Query         001681
Match_columns 1031
No_of_seqs    294 out of 671
Neff          4.9 
Searched_HMMs 29240
Date          Tue Mar 26 17:37:46 2013
Command       hhsearch -i /local_scratch/syshi/lefta3m/001681.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_976-980//hhsearch_pdb/001681hhsearch_pdb 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 2czy_A Paired amphipathic heli   1.0       1       1  193.3   9.9   76   42-117     1-76  (77)
  2 2cr7_A Paired amphipathic heli   1.0       1       1  188.1   8.9   76   38-113     3-78  (80)
  3 2f05_A Paired amphipathic heli   1.0       1       1  181.9   6.4   80   40-119     2-91  (105)
  4 1e91_A Paired amphipathic heli   1.0       1       1  176.5   7.7   74   40-113     2-85  (85)
  5 2ld7_B Paired amphipathic heli   1.0       1       1  172.7   7.8   71  344-414     3-75  (75)
  6 1g1e_B SIN3A; four-helix bundl   1.0       1       1  163.6   8.7   74   38-111     3-89  (89)
  7 1g1e_B SIN3A; four-helix bundl   1.0       1       1  154.0   7.6   73  125-197     4-89  (89)
  8 2f05_A Paired amphipathic heli   1.0       1       1  153.5   7.8   77  126-202     2-88  (105)
  9 1e91_A Paired amphipathic heli   1.0       1       1  153.0   9.5   74  126-199     2-85  (85)
 10 2cr7_A Paired amphipathic heli   1.0       1       1  146.6   7.7   74  126-199     5-78  (80)

No 1  
>2czy_A Paired amphipathic helix protein SIN3B; SIN3, PAH1, transcriptional repressor, gene regulation; NMR {Mus musculus}
Probab=1.00  E-value=1  Score=193.31  Aligned_cols=76  Identities=54%  Similarity=0.933  Sum_probs=74.7

Q ss_pred             CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCC
Q ss_conf             8874479999999999843384649999999999773289946799999999604936997865218998644589
Q 001681           42 KLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLP  117 (1031)
Q Consensus        42 ~l~v~dAlsYL~~VK~rF~d~P~vY~~FLeIMkdFksq~idt~gVi~RV~~LF~GhpdLI~GFNtFLP~gy~I~~~  117 (1031)
                      +++++||++||++||.+|+++|++|++||+||++|+++++++++||+||+.||+||||||.|||+|||+||+|+|+
T Consensus         1 ~l~~~dA~~yl~~VK~~F~~~p~~Y~~FL~im~~~k~~~~~~~~v~~rv~~Lf~~hpdLi~gFn~FLP~~~~i~~~   76 (77)
T 2czy_A            1 PVHVEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRVSQLFHEHPDLIVGFNAFLPLGYRIDIP   76 (77)
T ss_dssp             CCSHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHTTTCHHHHHHHHTTSCSSSCCCCC
T ss_pred             CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEECCC
T ss_conf             9878999999999999985685999999999999987699899999999999768879999999888997640598


No 2  
>2cr7_A Paired amphipathic helix protein SIN3B; paired amphipathic helix repeat, transcriptional repressor, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2rmr_A 2rms_A
Probab=1.00  E-value=1  Score=188.12  Aligned_cols=76  Identities=51%  Similarity=0.865  Sum_probs=73.7

Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCC
Q ss_conf             9999887447999999999984338464999999999977328994679999999960493699786521899864
Q 001681           38 GGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYE  113 (1031)
Q Consensus        38 ~~~~~l~v~dAlsYL~~VK~rF~d~P~vY~~FLeIMkdFksq~idt~gVi~RV~~LF~GhpdLI~GFNtFLP~gy~  113 (1031)
                      +..++++++||++||++||.+|+++|++|++||+||++|+++++++++||+||++||+||||||.|||+|||+||.
T Consensus         3 s~~~~~~~~dA~~yl~~VK~rF~~~p~~Y~~FL~im~~fk~~~~~~~~v~~rV~~Lf~~hpdLi~gFn~FLP~~~~   78 (80)
T 2cr7_A            3 SGSSGVHVEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRVSQLFHEHPDLIVGFNAFLPSGPS   78 (80)
T ss_dssp             CCCCCCCSCCSHHHHHHHHHHTSSCHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHGGGCHHHHHHHHHHSSCSSS
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCC
T ss_conf             8889988999999999999998258599999999999998669989999999999986788999999988869878


No 3  
>2f05_A Paired amphipathic helix protein SIN3B; helix bundle, transcription repressor; NMR {Mus musculus} SCOP: a.59.1.1
Probab=1.00  E-value=1  Score=181.91  Aligned_cols=80  Identities=29%  Similarity=0.598  Sum_probs=75.3

Q ss_pred             CCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHH----------HHHHHHHHHHHCCHHHHHHHHHCCC
Q ss_conf             998874479999999999843384649999999999773289946----------7999999996049369978652189
Q 001681           40 AQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTA----------GVIARVKELFKGHRDLILGFNTFLP  109 (1031)
Q Consensus        40 ~~~l~v~dAlsYL~~VK~rF~d~P~vY~~FLeIMkdFksq~idt~----------gVi~RV~~LF~GhpdLI~GFNtFLP  109 (1031)
                      .++++++||++||++||.||+++|++|++||+||++|+++++|++          +||+||+.||+||||||.|||+|||
T Consensus         2 ~~~~~~~dA~~YvnkVK~rF~d~p~vY~~FL~IL~~yk~~~~d~~g~~~~~~s~~eV~~~V~~LF~~hpDLl~eFn~FLP   81 (105)
T 2f05_A            2 SDSVEFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLHTKGRPFRGMSEEEVFTEVANLFRGQEDLLSEFGQFLP   81 (105)
T ss_dssp             CSCHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSSSSSSSSCCCCHHHHHHHHHHHTTTCHHHHHHHHHHSC
T ss_pred             CCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCC
T ss_conf             99876899999999999998139499999999999998645665443223576999999999997669899999998787


Q ss_pred             CCCCCCCCCC
Q ss_conf             9864458999
Q 001681          110 KGYEITLPLE  119 (1031)
Q Consensus       110 ~gy~I~~~~~  119 (1031)
                      ++|+|.++..
T Consensus        82 ~~~~~~~~~~   91 (105)
T 2f05_A           82 EAKRSLFTGN   91 (105)
T ss_dssp             GGGC------
T ss_pred             CCCCCCCCCC
T ss_conf             7235688996


No 4  
>1e91_A Paired amphipathic helix protein SIN3B; eukaryotic transcriptional regulation, SIN3, PAH domains, protein-protein interactions; NMR {Mus musculus} SCOP: a.59.1.1 PDB: 1pd7_A
Probab=1.00  E-value=1  Score=176.48  Aligned_cols=74  Identities=32%  Similarity=0.700  Sum_probs=70.4

Q ss_pred             CCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHH----------HHHHHHHHHHCCHHHHHHHHHCCC
Q ss_conf             9988744799999999998433846499999999997732899467----------999999996049369978652189
Q 001681           40 AQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAG----------VIARVKELFKGHRDLILGFNTFLP  109 (1031)
Q Consensus        40 ~~~l~v~dAlsYL~~VK~rF~d~P~vY~~FLeIMkdFksq~idt~g----------Vi~RV~~LF~GhpdLI~GFNtFLP  109 (1031)
                      .++++++||++||++||.+|+++|++|++||+||++|+++++|++|          |++||+.||+||||||.|||+|||
T Consensus         2 ~~~~~~~~A~~yv~kVK~rF~~~p~~Y~~FL~il~~yk~~~~d~~~~~~~~~s~~eV~~~V~~Lf~~hpDLl~~F~~FLP   81 (85)
T 1e91_A            2 SDSVEFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLHTKGRPFRGMSEEEVFTEVANLFRGQEDLLSEFGQFLP   81 (85)
T ss_dssp             CSCHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHTTCSSSCCCSSCCCHHHHHHHHHHHTSSCHHHHHHHHHHSC
T ss_pred             CCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCC
T ss_conf             99764999999999999998049699999999999998735565542213575999999999998669999999997786


Q ss_pred             CCCC
Q ss_conf             9864
Q 001681          110 KGYE  113 (1031)
Q Consensus       110 ~gy~  113 (1031)
                      ++|+
T Consensus        82 ~~~~   85 (85)
T 1e91_A           82 EAKR   85 (85)
T ss_dssp             CCCC
T ss_pred             CCCC
T ss_conf             8669


No 5  
>2ld7_B Paired amphipathic helix protein SIN3A; transcription; NMR {Mus musculus}
Probab=1.00  E-value=1  Score=172.74  Aligned_cols=71  Identities=39%  Similarity=0.745  Sum_probs=67.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCC
Q ss_conf             44102356737999999897--999999999997552057898899999998524792679998631036552
Q 001681          344 AMKSMFSQELSFCEKVKDKL--RDDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLARCEK  414 (1031)
Q Consensus       344 s~k~~~~eElaFFDKVKk~L--~e~Y~EFLKcLNLYSQeIIsr~ELv~lV~~lLG~~PDLm~~FKeFLg~~e~  414 (1031)
                      +.|.++.+|++||+|||++|  +++|+|||||||||+|+||+++||+++|.+|||+|||||+||+.||+|||+
T Consensus         3 ~~k~~~~de~~Ff~kVK~~l~~~~~Y~eFLk~lnlf~q~~Id~~eLv~~V~~~lg~~pdL~~~Fk~Fl~~~e~   75 (75)
T 2ld7_B            3 ASKHGVGTESLFFDKVRKALRSAEAYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPELFNWFKNFLGYKES   75 (75)
T ss_dssp             STTTTSSHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHTTCSCHHHHHHHTHHHHTTCHHHHHHHHHHHTCCCC
T ss_pred             CCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCC
T ss_conf             2000638899999999998289778999999999860068679999999999984488999999998287888


No 6  
>1g1e_B SIN3A; four-helix bundle, protein-peptide complex, transcription; NMR {Mus musculus} SCOP: a.59.1.1 PDB: 1s5q_B 1s5r_B 2l9s_B
Probab=1.00  E-value=1  Score=163.62  Aligned_cols=74  Identities=31%  Similarity=0.617  Sum_probs=66.6

Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHC-------------CCCHHHHHHHHHHHHHCCHHHHHHH
Q ss_conf             999988744799999999998433846499999999997732-------------8994679999999960493699786
Q 001681           38 GGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQ-------------RIDTAGVIARVKELFKGHRDLILGF  104 (1031)
Q Consensus        38 ~~~~~l~v~dAlsYL~~VK~rF~d~P~vY~~FLeIMkdFksq-------------~idt~gVi~RV~~LF~GhpdLI~GF  104 (1031)
                      ++.++++++||++||++||.||+++|++|.+||+||++|+.+             .|++.+|++||+.||+||||||.||
T Consensus         3 ~~~~~~~~~~A~~YvnkVK~rF~~~p~~Y~~FL~IL~~y~~~~~~~~~~~~~~~~~~~~~~V~~~V~~LF~~h~DLl~~F   82 (89)
T 1g1e_B            3 QNNQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVYAQVARLFKNQEDLLSEF   82 (89)
T ss_dssp             CCCCTHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCSCCHHHHHHHHHHHTTTCHHHHHHH
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHH
T ss_conf             77899878999999999999985593999999999999986567510000112235539999999999985499999999


Q ss_pred             HHCCCCC
Q ss_conf             5218998
Q 001681          105 NTFLPKG  111 (1031)
Q Consensus       105 NtFLP~g  111 (1031)
                      |+|||++
T Consensus        83 ~~FLP~~   89 (89)
T 1g1e_B           83 GQFLPDA   89 (89)
T ss_dssp             HTTCCCC
T ss_pred             HHHCCCC
T ss_conf             9878698


No 7  
>1g1e_B SIN3A; four-helix bundle, protein-peptide complex, transcription; NMR {Mus musculus} SCOP: a.59.1.1 PDB: 1s5q_B 1s5r_B 2l9s_B
Probab=1.00  E-value=1  Score=153.96  Aligned_cols=73  Identities=55%  Similarity=0.999  Sum_probs=68.0

Q ss_pred             CCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCH-------------HHHHHHHHHHHCCCHHHHHHHC
Q ss_conf             999811688987899998651999589999999997653148788-------------8999999997306916999970
Q 001681          125 PKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSI-------------TEVYQEVEALFQDHPDLLEEFT  191 (1031)
Q Consensus       125 ~k~~vef~~Ai~FVnKVK~RF~~~PevYk~FLeIL~~y~~~~ksi-------------~eV~~~Va~LF~~hPDLL~eF~  191 (1031)
                      ..++++|++|++||+|||.||+++|++|++||+||++|+++++++             .+||++|+.||+||||||.||+
T Consensus         4 ~~~~~~~~~A~~YvnkVK~rF~~~p~~Y~~FL~IL~~y~~~~~~~~~~~~~~~~~~~~~~V~~~V~~LF~~h~DLl~~F~   83 (89)
T 1g1e_B            4 NNQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVYAQVARLFKNQEDLLSEFG   83 (89)
T ss_dssp             CCCTHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCSCCHHHHHHHHHHHTTTCHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHH
T ss_conf             78998789999999999999855939999999999999865675100001122355399999999999854999999999


Q ss_pred             HHCCCC
Q ss_conf             108999
Q 001681          192 HFLPDS  197 (1031)
Q Consensus       192 ~FLP~~  197 (1031)
                      .|||++
T Consensus        84 ~FLP~~   89 (89)
T 1g1e_B           84 QFLPDA   89 (89)
T ss_dssp             TTCCCC
T ss_pred             HHCCCC
T ss_conf             878698


No 8  
>2f05_A Paired amphipathic helix protein SIN3B; helix bundle, transcription repressor; NMR {Mus musculus} SCOP: a.59.1.1
Probab=1.00  E-value=1  Score=153.55  Aligned_cols=77  Identities=48%  Similarity=0.808  Sum_probs=70.8

Q ss_pred             CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC----------CCHHHHHHHHHHHHCCCHHHHHHHCHHCC
Q ss_conf             99811688987899998651999589999999997653148----------78889999999973069169999701089
Q 001681          126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKEN----------KSITEVYQEVEALFQDHPDLLEEFTHFLP  195 (1031)
Q Consensus       126 k~~vef~~Ai~FVnKVK~RF~~~PevYk~FLeIL~~y~~~~----------ksi~eV~~~Va~LF~~hPDLL~eF~~FLP  195 (1031)
                      .++++|++|++||+|||.||+++|++|++||+||++|++++          +++.+||++|+.||+||||||.||++|||
T Consensus         2 ~~~~~~~dA~~YvnkVK~rF~d~p~vY~~FL~IL~~yk~~~~d~~g~~~~~~s~~eV~~~V~~LF~~hpDLl~eFn~FLP   81 (105)
T 2f05_A            2 SDSVEFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLHTKGRPFRGMSEEEVFTEVANLFRGQEDLLSEFGQFLP   81 (105)
T ss_dssp             CSCHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSSSSSSSSCCCCHHHHHHHHHHHTTTCHHHHHHHHHHSC
T ss_pred             CCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCC
T ss_conf             99876899999999999998139499999999999998645665443223576999999999997669899999998787


Q ss_pred             CCCCCCC
Q ss_conf             9989986
Q 001681          196 DSSGAAS  202 (1031)
Q Consensus       196 ~~~~~~~  202 (1031)
                      +......
T Consensus        82 ~~~~~~~   88 (105)
T 2f05_A           82 EAKRSLF   88 (105)
T ss_dssp             GGGC---
T ss_pred             CCCCCCC
T ss_conf             7235688


No 9  
>1e91_A Paired amphipathic helix protein SIN3B; eukaryotic transcriptional regulation, SIN3, PAH domains, protein-protein interactions; NMR {Mus musculus} SCOP: a.59.1.1 PDB: 1pd7_A
Probab=1.00  E-value=1  Score=153.03  Aligned_cols=74  Identities=50%  Similarity=0.854  Sum_probs=69.1

Q ss_pred             CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC----------CCHHHHHHHHHHHHCCCHHHHHHHCHHCC
Q ss_conf             99811688987899998651999589999999997653148----------78889999999973069169999701089
Q 001681          126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKEN----------KSITEVYQEVEALFQDHPDLLEEFTHFLP  195 (1031)
Q Consensus       126 k~~vef~~Ai~FVnKVK~RF~~~PevYk~FLeIL~~y~~~~----------ksi~eV~~~Va~LF~~hPDLL~eF~~FLP  195 (1031)
                      .++++|++|++||+|||.||+++|++|++||+||++|++++          +++.+||++|+.||+||||||+||+.|||
T Consensus         2 ~~~~~~~~A~~yv~kVK~rF~~~p~~Y~~FL~il~~yk~~~~d~~~~~~~~~s~~eV~~~V~~Lf~~hpDLl~~F~~FLP   81 (85)
T 1e91_A            2 SDSVEFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLHTKGRPFRGMSEEEVFTEVANLFRGQEDLLSEFGQFLP   81 (85)
T ss_dssp             CSCHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHTTCSSSCCCSSCCCHHHHHHHHHHHTSSCHHHHHHHHHHSC
T ss_pred             CCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCC
T ss_conf             99764999999999999998049699999999999998735565542213575999999999998669999999997786


Q ss_pred             CCCC
Q ss_conf             9989
Q 001681          196 DSSG  199 (1031)
Q Consensus       196 ~~~~  199 (1031)
                      +++.
T Consensus        82 ~~~~   85 (85)
T 1e91_A           82 EAKR   85 (85)
T ss_dssp             CCCC
T ss_pred             CCCC
T ss_conf             8669


No 10 
>2cr7_A Paired amphipathic helix protein SIN3B; paired amphipathic helix repeat, transcriptional repressor, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2rmr_A 2rms_A
Probab=1.00  E-value=1  Score=146.60  Aligned_cols=74  Identities=31%  Similarity=0.691  Sum_probs=70.3

Q ss_pred             CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHCHHCCCCCC
Q ss_conf             99811688987899998651999589999999997653148788899999999730691699997010899989
Q 001681          126 KKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSG  199 (1031)
Q Consensus       126 k~~vef~~Ai~FVnKVK~RF~~~PevYk~FLeIL~~y~~~~ksi~eV~~~Va~LF~~hPDLL~eF~~FLP~~~~  199 (1031)
                      .+++++++|++||++||.||+++|++|++||+||++|+.+.+++.+||++|+.||+||||||.+|+.|||.+..
T Consensus         5 ~~~~~~~dA~~yl~~VK~rF~~~p~~Y~~FL~im~~fk~~~~~~~~v~~rV~~Lf~~hpdLi~gFn~FLP~~~~   78 (80)
T 2cr7_A            5 SSGVHVEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRVSQLFHEHPDLIVGFNAFLPSGPS   78 (80)
T ss_dssp             CCCCCSCCSHHHHHHHHHHTSSCHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHGGGCHHHHHHHHHHSSCSSS
T ss_pred             CCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCC
T ss_conf             89988999999999999998258599999999999998669989999999999986788999999988869878


Done!