BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001681
(1031 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O04539|SNL4_ARATH Paired amphipathic helix protein Sin3-like 4 OS=Arabidopsis thaliana
GN=SNL4 PE=3 SV=3
Length = 1326
Score = 1073 bits (2774), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 584/1000 (58%), Positives = 718/1000 (71%), Gaps = 78/1000 (7%)
Query: 36 GGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFK 95
GG AQKLTTNDALAYLKAVKD FQDKR+KYD+FLEVMKDFKAQR+DT GVI RVKELFK
Sbjct: 3 GGSSAQKLTTNDALAYLKAVKDKFQDKRDKYDEFLEVMKDFKAQRVDTTGVILRVKELFK 62
Query: 96 GHRDLILGFNTFLPKGYEITLPLEDEQPP-PKKPVEFEEAINFVNKIKTRFQGDDHVYKS 154
G+R+LILGFNTFLPKG+EITL ED+QP PKKPVEFEEAI+FVNKIKTRFQGDD VYKS
Sbjct: 63 GNRELILGFNTFLPKGFEITLRPEDDQPAAPKKPVEFEEAISFVNKIKTRFQGDDRVYKS 122
Query: 155 FLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIH---YVPSGRN 211
FLDILNMYRKENKSITEVY EV LF+DH DLL EFTHFLPD+S AS + VP
Sbjct: 123 FLDILNMYRKENKSITEVYHEVAILFRDHHDLLGEFTHFLPDTSATASTNDSVKVP---- 178
Query: 212 SILRDRS-SAMPTARQVHVDKKERAMASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEK 270
+RDR ++PT RQ+ +DKK+R + SH +R L + D DH+R LLK K++ RR +K
Sbjct: 179 --VRDRGIKSLPTMRQIDLDKKDRIITSHPNRALKTENMDVDHERSLLKDSKEEVRRIDK 236
Query: 271 ERERRDDHRRERERDDRDFENDVNRDFSMQRFPHKRKSARKIEDSTAEPLHQGGEGDENF 330
+ + DD R +D R ++D +++ F K+K RK +D +AE Q EGD+
Sbjct: 237 KNDFMDDRDR---KDYRGLDHDSHKE---HFFNSKKKLIRK-DDDSAEMSDQAREGDKFS 289
Query: 331 GMHPVSSSYDDKNAMKSMFSQELSFCEKVKDKL-RDDYQEFLRCLHLYTKEIITRSELQS 389
G P SS+YD+K SQEL+F ++VK KL D QEFLRCL+LY+KEII++ ELQS
Sbjct: 290 GAIPSSSTYDEKG-----HSQELAFVDRVKAKLDTADNQEFLRCLNLYSKEIISQPELQS 344
Query: 390 LVGDLLGRYPDLMDGFNGFLARCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDR 449
LV DL+G YPDLMD F FLA+C+K++ LL+ ++SKKSLW+EG+ P+ K D+D DR+R
Sbjct: 345 LVSDLIGVYPDLMDAFKVFLAQCDKNDGLLSGIVSKKSLWSEGKCPQPTKSLDKDTDRER 404
Query: 450 ERDDGVKDRDREAREKDRLDKSVAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCT 509
E+ + ++RDRE K+RL+K A + AKPI ELDLSNCE+CT
Sbjct: 405 EKIERYRERDRE---KERLEKVAA----------------SQKWAKPISELDLSNCEQCT 445
Query: 510 PSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDD 569
PSYR LPKNY IP ASQ+ E+G++VLNDHWVSVTSGSEDYSFKHMRKNQYEESLF+CEDD
Sbjct: 446 PSYRRLPKNYPIPIASQKMEIGSQVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFKCEDD 505
Query: 570 RFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFTALNLRCIERLYGDHGLD 629
RFELDMLLESV T RVEELL KIN+N +KTD PI +EDH TALNLRCIERLY DHGLD
Sbjct: 506 RFELDMLLESVISATNRVEELLAKINSNELKTDTPICIEDHLTALNLRCIERLYSDHGLD 565
Query: 630 VMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQ 689
V+D+L+KNA LALPVILTRLKQKQEEWARCR++FNKVWA+IY+KNYH+SLDHRSFYFKQQ
Sbjct: 566 VLDLLKKNAYLALPVILTRLKQKQEEWARCRTEFNKVWADIYTKNYHRSLDHRSFYFKQQ 625
Query: 690 DSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLI 749
DSK+L KAL AEIKEISEKKR EDD LLA+AAGNRR+I ++ F+Y DPD+HEDLYQLI
Sbjct: 626 DSKNLSTKALLAEIKEISEKKRGEDDALLALAAGNRRTISSNMSFDYPDPDLHEDLYQLI 685
Query: 750 KYSCGEMCTTEQLDKVMKIWTTFLEPMLGVPSRPQGAEDTEDVVKAKSHTVKSRAASVGD 809
KYSCGEMC+TEQLDKVMK+WT FLEP+ GVPSRPQGAED ED VK+ +H + + +V
Sbjct: 686 KYSCGEMCSTEQLDKVMKVWTEFLEPIFGVPSRPQGAEDREDAVKSTNHDREDQEDAV-- 743
Query: 810 SDGSPDGDAAAMTSKHSNPSRNGDESIPPEQSSSSRAWLPNGDHGIKEDVSVEADHNARK 869
SP A+ S SN R +ES Q+S + +DV+ +A
Sbjct: 744 ---SPQNGASIANSMRSNGPRKVNESNQVRQASE-----------LDKDVTSSKTSDALL 789
Query: 870 SDNFCDSSEQDKVQNNAAMADETSGISKQASTNERLIGTNA-AIAAAADQSNGRSNIENT 928
S CD+++ DK+ N DE + +KQA + ER +NA + Q NG+ + +
Sbjct: 790 S---CDNTQNDKMPKNLTTPDERAE-TKQAVSIERAHNSNALPLDGLLPQRNGKISSLSV 845
Query: 929 SGLSVAHSRPGNHIVEGGLELRSSNEILPSSEGGECSRQNISTNGVMTEGAKILRYNAES 988
+GLS ++ +P + G EL+ P+ G R I N V+ G + E+
Sbjct: 846 AGLSNSNPKPA--LTSGTEELK------PNYVNG--PRVEIGDNPVIPNGTVAEWFAGEA 895
Query: 989 VKQFKIEREEGELSPNGDFEEDNFAVYGESGLEAVHKAKD 1028
K+EREEGELSP GDFEEDN+AV+GE+ +EA+ K+K+
Sbjct: 896 ----KVEREEGELSPTGDFEEDNYAVHGENDMEALSKSKE 931
>sp|O48686|SNL3_ARATH Paired amphipathic helix protein Sin3-like 3 OS=Arabidopsis thaliana
GN=SNL3 PE=1 SV=3
Length = 1330
Score = 1048 bits (2709), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 586/999 (58%), Positives = 706/999 (70%), Gaps = 83/999 (8%)
Query: 36 GGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFK 95
GGG AQKLTTNDALAYLKAVKD FQD+R KYD+FLEVMK+FK+QR+DTAGVI RVKELFK
Sbjct: 3 GGGSAQKLTTNDALAYLKAVKDKFQDQRGKYDEFLEVMKNFKSQRVDTAGVITRVKELFK 62
Query: 96 GHRDLILGFNTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSF 155
GH++LILGFNTFLPKG+EITL ED QPP KK VEFEEAI+FVNKIKTRFQGDD VYKSF
Sbjct: 63 GHQELILGFNTFLPKGFEITLQPEDGQPPLKKRVEFEEAISFVNKIKTRFQGDDRVYKSF 122
Query: 156 LDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILR 215
LDILNMYR+++KSITEVYQEV LF+DH DLL EFTHFLPD+S ASI PS + S+ R
Sbjct: 123 LDILNMYRRDSKSITEVYQEVAILFRDHSDLLVEFTHFLPDTSATASI---PSVKTSV-R 178
Query: 216 DRSSAMPTARQVHVDKKERAMASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERR 275
+R ++ DKK+R + H D D + D D +R + K +K+ R KE E R
Sbjct: 179 ERGVSL-------ADKKDRIITPHPDHDYGTEHIDQDRERPIKKENKEHMRGTNKENEHR 231
Query: 276 DDHRRERERDDRDFENDVNRDFSMQRFPHKRKSARKIEDSTAEPLHQGGEGDENFGMHPV 335
D RDFE + ++F +K++ D AE +Q G P
Sbjct: 232 DA---------RDFEPHSKK----EQFLNKKQKLHIRGDDPAEISNQSKLS----GAVPS 274
Query: 336 SSSYDDKNAMKSMFSQELSFCEKVKDKLR-DDYQEFLRCLHLYTKEIITRSELQSLVGDL 394
SS+YD+K AMKS +SQ+L+ ++VK+KL +YQEFLRCL+L++KEII+R ELQSLVG+L
Sbjct: 275 SSTYDEKGAMKS-YSQDLAIVDRVKEKLNASEYQEFLRCLNLFSKEIISRPELQSLVGNL 333
Query: 395 LGRYPDLMDGFNGFLARCEKSEELLADVMSKKS----LWNEGRIPKSVKVEDRDRDRDRE 450
+G YPDLMD F FL +CEK+E LL+ +++K L EG+ P+ D DRD++ +
Sbjct: 334 IGVYPDLMDSFIEFLVQCEKNEGLLSGILTKSKSTYLLQGEGKYPQPSL--DNDRDQEHK 391
Query: 451 RDDGVKDRDREAREKDRLDKSVAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTP 510
RDDG++DRD E K+RL+K+ A + AKPI ELDLSNCE+CTP
Sbjct: 392 RDDGLRDRDHE---KERLEKAAANLK----------------WAKPISELDLSNCEQCTP 432
Query: 511 SYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDR 570
SYRLLPKNY I ASQ+TE+G VLNDHWVSVTSGSEDYSF HMRKNQYEESLF+CEDDR
Sbjct: 433 SYRLLPKNYPISIASQKTEIGKLVLNDHWVSVTSGSEDYSFSHMRKNQYEESLFKCEDDR 492
Query: 571 FELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFTALNLRCIERLYGDHGLDV 630
FELDMLLESVN TTK VEELL KIN+N +KT+ PIRVEDH TALNLRCIERLYGDHGLDV
Sbjct: 493 FELDMLLESVNSTTKHVEELLTKINSNELKTNSPIRVEDHLTALNLRCIERLYGDHGLDV 552
Query: 631 MDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQD 690
MDVL+KN SLALPVILTRLKQKQEEWARCRSDF+KVWAEIY+KNY+KSLDHRSFYFKQQD
Sbjct: 553 MDVLKKNVSLALPVILTRLKQKQEEWARCRSDFDKVWAEIYAKNYYKSLDHRSFYFKQQD 612
Query: 691 SKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLIK 750
SK L KAL AEIKEI+EKKR EDD LLA AAGNR SI P LEF+Y D D+HEDLYQLIK
Sbjct: 613 SKKLSMKALLAEIKEITEKKR-EDDSLLAFAAGNRLSISPDLEFDYPDHDLHEDLYQLIK 671
Query: 751 YSCGEMCTTEQLDKVMKIWTTFLEPMLGVPSRPQGAEDTEDVVKAKSHTVKSRAASVGDS 810
YSC EMC+TEQLDKVMKIWTTF+E + GVPSRPQGAED EDVVK+ + VKS ++S G+S
Sbjct: 672 YSCAEMCSTEQLDKVMKIWTTFVEQIFGVPSRPQGAEDQEDVVKSMNQNVKSGSSSAGES 731
Query: 811 DGSPDGDAAAMTSKHSNPSRNGDESIPPEQSSSSRAWLPNGDHGIKEDVSVEADHNARKS 870
+GSP A+ S+ S SR +E Q+S+S +G G R S
Sbjct: 732 EGSPHNYASVADSRRSKSSRKANEHSQLGQTSNSER---DGAAG-------------RTS 775
Query: 871 DNFCDSSEQDKVQNNAAMADETSGISKQASTNERLIGTNA-AIAAAADQSNGRSNIENTS 929
D C++++ +K+ N +DE SKQA + ER + A A+ DQSNG S+I + +
Sbjct: 776 DALCETAQHEKMLKNVVTSDEKPE-SKQAVSIERAHDSTALAVDGLLDQSNGGSSIVHMT 834
Query: 930 GLSVAHSRPGNHIVEGGLELRSSNEILPSSEGGECSRQNISTNGVMTEGAKILRYNAESV 989
G + +P E LEL+ ++ P E G + + TNG+ E + + E
Sbjct: 835 GHCNNNLKPVTCGTE--LELKMNDGNGPKLEVG---NKKLLTNGIAVE----ITSDQEMA 885
Query: 990 KQFKIEREEGELSPNGDFEEDNFAVYGESGLEAVHKAKD 1028
K+EREEGELSPNGDFEEDNFAVY ++ E KA D
Sbjct: 886 GTSKVEREEGELSPNGDFEEDNFAVYAKTDFETFSKAND 924
>sp|Q9LFQ3|SNL2_ARATH Paired amphipathic helix protein Sin3-like 2 OS=Arabidopsis thaliana
GN=SNL2 PE=1 SV=2
Length = 1367
Score = 910 bits (2351), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/1040 (49%), Positives = 675/1040 (64%), Gaps = 90/1040 (8%)
Query: 1 MKRSRDEVYMN-SQIKRPMISSRGEPSGQT----QVVGGGGGGGAQKLTTNDALAYLKAV 55
MKR RD++Y SQ KRP+ SSRGE Q+ G GG QKLTT+DAL YLK V
Sbjct: 1 MKRIRDDIYATGSQFKRPLGSSRGESYEQSPITGGGSIGEGGINTQKLTTDDALTYLKEV 60
Query: 56 KDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEIT 115
K++FQD+R+KYD FLEVMKDFKAQ+ DT+GVI+RVKELFKGH +LI GFNTFLPKG+EIT
Sbjct: 61 KEMFQDQRDKYDMFLEVMKDFKAQKTDTSGVISRVKELFKGHNNLIFGFNTFLPKGFEIT 120
Query: 116 LPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQE 175
L +D + P KK VEFEEAI+FVNKIKTRFQ ++ VYKSFL+ILNMYRK+NK ITEVY E
Sbjct: 121 L--DDVEAPSKKTVEFEEAISFVNKIKTRFQHNELVYKSFLEILNMYRKDNKDITEVYNE 178
Query: 176 VEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQVHVDK---K 232
V LF+DH DLLEEFT FLPDS + + + DR S P R++ ++K +
Sbjct: 179 VSTLFEDHSDLLEEFTRFLPDSLAPHTEAQLLRSQAQRYDDRGSGPPLVRRMFMEKDRRR 238
Query: 233 ERAMASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERRDDHRRERERDDRDFEND 292
ER +AS DRD SVDR D + D+ ++K +DQR+R +K+ RER RD E+
Sbjct: 239 ERTVASRGDRDHSVDRSDLNDDKSMVKMHRDQRKRVDKDN---------RERRSRDLEDG 289
Query: 293 VNRDFSMQRFPHKRKSARKIEDSTAEPLHQGGEGDENFGMHPVSSSYDDKNAMKSMFSQE 352
++Q F KRKS+R++E F + +S+ +KN +KSM++Q
Sbjct: 290 EAEQDNLQHFSEKRKSSRRME---------------GFEAYSGPASHSEKNNLKSMYNQA 334
Query: 353 LSFCEKVKDKL--RDDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLA 410
FCEKVK++L +DDYQ FL+CL++++ II R +LQ+LV D+LG++PDLMD FN F
Sbjct: 335 FLFCEKVKERLCSQDDYQAFLKCLNMFSNGIIQRKDLQNLVSDVLGKFPDLMDEFNQFFE 394
Query: 411 RCEKSEEL--LADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRL 468
RCE + LA VMSKKSL +E + +SVK E++DR+ R+ + A+EK+R
Sbjct: 395 RCESIDGFQHLAGVMSKKSLGSEENLSRSVKGEEKDREHKRDVE--------AAKEKER- 445
Query: 469 DKSVAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRT 528
SKDKY+ K IQELDLS+CERCTPSYRLLP +Y IPS R
Sbjct: 446 -------------------SKDKYMGKSIQELDLSDCERCTPSYRLLPPDYPIPSVRHRQ 486
Query: 529 ELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVE 588
+ GA VLNDHWVSVTSGSEDYSFKHMR+NQYEESLFRCEDDRFELDMLLESV K E
Sbjct: 487 KSGAAVLNDHWVSVTSGSEDYSFKHMRRNQYEESLFRCEDDRFELDMLLESVGSAAKSAE 546
Query: 589 ELLEKINNNTIKTDGPIRVEDHFTALNLRCIERLYGDHGLDVMDVLRKNASLALPVILTR 648
ELL I + I +G R+EDHFTALNLRCIERLYGDHGLDV D++RKN + ALPVILTR
Sbjct: 547 ELLNIIIDKKISFEGSFRIEDHFTALNLRCIERLYGDHGLDVTDLIRKNPAAALPVILTR 606
Query: 649 LKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISE 708
LKQKQ+EW +CR FN VWA++Y+KN++KSLDHRSFYFKQQDSK+L AKAL +E+K++ E
Sbjct: 607 LKQKQDEWTKCREGFNVVWADVYAKNHYKSLDHRSFYFKQQDSKNLSAKALVSEVKDLKE 666
Query: 709 KKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLIKYSCGEMCTT-EQLDKVMK 767
K +KEDDV+L+I+AG R+ I+PHLE++Y D IHEDL++L+++SC E+C+T EQ KV+K
Sbjct: 667 KSQKEDDVVLSISAGYRQPIIPHLEYDYLDRAIHEDLFKLVQFSCEEICSTKEQTGKVLK 726
Query: 768 IWTTFLEPMLGVPSRPQGAEDTEDVVKAKSHTVKSRAASVGDSDGSPDGDAAAMTSKHSN 827
+W FLE ML V R +G++ EDVV+ T RA + G+++ S DA ++ S+
Sbjct: 727 LWANFLELMLDVAPRAKGSDSVEDVVE----TQHQRAFTSGEANES--SDAISLVSRQLK 780
Query: 828 PSRNGDESIPPEQSSSSRAWLPNGDHGIKEDVSVEADHNARKSDNFCDSSEQDKVQNNAA 887
+ NGD S L N D KE++ + D + + ++D+ N A
Sbjct: 781 FATNGDVHASSGVSKHGETGLLNRDSSGKENLK-DGDLANKDVATCAEKPQKDQEIGNGA 839
Query: 888 MADETSGISKQASTNERLIGTNAAIAAAADQSNGRSNIENTSGLSVAHSRPGNHIVEGGL 947
+ +ER+ ++++ + + +NG+ ++SG S+P I
Sbjct: 840 A-------KRSGDVDERVATSSSSFPSGVENNNGKVGSRDSSGSRGILSKPSEAI----- 887
Query: 948 ELRSSNEILPSSEGGECSRQNISTNGVMTEGAKILRYNAESVKQFKIEREEGELSPNGDF 1007
+ + ++G + R + NG+ ++ +K ES KIE+EEGELSP GD
Sbjct: 888 ---DKVDSIQHTQGVDIGRIIVLGNGLQSDTSKANSNYDESGGPSKIEKEEGELSPVGD- 943
Query: 1008 EEDNFAVYGESGLEAVHKAK 1027
EDNF VY + L+A K +
Sbjct: 944 SEDNFVVYEDRELKATAKTE 963
>sp|Q9SRH9|SNL1_ARATH Paired amphipathic helix protein Sin3-like 1 OS=Arabidopsis thaliana
GN=SNL1 PE=1 SV=2
Length = 1372
Score = 899 bits (2324), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 512/1053 (48%), Positives = 681/1053 (64%), Gaps = 90/1053 (8%)
Query: 1 MKRSRDEVYMN-SQIKRPMISSRGEPSGQTQVVGGGGGGG---------AQKLTTNDALA 50
MKR RD+VY + SQ +RP+ SSRG+ GQ+ V G G +QKLTTNDAL+
Sbjct: 1 MKRIRDDVYASGSQFRRPLGSSRGQLCGQSPVHGSGDTEEEEEGGSRRVSQKLTTNDALS 60
Query: 51 YLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPK 110
YL+ VK++FQD+REKYD FLEVMKDFKAQR DT GVIARVKELFKGH +LI GFNTFLPK
Sbjct: 61 YLREVKEMFQDQREKYDRFLEVMKDFKAQRTDTGGVIARVKELFKGHNNLIYGFNTFLPK 120
Query: 111 GYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSIT 170
GYEITL +E++ PKK VEFE+AINFVNKIK RF+ D+HVYKSFL+ILNMYRKENK I
Sbjct: 121 GYEITL-IEEDDALPKKTVEFEQAINFVNKIKMRFKHDEHVYKSFLEILNMYRKENKEIK 179
Query: 171 EVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQVHVD 230
EVY EV LFQ H DLLE+FT FLP S + S + DR S P Q+ V+
Sbjct: 180 EVYNEVSILFQGHLDLLEQFTRFLPASLPSHSAAQHSRSQAQQYSDRGSDPPLLHQMQVE 239
Query: 231 K---KERAMASHADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERRDDHRRERERDDR 287
K +ERA+A D SV+R D + D+ ++K ++QR+R +KE + RR R+ DDR
Sbjct: 240 KERRRERAVALRGD--YSVERYDLNDDKTMVKIQREQRKRLDKE----NRARRGRDLDDR 293
Query: 288 DFENDVNRDFSMQRFPHKRKSARKIEDSTAEPLHQGGEGDENFGMHPVSSSYDDKNAMKS 347
+ D ++ FP KRKS+R+ E A + S+S+ +K+ +KS
Sbjct: 294 EAGQD-----NLHHFPEKRKSSRRAEALEA---------------YSGSASHSEKDNLKS 333
Query: 348 MFSQELSFCEKVKDKL--RDDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGF 405
M+ Q FCEKVKD+L +DDYQ FL+CL++++ II R +LQ+LV DLLG++PDLMD F
Sbjct: 334 MYKQAFVFCEKVKDRLCSQDDYQTFLKCLNIFSNGIIQRKDLQNLVSDLLGKFPDLMDEF 393
Query: 406 NGFLARCEKSE---ELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREA 462
N F RCE + LA VMSKK +E ++ + +KVE+++ + E + VK+ ++
Sbjct: 394 NQFFERCESITDGFQRLAGVMSKKLFSSEEQLSRPMKVEEKESEHKPELE-AVKETEQ-- 450
Query: 463 REKDRLDKSVAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIP 522
K +Y+ K IQELDLS+CE CTPSYRLLP +Y IP
Sbjct: 451 -------------------------CKKEYMGKSIQELDLSDCECCTPSYRLLPADYPIP 485
Query: 523 SASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNV 582
ASQR+ELGAEVLNDHWVSVTSGSEDYSFKHMR+NQYEESLFRCEDDRFELDMLLESV+
Sbjct: 486 IASQRSELGAEVLNDHWVSVTSGSEDYSFKHMRRNQYEESLFRCEDDRFELDMLLESVSS 545
Query: 583 TTKRVEELLEKINNNTIKTDGPIRVEDHFTALNLRCIERLYGDHGLDVMDVLRKNASLAL 642
+ E LL I I G R+EDHFTALNLRCIERLYGDHGLDV+D+L KN + AL
Sbjct: 546 AARSAESLLNIITEKKISFSGSFRIEDHFTALNLRCIERLYGDHGLDVIDILNKNPATAL 605
Query: 643 PVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAE 702
PVILTRLKQKQ EW +CR DF+KVWA +Y+KN++KSLDHRSFYFKQQDSK+L AK+L AE
Sbjct: 606 PVILTRLKQKQGEWKKCRDDFDKVWANVYAKNHYKSLDHRSFYFKQQDSKNLSAKSLLAE 665
Query: 703 IKEISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLIKYSCGEMCTT-EQ 761
IKE+ EK + +DDVLL+I+AG R+ I P+LE+EY + IHED+++++++SC E+C+T EQ
Sbjct: 666 IKELKEKSQNDDDVLLSISAGYRQPINPNLEYEYLNRAIHEDMFKVVQFSCEELCSTKEQ 725
Query: 762 LDKVMKIWTTFLEPMLGVPSRPQGAEDTEDVV-KAKSHTVKSRAASVGDSDGSPDGDAAA 820
L KV+++W FLE +LGVP R +G + EDVV K+ V + G++ S GD A
Sbjct: 726 LSKVLRLWENFLEAVLGVPPRAKGTDLVEDVVINPKTLDVNHSTSPNGEAAVSSGGDTAR 785
Query: 821 MTSKHSNPSRNGDESIPPEQSSSSRAW-----LPNGDHGIKEDVSVEADHNARKSDNFCD 875
+ S+ + NGDE +SSS + L N D KE+ +E A + C
Sbjct: 786 LASRKLKSAANGDE------NSSSGTFKHGIGLLNKDSTGKEN--LEDVEIANRDGVACS 837
Query: 876 SSEQDKVQNNAAMADETSGISKQASTNERLIGTNAAIAAAADQSNGRSNIENTSGLSVAH 935
+ + K Q A++ G +ER ++ +I + A+ ++ E G
Sbjct: 838 AVKPQKEQETGNEAEKRFGKPIPMDISERAAISSISIPSGAENNHCVVGKEVLPGAHEIQ 897
Query: 936 SRPGNHIVEGGLELRSSNEILPSSEGGECSRQNISTNGVMTEGAKILRYNAESVKQFKIE 995
++P + + + ++ S E + S++GG+ + NG+ ++ +K R + + + E
Sbjct: 898 AKPSDTLTDIHHDV-DSIETVHSTQGGDVGNSIVLANGLRSDSSKGTRNSDDPEGPSRNE 956
Query: 996 REEGELSPNGDFEEDNFAVYGESGLEAVHKAKD 1028
+EEGELSPNGDF EDNF VY + G+++ K ++
Sbjct: 957 KEEGELSPNGDF-EDNFGVYKDHGVKSTSKPEN 988
>sp|Q9XIE1|SNL5_ARATH Paired amphipathic helix protein Sin3-like 5 OS=Arabidopsis thaliana
GN=SNL5 PE=2 SV=3
Length = 1162
Score = 488 bits (1257), Expect = e-137, Method: Compositional matrix adjust.
Identities = 307/738 (41%), Positives = 395/738 (53%), Gaps = 175/738 (23%)
Query: 349 FSQELSFCEKVKDKLRDD---YQEFLRCLHLYTKEIITRSELQSLVG-------DLLGRY 398
F + F ++K + D Y++FL L++Y KE + +E+ V DLLG +
Sbjct: 127 FQVAIEFVNRIKARFGGDDRAYKKFLDILNMYRKETKSINEVYQEVTLLFQDHEDLLGEF 186
Query: 399 PDLMDGFNGFLA---------------------------------------------RCE 413
+ F G ++ R +
Sbjct: 187 VHFLPDFRGSVSVNDPLFQRNTIPRDRNSTFPGMHPKHFEKKIKRSRHDEYTELSDQRED 246
Query: 414 KSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRLDKSVA 473
E L+A S +SL N+G+ P KVED + + E + G E+D
Sbjct: 247 GDENLVA--YSAESLANQGQWPGYPKVEDTEGIQIYESNGG--------HERD------- 289
Query: 474 FVNKDVGPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAE 533
D+G + ++ S+ ++AK I ELDL++C +CTPSYR LP +Y I S R LG +
Sbjct: 290 ---PDIGSQKNLLSTN--HMAKAINELDLTDCAQCTPSYRRLPDDYPIQIPSYRNSLGEK 344
Query: 534 VLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEK 593
VLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESV+ KRVE LLEK
Sbjct: 345 VLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVSAAIKRVESLLEK 404
Query: 594 INNNTIKTDGPIRVEDHFTALNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQ 653
INNNTI + PI + +H + LNLRCIERLYGD+GLDVMD L+KN+ +ALPVILTRLKQKQ
Sbjct: 405 INNNTISIETPICIREHLSELNLRCIERLYGDYGLDVMDFLKKNSHIALPVILTRLKQKQ 464
Query: 654 EEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKE 713
EEWARCR+DF KVWAE+Y+KN+HKSLDHRSFYFKQQDSK+L K L AEIK+ISE+K KE
Sbjct: 465 EEWARCRADFRKVWAEVYAKNHHKSLDHRSFYFKQQDSKNLSTKGLVAEIKDISERKHKE 524
Query: 714 DDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLIKYSCGEMCTTEQLDKVMKIWTTFL 773
D +L AIA G + S P +EF Y+D +H DLY+LIKY C E+C TEQ DKVMK+W TFL
Sbjct: 525 D-LLRAIAVGTKPSFTPDVEFIYTDTKVHTDLYKLIKYYCEEICATEQSDKVMKLWVTFL 583
Query: 774 EPMLGVPSRPQGAEDTEDVVKA---KSHTVKSRAASVGDSDGSPDGDAAAMTSKHSNPSR 830
EPM GVPSR + E +DV K + H S A DGS + +T
Sbjct: 584 EPMFGVPSRSETIETMKDVAKIEDNQEHHDASEAVKENTCDGSMASNLKPLT-------- 635
Query: 831 NGDESIPPEQSSSSRAWLPNGDHGIKEDVSVEADHNARKSDNFCDSSEQDKVQNNAAMAD 890
PP+ +PN ++ + + S D N +S +QDK+ + AA
Sbjct: 636 ------PPK--------MPNKENPMIQGSSFAQDLPV----NTGESIQQDKLHDVAA--- 674
Query: 891 ETSGISKQASTNERLIGTNAAIAAAADQSNGRSNIENTSGLSVAHSRPGNHIVEGGLELR 950
I+ + S +L+ T N ++ G+E R
Sbjct: 675 ----ITNEDSQPSKLVSTR------------------------------NDLIMEGVENR 700
Query: 951 SSNEILPSSEGGECSRQNISTNGVMTEGAKILRYNAESVKQFKIEREEGELSPNGDFEED 1010
S R + S+ K+EREEGELSP E++
Sbjct: 701 S-------------------------------RVSDVSMGGHKVEREEGELSPTESCEQE 729
Query: 1011 NFAVYGESGLEAVHKAKD 1028
NF VY E+GLE V K D
Sbjct: 730 NFEVYKENGLEPVQKLPD 747
Score = 279 bits (714), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 152/256 (59%), Positives = 181/256 (70%), Gaps = 4/256 (1%)
Query: 1 MKRSRDEVYMNSQIKRPMISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQ 60
MKR R+EVY+ Q++ P +SSRGE +G+ + GGG G DAL YLKAVKD+FQ
Sbjct: 1 MKRVREEVYVEPQMRGPTVSSRGETNGRPSTISGGGTTGGLTTV--DALTYLKAVKDMFQ 58
Query: 61 DKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLED 120
D +EKY+ FL VMKDFKAQR+DT GVIARVK+LFKG+ DL+LGFNTFLPKGY+ITL ED
Sbjct: 59 DNKEKYETFLGVMKDFKAQRVDTNGVIARVKDLFKGYDDLLLGFNTFLPKGYKITLQPED 118
Query: 121 EQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALF 180
E+P KKPV+F+ AI FVN+IK RF GDD YK FLDILNMYRKE KSI EVYQEV LF
Sbjct: 119 EKP--KKPVDFQVAIEFVNRIKARFGGDDRAYKKFLDILNMYRKETKSINEVYQEVTLLF 176
Query: 181 QDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQVHVDKKERAMASHA 240
QDH DLL EF HFLPD G+ S++ RN+I RDR+S P H +KK +
Sbjct: 177 QDHEDLLGEFVHFLPDFRGSVSVNDPLFQRNTIPRDRNSTFPGMHPKHFEKKIKRSRHDE 236
Query: 241 DRDLSVDRPDPDHDRV 256
+LS R D D + V
Sbjct: 237 YTELSDQREDGDENLV 252
>sp|Q9XIK6|SNL6_ARATH Paired amphipathic helix protein Sin3-like 6 OS=Arabidopsis thaliana
GN=SNL6 PE=3 SV=2
Length = 1173
Score = 472 bits (1214), Expect = e-132, Method: Compositional matrix adjust.
Identities = 303/713 (42%), Positives = 386/713 (54%), Gaps = 136/713 (19%)
Query: 349 FSQELSFCEKVKDKLRDD---YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGF 405
F + F K+K + DD Y+ FL L+LY KE + SE+ V L + DL+ F
Sbjct: 166 FKDAIGFVTKIKTRFGDDEHAYKRFLDILNLYRKEKKSISEVYEEVTMLFKGHEDLLMEF 225
Query: 406 NGFLARCEKSEELLADVM------SKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKD-- 457
FL C +S + + + ++ ++ + + K+ED D +R+DG ++
Sbjct: 226 VNFLPNCPESAPSTKNAVPRHKGTATTAMHSDKKRKQRCKLEDYSGHSD-QREDGDENLV 284
Query: 458 ----------------RDREARE------KDRLDKSVAFVNKDVGPKMSMYSSKDKYLAK 495
RD E RE DR +KS A ++D+G + S KY+
Sbjct: 285 TCSADSPVGEGQPGYFRDYENREDTETDTADRTEKSAASGSQDIGN----HKSTTKYVGT 340
Query: 496 PIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMR 555
PI ELDLS C +CTPSYRLLPK+Y + S R LG + LNDH VSVTSGSEDYSF HMR
Sbjct: 341 PINELDLSECTQCTPSYRLLPKDYAVEIPSYRNTLGKKTLNDHLVSVTSGSEDYSFSHMR 400
Query: 556 KNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFTALN 615
KNQYEESLFRCEDDR+E+DMLL SV+ K+VE LLEK+NNNTI D I +E H +A+N
Sbjct: 401 KNQYEESLFRCEDDRYEMDMLLGSVSSAIKQVEILLEKMNNNTISVDSTICIEKHLSAMN 460
Query: 616 LRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNY 675
LRCIERLYGD+GLDVMD+L+KN ALPVILTRLKQKQEEWARC SDF KVWAE+Y+KN+
Sbjct: 461 LRCIERLYGDNGLDVMDLLKKNMHSALPVILTRLKQKQEEWARCHSDFQKVWAEVYAKNH 520
Query: 676 HKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEFE 735
HKSLDHRSFYFKQQDSK+L K L AE+K+ISEKK +ED +L AIA P LEF
Sbjct: 521 HKSLDHRSFYFKQQDSKNLSTKCLVAEVKDISEKKHQED-LLQAIAVRVMPLFTPDLEFN 579
Query: 736 YSDPDIHEDLYQLIKYSCGEMCTTEQLDKVMKIWTTFLEPMLGVPSRPQGAEDTEDVVKA 795
Y D IHEDLY LIKY C E+C TEQ DKVMK+W TFLEP+ G+ SR Q EDV K
Sbjct: 580 YCDTQIHEDLYLLIKYYCEEICATEQSDKVMKLWITFLEPIFGILSRSQDNLALEDVSKL 639
Query: 796 KSHTVKSRAASVGDSDGSPDGDAAAMTSKHSNPSRNGDESIPPEQSSSSRAWLPNGDHGI 855
K++ + D+ + A+ KH + + Q SSSR
Sbjct: 640 KNNR------ELQDACLAVKETASGSNRKHPISPKRLSKDNTKMQGSSSR---------- 683
Query: 856 KEDVSVEADHNARKSDNFCDSSEQDKVQNNAAMADETSGISKQASTNERLIGTNAAIAAA 915
EDVS +++ DK+Q++AAM TNE +I ++ ++
Sbjct: 684 -EDVSANIK---------VKTAQPDKLQDDAAM------------TNE-VIQSSKFVSPK 720
Query: 916 ADQSNGRSNIENTSGLSVAHSRPGNHIVEGGLELRSSNEILPSSEGGECSRQNISTNGVM 975
DQ GNH+V
Sbjct: 721 NDQ---------------IMEDEGNHMV-------------------------------- 733
Query: 976 TEGAKILRYNAESVKQFKIEREEGELSPNGDFEEDNFAVYGESGLEAVHKAKD 1028
NA SV+ K E EEGELSP E+ NF V G++ + + K D
Sbjct: 734 ---------NAASVE--KHELEEGELSPTASREQSNFEVNGQNAFKPLQKVTD 775
Score = 241 bits (615), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 132/262 (50%), Positives = 174/262 (66%), Gaps = 25/262 (9%)
Query: 1 MKRSRDEVYMNSQIKRPMISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQ 60
MKR+R++V+ ++Q ++P +SSRGE + + + DAL YLKAVKDIF
Sbjct: 52 MKRAREDVHTDTQKRKPEVSSRGETNKLPRTI--------------DALTYLKAVKDIFH 97
Query: 61 DKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLED 120
D +EKY+ FLE+MK+FKAQ IDT GVI R+K LFKG+RDL+LGFNTFLPKGY+ITL E+
Sbjct: 98 DNKEKYESFLELMKEFKAQTIDTNGVIERIKVLFKGYRDLLLGFNTFLPKGYKITLLPEE 157
Query: 121 EQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALF 180
E+ PK V+F++AI FV KIKTRF D+H YK FLDILN+YRKE KSI+EVY+EV LF
Sbjct: 158 EK--PKIRVDFKDAIGFVTKIKTRFGDDEHAYKRFLDILNLYRKEKKSISEVYEEVTMLF 215
Query: 181 QDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQVHVDKKERAMASHA 240
+ H DLL EF +FLP+ +A PS +N++ R + +A +H DKK +
Sbjct: 216 KGHEDLLMEFVNFLPNCPESA-----PSTKNAVPRHKGTATTA---MHSDKKRKQRCKLE 267
Query: 241 DRDLSVD-RPDPDHDRVLLKSD 261
D D R D D + V +D
Sbjct: 268 DYSGHSDQREDGDENLVTCSAD 289
>sp|Q60520|SIN3A_MOUSE Paired amphipathic helix protein Sin3a OS=Mus musculus GN=Sin3a
PE=1 SV=3
Length = 1274
Score = 195 bits (496), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 108/285 (37%), Positives = 166/285 (58%), Gaps = 11/285 (3%)
Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQ 558
E+D ++C+R SYR LPK+Y P + RT L EVLND WVS S SED +F +K Q
Sbjct: 546 EIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVSSKKTQ 605
Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TAL 614
YEE ++RCED+RFELD++LE+ T + +E + +K++ + + R+++ +
Sbjct: 606 YEEHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSAEEQAKFRLDNTLGGTSEVI 665
Query: 615 NLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKN 674
+ + ++R+Y D D++D LRKN S+A+P++L RLK K+EEW + FNKVW E K
Sbjct: 666 HRKALQRIYADKAADIIDGLRKNPSIAVPIVLKRLKMKEEEWREAQRGFNKVWREQNEKY 725
Query: 675 YHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEF 734
Y KSLDH+ FKQ D+K L +K+L EI+ I ++++++ A + PHL
Sbjct: 726 YLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQ-----ATEENAGVPVGPHLSL 780
Query: 735 EYSDPDIHEDLYQLIKYSCGEMCTTEQLD--KVMKIWTTFLEPML 777
Y D I ED LI + ++ D K+ +I F+ +L
Sbjct: 781 AYEDKQILEDAAALIIHHVKRQTGIQKEDKYKIKQIMHHFIPDLL 825
Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/103 (48%), Positives = 67/103 (65%), Gaps = 2/103 (1%)
Query: 18 MISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFK 77
++ S P+ V G Q+L DAL+YL VK F + + Y+DFL++MK+FK
Sbjct: 98 VVQSHAHPAPPVAPVQGQQQ--FQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFK 155
Query: 78 AQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLED 120
+Q IDT GVI+RV +LFKGH DLI+GFNTFLP GY+I + D
Sbjct: 156 SQSIDTPGVISRVSQLFKGHPDLIMGFNTFLPPGYKIEVQTND 198
Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 56/90 (62%), Gaps = 13/90 (14%)
Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI-------------TEVY 173
+PVEF AIN+VNKIK RFQG +YK+FL+IL+ Y+KE ++ EVY
Sbjct: 300 QPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVY 359
Query: 174 QEVEALFQDHPDLLEEFTHFLPDSSGAASI 203
+V LF++ DLL EF FLPD++ + +
Sbjct: 360 AQVARLFKNQEDLLSEFGQFLPDANSSVLL 389
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Query: 343 NAMKSMFSQELSFCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPD 400
+A K E F +KV+ LR + Y+ FLRCL ++ +E+I+R+EL LV LG++P+
Sbjct: 455 DASKHGVGTESLFFDKVRKALRSAEAYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPE 514
Query: 401 LMDGFNGFLA 410
L + F FL
Sbjct: 515 LFNWFKNFLG 524
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 9/81 (11%)
Query: 124 PPKKPVE---------FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQ 174
PP PV+ E+A+++++++K +F VY FLDI+ ++ ++ V
Sbjct: 107 PPVAPVQGQQQFQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVIS 166
Query: 175 EVEALFQDHPDLLEEFTHFLP 195
V LF+ HPDL+ F FLP
Sbjct: 167 RVSQLFKGHPDLIMGFNTFLP 187
Score = 41.6 bits (96), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 13/82 (15%)
Query: 41 QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDT--AG-----------VI 87
Q + N A+ Y+ +K+ FQ + + Y FLE++ ++ ++ + AG V
Sbjct: 300 QPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVY 359
Query: 88 ARVKELFKGHRDLILGFNTFLP 109
A+V LFK DL+ F FLP
Sbjct: 360 AQVARLFKNQEDLLSEFGQFLP 381
>sp|Q96ST3|SIN3A_HUMAN Paired amphipathic helix protein Sin3a OS=Homo sapiens GN=SIN3A
PE=1 SV=2
Length = 1273
Score = 195 bits (495), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 108/285 (37%), Positives = 166/285 (58%), Gaps = 11/285 (3%)
Query: 499 ELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQ 558
E+D ++C+R SYR LPK+Y P + RT L EVLND WVS S SED +F +K Q
Sbjct: 545 EIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVSSKKTQ 604
Query: 559 YEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TAL 614
YEE ++RCED+RFELD++LE+ T + +E + +K++ + + R+++ +
Sbjct: 605 YEEHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSAEEQAKFRLDNTLGGTSEVI 664
Query: 615 NLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKN 674
+ + ++R+Y D D++D LRKN S+A+P++L RLK K+EEW + FNKVW E K
Sbjct: 665 HRKALQRIYADKAADIIDGLRKNPSIAVPIVLKRLKMKEEEWREAQRGFNKVWREQNEKY 724
Query: 675 YHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEF 734
Y KSLDH+ FKQ D+K L +K+L EI+ I ++++++ A + PHL
Sbjct: 725 YLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQ-----ATEENAGVPVGPHLSL 779
Query: 735 EYSDPDIHEDLYQLIKYSCGEMCTTEQLD--KVMKIWTTFLEPML 777
Y D I ED LI + ++ D K+ +I F+ +L
Sbjct: 780 AYEDKQILEDAAALIIHHVKRQTGIQKEDKYKIKQIMHHFIPDLL 824
Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/103 (48%), Positives = 67/103 (65%), Gaps = 2/103 (1%)
Query: 18 MISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFK 77
++ S P+ V G Q+L DAL+YL VK F + + Y+DFL++MK+FK
Sbjct: 98 VVQSHAHPAPPVAPVQGQQQ--FQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFK 155
Query: 78 AQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLED 120
+Q IDT GVI+RV +LFKGH DLI+GFNTFLP GY+I + D
Sbjct: 156 SQSIDTPGVISRVSQLFKGHPDLIMGFNTFLPPGYKIEVQTND 198
Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 55/88 (62%), Gaps = 13/88 (14%)
Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI-------------TEVY 173
+PVEF AIN+VNKIK RFQG +YK+FL+IL+ Y+KE ++ EVY
Sbjct: 300 QPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVY 359
Query: 174 QEVEALFQDHPDLLEEFTHFLPDSSGAA 201
+V LF++ DLL EF FLPD++ +
Sbjct: 360 AQVARLFKNQEDLLSEFGQFLPDANSSV 387
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 355 FCEKVKDKLR--DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLA 410
F +KV+ LR + Y+ FLRCL ++ +E+I+R+EL LV LG++P+L + F FL
Sbjct: 466 FFDKVRKALRSAEAYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPELFNWFKNFLG 523
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 9/81 (11%)
Query: 124 PPKKPVE---------FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQ 174
PP PV+ E+A+++++++K +F VY FLDI+ ++ ++ V
Sbjct: 107 PPVAPVQGQQQFQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVIS 166
Query: 175 EVEALFQDHPDLLEEFTHFLP 195
V LF+ HPDL+ F FLP
Sbjct: 167 RVSQLFKGHPDLIMGFNTFLP 187
Score = 41.6 bits (96), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 13/82 (15%)
Query: 41 QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDT--AG-----------VI 87
Q + N A+ Y+ +K+ FQ + + Y FLE++ ++ ++ + AG V
Sbjct: 300 QPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVY 359
Query: 88 ARVKELFKGHRDLILGFNTFLP 109
A+V LFK DL+ F FLP
Sbjct: 360 AQVARLFKNQEDLLSEFGQFLP 381
>sp|Q62141|SIN3B_MOUSE Paired amphipathic helix protein Sin3b OS=Mus musculus GN=Sin3b
PE=1 SV=2
Length = 1098
Score = 192 bits (487), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 111/300 (37%), Positives = 170/300 (56%), Gaps = 11/300 (3%)
Query: 498 QELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKN 557
+E+D ++C+R SYR LPK Y P S RT + EVLND WVS S SED +F +K
Sbjct: 378 REIDYASCKRIGSSYRALPKTYQQPKCSGRTAICKEVLNDTWVSFPSWSEDSTFVSSKKT 437
Query: 558 QYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHF----TA 613
YEE L RCED+RFELD++LE+ T + +E + +K++ + +R++D
Sbjct: 438 PYEEQLHRCEDERFELDVVLETNLATIRVLESVQKKLSRMAPEDQEKLRLDDCLGGTSEV 497
Query: 614 LNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSK 673
+ R I R+YGD +V++ L++N + A+PV+L RLK K+EEW + FNK+W E Y K
Sbjct: 498 IQRRAIHRIYGDKAPEVIESLKRNPATAVPVVLKRLKAKEEEWREAQQGFNKIWREQYEK 557
Query: 674 NYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLE 733
Y KSLDH++ FKQ D+K+L +K+L EI+ + ++ +++ + S PHL
Sbjct: 558 AYLKSLDHQAVNFKQNDTKALRSKSLLNEIESVYDEHQEQHS-----EGRSAPSSEPHLI 612
Query: 734 FEYSDPDIHEDLYQLIKYSCGEMCTTEQLDK--VMKIWTTFLEPMLGVPSRPQGAEDTED 791
F Y D I ED LI Y ++ D+ + ++ FL + P ++D+ D
Sbjct: 613 FVYEDRQILEDAAALISYYVKRQPAIQKEDQGTIRQLLHRFLPSLFFSQQCPGTSDDSAD 672
Score = 138 bits (348), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/211 (41%), Positives = 108/211 (51%), Gaps = 46/211 (21%)
Query: 33 GGGGGGGAQKLTTN--DALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARV 90
G G GG +KL + DAL YL VK F Y+ FLE+MK+FK+Q IDT GVI RV
Sbjct: 20 GRSGSGGHEKLPVHVEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRV 79
Query: 91 KELFKGHRDLILGFNTFLPKGYEITLPL-------------------------------- 118
+LF H DLI+GFN FLP GY I +P
Sbjct: 80 SQLFHEHPDLIVGFNAFLPLGYRIDIPKNGKLNIQSPLSSQDNSHSHGDCGEDFKQMSYK 139
Query: 119 ED--EQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKEN---------- 166
ED + P VEF AI++VNKIKTRF +Y+SFL+IL+ Y+KE
Sbjct: 140 EDRGQVPLESDSVEFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLHTKGRPFRG 199
Query: 167 KSITEVYQEVEALFQDHPDLLEEFTHFLPDS 197
S EV+ EV LF+ DLL EF FLP++
Sbjct: 200 MSEEEVFTEVANLFRGQEDLLSEFGQFLPEA 230
Score = 57.4 bits (137), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Query: 351 QELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGF 408
QE SF +KV+ L+ Y+ FLRC+ L+ +E+++ SEL LV LG++P+L F F
Sbjct: 297 QEFSFFDKVRRVLKSQEVYENFLRCIALFNQELVSGSELLQLVSPFLGKFPELFAQFKSF 356
Query: 409 LARCEKSEELLADVMSKKS 427
L E S A MS +S
Sbjct: 357 LGVKELS---FAPPMSDRS 372
>sp|O75182|SIN3B_HUMAN Paired amphipathic helix protein Sin3b OS=Homo sapiens GN=SIN3B
PE=1 SV=2
Length = 1162
Score = 189 bits (479), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 137/408 (33%), Positives = 202/408 (49%), Gaps = 49/408 (12%)
Query: 351 QELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGF 408
QE SF +KV+ L+ Y+ FLRC+ L+ +E+++ SEL LV LG++P+L F F
Sbjct: 306 QEFSFFDKVRRVLKSQEVYENFLRCIALFNQELVSGSELLQLVSPFLGKFPELFAQFKSF 365
Query: 409 LARCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRL 468
L E S A MS +S DG+ R+ + R+
Sbjct: 366 LGVKELS---FAPPMSDRS------------------------GDGI-SREIDYASCKRI 397
Query: 469 DKSVAFVNKDV-GPKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQR 527
S + K PK S ++ K L + C ++ IP S
Sbjct: 398 GSSYRALPKTYQQPKCSGRTAICKELDHWTLLQGSWTDDYCMSKFK---NTCWIPGYS-- 452
Query: 528 TELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRV 587
A VLND WVS S SED +F +K YEE L RCED+RFELD++LE+ T + +
Sbjct: 453 ----AGVLNDTWVSFPSWSEDSTFVSSKKTPYEEQLHRCEDERFELDVVLETNLATIRVL 508
Query: 588 EELLEKINNNTIKTDGPIRVEDHF----TALNLRCIERLYGDHGLDVMDVLRKNASLALP 643
E + +K++ + R++D + R I R+YGD ++++ L+KN A+P
Sbjct: 509 ESVQKKLSRMAPEDQEKFRLDDSLGGTSEVIQRRAIYRIYGDKAPEIIESLKKNPVTAVP 568
Query: 644 VILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEI 703
V+L RLK K+EEW + FNK+W E Y K Y KSLDH++ FKQ D+K+L +K+L EI
Sbjct: 569 VVLKRLKAKEEEWREAQQGFNKIWREQYEKAYLKSLDHQAVNFKQNDTKALRSKSLLNEI 628
Query: 704 KEISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQLIKY 751
+ + ++ +++ + S PHL F Y D I ED LI Y
Sbjct: 629 ESVYDEHQEQHS-----EGRSAPSSEPHLIFVYEDRQILEDAAALISY 671
Score = 139 bits (350), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/237 (38%), Positives = 119/237 (50%), Gaps = 47/237 (19%)
Query: 33 GGGGGGGAQKLTTN--DALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARV 90
G G G +KL + DAL YL VK F Y+ FLE+MK+FK+Q IDT GVI RV
Sbjct: 27 GRSGSAGHEKLPVHVEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRV 86
Query: 91 KELFKGHRDLILGFNTFLPKGYEITLP-----------------------LED--EQPP- 124
+LF H DLI+GFN FLP GY I +P ED +Q P
Sbjct: 87 SQLFHEHPDLIVGFNAFLPLGYRIDIPKNGKLNIQSPLTSQENSHNHGDGAEDFKQQVPY 146
Query: 125 ----PKKP-----VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKEN--------- 166
P+ P VEF AI++VNKIKTRF +Y+SFL+IL+ Y+KE
Sbjct: 147 KEDKPQVPLESDSVEFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLNTRGRPFR 206
Query: 167 -KSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMP 222
S EV+ EV LF+ DLL EF FLP++ + P +S+ ++ P
Sbjct: 207 GMSEEEVFTEVANLFRGQEDLLSEFGQFLPEAKRSLFTGNGPCEMHSVQKNEHDKTP 263
>sp|O74755|PST3_SCHPO Paired amphipathic helix protein pst3 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=pst3 PE=3 SV=1
Length = 1154
Score = 148 bits (374), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/277 (35%), Positives = 131/277 (47%), Gaps = 57/277 (20%)
Query: 26 SGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAG 85
S +Q G + L NDAL+YL+ VK F ++RE Y+ FLE+M+DFK+Q +DT G
Sbjct: 96 SISSQNAEGLSSSSNRPLDVNDALSYLELVKYYFSERREIYNRFLEIMRDFKSQALDTLG 155
Query: 86 VIARVKELFKGHRDLILGFNTFLPKGYEI----------------------------TLP 117
VI RV ELF G+ LI GFNTFLP GY+I TLP
Sbjct: 156 VINRVSELFNGYPQLIEGFNTFLPSGYKIEVQLDSSNTSVVRVGTPMHPLPQQGVQSTLP 215
Query: 118 L---------------EDEQPPPKKP------------VEFEEAINFVNKIKTRFQGDDH 150
+ D QP P P V+F AI ++NK+K R+ +
Sbjct: 216 VAPSNEDQRTMESTSPTDSQPQPSAPNLVSSTENEKPRVDFNYAIAYMNKVKARYPPNSD 275
Query: 151 VYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLPDS--SGAASIHYVPS 208
Y FL +L Y+K KSI EV V +F+D PDLLEEF FLPD+ S S V
Sbjct: 276 TYMEFLGVLRTYQKAQKSIFEVRARVAEIFKDSPDLLEEFKLFLPDNVDSTEPSTPNVQK 335
Query: 209 GRNSILRDRSSAMPTARQVHVDKKERAMASHADRDLS 245
N + + ++P + V + A ++ R +S
Sbjct: 336 SPNRLPPVGNFSLPPSAPVREKRNRPAHSAQISRSIS 372
Score = 73.6 bits (179), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 99/206 (48%), Gaps = 3/206 (1%)
Query: 511 SYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDR 570
+YR LP ++ S R +L VLND ++SV +NQY ++L ED+R
Sbjct: 499 TYRKLPDSWKQDKCSGRDDLDNSVLNDDYISVAPKPSHVKNIMHHENQYLQALQLVEDER 558
Query: 571 FELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFTALNLRCIERLYG-DHGLD 629
++ D +L + K + E + ++T ++ + + + +YG +H
Sbjct: 559 YDYDRVLNTTESAIKILANFCEPTIHEHLET--ALQELERSKRIIKNALIIVYGKEHANL 616
Query: 630 VMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQ 689
+D L K A PV+L R+K K +EW R + +++K+W +I KN + D R + +
Sbjct: 617 ALDTLFKKLPTAAPVLLKRIKTKDQEWRRSKREWSKIWRQIEKKNAQAAFDDRYCRIEGR 676
Query: 690 DSKSLGAKALSAEIKEISEKKRKEDD 715
D + L + +I +I ++++ D
Sbjct: 677 DRRGLSYSRILRDIDDIYQRQKHRID 702
Score = 34.3 bits (77), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Query: 353 LSFCEKVKDKL---RDDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFL 409
LS+ E VK R+ Y FL + + + + + + V +L YP L++GFN FL
Sbjct: 119 LSYLELVKYYFSERREIYNRFLEIMRDFKSQALDTLGVINRVSELFNGYPQLIEGFNTFL 178
Query: 410 ARCEKSE 416
K E
Sbjct: 179 PSGYKIE 185
Score = 34.3 bits (77), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 349 FSQELSFCEKVKDKL---RDDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGF 405
F+ +++ KVK + D Y EFL L Y K + E+++ V ++ PDL++ F
Sbjct: 256 FNYAIAYMNKVKARYPPNSDTYMEFLGVLRTYQKAQKSIFEVRARVAEIFKDSPDLLEEF 315
Query: 406 NGFL 409
FL
Sbjct: 316 KLFL 319
>sp|Q09750|PST1_SCHPO Paired amphipathic helix protein pst1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=pst1 PE=1 SV=1
Length = 1522
Score = 147 bits (372), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 95/299 (31%), Positives = 158/299 (52%), Gaps = 27/299 (9%)
Query: 496 PIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSV-TSGSEDYSFKHM 554
P +DL+ C+ C PSYRLLPK L+ S R +L +LND WVS T SED F
Sbjct: 584 PRPRVDLTQCKSCGPSYRLLPKIELLLPCSGRDDLCWTILNDAWVSFPTLASEDSGFIAH 643
Query: 555 RKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDG--------PIR 606
RKNQ+EE+L + E++R+E D + + R ELL+ + +K P
Sbjct: 644 RKNQFEENLHKLEEERYEYDRHIGA----NMRFIELLQIHADKMLKMSEVEKANWTLPSN 699
Query: 607 VEDHFTALNLRCIERLYG-DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNK 665
+ ++ + I+++YG +H +++ L+KN S+ +P++L RLK+K EW ++ +N+
Sbjct: 700 LGGKSVSIYHKVIKKVYGKEHAQQIIENLQKNPSVTIPIVLERLKKKDREWRSLQNHWNE 759
Query: 666 VWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNR 725
+W +I KN+++SLDH+ FK D KS K L +E++ ++++++ E ++ G
Sbjct: 760 LWHDIEEKNFYRSLDHQGVSFKSVDKKSTTPKFLISELRNLAQQQKVE------LSEGK- 812
Query: 726 RSIVP--HLEFEYSDPDIHEDLYQLIKYSC--GEMCTTEQLDKVMKIWTTFLEPMLGVP 780
+ P F Y DP+I D+ +L G + E +K+ +FL VP
Sbjct: 813 --VTPSHQFLFSYKDPNIITDIARLFGVFLIHGSTHSAEDNEKMSNFLRSFLSLFFDVP 869
Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 54/76 (71%)
Query: 41 QKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDL 100
++L DAL+YL VK F + E Y++FL++MK+FK+Q I+T VI RV +LF G+ +L
Sbjct: 178 RQLNVTDALSYLDLVKLQFHQEPEIYNEFLDIMKEFKSQAIETPEVITRVSKLFAGYPNL 237
Query: 101 ILGFNTFLPKGYEITL 116
I GFNTFLP GY I +
Sbjct: 238 IQGFNTFLPPGYSIEI 253
Score = 83.6 bits (205), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 116/287 (40%), Gaps = 72/287 (25%)
Query: 126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPD 185
K+ + ++AINFVN +K RF Y SFLDIL Y+ + + I VY +V LF + PD
Sbjct: 344 KQAADLDQAINFVNNVKNRFSHKPEAYNSFLDILKSYQHDQRPIQLVYFQVSQLFAEAPD 403
Query: 186 LLEEFTHFLPDSSGAASIH------YVPSGRNSILRDRS-SAMPTARQVHVDKKERAMAS 238
LLEEF FLPD S A VP + RS SA PT+ + K +
Sbjct: 404 LLEEFKRFLPDVSVNAPAETQDKSTVVPQESATATPKRSPSATPTSALPPIGKFAPPTTA 463
Query: 239 HADRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERRDDHRRERERDDRDFENDVNRDFS 298
A +P P ++RRGE + R+ +R
Sbjct: 464 KA-------QPAP------------EKRRGEPAVQTRNHSKR------------------ 486
Query: 299 MQRFPHKRKSARKIEDSTAEPLHQGGEGDENFGMHPVSSSYDDKNAMKSMFSQELSFCEK 358
R + +E++T + P++ +KN EL F E
Sbjct: 487 ------TRTATSSVEETTPRAFNV-----------PIA---QNKNP------SELEFLEH 520
Query: 359 VKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMD 403
+ L ++ Y EF++ L LY++E+ ++ L G LM+
Sbjct: 521 ARQYLANESKYNEFIKLLELYSQEVFDKNALVERCYVFFGSNEHLMN 567
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 37/63 (58%)
Query: 133 EAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTH 192
+A+++++ +K +F + +Y FLDI+ ++ + EV V LF +P+L++ F
Sbjct: 184 DALSYLDLVKLQFHQEPEIYNEFLDIMKEFKSQAIETPEVITRVSKLFAGYPNLIQGFNT 243
Query: 193 FLP 195
FLP
Sbjct: 244 FLP 246
Score = 40.8 bits (94), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%)
Query: 48 ALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTF 107
A+ ++ VK+ F K E Y+ FL+++K ++ + V +V +LF DL+ F F
Sbjct: 352 AINFVNNVKNRFSHKPEAYNSFLDILKSYQHDQRPIQLVYFQVSQLFAEAPDLLEEFKRF 411
Query: 108 LP 109
LP
Sbjct: 412 LP 413
Score = 38.9 bits (89), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 353 LSFCEKVKDKLRDD---YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFL 409
LS+ + VK + + Y EFL + + + I E+ + V L YP+L+ GFN FL
Sbjct: 186 LSYLDLVKLQFHQEPEIYNEFLDIMKEFKSQAIETPEVITRVSKLFAGYPNLIQGFNTFL 245
>sp|P22579|SIN3_YEAST Transcriptional regulatory protein SIN3 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SIN3 PE=1 SV=2
Length = 1536
Score = 146 bits (369), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 98/272 (36%), Positives = 144/272 (52%), Gaps = 15/272 (5%)
Query: 486 YSSKDKYLAKPIQE---LDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVS- 541
Y K K + + E LDL CE PSY+ LPK+ S R ++ EVLND WV
Sbjct: 726 YQEKTKCIENIVHEKHRLDLDLCEAFGPSYKRLPKSDTFMPCSGRDDMCWEVLNDEWVGH 785
Query: 542 VTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKT 601
SED F RKNQYEE+LF+ E++R E D +ES T + +E ++ KI N T
Sbjct: 786 PVWASEDSGFIAHRKNQYEETLFKIEEERHEYDFYIESNLRTIQCLETIVNKIENMTENE 845
Query: 602 DGPIRVEDHF--TALNL--RCIERLY-GDHGLDVMDVLRKNASLALPVILTRLKQKQEEW 656
++ T++ + + I ++Y + G +++D L ++ ++ PV+L RLKQK EEW
Sbjct: 846 KANFKLPPGLGHTSMTIYKKVIRKVYDKERGFEIIDALHEHPAVTAPVVLKRLKQKDEEW 905
Query: 657 ARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDV 716
R + ++NKVW E+ K + KSLDH FKQ D K L K L I EIS K + +
Sbjct: 906 RRAQREWNKVWRELEQKVFFKSLDHLGLTFKQADKKLLTTKQL---ISEISSIKVDQTNK 962
Query: 717 LLAIAAGNRRSIVPHLEFEYSDPDIHEDLYQL 748
+ +S L+F++ D +I D+ L
Sbjct: 963 KIHWLTPKPKS---QLDFDFPDKNIFYDILCL 991
Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/74 (58%), Positives = 55/74 (74%)
Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
VEF +AI++VNKIKTRF +YK FL+IL Y++E K I EVY +V LFQ+ PDLLE
Sbjct: 406 VEFSQAISYVNKIKTRFADQPDIYKHFLEILQTYQREQKPINEVYAQVTHLFQNAPDLLE 465
Query: 189 EFTHFLPDSSGAAS 202
+F FLPDSS +A+
Sbjct: 466 DFKKFLPDSSASAN 479
Score = 88.6 bits (218), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 52/72 (72%)
Query: 43 LTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLIL 102
L DAL+YL+ VK F + + Y+ FL++MKDFK+Q IDT GVI RV LF+G+ LI
Sbjct: 219 LNVKDALSYLEQVKFQFSSRPDIYNLFLDIMKDFKSQAIDTPGVIERVSTLFRGYPILIQ 278
Query: 103 GFNTFLPKGYEI 114
GFNTFLP+GY I
Sbjct: 279 GFNTFLPQGYRI 290
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 40/69 (57%)
Query: 127 KPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDL 186
+P+ ++A++++ ++K +F +Y FLDI+ ++ + V + V LF+ +P L
Sbjct: 217 RPLNVKDALSYLEQVKFQFSSRPDIYNLFLDIMKDFKSQAIDTPGVIERVSTLFRGYPIL 276
Query: 187 LEEFTHFLP 195
++ F FLP
Sbjct: 277 IQGFNTFLP 285
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%)
Query: 48 ALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTF 107
A++Y+ +K F D+ + Y FLE+++ ++ ++ V A+V LF+ DL+ F F
Sbjct: 411 AISYVNKIKTRFADQPDIYKHFLEILQTYQREQKPINEVYAQVTHLFQNAPDLLEDFKKF 470
Query: 108 LP 109
LP
Sbjct: 471 LP 472
Score = 42.4 bits (98), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Query: 340 DDKNAMKSMFSQELSFCEKVKDKLRDD---YQEFLRCLHLYTKEIITRSELQSLVGDLLG 396
D K + FSQ +S+ K+K + D Y+ FL L Y +E +E+ + V L
Sbjct: 399 DAKKNVDVEFSQAISYVNKIKTRFADQPDIYKHFLEILQTYQREQKPINEVYAQVTHLFQ 458
Query: 397 RYPDLMDGFNGFL 409
PDL++ F FL
Sbjct: 459 NAPDLLEDFKKFL 471
Score = 41.2 bits (95), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Query: 123 PPPKKPVE----FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEA 178
P P +P+E E + F K K R+ G+ H+Y FL ILN+Y ++ + ++ ++V+
Sbjct: 650 PEPTEPIENNISLNEEVTFFEKAK-RYIGNKHLYTEFLKILNLYSQDILDLDDLVEKVDF 708
Query: 179 LFQDHPDLLEEFTHFL 194
+ +L F +F+
Sbjct: 709 YLGSNKELFTWFKNFV 724
Score = 38.9 bits (89), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 349 FSQELSFCEKVKDKLRDD--YQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFN 406
++E++F EK K + + Y EFL+ L+LY+++I+ +L V LG +L F
Sbjct: 662 LNEEVTFFEKAKRYIGNKHLYTEFLKILNLYSQDILDLDDLVEKVDFYLGSNKELFTWFK 721
Query: 407 GFLARCEKSE 416
F+ EK++
Sbjct: 722 NFVGYQEKTK 731
>sp|Q9SZ67|WRK19_ARATH Probable WRKY transcription factor 19 OS=Arabidopsis thaliana
GN=WRKY19 PE=2 SV=1
Length = 1895
Score = 112 bits (281), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/111 (53%), Positives = 78/111 (70%), Gaps = 12/111 (10%)
Query: 36 GGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFK 95
GGG +TT DAL YLKAVKD F+D EKYD FLEV+ D K Q +DT+GVIAR+K+LFK
Sbjct: 297 GGGNMGGVTTGDALNYLKAVKDKFEDS-EKYDTFLEVLNDCKHQGVDTSGVIARLKDLFK 355
Query: 96 GHRDLILGFNTFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQ 146
GH DL+LGFNT+L K Y+IT+ ED+ P I+F++K++ ++
Sbjct: 356 GHDDLLLGFNTYLSKEYQITILPEDDFP-----------IDFLDKVEGPYE 395
Score = 39.3 bits (90), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 129 VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLE 188
V +A+N++ +K +F+ D Y +FL++LN + + + V ++ LF+ H DLL
Sbjct: 304 VTTGDALNYLKAVKDKFE-DSEKYDTFLEVLNDCKHQGVDTSGVIARLKDLFKGHDDLLL 362
Query: 189 EFTHFL 194
F +L
Sbjct: 363 GFNTYL 368
>sp|O13919|PST2_SCHPO Paired amphipathic helix protein pst2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=pst2 PE=1 SV=1
Length = 1075
Score = 110 bits (274), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 107/410 (26%), Positives = 185/410 (45%), Gaps = 58/410 (14%)
Query: 343 NAMKSMFSQELSFCEKVKDKLRDDYQEFLRC---LHLYTKEIITRSELQSLVGDLLGRYP 399
N + + + + F +V+ L + ++F + L + + SELQ++V LL +P
Sbjct: 136 NDLPCTYHRAIGFVSRVRRALLSNPEQFFKLQDSLRKFKNSECSLSELQTIVTSLLAEHP 195
Query: 400 DLMDGFNGFLA----------------RCEKSEEL----LADVMSKK---------SLWN 430
L F+ FL R +S + ++D++S+ L N
Sbjct: 196 SLAHEFHNFLPSSIFFGSKPPLGSFPLRGIQSSQFTLSNISDLLSQSRPDNLSPFSHLSN 255
Query: 431 EGR-IPKSVKVEDRDRDRDRE-------RDDGVKDRDREAREKDRLDKSVAFVNKDVGPK 482
E K+VK D + E G+ DR+ + + F+ + G
Sbjct: 256 ESSDFFKNVKNVLTDVETYHEFLKLLNLYVQGIIDRN------ILVSRGFGFLKSNSGLW 309
Query: 483 MSMYS----SKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDH 538
S S S +++L+ + S+ C PSYRLLP S S R + +LND
Sbjct: 310 RSFLSLTSLSPEEFLS--VYNSACSDFPECGPSYRLLPVEERNISCSGRDDFAWGILNDD 367
Query: 539 WVS-VTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNN 597
WVS T SE+ F RK YEE++ + E++R+E D +E+ + T K ++++ +IN
Sbjct: 368 WVSHPTWASEESGFIVQRKTPYEEAMTKLEEERYEFDRHIEATSWTIKSLKKIQNRINEL 427
Query: 598 TIKTDGPIRVEDHF----TALNLRCIERLY-GDHGLDVMDVLRKNASLALPVILTRLKQK 652
+ +E+ ++ + I+ +Y +H ++ L + L LP++++RL++K
Sbjct: 428 PEEERETYTLEEGLGLPSKSIYKKTIKLVYTSEHAEEMFKALERMPCLTLPLVISRLEEK 487
Query: 653 QEEWARCRSDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAE 702
EEW + W I KNY KSLD + YFK +D K++ +K L AE
Sbjct: 488 NEEWKSVKRSLQPGWRSIEFKNYDKSLDSQCVYFKARDKKNVSSKFLLAE 537
Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 77/190 (40%), Gaps = 21/190 (11%)
Query: 28 QTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVI 87
Q Q+V G L D A+++ + + Y F++V+K + +D G I
Sbjct: 20 QNQLVHDFSPNGT-ALPELDIKAFVQKLGQRLCHRPYVYSAFMDVVKALHNEIVDFPGFI 78
Query: 88 ARVKELFKGHRDLILGFNTFLPKGYE---------ITLPLEDEQPPPKKP---------- 128
R+ + + + DL+ N FLP Y+ TL P P
Sbjct: 79 ERISVILRDYPDLLEYLNIFLPSSYKYLLSNSGANFTLQFTTPSGPVSTPSTYVATYNDL 138
Query: 129 -VEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLL 187
+ AI FV++++ + + D L ++ S++E+ V +L +HP L
Sbjct: 139 PCTYHRAIGFVSRVRRALLSNPEQFFKLQDSLRKFKNSECSLSELQTIVTSLLAEHPSLA 198
Query: 188 EEFTHFLPDS 197
EF +FLP S
Sbjct: 199 HEFHNFLPSS 208
>sp|Q3T8J9|GON4L_HUMAN GON-4-like protein OS=Homo sapiens GN=GON4L PE=1 SV=1
Length = 2241
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 73/158 (46%), Gaps = 9/158 (5%)
Query: 48 ALAYLKAVKDIFQDKREKYDDFLEVMKDFKA--QRIDTAGVIARVKELFKGHRDLILGFN 105
A AYL V++ Q KY+DFL+V+ +F++ QR + ++ L + L+ F
Sbjct: 1631 AQAYLTRVREALQHIPGKYEDFLQVIYEFESSTQRRTAVDLYKSLQILLQDWPQLLKDFA 1690
Query: 106 TFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRK- 164
FL + L +EQ FE++ F+ +++ F + ++ + +L
Sbjct: 1691 AFLLPEQALACGLFEEQ------QAFEKSRKFLRQLEICFAENPSHHQKIIKVLQGCADC 1744
Query: 165 ENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAAS 202
+ ITE+ ++ L + H L +EF+ F AAS
Sbjct: 1745 LPQEITELKTQMWQLLKGHDHLQDEFSIFFDHLRPAAS 1782
>sp|Q535K8|GON4L_RAT GON-4-like protein OS=Rattus norvegicus GN=Gon4l PE=2 SV=1
Length = 2256
Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 69/150 (46%), Gaps = 9/150 (6%)
Query: 48 ALAYLKAVKDIFQDKREKYDDFLEVMKDFK--AQRIDTAGVIARVKELFKGHRDLILGFN 105
A AYL V++ Q KY+DFL+++ +F+ AQ + ++ L L+ F
Sbjct: 1651 AQAYLTRVREALQHIPGKYEDFLQIIYEFESNAQMHSAVDLFKSLQTLLHDWPQLLKDFA 1710
Query: 106 TFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRK- 164
FL ++ L +EQ FE++ F+ +++ F + ++ + +L
Sbjct: 1711 AFLLPEQALSCGLFEEQ------QAFEKSRKFLRQLEICFAENPSHHQKIIKVLQGCADC 1764
Query: 165 ENKSITEVYQEVEALFQDHPDLLEEFTHFL 194
+ ITE+ ++ L + H L +EF+ F
Sbjct: 1765 LPQDITELKTQMWQLLRGHDHLQDEFSIFF 1794
>sp|Q9DB00|GON4L_MOUSE GON-4-like protein OS=Mus musculus GN=Gon4l PE=1 SV=3
Length = 2260
Score = 42.7 bits (99), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 72/158 (45%), Gaps = 9/158 (5%)
Query: 48 ALAYLKAVKDIFQDKREKYDDFLEVMKDFKA--QRIDTAGVIARVKELFKGHRDLILGFN 105
A AYL V++ Q KY+DFL+++ +F++ Q + ++ L + L+ F
Sbjct: 1655 AQAYLTRVREALQHTPGKYEDFLQIIYEFESSTQMHSAVDLFKSLQTLLQDWPQLLKDFA 1714
Query: 106 TFLPKGYEITLPLEDEQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILN-MYRK 164
FL ++ L +EQ FE++ F+ +++ F + ++ + +L
Sbjct: 1715 AFLLPEQALSCGLFEEQ------QAFEKSRKFLRQLEICFAENPSHHQKIIKVLQGCADC 1768
Query: 165 ENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAAS 202
+ I E+ ++ L + H L +EF+ F AAS
Sbjct: 1769 LPQDIAELKTQMWQLLRGHDHLQDEFSIFFDHLRPAAS 1806
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.131 0.375
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 399,054,329
Number of Sequences: 539616
Number of extensions: 18129086
Number of successful extensions: 73619
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 97
Number of HSP's successfully gapped in prelim test: 428
Number of HSP's that attempted gapping in prelim test: 65046
Number of HSP's gapped (non-prelim): 5349
length of query: 1031
length of database: 191,569,459
effective HSP length: 128
effective length of query: 903
effective length of database: 122,498,611
effective search space: 110616245733
effective search space used: 110616245733
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 67 (30.4 bits)