51.6 bits (122), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/109 (29%), Positives = 51/109 (46%), Gaps = 21/109 (19%)

Query: 87  IARVKELFKGHRDLILGFNTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQ 146
           + R  E+ +    +++ F     K  ++T               FE+++ FV K+K R  
Sbjct: 1   MPRANEMLRADSRMMVVFGALTSKPEQLT---------------FEDSLRFVKKVKAR-- 43

Query: 147 GDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLP 195
            D  +Y S  DIL    +   S  + Y+E++ LFQ+HPDL EE   F P
Sbjct: 44  -DYMLYLSLFDILG---RMELSQLDAYRELQLLFQNHPDLCEELEKFRP 88


>gi|125540424|gb|EAY86819.1| hypothetical protein OsI_08197 [Oryza sativa Indica Group]
          Length = 418

 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 74/160 (46%), Gaps = 12/160 (7%)

Query: 45  TNDALAYLKAVKDIFQDKREKYDDFLEVMKDF-KAQRIDTAGVIARVKELFKGHRDLILG 103
           T  ALA+L+ V+  F  K   Y     ++ ++ K     T+ V+     L   H DLI  
Sbjct: 14  TRAALAFLRKVRSRFWLKPCVYKGLETILTEYGKYANASTSLVVDGAAALLGDHPDLIAE 73

Query: 104 FNTFLPKGYEITLPLE------DEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVY-KSFL 156
           FNTF+   Y+I LP +        +P  K  V   EA  F+ ++K     D+ +Y +  +
Sbjct: 74  FNTFVRPEYKIELPADHLPAAATAKPQGKGDVSPLEAKRFLERVKAE---DEKLYDRVVV 130

Query: 157 DILNMYRKENKSITEVYQEVEALF-QDHPDLLEEFTHFLP 195
            + ++++K      +VY ++E +F     DLL     FLP
Sbjct: 131 KLSDLHKKRWMDAHQVYAQLEKVFGPARRDLLRCSAEFLP 170


>gi|443706547|gb|ELU02535.1| hypothetical protein CAPTEDRAFT_196712 [Capitella teleta]
          Length = 535

 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 1/66 (1%)

Query: 48  ALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQR-IDTAGVIARVKELFKGHRDLILGFNT 106
           A+ Y   VK +F DKRE + +FLE+    ++ R I  A  + RV ELF G+  L+  F  
Sbjct: 451 AVGYTNVVKCVFADKREVFLEFLEIFTGIRSGRNIKYAEAMLRVTELFDGYPHLVKHFER 510

Query: 107 FLPKGY 112
           FLP  Y
Sbjct: 511 FLPSDY 516


>gi|49387965|dbj|BAD25073.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|125582993|gb|EAZ23924.1| hypothetical protein OsJ_07646 [Oryza sativa Japonica Group]
          Length = 421

 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 74/160 (46%), Gaps = 12/160 (7%)

Query: 45  TNDALAYLKAVKDIFQDKREKYDDFLEVMKDF-KAQRIDTAGVIARVKELFKGHRDLILG 103
           T  ALA+L+ V+  F  K   Y     ++ ++ K     T+ V+     L   H DLI  
Sbjct: 14  TRAALAFLRKVRSRFWLKPCVYKGLETILTEYGKYANASTSLVVDGAAVLLGDHPDLIAE 73

Query: 104 FNTFLPKGYEITLPLE------DEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVY-KSFL 156
           FNTF+   Y+I LP +        +P  K  V   EA  F+ ++K     D+ +Y +  +
Sbjct: 74  FNTFVRPEYKIELPADHLPAAATAKPQGKGDVSPLEAKRFLERVKAE---DEKLYDRVVV 130

Query: 157 DILNMYRKENKSITEVYQEVEALF-QDHPDLLEEFTHFLP 195
            + ++++K      +VY ++E +F     DLL     FLP
Sbjct: 131 KLSDLHKKRWMDAHQVYAQLEKVFGPARRDLLRCSAEFLP 170


>gi|46123133|ref|XP_386120.1| hypothetical protein FG05944.1 [Gibberella zeae PH-1]
          Length = 881

 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 60/121 (49%), Gaps = 21/121 (17%)

Query: 51  YLKAVKDIFQDKREKYDDFLEVMKDFKAQ--RIDTAGVIARVKELFKG--HRDL---ILG 103
           Y++ VK  F D+   Y  FL+++ D+ +   R+D   V+  V++LF G  H +L   ++G
Sbjct: 461 YVEEVKVAFLDRPHVYRRFLDILSDYNSNVLRLDLKSVVHEVRDLFVGTNHENLSSMMVG 520

Query: 104 FNTFLPKGYEI----TLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDIL 159
           F+ FLP G+ I     L   D+  PP +          ++  + R  G D V  ++L  L
Sbjct: 521 FSRFLPSGFFIDSDFNLRFPDDATPPDE----------LDASEIRPTGGDAVLIAYLKYL 570

Query: 160 N 160
           N
Sbjct: 571 N 571


>gi|115898574|ref|XP_783309.2| PREDICTED: uncharacterized protein LOC578026 [Strongylocentrotus
            purpuratus]
          Length = 2553

 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 1/75 (1%)

Query: 122  QPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKE-NKSITEVYQEVEALF 180
            Q P K+  E   A +F++++K     +   Y++FL + N Y ++ N SI  +Y  V+ + 
Sbjct: 1798 QDPYKEEREMAFAKDFLDRVKEALHDNLDQYRNFLRVFNEYSEDPNSSIANLYYAVKYVL 1857

Query: 181  QDHPDLLEEFTHFLP 195
             + PDL+EEFT F+P
Sbjct: 1858 SERPDLIEEFTAFMP 1872


>gi|223972985|gb|ACN30680.1| unknown [Zea mays]
 gi|413947146|gb|AFW79795.1| hypothetical protein ZEAMMB73_223244 [Zea mays]
          Length = 144

 Score = 50.4 bits (119), Expect = 0.005,   Method: Composition-based stats.
 Identities = 34/124 (27%), Positives = 56/124 (45%), Gaps = 21/124 (16%)

Query: 70  LEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLEDEQPPPKKPV 129
           + +     AQ     G + R  E+ +    +++ F     K  ++T              
Sbjct: 2   MAISSSIAAQTSGKGGTMPRANEMLRADSRMMVVFGALSSKPEQLT-------------- 47

Query: 130 EFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEE 189
            FEE++ FV K+K R   D  +Y S  D+L   R E   + + Y+E++ +FQ+HPDL EE
Sbjct: 48  -FEESLIFVKKVKAR---DYMLYLSLFDVLG--RTELPQL-DAYRELQQMFQNHPDLREE 100

Query: 190 FTHF 193
              F
Sbjct: 101 LERF 104


>gi|357485569|ref|XP_003613072.1| SIN3-like protein [Medicago truncatula]
 gi|355514407|gb|AES96030.1| SIN3-like protein [Medicago truncatula]
          Length = 326

 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 37/64 (57%), Gaps = 15/64 (23%)

Query: 965  SRQNISTNGVMTEGAKILRYNAESVKQFKIEREEGELSPNGDFEEDNFAVYGESGLEAVH 1024
            +R    TNG +  G ++               +E ELSPNG+FEE NF+VYG++GL+AV 
Sbjct: 180  ARSGTFTNGAIAGGTEV---------------KECELSPNGNFEEVNFSVYGDAGLDAVL 224

Query: 1025 KAKD 1028
            K KD
Sbjct: 225  KEKD 228


>gi|443687592|gb|ELT90527.1| hypothetical protein CAPTEDRAFT_220106 [Capitella teleta]
          Length = 102

 Score = 50.1 bits (118), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 1/66 (1%)

Query: 48  ALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQR-IDTAGVIARVKELFKGHRDLILGFNT 106
           A+ Y   VK +F DKRE + +FLE+    ++ R I  A  + RV ELF G+  L+  F  
Sbjct: 18  AVGYTNVVKCVFADKREVFLEFLEIFTGIRSGRNIKYAEAMLRVTELFDGYPHLVKHFER 77

Query: 107 FLPKGY 112
           FLP  Y
Sbjct: 78  FLPPDY 83


>gi|196002313|ref|XP_002111024.1| hypothetical protein TRIADDRAFT_54540 [Trichoplax adhaerens]
 gi|190586975|gb|EDV27028.1| hypothetical protein TRIADDRAFT_54540 [Trichoplax adhaerens]
          Length = 1042

 Score = 50.1 bits (118), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 33/157 (21%), Positives = 77/157 (49%), Gaps = 10/157 (6%)

Query: 48  ALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTF 107
           A AYL  VK   Q+ ++ Y  FLE +  F ++ +    +   V+ L   + +L+  F  F
Sbjct: 617 ASAYLTKVKATLQNDKDLYLQFLETLTGFTSRNLSPKELYDEVQSLLHKYPELLQDFIGF 676

Query: 108 L-PK-GYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKE 165
           L P+    + + +E+        ++F  A NF+ K++  F+ +   ++  +   + + + 
Sbjct: 677 LEPQDAKAVGMFMEN--------LDFSMARNFLRKVEIHFEKNPVHFQKIIKCFSTWLQS 728

Query: 166 NKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAAS 202
           +++ ++++Q +  + +    L++EF  F  D+   A+
Sbjct: 729 DQNPSKLHQSIINMLKGQKYLIDEFNRFFKDTFPPAN 765


>gi|440640553|gb|ELR10472.1| hypothetical protein GMDG_04753 [Geomyces destructans 20631-21]
          Length = 260

 Score = 49.7 bits (117), Expect = 0.008,   Method: Composition-based stats.
 Identities = 21/46 (45%), Positives = 32/46 (69%)

Query: 69  FLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEI 114
           FL ++KD++++ ID   +I    ELF GH  L+  F+TFLP+GY+I
Sbjct: 2   FLYLLKDYESKVIDIPSLINPTSELFAGHPSLVRRFSTFLPQGYQI 47


>gi|357500561|ref|XP_003620569.1| hypothetical protein MTR_6g087060 [Medicago truncatula]
 gi|355495584|gb|AES76787.1| hypothetical protein MTR_6g087060 [Medicago truncatula]
          Length = 489

 Score = 49.7 bits (117), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 11/84 (13%)

Query: 49  LAYLKAVKDIFQDKREKYDDFLEVMKDFKA--------QRIDTAGVIARVKELFKGHRDL 100
           + +L  VK +F  KREKY++F++ +  FK          R+       R+ ++ K H  L
Sbjct: 16  IGFLHEVKTVFHGKREKYEEFIKDIHAFKTWMDNNHRITRLPVKKFKERMNKVLKRHNHL 75

Query: 101 ILGFNTFLPKGYEITL--PLEDEQ 122
           ILGFN ++ K Y ITL  P+ D++
Sbjct: 76  ILGFNNYM-KHYRITLSIPINDDE 98


>gi|357500743|ref|XP_003620660.1| F-box/kelch-repeat protein [Medicago truncatula]
 gi|355495675|gb|AES76878.1| F-box/kelch-repeat protein [Medicago truncatula]
          Length = 433

 Score = 49.3 bits (116), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 11/84 (13%)

Query: 49  LAYLKAVKDIFQDKREKYDDFLEVMKDFKA--------QRIDTAGVIARVKELFKGHRDL 100
           + +L  VK +F  KREKY++F++ +  FK          R+       R+ ++ K H  L
Sbjct: 16  IGFLHEVKTVFHGKREKYEEFIKDIHAFKTWMDNNHRITRLPVKKFKERMNKVLKRHNHL 75

Query: 101 ILGFNTFLPKGYEITL--PLEDEQ 122
           ILGFN ++ K Y ITL  P+ D++
Sbjct: 76  ILGFNNYM-KHYRITLSIPINDDE 98


>gi|326521972|dbj|BAK04114.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 142

 Score = 49.3 bits (116), Expect = 0.012,   Method: Composition-based stats.
 Identities = 26/69 (37%), Positives = 39/69 (56%), Gaps = 6/69 (8%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDL 186
           +P+ F+E++ FV K+K R   +  +Y S  DIL    +   S  E YQ ++ LF+DHPDL
Sbjct: 27  EPLTFQESLRFVKKVKAR---NYMLYLSLFDILG---RTELSQLEAYQTLQLLFRDHPDL 80

Query: 187 LEEFTHFLP 195
            +    F P
Sbjct: 81  HKGLEKFRP 89


>gi|195606770|gb|ACG25215.1| hypothetical protein [Zea mays]
          Length = 123

 Score = 49.3 bits (116), Expect = 0.013,   Method: Composition-based stats.
 Identities = 32/109 (29%), Positives = 52/109 (47%), Gaps = 21/109 (19%)

Query: 87  IARVKELFKGHRDLILGFNTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQ 146
           + R  E+ +    +++ F     K  ++T               FEE++ FV K+K R  
Sbjct: 1   MPRANEMLRADSRMMVVFGALTSKPEQLT---------------FEESLIFVKKVKAR-- 43

Query: 147 GDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLP 195
            D  +Y S  D+L   R E   + + Y+E++ +FQ+HPDL EE   F P
Sbjct: 44  -DYMLYLSLFDVLG--RTELPQL-DAYRELQQMFQNHPDLREELERFRP 88


>gi|297845460|ref|XP_002890611.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297336453|gb|EFH66870.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 108

 Score = 48.9 bits (115), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 27/69 (39%), Positives = 41/69 (59%), Gaps = 1/69 (1%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDH-VYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
           K  + ++A  F+  +K RF+ D + V+ SF+D L   +  +KS+ EV  E    F++HPD
Sbjct: 30  KNTKVDDACRFLFNVKERFKDDTNDVFSSFIDNLLKLKSGSKSMNEVCHETTIQFREHPD 89

Query: 186 LLEEFTHFL 194
           LL EF  FL
Sbjct: 90  LLLEFAPFL 98


>gi|226496958|ref|NP_001143174.1| uncharacterized protein LOC100275672 [Zea mays]
 gi|195615420|gb|ACG29540.1| hypothetical protein [Zea mays]
          Length = 123

 Score = 48.9 bits (115), Expect = 0.014,   Method: Composition-based stats.
 Identities = 27/65 (41%), Positives = 39/65 (60%), Gaps = 6/65 (9%)

Query: 131 FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEF 190
           FEE++ FV K+K R   D  +Y S  D+L   R E   + + Y+E++ +FQ+HPDL EE 
Sbjct: 30  FEESLIFVKKVKVR---DYMLYLSLFDVLG--RTELPQL-DAYRELQQMFQNHPDLREEL 83

Query: 191 THFLP 195
             F P
Sbjct: 84  ERFRP 88


>gi|242008196|ref|XP_002424897.1| hypothetical protein Phum_PHUM159350 [Pediculus humanus corporis]
 gi|212508470|gb|EEB12159.1| hypothetical protein Phum_PHUM159350 [Pediculus humanus corporis]
          Length = 645

 Score = 48.5 bits (114), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 19/62 (30%), Positives = 42/62 (67%), Gaps = 1/62 (1%)

Query: 134 AINFVNKIKTRF-QGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTH 192
           A N++ K++ R  + D+++Y  F+D+L  ++K   ++ E++ +++++F  H DL+E+F  
Sbjct: 169 AKNYLLKVQQRLMENDENLYNQFIDLLCNFQKNGLTVCELFNKIKSIFSIHKDLIEDFVA 228

Query: 193 FL 194
           FL
Sbjct: 229 FL 230


>gi|428174190|gb|EKX43087.1| hypothetical protein GUITHDRAFT_110812 [Guillardia theta CCMP2712]
          Length = 587

 Score = 48.1 bits (113), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 3/68 (4%)

Query: 42  KLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLI 101
           K     ALA+LK VK    +   +YD FLE++  F+++ ++   V+  V E+  G   L+
Sbjct: 5   KPNIQTALAFLKQVKS---EMPTEYDTFLEILTQFRSKNVNAEMVVTVVIEMLIGREYLL 61

Query: 102 LGFNTFLP 109
            GF+ FLP
Sbjct: 62  QGFSQFLP 69


>gi|297719531|ref|NP_001172127.1| Os01g0109750 [Oryza sativa Japonica Group]
 gi|255672776|dbj|BAH90857.1| Os01g0109750 [Oryza sativa Japonica Group]
          Length = 137

 Score = 47.4 bits (111), Expect = 0.037,   Method: Composition-based stats.
 Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 6/68 (8%)

Query: 128 PVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLL 187
           P+ FE+++ FV K+K     +  +Y S  DIL    +   S  E Y+E++ LFQ++PDL 
Sbjct: 27  PLTFEDSLRFVKKVKA---CNYMLYLSLFDILG---RMELSRLEAYRELQLLFQNYPDLH 80

Query: 188 EEFTHFLP 195
           EE   F P
Sbjct: 81  EELEKFRP 88


>gi|297842871|ref|XP_002889317.1| hypothetical protein ARALYDRAFT_477264 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297335158|gb|EFH65576.1| hypothetical protein ARALYDRAFT_477264 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1016

 Score = 47.4 bits (111), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 7/105 (6%)

Query: 10   MNSQIKRPMISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDF 69
            M  + KR +  S+G  S       G GGG  ++ +   A A+L  VK+      E+Y  F
Sbjct: 902  MGLKKKRKVQESQGSASSSVLTAKGNGGGNKKEAS---ASAFLSQVKEKLNT--EEYKKF 956

Query: 70   LEVMKDFKAQRIDTAGVIARVKELFKGH-RD-LILGFNTFLPKGY 112
            +  M+  K + I  A V+  + +LF G  RD L++GF  F+P  Y
Sbjct: 957  IGYMQALKKKEIKLANVMESIVQLFCGRERDHLLMGFKDFVPVKY 1001


>gi|356551727|ref|XP_003544225.1| PREDICTED: LOW QUALITY PROTEIN: 6-phosphogluconate dehydrogenase,
           decarboxylating-like [Glycine max]
          Length = 378

 Score = 47.4 bits (111), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 32/68 (47%), Positives = 38/68 (55%), Gaps = 3/68 (4%)

Query: 77  KAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLEDEQPPPKKPVEF-EEAI 135
           K  RI   G I RV  +F     +    N  L KGY+I L LEDE+PP    +EF EEA+
Sbjct: 307 KLARIWKGGCIIRV--VFLDRIKMANQRNPNLAKGYKIILLLEDEKPPQNNLIEFIEEAM 364

Query: 136 NFVNKIKT 143
           NFV KIK 
Sbjct: 365 NFVGKIKV 372


>gi|42563365|ref|NP_178113.3| regulator of telomere elongation helicase 1 [Arabidopsis thaliana]
 gi|332198212|gb|AEE36333.1| regulator of telomere elongation helicase 1 [Arabidopsis thaliana]
          Length = 1040

 Score = 47.4 bits (111), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 7/105 (6%)

Query: 10   MNSQIKRPMISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDF 69
            M  + KR +  S+G  S       G GGG  ++ +   A A+L  VK+      E+Y  F
Sbjct: 919  MGLKKKRKVPESQGSASSSVLTAKGNGGGDKKEAS---ASAFLSQVKEKLNT--EEYKKF 973

Query: 70   LEVMKDFKAQRIDTAGVIARVKELFKG-HRD-LILGFNTFLPKGY 112
            +  M+  K + I  A V+  + +LF G  RD L++GF  F+P  Y
Sbjct: 974  IGYMQALKKKEIKLANVMQSIVQLFCGSERDHLLMGFKDFVPVKY 1018


>gi|307102873|gb|EFN51139.1| hypothetical protein CHLNCDRAFT_141347 [Chlorella variabilis]
          Length = 127

 Score = 47.4 bits (111), Expect = 0.048,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 40/68 (58%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
           +  +DA+A+L   +  ++D+ + Y  FL+ M+ +    +D A + A V+ LF GH  L+ 
Sbjct: 20  MVMDDAVAFLAKARARYRDRPQVYRRFLDAMQRYGGGALDVAALRAAVQALFAGHPALLK 79

Query: 103 GFNTFLPK 110
            F+ F+P+
Sbjct: 80  DFDAFVPR 87



 Score = 46.2 bits (108), Expect = 0.084,   Method: Composition-based stats.
 Identities = 21/64 (32%), Positives = 36/64 (56%)

Query: 132 EEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFT 191
           ++A+ F+ K + R++    VY+ FLD +  Y      +  +   V+ALF  HP LL++F 
Sbjct: 23  DDAVAFLAKARARYRDRPQVYRRFLDAMQRYGGGALDVAALRAAVQALFAGHPALLKDFD 82

Query: 192 HFLP 195
            F+P
Sbjct: 83  AFVP 86


>gi|338725194|ref|XP_001915796.2| PREDICTED: LOW QUALITY PROTEIN: GON-4-like protein [Equus caballus]
          Length = 2171

 Score = 47.4 bits (111), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 73/158 (46%), Gaps = 9/158 (5%)

Query: 48   ALAYLKAVKDIFQDKREKYDDFLEVMKDFKA--QRIDTAGVIARVKELFKGHRDLILGFN 105
            A AYL  V++  Q    KY+DFL+V+ +F++  QR     +   +K L +    L+  F 
Sbjct: 1562 AQAYLTRVREALQHIPGKYEDFLQVIYEFESSTQRQTAVDLYKSLKILLQDWPQLLKDFA 1621

Query: 106  TFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRK- 164
             FL     +   L +EQ        FE++  F+ +++  F  +   ++  + +L      
Sbjct: 1622 AFLLPEQALACGLFEEQ------QAFEKSRKFLRQLEICFAENPSHHQKIIKVLQSCADC 1675

Query: 165  ENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAAS 202
              + ITE+  ++  L + H  L +EF+ F      AAS
Sbjct: 1676 LPQEITELKTQMWQLLKGHDHLQDEFSIFFDHLRPAAS 1713


>gi|281338716|gb|EFB14300.1| hypothetical protein PANDA_018252 [Ailuropoda melanoleuca]
          Length = 2235

 Score = 47.0 bits (110), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 37/150 (24%), Positives = 70/150 (46%), Gaps = 9/150 (6%)

Query: 48   ALAYLKAVKDIFQDKREKYDDFLEVMKDFKA--QRIDTAGVIARVKELFKGHRDLILGFN 105
            A AYL  V++  Q    KY+DFL+V+ +F++  QR     +   ++ L +    L+  F 
Sbjct: 1625 AQAYLTRVREALQHIPGKYEDFLQVIYEFESSTQRQTAVDLYRSLQALLQDWPQLLKDFA 1684

Query: 106  TFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRK- 164
             FL     +   L +EQ        FE++  F+ +++  F  +   ++  + +L      
Sbjct: 1685 AFLLPEQALACGLFEEQ------QAFEKSRKFLRQLEICFAENPSHHQKIIKVLQSCADC 1738

Query: 165  ENKSITEVYQEVEALFQDHPDLLEEFTHFL 194
              + ITE+  ++  L + H  L +EF+ F 
Sbjct: 1739 LPQEITELKTQMWQLLKGHDHLQDEFSVFF 1768


>gi|73961586|ref|XP_547544.2| PREDICTED: GON-4-like protein [Canis lupus familiaris]
          Length = 2226

 Score = 47.0 bits (110), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 37/150 (24%), Positives = 70/150 (46%), Gaps = 9/150 (6%)

Query: 48   ALAYLKAVKDIFQDKREKYDDFLEVMKDFKA--QRIDTAGVIARVKELFKGHRDLILGFN 105
            A AYL  V++  Q    KY+DFL+V+ +F++  QR     +   ++ L +    L+  F 
Sbjct: 1617 AQAYLTRVREALQHIPGKYEDFLQVIYEFESSTQRQTAVDLYKSLQVLLQDWPQLLKDFA 1676

Query: 106  TFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRK- 164
             FL     +   L +EQ        FE++  F+ +++  F  +   ++  + +L      
Sbjct: 1677 AFLLPEQALACGLFEEQ------QAFEKSRKFLRQLEICFAENPSHHQKIIKVLQSCADC 1730

Query: 165  ENKSITEVYQEVEALFQDHPDLLEEFTHFL 194
              + ITE+  ++  L + H  L +EF+ F 
Sbjct: 1731 LPQEITELKTQMWQLLKGHDHLQDEFSVFF 1760


>gi|357128157|ref|XP_003565742.1| PREDICTED: uncharacterized protein LOC100844759 [Brachypodium
           distachyon]
          Length = 135

 Score = 47.0 bits (110), Expect = 0.053,   Method: Composition-based stats.
 Identities = 28/69 (40%), Positives = 38/69 (55%), Gaps = 8/69 (11%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDL 186
           +P+ FEE++ FV K+K R   +  +Y S  DIL    +   S  E Y  +  LF+DHPDL
Sbjct: 26  EPLTFEESLRFVKKVKAR---NYMLYLSLFDILG---RMELSRLEAYGAL--LFRDHPDL 77

Query: 187 LEEFTHFLP 195
            EE   F P
Sbjct: 78  CEELEKFRP 86


>gi|301785826|ref|XP_002928337.1| PREDICTED: GON-4-like protein-like [Ailuropoda melanoleuca]
          Length = 2230

 Score = 47.0 bits (110), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 37/150 (24%), Positives = 70/150 (46%), Gaps = 9/150 (6%)

Query: 48   ALAYLKAVKDIFQDKREKYDDFLEVMKDFKA--QRIDTAGVIARVKELFKGHRDLILGFN 105
            A AYL  V++  Q    KY+DFL+V+ +F++  QR     +   ++ L +    L+  F 
Sbjct: 1620 AQAYLTRVREALQHIPGKYEDFLQVIYEFESSTQRQTAVDLYRSLQALLQDWPQLLKDFA 1679

Query: 106  TFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRK- 164
             FL     +   L +EQ        FE++  F+ +++  F  +   ++  + +L      
Sbjct: 1680 AFLLPEQALACGLFEEQ------QAFEKSRKFLRQLEICFAENPSHHQKIIKVLQSCADC 1733

Query: 165  ENKSITEVYQEVEALFQDHPDLLEEFTHFL 194
              + ITE+  ++  L + H  L +EF+ F 
Sbjct: 1734 LPQEITELKTQMWQLLKGHDHLQDEFSVFF 1763


>gi|125524119|gb|EAY72233.1| hypothetical protein OsI_00087 [Oryza sativa Indica Group]
 gi|125568732|gb|EAZ10247.1| hypothetical protein OsJ_00079 [Oryza sativa Japonica Group]
          Length = 131

 Score = 47.0 bits (110), Expect = 0.058,   Method: Composition-based stats.
 Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 6/68 (8%)

Query: 128 PVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLL 187
           P+ FE+++ FV K+K     +  +Y S  DIL    +   S  E Y+E++ LFQ++PDL 
Sbjct: 27  PLTFEDSLRFVKKVKA---CNYMLYLSLFDILG---RMELSRLEAYRELQLLFQNYPDLH 80

Query: 188 EEFTHFLP 195
           EE   F P
Sbjct: 81  EELEKFRP 88


>gi|350583314|ref|XP_003481484.1| PREDICTED: GON-4-like protein, partial [Sus scrofa]
          Length = 1358

 Score = 47.0 bits (110), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 37/150 (24%), Positives = 70/150 (46%), Gaps = 9/150 (6%)

Query: 48  ALAYLKAVKDIFQDKREKYDDFLEVMKDFKA--QRIDTAGVIARVKELFKGHRDLILGFN 105
           A AYL  V++  Q    KY+DFL+V+ +F++  QR     +   ++ L +    L+  F 
Sbjct: 747 AQAYLTRVREALQHIPGKYEDFLQVIYEFESSTQRQTAVDLYKSLQILLQDWPQLLKDFA 806

Query: 106 TFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRK- 164
            FL     +   L +EQ        FE++  F+ +++  F  +   ++  + +L      
Sbjct: 807 AFLLPEQALACGLFEEQ------QAFEKSRKFLRQLEICFAENPSHHQKIIKVLQSCADC 860

Query: 165 ENKSITEVYQEVEALFQDHPDLLEEFTHFL 194
             + ITE+  ++  L + H  L +EF+ F 
Sbjct: 861 LPQEITELKTQMWQLLKGHDHLQDEFSIFF 890


>gi|344286475|ref|XP_003414983.1| PREDICTED: LOW QUALITY PROTEIN: GON-4-like protein-like [Loxodonta
            africana]
          Length = 2198

 Score = 47.0 bits (110), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 37/150 (24%), Positives = 70/150 (46%), Gaps = 9/150 (6%)

Query: 48   ALAYLKAVKDIFQDKREKYDDFLEVMKDFKA--QRIDTAGVIARVKELFKGHRDLILGFN 105
            A AYL  V++  Q    KY+DFL+V+ +F++  QR     +   ++ L +    L+  F 
Sbjct: 1594 AQAYLTRVREALQHIPGKYEDFLQVIYEFESSTQRQTAVDLYKSLRTLLQDWPQLLKDFA 1653

Query: 106  TFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRK- 164
             FL     +   L +EQ        FE++  F+ +++  F  +   ++  + +L      
Sbjct: 1654 AFLLPEQALACGLFEEQ------QAFEKSRKFLRQLEICFAENPSHHQKIIKVLQGCADC 1707

Query: 165  ENKSITEVYQEVEALFQDHPDLLEEFTHFL 194
              + ITE+  ++  L + H  L +EF+ F 
Sbjct: 1708 LPQEITELKTQMWQLLKGHDHLQDEFSIFF 1737


>gi|335308286|ref|XP_003361168.1| PREDICTED: GON-4-like protein-like, partial [Sus scrofa]
          Length = 1343

 Score = 47.0 bits (110), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 37/150 (24%), Positives = 70/150 (46%), Gaps = 9/150 (6%)

Query: 48  ALAYLKAVKDIFQDKREKYDDFLEVMKDFKA--QRIDTAGVIARVKELFKGHRDLILGFN 105
           A AYL  V++  Q    KY+DFL+V+ +F++  QR     +   ++ L +    L+  F 
Sbjct: 732 AQAYLTRVREALQHIPGKYEDFLQVIYEFESSTQRQTAVDLYKSLQILLQDWPQLLKDFA 791

Query: 106 TFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRK- 164
            FL     +   L +EQ        FE++  F+ +++  F  +   ++  + +L      
Sbjct: 792 AFLLPEQALACGLFEEQ------QAFEKSRKFLRQLEICFAENPSHHQKIIKVLQSCADC 845

Query: 165 ENKSITEVYQEVEALFQDHPDLLEEFTHFL 194
             + ITE+  ++  L + H  L +EF+ F 
Sbjct: 846 LPQEITELKTQMWQLLKGHDHLQDEFSIFF 875


>gi|102140003|gb|ABF70138.1| hypothetical protein MBP_91N22.74 [Musa balbisiana]
          Length = 196

 Score = 47.0 bits (110), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 52/106 (49%), Gaps = 27/106 (25%)

Query: 90  VKELFKGHRDLILGFNTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDD 149
           +K +F G+ +L+  FN+FL +                 PV FEE+++FV K+K R   D 
Sbjct: 4   MKIVFTGNPNLMFDFNSFLSRW---------------NPVTFEESLDFVKKVKAR---DY 45

Query: 150 HVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLP 195
            +Y S  DIL+   ++ ++  E+Y        DH DL +E   F P
Sbjct: 46  QLYLSLSDILS---QKEQTPPEIYHN------DHDDLCKELMRFKP 82


>gi|431892333|gb|ELK02773.1| GON-4-like protein [Pteropus alecto]
          Length = 2008

 Score = 46.6 bits (109), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 36/150 (24%), Positives = 69/150 (46%), Gaps = 9/150 (6%)

Query: 48   ALAYLKAVKDIFQDKREKYDDFLEVMKDFKA--QRIDTAGVIARVKELFKGHRDLILGFN 105
            A AYL  V++  Q    KY+DFL+V+  F++  QR     +   ++ L +    L+  F 
Sbjct: 1374 AQAYLTRVREALQHVPGKYEDFLQVIHGFESGPQRQTAVELYGSLRLLLQDWPQLLKDFA 1433

Query: 106  TFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRK- 164
             FL     +   L +EQ        FE++  F+ +++  F  +   ++  + +L      
Sbjct: 1434 AFLLPEQALACGLFEEQ------QAFEKSRKFLRQLEICFAENPSHHQKIIRVLQSCADC 1487

Query: 165  ENKSITEVYQEVEALFQDHPDLLEEFTHFL 194
              + +TE+  ++  L + H  L +EF+ F 
Sbjct: 1488 PPQEVTELKTQMWHLLKGHHHLQDEFSVFF 1517


>gi|7020145|dbj|BAA91011.1| unnamed protein product [Homo sapiens]
          Length = 697

 Score = 46.6 bits (109), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 73/158 (46%), Gaps = 9/158 (5%)

Query: 48  ALAYLKAVKDIFQDKREKYDDFLEVMKDFKA--QRIDTAGVIARVKELFKGHRDLILGFN 105
           A AYL  V++  Q    KY+DFL+V+ +F++  QR     +   ++ L +    L+  F 
Sbjct: 88  AQAYLTRVREALQHIPGKYEDFLQVIYEFESSTQRRTAVDLYKSLQILLQDWPQLLKDFA 147

Query: 106 TFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILN-MYRK 164
            FL     +   L +EQ        FE++  F+ +++  F  +   ++  + +L      
Sbjct: 148 AFLLPEQALACGLFEEQ------QAFEKSRKFLRQLEICFAENPSHHQKIIKVLQGCADC 201

Query: 165 ENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAAS 202
             + ITE+  ++  L + H  L +EF+ F      AAS
Sbjct: 202 LPQEITELKTQMWQLLKGHDHLQDEFSIFFDHLRPAAS 239


>gi|94732798|emb|CAK10928.1| novel protein [Danio rerio]
          Length = 1422

 Score = 46.6 bits (109), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 40/157 (25%), Positives = 76/157 (48%), Gaps = 18/157 (11%)

Query: 48   ALAYLK-----AVKDIFQDKREKYDDFLEVMKDF--KAQRIDTAGVIARVKELFKGHRDL 100
            A AYL+      V ++      K D+FL ++ DF    +   +  ++ R+K + +   +L
Sbjct: 1128 AQAYLEKARSLIVYEVLHQVPGKVDEFLCILSDFVKNPESHTSLQLLMRLKPILEDWPEL 1187

Query: 101  ILGFNTFL-P-KGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDI 158
            +  F  FL P +  E  L L ++Q        FE +  F+ ++++ F    ++Y+  + I
Sbjct: 1188 LQDFAAFLHPDQARECGL-LAEQQ-------AFERSRGFLRQLESTFGEQSYLYRKVVHI 1239

Query: 159  LNMYRKENKS-ITEVYQEVEALFQDHPDLLEEFTHFL 194
            L   + +  + + E+  E+  L +DH DLLEEF  + 
Sbjct: 1240 LQGDQSQGLADLKEIKAEMALLLRDHTDLLEEFWEYF 1276


>gi|40675366|gb|AAH64933.1| GON4L protein [Homo sapiens]
          Length = 719

 Score = 46.6 bits (109), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 73/158 (46%), Gaps = 9/158 (5%)

Query: 48  ALAYLKAVKDIFQDKREKYDDFLEVMKDFKA--QRIDTAGVIARVKELFKGHRDLILGFN 105
           A AYL  V++  Q    KY+DFL+V+ +F++  QR     +   ++ L +    L+  F 
Sbjct: 110 AQAYLTRVREALQHIPGKYEDFLQVIYEFESSTQRRTAVDLYKSLQILLQDWPQLLKDFA 169

Query: 106 TFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILN-MYRK 164
            FL     +   L +EQ        FE++  F+ +++  F  +   ++  + +L      
Sbjct: 170 AFLLPEQALACGLFEEQ------QAFEKSRKFLRQLEICFAENPSHHQKIIKVLQGCADC 223

Query: 165 ENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAAS 202
             + ITE+  ++  L + H  L +EF+ F      AAS
Sbjct: 224 LPQEITELKTQMWQLLKGHDHLQDEFSIFFDHLRPAAS 261


>gi|358348819|ref|XP_003638440.1| hypothetical protein MTR_131s0023 [Medicago truncatula]
 gi|355504375|gb|AES85578.1| hypothetical protein MTR_131s0023 [Medicago truncatula]
          Length = 353

 Score = 46.6 bits (109), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 76/152 (50%), Gaps = 31/152 (20%)

Query: 47  DALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNT 106
           D LA+ KAVK  FQ +R+ Y+  L+V+K+F+ Q          VK L KGH D I     
Sbjct: 9   DELAFRKAVKVSFQVRRKNYNGILKVLKEFQDQ---------SVKGLLKGHTDRIT---- 55

Query: 107 FLPKGYEIT----LPLEDEQPPP-------KKPVEFEEAINFVNKIKTRFQGDDHVYKSF 155
            LP  +E T      +E+ +  P        K ++F++   F    K  ++GD++   SF
Sbjct: 56  -LPFQFETTGKKLKKVEENRDFPWDVLDIISKTLDFDDLFQFAGVCK-NWRGDNN---SF 110

Query: 156 LDILNMYRKENKSITEVYQEVEA-LFQDHPDL 186
           + ++N + + NK I     EV++ +F +H  L
Sbjct: 111 M-LINPFTRINKVINTSNFEVQSYMFANHALL 141


>gi|10047287|dbj|BAB13432.1| KIAA1606 protein [Homo sapiens]
          Length = 1095

 Score = 46.2 bits (108), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 37/150 (24%), Positives = 70/150 (46%), Gaps = 9/150 (6%)

Query: 48  ALAYLKAVKDIFQDKREKYDDFLEVMKDFKA--QRIDTAGVIARVKELFKGHRDLILGFN 105
           A AYL  V++  Q    KY+DFL+V+ +F++  QR     +   ++ L +    L+  F 
Sbjct: 486 AQAYLTRVREALQHIPGKYEDFLQVIYEFESSTQRRTAVDLYKSLQILLQDWPQLLKDFA 545

Query: 106 TFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRK- 164
            FL     +   L +EQ        FE++  F+ +++  F  +   ++  + +L      
Sbjct: 546 AFLLPEQALACGLFEEQ------QAFEKSRKFLRQLEICFAENPSHHQKIIKVLQGCADC 599

Query: 165 ENKSITEVYQEVEALFQDHPDLLEEFTHFL 194
             + ITE+  ++  L + H  L +EF+ F 
Sbjct: 600 LPQEITELKTQMWQLLKGHDHLQDEFSIFF 629


>gi|219362821|ref|NP_001136635.1| uncharacterized protein LOC100216763 [Zea mays]
 gi|194695498|gb|ACF81833.1| unknown [Zea mays]
 gi|194696458|gb|ACF82313.1| unknown [Zea mays]
 gi|413947143|gb|AFW79792.1| hypothetical protein ZEAMMB73_223244 [Zea mays]
 gi|413947144|gb|AFW79793.1| hypothetical protein ZEAMMB73_223244 [Zea mays]
 gi|413947145|gb|AFW79794.1| hypothetical protein ZEAMMB73_223244 [Zea mays]
          Length = 126

 Score = 46.2 bits (108), Expect = 0.086,   Method: Composition-based stats.
 Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 6/63 (9%)

Query: 131 FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEF 190
           FEE++ FV K+K R   D  +Y S  D+L   R E   + + Y+E++ +FQ+HPDL EE 
Sbjct: 30  FEESLIFVKKVKAR---DYMLYLSLFDVLG--RTELPQL-DAYRELQQMFQNHPDLREEL 83

Query: 191 THF 193
             F
Sbjct: 84  ERF 86


>gi|357443451|ref|XP_003592003.1| hypothetical protein MTR_1g097700 [Medicago truncatula]
 gi|357443493|ref|XP_003592024.1| hypothetical protein MTR_1g097930 [Medicago truncatula]
 gi|355481051|gb|AES62254.1| hypothetical protein MTR_1g097700 [Medicago truncatula]
 gi|355481072|gb|AES62275.1| hypothetical protein MTR_1g097930 [Medicago truncatula]
          Length = 156

 Score = 46.2 bits (108), Expect = 0.087,   Method: Composition-based stats.
 Identities = 37/132 (28%), Positives = 65/132 (49%), Gaps = 14/132 (10%)

Query: 63  REKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLEDEQ 122
           +EK ++FL+++KDFKA +I T G  A +++L+K   D  L F +F  KG + T    DE 
Sbjct: 2   KEKCNEFLKLLKDFKAIKIGTVGDTAALEDLYKQCTDFKLRFISFTFKGSQFT---NDET 58

Query: 123 PPPKKPVEFEEAINFVNKIKTRFQ-----GDDHVYKSFLDILNMYRKENKSITEVYQEVE 177
                  E++E    +++++++ Q         V     D+   Y+    S+   YQ + 
Sbjct: 59  GQKFVIEEYQEICAGIDRLESKIQLLVRIDPRGVEARLQDLYKAYKLSFNSLMHGYQII- 117

Query: 178 ALFQDHPDLLEE 189
                HP+L E+
Sbjct: 118 -----HPELYED 124


>gi|300797879|ref|NP_001179554.1| GON-4-like protein [Bos taurus]
 gi|296489727|tpg|DAA31840.1| TPA: gon-4-like [Bos taurus]
          Length = 2239

 Score = 46.2 bits (108), Expect = 0.092,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 73/158 (46%), Gaps = 9/158 (5%)

Query: 48   ALAYLKAVKDIFQDKREKYDDFLEVMKDFKA--QRIDTAGVIARVKELFKGHRDLILGFN 105
            A AYL  V++  Q    KY+DFL+V+ +F++  QR     +   ++ L +    L+  F 
Sbjct: 1630 AQAYLTRVREALQHIPGKYEDFLQVIYEFESSTQRQTAVDLYKSLQILLQDWPQLLKDFA 1689

Query: 106  TFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRK- 164
             FL     +   L +EQ        FE++  F+ +++  F  +   ++  + +L      
Sbjct: 1690 AFLLPEQALACGLFEEQ------QAFEKSRKFLRQLEICFAENPSHHQKIIKVLQSCADC 1743

Query: 165  ENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAAS 202
              + ITE+  ++  L + H  L +EF+ F      AAS
Sbjct: 1744 LPQEITELKTQMWQLLKGHDHLQDEFSIFFDHLRPAAS 1781


>gi|444721695|gb|ELW62415.1| GON-4-like protein [Tupaia chinensis]
          Length = 1362

 Score = 46.2 bits (108), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 36/150 (24%), Positives = 70/150 (46%), Gaps = 9/150 (6%)

Query: 48  ALAYLKAVKDIFQDKREKYDDFLEVMKDFKA--QRIDTAGVIARVKELFKGHRDLILGFN 105
           A AYL  V++  Q    KY+DFL+++ +F++  QR     +   ++ L +    L+  F 
Sbjct: 754 AQAYLTRVREALQHIPGKYEDFLQIIYEFESSTQRQTAVDLYKSLRLLLQDWPQLLKDFA 813

Query: 106 TFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDIL-NMYRK 164
            FL     +   L +EQ        FE++  F+ +++  F  +   ++  + +L      
Sbjct: 814 AFLLPEQALACGLFEEQ------QAFEKSRKFLRQLEICFAENPSHHQKIIKVLQGCADC 867

Query: 165 ENKSITEVYQEVEALFQDHPDLLEEFTHFL 194
             + ITE+  ++  L + H  L +EF+ F 
Sbjct: 868 LPQEITELKTQMWQLLKGHDHLQDEFSVFF 897


>gi|344241965|gb|EGV98068.1| GON-4-like protein [Cricetulus griseus]
          Length = 745

 Score = 46.2 bits (108), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 39/158 (24%), Positives = 74/158 (46%), Gaps = 9/158 (5%)

Query: 48  ALAYLKAVKDIFQDKREKYDDFLEVMKDFKA--QRIDTAGVIARVKELFKGHRDLILGFN 105
           A AYL  V++  Q    KY+DFL+V+ +F++  QR     +   ++ L +    L+  F 
Sbjct: 139 AQAYLTRVREALQHVPGKYEDFLQVIYEFESSTQRHTAVDLYKSLQTLLQDWPQLLKDFA 198

Query: 106 TFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILN-MYRK 164
            FL     ++  L +EQ        FE++  F+ +++  F  +   ++  + +L      
Sbjct: 199 AFLLPEQALSCGLFEEQ------QAFEKSRKFLRQLEICFAENPTHHQKIIKVLQGCADC 252

Query: 165 ENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAAS 202
             + I+E+  ++  L + H  L +EF+ F      AAS
Sbjct: 253 LPQDISELKTQMWQLLKGHDHLQDEFSIFFDHLRPAAS 290


>gi|151553564|gb|AAI48970.1| GON4L protein [Bos taurus]
          Length = 1707

 Score = 46.2 bits (108), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 73/158 (46%), Gaps = 9/158 (5%)

Query: 48   ALAYLKAVKDIFQDKREKYDDFLEVMKDFKA--QRIDTAGVIARVKELFKGHRDLILGFN 105
            A AYL  V++  Q    KY+DFL+V+ +F++  QR     +   ++ L +    L+  F 
Sbjct: 1098 AQAYLTRVREALQHIPGKYEDFLQVIYEFESSTQRQTAVDLYKSLQILLQDWPQLLKDFA 1157

Query: 106  TFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRK- 164
             FL     +   L +EQ        FE++  F+ +++  F  +   ++  + +L      
Sbjct: 1158 AFLLPEQALACGLFEEQ------QAFEKSRKFLRQLEICFAENPSHHQKIIKVLQSCADC 1211

Query: 165  ENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAAS 202
              + ITE+  ++  L + H  L +EF+ F      AAS
Sbjct: 1212 LPQEITELKTQMWQLLKGHDHLQDEFSIFFDHLRPAAS 1249


>gi|224004554|ref|XP_002295928.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|209585960|gb|ACI64645.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 1027

 Score = 45.8 bits (107), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 21/63 (33%), Positives = 39/63 (61%), Gaps = 1/63 (1%)

Query: 133 EAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTH 192
           +A+ +++K+K RF     ++  F +++  + ++ + I EV  +V AL   H DL EEF+H
Sbjct: 396 DALKYLDKVKERFVSCPAIFIKFSELILSF-QQGRDIGEVADDVSALLAGHDDLREEFSH 454

Query: 193 FLP 195
           +LP
Sbjct: 455 WLP 457


>gi|402856534|ref|XP_003892842.1| PREDICTED: GON-4-like protein-like, partial [Papio anubis]
          Length = 1610

 Score = 45.8 bits (107), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 73/158 (46%), Gaps = 9/158 (5%)

Query: 48   ALAYLKAVKDIFQDKREKYDDFLEVMKDFKA--QRIDTAGVIARVKELFKGHRDLILGFN 105
            A AYL  V++  Q    KY+DFL+V+ +F++  QR     +   ++ L +    L+  F 
Sbjct: 1001 AQAYLTRVREALQHIPGKYEDFLQVIYEFESSTQRQTAVDLYKSLQILLQDWPQLLKDFA 1060

Query: 106  TFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILN-MYRK 164
             FL     +   L +EQ        FE++  F+ +++  F  +   ++  + +L      
Sbjct: 1061 AFLLPEQALACGLFEEQ------QAFEKSRKFLRQLEICFAENPSHHQKIIKVLQGCADC 1114

Query: 165  ENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAAS 202
              + ITE+  ++  L + H  L +EF+ F      AAS
Sbjct: 1115 LPQEITELKTQMWQLLKGHDHLQDEFSIFFDHLRPAAS 1152


>gi|321479003|gb|EFX89959.1| hypothetical protein DAPPUDRAFT_220021 [Daphnia pulex]
          Length = 1353

 Score = 45.8 bits (107), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 20/71 (28%), Positives = 43/71 (60%), Gaps = 2/71 (2%)

Query: 137  FVNKIKTRFQGDDHV-YKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFL- 194
            +  K+++R +  + V +K F   L  ++  + S  E+Y+++E++ +D+ DLLEEF  FL 
Sbjct: 1164 YFMKVRSRLEQSNPVAFKEFFTTLGQFQSSSGSFLELYRKIESILKDNMDLLEEFVLFLS 1223

Query: 195  PDSSGAASIHY 205
            P+++    + +
Sbjct: 1224 PEAAAQCGVQF 1234


>gi|297280253|ref|XP_002808290.1| PREDICTED: LOW QUALITY PROTEIN: GON-4-like protein-like [Macaca
            mulatta]
          Length = 2234

 Score = 45.8 bits (107), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 73/158 (46%), Gaps = 9/158 (5%)

Query: 48   ALAYLKAVKDIFQDKREKYDDFLEVMKDFKA--QRIDTAGVIARVKELFKGHRDLILGFN 105
            A AYL  V++  Q    KY+DFL+V+ +F++  QR     +   ++ L +    L+  F 
Sbjct: 1631 AQAYLTRVREALQHIPGKYEDFLQVIYEFESSTQRQTAVDLYKSLQILLQDWPQLLKDFA 1690

Query: 106  TFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRK- 164
             FL     +   L +EQ        FE++  F+ +++  F  +   ++  + +L      
Sbjct: 1691 AFLLPEQALACGLFEEQ------QAFEKSRKFLRQLEICFAENPSHHQKIIKVLQGCADC 1744

Query: 165  ENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAAS 202
              + ITE+  ++  L + H  L +EF+ F      AAS
Sbjct: 1745 LPQEITELKTQMWQLLKGHDHLQDEFSIFFDHLRPAAS 1782


>gi|390476803|ref|XP_002760037.2| PREDICTED: GON-4-like protein isoform 2 [Callithrix jacchus]
          Length = 2239

 Score = 45.8 bits (107), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 73/158 (46%), Gaps = 9/158 (5%)

Query: 48   ALAYLKAVKDIFQDKREKYDDFLEVMKDFKA--QRIDTAGVIARVKELFKGHRDLILGFN 105
            A AYL  V++  Q    KY+DFL+V+ +F++  QR     +   ++ L +    L+  F 
Sbjct: 1631 AQAYLTRVREALQHIPGKYEDFLQVIYEFESSTQRQTAVDLYKSLRILLQEWPQLLKDFA 1690

Query: 106  TFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRK- 164
             FL     +   L +EQ        FE++  F+ +++  F  +   ++  + +L      
Sbjct: 1691 AFLLPEQALACGLFEEQ------QAFEKSRKFLRQLEICFAENPSHHQKIIKVLQGCADC 1744

Query: 165  ENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAAS 202
              + ITE+  ++  L + H  L +EF+ F      AAS
Sbjct: 1745 LPQEITELKTQMWQLLKGHDHLQDEFSVFFDHLRPAAS 1782


>gi|387541904|gb|AFJ71579.1| GON-4-like protein isoform a [Macaca mulatta]
          Length = 2240

 Score = 45.8 bits (107), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 73/158 (46%), Gaps = 9/158 (5%)

Query: 48   ALAYLKAVKDIFQDKREKYDDFLEVMKDFKA--QRIDTAGVIARVKELFKGHRDLILGFN 105
            A AYL  V++  Q    KY+DFL+V+ +F++  QR     +   ++ L +    L+  F 
Sbjct: 1631 AQAYLTRVREALQHIPGKYEDFLQVIYEFESSTQRQTAVDLYKSLQILLQDWPQLLKDFA 1690

Query: 106  TFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRK- 164
             FL     +   L +EQ        FE++  F+ +++  F  +   ++  + +L      
Sbjct: 1691 AFLLPEQALACGLFEEQ------QAFEKSRKFLRQLEICFAENPSHHQKIIKVLQGCADC 1744

Query: 165  ENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAAS 202
              + ITE+  ++  L + H  L +EF+ F      AAS
Sbjct: 1745 LPQEITELKTQMWQLLKGHDHLQDEFSIFFDHLRPAAS 1782


>gi|397500892|ref|XP_003821138.1| PREDICTED: LOW QUALITY PROTEIN: GON-4-like protein [Pan paniscus]
          Length = 2242

 Score = 45.8 bits (107), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 73/158 (46%), Gaps = 9/158 (5%)

Query: 48   ALAYLKAVKDIFQDKREKYDDFLEVMKDFKA--QRIDTAGVIARVKELFKGHRDLILGFN 105
            A AYL  V++  Q    KY+DFL+V+ +F++  QR     +   ++ L +    L+  F 
Sbjct: 1632 AQAYLTRVREALQHIPGKYEDFLQVIYEFESSTQRQTAVDLYKSLQILLQDWPQLLKDFA 1691

Query: 106  TFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRK- 164
             FL     +   L +EQ        FE++  F+ +++  F  +   ++  + +L      
Sbjct: 1692 AFLLPEQALACGLFEEQ------QAFEKSRKFLRQLEICFAENPSHHQKIIKVLQGCADC 1745

Query: 165  ENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAAS 202
              + ITE+  ++  L + H  L +EF+ F      AAS
Sbjct: 1746 LPQEITELKTQMWQLLKGHDHLQDEFSIFFDHLRPAAS 1783


>gi|380814022|gb|AFE78885.1| GON-4-like protein isoform a [Macaca mulatta]
          Length = 2240

 Score = 45.4 bits (106), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 73/158 (46%), Gaps = 9/158 (5%)

Query: 48   ALAYLKAVKDIFQDKREKYDDFLEVMKDFKA--QRIDTAGVIARVKELFKGHRDLILGFN 105
            A AYL  V++  Q    KY+DFL+V+ +F++  QR     +   ++ L +    L+  F 
Sbjct: 1631 AQAYLTRVREALQHIPGKYEDFLQVIYEFESSTQRQTAVDLYKSLQILLQDWPQLLKDFA 1690

Query: 106  TFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRK- 164
             FL     +   L +EQ        FE++  F+ +++  F  +   ++  + +L      
Sbjct: 1691 AFLLPEQALACGLFEEQ------QAFEKSRKFLRQLEICFAENPSHHQKIIKVLQGCADC 1744

Query: 165  ENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAAS 202
              + ITE+  ++  L + H  L +EF+ F      AAS
Sbjct: 1745 LPQEITELKTQMWQLLKGHDHLQDEFSIFFDHLRPAAS 1782


>gi|410306370|gb|JAA31785.1| gon-4-like [Pan troglodytes]
 gi|410355465|gb|JAA44336.1| gon-4-like [Pan troglodytes]
          Length = 2240

 Score = 45.4 bits (106), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 73/158 (46%), Gaps = 9/158 (5%)

Query: 48   ALAYLKAVKDIFQDKREKYDDFLEVMKDFKA--QRIDTAGVIARVKELFKGHRDLILGFN 105
            A AYL  V++  Q    KY+DFL+V+ +F++  QR     +   ++ L +    L+  F 
Sbjct: 1631 AQAYLTRVREALQHIPGKYEDFLQVIYEFESSTQRQTAVDLYKSLQILLQDWPQLLKDFA 1690

Query: 106  TFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRK- 164
             FL     +   L +EQ        FE++  F+ +++  F  +   ++  + +L      
Sbjct: 1691 AFLLPEQALACGLFEEQ------QAFEKSRKFLRQLEICFAENPSHHQKIIKVLQGCADC 1744

Query: 165  ENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAAS 202
              + ITE+  ++  L + H  L +EF+ F      AAS
Sbjct: 1745 LPQEITELKTQMWQLLKGHDHLQDEFSIFFDHLRPAAS 1782


>gi|410264038|gb|JAA19985.1| gon-4-like [Pan troglodytes]
          Length = 2240

 Score = 45.4 bits (106), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 73/158 (46%), Gaps = 9/158 (5%)

Query: 48   ALAYLKAVKDIFQDKREKYDDFLEVMKDFKA--QRIDTAGVIARVKELFKGHRDLILGFN 105
            A AYL  V++  Q    KY+DFL+V+ +F++  QR     +   ++ L +    L+  F 
Sbjct: 1631 AQAYLTRVREALQHIPGKYEDFLQVIYEFESSTQRQTAVDLYKSLQILLQDWPQLLKDFA 1690

Query: 106  TFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRK- 164
             FL     +   L +EQ        FE++  F+ +++  F  +   ++  + +L      
Sbjct: 1691 AFLLPEQALACGLFEEQ------QAFEKSRKFLRQLEICFAENPSHHQKIIKVLQGCADC 1744

Query: 165  ENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAAS 202
              + ITE+  ++  L + H  L +EF+ F      AAS
Sbjct: 1745 LPQEITELKTQMWQLLKGHDHLQDEFSIFFDHLRPAAS 1782


>gi|297663274|ref|XP_002810099.1| PREDICTED: GON-4-like protein isoform 2 [Pongo abelii]
          Length = 2242

 Score = 45.4 bits (106), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 73/158 (46%), Gaps = 9/158 (5%)

Query: 48   ALAYLKAVKDIFQDKREKYDDFLEVMKDFKA--QRIDTAGVIARVKELFKGHRDLILGFN 105
            A AYL  V++  Q    KY+DFL+V+ +F++  QR     +   ++ L +    L+  F 
Sbjct: 1632 AQAYLTRVREALQHIPGKYEDFLQVIYEFESSTQRQTAVDLYKSLQILLQDWPQLLKDFA 1691

Query: 106  TFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILN-MYRK 164
             FL     +   L +EQ        FE++  F+ +++  F  +   ++  + +L      
Sbjct: 1692 AFLLPEQALACGLFEEQ------QAFEKSRKFLRQLEICFAENPSHHQKIIKVLQGCADC 1745

Query: 165  ENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAAS 202
              + ITE+  ++  L + H  L +EF+ F      AAS
Sbjct: 1746 LPQEITELKTQMWQLLKGHDHLQDEFSIFFDHLRPAAS 1783


>gi|403293711|ref|XP_003937856.1| PREDICTED: GON-4-like protein isoform 2 [Saimiri boliviensis
            boliviensis]
          Length = 2240

 Score = 45.4 bits (106), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 73/158 (46%), Gaps = 9/158 (5%)

Query: 48   ALAYLKAVKDIFQDKREKYDDFLEVMKDFKA--QRIDTAGVIARVKELFKGHRDLILGFN 105
            A AYL  V++  Q    KY+DFL+V+ +F++  QR     +   ++ L +    L+  F 
Sbjct: 1631 AQAYLTRVREALQHIPGKYEDFLQVIYEFESSTQRQTAVDLYKSLQILLQEWPQLLKDFA 1690

Query: 106  TFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRK- 164
             FL     +   L +EQ        FE++  F+ +++  F  +   ++  + +L      
Sbjct: 1691 AFLLPEQALACGLFEEQ------QAFEKSRKFLRQLEICFAENPSHHQKIIKVLQGCADC 1744

Query: 165  ENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAAS 202
              + ITE+  ++  L + H  L +EF+ F      AAS
Sbjct: 1745 LPQEITELKTQMWQLLKGHDHLQDEFSVFFDHLRPAAS 1782


>gi|403293709|ref|XP_003937855.1| PREDICTED: GON-4-like protein isoform 1 [Saimiri boliviensis
            boliviensis]
          Length = 2239

 Score = 45.4 bits (106), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 73/158 (46%), Gaps = 9/158 (5%)

Query: 48   ALAYLKAVKDIFQDKREKYDDFLEVMKDFKA--QRIDTAGVIARVKELFKGHRDLILGFN 105
            A AYL  V++  Q    KY+DFL+V+ +F++  QR     +   ++ L +    L+  F 
Sbjct: 1631 AQAYLTRVREALQHIPGKYEDFLQVIYEFESSTQRQTAVDLYKSLQILLQEWPQLLKDFA 1690

Query: 106  TFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRK- 164
             FL     +   L +EQ        FE++  F+ +++  F  +   ++  + +L      
Sbjct: 1691 AFLLPEQALACGLFEEQ------QAFEKSRKFLRQLEICFAENPSHHQKIIKVLQGCADC 1744

Query: 165  ENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAAS 202
              + ITE+  ++  L + H  L +EF+ F      AAS
Sbjct: 1745 LPQEITELKTQMWQLLKGHDHLQDEFSVFFDHLRPAAS 1782


>gi|395729702|ref|XP_002810098.2| PREDICTED: GON-4-like protein isoform 1 [Pongo abelii]
          Length = 2241

 Score = 45.4 bits (106), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 73/158 (46%), Gaps = 9/158 (5%)

Query: 48   ALAYLKAVKDIFQDKREKYDDFLEVMKDFKA--QRIDTAGVIARVKELFKGHRDLILGFN 105
            A AYL  V++  Q    KY+DFL+V+ +F++  QR     +   ++ L +    L+  F 
Sbjct: 1632 AQAYLTRVREALQHIPGKYEDFLQVIYEFESSTQRQTAVDLYKSLQILLQDWPQLLKDFA 1691

Query: 106  TFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILN-MYRK 164
             FL     +   L +EQ        FE++  F+ +++  F  +   ++  + +L      
Sbjct: 1692 AFLLPEQALACGLFEEQ------QAFEKSRKFLRQLEICFAENPSHHQKIIKVLQGCADC 1745

Query: 165  ENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAAS 202
              + ITE+  ++  L + H  L +EF+ F      AAS
Sbjct: 1746 LPQEITELKTQMWQLLKGHDHLQDEFSIFFDHLRPAAS 1783


>gi|82830424|ref|NP_001032622.1| GON-4-like protein isoform a [Homo sapiens]
 gi|119573415|gb|EAW53030.1| gon-4-like (C.elegans), isoform CRA_b [Homo sapiens]
          Length = 2240

 Score = 45.4 bits (106), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 73/158 (46%), Gaps = 9/158 (5%)

Query: 48   ALAYLKAVKDIFQDKREKYDDFLEVMKDFKA--QRIDTAGVIARVKELFKGHRDLILGFN 105
            A AYL  V++  Q    KY+DFL+V+ +F++  QR     +   ++ L +    L+  F 
Sbjct: 1631 AQAYLTRVREALQHIPGKYEDFLQVIYEFESSTQRRTAVDLYKSLQILLQDWPQLLKDFA 1690

Query: 106  TFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRK- 164
             FL     +   L +EQ        FE++  F+ +++  F  +   ++  + +L      
Sbjct: 1691 AFLLPEQALACGLFEEQ------QAFEKSRKFLRQLEICFAENPSHHQKIIKVLQGCADC 1744

Query: 165  ENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAAS 202
              + ITE+  ++  L + H  L +EF+ F      AAS
Sbjct: 1745 LPQEITELKTQMWQLLKGHDHLQDEFSIFFDHLRPAAS 1782


>gi|108742074|gb|AAI17558.1| GON4L protein [Homo sapiens]
          Length = 1098

 Score = 45.4 bits (106), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 73/158 (46%), Gaps = 9/158 (5%)

Query: 48  ALAYLKAVKDIFQDKREKYDDFLEVMKDFKA--QRIDTAGVIARVKELFKGHRDLILGFN 105
           A AYL  V++  Q    KY+DFL+V+ +F++  QR     +   ++ L +    L+  F 
Sbjct: 827 AQAYLTRVREALQHIPGKYEDFLQVIYEFESSTQRRTAVDLYKSLQILLQDWPQLLKDFA 886

Query: 106 TFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILN-MYRK 164
            FL     +   L +EQ        FE++  F+ +++  F  +   ++  + +L      
Sbjct: 887 AFLLPEQALACGLFEEQ------QAFEKSRKFLRQLEICFAENPSHHQKIIKVLQGCADC 940

Query: 165 ENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAAS 202
             + ITE+  ++  L + H  L +EF+ F      AAS
Sbjct: 941 LPQEITELKTQMWQLLKGHDHLQDEFSIFFDHLRPAAS 978


>gi|84029264|sp|Q3T8J9.1|GON4L_HUMAN RecName: Full=GON-4-like protein; AltName: Full=GON-4 homolog
 gi|37703873|gb|AAR01260.1| GON4L isoform A [Homo sapiens]
 gi|37703875|gb|AAR01261.1| GON4L isoform C [Homo sapiens]
 gi|119573418|gb|EAW53033.1| gon-4-like (C.elegans), isoform CRA_e [Homo sapiens]
          Length = 2241

 Score = 45.4 bits (106), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 73/158 (46%), Gaps = 9/158 (5%)

Query: 48   ALAYLKAVKDIFQDKREKYDDFLEVMKDFKA--QRIDTAGVIARVKELFKGHRDLILGFN 105
            A AYL  V++  Q    KY+DFL+V+ +F++  QR     +   ++ L +    L+  F 
Sbjct: 1631 AQAYLTRVREALQHIPGKYEDFLQVIYEFESSTQRRTAVDLYKSLQILLQDWPQLLKDFA 1690

Query: 106  TFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRK- 164
             FL     +   L +EQ        FE++  F+ +++  F  +   ++  + +L      
Sbjct: 1691 AFLLPEQALACGLFEEQ------QAFEKSRKFLRQLEICFAENPSHHQKIIKVLQGCADC 1744

Query: 165  ENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAAS 202
              + ITE+  ++  L + H  L +EF+ F      AAS
Sbjct: 1745 LPQEITELKTQMWQLLKGHDHLQDEFSIFFDHLRPAAS 1782


>gi|139001812|dbj|BAF51556.1| YY1AP-related protein1 [Homo sapiens]
          Length = 2240

 Score = 45.4 bits (106), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 73/158 (46%), Gaps = 9/158 (5%)

Query: 48   ALAYLKAVKDIFQDKREKYDDFLEVMKDFKA--QRIDTAGVIARVKELFKGHRDLILGFN 105
            A AYL  V++  Q    KY+DFL+V+ +F++  QR     +   ++ L +    L+  F 
Sbjct: 1631 AQAYLTRVREALQHIPGKYEDFLQVIYEFESSTQRRTAVDLYKSLQILLQDWPQLLKDFA 1690

Query: 106  TFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRK- 164
             FL     +   L +EQ        FE++  F+ +++  F  +   ++  + +L      
Sbjct: 1691 AFLLPEQALACGLFEEQ------QAFEKSRKFLRQLEICFAENPSHHQKIIKVLQGCADC 1744

Query: 165  ENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAAS 202
              + ITE+  ++  L + H  L +EF+ F      AAS
Sbjct: 1745 LPQEITELKTQMWQLLKGHDHLQDEFSIFFDHLRPAAS 1782


>gi|426332148|ref|XP_004027054.1| PREDICTED: GON-4-like protein [Gorilla gorilla gorilla]
          Length = 2053

 Score = 45.1 bits (105), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 73/158 (46%), Gaps = 9/158 (5%)

Query: 48   ALAYLKAVKDIFQDKREKYDDFLEVMKDFKA--QRIDTAGVIARVKELFKGHRDLILGFN 105
            A AYL  V++  Q    KY+DFL+V+ +F++  QR     +   ++ L +    L+  F 
Sbjct: 1601 AQAYLTRVREALQHIPGKYEDFLQVIYEFESSTQRQTAVDLYKSLQILLQDWPQLLKDFA 1660

Query: 106  TFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRK- 164
             FL     +   L +EQ        FE++  F+ +++  F  +   ++  + +L      
Sbjct: 1661 AFLLPEQALACGLFEEQ------QAFEKSRKFLRQLEICFAENPSHHQKIIKVLQGCADC 1714

Query: 165  ENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAAS 202
              + ITE+  ++  L + H  L +EF+ F      AAS
Sbjct: 1715 LPQEITELKTQMWQLLKGHDHLQDEFSIFFDHLRPAAS 1752


>gi|351696654|gb|EHA99572.1| GON-4-like protein [Heterocephalus glaber]
          Length = 2134

 Score = 45.1 bits (105), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 72/158 (45%), Gaps = 9/158 (5%)

Query: 48   ALAYLKAVKDIFQDKREKYDDFLEVMKDFK--AQRIDTAGVIARVKELFKGHRDLILGFN 105
            A AYL  V++  Q    KY+DFL+V+ +F+  +QR     +   ++ L +    L+  F 
Sbjct: 1535 AQAYLTRVREALQHIPGKYEDFLQVIYEFESSSQRQTAVDLYKSLQILLRDWPQLLKDFA 1594

Query: 106  TFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRK- 164
             FL     +   L +EQ        FE++  F+ +++  F  +   ++  + +L      
Sbjct: 1595 AFLLPEQALACGLFEEQ------QAFEKSRKFLRQLEICFAENPSHHQKIIKVLQGCADC 1648

Query: 165  ENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAAS 202
                ITE+  ++  L + H  L +EF+ F      AAS
Sbjct: 1649 VPHEITELKTQMWQLLKGHDHLQDEFSIFFDHLRPAAS 1686


>gi|80474411|gb|AAI08378.1| 5830417I10Rik protein, partial [Mus musculus]
          Length = 2036

 Score = 45.1 bits (105), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 38/158 (24%), Positives = 73/158 (46%), Gaps = 9/158 (5%)

Query: 48   ALAYLKAVKDIFQDKREKYDDFLEVMKDFKA--QRIDTAGVIARVKELFKGHRDLILGFN 105
            A AYL  V++  Q    KY+DFL+++ +F++  Q      +   ++ L +    L+  F 
Sbjct: 1431 AQAYLTRVREALQHTPGKYEDFLQIIYEFESSTQMHSAVDLFKSLQTLLQDWPQLLKDFA 1490

Query: 106  TFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILN-MYRK 164
             FL     ++  L +EQ        FE++  F+ +++  F  +   ++  + +L      
Sbjct: 1491 AFLLPEQALSCGLFEEQ------QAFEKSRKFLRQLEICFAENPSHHQKIIKVLQGCADC 1544

Query: 165  ENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAAS 202
              + I E+  ++  LF+ H  L +EF+ F      AAS
Sbjct: 1545 LPQDIAELKTQMWQLFRGHDHLQDEFSIFFDHLRPAAS 1582


>gi|348579322|ref|XP_003475429.1| PREDICTED: LOW QUALITY PROTEIN: GON-4-like protein-like [Cavia
            porcellus]
          Length = 2184

 Score = 45.1 bits (105), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 72/158 (45%), Gaps = 9/158 (5%)

Query: 48   ALAYLKAVKDIFQDKREKYDDFLEVMKDFK--AQRIDTAGVIARVKELFKGHRDLILGFN 105
            A AYL  V++  Q    KY+DFL+V+ +F+  +QR     +   ++ L +    L+  F 
Sbjct: 1577 AQAYLTRVREALQHIPGKYEDFLQVLYEFESSSQRQTAVDLYKSLQILLQDWPQLLKDFA 1636

Query: 106  TFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRK- 164
             FL     +   L +EQ        FE++  F+ +++  F  +   ++  + +L      
Sbjct: 1637 AFLLPEQALACGLFEEQ------QAFEKSRKFLRQLEICFAENPSHHQKIIKVLQGCADC 1690

Query: 165  ENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAAS 202
                ITE+  ++  L + H  L +EF+ F      AAS
Sbjct: 1691 IPHEITELKTQMWQLLKGHDHLQDEFSIFFDHLRPAAS 1728


>gi|354478980|ref|XP_003501692.1| PREDICTED: GON-4-like protein-like [Cricetulus griseus]
          Length = 1818

 Score = 45.1 bits (105), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 39/158 (24%), Positives = 74/158 (46%), Gaps = 9/158 (5%)

Query: 48   ALAYLKAVKDIFQDKREKYDDFLEVMKDFKA--QRIDTAGVIARVKELFKGHRDLILGFN 105
            A AYL  V++  Q    KY+DFL+V+ +F++  QR     +   ++ L +    L+  F 
Sbjct: 1212 AQAYLTRVREALQHVPGKYEDFLQVIYEFESSTQRHTAVDLYKSLQTLLQDWPQLLKDFA 1271

Query: 106  TFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILN-MYRK 164
             FL     ++  L +EQ        FE++  F+ +++  F  +   ++  + +L      
Sbjct: 1272 AFLLPEQALSCGLFEEQ------QAFEKSRKFLRQLEICFAENPTHHQKIIKVLQGCADC 1325

Query: 165  ENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAAS 202
              + I+E+  ++  L + H  L +EF+ F      AAS
Sbjct: 1326 LPQDISELKTQMWQLLKGHDHLQDEFSIFFDHLRPAAS 1363


>gi|102139906|gb|ABF70055.1| hypothetical protein MA4_54N07.40 [Musa acuminata]
          Length = 155

 Score = 45.1 bits (105), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 52/106 (49%), Gaps = 27/106 (25%)

Query: 90  VKELFKGHRDLILGFNTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDD 149
           +K +F G+ +L+  FN+FL +                 PV FEE+++FV K+K R   D 
Sbjct: 4   MKIVFTGNPNLMFDFNSFLSRW---------------NPVTFEESLDFVKKVKAR---DY 45

Query: 150 HVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLP 195
            +Y S  DIL+   ++ ++  E+Y        DH DL +E   F P
Sbjct: 46  QLYLSLSDILS---QKEQTPPEIYH------NDHDDLCKELMRFKP 82


>gi|449531854|ref|XP_004172900.1| PREDICTED: paired amphipathic helix protein Sin3-like 3-like [Cucumis
            sativus]
          Length = 492

 Score = 44.7 bits (104), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 27/54 (50%), Positives = 33/54 (61%), Gaps = 4/54 (7%)

Query: 975  MTEGAKILRYNAESVKQFKIEREEGELSPNGDFEEDNFAVYGESGLEAVHKAKD 1028
            M EG+    +N +     KIEREEGELSP G+  EDNF+ Y E  L+   KAKD
Sbjct: 1    MAEGSNAPSFNEKCDGHSKIEREEGELSPTGEL-EDNFSNYQEGSLD---KAKD 50


>gi|393214201|gb|EJC99694.1| hypothetical protein FOMMEDRAFT_160119 [Fomitiporia mediterranea
           MF3/22]
          Length = 163

 Score = 44.3 bits (103), Expect = 0.33,   Method: Composition-based stats.
 Identities = 24/69 (34%), Positives = 37/69 (53%)

Query: 44  TTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILG 103
           T  D + +++ VK  F+D  E Y  FL V+ +   +RI     I R+  LF GH D++  
Sbjct: 23  TIKDGIDFVEVVKACFKDAPEVYSAFLSVLHERWWRRITELEEIRRILALFWGHGDILRR 82

Query: 104 FNTFLPKGY 112
           +N FL + Y
Sbjct: 83  YNDFLHEVY 91


>gi|330818983|ref|XP_003291546.1| hypothetical protein DICPUDRAFT_82214 [Dictyostelium purpureum]
 gi|325078284|gb|EGC31944.1| hypothetical protein DICPUDRAFT_82214 [Dictyostelium purpureum]
          Length = 125

 Score = 44.3 bits (103), Expect = 0.36,   Method: Composition-based stats.
 Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 3/63 (4%)

Query: 136 NFVNKIKTRFQGDDHVYKSFLDILNMY--RKENKSITEVYQEVEALFQD-HPDLLEEFTH 192
           +++N +K RF  D   YK+F  IL  Y    +N    +VY EV  LF D H DLL +  +
Sbjct: 59  HYLNNVKIRFIDDPISYKTFEIILKEYFSNPQNIHYQDVYNEVALLFNDNHQDLLNQLAY 118

Query: 193 FLP 195
           FLP
Sbjct: 119 FLP 121


>gi|409075275|gb|EKM75657.1| hypothetical protein AGABI1DRAFT_132047 [Agaricus bisporus var.
           burnettii JB137-S8]
          Length = 152

 Score = 44.3 bits (103), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 37/55 (67%), Gaps = 2/55 (3%)

Query: 48  ALAYLKAVKD--IFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDL 100
           +L +++ VK+     +K E YD+F+++M++F  QRI+TAGV  ++ ++F    DL
Sbjct: 43  SLGFIETVKNRSAKDNKPEVYDEFIQLMQEFHLQRINTAGVTEKINQIFNNWPDL 97


>gi|443687110|gb|ELT90192.1| hypothetical protein CAPTEDRAFT_225306 [Capitella teleta]
          Length = 110

 Score = 44.3 bits (103), Expect = 0.39,   Method: Composition-based stats.
 Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 5/70 (7%)

Query: 48  ALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQR-----IDTAGVIARVKELFKGHRDLIL 102
           AL Y++ +K     +      FLE+ K+ K+ R     ID A ++ R+K+LFK H  LI 
Sbjct: 34  ALRYVELLKVHLAKQPHIQAQFLEIAKELKSPRQQNEAIDYADILKRMKDLFKDHPQLIP 93

Query: 103 GFNTFLPKGY 112
           G   FLP G+
Sbjct: 94  GLEIFLPPGW 103


>gi|255971126|ref|ZP_05421712.1| predicted protein [Enterococcus faecalis T1]
 gi|255962144|gb|EET94620.1| predicted protein [Enterococcus faecalis T1]
          Length = 324

 Score = 43.5 bits (101), Expect = 0.66,   Method: Composition-based stats.
 Identities = 42/148 (28%), Positives = 61/148 (41%), Gaps = 18/148 (12%)

Query: 75  DFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITL-PL------EDEQPPPKK 127
           DF A+R++ AG+     E F  H   IL F    P   ++ L PL      ED  P    
Sbjct: 90  DFWAERLEQAGICHYGMETFNQHP--ILRFEA--PDNTQMALVPLREFENAEDYFPAEHS 145

Query: 128 PVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLL 187
            +  E AI  ++ I+ R Q      +  +D L+ + KE     E   EV  L   HP   
Sbjct: 146 EIPVEHAILGIDAIQLRVQYAAATKQPLVDYLHWHEKETVPFFETAHEVTVLENHHPQFY 205

Query: 188 EEFTHFLPDSS------GAASIHYVPSG 209
           +E  H + D +      G   +H+V  G
Sbjct: 206 QE-VHIIDDRTNPLAIEGIGGVHHVAFG 232


>gi|294947734|ref|XP_002785467.1| hypothetical protein Pmar_PMAR005785 [Perkinsus marinus ATCC 50983]
 gi|239899378|gb|EER17263.1| hypothetical protein Pmar_PMAR005785 [Perkinsus marinus ATCC 50983]
          Length = 751

 Score = 43.5 bits (101), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 20/68 (29%), Positives = 39/68 (57%), Gaps = 4/68 (5%)

Query: 642 LPVILTRLKQKQEEWARCRSDF----NKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAK 697
           LP+++TRLK+ +       S      +K W ++  ++Y   LDHRS+YF+   SK+  ++
Sbjct: 304 LPLLVTRLKETEASLTSPTSGLVAAASKAWLKVDKRSYLPGLDHRSYYFRGHCSKNSTSR 363

Query: 698 ALSAEIKE 705
           A   ++++
Sbjct: 364 AFLTDLRQ 371


>gi|157119789|ref|XP_001659507.1| hypothetical protein AaeL_AAEL008796 [Aedes aegypti]
 gi|108875160|gb|EAT39385.1| AAEL008796-PA [Aedes aegypti]
          Length = 800

 Score = 43.1 bits (100), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 84/186 (45%), Gaps = 31/186 (16%)

Query: 37  GGGAQKLTTNDALAYLKAVK--DIFQDK-REKYDDFLEVMKDFKAQRIDTAGVIARVKEL 93
           G G ++LT  D  + +K VK  ++ + K +EK  +  +   D   + ID   +   V+++
Sbjct: 160 GKGQKRLT--DYFSTVKGVKADELRKTKLKEKLWEIYQRFCDSCIEGIDVGSLGRLVRKV 217

Query: 94  FKGHRDLILGFNTFLPKGYEITLPLE----DEQPPPKKPVEFEE---------------- 133
           F  H  LI GF+ FL K  E++        D+     +P    E                
Sbjct: 218 FD-HFRLIEGFSYFLGKLQEMSYSHSSKKVDQIVTKSEPFAVNEMDSRGHRSSECEHRDA 276

Query: 134 --AINFVNKIK-TRFQGDDH-VYKSFLDILNMYRKENKSITEVYQEVE-ALFQDHPDLLE 188
             A NF  K++ T    + H +Y+ FLDIL  +      + ++Y ++E  L  DHP+L++
Sbjct: 277 NFAYNFFEKVEETLLTENKHSMYERFLDILQSFNATEDRVPDLYHKIENLLLTDHPELVD 336

Query: 189 EFTHFL 194
            F  FL
Sbjct: 337 MFLTFL 342


>gi|302696425|ref|XP_003037891.1| hypothetical protein SCHCODRAFT_102574 [Schizophyllum commune H4-8]
 gi|300111588|gb|EFJ02989.1| hypothetical protein SCHCODRAFT_102574, partial [Schizophyllum
           commune H4-8]
          Length = 185

 Score = 43.1 bits (100), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 2/71 (2%)

Query: 40  AQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRD 99
           AQK+   DA  +   V+  F D+ E+Y  F ++M   +   ++  G+  R  ++F GH D
Sbjct: 27  AQKVI--DAATFADLVRTSFADEPERYRQFFDMMLWHERHPLNVKGLGHRAMQVFAGHPD 84

Query: 100 LILGFNTFLPK 110
           LI G     PK
Sbjct: 85  LISGLRVVCPK 95


>gi|440797062|gb|ELR18157.1| DNA repair helicase (rad3) subfamily protein [Acanthamoeba
           castellanii str. Neff]
          Length = 1026

 Score = 42.4 bits (98), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 9/97 (9%)

Query: 43  LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHR--DL 100
           +T ++A AY++ VK       ++Y  F   ++DF+ ++I+ A ++ RV++LF G +   L
Sbjct: 856 VTASEAQAYIRRVKGCLSP--DEYKTFQSTLRDFRGKQIELAELMERVQQLFSGSQRYPL 913

Query: 101 ILGFNTFLP----KGYEITLPLEDEQPPPKKPVEFEE 133
           +  F  F+P      Y   LP E  +  P +P   EE
Sbjct: 914 LRDFVAFVPPRHRATYLAMLPQEPTEDLP-QPAASEE 949


>gi|326513692|dbj|BAJ87865.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 174

 Score = 41.2 bits (95), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 46/78 (58%), Gaps = 6/78 (7%)

Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDL 186
           +PV FEE+++FV ++K R       Y  +L +LN+  + ++   E Y E+  LF+DH DL
Sbjct: 65  EPVTFEESLSFVKRVKAR------DYLLYLSLLNVLTRSDQIPLEAYNELLLLFRDHGDL 118

Query: 187 LEEFTHFLPDSSGAASIH 204
           LEE   F P  +  ++++
Sbjct: 119 LEELGKFRPLPNFPSTVY 136


>gi|330794091|ref|XP_003285114.1| hypothetical protein DICPUDRAFT_91437 [Dictyostelium purpureum]
 gi|325084940|gb|EGC38357.1| hypothetical protein DICPUDRAFT_91437 [Dictyostelium purpureum]
          Length = 121

 Score = 40.8 bits (94), Expect = 3.7,   Method: Composition-based stats.
 Identities = 21/78 (26%), Positives = 45/78 (57%), Gaps = 2/78 (2%)

Query: 120 DEQPPPKKPVE-FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEA 178
           +E     KP++  ++ I F +K++ +FQ    VY+  ++ +    K+ K++++VY ++  
Sbjct: 16  EESITKNKPIDKLKKYIIFFDKVEQKFQHQPEVYRKVINTIKEC-KDKKNLSKVYSQILK 74

Query: 179 LFQDHPDLLEEFTHFLPD 196
           L Q+ P+L+ EF    P+
Sbjct: 75  LIQNEPELINEFNGLFPE 92


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.313    0.131    0.375 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,588,782,601
Number of Sequences: 23463169
Number of extensions: 741919776
Number of successful extensions: 2894980
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1027
Number of HSP's successfully gapped in prelim test: 4044
Number of HSP's that attempted gapping in prelim test: 2742936
Number of HSP's gapped (non-prelim): 95636
length of query: 1031
length of database: 8,064,228,071
effective HSP length: 153
effective length of query: 878
effective length of database: 8,769,330,510
effective search space: 7699472187780
effective search space used: 7699472187780
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 82 (36.2 bits)