Your job contains 1 sequence.
>001683
MDEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDL
ICKDKVQAESWFLGLRAAISSCRRSRTFSCLREKRGVQSCVSSPASYIRRKHNLGLLEDA
TELSQVRSLCGSPSLSLSERCFSDGLSYSSDSFYSSESSSSQIQNLSNIITPSSPHMETE
NFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGGAVDGS
VSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM
DVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPR
KLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRG
LKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTR
LVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKG
ISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSIT
AAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNKGK
PSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQGSLSEEVKEEKGALTPSRGQSFTS
KQSRNVERKPGECLESASSLSSGLQRWGQVSCPIRFKTHCHEKSVEPTPIPKTQMSTHSP
LLRKISLGSNFIPIASTVEKDLSESNKMLNEEVQRLRDQARNLEKQCQIGNQKVQECQQK
IEEAWSLAREEAEKCKAAKEIIKALAVRLHTLSEKISAAKEAKEGVDANLPPKLDTDKHP
EVKLPKDRKVDSLCSSPIVFSNKLKSVYGRELCHDNSSGSVEDSKVARTEPQQKGTKASK
LEYAEQYEPGIYITFTTLPSGQKGLKRVRFSRRRFTEKAAERWWEENQVVVYQKYGIEEY
SNLNQNQMRS
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 001683
(1030 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2165770 - symbol:AT5G42140 "AT5G42140" species... 1493 3.2e-194 3
TAIR|locus:505006603 - symbol:AT5G12350 "AT5G12350" speci... 1574 6.5e-188 2
TAIR|locus:2025277 - symbol:PRAF1 "AT1G76950" species:370... 1454 1.1e-187 3
TAIR|locus:2086253 - symbol:AT3G23270 "AT3G23270" species... 1487 4.2e-171 2
TAIR|locus:2009739 - symbol:AT1G65920 species:3702 "Arabi... 1553 2.0e-159 1
TAIR|locus:2079147 - symbol:AT3G47660 "AT3G47660" species... 1174 8.1e-140 2
TAIR|locus:2163986 - symbol:UVR8 "UVB-RESISTANCE 8" speci... 467 3.5e-45 2
ZFIN|ZDB-GENE-070718-6 - symbol:herc2 "hect domain and RL... 477 6.3e-38 3
UNIPROTKB|D4ACN3 - symbol:Herc2 "Protein Herc2" species:1... 470 1.7e-37 3
UNIPROTKB|E2RDC2 - symbol:HERC2 "Uncharacterized protein"... 472 4.6e-37 3
UNIPROTKB|E1C4H7 - symbol:HERC1 "Uncharacterized protein"... 464 6.3e-37 2
UNIPROTKB|G3MX12 - symbol:HERC2 "Uncharacterized protein"... 465 7.8e-37 2
UNIPROTKB|O95714 - symbol:HERC2 "E3 ubiquitin-protein lig... 471 8.1e-37 2
UNIPROTKB|E1B782 - symbol:HERC2 "Uncharacterized protein"... 465 8.2e-37 2
RGD|1307989 - symbol:Herc2 "HECT and RLD domain containin... 470 8.7e-37 2
UNIPROTKB|F1M560 - symbol:Herc2 "Protein Herc2" species:1... 470 8.9e-37 2
UNIPROTKB|E1BW48 - symbol:HERC2 "Uncharacterized protein"... 471 2.0e-36 3
UNIPROTKB|E1C8K2 - symbol:HERC2 "Uncharacterized protein"... 471 2.0e-36 3
FB|FBgn0031107 - symbol:HERC2 "HECT and RLD domain contai... 454 2.3e-36 2
MGI|MGI:103234 - symbol:Herc2 "hect (homologous to the E6... 470 2.5e-36 3
UNIPROTKB|Q15751 - symbol:HERC1 "Probable E3 ubiquitin-pr... 454 7.6e-36 2
UNIPROTKB|J9NWD8 - symbol:HERC1 "Uncharacterized protein"... 451 1.1e-35 2
UNIPROTKB|F1MNS0 - symbol:HERC1 "Uncharacterized protein"... 452 1.3e-35 2
UNIPROTKB|F1S098 - symbol:HERC1 "Uncharacterized protein"... 452 1.3e-35 2
UNIPROTKB|E2QYQ5 - symbol:HERC1 "Uncharacterized protein"... 451 1.6e-35 2
TAIR|locus:2159295 - symbol:RUG3 "RCC1/UVR8/GEF-like 3" s... 386 1.3e-34 1
RGD|1310971 - symbol:Herc4 "HECT and RLD domain containin... 391 2.0e-32 1
DICTYBASE|DDB_G0269934 - symbol:DDB_G0269934 "Ras GTPase ... 293 5.7e-32 4
UNIPROTKB|Q5GLZ8 - symbol:HERC4 "Probable E3 ubiquitin-pr... 385 8.8e-32 1
MGI|MGI:1914595 - symbol:Herc4 "hect domain and RLD 4" sp... 383 1.4e-31 1
ZFIN|ZDB-GENE-081015-2 - symbol:rpgrb "retinitis pigmento... 379 2.1e-31 2
UNIPROTKB|E2RFW5 - symbol:HERC4 "Uncharacterized protein"... 381 2.3e-31 1
UNIPROTKB|E2RFV1 - symbol:HERC4 "Uncharacterized protein"... 381 2.4e-31 1
UNIPROTKB|E1BAV2 - symbol:HERC4 "Uncharacterized protein"... 376 8.3e-31 1
UNIPROTKB|Q9UII4 - symbol:HERC5 "E3 ISG15--protein ligase... 365 7.6e-30 2
RGD|1306366 - symbol:Herc1 "HECT and RLD domain containin... 367 9.8e-30 1
RGD|1307803 - symbol:Herc3 "HECT and RLD domain containin... 363 1.6e-29 1
UNIPROTKB|F1NBC5 - symbol:HERC3 "Uncharacterized protein"... 374 3.2e-29 2
UNIPROTKB|E1C514 - symbol:HERC3 "Uncharacterized protein"... 373 4.2e-29 2
UNIPROTKB|F1RW66 - symbol:HERC3 "Uncharacterized protein"... 365 5.7e-29 2
RGD|1561739 - symbol:Herc6 "HECT and RLD domain containin... 354 9.8e-29 2
UNIPROTKB|F1N7C1 - symbol:HERC6 "Uncharacterized protein"... 356 1.1e-28 1
UNIPROTKB|F1NCH3 - symbol:HERC4 "Uncharacterized protein"... 369 1.8e-28 2
TAIR|locus:504956339 - symbol:RUG1 "AT5G08710" species:37... 326 3.4e-28 1
ZFIN|ZDB-GENE-090313-139 - symbol:herc3 "hect domain and ... 351 4.1e-28 1
UNIPROTKB|E2RMB0 - symbol:HERC3 "Uncharacterized protein"... 364 6.4e-28 2
UNIPROTKB|A2VDP7 - symbol:HERC3 "HERC3 protein" species:9... 356 7.0e-28 2
UNIPROTKB|Q15034 - symbol:HERC3 "Probable E3 ubiquitin-pr... 360 1.1e-27 2
ZFIN|ZDB-GENE-070912-423 - symbol:rpgra "retinitis pigmen... 357 1.4e-27 3
FB|FBgn0035207 - symbol:CG9153 species:7227 "Drosophila m... 345 1.9e-27 1
UNIPROTKB|F1N1N9 - symbol:HERC5 "Uncharacterized protein"... 358 2.1e-27 2
TAIR|locus:2146142 - symbol:AT5G16040 "AT5G16040" species... 318 2.5e-27 1
UNIPROTKB|F1LPM8 - symbol:Herc6 "Protein Herc6" species:1... 341 2.6e-27 2
UNIPROTKB|F1PBB3 - symbol:HERC6 "Uncharacterized protein"... 346 1.2e-26 2
UNIPROTKB|F1PB99 - symbol:HERC5 "Uncharacterized protein"... 333 3.5e-26 1
TAIR|locus:2090136 - symbol:AT3G15430 "AT3G15430" species... 323 3.6e-26 1
UNIPROTKB|F1NUG6 - symbol:Gga.50841 "Uncharacterized prot... 321 8.8e-26 2
RGD|1308467 - symbol:Rcbtb1 "regulator of chromosome cond... 321 1.1e-25 1
MGI|MGI:1914388 - symbol:Herc6 "hect domain and RLD 6" sp... 326 1.9e-25 1
ZFIN|ZDB-GENE-030131-7951 - symbol:rcbtb1 "regulator of c... 318 2.4e-25 1
MGI|MGI:1918580 - symbol:Rcbtb1 "regulator of chromosome ... 316 4.1e-25 1
TAIR|locus:2076889 - symbol:AT3G02510 "AT3G02510" species... 296 5.6e-25 1
UNIPROTKB|E1BRZ2 - symbol:NEK8 "Uncharacterized protein" ... 317 8.2e-25 1
UNIPROTKB|F1PV11 - symbol:RCBTB1 "Uncharacterized protein... 310 1.9e-24 1
UNIPROTKB|E1BVG2 - symbol:RCBTB1 "Uncharacterized protein... 309 2.5e-24 1
UNIPROTKB|Q9N1T2 - symbol:RPGR "X-linked retinitis pigmen... 322 3.0e-24 2
UNIPROTKB|E1BKF7 - symbol:RCBTB1 "Uncharacterized protein... 308 3.3e-24 1
UNIPROTKB|Q92834 - symbol:RPGR "X-linked retinitis pigmen... 325 3.9e-24 2
UNIPROTKB|Q8NDN9 - symbol:RCBTB1 "RCC1 and BTB domain-con... 307 4.2e-24 1
UNIPROTKB|I3LCV3 - symbol:RCBTB1 "Uncharacterized protein... 314 6.7e-24 2
UNIPROTKB|Q86SG6 - symbol:NEK8 "Serine/threonine-protein ... 308 7.9e-24 1
MGI|MGI:1890646 - symbol:Nek8 "NIMA (never in mitosis gen... 308 8.1e-24 1
UNIPROTKB|F1RNC5 - symbol:NEK8 "Uncharacterized protein" ... 308 8.2e-24 1
RGD|1306897 - symbol:Nek8 "NIMA-related kinase 8" species... 307 1.0e-23 1
UNIPROTKB|E1B827 - symbol:NEK8 "Uncharacterized protein" ... 306 1.3e-23 1
UNIPROTKB|E2R5W9 - symbol:RCCD1 "Uncharacterized protein"... 185 1.3e-23 2
UNIPROTKB|E2QZC2 - symbol:NEK8 "Uncharacterized protein" ... 306 1.4e-23 1
UNIPROTKB|Q8IVU3 - symbol:HERC6 "Probable E3 ubiquitin-pr... 317 1.8e-23 2
MGI|MGI:1917200 - symbol:Rcbtb2 "regulator of chromosome ... 307 2.9e-23 2
ZFIN|ZDB-GENE-020509-1 - symbol:nek8 "NIMA (never in mito... 297 1.3e-22 1
UNIPROTKB|O95199 - symbol:RCBTB2 "RCC1 and BTB domain-con... 300 1.9e-22 2
ZFIN|ZDB-GENE-090311-16 - symbol:si:ch211-281g13.4 "si:ch... 295 4.2e-22 1
UNIPROTKB|E1B8U7 - symbol:RCCD1 "Uncharacterized protein"... 175 5.9e-22 2
RGD|1309901 - symbol:Rccd1 "RCC1 domain containing 1" spe... 230 7.2e-22 2
UNIPROTKB|Q7ZZC8 - symbol:nek9 "Serine/threonine-protein ... 299 7.6e-22 2
ZFIN|ZDB-GENE-070615-14 - symbol:zgc:163136 "zgc:163136" ... 292 9.0e-22 1
ZFIN|ZDB-GENE-061220-11 - symbol:sergef "secretion regula... 279 1.6e-21 1
MGI|MGI:1344037 - symbol:Rpgr "retinitis pigmentosa GTPas... 298 2.4e-21 2
UNIPROTKB|G3V2I3 - symbol:RCCD1 "RCC1 domain-containing p... 167 2.9e-21 2
UNIPROTKB|A6NED2 - symbol:RCCD1 "RCC1 domain-containing p... 167 3.0e-21 2
ZFIN|ZDB-GENE-040426-2213 - symbol:rcc2 "regulator of chr... 280 3.3e-21 1
TAIR|locus:2076532 - symbol:AT3G02300 "AT3G02300" species... 278 4.4e-21 1
TAIR|locus:2205794 - symbol:AT1G27060 species:3702 "Arabi... 271 4.7e-21 1
UNIPROTKB|E2RSG1 - symbol:ALS2 "Uncharacterized protein" ... 231 5.2e-21 3
UNIPROTKB|C9JW69 - symbol:RCC1 "Regulator of chromosome c... 267 7.0e-21 1
UNIPROTKB|Q5BIW4 - symbol:ALS2 "Alsin" species:9598 "Pan ... 226 8.7e-21 3
WB|WBGene00021685 - symbol:herc-1 species:6239 "Caenorhab... 268 9.7e-21 3
UNIPROTKB|Q9BL11 - symbol:herc-1 "Protein HERC-1" species... 268 9.7e-21 3
UNIPROTKB|F1SI31 - symbol:ALS2 "Uncharacterized protein" ... 229 9.9e-21 2
UNIPROTKB|P18754 - symbol:RCC1 "Regulator of chromosome c... 272 1.1e-20 1
WARNING: Descriptions of 178 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2165770 [details] [associations]
symbol:AT5G42140 "AT5G42140" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005576
"extracellular region" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=ISS] [GO:0008536 "Ran GTPase binding" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007165 "signal
transduction" evidence=ISS] [GO:0035091 "phosphatidylinositol
binding" evidence=ISS] InterPro:IPR000306 Pfam:PF01363
SMART:SM00064 INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0046872 EMBL:AB017067 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.30.40.10 InterPro:IPR017455
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
PROSITE:PS50178 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 InterPro:IPR013591 Pfam:PF08381 PROSITE:PS51514
HSSP:Q15075 ProtClustDB:CLSN2686442 IPI:IPI00533393
RefSeq:NP_199029.1 UniGene:At.28039 ProteinModelPortal:Q9FHX1
SMR:Q9FHX1 PRIDE:Q9FHX1 EnsemblPlants:AT5G42140.1 GeneID:834219
KEGG:ath:AT5G42140 TAIR:At5g42140 HOGENOM:HOG000240974
InParanoid:Q9FHX1 OMA:RNEVFTW PhylomeDB:Q9FHX1
Genevestigator:Q9FHX1 Uniprot:Q9FHX1
Length = 1073
Score = 1493 (530.6 bits), Expect = 3.2e-194, Sum P(3) = 3.2e-194
Identities = 299/685 (43%), Positives = 430/685 (62%)
Query: 216 DILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAA 275
D L DV IWGE + D ++ ++ D L+PK LES V+LDV +I+ G KHAA
Sbjct: 226 DALGDVYIWGEVLCENVTKFGADKNIGYLGSRSDVLIPKPLESNVVLDVHHIACGVKHAA 285
Query: 276 LVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEI 335
LV+++GEVF WGE GRLGH + DV+ P+L+E L+ ++ V+CGEF TCA+T +GEI
Sbjct: 286 LVSRQGEVFTWGEASGGRLGHGMGKDVTGPQLIESLAATSIDFVACGEFHTCAVTMTGEI 345
Query: 336 YTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGD 395
YTWG H A L+G SHW+P+++ L+G++++ V+CG WHTA+++++GQLFT+GD
Sbjct: 346 YTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQIASVSCGPWHTALITSTGQLFTFGD 405
Query: 396 GTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFT 455
GTFGVLGHG+ + V P+EVESL GL+ +VACG WH AAIV+++V S+ GKLFT
Sbjct: 406 GTFGVLGHGDKETVFYPREVESLSGLRTIAVACGVWHAAAIVEVIVTHSSSSVSSGKLFT 465
Query: 456 WGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQ 515
WGD DK RLGH D E +L PTCV+ L+D F + +CG LTVGLT GKVYTMGS V+GQ
Sbjct: 466 WGDGDKSRLGHGDKEPRLKPTCVSALIDHTFHRVACGHSLTVGLTTSGKVYTMGSTVYGQ 525
Query: 516 LGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQE 575
LGNP A + +VE KL ++ V+ I+ G+YHVAVLTS V+TWGK ANG+LG GD ++
Sbjct: 526 LGNPNADGKLPCLVEDKLTKDCVEEIACGAYHVAVLTSRNEVFTWGKGANGRLGHGDVED 585
Query: 576 RETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYN 635
R+ PT V+AL++R V+++ CGS+ TAAICLHK +S +QS CS CR FGF RK+HNCYN
Sbjct: 586 RKAPTLVDALKERHVKNIACGSNFTAAICLHKWVSGTEQSQCSACRQAFGFTRKRHNCYN 645
Query: 636 CGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNL 695
CGL C +CS+KK + A+L PN GKP RVCD+C++ L K++ + + ++N PR
Sbjct: 646 CGLVHCHSCSSKKSLKAALAPNPGKPYRVCDSCHSKLSKVSEAN-IDSRKNVMPRLSGEN 704
Query: 696 QGSLSE-EVKEEKGALTPSRGQSFTSKQSRNVERKPGECLESASSLSSGLQRWGQVSCPI 754
+ L + E++ K + PS KQ N + G+ ++ S + + Q+ +
Sbjct: 705 KDRLDKTEIRLAKSGI-PSNIDLI--KQLDNRAARQGKKADTFSLVRTSQTPLTQLKDAL 761
Query: 755 RFKTHCHEKSVEPTPIPKTQMSTHSPLLRKISLGSNFIPI--------ASTVEKDLSESN 806
+P P + SP R+ S + PI ++++ + L ++N
Sbjct: 762 TNVADLRRGPPKPAVTPSSSRPV-SPFSRRSSPPRSVTPIPLNVGLGFSTSIAESLKKTN 820
Query: 807 KMLNEEVQRLRDQARNLEKQCQIGNQKVQECQQKIEEAWSLARXXXXXXXXXXXXXXXLA 866
++LN+EV RLR QA +L +C++ +VQ+ +K++EA SLA L
Sbjct: 821 ELLNQEVVRLRAQAESLRHRCEVQEFEVQKSVKKVQEAMSLAAEESAKSEAAKEVIKSLT 880
Query: 867 VRLHTLSEKIS-AAKEAKEGVDANL 890
++ ++ + A EA+ ANL
Sbjct: 881 AQVKDIAALLPPGAYEAETTRTANL 905
Score = 223 (83.6 bits), Expect = 3.2e-194, Sum P(3) = 3.2e-194
Identities = 45/79 (56%), Positives = 58/79 (73%)
Query: 2 DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
DE LIW S EK+L+L +V+KI+ GQRT FQ +PD+ SFS+IY+N +R+LDLI
Sbjct: 41 DETSLIWISNGGEKRLKLATVSKIVPGQRTAVFQRYLRPDKDYLSFSLIYSNRKRTLDLI 100
Query: 62 CKDKVQAESWFLGLRAAIS 80
CKDKV+AE W GL+A IS
Sbjct: 101 CKDKVEAEVWIAGLKALIS 119
Score = 204 (76.9 bits), Expect = 3.2e-194, Sum P(3) = 3.2e-194
Identities = 42/83 (50%), Positives = 55/83 (66%)
Query: 937 SSGSVEDSKVARTEPQQKGTKASKLE--YAEQYEPGIYITFTTLPSGQKGLKRVRFSRRR 994
S+G ED + +R+ + AS++E + EQYEPG+YIT L G + LKRVRFSRRR
Sbjct: 974 SNGFSEDGRNSRSSAAS-ASNASQVEAEWIEQYEPGVYITLLALGDGTRDLKRVRFSRRR 1032
Query: 995 FTEKAAERWWEENQVVVYQKYGI 1017
F E+ AE WW EN+ VY+KY I
Sbjct: 1033 FREQQAETWWSENRERVYEKYNI 1055
Score = 45 (20.9 bits), Expect = 1.2e-29, Sum P(3) = 1.2e-29
Identities = 22/85 (25%), Positives = 36/85 (42%)
Query: 676 THSGRLLKQENQSPRNLLNLQG---SLSEEVKEEKGA---LTPSRGQS--FTSKQS-RNV 726
T + LL Q+ + N G S S+ + + A P+R + + + QS RN
Sbjct: 900 TRTANLLNGFEQNGFHFTNANGQRQSRSDSMSDTSLASPLAMPARSMNGLWRNSQSPRNT 959
Query: 727 ERKPGECLESASSLSSGLQRWGQVS 751
+ GE L +S+G G+ S
Sbjct: 960 DASMGELLSEGVRISNGFSEDGRNS 984
Score = 40 (19.1 bits), Expect = 5.7e-13, Sum P(2) = 5.7e-13
Identities = 11/36 (30%), Positives = 15/36 (41%)
Query: 912 SLCSSPIVFSNKLKSVYGRELCHDNSSGSVEDSKVA 947
S C F+ K + Y L H +S S + K A
Sbjct: 628 SACRQAFGFTRKRHNCYNCGLVHCHSCSSKKSLKAA 663
>TAIR|locus:505006603 [details] [associations]
symbol:AT5G12350 "AT5G12350" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=ISS] [GO:0008536 "Ran GTPase binding" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0009630 "gravitropism" evidence=RCA]
[GO:0009887 "organ morphogenesis" evidence=RCA] [GO:0009888 "tissue
development" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0010638 "positive regulation of
organelle organization" evidence=RCA] [GO:0033044 "regulation of
chromosome organization" evidence=RCA] [GO:0042546 "cell wall
biogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045492 "xylan biosynthetic
process" evidence=RCA] InterPro:IPR000306 InterPro:IPR001849
InterPro:IPR024774 Pfam:PF01363 Pfam:PF12814 SMART:SM00064
SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005886
GO:GO:0005938 EMBL:CP002688 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0046872 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0032065 InterPro:IPR013591 Pfam:PF08381
PROSITE:PS51514 IPI:IPI00540281 RefSeq:NP_568268.3 UniGene:At.22310
UniGene:At.51056 ProteinModelPortal:F4K0X5 SMR:F4K0X5
EnsemblPlants:AT5G12350.1 GeneID:831110 KEGG:ath:AT5G12350
OMA:NTNGHPR Uniprot:F4K0X5
Length = 1075
Score = 1574 (559.1 bits), Expect = 6.5e-188, Sum P(2) = 6.5e-188
Identities = 342/836 (40%), Positives = 500/836 (59%)
Query: 216 DILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAA 275
D L DV IWGEG+ G +GG S ++D+LLPK LES ++LDVQNI+ G +HA
Sbjct: 262 DALGDVFIWGEGIGEGVLGGGNRRVGSSFDIKMDSLLPKALESTIVLDVQNIACGGQHAV 321
Query: 276 LVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEI 335
LVTK+GE F WGE +GRLGH V+ ++ PKL++ L+ N++ V+CGEF +CA+T SG++
Sbjct: 322 LVTKQGESFSWGEESEGRLGHGVDSNIQQPKLIDALNTTNIELVACGEFHSCAVTLSGDL 381
Query: 336 YTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGD 395
YTWG + G ++G SHW+P+++ L+G+ VS +ACG +HTA+V+++GQLFT+GD
Sbjct: 382 YTWGKGDFG--VLGHGNEVSHWVPKRVNFLLEGIHVSSIACGPYHTAVVTSAGQLFTFGD 439
Query: 396 GTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMV-DRCKSNAIGGKLF 454
GTFGVLGHG+ ++V P+EV+SL+GL+ ACG WHTAA+V++MV SN GKLF
Sbjct: 440 GTFGVLGHGDKKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLF 499
Query: 455 TWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHG 514
TWGD DKGRLGH + E KL+PTCV LV+ +F Q +CG LTV LT G VYTMGS V+G
Sbjct: 500 TWGDGDKGRLGHGNKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYG 559
Query: 515 QLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQ 574
QLGN A ++ VEGKL + FV+ I+ G+YHVAVLTS VYTWGK +NG+LG GD
Sbjct: 560 QLGNSHADGKTPNRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDVD 619
Query: 575 ERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCY 634
+R +PT VE+L+D+QV+S+ CG++ TAA+C+H+ S DQS CS CR PF F+RK+HNCY
Sbjct: 620 DRNSPTLVESLKDKQVKSIACGTNFTAAVCIHRWASGMDQSMCSGCRQPFSFKRKRHNCY 679
Query: 635 NCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLN 694
NCGL FC +C++KK + A + PN KP RVCD C+N L+K + + S R +N
Sbjct: 680 NCGLVFCHSCTSKKSLKACMAPNPNKPYRVCDKCFNKLKKTMETDPS-SHSSLSRRGSIN 738
Query: 695 LQGS--LSEEVKEEK---GALTP-SRGQSFTSKQSRNVERKPGECLES-ASSLSSGLQRW 747
QGS + ++ K + G L S +S SR+ + K E S S + SG +
Sbjct: 739 -QGSDPIDKDDKFDSRSDGQLARFSLMESMRQVDSRHKKNKKYEFNSSRVSPIPSGSSQR 797
Query: 748 GQVSCPIRFK-THCHEKSVEPTPIPKTQMSTH--SPLLRKISLGSNFIP------IAST- 797
G ++ F K +P +++ + SP+ R+ S + P +A+
Sbjct: 798 GALNIAKSFNPVFGASKKFFSASVPGSRIVSRATSPISRRPSPPRSTTPTPTLSGLATPK 857
Query: 798 -VEKDLSESNKMLNEEVQRLRDQARNLEKQCQIGNQKVQECQQKIEEAWSLARXXXXXXX 856
V D +N L++EV +LR Q +L ++ Q+ +++ ++++EA ++
Sbjct: 858 FVVDDTKRTNDNLSQEVVKLRSQVESLTRKAQLQEVELERTTKQLKEALAITNEETTRCK 917
Query: 857 XXXXXXXXLAVRLHTLSEKISAAKEAKEGVDANLPPKLDTDKHPEVKL-PKD--RKVDSL 913
L +L ++E++ A+ PP L++ ++ P + + +S
Sbjct: 918 AAKEVIKSLTAQLKDMAERLPVGS-ART---VKSPPSLNSFGSSPGRIDPFNILNQANSQ 973
Query: 914 CSSPIVFSNKLKSVYGRELCHDNSSGSVEDSKVARTEPQQKGTKASKLEYAEQYEPGIYI 973
S P N + + + G+ E + AR E E+ EQ EPG+YI
Sbjct: 974 ESEP----NGITTPMFSNGTMTPAFGNGEATNEARNEK----------EWVEQDEPGVYI 1019
Query: 974 TFTTLPSGQKGLKRVRFSRRRFTEKAAERWWEENQVVVYQKYGIEEYSNLNQNQMR 1029
T T L G + LKRVRFSR+RF+E AE+WW +N+ VY++Y + +++ R
Sbjct: 1020 TLTALAGGARDLKRVRFSRKRFSEIQAEQWWADNRGRVYEQYNVRMVDKASEDLPR 1075
Score = 270 (100.1 bits), Expect = 6.5e-188, Sum P(2) = 6.5e-188
Identities = 60/115 (52%), Positives = 77/115 (66%)
Query: 2 DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
DE LIW+SG +EK L+L+ V++II GQRT FQ P+P+++ QSFS+IY+ ERSLD+I
Sbjct: 53 DETVLIWFSGNEEKHLKLSHVSRIISGQRTPIFQRYPRPEKEYQSFSLIYS--ERSLDVI 110
Query: 62 CKDKVQAESWFLGLRAAISSC--RRSRTFSCLREKRGVQSCVSSPASYIRRKHNL 114
CKDK +AE WF GL+A IS C R RT S G S +SP +Y RR L
Sbjct: 111 CKDKDEAEVWFTGLKALISHCHQRNRRTES---RSDGTPSEANSPRTYTRRSSPL 162
>TAIR|locus:2025277 [details] [associations]
symbol:PRAF1 "AT1G76950" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=ISS]
[GO:0008536 "Ran GTPase binding" evidence=ISS] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR000306 Pfam:PF01363
SMART:SM00064 INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002684
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0046872
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR013591 Pfam:PF08381
PROSITE:PS51514 HSSP:Q15075 EMBL:AF323270 IPI:IPI00521580
RefSeq:NP_565144.1 UniGene:At.19186 ProteinModelPortal:Q947D2
SMR:Q947D2 PRIDE:Q947D2 EnsemblPlants:AT1G76950.1 GeneID:844030
KEGG:ath:AT1G76950 TAIR:At1g76950 InParanoid:Q947D2 OMA:WIPKRIA
PhylomeDB:Q947D2 ProtClustDB:CLSN2686442 Genevestigator:Q947D2
Uniprot:Q947D2
Length = 1103
Score = 1454 (516.9 bits), Expect = 1.1e-187, Sum P(3) = 1.1e-187
Identities = 303/738 (41%), Positives = 438/738 (59%)
Query: 206 TYGSPLIERKDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQ 265
++GS + D L DV IWGE + + +D + S T+ D L+PK LES ++LDV
Sbjct: 226 SHGSAA-DDSDALGDVYIWGEVICDNVVKVGIDKNASYLTTRTDVLVPKPLESNIVLDVH 284
Query: 266 NISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGIN-VQSVSCGEF 324
I+ G +HAA VT++GE+F WGE GRLGH + DV P+LVE L+ + V V+CGEF
Sbjct: 285 QIACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDVFHPRLVESLTATSSVDFVACGEF 344
Query: 325 QTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIV 384
TCA+T +GE+YTWG H L+G SHW+P+++ +L+G+ V+ V+CG WHTA++
Sbjct: 345 HTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGSLEGLHVASVSCGPWHTALI 404
Query: 385 STSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRC 444
++ G+LFT+GDGTFGVLGHG+ + V P+EVESL GL+ +V+CG WHTAA+V+I+V +
Sbjct: 405 TSYGRLFTFGDGTFGVLGHGDKETVQYPREVESLSGLRTIAVSCGVWHTAAVVEIIVTQS 464
Query: 445 KSNAIG-GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLG 503
S+++ GKLFTWGD DK RLGH D + +L PTCV L+D++F + +CG LTVGLT G
Sbjct: 465 NSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDYNFHKIACGHSLTVGLTTSG 524
Query: 504 KVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKN 563
+V+TMGS V+GQLGN + + +VE KL EFV+ IS G+YHVA LTS VYTWGK
Sbjct: 525 QVFTMGSTVYGQLGNLQTDGKLPCLVEDKLASEFVEEISCGAYHVAALTSRNEVYTWGKG 584
Query: 564 ANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMP 623
ANG+LG GD ++R+ PT VEAL+DR V+ + CGS+ TAAICLHK +S +QS CS CR+
Sbjct: 585 ANGRLGHGDLEDRKVPTIVEALKDRHVKYIACGSNYTAAICLHKWVSGAEQSQCSTCRLA 644
Query: 624 FGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKITHSGRLLK 683
FGF RK+HNCYNCGL C +CS+KK A+L P+ G+ RVCD+CY L K++ +
Sbjct: 645 FGFTRKRHNCYNCGLVHCHSCSSKKAFRAALAPSAGRLYRVCDSCYVKLSKVSEINDTNR 704
Query: 684 QENQSPRNLLNLQGSLSE-EVKEEK-GALTPSRGQSFTSKQSRNVERKPGECLESASSLS 741
+ + PR + L + E++ K G + SK ++ ++ L S L
Sbjct: 705 RNSAVPRLSGENRDRLDKSEIRLAKFGTSNMDLIKQLDSKAAKQGKKTDTFSLGRNSQLP 764
Query: 742 SGLQRWGQVSCPIRFKTHCHEKSVE-PTPIPKTQMSTHSPLLRKISLGSNFIPIAST--- 797
S LQ V I K + P+ I +S P R+ S + P+ ST
Sbjct: 765 SLLQLKDAVQSNIGDMRRATPKLAQAPSGISSRSVS---PFSRRSSPPRSATPMPSTSGL 821
Query: 798 -----VEKDLSESNKMLNEEVQRLRDQARNLEKQCQIGNQKVQECQQKIEEAWSLARXXX 852
+ ++ ++N++LN+E+ +LR Q +L ++C+ ++Q +K +EA +LA
Sbjct: 822 YFPVGIADNMKKTNEILNQEIVKLRTQVDSLTQKCEFQEVELQNSVKKTQEALALAEEES 881
Query: 853 XXXXXXXXXXXXLAVRLHTLSEKISAAKEAK-----EGVDAN---LPPKLDTDKHPEVKL 904
L +L ++EK+ + K G+D N P + HP
Sbjct: 882 AKSRAAKEAIKSLIAQLKDVAEKLPPGESVKLACLQNGLDQNGFHFPE--ENGFHPSRSE 939
Query: 905 PKDRKVDSLCSSPIVFSN 922
+ S+ F+N
Sbjct: 940 SMTSSISSVAPFDFAFAN 957
Score = 215 (80.7 bits), Expect = 1.1e-187, Sum P(3) = 1.1e-187
Identities = 44/86 (51%), Positives = 60/86 (69%)
Query: 2 DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
DEK LIW S EK+L+L SV+KI+ GQRT FQ +P++ SFS++Y ++SLDLI
Sbjct: 46 DEKSLIWISSSGEKRLKLASVSKIVPGQRTAVFQRYLRPEKDYLSFSLLYNGKKKSLDLI 105
Query: 62 CKDKVQAESWFLGLRAAISSCRRSRT 87
CKDKV+AE W GL+ IS+ + R+
Sbjct: 106 CKDKVEAEIWIGGLKTLISTGQGGRS 131
Score = 189 (71.6 bits), Expect = 1.1e-187, Sum P(3) = 1.1e-187
Identities = 37/72 (51%), Positives = 46/72 (63%)
Query: 956 TKASKLEYAEQYEPGIYITFTTLPSGQKGLKRVRFSRRRFTEKAAERWWEENQVVVYQKY 1015
T + E+ EQYEPG+YIT L G + L+RVRFSRRRF E AE WW EN+ VY+KY
Sbjct: 1018 TNQVEAEWIEQYEPGVYITLVALHDGTRDLRRVRFSRRRFGEHQAETWWSENREKVYEKY 1077
Query: 1016 GIE--EYSNLNQ 1025
+ E S +Q
Sbjct: 1078 NVRVSEKSTASQ 1089
>TAIR|locus:2086253 [details] [associations]
symbol:AT3G23270 "AT3G23270" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0008536 "Ran GTPase binding" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007165 "signal
transduction" evidence=ISS] [GO:0035091 "phosphatidylinositol
binding" evidence=ISS] [GO:0009827 "plant-type cell wall
modification" evidence=RCA] [GO:0009860 "pollen tube growth"
evidence=RCA] InterPro:IPR000306 InterPro:IPR001849
InterPro:IPR024774 Pfam:PF01363 Pfam:PF12814 PROSITE:PS50003
SMART:SM00064 SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005938 EMBL:CP002686 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0046872 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633 PROSITE:PS50012
GO:GO:0032065 InterPro:IPR013591 Pfam:PF08381 PROSITE:PS51514
IPI:IPI00516271 RefSeq:NP_188968.1 UniGene:At.53452
ProteinModelPortal:F4J2Y2 SMR:F4J2Y2 PRIDE:F4J2Y2
EnsemblPlants:AT3G23270.1 GeneID:821906 KEGG:ath:AT3G23270
OMA:PKFRAFR ArrayExpress:F4J2Y2 Uniprot:F4J2Y2
Length = 1045
Score = 1487 (528.5 bits), Expect = 4.2e-171, Sum P(2) = 4.2e-171
Identities = 329/830 (39%), Positives = 471/830 (56%)
Query: 204 TPTYGSPLIERKDI--LKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVM 261
TP+ S DI L DV +WGE G + DG+ S + D L P+ LES V+
Sbjct: 194 TPSCSSGGSGPDDIESLGDVYVWGEVWTEGILP---DGTASNETVKTDVLTPRPLESNVV 250
Query: 262 LDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSC 321
LDV I G +H ALVT++GEVF WGE GRLGH + +D+S PKLVE L+ N+ V+C
Sbjct: 251 LDVHQIVCGVRHVALVTRQGEVFTWGEEVGGRLGHGIQVDISRPKLVEFLALTNIDFVAC 310
Query: 322 GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT 381
GE+ TC ++ SG++++WG H L+G SHW+P+++ L+G++V VACG WH+
Sbjct: 311 GEYHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWIPKRVSGPLEGLQVLSVACGTWHS 370
Query: 382 AIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMV 441
A+ + +G+LFT+GDG FGVLGHGN ++VS PKEV+SL GLK VAC WHTAAIV++M
Sbjct: 371 ALATANGKLFTFGDGAFGVLGHGNRESVSYPKEVQSLNGLKTVKVACSIWHTAAIVEVMG 430
Query: 442 DRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTG 501
S + KLFTWGD DK RLGH + E LLPTCV+ L+D++F + +CG TV LT
Sbjct: 431 QTATSMS-SRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFHKIACGHTFTVALTT 489
Query: 502 LGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWG 561
G V+TMG HGQLGN + + +V+ +L EFV+ I+ G++HVAVLTS V+TWG
Sbjct: 490 SGHVFTMGGTAHGQLGNSISDGKLPCLVQDRLVGEFVEEIACGAHHVAVLTSRSEVFTWG 549
Query: 562 KNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCR 621
K ANG+LG GD++++ TPT VEALRDR V+S+ CGS+ T++IC+HK +S DQS CS CR
Sbjct: 550 KGANGRLGHGDTEDKRTPTLVEALRDRHVKSLSCGSNFTSSICIHKWVSGADQSICSGCR 609
Query: 622 MPFGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKITHSGRL 681
FGF RK+HNCYNCGL C ACS+KK + A+L P GKP RVCD CY+ L K SG
Sbjct: 610 QAFGFTRKRHNCYNCGLVHCHACSSKKALKAALAPTPGKPHRVCDACYSKL-KAAESGY- 667
Query: 682 LKQENQSPRNLLNLQGSLSEEVKEEKGALTPSRGQSFTSKQSRNVERKPGECLESASSLS 741
N + RN+ S+ V+ ++ S+ +K S +PG ES+++ +
Sbjct: 668 --SSNVN-RNVATPGRSIDGSVRTDRETTRSSKVLLSANKNSVMSSSRPGFTPESSNARA 724
Query: 742 S---GLQRWGQVSCPIRFKT--HCHEKSVEPT-------------PIPKTQMSTHSPLLR 783
S LQ+ ++ P + + V PT P P + SP R
Sbjct: 725 SQVPSLQQLKDIAFPSSLSAIQNAFKPVVAPTTTPPRTLVIGPSSPSPPPPPRSSSPYAR 784
Query: 784 KISLGSNFIPIASTVEKDLSESNKMLNEEVQRLRDQARNLEKQCQIGNQKVQECQQKIEE 843
+ S + +V L ++N+++N+E+ +L Q R C +++ Q+ ++
Sbjct: 785 RPS-PPRTSGFSRSVIDSLRKTNEVMNQEMTKLHSQQR-----CNNQGTEIERFQKAAKD 838
Query: 844 AWSLARXXXXXXXXXXXXXXXLAVRLHTLSEKIS---AAKEAKEGVDANLPPKLDTDKHP 900
A LA +A +L L EK+ + EA E +++ L+ +K
Sbjct: 839 ASELAARQSSKHKAATEALKSVAEQLKELKEKLPPEVSESEAFESINSQAEAYLNANKVS 898
Query: 901 EVKLPKDRKVDSLCSSPIVFSNKLKSVYGR--ELCHDNSSGSVEDSKVARTEPQQKGTKA 958
E +SP+ S + + Y + E NSS + S + ++
Sbjct: 899 E-------------TSPLTTSGQEQETYQKTEEQVPSNSSITETSSSSRAPSTEASSSRI 945
Query: 959 SKLEYAEQYEPGIYITFTTLPSGQKGLKRVRFSRRRFTEKAAERWWEENQ 1008
S E EQ+EPG+Y+T+ +G K +RVRFS++RF E AE WW +N+
Sbjct: 946 SGKESKEQFEPGVYVTYEVDMNGNKIFRRVRFSKKRFDEHQAEDWWTKNK 995
Score = 198 (74.8 bits), Expect = 4.2e-171, Sum P(2) = 4.2e-171
Identities = 44/92 (47%), Positives = 58/92 (63%)
Query: 2 DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
DEK LIW+S +EK L+L V++I+ GQRT F +P++ SFS++Y N ERSLDLI
Sbjct: 47 DEKTLIWFSRGEEKGLKLFEVSRIVPGQRT-RFL---RPEKDHLSFSLLYNNRERSLDLI 102
Query: 62 CKDKVQAESWFLGLRAAISSCRRSRTFSCLRE 93
CKDK + E WF L+ I R R S + E
Sbjct: 103 CKDKAETEVWFAALKFLIEKSRNRRARSEIPE 134
>TAIR|locus:2009739 [details] [associations]
symbol:AT1G65920 species:3702 "Arabidopsis thaliana"
[GO:0005543 "phospholipid binding" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=ISM] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005773 "vacuole" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] InterPro:IPR000306
InterPro:IPR001849 Pfam:PF01363 SMART:SM00064 SMART:SM00233
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0005773 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0046872 EMBL:AC009513
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184 InterPro:IPR013591
Pfam:PF08381 PROSITE:PS51514 HSSP:Q15075 HOGENOM:HOG000240974
IPI:IPI00526779 PIR:E96683 RefSeq:NP_176767.1 UniGene:At.35824
ProteinModelPortal:Q9SRZ7 SMR:Q9SRZ7 PaxDb:Q9SRZ7 PRIDE:Q9SRZ7
EnsemblPlants:AT1G65920.1 GeneID:842904 KEGG:ath:AT1G65920
TAIR:At1g65920 InParanoid:Q9SRZ7 OMA:AQADSWF PhylomeDB:Q9SRZ7
ProtClustDB:CLSN2679687 Genevestigator:Q9SRZ7 Uniprot:Q9SRZ7
Length = 1006
Score = 1553 (551.7 bits), Expect = 2.0e-159, P = 2.0e-159
Identities = 299/498 (60%), Positives = 376/498 (75%)
Query: 212 IERKDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGA 271
+ R ++LKD+MIWG I G +DGS +QN DAL PKLLESA M DVQ+ISLGA
Sbjct: 252 VTRSNVLKDIMIWGA------ITGLIDGSKNQN----DALSPKLLESATMFDVQSISLGA 301
Query: 272 KHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTK 331
KHAALVT++GEVFCWG G G+LG KVN+D+ PK VE L + V+SV+C + QTCA+T+
Sbjct: 302 KHAALVTRQGEVFCWGNGNSGKLGLKVNIDIDHPKRVESLEDVAVRSVACSDHQTCAVTE 361
Query: 332 SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG-VRVSKVACGEWHTAIVSTSGQL 390
SGE+Y WG + G + +S S +L RK+ D L G + V VACG WHTAIV++SGQL
Sbjct: 362 SGELYLWGID--GGTI---EQSGSQFLTRKISDVLGGSLTVLSVACGAWHTAIVTSSGQL 416
Query: 391 FTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIG 450
FTYG GTFGVLGHG+L++V++PKEVESLR +KV SV+CGPWHTAAIV+ DR NA
Sbjct: 417 FTYGSGTFGVLGHGSLESVTKPKEVESLRRMKVISVSCGPWHTAAIVETANDRKFYNAKS 476
Query: 451 -GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMG 509
GKLFTWGD DKGRLGH D +RKL+PTCVT L+D DF++ SCG LTV L+ G VYTMG
Sbjct: 477 CGKLFTWGDGDKGRLGHADSKRKLVPTCVTELIDHDFIKVSCGWTLTVALSISGTVYTMG 536
Query: 510 SAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLG 569
S++HGQLG P+AKD+S+ VV G L +FVK I+SGS+HVAVLTS G+VYTWGK NGQLG
Sbjct: 537 SSIHGQLGCPRAKDKSVNVVLGNLTRQFVKDIASGSHHVAVLTSFGNVYTWGKGMNGQLG 596
Query: 570 LGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRK 629
LGD ++R +P VE L DR VES+ CG ++TAAICLHK IS+ DQ++CS C+ FGF R+
Sbjct: 597 LGDVRDRNSPVLVEPLGDRLVESIACGLNLTAAICLHKEISLNDQTACSSCKSAFGFTRR 656
Query: 630 KHNCYNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSP 689
KHNCYNCGL FC+ACS+KK +NASL PNK K SRVCD+C++HL IT R +K +N +P
Sbjct: 657 KHNCYNCGLLFCNACSSKKAVNASLAPNKSKLSRVCDSCFDHLWSITEFSRNVKMDNHTP 716
Query: 690 RNLLNLQGSLSEEVKEEK 707
R + + +SE++ E++
Sbjct: 717 RMQM-VTRRVSEDLTEKQ 733
Score = 814 (291.6 bits), Expect = 4.3e-128, Sum P(2) = 4.3e-128
Identities = 172/344 (50%), Positives = 221/344 (64%)
Query: 1 MDEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDL 60
MDEK+LIWYSG++E+QLRL+SV I+ GQ T NFQ Q Q DRK+QSFS+IYANGE +LDL
Sbjct: 47 MDEKYLIWYSGEEERQLRLSSVITIVRGQITPNFQKQAQSDRKEQSFSLIYANGEHTLDL 106
Query: 61 ICKDKVQAESWFLGLRAAISSCRRSRTFSCLREKRGVQSCVSSPASYIRRKHNLGLLEDA 120
ICKDK QA+SWF GLRA I+ R R RG QSC++SPA ++RRK NLGLLE+
Sbjct: 107 ICKDKAQADSWFKGLRAVITKHHNIRNSVNHRSSRGAQSCINSPAGFMRRKQNLGLLEET 166
Query: 121 TELSQVRSLCGSPSLSLSERCXXXXXXXXXXXXXXXXXXXXXXXXXXXXITPSSPHMETE 180
+++Q+RSLCGSPS L ERC + P S + ET+
Sbjct: 167 PDVTQIRSLCGSPSTLLEERCLSNGLSCSSDSFAESDA-----------LGPVSSYYETD 215
Query: 181 -NFMKWELNYA--DTRCPKNESHRLVTPTYG--SPLIERKDILKDVMIWGEGVLGGDIGG 235
+F + + + C + +P + + R ++LKD+MIWG I G
Sbjct: 216 YDFRNSDCDRSTGSELCRFSSQRFAASPPLSIITQPVTRSNVLKDIMIWGA------ITG 269
Query: 236 AVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG 295
+DGS +QN DAL PKLLESA M DVQ+ISLGAKHAALVT++GEVFCWG G G+LG
Sbjct: 270 LIDGSKNQN----DALSPKLLESATMFDVQSISLGAKHAALVTRQGEVFCWGNGNSGKLG 325
Query: 296 HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
KVN+D+ PK VE L + V+SV+C + QTCA+T+SGE+Y WG
Sbjct: 326 LKVNIDIDHPKRVESLEDVAVRSVACSDHQTCAVTESGELYLWG 369
Score = 464 (168.4 bits), Expect = 4.3e-128, Sum P(2) = 4.3e-128
Identities = 157/540 (29%), Positives = 249/540 (46%)
Query: 503 GKVYTMGSAVHGQLGNPKAKDRSI-TVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWG 561
GK++T G G+LG+ +K + + T V + +F+K +S G L+ G+VYT G
Sbjct: 478 GKLFTWGDGDKGRLGHADSKRKLVPTCVTELIDHDFIK-VSCGWTLTVALSISGTVYTMG 536
Query: 562 KNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAIC-----------LHKSIS 610
+ +GQLG ++++ + L + V+ + GS A + ++ +
Sbjct: 537 SSIHGQLGCPRAKDKSVNVVLGNLTRQFVKDIASGSHHVAVLTSFGNVYTWGKGMNGQLG 596
Query: 611 VGDQSSCSQCRM--PFGFRRKKHNCYNCGLHFCSA-CSTKKI-INASLTPNKGKPS---- 662
+GD + + P G R + CGL+ +A C K+I +N + K +
Sbjct: 597 LGDVRDRNSPVLVEPLGDRLVESIA--CGLNLTAAICLHKEISLNDQTACSSCKSAFGFT 654
Query: 663 RVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQGSLSEEVKEEKGALTP-SRGQSFTSK 721
R CYN ++ K N S + + + + ++T SR +
Sbjct: 655 RRKHNCYNCGLLFCNACSSKKAVNASLAPNKSKLSRVCDSCFDHLWSITEFSRNVKMDNH 714
Query: 722 QSRN--VERKPGECLESASSLSSGLQRWGQVSCPIRFKTHCHEKSVEPTPIPKTQMSTHS 779
R V R+ E L S + +Q Q + + + S P+ ++ST S
Sbjct: 715 TPRMQMVTRRVSEDLTEKQS-ENEMQNLPQANRSSDGQPRWGQVS-GPSLFRFDKISTSS 772
Query: 780 PLLRKISLGSNFIPIASTVEKDLSESNKMLNEEVQRLRDQARNLEKQCQIGNQKVQECQQ 839
L +S +ST SESNK+L EE++RL+ +NL++QC++GN+K++ECQQ
Sbjct: 773 SLNLSVSARRT----SSTKISTSSESNKILTEEIERLKAVIKNLQRQCELGNEKMEECQQ 828
Query: 840 KIEEAWSLARXXXXXXXXXXXXXXXLAVRLHTLSEKISAAKEAKEGVDANLPPKLDTDKH 899
++++ W +A+ LA +L EK S K G+ N P ++
Sbjct: 829 ELDKTWEVAKEEAEKSKAAKEIIKALASKLQANKEKPS--NPLKTGIACN-PSQVSPIFD 885
Query: 900 PEVKLPKDRKVDSLCSSPIVFSNKLKSVYGRELCHDNSSGSVEDSK-VARTEPQQKGTKA 958
+ +P + + S + K V N V+ S + RT Q T+
Sbjct: 886 DSMSIPYLTPITTARSQHETKQHVEKCVTKSSNRDSNIKLLVDASPAITRTGYLQNETQD 945
Query: 959 SKLEYAEQYEPGIYITFTTLPSGQKGLKRVRFSRRRFTEKAAERWWEENQVVVYQKYGIE 1018
S E EQYEPG+YITFT LP GQK LKRVRFSR+RF+EK A+RWWEE QV+VY KY E
Sbjct: 946 SSAEQVEQYEPGVYITFTALPCGQKTLKRVRFSRKRFSEKEAQRWWEEKQVLVYNKYDAE 1005
>TAIR|locus:2079147 [details] [associations]
symbol:AT3G47660 "AT3G47660" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0008536
"Ran GTPase binding" evidence=ISS] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000306 Pfam:PF01363 SMART:SM00064
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002686 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0046872 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 IPI:IPI00548806 RefSeq:NP_190350.4 UniGene:At.48747
UniGene:At.66547 ProteinModelPortal:F4JCN3 SMR:F4JCN3 PRIDE:F4JCN3
EnsemblPlants:AT3G47660.1 GeneID:823920 KEGG:ath:AT3G47660
OMA:CLSHEIS ArrayExpress:F4JCN3 Uniprot:F4JCN3
Length = 954
Score = 1174 (418.3 bits), Expect = 8.1e-140, Sum P(2) = 8.1e-140
Identities = 232/518 (44%), Positives = 325/518 (62%)
Query: 199 SHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLES 258
S + + + GS + K + DV +WGE + G +GG + S S + D+ LPK+L+S
Sbjct: 237 SSAVSSSSQGSTFEDLKSLC-DVFVWGESIGDGLLGGGMHKSGSSSSLMTDSFLPKVLKS 295
Query: 259 AVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQS 318
V LD Q+IS G +A LVTK+G+++ WGE GRLGH V V PKL++ +G V+
Sbjct: 296 HVALDAQSISCGTNYAVLVTKQGQMYSWGEESGGRLGHGVCSYVPHPKLIDEFNGSTVEL 355
Query: 319 VSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGE 378
CGEF TCA+T SG++Y WG +H A L+G SHW P ++ ++G+ V ++CG
Sbjct: 356 ADCGEFHTCAVTASGDLYAWGDGDHNAGLLGLGSGASHWKPVRILGQMEGIYVKAISCGP 415
Query: 379 WHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVD 438
WHTA V++ G+LFT+GDGTFG LGHG+ + + P+EVE+L G + ACG WH+AA+V
Sbjct: 416 WHTAFVTSEGKLFTFGDGTFGALGHGDRISTNIPREVEALNGCRTIKAACGVWHSAAVVS 475
Query: 439 IMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVG 498
+ + S GKLFTWGD D GRLGH D E +L+P+CVT L F Q +CG+ +TV
Sbjct: 476 VFGEATSS----GKLFTWGDGDDGRLGHGDIECRLIPSCVTELDTTSFQQVACGQSITVA 531
Query: 499 LTGLGKVYTMGSAVHGQLGNPKAKD--RSITVVEGKLKEEFVKGISSGSYHVAVLTSGGS 556
L+ G+VY MG+A +P + D R+ + +EG L + FV+ ++ G +H+AVL S
Sbjct: 532 LSMSGQVYAMGTA------DP-SHDIVRAPSCIEGGLGKSFVQEVACGFHHIAVLNSKAE 584
Query: 557 VYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSS 616
VYTWGK +NGQLG GD++ R PT V+AL+ +QV VVCGS+ TA ICLHK I+ D +
Sbjct: 585 VYTWGKGSNGQLGHGDTEYRCMPTLVKALKGKQVRKVVCGSNYTATICLHKPITGTDSTK 644
Query: 617 CSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKIT 676
CS CR PF + RK HNCYNCG FC++C++KK + A++ P +P RVCD CY L+ I
Sbjct: 645 CSGCRHPFNYMRKLHNCYNCGSVFCNSCTSKKSLAAAMAPKTNRPYRVCDDCYIKLEGIR 704
Query: 677 HSGRLLKQENQSPRNLLNLQGSLSEEVKEEKGALTPSR 714
S L N + + +L S +E G +TP R
Sbjct: 705 ES--LATPANSARFSNASLPSSYE---MDEIG-ITPQR 736
Score = 215 (80.7 bits), Expect = 8.1e-140, Sum P(2) = 8.1e-140
Identities = 46/79 (58%), Positives = 59/79 (74%)
Query: 2 DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
DE +L+WY G+KEK+L+L+SVT+II GQRT F+ PQP ++ QSFS+IY GERSLDL
Sbjct: 49 DEIYLLWYCGKKEKRLKLSSVTRIIPGQRTAVFRRYPQPTKEYQSFSLIY--GERSLDL- 105
Query: 62 CKDKVQAESWFLGLRAAIS 80
DK +AE W LRA +S
Sbjct: 106 --DKDEAEFWLTTLRALLS 122
Score = 105 (42.0 bits), Expect = 5.2e-19, Sum P(2) = 5.2e-19
Identities = 92/428 (21%), Positives = 171/428 (39%)
Query: 464 LGHVDGERKLL--PTCVTRLVDFDFVQ-ASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK 520
+G D ++ P+C+ + FVQ +CG L +VYT G +GQLG+
Sbjct: 541 MGTADPSHDIVRAPSCIEGGLGKSFVQEVACGFHHIAVLNSKAEVYTWGKGSNGQLGHGD 600
Query: 521 AKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPT 580
+ R + + LK + V+ + GS + A + + G ++ G R
Sbjct: 601 TEYRCMPTLVKALKGKQVRKVVCGSNYTATICLHKPIT--GTDSTKCSGC-----RHPFN 653
Query: 581 FVEALRD-RQVESVVCGSSITAAICLHKSISVGDQSS---CSQCRMPF-GFRRKKHNCYN 635
++ L + SV C +S T+ L +++ C C + G R N
Sbjct: 654 YMRKLHNCYNCGSVFC-NSCTSKKSLAAAMAPKTNRPYRVCDDCYIKLEGIRESLATPAN 712
Query: 636 CGLHFCSAC--STKKIINASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLL 693
F +A S+ ++ +TP + + RV D+ ++ ++ H+ E
Sbjct: 713 SA-RFSNASLPSSYEMDEIGITPQR-QLLRV-DS-FDFFRQTKHADLKTIGETSGGSCTS 768
Query: 694 NLQGSLSEEVKEE---KGALTPSRGQSFTSKQSRNVERKPGECLESASSLSSGLQRWGQV 750
++ ++ ++K KG SR SF S Q +R C S S SS ++ V
Sbjct: 769 SIHSNM--DIKGSFNLKGIRRLSRLTSFDSVQEEGKQRTK-HCA-SKSDTSSLIRH--SV 822
Query: 751 SCPIRFKTHCHEKSVEPTPIPKTQMSTHSPLLRKISLGSNF---IPIASTVEKDLSESNK 807
+C + F SVE P+ S S + ++ S+F I +++ +SN+
Sbjct: 823 TCGLPFS---RRGSVELFPL-----SIKSSPVESVATTSDFTTDITDHELLQEVPKKSNQ 874
Query: 808 MLNEEVQRLRDQARNLEKQCQIGNQKVQECQQKIEEAWSLARXXXXXXXXXXXXXXXLAV 867
L+ E+ L+ Q L + + ++ + +K+E A +AR L +
Sbjct: 875 CLSHEISVLKAQVEELTLKSKKLETELGKTSKKLEVAVLMARDDAEKIKSSEEIVRSLTL 934
Query: 868 RLHTLSEK 875
+L ++K
Sbjct: 935 QLMNTTKK 942
>TAIR|locus:2163986 [details] [associations]
symbol:UVR8 "UVB-RESISTANCE 8" species:3702 "Arabidopsis
thaliana" [GO:0005737 "cytoplasm" evidence=ISM] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=ISS]
[GO:0009411 "response to UV" evidence=IMP] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0010224 "response to UV-B"
evidence=IEP;IGI] [GO:0000785 "chromatin" evidence=IDA] [GO:0009649
"entrainment of circadian clock" evidence=IMP] [GO:0006007 "glucose
catabolic process" evidence=RCA] [GO:0042803 "protein
homodimerization activity" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005829 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009649 GO:GO:0000785 EMBL:AB007646
GO:GO:0003682 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005085 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0010224 eggNOG:COG5184 UniGene:At.49214
EMBL:AF130441 EMBL:AY125497 EMBL:BT000600 IPI:IPI00521473
PIR:T50662 RefSeq:NP_201191.1 PDB:4D9S PDB:4DNU PDB:4DNV PDB:4DNW
PDBsum:4D9S PDBsum:4DNU PDBsum:4DNV PDBsum:4DNW
ProteinModelPortal:Q9FN03 SMR:Q9FN03 DIP:DIP-59667N STRING:Q9FN03
PRIDE:Q9FN03 EnsemblPlants:AT5G63860.1 GeneID:836506
KEGG:ath:AT5G63860 TAIR:At5g63860 HOGENOM:HOG000240817
InParanoid:Q9FN03 OMA:GTLWCWG PhylomeDB:Q9FN03
ProtClustDB:CLSN2686209 Genevestigator:Q9FN03 Uniprot:Q9FN03
Length = 440
Score = 467 (169.5 bits), Expect = 3.5e-45, Sum P(2) = 3.5e-45
Identities = 118/363 (32%), Positives = 184/363 (50%)
Query: 228 VLGGDI----GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEG-E 282
+L GDI G DG + + D P L + + +++ GA H ++ G E
Sbjct: 30 LLSGDIVCSWGRGEDGQLGHGDAE-DRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGME 88
Query: 283 VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN 342
V+ WG G GRLGH + D+ P ++ L GI ++ ++CG+ A+T GE+ +WG N
Sbjct: 89 VYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQ 148
Query: 343 HGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLG 402
+G +G+ + +P+K+ +G+R+ VA G HTA V+ G L+ +G G +G LG
Sbjct: 149 NGQLGLGD--TEDSLVPQKI-QAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLG 205
Query: 403 HGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKG 462
G+ + P+ V S G K+ VACG HT ++ + G L+T+G + G
Sbjct: 206 LGDRTDRLVPERVTSTGGEKMSMVACGWRHTISV-----------SYSGALYTYGWSKYG 254
Query: 463 RLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAK 522
+LGH D E L+P + L + Q S G T+ LT GK+Y G GQ+G
Sbjct: 255 QLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNL 314
Query: 523 DRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFV 582
D+ V ++ V +S G H +T +V+ WG+ NGQLG+G+S +R P +
Sbjct: 315 DQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKII 374
Query: 583 EAL 585
EAL
Sbjct: 375 EAL 377
Score = 465 (168.7 bits), Expect = 5.8e-45, Sum P(2) = 5.8e-45
Identities = 111/339 (32%), Positives = 175/339 (51%)
Query: 267 ISLGAKHAALVTKEGEVFC-WGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQ 325
IS GA H+ + G++ C WG G+DG+LGH D P + L G + SV+CG
Sbjct: 20 ISAGASHSVALLS-GDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADH 78
Query: 326 TCALTKSG-EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIV 384
T A ++SG E+Y+WG + G +G S + P + L G+R+ ++ACG+ H V
Sbjct: 79 TVAYSQSGMEVYSWGWGDFGR--LGHGNSSDLFTPLPI-KALHGIRIKQIACGDSHCLAV 135
Query: 385 STSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRC 444
+ G++ ++G G LG G+ ++ P+++++ G+++K VA G HTAA+ +
Sbjct: 136 TMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTE------ 189
Query: 445 KSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
G L+ WG G LG D +L+P VT +CG T+ ++ G
Sbjct: 190 -----DGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGA 244
Query: 505 VYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNA 564
+YT G + +GQLG+ +D I L F+ IS G H LTS G +Y WG N
Sbjct: 245 LYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNK 304
Query: 565 NGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
GQ+G+G++ ++ +P V D++V V CG T A+
Sbjct: 305 FGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAV 343
Score = 258 (95.9 bits), Expect = 6.5e-19, Sum P(2) = 6.5e-19
Identities = 65/234 (27%), Positives = 111/234 (47%)
Query: 370 RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACG 429
+V ++ G H+ + + + ++G G G LGHG+ ++ P ++ +L G ++ SV CG
Sbjct: 16 KVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCG 75
Query: 430 PWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQA 489
HT A + G ++++WG D GRLGH + P + L Q
Sbjct: 76 ADHTVAY----------SQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQI 125
Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVA 549
+CG + +T G+V + G +GQLG +D + + +K +++G+ H A
Sbjct: 126 ACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTA 185
Query: 550 VLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
+T G +Y WG G LGLGD +R P V + ++ V CG T ++
Sbjct: 186 AVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISV 239
Score = 139 (54.0 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 37/121 (30%), Positives = 58/121 (47%)
Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH-V 548
S G +V L V + G GQLG+ A+DR L + ++ G+ H V
Sbjct: 21 SAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTV 80
Query: 549 AVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKS 608
A SG VY+WG G+LG G+S + TP ++AL +++ + CG S A+ +
Sbjct: 81 AYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGE 140
Query: 609 I 609
+
Sbjct: 141 V 141
Score = 44 (20.5 bits), Expect = 3.5e-45, Sum P(2) = 3.5e-45
Identities = 18/62 (29%), Positives = 28/62 (45%)
Query: 693 LNLQGSLSEEVKEEKGALTPSRGQSFTSKQSRNVERKPGEC-LESASSLSSGLQRWGQVS 751
L++ G+ + + E + PS G+S+ S R P E L SS +G G +S
Sbjct: 377 LSVDGASGQHI--ESSNIDPSSGKSWVSPAERYAV-VPDETGLTDGSSKGNG----GDIS 429
Query: 752 CP 753
P
Sbjct: 430 VP 431
>ZFIN|ZDB-GENE-070718-6 [details] [associations]
symbol:herc2 "hect domain and RLD 2" species:7955
"Danio rerio" [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0006464 "cellular protein modification
process" evidence=IEA] [GO:0020037 "heme binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00632
InterPro:IPR000433 InterPro:IPR000569 InterPro:IPR001199
InterPro:IPR009060 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-070718-6
GO:GO:0046872 GO:GO:0008270 GO:GO:0020037 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
SUPFAM:SSF46934 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 InterPro:IPR006624 SMART:SM00706
EMBL:CABZ01006344 EMBL:CABZ01006345 EMBL:CABZ01006346 EMBL:FP085470
IPI:IPI00495163 Ensembl:ENSDART00000110770 Uniprot:E7EYK8
Length = 4832
Score = 477 (173.0 bits), Expect = 6.3e-38, Sum P(3) = 6.3e-38
Identities = 129/392 (32%), Positives = 197/392 (50%)
Query: 224 WGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEV 283
WG G +GG ++G+ + T +AL A + VQ I G + VT +G++
Sbjct: 3955 WGHNHRG-QLGG-IEGAKVKVPTPTEAL-------ATLRPVQLIG-GEQTLFAVTADGKL 4004
Query: 284 FCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGHN 341
+ G G GRLG VS P L+E + + ++ +V+ G AL+ GE+Y+WG
Sbjct: 4005 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGELYSWGEA 4064
Query: 342 NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVL 401
G G R PR + ++L GV V +A G H+A ++ SG+L+T+G G +G L
Sbjct: 4065 EDGKLGHGNRSPCDR--PR-VIESLRGVEVVDIAAGGAHSACITASGELYTWGKGRYGRL 4121
Query: 402 GHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADK 461
GHG+ ++ +PK VE+L+G +V VACG + C ++ +++WGD D
Sbjct: 4122 GHGDSEDQLKPKLVEALQGHRVIDVACGSGDAQTL-------CLTD--DDMVWSWGDGDY 4172
Query: 462 GRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA 521
G+LG + +P + L V+ CG +V LT G VYT G + +LG+
Sbjct: 4173 GKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD 4232
Query: 522 KD-RSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPT 580
R V+G L+ + V I++GS H T G VYTWG N GQLG G + + P
Sbjct: 4233 DHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPR 4291
Query: 581 FVEALRDRQVESVVCGSSITAAICLHKSISVG 612
V AL+ +++ V CGS+ T A K + G
Sbjct: 4292 LVAALQGKKINRVACGSAHTLAWSTSKPTNAG 4323
Score = 450 (163.5 bits), Expect = 3.0e-36, Sum P(2) = 3.0e-36
Identities = 122/386 (31%), Positives = 194/386 (50%)
Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
V +WG + D G + GS K +V P E+ L+V ++ G+K VT E
Sbjct: 2957 VFVWG--LNDKDQLGGLKGS----KIKV----PSFSETLSALNVVQVAGGSKSLFAVTAE 3006
Query: 281 GEVFCWGEGKDGRLGHKVNMD-VSCPKLVECLSGINVQSVSC--GEFQTCALTKSGEIYT 337
G+V+ GE +GRLG ++ + P+ + LS V+ V+ G ALT G++++
Sbjct: 3007 GKVYACGEATNGRLGLGLSSGTIPIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFS 3066
Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
WG + G +G SR + +L + L R+ +ACG H+A +++SG+L+++G G
Sbjct: 3067 WGEGDDGK--LGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGE 3123
Query: 398 FGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
+G LGHG+ +PK V+ L G +V VACG + + D G +F+WG
Sbjct: 3124 YGRLGHGDNTTQLRPKLVKVLLGHRVVQVACGSRDAQTLA--LTDE-------GMVFSWG 3174
Query: 458 DADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG 517
D D G+LG E +P + RL Q CG ++ LT G V+T G + +LG
Sbjct: 3175 DGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3234
Query: 518 N-PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQER 576
+ R +VEG L+ + + ++ G+ H +T G V+ WG N +GQ G G +
Sbjct: 3235 HGTDVHVRKPQMVEG-LRGKKIVHVAVGALHCLAVTETGQVFAWGDNDHGQQGNGTTTVN 3293
Query: 577 ETPTFVEALRDRQVESVVCGSSITAA 602
PT V+ L +++ V CGSS + A
Sbjct: 3294 RKPTLVQGLEGQKITRVACGSSHSVA 3319
Score = 407 (148.3 bits), Expect = 1.3e-31, Sum P(2) = 1.3e-31
Identities = 102/325 (31%), Positives = 164/325 (50%)
Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISL--GAKHAALVTKEGEVFCWGEGKD 291
G A +G + + +P+ + + V+ +++ G +HA +T +G+VF WGEG D
Sbjct: 3013 GEATNGRLGLGLSSGTIPIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDD 3072
Query: 292 GRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER 351
G+LGH M+ P+L+E L ++ ++CG + A+T SGE+Y+WG +G +G
Sbjct: 3073 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGR--LGHG 3130
Query: 352 RSRSHWLPRKLFDTLDGVRVSKVACG--EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV 409
+ + P KL L G RV +VACG + T ++ G +F++GDG FG LG G +
Sbjct: 3131 DNTTQLRP-KLVKVLLGHRVVQVACGSRDAQTLALTDEGMVFSWGDGDFGKLGRGGSEGC 3189
Query: 410 SQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDG 469
+ P+ +E L G V + CG + A+ KS G ++TWG D RLGH
Sbjct: 3190 NIPQNIERLNGQGVCQIECGAQFSLALT-------KS----GVVWTWGKGDYFRLGHGTD 3238
Query: 470 ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAK-DRSITV 528
P V L V + G + + +T G+V+ G HGQ GN +R T+
Sbjct: 3239 VHVRKPQMVEGLRGKKIVHVAVGALHCLAVTETGQVFAWGDNDHGQQGNGTTTVNRKPTL 3298
Query: 529 VEGKLKEEFVKGISSGSYHVAVLTS 553
V+G L+ + + ++ GS H T+
Sbjct: 3299 VQG-LEGQKITRVACGSSHSVAWTT 3322
Score = 383 (139.9 bits), Expect = 9.9e-28, Sum P(3) = 9.9e-28
Identities = 122/415 (29%), Positives = 182/415 (43%)
Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
G ++ WG G+LG V P E L+ + + GE A+T G++Y G+
Sbjct: 3950 GTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4009
Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC--GEWHTAIVSTSGQLFTYGDGTF 398
G +G S S P L +++ V + KVA G H +S+ G+L+++G+
Sbjct: 4010 GAGGRLGIGGTESVS--TPT-LLESIQHVFIRKVAVNSGGKHCLALSSEGELYSWGEAED 4066
Query: 399 GVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
G LGHGN +P+ +ESLRG++V +A G H+A I G+L+TWG
Sbjct: 4067 GKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACIT-----------ASGELYTWGK 4115
Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAVHGQL 516
GRLGH D E +L P V L + +CG T+ LT V++ G +G+L
Sbjct: 4116 GRYGRLGHGDSEDQLKPKLVEALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKL 4175
Query: 517 GNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQER 576
G + + + L V + GS LT G+VYTWGK +LG G
Sbjct: 4176 GRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV 4235
Query: 577 ETPTFVEALRDRQVESVVCGSSITAAICLHKS------------ISVGDQSSCSQCRMPF 624
P V+ L+ ++V ++ GS + C + G ++ + R+
Sbjct: 4236 RRPRQVQGLQGKKVIAIATGS-LHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVA 4294
Query: 625 GFRRKKHNCYNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKITHSG 679
+ KK N CG A ST K NA P + P YNHLQ+I G
Sbjct: 4295 ALQGKKINRVACGSAHTLAWSTSKPTNAGKLPAQ-VPME-----YNHLQEIAIIG 4343
Score = 376 (137.4 bits), Expect = 2.8e-28, Sum P(2) = 2.8e-28
Identities = 103/332 (31%), Positives = 160/332 (48%)
Query: 270 GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCAL 329
G + AA + + VF WG +LG + P E LS +NV V+ G A+
Sbjct: 2946 GLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAV 3003
Query: 330 TKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC--GEWHTAIVSTS 387
T G++Y G +G +G S + +PR++ L V KVA G H ++
Sbjct: 3004 TAEGKVYACGEATNGRLGLG-LSSGTIPIPRQI-SALSNYVVKKVAVHSGGRHAMALTVD 3061
Query: 388 GQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSN 447
G++F++G+G G LGH + N +P+ +E+L+ +++ +ACG H+AAI
Sbjct: 3062 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITS--------- 3112
Query: 448 AIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRM--LTVGLTGLGKV 505
G+L++WG + GRLGH D +L P V L+ VQ +CG T+ LT G V
Sbjct: 3113 --SGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHRVVQVACGSRDAQTLALTDEGMV 3170
Query: 506 YTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
++ G G+LG ++ +I +L + V I G+ LT G V+TWGK
Sbjct: 3171 FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 3230
Query: 566 GQLGLGDSQERETPTFVEALRDRQVESVVCGS 597
+LG G P VE LR +++ V G+
Sbjct: 3231 FRLGHGTDVHVRKPQMVEGLRGKKIVHVAVGA 3262
Score = 333 (122.3 bits), Expect = 8.6e-23, Sum P(3) = 8.6e-23
Identities = 94/330 (28%), Positives = 157/330 (47%)
Query: 305 PKLVECLSGINVQSVSC---GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRK 361
P LV L+ + ++ G+ AL+ +GE+++WG + G G+
Sbjct: 474 PMLVHALTSRKIMKLAAHPDGQHYL-ALSVNGEVFSWGCGDGGRLGHGDTTYLEEPTMIS 532
Query: 362 LFDTLD-GVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRG 420
+F G +V +ACG ++A ++ G+L T+G G +G LGHG+ ++ + P V +L+G
Sbjct: 533 VFSGRPVGKQVVHIACGSTYSAAITADGELHTWGRGNYGRLGHGSSEDQTTPMLVTALKG 592
Query: 421 LKVKSVACGPW--HTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCV 478
LKV VACG T A+ + G++++WGD D G+LG + P V
Sbjct: 593 LKVIDVACGSGDAQTLAVTE-----------NGQVWSWGDGDYGKLGRGGSDGCKTPKLV 641
Query: 479 TRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFV 538
+L D D V+ CG +V LT G+VYT G + +LG+ + + L+ + V
Sbjct: 642 EKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRYPKLLDSLQGKRV 701
Query: 539 KGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDS--QERETPTFVEALRDRQVESVVCG 596
I+ GS H LT G V++WG +N +L D+ ++ P + L + + + CG
Sbjct: 702 VDIAVGSTHCLALTEEGEVHSWG--SNDKLQHFDTLFSNKKQPKALPGLNSKHIVGISCG 759
Query: 597 --SSITAAICLHKSISVGDQSSCSQCRMPF 624
S + + C S+ + C M F
Sbjct: 760 PGQSFSWSSCSEWSVGLRVPFVVDVCTMTF 789
Score = 326 (119.8 bits), Expect = 4.8e-22, Sum P(3) = 4.8e-22
Identities = 87/277 (31%), Positives = 140/277 (50%)
Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
+V WG G GG +G D + + T + + + V+ +I+ G+ ++A +T
Sbjct: 505 EVFSWGCGD-GGRLGHG-DTTYLEEPTMISVFSGRPVGKQVV----HIACGSTYSAAITA 558
Query: 280 EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCG--EFQTCALTKSGEIYT 337
+GE+ WG G GRLGH + D + P LV L G+ V V+CG + QT A+T++G++++
Sbjct: 559 DGELHTWGRGNYGRLGHGSSEDQTTPMLVTALKGLKVIDVACGSGDAQTLAVTENGQVWS 618
Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
WG ++G +G S P KL + L + + KV CG + ++ GQ++T+G G
Sbjct: 619 WGDGDYGK--LGRGGSDGCKTP-KLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGD 675
Query: 398 FGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
LGHG ++V PK ++SL+G +V +A G H A+ + G++ +WG
Sbjct: 676 NQRLGHGTDEHVRYPKLLDSLQGKRVVDIAVGSTHCLALTE-----------EGEVHSWG 724
Query: 458 DADKGRLGHVDG--ERKLLPTCVTRLVDFDFVQASCG 492
DK L H D K P + L V SCG
Sbjct: 725 SNDK--LQHFDTLFSNKKQPKALPGLNSKHIVGISCG 759
Score = 326 (119.8 bits), Expect = 4.8e-22, Sum P(3) = 4.8e-22
Identities = 85/282 (30%), Positives = 130/282 (46%)
Query: 237 VDGSVSQNKTQVDALLPKLLESAVMLDVQNISL--GAKHAALVTKEGEVFCWGEGKDGRL 294
+ G+V + L P L+ + + ++ +H ++ GEVF WG G GRL
Sbjct: 458 ITGAVYTQNYKSTTLAPMLVHALTSRKIMKLAAHPDGQHYLALSVNGEVFSWGCGDGGRL 517
Query: 295 GHKVNMDVSCPKLVECLSGI----NVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGE 350
GH + P ++ SG V ++CG + A+T GE++TWG N+G +G
Sbjct: 518 GHGDTTYLEEPTMISVFSGRPVGKQVVHIACGSTYSAAITADGELHTWGRGNYGR--LGH 575
Query: 351 RRSRSHWLPRKLFDTLDGVRVSKVACG--EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN 408
S P L L G++V VACG + T V+ +GQ++++GDG +G LG G
Sbjct: 576 GSSEDQTTPM-LVTALKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDG 634
Query: 409 VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD 468
PK VE L+ L + V CG + A+ G+++TWG D RLGH
Sbjct: 635 CKTPKLVEKLQDLDIVKVCCGSQFSVALTK-----------DGQVYTWGKGDNQRLGHGT 683
Query: 469 GERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
E P + L V + G + LT G+V++ GS
Sbjct: 684 DEHVRYPKLLDSLQGKRVVDIAVGSTHCLALTEEGEVHSWGS 725
Score = 268 (99.4 bits), Expect = 2.4e-21, Sum P(3) = 2.4e-21
Identities = 78/274 (28%), Positives = 131/274 (47%)
Query: 332 SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
SG IY WGHN+ G L G ++ +P + L +R ++ GE V+ G+L+
Sbjct: 3949 SGTIYGWGHNHRG-QLGGIEGAKVK-VPTPT-EALATLRPVQLIGGEQTLFAVTADGKLY 4005
Query: 392 TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
G G G LG G ++VS P +ES++ + ++ VA V+ C + + G
Sbjct: 4006 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVA---------VNSGGKHCLALSSEG 4056
Query: 452 KLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
+L++WG+A+ G+LGH + P + L + V + G + +T G++YT G
Sbjct: 4057 ELYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELYTWGKG 4116
Query: 512 VHGQLGNPKAKDR-SITVVEGKLKEEFVK-GISSGSYHVAVLTSGGSVYTWGKNANGQLG 569
+G+LG+ ++D+ +VE + SG LT V++WG G+LG
Sbjct: 4117 RYGRLGHGDSEDQLKPKLVEALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLG 4176
Query: 570 LGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
G S + P +++L V V CGS + A+
Sbjct: 4177 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4210
Score = 240 (89.5 bits), Expect = 5.7e-13, Sum P(3) = 5.7e-13
Identities = 68/209 (32%), Positives = 105/209 (50%)
Query: 224 WGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEV 283
WG G G +G GS S+++T +L L+ ++DV S A+ A VT+ G+V
Sbjct: 565 WGRGNYGR-LG---HGS-SEDQTT--PMLVTALKGLKVIDVACGSGDAQTLA-VTENGQV 616
Query: 284 FCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNH 343
+ WG+G G+LG + PKLVE L +++ V CG + ALTK G++YTWG ++
Sbjct: 617 WSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDN 676
Query: 344 GADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGH 403
+G P KL D+L G RV +A G H ++ G++ ++G L H
Sbjct: 677 --QRLGHGTDEHVRYP-KLLDSLQGKRVVDIAVGSTHCLALTEEGEVHSWGSND--KLQH 731
Query: 404 GN--LQNVSQPKEVESLRGLKVKSVACGP 430
+ N QPK + L + ++CGP
Sbjct: 732 FDTLFSNKKQPKALPGLNSKHIVGISCGP 760
Score = 235 (87.8 bits), Expect = 4.9e-12, Sum P(3) = 4.9e-12
Identities = 60/190 (31%), Positives = 93/190 (48%)
Query: 198 ESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLE 257
+ HR++ GS + + D M+W G GD G G K +P ++
Sbjct: 4139 QGHRVIDVACGSGDAQTLCLTDDDMVWSWG--DGDYGKLGRGGSDGCK------VPMKID 4190
Query: 258 SAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQ 317
S L V + G++ + +TK G V+ WG+G RLGH + V P+ V+ L G V
Sbjct: 4191 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4250
Query: 318 SVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
+++ G T+ GE+YTWG N+ G +G+ + + PR L L G ++++VACG
Sbjct: 4251 AIATGSLHCVCCTEDGEVYTWGDNDEGQ--LGDGTTNAIQRPR-LVAALQGKKINRVACG 4307
Query: 378 EWHTAIVSTS 387
HT STS
Sbjct: 4308 SAHTLAWSTS 4317
Score = 234 (87.4 bits), Expect = 2.4e-12, Sum P(3) = 2.4e-12
Identities = 90/320 (28%), Positives = 149/320 (46%)
Query: 292 GRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER 351
G LG K +V+ P + LS + V + C E LT +G +YT N+
Sbjct: 419 GLLGWKPYANVNGPIQCKALSNLGVTQIVCSEKGFLILTITGAVYT---QNY-------- 467
Query: 352 RSRSHWLPRKLFDTLDGVRVSKVAC---GEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN 408
+S L L L ++ K+A G+ + A+ S +G++F++G G G LGHG+
Sbjct: 468 --KSTTLAPMLVHALTSRKIMKLAAHPDGQHYLAL-SVNGEVFSWGCGDGGRLGHGDTTY 524
Query: 409 VSQPKEVE--SLR--GLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRL 464
+ +P + S R G +V +ACG ++AAI D + + G +G G
Sbjct: 525 LEEPTMISVFSGRPVGKQVVHIACGSTYSAAIT---ADG-ELHTWGRG--NYGRLGHG-- 576
Query: 465 GHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD- 523
D +L T + L D V G T+ +T G+V++ G +G+LG +
Sbjct: 577 SSEDQTTPMLVTALKGLKVID-VACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGC 635
Query: 524 RSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVE 583
++ +VE KL++ + + GS LT G VYTWGK N +LG G + P ++
Sbjct: 636 KTPKLVE-KLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRYPKLLD 694
Query: 584 ALRDRQVESVVCGSSITAAI 603
+L+ ++V + GS+ A+
Sbjct: 695 SLQGKRVVDIAVGSTHCLAL 714
Score = 223 (83.6 bits), Expect = 1.4e-16, Sum P(3) = 1.4e-16
Identities = 74/232 (31%), Positives = 106/232 (45%)
Query: 378 EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
+W T SG ++ +G G LG V P E+L L+ + G A+
Sbjct: 3941 DW-TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVT 3999
Query: 438 DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRL--VDFDFVQASCGRML 495
D GKL+ G GRLG E PT + + V V + G
Sbjct: 4000 ---AD--------GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKH 4048
Query: 496 TVGLTGLGKVYTMGSAVHGQLG--NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTS 553
+ L+ G++Y+ G A G+LG N DR V+E L+ V I++G H A +T+
Sbjct: 4049 CLALSSEGELYSWGEAEDGKLGHGNRSPCDRP-RVIES-LRGVEVVDIAAGGAHSACITA 4106
Query: 554 GGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
G +YTWGK G+LG GDS+++ P VEAL+ +V V CGS +CL
Sbjct: 4107 SGELYTWGKGRYGRLGHGDSEDQLKPKLVEALQGHRVIDVACGSGDAQTLCL 4158
Score = 195 (73.7 bits), Expect = 1.2e-13, Sum P(3) = 1.2e-13
Identities = 118/470 (25%), Positives = 195/470 (41%)
Query: 365 TLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVK 424
T G K G A + T ++F +G LG + P E+L L V
Sbjct: 2934 TATGSMSRKRLSGLESAATIRT--KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVV 2991
Query: 425 SVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG-HVDGERKLLPTCVTRLVD 483
VA G + ++ + + GK++ G+A GRLG + +P ++ L +
Sbjct: 2992 QVAGG---SKSLFAVTAE--------GKVYACGEATNGRLGLGLSSGTIPIPRQISALSN 3040
Query: 484 FDF--VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKG 540
+ V G + LT GKV++ G G+LG+ + ++E LK + ++
Sbjct: 3041 YVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEA-LKTKRIRD 3099
Query: 541 ISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSIT 600
I+ GS H A +TS G +Y+WG G+LG GD+ + P V+ L +V V CGS
Sbjct: 3100 IACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHRVVQVACGSRDA 3159
Query: 601 AAICLHKS---ISVGD-------QSSCSQCRMPFGFRRKKHN--CY-NCGLHFCSACSTK 647
+ L S GD + C +P R C CG F A +
Sbjct: 3160 QTLALTDEGMVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKS 3219
Query: 648 KIINASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQ-GSLSEEVKEE 706
++ T KG R+ H++K +++ E + ++++ G+L E
Sbjct: 3220 GVV---WTWGKGDYFRLGHGTDVHVRK----PQMV--EGLRGKKIVHVAVGALHCLAVTE 3270
Query: 707 KGALTPSRGQSFTSKQSRN---VERKPGECLESASSLSSGL--QRWGQVSCPIRFKTHCH 761
G + + G + +Q V RKP +L GL Q+ +V+C +H
Sbjct: 3271 TGQVF-AWGDNDHGQQGNGTTTVNRKP--------TLVQGLEGQKITRVACG---SSH-- 3316
Query: 762 EKSVEPTPIPKTQMSTHSPLL---RKISLGSNFIPIASTVEKDLSESNKM 808
SV T + T S H P+L + SLG++++ + S + L SNK+
Sbjct: 3317 --SVAWTTVDVTTPSVHEPVLFQTARDSLGASYLGVPSDSDPSLL-SNKL 3363
Score = 99 (39.9 bits), Expect = 2.4e-21, Sum P(3) = 2.4e-21
Identities = 28/85 (32%), Positives = 45/85 (52%)
Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
PKLL+S V +I++G+ H +T+EGEV WG + +L H + S K + L
Sbjct: 690 PKLLDSLQGKRVVDIAVGSTHCLALTEEGEVHSWGS--NDKLQHFDTL-FSNKKQPKALP 746
Query: 313 GIN---VQSVSCGEFQTCALTKSGE 334
G+N + +SCG Q+ + + E
Sbjct: 747 GLNSKHIVGISCGPGQSFSWSSCSE 771
Score = 46 (21.3 bits), Expect = 8.6e-23, Sum P(3) = 8.6e-23
Identities = 19/79 (24%), Positives = 32/79 (40%)
Query: 617 CSQCRMPFGFRRKKHNCYNCG-LHFCSAC-STKKIINASLTPNKGKPSRVCDTCYNHLQK 674
C C+M F + C +C FC +C T+K +P + ++
Sbjct: 2704 CDGCQM-FPINGPRFKCRSCDDFDFCESCFKTRKHNPRHSFGRINEPGQ--SPTFSG--- 2757
Query: 675 ITHSGRLLKQENQSPRNLL 693
SG+ LK+ + S R +L
Sbjct: 2758 --RSGKQLKRHHSSQRGML 2774
Score = 45 (20.9 bits), Expect = 6.3e-38, Sum P(3) = 6.3e-38
Identities = 32/132 (24%), Positives = 56/132 (42%)
Query: 801 DLSESNKMLNEEVQRLRDQARNLEK--QCQIGNQKVQECQQKIEEAWSLARXXXXXXXXX 858
DLSE +K + +RD + E+ + C Q+++ L+
Sbjct: 4569 DLSEVDKDFIPGLMYIRDNEASAEEFEAMPLPFTVPSACGQEVQ----LSSKHSHISLEN 4624
Query: 859 XXXXXXLAV--RLHTLSEKISAAKEAKEGVDANLPPKLDTDKHPEVKLPKDRKVDSL-CS 915
LA+ RLH E++SA +E G+ A + P P + L +++++ C
Sbjct: 4625 RSEYVRLAINYRLHEFDEQVSAVRE---GM-ARVVPV------PLLSLFTGYELETMVCG 4674
Query: 916 SPIVFSNKLKSV 927
SP + + LKSV
Sbjct: 4675 SPDIPLHLLKSV 4686
Score = 44 (20.5 bits), Expect = 1.4e-22, Sum P(3) = 1.4e-22
Identities = 17/72 (23%), Positives = 31/72 (43%)
Query: 638 LHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQG 697
LH C K +IN + + K S L + S + + ++ + R + N Q
Sbjct: 971 LHRCRTTLDKDLINTGIYESANKQSLPLVQLVQQLLRNIASQTIARLKDVA-RRISNCQD 1029
Query: 698 SLSEEVKEEKGA 709
+ E+V +E+ A
Sbjct: 1030 T--EQVSKERSA 1039
Score = 44 (20.5 bits), Expect = 1.8e-22, Sum P(3) = 1.8e-22
Identities = 18/87 (20%), Positives = 41/87 (47%)
Query: 765 VEPTPIPKTQMSTHS-------PLLRKISLGSNFIPIASTVEKDLSESNKMLNEEVQRLR 817
+ P P+ K Q + S PLL I + + +V+ S+S+ M L+
Sbjct: 1579 LSPAPVDKKQTTVKSAKQDKWQPLLNTIGSVQKYRWLRHSVQGSFSQSSLMSTIVEFSLK 1638
Query: 818 DQARNLEK--QCQIGNQKVQECQQKIE 842
++ ++EK +C + ++++ + ++E
Sbjct: 1639 EEPLDVEKIRKCLL--KQLERAEVRLE 1663
Score = 42 (19.8 bits), Expect = 6.3e-38, Sum P(3) = 6.3e-38
Identities = 10/26 (38%), Positives = 13/26 (50%)
Query: 11 GQKEKQLRLNSVTKIIMGQRTVNFQC 36
G QLR V K+++G R V C
Sbjct: 3130 GDNTTQLRPKLV-KVLLGHRVVQVAC 3154
>UNIPROTKB|D4ACN3 [details] [associations]
symbol:Herc2 "Protein Herc2" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
RGD:1307989 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005743 GO:GO:0046872 GO:GO:0008270 GO:GO:0006281
GO:GO:0007283 GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.10.120.10 SUPFAM:SSF55856
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256
PROSITE:PS51284 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 OrthoDB:EOG41C6V9 InterPro:IPR006624
SMART:SM00706 IPI:IPI00764717 Ensembl:ENSRNOT00000019245
ArrayExpress:D4ACN3 Uniprot:D4ACN3
Length = 4779
Score = 470 (170.5 bits), Expect = 1.7e-37, Sum P(3) = 1.7e-37
Identities = 129/392 (32%), Positives = 195/392 (49%)
Query: 224 WGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEV 283
WG G +GG ++G+ + T +AL A + VQ I G + VT +G++
Sbjct: 3902 WGHNHRG-QLGG-IEGAKVKVPTPCEAL-------ATLRPVQLIG-GEQTLFAVTADGKL 3951
Query: 284 FCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGHN 341
+ G G GRLG VS P L+E + + ++ +V+ G AL+ GE+Y+WG
Sbjct: 3952 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEA 4011
Query: 342 NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVL 401
G G R PR + ++L G+ V VA G H+A V+ +G L+T+G G +G L
Sbjct: 4012 EDGKLGHGNRSPCDR--PR-VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4068
Query: 402 GHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADK 461
GH + ++ +PK VE+L+G +V +ACG + C ++ +++WGD D
Sbjct: 4069 GHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTL-------CLTD--DDTVWSWGDGDY 4119
Query: 462 GRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA 521
G+LG + +P + L V+ CG +V LT G VYT G + +LG+
Sbjct: 4120 GKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD 4179
Query: 522 KD-RSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPT 580
R V+G L+ + V I++GS H T G VYTWG N GQLG G + + P
Sbjct: 4180 DHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPR 4238
Query: 581 FVEALRDRQVESVVCGSSITAAICLHKSISVG 612
V AL+ ++V V CGS+ T A K S G
Sbjct: 4239 LVAALQGKKVNRVACGSAHTLAWSTSKPASAG 4270
Score = 457 (165.9 bits), Expect = 4.1e-35, Sum P(4) = 4.1e-35
Identities = 117/355 (32%), Positives = 182/355 (51%)
Query: 252 LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMD-VSCPKLVEC 310
+P E+ L+V ++ G+K VT EG+V+ GE +GRLG ++ V P+ +
Sbjct: 2926 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITA 2985
Query: 311 LSGINVQSVSC--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
LS V+ V+ G ALT G++++WG + G +G SR + +L + L
Sbjct: 2986 LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK--LGHF-SRMNCDKPRLIEALKT 3042
Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
R+ +ACG H+A +++SG+L+T+G G +G LGHG+ +PK V+ L G +V VAC
Sbjct: 3043 KRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 3102
Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ 488
G + + D G +F+WGD D G+LG E +P + RL Q
Sbjct: 3103 GSRDAQTLA--LTDE-------GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQ 3153
Query: 489 ASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK-AKDRSITVVEGKLKEEFVKGISSGSYH 547
CG ++ LT G V+T G + +LG+ R VVEG L+ + + ++ G+ H
Sbjct: 3154 IECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALH 3212
Query: 548 VAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
+T G VY WG N +GQ G G + PT V+ L +++ V CGSS + A
Sbjct: 3213 CLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3267
Score = 388 (141.6 bits), Expect = 1.3e-27, Sum P(4) = 1.3e-27
Identities = 108/344 (31%), Positives = 166/344 (48%)
Query: 253 PKLLESAVMLDVQNISL--GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVEC 310
P LLES + ++ +++ G KH ++ EGEV+ WGE +DG+LGH P+++E
Sbjct: 3973 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4032
Query: 311 LSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR 370
L GI V V+ G + +T +G++YTWG +G +G S P KL + L G R
Sbjct: 4033 LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR--LGHSDSEDQLKP-KLVEALQGHR 4089
Query: 371 VSKVACG--EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
V +ACG + T ++ ++++GDG +G LG G P +++SL GL V V C
Sbjct: 4090 VIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC 4149
Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ 488
G + A+ KS A+ +TWG D RLGH + P V L +
Sbjct: 4150 GSQFSVALT-------KSGAV----YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIA 4198
Query: 489 ASCGRMLTVGLTGLGKVYTMGSAVHGQLG----NPKAKDRSITVVEGKLKEEFVKGISSG 544
+ G + V T G+VYT G GQLG N + R + ++GK V ++ G
Sbjct: 4199 IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKK----VNRVACG 4254
Query: 545 SYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDR 588
S H ++ GK Q+ + + +E P + ALR+R
Sbjct: 4255 SAHTLAWSTSKPASA-GK-LPAQVPMEYNHLQEIP--IIALRNR 4294
Score = 375 (137.1 bits), Expect = 3.2e-26, Sum P(4) = 3.2e-26
Identities = 99/320 (30%), Positives = 156/320 (48%)
Query: 282 EVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
+VF WG +LG + P E LS +NV V+ G A+T G++Y+ G
Sbjct: 2904 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEA 2963
Query: 342 NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC--GEWHTAIVSTSGQLFTYGDGTFG 399
+G +G S + +PR++ L V KVA G H ++ G++F++G+G G
Sbjct: 2964 TNGRLGLG-MSSGTVPIPRQI-TALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDG 3021
Query: 400 VLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
LGH + N +P+ +E+L+ +++ +ACG H+AA+ G+L+TWG
Sbjct: 3022 KLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTS-----------SGELYTWGLG 3070
Query: 460 DKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRM--LTVGLTGLGKVYTMGSAVHGQLG 517
+ GRLGH D +L P V L+ +Q +CG T+ LT G V++ G G+LG
Sbjct: 3071 EYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG 3130
Query: 518 NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERE 577
++ +I +L + V I G+ LT G V+TWGK +LG G
Sbjct: 3131 RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVR 3190
Query: 578 TPTFVEALRDRQVESVVCGS 597
P VE LR +++ V G+
Sbjct: 3191 KPQVVEGLRGKKIVHVAVGA 3210
Score = 374 (136.7 bits), Expect = 4.2e-26, Sum P(4) = 4.2e-26
Identities = 121/411 (29%), Positives = 182/411 (44%)
Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
G ++ WG G+LG V P E L+ + + GE A+T G++Y G+
Sbjct: 3897 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 3956
Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC--GEWHTAIVSTSGQLFTYGDGTF 398
G +G S S P L +++ V + KVA G H +S+ G+++++G+
Sbjct: 3957 GAGGRLGIGGTESVS--TPT-LLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4013
Query: 399 GVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
G LGHGN +P+ +ESLRG++V VA G H+A C + A G L+TWG
Sbjct: 4014 GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSA---------CVTAA--GDLYTWGK 4062
Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAVHGQL 516
GRLGH D E +L P V L + +CG T+ LT V++ G +G+L
Sbjct: 4063 GRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKL 4122
Query: 517 GNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQER 576
G + + + L V + GS LT G+VYTWGK +LG G
Sbjct: 4123 GRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV 4182
Query: 577 ETPTFVEALRDRQVESVVCGSSITAAICLHKS------------ISVGDQSSCSQCRMPF 624
P V+ L+ ++V ++ GS + C + G ++ + R+
Sbjct: 4183 RRPRQVQGLQGKKVIAIATGS-LHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVA 4241
Query: 625 GFRRKKHNCYNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKI 675
+ KK N CG A ST K +A P + P YNHLQ+I
Sbjct: 4242 ALQGKKVNRVACGSAHTLAWSTSKPASAGKLPAQ-VPME-----YNHLQEI 4286
Score = 349 (127.9 bits), Expect = 2.0e-23, Sum P(4) = 2.0e-23
Identities = 101/378 (26%), Positives = 175/378 (46%)
Query: 245 KTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC 304
K + + P E L V ++ K ++++ G V+ N D+
Sbjct: 380 KYYANVIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYT----------QAYNSDMLA 429
Query: 305 PKLVECLSGINVQSVSCGE--FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL 362
P+LV+ L+ N+ ++ AL +GE+Y+WG + G +G + P K+
Sbjct: 430 PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGR--LGHGDTVPLEEP-KV 486
Query: 363 FDTLDGVRVSK----VACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESL 418
G + K +ACG ++A ++ G+L+T+G G +G LGHG+ ++ + P V L
Sbjct: 487 ISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL 546
Query: 419 RGLKVKSVACGPW--HTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPT 476
+GLKV VACG T A+ + G++++WGD D G+LG + P
Sbjct: 547 KGLKVIDVACGSGDAQTLAVTE-----------NGQVWSWGDGDYGKLGRGGSDGCKTPK 595
Query: 477 CVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD-RSITVVEGKLKE 535
+ +L D D ++ CG ++ LT G+VY+ G + +LG+ + R ++EG L+
Sbjct: 596 LIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG-LQG 654
Query: 536 EFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVC 595
+ V +++GS H LT V++WG N Q + PT + L + + + C
Sbjct: 655 KKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPTALPGLDTKHIVGIAC 714
Query: 596 G--SSITAAICLHKSISV 611
G S + C SI +
Sbjct: 715 GPAQSFAWSSCSEWSIGL 732
Score = 271 (100.5 bits), Expect = 3.4e-15, Sum P(4) = 3.4e-15
Identities = 79/274 (28%), Positives = 133/274 (48%)
Query: 332 SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
SG IY WGHN+ G L G ++ +P + L +R ++ GE V+ G+L+
Sbjct: 3896 SGTIYGWGHNHRG-QLGGIEGAKVK-VPTPC-EALATLRPVQLIGGEQTLFAVTADGKLY 3952
Query: 392 TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
G G G LG G ++VS P +ES++ + +K VA V+ C + + G
Sbjct: 3953 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVA---------VNSGGKHCLALSSEG 4003
Query: 452 KLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
++++WG+A+ G+LGH + P + L + V + G + +T G +YT G
Sbjct: 4004 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4063
Query: 512 VHGQLGNPKAKDRSITVVEGKLKEEFVKGIS--SGSYHVAVLTSGGSVYTWGKNANGQLG 569
+G+LG+ ++D+ + L+ V I+ SG LT +V++WG G+LG
Sbjct: 4064 RYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4123
Query: 570 LGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
G S + P +++L V V CGS + A+
Sbjct: 4124 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4157
Score = 242 (90.2 bits), Expect = 3.5e-12, Sum P(4) = 3.5e-12
Identities = 86/332 (25%), Positives = 155/332 (46%)
Query: 292 GRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER 351
G +G K +V P E L+ + V V+C E + L+++G +YT +N+ D++ +
Sbjct: 375 GLIGWKYYANVIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNS---DMLAPQ 431
Query: 352 RSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQ 411
+ R + V+++ + G + A+ +T G+++++G G G LGHG+ + +
Sbjct: 432 LVQG-LASRNI------VKIAAHSDGHHYLALAAT-GEVYSWGCGDGGRLGHGDTVPLEE 483
Query: 412 PKEVESLRGLK----VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHV 467
PK + + G + V +ACG ++AAI G+L D+ V
Sbjct: 484 PKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 543
Query: 468 DGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD-RSI 526
G + L +++D V G T+ +T G+V++ G +G+LG + ++
Sbjct: 544 AGLKGL------KVID---VACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTP 594
Query: 527 TVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALR 586
++E KL++ V + GS LT G VY+WGK N +LG G + P +E L+
Sbjct: 595 KLIE-KLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQ 653
Query: 587 DRQVESVVCGSSITAAICLHKSI-SVGDQSSC 617
++V V GS+ A+ + S G C
Sbjct: 654 GKKVIDVAAGSTHCLALTEDSEVHSWGSNDQC 685
Score = 229 (85.7 bits), Expect = 9.9e-12, Sum P(3) = 9.9e-12
Identities = 60/190 (31%), Positives = 92/190 (48%)
Query: 198 ESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLE 257
+ HR++ GS + + D +W G GD G G K +P ++
Sbjct: 4086 QGHRVIDIACGSGDAQTLCLTDDDTVWSWG--DGDYGKLGRGGSDGCK------VPMKID 4137
Query: 258 SAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQ 317
S L V + G++ + +TK G V+ WG+G RLGH + V P+ V+ L G V
Sbjct: 4138 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4197
Query: 318 SVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
+++ G T+ GE+YTWG N+ G +G+ + + PR L L G +V++VACG
Sbjct: 4198 AIATGSLHCVCCTEDGEVYTWGDNDEGQ--LGDGTTNAIQRPR-LVAALQGKKVNRVACG 4254
Query: 378 EWHTAIVSTS 387
HT STS
Sbjct: 4255 SAHTLAWSTS 4264
Score = 216 (81.1 bits), Expect = 2.5e-26, Sum P(4) = 2.5e-26
Identities = 72/232 (31%), Positives = 105/232 (45%)
Query: 378 EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
+W T SG ++ +G G LG V P E+L L+ + G A+
Sbjct: 3888 DW-TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 3946
Query: 438 DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRL--VDFDFVQASCGRML 495
D GKL+ G GRLG E PT + + V V + G
Sbjct: 3947 ---AD--------GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKH 3995
Query: 496 TVGLTGLGKVYTMGSAVHGQLG--NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTS 553
+ L+ G+VY+ G A G+LG N DR V+E L+ V +++G H A +T+
Sbjct: 3996 CLALSSEGEVYSWGEAEDGKLGHGNRSPCDRP-RVIES-LRGIEVVDVAAGGAHSACVTA 4053
Query: 554 GGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
G +YTWGK G+LG DS+++ P VEAL+ +V + CGS +CL
Sbjct: 4054 AGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCL 4105
Score = 211 (79.3 bits), Expect = 5.3e-09, Sum P(4) = 5.3e-09
Identities = 63/212 (29%), Positives = 100/212 (47%)
Query: 249 DALLPKLLESAVMLDVQNISLGAKHAAL--VTKEGEVFCWGEGKDGRLGHKVNMDVSCPK 306
D +P L+ L V +++ G+ A VT+ G+V+ WG+G G+LG + PK
Sbjct: 536 DEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPK 595
Query: 307 LVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTL 366
L+E L ++V V CG + ALTK G++Y+WG ++ +G + H KL + L
Sbjct: 596 LIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDN--QRLGHG-TEEHVRYPKLLEGL 652
Query: 367 DGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVK-- 424
G +V VA G H ++ ++ ++G H + V++P E +L GL K
Sbjct: 653 QGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHFDTLRVTKP-EPTALPGLDTKHI 709
Query: 425 -SVACGP-----------WHTAAIVDIMVDRC 444
+ACGP W V +VD C
Sbjct: 710 VGIACGPAQSFAWSSCSEWSIGLRVPFVVDIC 741
Score = 208 (78.3 bits), Expect = 2.5e-26, Sum P(4) = 2.5e-26
Identities = 58/189 (30%), Positives = 94/189 (49%)
Query: 200 HRLVTPTYGSPLIERKDILKDVMI--WGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLE 257
HR++ GS + + + ++ WG+G G +G GS N +P+ +E
Sbjct: 3095 HRVIQVACGSRDAQTLALTDEGLVFSWGDGDFG-KLGRG--GSEGCN-------IPQNIE 3144
Query: 258 SAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQ 317
V I GA+ + +TK G V+ WG+G RLGH ++ V P++VE L G +
Sbjct: 3145 RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIV 3204
Query: 318 SVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
V+ G A+T SG++Y WG N+HG G + + P L L+G ++++VACG
Sbjct: 3205 HVAVGALHCLAVTDSGQVYAWGDNDHGQQ--GNGTTTVNRKPT-LVQGLEGQKITRVACG 3261
Query: 378 EWHTAIVST 386
H+ +T
Sbjct: 3262 SSHSVAWTT 3270
Score = 207 (77.9 bits), Expect = 3.0e-24, Sum P(4) = 3.0e-24
Identities = 121/468 (25%), Positives = 198/468 (42%)
Query: 368 GVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVA 427
G + K G TA + T ++F +G LG + P E+L L V VA
Sbjct: 2885 GSLIRKKTPGLESTATIRT--KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVA 2942
Query: 428 CGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG-HVDGERKLLPTCVTRLVDFDF 486
G + ++ + V+ GK+++ G+A GRLG + +P +T L +
Sbjct: 2943 GG---SKSLFAVTVE--------GKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVV 2991
Query: 487 VQA---SCGRMLTVGLTGLGKVYTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGIS 542
+ S GR T LT GKV++ G G+LG+ + ++E LK + ++ I+
Sbjct: 2992 KKVAVHSGGRHATA-LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIA 3049
Query: 543 SGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
GS H A LTS G +YTWG G+LG GD+ + P V+ L +V V CGS
Sbjct: 3050 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQT 3109
Query: 603 ICLHKS---ISVGD-------QSSCSQCRMPFGFRRKKHN--CY-NCGLHFCSACSTKKI 649
+ L S GD + C +P R C CG F A + +
Sbjct: 3110 LALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGV 3169
Query: 650 INASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQ-GSLSEEVKEEKG 708
+ T KG R+ H++K +++ E + ++++ G+L + G
Sbjct: 3170 V---WTWGKGDYFRLGHGSDVHVRK----PQVV--EGLRGKKIVHVAVGALHCLAVTDSG 3220
Query: 709 ALTPSRGQSFTSKQSRN---VERKPGECLESASSLSSGL--QRWGQVSCPIRFKTHCHEK 763
+ + G + +Q V RKP +L GL Q+ +V+C +H
Sbjct: 3221 QVY-AWGDNDHGQQGNGTTTVNRKP--------TLVQGLEGQKITRVACG---SSH---- 3264
Query: 764 SVEPTPIPKTQMSTHSPLLRKIS---LGSNFIPIASTVEKDLSESNKM 808
SV T + S H P+L + + LG++++ + S + S SNK+
Sbjct: 3265 SVAWTTVDVATPSVHEPVLFQTARDPLGASYLGVPSDADSS-SSSNKI 3311
Score = 197 (74.4 bits), Expect = 3.3e-25, Sum P(4) = 3.3e-25
Identities = 55/158 (34%), Positives = 79/158 (50%)
Query: 221 VMIWGEGVLGGDIG-GAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
V WG+G G +G G DG KT PKL+E LDV + G++ + +TK
Sbjct: 572 VWSWGDGDYG-KLGRGGSDGC----KT------PKLIEKLQDLDVIKVRCGSQFSIALTK 620
Query: 280 EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
+G+V+ WG+G + RLGH V PKL+E L G V V+ G ALT+ E+++WG
Sbjct: 621 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 680
Query: 340 HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
N+ R ++ P L LD + +ACG
Sbjct: 681 SNDQCQHFDTLRVTKPE--PTAL-PGLDTKHIVGIACG 715
Score = 104 (41.7 bits), Expect = 8.2e-14, Sum P(4) = 8.2e-14
Identities = 51/208 (24%), Positives = 87/208 (41%)
Query: 400 VLGHGNLQNVSQPKEVE-SLRGLKVKSVA-CGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
V G +L N+ + K + + V ++ C +H ++I + +C+S+ I K+ G
Sbjct: 2795 VSGGNSLNNLIELKTININQTDTTVPLLSDCAEYHR--YIEIAIKQCRSSGIDCKIH--G 2850
Query: 458 DADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRML---TVGLTGLG----KVYTMGS 510
GR+ + + +P + + + + S G ++ T GL KV+ G
Sbjct: 2851 LILLGRIRAEEEDLAAVPFLASDNEEEEDDKGSTGSLIRKKTPGLESTATIRTKVFVWGL 2910
Query: 511 AVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGL 570
QLG K + L V ++ GS + +T G VY+ G+ NG+LGL
Sbjct: 2911 NDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGL 2970
Query: 571 GDSQER-ETPTFVEALRDRQVESVVCGS 597
G S P + AL V+ V S
Sbjct: 2971 GMSSGTVPIPRQITALSSYVVKKVAVHS 2998
Score = 50 (22.7 bits), Expect = 1.7e-37, Sum P(3) = 1.7e-37
Identities = 16/60 (26%), Positives = 31/60 (51%)
Query: 61 ICKDKVQAESWFLGLRAAISSCRRSRTFSCLREKRG--VQSCVSSPASYIRRKHNLGLLE 118
+C+ K ESW G + ++ + + ++E++ VQS ++ S +R K L +LE
Sbjct: 37 VCRAKSILESWVWGRQPDVNELKECLSV-LVKEQQALAVQSATTT-LSALRLKQRLVILE 94
Score = 41 (19.5 bits), Expect = 4.1e-35, Sum P(4) = 4.1e-35
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 251 LLPKLLESAVMLDVQNISLGAKHAAL 276
LLP+L+ S V+L +N SL + A+
Sbjct: 1077 LLPELVVSIVLLLSKNASLMQEAGAI 1102
Score = 41 (19.5 bits), Expect = 2.0e-23, Sum P(4) = 2.0e-23
Identities = 11/25 (44%), Positives = 14/25 (56%)
Query: 692 LLNLQGSLSEEVKEEKGALTPSRGQ 716
L+NL GS E+ K +K A GQ
Sbjct: 2230 LVNLAGSKLEKHKTKKSAKQAFAGQ 2254
Score = 41 (19.5 bits), Expect = 2.0e-23, Sum P(4) = 2.0e-23
Identities = 16/50 (32%), Positives = 23/50 (46%)
Query: 732 ECLE--SASSLSSGLQRWGQVSCPIRF-KTHCHEKSVEPTPIPKTQMSTH 778
EC + +S S GLQ Q+ K H S TPI K+++ +H
Sbjct: 1276 ECAKWLQSSIFSGGLQT-SQIHYSYNEEKDEDHCSSPGGTPISKSRLCSH 1324
Score = 41 (19.5 bits), Expect = 2.0e-23, Sum P(4) = 2.0e-23
Identities = 16/61 (26%), Positives = 27/61 (44%)
Query: 751 SCPIRFKTHCHEKSVEPTPIPKTQMSTHSPLLRKISLGSNFIPIASTVEKDLSESNKMLN 810
SC + F+ H E+S + + Q L+ K+ G N PI+ T +L +L
Sbjct: 980 SC-LDFEQHSCERSASLDLLLRFQRL----LISKLYPGENIGPISDTSSPELMGVGSLLK 1034
Query: 811 E 811
+
Sbjct: 1035 K 1035
Score = 40 (19.1 bits), Expect = 1.7e-37, Sum P(3) = 1.7e-37
Identities = 18/61 (29%), Positives = 32/61 (52%)
Query: 868 RLHTLSEKISAAKEAKEGVDANLPPKLDTDKHPEVKLPKDRKVDSL-CSSPIVFSNKLKS 926
RLH E+++A +E G+ A + P P + L +++++ C SP + + LKS
Sbjct: 4583 RLHEFDEQVAAVRE---GM-ARVVPV------PLLSLFTGYELETMVCGSPDIPLHLLKS 4632
Query: 927 V 927
V
Sbjct: 4633 V 4633
Score = 39 (18.8 bits), Expect = 2.4e-36, Sum P(3) = 2.4e-36
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 11 GQKEKQLRLNSVTKIIMGQRTVNFQC 36
G QL+ V K+++G R + C
Sbjct: 3078 GDNTTQLKPKMV-KVLLGHRVIQVAC 3102
Score = 39 (18.8 bits), Expect = 8.3e-09, Sum P(4) = 8.3e-09
Identities = 18/64 (28%), Positives = 30/64 (46%)
Query: 492 GR-MLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAV 550
GR +L+ L+G+G Y + + +L + +D + G+L + V SS Y
Sbjct: 3510 GREVLSAVLSGMGIAYPQVADMLLELCVTELEDVATDSQSGRLSSQPVVVESSHPYTDDT 3569
Query: 551 LTSG 554
TSG
Sbjct: 3570 STSG 3573
Score = 38 (18.4 bits), Expect = 4.0e-23, Sum P(4) = 4.0e-23
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 731 GECLESASSL-SSGLQRWGQVSC 752
G+ L A+S+ SS Q + +V+C
Sbjct: 1045 GDILPVAASIASSSWQHFAEVAC 1067
Score = 37 (18.1 bits), Expect = 3.5e-37, Sum P(3) = 3.5e-37
Identities = 8/25 (32%), Positives = 13/25 (52%)
Query: 638 LHFCSACSTKKIINASLTPNKGKPS 662
+HFC + T +LT G+P+
Sbjct: 4730 IHFCKSIDTDDYARIALT---GEPA 4751
Score = 37 (18.1 bits), Expect = 5.0e-23, Sum P(4) = 5.0e-23
Identities = 11/49 (22%), Positives = 18/49 (36%)
Query: 641 CSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKIT-HSGRLLKQENQS 688
C C T I + C+TC+ + T H+ + + QS
Sbjct: 2652 CDGCQTFPINGSRFKCRNCDDFDFCETCFKTKKHNTRHTFGRINEPGQS 2700
>UNIPROTKB|E2RDC2 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0032183 "SUMO binding" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0020037 "heme
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005743
GO:GO:0046872 GO:GO:0008270 GO:GO:0006281 GO:GO:0007283
GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
Gene3D:2.30.30.30 InterPro:IPR021097 InterPro:IPR014722
Pfam:PF11515 SUPFAM:SSF56204 GeneTree:ENSGT00700000104208 CTD:8924
KO:K10595 OMA:QLAFTRD InterPro:IPR006624 SMART:SM00706
EMBL:AAEX03002160 EMBL:AAEX03002161 EMBL:AAEX03002162
RefSeq:XP_536160.2 ProteinModelPortal:E2RDC2
Ensembl:ENSCAFT00000015697 GeneID:479005 KEGG:cfa:479005
Uniprot:E2RDC2
Length = 4837
Score = 472 (171.2 bits), Expect = 4.6e-37, Sum P(3) = 4.6e-37
Identities = 130/392 (33%), Positives = 195/392 (49%)
Query: 224 WGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEV 283
WG G +GG ++G+ + T +AL A + VQ I G + VT +G++
Sbjct: 3960 WGHNHRG-QLGG-IEGAKVKVPTPCEAL-------ATLRPVQLIG-GEQTLFAVTADGKL 4009
Query: 284 FCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGHN 341
+ G G GRLG VS P L+E + + ++ +V+ G AL+ GE+Y+WG
Sbjct: 4010 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEA 4069
Query: 342 NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVL 401
G G R PR + ++L G+ V VA G H+A V+ +G L+T+G G +G L
Sbjct: 4070 EDGKLGHGNRSPCDR--PR-VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4126
Query: 402 GHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADK 461
GH + ++ +PK VE+L+G +V VACG + C ++ +++WGD D
Sbjct: 4127 GHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTL-------CLTD--DDTVWSWGDGDY 4177
Query: 462 GRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA 521
G+LG + +P + L V+ CG +V LT G VYT G + +LG+
Sbjct: 4178 GKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD 4237
Query: 522 KD-RSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPT 580
R V+G L+ + V I++GS H T G VYTWG N GQLG G + + P
Sbjct: 4238 DHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPR 4296
Query: 581 FVEALRDRQVESVVCGSSITAAICLHKSISVG 612
V AL+ ++V V CGS+ T A K S G
Sbjct: 4297 LVAALQGKKVNRVACGSAHTLAWSTSKPASAG 4328
Score = 458 (166.3 bits), Expect = 1.5e-35, Sum P(3) = 1.5e-35
Identities = 117/355 (32%), Positives = 182/355 (51%)
Query: 252 LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMD-VSCPKLVEC 310
+P E+ L+V ++ G+K VT EG+V+ GE +GRLG ++ V P+ +
Sbjct: 2983 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITA 3042
Query: 311 LSGINVQSVSC--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
LS V+ V+ G ALT G++++WG + G +G SR + +L + L
Sbjct: 3043 LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK--LGHF-SRMNCDKPRLIEALKT 3099
Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
R+ +ACG H+A +++SG+L+T+G G +G LGHG+ +PK V+ L G +V VAC
Sbjct: 3100 KRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 3159
Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ 488
G + + D G +F+WGD D G+LG E +P + RL Q
Sbjct: 3160 GSRDAQTLA--LTDE-------GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQ 3210
Query: 489 ASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK-AKDRSITVVEGKLKEEFVKGISSGSYH 547
CG ++ LT G V+T G + +LG+ R VVEG L+ + + ++ G+ H
Sbjct: 3211 IECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALH 3269
Query: 548 VAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
+T G VY WG N +GQ G G + PT V+ L +++ V CGSS + A
Sbjct: 3270 CLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3324
Score = 417 (151.9 bits), Expect = 4.4e-31, Sum P(3) = 4.4e-31
Identities = 104/325 (32%), Positives = 164/325 (50%)
Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISL--GAKHAALVTKEGEVFCWGEGKD 291
G A +G + + +P+ + + V+ +++ G +HA +T +G+VF WGEG D
Sbjct: 3018 GEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3077
Query: 292 GRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER 351
G+LGH M+ P+L+E L ++ ++CG + ALT SGE+YTWG +G +G
Sbjct: 3078 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR--LGHG 3135
Query: 352 RSRSHWLPRKLFDTLDGVRVSKVACG--EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV 409
+ + P K+ L G RV +VACG + T ++ G +F++GDG FG LG G +
Sbjct: 3136 DNTTQLKP-KMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 3194
Query: 410 SQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDG 469
+ P+ +E L G V + CG + A+ KS G ++TWG D RLGH
Sbjct: 3195 NIPQNIERLNGQGVCQIECGAQFSLALT-------KS----GVVWTWGKGDYFRLGHGSD 3243
Query: 470 ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAK-DRSITV 528
P V L V + G + + +T G+VY G HGQ GN +R T+
Sbjct: 3244 VHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTL 3303
Query: 529 VEGKLKEEFVKGISSGSYHVAVLTS 553
V+G L+ + + ++ GS H T+
Sbjct: 3304 VQG-LEGQKITRVACGSSHSVAWTT 3327
Score = 389 (142.0 bits), Expect = 4.6e-28, Sum P(3) = 4.6e-28
Identities = 109/344 (31%), Positives = 166/344 (48%)
Query: 253 PKLLESAVMLDVQNISL--GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVEC 310
P LLES + ++ +++ G KH ++ EGEV+ WGE +DG+LGH P+++E
Sbjct: 4031 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4090
Query: 311 LSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR 370
L GI V V+ G + +T +G++YTWG +G +G S P KL + L G R
Sbjct: 4091 LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR--LGHSDSEDQLKP-KLVEALQGHR 4147
Query: 371 VSKVACG--EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
V VACG + T ++ ++++GDG +G LG G P +++SL GL V V C
Sbjct: 4148 VVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC 4207
Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ 488
G + A+ KS A+ +TWG D RLGH + P V L +
Sbjct: 4208 GSQFSVALT-------KSGAV----YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIA 4256
Query: 489 ASCGRMLTVGLTGLGKVYTMGSAVHGQLG----NPKAKDRSITVVEGKLKEEFVKGISSG 544
+ G + V T G+VYT G GQLG N + R + ++GK V ++ G
Sbjct: 4257 IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKK----VNRVACG 4312
Query: 545 SYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDR 588
S H ++ GK Q+ + + +E P + ALR+R
Sbjct: 4313 SAHTLAWSTSKPASA-GK-LPAQVPMEYNHLQEIP--IIALRNR 4352
Score = 376 (137.4 bits), Expect = 1.1e-26, Sum P(3) = 1.1e-26
Identities = 102/338 (30%), Positives = 163/338 (48%)
Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
++ + G + AA + + VF WG +LG + P E LS +NV V+ G
Sbjct: 2945 IRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 3002
Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC--GEWHT 381
A+T G++Y G +G +G S + +PR++ L V KVA G H
Sbjct: 3003 KSLFAVTVEGKVYACGEATNGRLGLG-LSSGTVPIPRQI-TALSSYVVKKVAVHSGGRHA 3060
Query: 382 AIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMV 441
++ G++F++G+G G LGH + N +P+ +E+L+ +++ +ACG H+AA+
Sbjct: 3061 TALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTS--- 3117
Query: 442 DRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRM--LTVGL 499
G+L+TWG + GRLGH D +L P V L+ +Q +CG T+ L
Sbjct: 3118 --------SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3169
Query: 500 TGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYT 559
T G V++ G G+LG ++ +I +L + V I G+ LT G V+T
Sbjct: 3170 TDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWT 3229
Query: 560 WGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGS 597
WGK +LG G P VE LR +++ V G+
Sbjct: 3230 WGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGA 3267
Score = 376 (137.4 bits), Expect = 1.1e-26, Sum P(3) = 1.1e-26
Identities = 122/411 (29%), Positives = 182/411 (44%)
Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
G ++ WG G+LG V P E L+ + + GE A+T G++Y G+
Sbjct: 3955 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4014
Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC--GEWHTAIVSTSGQLFTYGDGTF 398
G +G S S P L +++ V + KVA G H +S+ G+++++G+
Sbjct: 4015 GAGGRLGIGGTESVS--TPT-LLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4071
Query: 399 GVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
G LGHGN +P+ +ESLRG++V VA G H+A C + A G L+TWG
Sbjct: 4072 GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSA---------CVTAA--GDLYTWGK 4120
Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAVHGQL 516
GRLGH D E +L P V L V +CG T+ LT V++ G +G+L
Sbjct: 4121 GRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKL 4180
Query: 517 GNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQER 576
G + + + L V + GS LT G+VYTWGK +LG G
Sbjct: 4181 GRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV 4240
Query: 577 ETPTFVEALRDRQVESVVCGSSITAAICLHKS------------ISVGDQSSCSQCRMPF 624
P V+ L+ ++V ++ GS + C + G ++ + R+
Sbjct: 4241 RRPRQVQGLQGKKVIAIATGS-LHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVA 4299
Query: 625 GFRRKKHNCYNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKI 675
+ KK N CG A ST K +A P + P YNHLQ+I
Sbjct: 4300 ALQGKKVNRVACGSAHTLAWSTSKPASAGKLPAQ-VPME-----YNHLQEI 4344
Score = 347 (127.2 bits), Expect = 3.5e-22, Sum P(4) = 3.5e-22
Identities = 105/391 (26%), Positives = 176/391 (45%)
Query: 245 KTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC 304
K + + P E L V I+ K ++++ G V+ N D
Sbjct: 435 KYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLA 484
Query: 305 PKLVECLSGINVQSVSCGE--FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL 362
P+LV+ L+ N+ ++ AL +GE+Y+WG + G +G + P K+
Sbjct: 485 PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGR--LGHGDTVPLEEP-KV 541
Query: 363 FDTLDGVRVSK----VACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESL 418
G + K +ACG ++A ++ G+L+T+G G +G LGHG+ ++ + P V L
Sbjct: 542 ISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL 601
Query: 419 RGLKVKSVACGPW--HTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPT 476
+GLKV VACG T A+ + G++++WGD D G+LG + P
Sbjct: 602 KGLKVIDVACGSGDAQTLAVTE-----------NGQVWSWGDGDYGKLGRGGSDGCKTPK 650
Query: 477 CVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD-RSITVVEGKLKE 535
+ +L D D V+ CG ++ LT G+VY+ G + +LG+ + R ++EG L+
Sbjct: 651 LIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG-LQG 709
Query: 536 EFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVC 595
+ V +++GS H LT V++WG N Q + P + L + + + C
Sbjct: 710 KKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIAC 769
Query: 596 G--SSITAAICLHKSISVGDQSSCSQCRMPF 624
G S + C SI + C M F
Sbjct: 770 GPAQSFAWSSCSEWSIGLRVPFVVDICSMTF 800
Score = 272 (100.8 bits), Expect = 2.8e-14, Sum P(4) = 2.8e-14
Identities = 79/274 (28%), Positives = 131/274 (47%)
Query: 332 SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
SG IY WGHN+ G L G ++ +P + L +R ++ GE V+ G+L+
Sbjct: 3954 SGTIYGWGHNHRG-QLGGIEGAKVK-VPTPC-EALATLRPVQLIGGEQTLFAVTADGKLY 4010
Query: 392 TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
G G G LG G ++VS P +ES++ + +K VA V+ C + + G
Sbjct: 4011 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVA---------VNSGGKHCLALSSEG 4061
Query: 452 KLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
++++WG+A+ G+LGH + P + L + V + G + +T G +YT G
Sbjct: 4062 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4121
Query: 512 VHGQLGNPKAKDR-SITVVEGKLKEEFVK-GISSGSYHVAVLTSGGSVYTWGKNANGQLG 569
+G+LG+ ++D+ +VE V SG LT +V++WG G+LG
Sbjct: 4122 RYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4181
Query: 570 LGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
G S + P +++L V V CGS + A+
Sbjct: 4182 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4215
Score = 252 (93.8 bits), Expect = 3.4e-12, Sum P(4) = 3.4e-12
Identities = 67/198 (33%), Positives = 102/198 (51%)
Query: 244 NKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVS 303
N TQ+ + K+L ++ V S A+ AL T EG VF WG+G G+LG + +
Sbjct: 3137 NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL-TDEGLVFSWGDGDFGKLGRGGSEGCN 3195
Query: 304 CPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLF 363
P+ +E L+G V + CG + ALTKSG ++TWG ++ +G S H ++
Sbjct: 3196 IPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFR--LGHG-SDVHVRKPQVV 3252
Query: 364 DTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKV 423
+ L G ++ VA G H V+ +GQ++ +GD G G+G +P V+ L G K+
Sbjct: 3253 EGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKI 3312
Query: 424 KSVACGPWHTAAIVDIMV 441
VACG H+ A I V
Sbjct: 3313 TRVACGSSHSVAWTTIDV 3330
Score = 238 (88.8 bits), Expect = 9.3e-11, Sum P(4) = 9.3e-11
Identities = 85/332 (25%), Positives = 154/332 (46%)
Query: 292 GRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER 351
G +G K +V P E L+ + V ++C E + L+++G +YT +N+ D + +
Sbjct: 430 GLIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNS---DTLAPQ 486
Query: 352 RSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQ 411
+ R + V+++ + G + A+ +T G+++++G G G LGHG+ + +
Sbjct: 487 LVQG-LASRNI------VKIAAHSDGHHYLALAAT-GEVYSWGCGDGGRLGHGDTVPLEE 538
Query: 412 PKEVESLRGLK----VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHV 467
PK + + G + V +ACG ++AAI G+L D+ V
Sbjct: 539 PKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 598
Query: 468 DGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD-RSI 526
G + L +++D V G T+ +T G+V++ G +G+LG + ++
Sbjct: 599 AGLKGL------KVID---VACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTP 649
Query: 527 TVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALR 586
++E KL++ V + GS LT G VY+WGK N +LG G + P +E L+
Sbjct: 650 KLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQ 708
Query: 587 DRQVESVVCGSSITAAICLHKSI-SVGDQSSC 617
++V V GS+ A+ + S G C
Sbjct: 709 GKKVIDVAAGSTHCLALTEDSEVHSWGSNDQC 740
Score = 231 (86.4 bits), Expect = 2.6e-11, Sum P(3) = 2.6e-11
Identities = 61/190 (32%), Positives = 92/190 (48%)
Query: 198 ESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLE 257
+ HR+V GS + + D +W G GD G G K +P ++
Sbjct: 4144 QGHRVVDVACGSGDAQTLCLTDDDTVWSWG--DGDYGKLGRGGSDGCK------VPMKID 4195
Query: 258 SAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQ 317
S L V + G++ + +TK G V+ WG+G RLGH + V P+ V+ L G V
Sbjct: 4196 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4255
Query: 318 SVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
+++ G T+ GE+YTWG N+ G +G+ + + PR L L G +V++VACG
Sbjct: 4256 AIATGSLHCVCCTEDGEVYTWGDNDEGQ--LGDGTTNAIQRPR-LVAALQGKKVNRVACG 4312
Query: 378 EWHTAIVSTS 387
HT STS
Sbjct: 4313 SAHTLAWSTS 4322
Score = 218 (81.8 bits), Expect = 7.0e-25, Sum P(4) = 7.0e-25
Identities = 73/232 (31%), Positives = 105/232 (45%)
Query: 378 EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
+W T SG ++ +G G LG V P E+L L+ + G A+
Sbjct: 3946 DW-TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4004
Query: 438 DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRL--VDFDFVQASCGRML 495
D GKL+ G GRLG E PT + + V V + G
Sbjct: 4005 ---AD--------GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKH 4053
Query: 496 TVGLTGLGKVYTMGSAVHGQLG--NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTS 553
+ L+ G+VY+ G A G+LG N DR V+E L+ V +++G H A +T+
Sbjct: 4054 CLALSSEGEVYSWGEAEDGKLGHGNRSPCDRP-RVIES-LRGIEVVDVAAGGAHSACVTA 4111
Query: 554 GGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
G +YTWGK G+LG DS+++ P VEAL+ +V V CGS +CL
Sbjct: 4112 AGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCL 4163
Score = 205 (77.2 bits), Expect = 1.6e-23, Sum P(4) = 1.6e-23
Identities = 84/301 (27%), Positives = 127/301 (42%)
Query: 368 GVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVA 427
G + K A G A + T ++F +G LG + P E+L L V VA
Sbjct: 2942 GSLIRKKAAGLESAATIRT--KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVA 2999
Query: 428 CGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG-HVDGERKLLPTCVTRLVDFDF 486
G + ++ + V+ GK++ G+A GRLG + +P +T L +
Sbjct: 3000 GG---SKSLFAVTVE--------GKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVV 3048
Query: 487 VQA---SCGRMLTVGLTGLGKVYTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGIS 542
+ S GR T LT GKV++ G G+LG+ + ++E LK + ++ I+
Sbjct: 3049 KKVAVHSGGRHATA-LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIA 3106
Query: 543 SGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
GS H A LTS G +YTWG G+LG GD+ + P V+ L +V V CGS
Sbjct: 3107 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQT 3166
Query: 603 ICLHKS---ISVGD-------QSSCSQCRMPFGFRRKKHN--CY-NCGLHFCSACSTKKI 649
+ L S GD + C +P R C CG F A + +
Sbjct: 3167 LALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGV 3226
Query: 650 I 650
+
Sbjct: 3227 V 3227
Score = 198 (74.8 bits), Expect = 7.0e-25, Sum P(4) = 7.0e-25
Identities = 55/158 (34%), Positives = 79/158 (50%)
Query: 221 VMIWGEGVLGGDIG-GAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
V WG+G G +G G DG KT PKL+E LDV + G++ + +TK
Sbjct: 627 VWSWGDGDYG-KLGRGGSDGC----KT------PKLIEKLQDLDVVKVRCGSQFSIALTK 675
Query: 280 EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
+G+V+ WG+G + RLGH V PKL+E L G V V+ G ALT+ E+++WG
Sbjct: 676 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Query: 340 HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
N+ R ++ P L LD + +ACG
Sbjct: 736 SNDQCQHFDTLRVTKPE--PAAL-PGLDTKHIVGIACG 770
Score = 95 (38.5 bits), Expect = 2.1e-12, Sum P(4) = 2.1e-12
Identities = 43/178 (24%), Positives = 72/178 (40%)
Query: 428 CGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFV 487
C +H ++I + +C+S+ I K+ G GR+ + + +P + + +
Sbjct: 2882 CTEYHR--YIEIAIKQCRSSGIDCKIH--GLILLGRIRAEEEDLAAVPFLASDNEEEEDE 2937
Query: 488 QASCGRMLTVGLTGLG-------KVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKG 540
+ + G ++ GL KV+ G QLG K + L V
Sbjct: 2938 KGNSGSLIRKKAAGLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQ 2997
Query: 541 ISSGSYHVAVLTSGGSVYTWGKNANGQLGLG-DSQERETPTFVEALRDRQVESVVCGS 597
++ GS + +T G VY G+ NG+LGLG S P + AL V+ V S
Sbjct: 2998 VAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHS 3055
Score = 44 (20.5 bits), Expect = 4.6e-37, Sum P(3) = 4.6e-37
Identities = 15/59 (25%), Positives = 30/59 (50%)
Query: 62 CKDKVQAESWFLGLRAAISSCRRSRTFSCLREKRG--VQSCVSSPASYIRRKHNLGLLE 118
C+ K ESW G + ++ + + ++E++ +QS ++ S +R K L +LE
Sbjct: 93 CRAKSILESWVWGKQPDVNELKECLSV-LVKEQQTLTIQSATTT-LSALRLKQRLVILE 149
Score = 40 (19.1 bits), Expect = 4.6e-37, Sum P(3) = 4.6e-37
Identities = 18/61 (29%), Positives = 32/61 (52%)
Query: 868 RLHTLSEKISAAKEAKEGVDANLPPKLDTDKHPEVKLPKDRKVDSL-CSSPIVFSNKLKS 926
RLH E+++A +E G+ A + P P + L +++++ C SP + + LKS
Sbjct: 4641 RLHEFDEQVAAVRE---GM-ARVVPV------PLLSLFTGYELETMVCGSPDIPLHLLKS 4690
Query: 927 V 927
V
Sbjct: 4691 V 4691
Score = 39 (18.8 bits), Expect = 1.5e-36, Sum P(3) = 1.5e-36
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 11 GQKEKQLRLNSVTKIIMGQRTVNFQC 36
G QL+ V K+++G R + C
Sbjct: 3135 GDNTTQLKPKMV-KVLLGHRVIQVAC 3159
Score = 37 (18.1 bits), Expect = 9.4e-37, Sum P(3) = 9.4e-37
Identities = 8/25 (32%), Positives = 13/25 (52%)
Query: 638 LHFCSACSTKKIINASLTPNKGKPS 662
+HFC + T +LT G+P+
Sbjct: 4788 IHFCKSIDTDDYARIALT---GEPA 4809
Score = 37 (18.1 bits), Expect = 3.5e-22, Sum P(4) = 3.5e-22
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 723 SRNVERKPGECLESASSLSSGLQRWG 748
S ++ RK LESA+++ + + WG
Sbjct: 2941 SGSLIRKKAAGLESAATIRTKVFVWG 2966
Score = 37 (18.1 bits), Expect = 2.8e-14, Sum P(4) = 2.8e-14
Identities = 11/56 (19%), Positives = 27/56 (48%)
Query: 303 SCPKLVECLSGINVQS-VSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHW 357
S P ++ + V+S V+ +++ ++T + +G D++ + +SHW
Sbjct: 2635 SSPSHIKIGDKVRVKSSVTTPKYKWGSVTHQSVGIVKAFSANGKDVIVDFPQQSHW 2690
Score = 37 (18.1 bits), Expect = 3.4e-12, Sum P(4) = 3.4e-12
Identities = 17/64 (26%), Positives = 30/64 (46%)
Query: 492 GR-MLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAV 550
GR +L+ L+G+G Y + + +L + +D + G+L + V SS Y
Sbjct: 3568 GREVLSAVLSGMGTAYPQVADMLLELCVTELEDVATDSQSGRLSSQPVVVESSHPYTDDT 3627
Query: 551 LTSG 554
+SG
Sbjct: 3628 SSSG 3631
>UNIPROTKB|E1C4H7 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] Pfam:PF00632 InterPro:IPR017986
InterPro:IPR000569 InterPro:IPR001680 InterPro:IPR003877
InterPro:IPR015880 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00622
PROSITE:PS50082 PROSITE:PS50237 PROSITE:PS50294 SMART:SM00119
SMART:SM00320 SMART:SM00355 INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008270 GO:GO:0016567 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 SUPFAM:SSF56204
OMA:HHYQDGI GeneTree:ENSGT00700000104312 EMBL:AADN02040444
EMBL:AADN02040445 EMBL:AADN02040446 IPI:IPI00593079
Ensembl:ENSGALT00000005344 Uniprot:E1C4H7
Length = 4863
Score = 464 (168.4 bits), Expect = 6.3e-37, Sum P(2) = 6.3e-37
Identities = 121/388 (31%), Positives = 188/388 (48%)
Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
DV +WG G G + A +N V P ++ Q + G ++
Sbjct: 3998 DVYLWGAG-RHGQLAEA-----GRN-VMVPVAAPSFSQA------QQVVCGQNCTFVIQA 4044
Query: 280 EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSV--SCG-EFQTCALTKSGEIY 336
G V GEG GRLG + D+ ++ L G V + SCG + + ALT+SGE++
Sbjct: 4045 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4104
Query: 337 TWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG 396
+WG ++G +G S PR++ + L G V +++CG H+A+V+ G+LFT+G+G
Sbjct: 4105 SWGDGDYGK--LGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHSAVVTADGKLFTFGNG 4161
Query: 397 TFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
+G LG GN N P+ V +L G ++ VACG HT A+ + G ++ +
Sbjct: 4162 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTVAV----------STDGSMVWAF 4211
Query: 457 GDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
GD D G+LG + K P V L + +CG +V LT G VYT G +
Sbjct: 4212 GDGDYGKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQVSDRLI 4271
Query: 517 GNPKAKDRSITVVEGK--LKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQ 574
G P+ + R+ + L F++ I+ G+ H L+S G VY WG N+ GQLGLG +
Sbjct: 4272 GLPEGRARNHNRPQQVPVLSGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTN 4331
Query: 575 ERETPTFVEALRDRQVESVVCGSSITAA 602
PT + L+ + + + G +AA
Sbjct: 4332 HVREPTLITVLQGKNIRQISAGRCHSAA 4359
Score = 370 (135.3 bits), Expect = 6.8e-27, Sum P(2) = 6.8e-27
Identities = 103/358 (28%), Positives = 173/358 (48%)
Query: 268 SLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTC 327
S+ A +V++ EV+ WG +L + PKL S + Q++ G++ T
Sbjct: 359 SIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFS--DAQTIEAGQYCTF 416
Query: 328 ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR-VSKVACGEWHTAIVST 386
++ G + G ++G +G+ ++S L + F+ ++ VS + HT +T
Sbjct: 417 VISTDGSVRACGKGSYGRLGLGDSNNQST-LKKLTFEPHRSIKKVSSSKGSDGHTLAFTT 475
Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCK 445
G++F++GDG +G LGHGN PK ++ L+G V V+ G H+AA+ + D
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE---D--- 529
Query: 446 SNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK- 504
G+L+TWG+ D GRLGH D + +PT V + + + SCG T+ L+ G+
Sbjct: 530 -----GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRT 582
Query: 505 VYTMGSAVHGQLGNPKA-KDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKN 563
V++ G +G+LG+ + V+E L+ F++ + +GS LTS G VY WG
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQSSLALTSTGQVYAWGCG 641
Query: 564 ANGQLGLGDSQERET-PTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQC 620
A LG G S+ P +E L ++ + G S A+ + +S QC
Sbjct: 642 AC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQC 697
Score = 359 (131.4 bits), Expect = 7.7e-25, Sum P(3) = 7.7e-25
Identities = 112/362 (30%), Positives = 168/362 (46%)
Query: 246 TQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG-HKVNMDVSC 304
TQ L PKL S D Q I G +++ +G V G+G GRLG N +
Sbjct: 389 TQEKILQPKLAPS--FSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTL 446
Query: 305 PKLV-ECLSGINVQSVSCG-EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL 362
KL E I S S G + T A T GE+++WG ++G +G S + P+ +
Sbjct: 447 KKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGK--LGHGNSSTQKYPKLI 504
Query: 363 FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLK 422
L G V V+ G H+A V+ G+L+T+G+G FG LGHG+ + + P V+ +
Sbjct: 505 QGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN-- 562
Query: 423 VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLV 482
V V+CG HT A+ + G ++++G D G+LGH D R P + L
Sbjct: 563 VGEVSCGSSHTIAL----------SKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQ 612
Query: 483 DFDFVQASC-GRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGI 541
F++ C G ++ LT G+VY G G+ +A ++E +L + I
Sbjct: 613 GM-FIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRPKLIE-ELAATRIVDI 670
Query: 542 SSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGSSIT 600
S G H L+ VY WG N+ GQ G G+S T P V L ++ + G+S +
Sbjct: 671 SIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVSIQQISAGTSHS 730
Query: 601 AA 602
A
Sbjct: 731 LA 732
Score = 343 (125.8 bits), Expect = 1.3e-22, Sum P(3) = 1.3e-22
Identities = 102/329 (31%), Positives = 162/329 (49%)
Query: 273 HAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKS 332
H+ +T+ GEVF WG+G G+LGH + P+ +E L G V +SCG + +T
Sbjct: 4093 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTAD 4152
Query: 333 GEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQL-F 391
G+++T+G+ ++G +G ++ LP ++ L+G ++ +VACG HT VST G + +
Sbjct: 4153 GKLFTFGNGDYGRLGLGNTSNKK--LPERV-TALEGYQIGQVACGLNHTVAVSTDGSMVW 4209
Query: 392 TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
+GDG +G LG GN S P++V+ L G+ +K VACG + A+ G
Sbjct: 4210 AFGDGDYGKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVALTK-----------DG 4258
Query: 452 KLFTWGDADKGRLGHVDGERKL--LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMG 509
++T+G +G +G + P V L + G T+ L+ G VY G
Sbjct: 4259 HVYTFGQVSDRLIGLPEGRARNHNRPQQVPVLSGVFIEDIAVGAEHTLALSSTGDVYAWG 4318
Query: 510 SAVHGQLG----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGG-SVYTWGKNA 564
S GQLG N + ITV++GK ++ IS+G H A T+ G +
Sbjct: 4319 SNSEGQLGLGHTNHVREPTLITVLQGKN----IRQISAGRCHSAAWTAPPVPPRAPGVSV 4374
Query: 565 NGQLGLGDSQERETPTFVEALRDRQVESV 593
QLGL D+ P AL++ + +V
Sbjct: 4375 PLQLGLPDA----IPPQYGALKEVSIHTV 4399
Score = 307 (113.1 bits), Expect = 2.4e-18, Sum P(4) = 2.4e-18
Identities = 87/307 (28%), Positives = 150/307 (48%)
Query: 334 EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
++Y WG HG + E R+ +P + +V CG+ T ++ +G +
Sbjct: 3998 DVYLWGAGRHGQ--LAEA-GRNVMVP---VAAPSFSQAQQVVCGQNCTFVIQANGTVLAC 4051
Query: 394 GDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSV--ACGP-WHTAAIVDIMVDRCKSNAIG 450
G+G++G LG GN ++ + +L+G V + +CG H+ A+ +
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----------S 4100
Query: 451 GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
G++F+WGD D G+LGH + +R+ P + L + VQ SCG + +T GK++T G+
Sbjct: 4101 GEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGN 4160
Query: 511 AVHGQLG-----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
+G+LG N K +R +T +EG + G++ + VAV T G V+ +G
Sbjct: 4161 GDYGRLGLGNTSNKKLPER-VTALEGYQIGQVACGLN---HTVAVSTDGSMVWAFGDGDY 4216
Query: 566 GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFG 625
G+LGLG+S + +P V+ L ++ V CG+ + A+ + Q S +P G
Sbjct: 4217 GKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQVSDRLIGLPEG 4276
Query: 626 FRRKKHN 632
R + HN
Sbjct: 4277 -RARNHN 4282
Score = 265 (98.3 bits), Expect = 7.3e-15, Sum P(3) = 7.3e-15
Identities = 81/287 (28%), Positives = 141/287 (49%)
Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQN-ISLGAKHAALVT 278
+V WG+G D G G+ S K PKL++ + V +S G +H+A VT
Sbjct: 478 EVFSWGDG----DYGKLGHGNSSTQK------YPKLIQGPLQGKVVVCVSAGYRHSAAVT 527
Query: 279 KEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGE-IYT 337
++GE++ WGEG GRLGH + + P LV+ +S NV VSCG T AL+K G +++
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWS 585
Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
+G ++G +G + + P K+ + L G+ + KV G + ++++GQ++ +G G
Sbjct: 586 FGGGDNGK--LGHGDTNRVYKP-KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA 642
Query: 398 FGVLGHGNLQNVS-QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
LG G+ + + +PK +E L ++ ++ G H C + + +++ W
Sbjct: 643 --CLGCGSSEATALRPKLIEELAATRIVDISIGDSH-----------CLALSHDNEVYAW 689
Query: 457 GDADKGRLGHVDGERKLL-PTCVTRLVDFDFVQASCGRMLTVGLTGL 502
G+ G+ G + + P V+ L Q S G ++ T L
Sbjct: 690 GNNSMGQCGQGNSTGPITKPKKVSGLDGVSIQQISAGTSHSLAWTAL 736
Score = 255 (94.8 bits), Expect = 8.1e-14, Sum P(3) = 8.1e-14
Identities = 68/227 (29%), Positives = 118/227 (51%)
Query: 220 DVMIWGEGVLGGDIGGAVDG-SVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVT 278
++ WGEG D G G S S+N +P L++ + +V +S G+ H ++
Sbjct: 531 ELYTWGEG----DFGRLGHGDSNSRN-------IPTLVKD--ISNVGEVSCGSSHTIALS 577
Query: 279 KEGE-VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
K+G V+ +G G +G+LGH V PK++E L G+ ++ V G + ALT +G++Y
Sbjct: 578 KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYA 637
Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
WG GA L G S + L KL + L R+ ++ G+ H +S +++ +G+ +
Sbjct: 638 WGC---GACL-GCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNS 693
Query: 398 FGVLGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
G G GN +++PK+V L G+ ++ ++ G H+ A + DR
Sbjct: 694 MGQCGQGNSTGPITKPKKVSGLDGVSIQQISAGTSHSLAWTALPRDR 740
Score = 201 (75.8 bits), Expect = 2.3e-07, Sum P(4) = 2.3e-07
Identities = 69/242 (28%), Positives = 114/242 (47%)
Query: 378 EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
+WH + ++ +G G G L +NV P S + + V CG T I
Sbjct: 3990 DWH---LGGKCDVYLWGAGRHGQLAEAG-RNVMVPVAAPSFS--QAQQVVCGQNCTFVI- 4042
Query: 438 DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ--ASCGRM- 494
++N G + G+ GRLG + + + T ++ L F Q SCG
Sbjct: 4043 -------QAN---GTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDG 4092
Query: 495 LTVGLTGLGKVYTMGSAVHGQLGNPKA-KDRSITVVEGKLKEEFVKGISSGSYHVAVLTS 553
++ LT G+V++ G +G+LG+ + + R +E EE V+ +S G H AV+T+
Sbjct: 4093 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQ-MSCGFKHSAVVTA 4151
Query: 554 GGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSI--SV 611
G ++T+G G+LGLG++ ++ P V AL Q+ V CG + T A+ S+ +
Sbjct: 4152 DGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTVAVSTDGSMVWAF 4211
Query: 612 GD 613
GD
Sbjct: 4212 GD 4213
Score = 47 (21.6 bits), Expect = 5.1e-26, Sum P(3) = 5.1e-26
Identities = 58/244 (23%), Positives = 93/244 (38%)
Query: 783 RKISLGSNFIPIASTVEKDLSESNKMLNEEVQRLRDQARNLEKQCQIGNQKVQECQQKIE 842
R I SN+ + S E DLS+ +EE L + RN++ ++K ++E
Sbjct: 1496 RSIHANSNYRLMKSRSESDLSQPES--DEEGYSLSGR-RNVDLDLASSHRKRGAIHSQVE 1552
Query: 843 ---EAWSLARXXXXXXXXXXXXXXXLAVRLHTLSEKISAAKEAKEGVDANLPPKLDTDKH 899
++W AR + LS + E V + + D
Sbjct: 1553 PLTDSW--ARLKHSRDWLYTSSYSFIESDFD-LSRSLGV-HTLIENVVSFVSG--DVGNS 1606
Query: 900 PEVKLPKDRKVDSLCSSPIVFSNK-LKSVYGRELCHDNS---SGSVEDSKVARTEPQQ-K 954
P K P++ S +S I + L++ E H SG E VA Q
Sbjct: 1607 PGFKEPEESMSTSPQASIIAMEQQQLRAELRLEALHQILVLLSGMEEKGSVALMGSHQGP 1666
Query: 955 GTKASKL--EYAEQYEPGIYITFTTLPSGQKGLKRVRFSRRRFTEKAAERWWE-ENQVVV 1011
G ++S L Q+ G + T +G KG + VR + +AA+R + E QV V
Sbjct: 1667 GFQSSSLLTSVRLQFLAGCFGLGTVGHAGAKG-ESVRLHHYQDGIRAAKRSIQIEIQVAV 1725
Query: 1012 YQKY 1015
++ Y
Sbjct: 1726 HKIY 1729
Score = 46 (21.3 bits), Expect = 2.4e-18, Sum P(4) = 2.4e-18
Identities = 12/50 (24%), Positives = 20/50 (40%)
Query: 314 INVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLF 363
+ + S + G+F TC L ++G N L E + P +F
Sbjct: 2126 LTLSSFTQGDFITCVLDMEARTISFGKNGEEPKLAFEDVDAAELYPCVMF 2175
Score = 44 (20.5 bits), Expect = 1.0e-25, Sum P(3) = 1.0e-25
Identities = 12/51 (23%), Positives = 23/51 (45%)
Query: 668 CYNH--LQKITHSGRLLKQENQSPRNLLNLQGSLSEEVKEEKGALTPSRGQ 716
C N ++++ LK+ Q + ++Q EV+EEK +G+
Sbjct: 2232 CINKKMMERLNKIKTCLKEAGQKLKKSRSIQSREENEVREEKENKEEEKGK 2282
Score = 42 (19.8 bits), Expect = 1.3e-22, Sum P(3) = 1.3e-22
Identities = 21/63 (33%), Positives = 33/63 (52%)
Query: 240 SVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVN 299
SVS+N + V ALL K L+ +L + ++ A L+ KE W +G +G K+
Sbjct: 1004 SVSENSSSV-ALLHKHLQ---LLLPHATDIYSRSATLL-KESS---W----NGSVGEKLR 1051
Query: 300 MDV 302
+DV
Sbjct: 1052 VDV 1054
Score = 42 (19.8 bits), Expect = 6.2e-18, Sum P(4) = 6.2e-18
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 316 VQSVSCG-EFQTCALTKSGEIYTWGHNNHGADL 347
+Q VS E C + ++G+I T G G L
Sbjct: 2030 IQEVSFDPEKAQCCIVENGQILTHGSGGKGYGL 2062
Score = 38 (18.4 bits), Expect = 6.8e-27, Sum P(2) = 6.8e-27
Identities = 13/45 (28%), Positives = 23/45 (51%)
Query: 980 SGQKGLKRVR-FSRRRFTEKAAERWWEENQVVVYQKYGIEEYSNL 1023
+GQK LK+ R R E E+ +E + + ++G+ + S L
Sbjct: 2251 AGQK-LKKSRSIQSREENEVREEKENKEEEKGKHNRHGLADLSEL 2294
Score = 37 (18.1 bits), Expect = 6.3e-37, Sum P(2) = 6.3e-37
Identities = 7/18 (38%), Positives = 14/18 (77%)
Query: 1005 EENQVVVYQKYGIEEYSN 1022
E++Q+V + + +EE+SN
Sbjct: 4751 EQHQLVQWFWHTLEEFSN 4768
>UNIPROTKB|G3MX12 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0020037 "heme binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0046872 GO:GO:0008270
GO:GO:0020037 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.10.120.10 SUPFAM:SSF55856
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256
PROSITE:PS51284 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 InterPro:IPR006624 SMART:SM00706
EMBL:DAAA02003804 EMBL:DAAA02003805 Ensembl:ENSBTAT00000063010
Uniprot:G3MX12
Length = 4757
Score = 465 (168.7 bits), Expect = 8.3e-36, Sum P(3) = 8.3e-36
Identities = 129/392 (32%), Positives = 194/392 (49%)
Query: 224 WGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEV 283
WG G +GG ++G+ + T +AL A + VQ I G + VT +G++
Sbjct: 3880 WGHNHRG-QLGG-IEGAKVKVPTPCEAL-------AALRPVQLIG-GEQTLFAVTADGKL 3929
Query: 284 FCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGHN 341
+ G G GRLG VS P L+E + + ++ +V+ G AL+ GE+Y+WG
Sbjct: 3930 YATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEA 3989
Query: 342 NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVL 401
G G R PR + ++L G V VA G H+A V+ +G L+T+G G +G L
Sbjct: 3990 EDGKLGHGNRSPCDR--PR-VIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4046
Query: 402 GHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADK 461
GH + ++ +PK VE+L+G +V VACG + C ++ +++WGD D
Sbjct: 4047 GHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTL-------CLTD--DDTVWSWGDGDY 4097
Query: 462 GRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA 521
G+LG + +P + L V+ CG +V LT G VYT G + +LG+
Sbjct: 4098 GKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD 4157
Query: 522 KD-RSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPT 580
R V+G L+ + V I++GS H + G VYTWG N GQLG G + + P
Sbjct: 4158 DHVRRPRQVQG-LQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQRPR 4216
Query: 581 FVEALRDRQVESVVCGSSITAAICLHKSISVG 612
V AL+ ++V V CGS+ T A K S G
Sbjct: 4217 LVAALQGKKVNRVACGSAHTLAWSTSKPASAG 4248
Score = 460 (167.0 bits), Expect = 7.8e-37, Sum P(2) = 7.8e-37
Identities = 117/355 (32%), Positives = 182/355 (51%)
Query: 252 LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMD-VSCPKLVEC 310
+P E+ L+V ++ G+K VT EG+V+ GE +GRLG ++ V P+ +
Sbjct: 2903 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITA 2962
Query: 311 LSGINVQSVSC--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
LS V+ V+ G ALT G++++WG + G +G SR + +L + L
Sbjct: 2963 LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK--LGHF-SRMNCDKPRLIEALKT 3019
Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
R+ +ACG H+A +++SG+L+T+G G +G LGHG+ +PK V+ L G +V VAC
Sbjct: 3020 KRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 3079
Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ 488
G + + D G +F+WGD D G+LG E +P + RL Q
Sbjct: 3080 GSRDAQTLA--LTDE-------GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQ 3130
Query: 489 ASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK-AKDRSITVVEGKLKEEFVKGISSGSYH 547
CG ++ LT G V+T G + +LG+ R VVEG L+ + + ++ G+ H
Sbjct: 3131 IECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALH 3189
Query: 548 VAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
+T G VY WG N +GQ G G + PT V+ L +++ V CGSS + A
Sbjct: 3190 CLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3244
Score = 416 (151.5 bits), Expect = 4.5e-32, Sum P(2) = 4.5e-32
Identities = 104/325 (32%), Positives = 164/325 (50%)
Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISL--GAKHAALVTKEGEVFCWGEGKD 291
G A +G + + +P+ + + V+ +++ G +HA +T +G+VF WGEG D
Sbjct: 2938 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 2997
Query: 292 GRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER 351
G+LGH M+ P+L+E L ++ ++CG + ALT SGE+YTWG +G +G
Sbjct: 2998 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR--LGHG 3055
Query: 352 RSRSHWLPRKLFDTLDGVRVSKVACG--EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV 409
+ + P K+ L G RV +VACG + T ++ G +F++GDG FG LG G +
Sbjct: 3056 DNTTQLKP-KMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 3114
Query: 410 SQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDG 469
+ P+ +E L G V + CG + A+ KS G ++TWG D RLGH
Sbjct: 3115 NIPQNIERLNGQGVCQIECGAQFSLALT-------KS----GVVWTWGKGDYFRLGHGSD 3163
Query: 470 ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAK-DRSITV 528
P V L V + G + + +T G+VY G HGQ GN +R T+
Sbjct: 3164 VHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTL 3223
Query: 529 VEGKLKEEFVKGISSGSYHVAVLTS 553
V+G L+ + + ++ GS H T+
Sbjct: 3224 VQG-LEGQKITRVACGSSHSVAWTT 3247
Score = 375 (137.1 bits), Expect = 1.2e-27, Sum P(2) = 1.2e-27
Identities = 102/338 (30%), Positives = 163/338 (48%)
Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
++ + G + AA + + VF WG +LG + P E LS +NV V+ G
Sbjct: 2865 IRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 2922
Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC--GEWHT 381
A+T G++Y G +G +G S + +PR++ L V KVA G H
Sbjct: 2923 KSLFAVTVEGKVYACGEATNGRLGLGIS-SGTVPIPRQI-TALSSYVVKKVAVHSGGRHA 2980
Query: 382 AIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMV 441
++ G++F++G+G G LGH + N +P+ +E+L+ +++ +ACG H+AA+
Sbjct: 2981 TALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTS--- 3037
Query: 442 DRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRM--LTVGL 499
G+L+TWG + GRLGH D +L P V L+ +Q +CG T+ L
Sbjct: 3038 --------SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3089
Query: 500 TGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYT 559
T G V++ G G+LG ++ +I +L + V I G+ LT G V+T
Sbjct: 3090 TDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWT 3149
Query: 560 WGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGS 597
WGK +LG G P VE LR +++ V G+
Sbjct: 3150 WGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGA 3187
Score = 375 (137.1 bits), Expect = 4.6e-26, Sum P(3) = 4.6e-26
Identities = 125/412 (30%), Positives = 183/412 (44%)
Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
G ++ WG G+LG V P E L+ + + GE A+T G++Y G+
Sbjct: 3875 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATGY 3934
Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC--GEWHTAIVSTSGQLFTYGDGTF 398
G VG S S P L +++ V + KVA G H +S+ G+++++G+
Sbjct: 3935 GAGGRLGVGGTESVS--TPT-LLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 3991
Query: 399 GVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
G LGHGN +P+ +ESLRG +V VA G H+A C + A G L+TWG
Sbjct: 3992 GKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSA---------CVTAA--GDLYTWGK 4040
Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAVHGQL 516
GRLGH D E +L P V L V +CG T+ LT V++ G +G+L
Sbjct: 4041 GRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKL 4100
Query: 517 GNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQER 576
G + + + L V + GS LT G+VYTWGK +LG G
Sbjct: 4101 GRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV 4160
Query: 577 ETPTFVEALRDRQVESVVCGSSITAAICLHKSISV---GDQ----------SSCSQCRMP 623
P V+ L+ ++V ++ GS +C + V GD ++ + R+
Sbjct: 4161 RRPRQVQGLQGKKVIAIATGS--LHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4218
Query: 624 FGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKI 675
+ KK N CG A ST K +A P + P YNHLQ+I
Sbjct: 4219 AALQGKKVNRVACGSAHTLAWSTSKPASAGKLPVQ-VPME-----YNHLQEI 4264
Score = 349 (127.9 bits), Expect = 4.4e-23, Sum P(3) = 4.4e-23
Identities = 106/391 (27%), Positives = 177/391 (45%)
Query: 245 KTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC 304
K + + P E L V I+ K ++++ G V+ N D
Sbjct: 345 KYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLA 394
Query: 305 PKLVECLSGINVQSVSCGE--FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL 362
P+LV+ L+ N+ ++ AL +GE+Y+WG + G +G + P K+
Sbjct: 395 PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGR--LGHGDTVPLEEP-KV 451
Query: 363 FDTLDGVRVSK----VACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESL 418
G + K +ACG ++A ++ G+L+T+G G +G LGHG+ ++ + P V L
Sbjct: 452 ISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL 511
Query: 419 RGLKVKSVACGPW--HTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPT 476
+GLKV VACG T A+ + G++++WGD D G+LG + P
Sbjct: 512 KGLKVIDVACGSGDAQTLAVTE-----------NGQVWSWGDGDYGKLGRGGSDGCKTPK 560
Query: 477 CVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD-RSITVVEGKLKE 535
+ +L D D V+ CG +V LT G+VY+ G + +LG+ + R ++EG L+
Sbjct: 561 LIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG-LQG 619
Query: 536 EFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVC 595
+ V +++GS H LT V++WG N Q + P+ + L + + + C
Sbjct: 620 KKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPSALPGLDTKHIVGIAC 679
Query: 596 G--SSITAAICLHKSISVGDQSSCSQCRMPF 624
G S + C SI + C M F
Sbjct: 680 GPAQSFAWSSCSEWSIGLRVPFVVDICSMTF 710
Score = 272 (100.8 bits), Expect = 3.0e-16, Sum P(3) = 3.0e-16
Identities = 79/274 (28%), Positives = 131/274 (47%)
Query: 332 SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
SG IY WGHN+ G L G ++ +P + L +R ++ GE V+ G+L+
Sbjct: 3874 SGTIYGWGHNHRG-QLGGIEGAKVK-VPTPC-EALAALRPVQLIGGEQTLFAVTADGKLY 3930
Query: 392 TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
G G G LG G ++VS P +ES++ + +K VA V+ C + + G
Sbjct: 3931 ATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVA---------VNSGGKHCLALSSEG 3981
Query: 452 KLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
++++WG+A+ G+LGH + P + L + V + G + +T G +YT G
Sbjct: 3982 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKG 4041
Query: 512 VHGQLGNPKAKDR-SITVVEGKLKEEFVK-GISSGSYHVAVLTSGGSVYTWGKNANGQLG 569
+G+LG+ ++D+ +VE V SG LT +V++WG G+LG
Sbjct: 4042 RYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4101
Query: 570 LGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
G S + P +++L V V CGS + A+
Sbjct: 4102 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4135
Score = 239 (89.2 bits), Expect = 1.8e-11, Sum P(3) = 1.8e-11
Identities = 85/332 (25%), Positives = 154/332 (46%)
Query: 292 GRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER 351
G +G K +V P E L+ + V ++C E + L+++G +YT +N+ D + +
Sbjct: 340 GLIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNS---DTLAPQ 396
Query: 352 RSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQ 411
+ R + V+++ + G + A+ +T G+++++G G G LGHG+ + +
Sbjct: 397 LVQG-LASRNI------VKIAAHSDGHHYLALAAT-GEVYSWGCGDGGRLGHGDTVPLEE 448
Query: 412 PKEVESLRGLK----VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHV 467
PK + + G + V +ACG ++AAI G+L D+ V
Sbjct: 449 PKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 508
Query: 468 DGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD-RSI 526
G + L +++D V G T+ +T G+V++ G +G+LG + ++
Sbjct: 509 AGLKGL------KVID---VACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTP 559
Query: 527 TVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALR 586
++E KL++ V + GS LT G VY+WGK N +LG G + P +E L+
Sbjct: 560 KLIE-KLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQ 618
Query: 587 DRQVESVVCGSSITAAICLHKSI-SVGDQSSC 617
++V V GS+ A+ + S G C
Sbjct: 619 GKKVIDVAAGSTHCLALTEDSEVHSWGSNDQC 650
Score = 227 (85.0 bits), Expect = 2.0e-10, Sum P(3) = 2.0e-10
Identities = 60/190 (31%), Positives = 92/190 (48%)
Query: 198 ESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLE 257
+ HR+V GS + + D +W G GD G G K +P ++
Sbjct: 4064 QGHRVVDVACGSGDAQTLCLTDDDTVWSWG--DGDYGKLGRGGSDGCK------VPMKID 4115
Query: 258 SAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQ 317
S L V + G++ + +TK G V+ WG+G RLGH + V P+ V+ L G V
Sbjct: 4116 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4175
Query: 318 SVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
+++ G ++ GE+YTWG N+ G +G+ + + PR L L G +V++VACG
Sbjct: 4176 AIATGSLHCVCCSEDGEVYTWGDNDEGQ--LGDGTTNAIQRPR-LVAALQGKKVNRVACG 4232
Query: 378 EWHTAIVSTS 387
HT STS
Sbjct: 4233 SAHTLAWSTS 4242
Score = 222 (83.2 bits), Expect = 2.8e-26, Sum P(3) = 2.8e-26
Identities = 73/232 (31%), Positives = 105/232 (45%)
Query: 378 EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
+W T SG ++ +G G LG V P E+L L+ + G A+
Sbjct: 3866 DW-TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVT 3924
Query: 438 DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRL--VDFDFVQASCGRML 495
D GKL+ G GRLG E PT + + V V + G
Sbjct: 3925 ---AD--------GKLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKH 3973
Query: 496 TVGLTGLGKVYTMGSAVHGQLG--NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTS 553
+ L+ G+VY+ G A G+LG N DR V+E L+ V +++G H A +T+
Sbjct: 3974 CLALSSEGEVYSWGEAEDGKLGHGNRSPCDRP-RVIES-LRGTEVVDVAAGGAHSACVTA 4031
Query: 554 GGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
G +YTWGK G+LG DS+++ P VEAL+ +V V CGS +CL
Sbjct: 4032 AGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCL 4083
Score = 207 (77.9 bits), Expect = 1.1e-24, Sum P(3) = 1.1e-24
Identities = 84/301 (27%), Positives = 127/301 (42%)
Query: 368 GVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVA 427
G + K A G A + T ++F +G LG + P E+L L V VA
Sbjct: 2862 GSLIRKKAAGLESAATIRT--KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVA 2919
Query: 428 CGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG-HVDGERKLLPTCVTRLVDFDF 486
G + ++ + V+ GK++ G+A GRLG + +P +T L +
Sbjct: 2920 GG---SKSLFAVTVE--------GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVV 2968
Query: 487 VQA---SCGRMLTVGLTGLGKVYTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGIS 542
+ S GR T LT GKV++ G G+LG+ + ++E LK + ++ I+
Sbjct: 2969 KKVAVHSGGRHATA-LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIA 3026
Query: 543 SGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
GS H A LTS G +YTWG G+LG GD+ + P V+ L +V V CGS
Sbjct: 3027 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQT 3086
Query: 603 ICLHKS---ISVGD-------QSSCSQCRMPFGFRRKKHN--CY-NCGLHFCSACSTKKI 649
+ L S GD + C +P R C CG F A + +
Sbjct: 3087 LALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGV 3146
Query: 650 I 650
+
Sbjct: 3147 V 3147
Score = 199 (75.1 bits), Expect = 2.8e-26, Sum P(3) = 2.8e-26
Identities = 55/158 (34%), Positives = 79/158 (50%)
Query: 221 VMIWGEGVLGGDIG-GAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
V WG+G G +G G DG KT PKL+E LDV + G++ + +TK
Sbjct: 537 VWSWGDGDYG-KLGRGGSDGC----KT------PKLIEKLQDLDVVKVRCGSQFSVALTK 585
Query: 280 EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
+G+V+ WG+G + RLGH V PKL+E L G V V+ G ALT+ E+++WG
Sbjct: 586 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 645
Query: 340 HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
N+ R ++ P L LD + +ACG
Sbjct: 646 SNDQCQHFDTLRVTKPE--PSAL-PGLDTKHIVGIACG 680
Score = 96 (38.9 bits), Expect = 2.8e-13, Sum P(3) = 2.8e-13
Identities = 43/178 (24%), Positives = 72/178 (40%)
Query: 428 CGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFV 487
C +H ++I + +C+S+ I K+ G GR+ + + +P + + +
Sbjct: 2802 CTEYHR--YIEIAIKQCRSSGIDCKIH--GLILLGRIRAEEEDMAAVPFLASDNEEEEDE 2857
Query: 488 QASCGRMLTVGLTGLG-------KVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKG 540
+ + G ++ GL KV+ G QLG K + L V
Sbjct: 2858 KGNSGSLIRKKAAGLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQ 2917
Query: 541 ISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQER-ETPTFVEALRDRQVESVVCGS 597
++ GS + +T G VY G+ NG+LGLG S P + AL V+ V S
Sbjct: 2918 VAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHS 2975
Score = 50 (22.7 bits), Expect = 3.0e-16, Sum P(3) = 3.0e-16
Identities = 26/95 (27%), Positives = 45/95 (47%)
Query: 251 LLPKLLESAVMLD-VQNI-SLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLV 308
LL +L + V L+ + I L AK+ L + + +FC + RL + +D+ P L
Sbjct: 1574 LLKQLERAEVRLEGIDTILKLAAKNFLLPSVQYAMFCGWQ----RLIPE-GIDIGEP-LT 1627
Query: 309 ECLSGINVQSVSCGEFQTCALTKS-GEIYTWGHNN 342
+CL +++ F L + G++YTW N
Sbjct: 1628 DCLKDVDL----IPPFNRMLLEVTFGKLYTWAVQN 1658
Score = 40 (19.1 bits), Expect = 7.8e-37, Sum P(2) = 7.8e-37
Identities = 18/61 (29%), Positives = 32/61 (52%)
Query: 868 RLHTLSEKISAAKEAKEGVDANLPPKLDTDKHPEVKLPKDRKVDSL-CSSPIVFSNKLKS 926
RLH E+++A +E G+ A + P P + L +++++ C SP + + LKS
Sbjct: 4561 RLHEFDEQVAAVRE---GM-ARVVPV------PLLSLFTGYELETMVCGSPDIPLHLLKS 4610
Query: 927 V 927
V
Sbjct: 4611 V 4611
Score = 40 (19.1 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 26/99 (26%), Positives = 44/99 (44%)
Query: 464 LGHVDGERKLLPTCVTRLVDFDFVQAS-CGR-------MLTVGLTGLGKVYTMGSAVHGQ 515
L +D LL TR++ D ++ S CGR +L+ L+G+G Y + + +
Sbjct: 3454 LQSLDEFTSLLVVDDTRVL-VDLLKLSVCGRAGDKGRDVLSAVLSGMGTAYPQVADMLLE 3512
Query: 516 LGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSG 554
L + +D + G+L + V SS Y +SG
Sbjct: 3513 LCVTELEDVATDSQSGRLSSQPVVVESSHPYTDDTSSSG 3551
Score = 39 (18.8 bits), Expect = 8.3e-36, Sum P(3) = 8.3e-36
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 11 GQKEKQLRLNSVTKIIMGQRTVNFQC 36
G QL+ V K+++G R + C
Sbjct: 3055 GDNTTQLKPKMV-KVLLGHRVIQVAC 3079
Score = 37 (18.1 bits), Expect = 1.7e-35, Sum P(3) = 1.7e-35
Identities = 8/25 (32%), Positives = 13/25 (52%)
Query: 638 LHFCSACSTKKIINASLTPNKGKPS 662
+HFC + T +LT G+P+
Sbjct: 4708 IHFCKSIDTDDYARIALT---GEPA 4729
Score = 37 (18.1 bits), Expect = 4.4e-23, Sum P(3) = 4.4e-23
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 723 SRNVERKPGECLESASSLSSGLQRWG 748
S ++ RK LESA+++ + + WG
Sbjct: 2861 SGSLIRKKAAGLESAATIRTKVFVWG 2886
Score = 37 (18.1 bits), Expect = 6.5e-15, Sum P(3) = 6.5e-15
Identities = 11/56 (19%), Positives = 27/56 (48%)
Query: 303 SCPKLVECLSGINVQ-SVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHW 357
S P ++ + V+ SV+ +++ ++T + +G D++ + +SHW
Sbjct: 2555 SSPSHIKIGDKVRVKASVTTPKYKWGSVTHQSVGVVKAFSANGKDVIVDFPQQSHW 2610
>UNIPROTKB|O95714 [details] [associations]
symbol:HERC2 "E3 ubiquitin-protein ligase HERC2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0020037 "heme binding" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=NAS] [GO:0006886 "intracellular protein transport"
evidence=NAS] [GO:0006281 "DNA repair" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IPI] [GO:0032183 "SUMO binding"
evidence=IDA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS00191 PROSITE:PS01357 PROSITE:PS50082
PROSITE:PS50135 PROSITE:PS50237 PROSITE:PS50255 PROSITE:PS50294
PROSITE:PS51416 SMART:SM00119 SMART:SM00291 UniPathway:UPA00143
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
Reactome:REACT_6900 GO:GO:0006886 GO:GO:0005814 PROSITE:PS00678
GO:GO:0005743 GO:GO:0046872 GO:GO:0008270 GO:GO:0006281
GO:GO:0007283 GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0005085 Gene3D:3.10.120.10 SUPFAM:SSF55856
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939
Pfam:PF03256 PROSITE:PS51284 GO:GO:0042787 GO:GO:0032183
Gene3D:2.30.30.30 InterPro:IPR021097 InterPro:IPR014722
Pfam:PF11515 SUPFAM:SSF56204 eggNOG:COG5021 CTD:8924 KO:K10595
OMA:QLAFTRD EMBL:AF071172 EMBL:AC091304 EMBL:AC126332 EMBL:AC135329
EMBL:AF224243 EMBL:AF224242 EMBL:AF224245 EMBL:AF224244
EMBL:AF224249 EMBL:AF224246 EMBL:AF224247 EMBL:AF224248
EMBL:AF224251 EMBL:AF224250 EMBL:AF224255 EMBL:AF224254
EMBL:AF224252 EMBL:AF224253 EMBL:AF224257 EMBL:AF224256
EMBL:AF225401 EMBL:AF225400 EMBL:AF225404 EMBL:AF225402
EMBL:AF225403 EMBL:AF225407 EMBL:AF225405 EMBL:AF225406
EMBL:AF225409 EMBL:AF225408 IPI:IPI00005826 RefSeq:NP_004658.3
UniGene:Hs.434890 UniGene:Hs.610412 UniGene:Hs.741019 PDB:2KEO
PDB:3KCI PDBsum:2KEO PDBsum:3KCI ProteinModelPortal:O95714
SMR:O95714 DIP:DIP-37632N IntAct:O95714 STRING:O95714
PhosphoSite:O95714 PaxDb:O95714 PRIDE:O95714
Ensembl:ENST00000261609 GeneID:8924 KEGG:hsa:8924 UCSC:uc001zbj.3
GeneCards:GC15M028356 H-InvDB:HIX0012044 H-InvDB:HIX0017540
H-InvDB:HIX0038121 H-InvDB:HIX0038320 H-InvDB:HIX0038830
H-InvDB:HIX0173226 H-InvDB:HIX0173299 H-InvDB:HIX0194348
HGNC:HGNC:4868 HPA:CAB017188 MIM:227220 MIM:605837
neXtProt:NX_O95714 PharmGKB:PA29243 HOVERGEN:HBG081598
InParanoid:O95714 OrthoDB:EOG41C6V9 PhylomeDB:O95714
EvolutionaryTrace:O95714 GenomeRNAi:8924 NextBio:33552
ArrayExpress:O95714 Bgee:O95714 Genevestigator:O95714
GermOnline:ENSG00000128731 InterPro:IPR006624 SMART:SM00706
Uniprot:O95714
Length = 4834
Score = 471 (170.9 bits), Expect = 1.9e-36, Sum P(3) = 1.9e-36
Identities = 129/392 (32%), Positives = 195/392 (49%)
Query: 224 WGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEV 283
WG G +GG ++G+ + T +AL A + VQ I G + VT +G++
Sbjct: 3957 WGHNHRG-QLGG-IEGAKVKVPTPCEAL-------ATLRPVQLIG-GEQTLFAVTADGKL 4006
Query: 284 FCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGHN 341
+ G G GRLG VS P L+E + + ++ +V+ G AL+ GE+Y+WG
Sbjct: 4007 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEA 4066
Query: 342 NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVL 401
G G R PR + ++L G+ V VA G H+A V+ +G L+T+G G +G L
Sbjct: 4067 EDGKLGHGNRSPCDR--PR-VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4123
Query: 402 GHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADK 461
GH + ++ +PK VE+L+G +V +ACG + C ++ +++WGD D
Sbjct: 4124 GHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTL-------CLTD--DDTVWSWGDGDY 4174
Query: 462 GRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA 521
G+LG + +P + L V+ CG +V LT G VYT G + +LG+
Sbjct: 4175 GKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD 4234
Query: 522 KD-RSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPT 580
R V+G L+ + V I++GS H T G VYTWG N GQLG G + + P
Sbjct: 4235 DHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPR 4293
Query: 581 FVEALRDRQVESVVCGSSITAAICLHKSISVG 612
V AL+ ++V V CGS+ T A K S G
Sbjct: 4294 LVAALQGKKVNRVACGSAHTLAWSTSKPASAG 4325
Score = 460 (167.0 bits), Expect = 8.1e-37, Sum P(2) = 8.1e-37
Identities = 117/355 (32%), Positives = 182/355 (51%)
Query: 252 LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMD-VSCPKLVEC 310
+P E+ L+V ++ G+K VT EG+V+ GE +GRLG ++ V P+ +
Sbjct: 2982 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITA 3041
Query: 311 LSGINVQSVSC--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
LS V+ V+ G ALT G++++WG + G +G SR + +L + L
Sbjct: 3042 LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK--LGHF-SRMNCDKPRLIEALKT 3098
Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
R+ +ACG H+A +++SG+L+T+G G +G LGHG+ +PK V+ L G +V VAC
Sbjct: 3099 KRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 3158
Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ 488
G + + D G +F+WGD D G+LG E +P + RL Q
Sbjct: 3159 GSRDAQTLA--LTDE-------GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQ 3209
Query: 489 ASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK-AKDRSITVVEGKLKEEFVKGISSGSYH 547
CG ++ LT G V+T G + +LG+ R VVEG L+ + + ++ G+ H
Sbjct: 3210 IECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALH 3268
Query: 548 VAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
+T G VY WG N +GQ G G + PT V+ L +++ V CGSS + A
Sbjct: 3269 CLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3323
Score = 415 (151.1 bits), Expect = 6.0e-32, Sum P(2) = 6.0e-32
Identities = 104/325 (32%), Positives = 164/325 (50%)
Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISL--GAKHAALVTKEGEVFCWGEGKD 291
G A +G + + +P+ + + V+ +++ G +HA +T +G+VF WGEG D
Sbjct: 3017 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3076
Query: 292 GRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER 351
G+LGH M+ P+L+E L ++ ++CG + ALT SGE+YTWG +G +G
Sbjct: 3077 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR--LGHG 3134
Query: 352 RSRSHWLPRKLFDTLDGVRVSKVACG--EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV 409
+ + P K+ L G RV +VACG + T ++ G +F++GDG FG LG G +
Sbjct: 3135 DNTTQLKP-KMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 3193
Query: 410 SQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDG 469
+ P+ +E L G V + CG + A+ KS G ++TWG D RLGH
Sbjct: 3194 NIPQNIERLNGQGVCQIECGAQFSLALT-------KS----GVVWTWGKGDYFRLGHGSD 3242
Query: 470 ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAK-DRSITV 528
P V L V + G + + +T G+VY G HGQ GN +R T+
Sbjct: 3243 VHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTL 3302
Query: 529 VEGKLKEEFVKGISSGSYHVAVLTS 553
V+G L+ + + ++ GS H T+
Sbjct: 3303 VQG-LEGQKITRVACGSSHSVAWTT 3326
Score = 388 (141.6 bits), Expect = 1.9e-27, Sum P(3) = 1.9e-27
Identities = 108/344 (31%), Positives = 166/344 (48%)
Query: 253 PKLLESAVMLDVQNISL--GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVEC 310
P LLES + ++ +++ G KH ++ EGEV+ WGE +DG+LGH P+++E
Sbjct: 4028 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4087
Query: 311 LSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR 370
L GI V V+ G + +T +G++YTWG +G +G S P KL + L G R
Sbjct: 4088 LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR--LGHSDSEDQLKP-KLVEALQGHR 4144
Query: 371 VSKVACG--EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
V +ACG + T ++ ++++GDG +G LG G P +++SL GL V V C
Sbjct: 4145 VVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC 4204
Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ 488
G + A+ KS A+ +TWG D RLGH + P V L +
Sbjct: 4205 GSQFSVALT-------KSGAV----YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIA 4253
Query: 489 ASCGRMLTVGLTGLGKVYTMGSAVHGQLG----NPKAKDRSITVVEGKLKEEFVKGISSG 544
+ G + V T G+VYT G GQLG N + R + ++GK V ++ G
Sbjct: 4254 IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKK----VNRVACG 4309
Query: 545 SYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDR 588
S H ++ GK Q+ + + +E P + ALR+R
Sbjct: 4310 SAHTLAWSTSKPASA-GK-LPAQVPMEYNHLQEIP--IIALRNR 4349
Score = 376 (137.4 bits), Expect = 3.8e-26, Sum P(3) = 3.8e-26
Identities = 131/445 (29%), Positives = 195/445 (43%)
Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
G ++ WG G+LG V P E L+ + + GE A+T G++Y G+
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4011
Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC--GEWHTAIVSTSGQLFTYGDGTF 398
G +G S S P L +++ V + KVA G H +S+ G+++++G+
Sbjct: 4012 GAGGRLGIGGTESVS--TPT-LLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4068
Query: 399 GVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
G LGHGN +P+ +ESLRG++V VA G H+A C + A G L+TWG
Sbjct: 4069 GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSA---------CVTAA--GDLYTWGK 4117
Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAVHGQL 516
GRLGH D E +L P V L V +CG T+ LT V++ G +G+L
Sbjct: 4118 GRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKL 4177
Query: 517 GNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQER 576
G + + + L V + GS LT G+VYTWGK +LG G
Sbjct: 4178 GRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV 4237
Query: 577 ETPTFVEALRDRQVESVVCGSSITAAICLHKS------------ISVGDQSSCSQCRMPF 624
P V+ L+ ++V ++ GS + C + G ++ + R+
Sbjct: 4238 RRPRQVQGLQGKKVIAIATGS-LHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVA 4296
Query: 625 GFRRKKHNCYNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKI---THSGRL 681
+ KK N CG A ST K +A P + P YNHLQ+I RL
Sbjct: 4297 ALQGKKVNRVACGSAHTLAWSTSKPASAGKLPAQ-VPME-----YNHLQEIPIIALRNRL 4350
Query: 682 LKQENQSPR-----NLLNLQGSLSE 701
L + S + +L+GSL E
Sbjct: 4351 LLLHHLSELFCPCIPMFDLEGSLDE 4375
Score = 375 (137.1 bits), Expect = 1.2e-27, Sum P(2) = 1.2e-27
Identities = 102/338 (30%), Positives = 163/338 (48%)
Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
++ + G + AA + + VF WG +LG + P E LS +NV V+ G
Sbjct: 2944 IRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 3001
Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC--GEWHT 381
A+T G++Y G +G +G S + +PR++ L V KVA G H
Sbjct: 3002 KSLFAVTVEGKVYACGEATNGRLGLGIS-SGTVPIPRQI-TALSSYVVKKVAVHSGGRHA 3059
Query: 382 AIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMV 441
++ G++F++G+G G LGH + N +P+ +E+L+ +++ +ACG H+AA+
Sbjct: 3060 TALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTS--- 3116
Query: 442 DRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRM--LTVGL 499
G+L+TWG + GRLGH D +L P V L+ +Q +CG T+ L
Sbjct: 3117 --------SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3168
Query: 500 TGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYT 559
T G V++ G G+LG ++ +I +L + V I G+ LT G V+T
Sbjct: 3169 TDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWT 3228
Query: 560 WGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGS 597
WGK +LG G P VE LR +++ V G+
Sbjct: 3229 WGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGA 3266
Score = 347 (127.2 bits), Expect = 7.7e-23, Sum P(3) = 7.7e-23
Identities = 105/391 (26%), Positives = 176/391 (45%)
Query: 245 KTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC 304
K + + P E L V I+ K ++++ G V+ N D
Sbjct: 434 KYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLA 483
Query: 305 PKLVECLSGINVQSVSCGE--FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL 362
P+LV+ L+ N+ ++ AL +GE+Y+WG + G +G + P K+
Sbjct: 484 PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGR--LGHGDTVPLEEP-KV 540
Query: 363 FDTLDGVRVSK----VACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESL 418
G + K +ACG ++A ++ G+L+T+G G +G LGHG+ ++ + P V L
Sbjct: 541 ISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL 600
Query: 419 RGLKVKSVACGPW--HTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPT 476
+GLKV VACG T A+ + G++++WGD D G+LG + P
Sbjct: 601 KGLKVIDVACGSGDAQTLAVTE-----------NGQVWSWGDGDYGKLGRGGSDGCKTPK 649
Query: 477 CVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD-RSITVVEGKLKE 535
+ +L D D V+ CG ++ LT G+VY+ G + +LG+ + R ++EG L+
Sbjct: 650 LIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG-LQG 708
Query: 536 EFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVC 595
+ V +++GS H LT V++WG N Q + P + L + + + C
Sbjct: 709 KKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIAC 768
Query: 596 G--SSITAAICLHKSISVGDQSSCSQCRMPF 624
G S + C SI + C M F
Sbjct: 769 GPAQSFAWSSCSEWSIGLRVPFVVDICSMTF 799
Score = 272 (100.8 bits), Expect = 4.2e-15, Sum P(3) = 4.2e-15
Identities = 79/274 (28%), Positives = 133/274 (48%)
Query: 332 SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
SG IY WGHN+ G L G ++ +P + L +R ++ GE V+ G+L+
Sbjct: 3951 SGTIYGWGHNHRG-QLGGIEGAKVK-VPTPC-EALATLRPVQLIGGEQTLFAVTADGKLY 4007
Query: 392 TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
G G G LG G ++VS P +ES++ + +K VA V+ C + + G
Sbjct: 4008 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVA---------VNSGGKHCLALSSEG 4058
Query: 452 KLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
++++WG+A+ G+LGH + P + L + V + G + +T G +YT G
Sbjct: 4059 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4118
Query: 512 VHGQLGNPKAKDRSITVVEGKLKEEFVKGIS--SGSYHVAVLTSGGSVYTWGKNANGQLG 569
+G+LG+ ++D+ + L+ V I+ SG LT +V++WG G+LG
Sbjct: 4119 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4178
Query: 570 LGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
G S + P +++L V V CGS + A+
Sbjct: 4179 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4212
Score = 238 (88.8 bits), Expect = 2.4e-11, Sum P(3) = 2.4e-11
Identities = 85/332 (25%), Positives = 154/332 (46%)
Query: 292 GRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER 351
G +G K +V P E L+ + V ++C E + L+++G +YT +N+ D + +
Sbjct: 429 GLIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNS---DTLAPQ 485
Query: 352 RSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQ 411
+ R + V+++ + G + A+ +T G+++++G G G LGHG+ + +
Sbjct: 486 LVQG-LASRNI------VKIAAHSDGHHYLALAAT-GEVYSWGCGDGGRLGHGDTVPLEE 537
Query: 412 PKEVESLRGLK----VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHV 467
PK + + G + V +ACG ++AAI G+L D+ V
Sbjct: 538 PKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 597
Query: 468 DGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD-RSI 526
G + L +++D V G T+ +T G+V++ G +G+LG + ++
Sbjct: 598 AGLKGL------KVID---VACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTP 648
Query: 527 TVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALR 586
++E KL++ V + GS LT G VY+WGK N +LG G + P +E L+
Sbjct: 649 KLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQ 707
Query: 587 DRQVESVVCGSSITAAICLHKSI-SVGDQSSC 617
++V V GS+ A+ + S G C
Sbjct: 708 GKKVIDVAAGSTHCLALTEDSEVHSWGSNDQC 739
Score = 230 (86.0 bits), Expect = 1.0e-10, Sum P(3) = 1.0e-10
Identities = 61/190 (32%), Positives = 92/190 (48%)
Query: 198 ESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLE 257
+ HR+V GS + + D +W G GD G G K +P ++
Sbjct: 4141 QGHRVVDIACGSGDAQTLCLTDDDTVWSWG--DGDYGKLGRGGSDGCK------VPMKID 4192
Query: 258 SAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQ 317
S L V + G++ + +TK G V+ WG+G RLGH + V P+ V+ L G V
Sbjct: 4193 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4252
Query: 318 SVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
+++ G T+ GE+YTWG N+ G +G+ + + PR L L G +V++VACG
Sbjct: 4253 AIATGSLHCVCCTEDGEVYTWGDNDEGQ--LGDGTTNAIQRPR-LVAALQGKKVNRVACG 4309
Query: 378 EWHTAIVSTS 387
HT STS
Sbjct: 4310 SAHTLAWSTS 4319
Score = 217 (81.4 bits), Expect = 1.3e-25, Sum P(3) = 1.3e-25
Identities = 72/232 (31%), Positives = 105/232 (45%)
Query: 378 EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
+W T SG ++ +G G LG V P E+L L+ + G A+
Sbjct: 3943 DW-TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4001
Query: 438 DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRL--VDFDFVQASCGRML 495
D GKL+ G GRLG E PT + + V V + G
Sbjct: 4002 ---AD--------GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKH 4050
Query: 496 TVGLTGLGKVYTMGSAVHGQLG--NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTS 553
+ L+ G+VY+ G A G+LG N DR V+E L+ V +++G H A +T+
Sbjct: 4051 CLALSSEGEVYSWGEAEDGKLGHGNRSPCDRP-RVIES-LRGIEVVDVAAGGAHSACVTA 4108
Query: 554 GGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
G +YTWGK G+LG DS+++ P VEAL+ +V + CGS +CL
Sbjct: 4109 AGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCL 4160
Score = 207 (77.9 bits), Expect = 1.5e-24, Sum P(3) = 1.5e-24
Identities = 84/301 (27%), Positives = 127/301 (42%)
Query: 368 GVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVA 427
G + K A G A + T ++F +G LG + P E+L L V VA
Sbjct: 2941 GSLIRKKAAGLESAATIRT--KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVA 2998
Query: 428 CGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG-HVDGERKLLPTCVTRLVDFDF 486
G + ++ + V+ GK++ G+A GRLG + +P +T L +
Sbjct: 2999 GG---SKSLFAVTVE--------GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVV 3047
Query: 487 VQA---SCGRMLTVGLTGLGKVYTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGIS 542
+ S GR T LT GKV++ G G+LG+ + ++E LK + ++ I+
Sbjct: 3048 KKVAVHSGGRHATA-LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIA 3105
Query: 543 SGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
GS H A LTS G +YTWG G+LG GD+ + P V+ L +V V CGS
Sbjct: 3106 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQT 3165
Query: 603 ICLHKS---ISVGD-------QSSCSQCRMPFGFRRKKHN--CY-NCGLHFCSACSTKKI 649
+ L S GD + C +P R C CG F A + +
Sbjct: 3166 LALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGV 3225
Query: 650 I 650
+
Sbjct: 3226 V 3226
Score = 198 (74.8 bits), Expect = 1.3e-25, Sum P(3) = 1.3e-25
Identities = 55/158 (34%), Positives = 79/158 (50%)
Query: 221 VMIWGEGVLGGDIG-GAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
V WG+G G +G G DG KT PKL+E LDV + G++ + +TK
Sbjct: 626 VWSWGDGDYG-KLGRGGSDGC----KT------PKLIEKLQDLDVVKVRCGSQFSIALTK 674
Query: 280 EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
+G+V+ WG+G + RLGH V PKL+E L G V V+ G ALT+ E+++WG
Sbjct: 675 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734
Query: 340 HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
N+ R ++ P L LD + +ACG
Sbjct: 735 SNDQCQHFDTLRVTKPE--PAAL-PGLDTKHIVGIACG 769
Score = 95 (38.5 bits), Expect = 4.7e-13, Sum P(3) = 4.7e-13
Identities = 43/178 (24%), Positives = 72/178 (40%)
Query: 428 CGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFV 487
C +H ++I + +C+S+ I K+ G GR+ + + +P + + +
Sbjct: 2881 CTEYHR--YIEIAIKQCRSSGIDCKIH--GLILLGRIRAEEEDLAAVPFLASDNEEEEDE 2936
Query: 488 QASCGRMLTVGLTGLG-------KVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKG 540
+ + G ++ GL KV+ G QLG K + L V
Sbjct: 2937 KGNSGSLIRKKAAGLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQ 2996
Query: 541 ISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQER-ETPTFVEALRDRQVESVVCGS 597
++ GS + +T G VY G+ NG+LGLG S P + AL V+ V S
Sbjct: 2997 VAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHS 3054
Score = 41 (19.5 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 18/64 (28%), Positives = 30/64 (46%)
Query: 492 GR-MLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAV 550
GR +L+ L+G+G Y + + +L + +D + G+L + V SS Y
Sbjct: 3565 GRDVLSAVLSGMGTAYPQVADMLLELCVTELEDVATDSQSGRLSSQPVVVESSHPYTDDT 3624
Query: 551 LTSG 554
TSG
Sbjct: 3625 STSG 3628
Score = 40 (19.1 bits), Expect = 8.1e-37, Sum P(2) = 8.1e-37
Identities = 18/61 (29%), Positives = 32/61 (52%)
Query: 868 RLHTLSEKISAAKEAKEGVDANLPPKLDTDKHPEVKLPKDRKVDSL-CSSPIVFSNKLKS 926
RLH E+++A +E G+ A + P P + L +++++ C SP + + LKS
Sbjct: 4638 RLHEFDEQVAAVRE---GM-ARVVPV------PLLSLFTGYELETMVCGSPDIPLHLLKS 4687
Query: 927 V 927
V
Sbjct: 4688 V 4688
Score = 39 (18.8 bits), Expect = 1.9e-36, Sum P(3) = 1.9e-36
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 11 GQKEKQLRLNSVTKIIMGQRTVNFQC 36
G QL+ V K+++G R + C
Sbjct: 3134 GDNTTQLKPKMV-KVLLGHRVIQVAC 3158
Score = 37 (18.1 bits), Expect = 4.0e-36, Sum P(3) = 4.0e-36
Identities = 8/25 (32%), Positives = 13/25 (52%)
Query: 638 LHFCSACSTKKIINASLTPNKGKPS 662
+HFC + T +LT G+P+
Sbjct: 4785 IHFCKSIDTDDYARIALT---GEPA 4806
Score = 37 (18.1 bits), Expect = 7.7e-23, Sum P(3) = 7.7e-23
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 723 SRNVERKPGECLESASSLSSGLQRWG 748
S ++ RK LESA+++ + + WG
Sbjct: 2940 SGSLIRKKAAGLESAATIRTKVFVWG 2965
>UNIPROTKB|E1B782 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0032183 "SUMO binding" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0020037 "heme
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005743
GO:GO:0046872 GO:GO:0008270 GO:GO:0006281 GO:GO:0007283
GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
Gene3D:2.30.30.30 InterPro:IPR021097 InterPro:IPR014722
Pfam:PF11515 SUPFAM:SSF56204 GeneTree:ENSGT00700000104208
OMA:QLAFTRD InterPro:IPR006624 SMART:SM00706 EMBL:DAAA02003804
EMBL:DAAA02003805 IPI:IPI00713038 Ensembl:ENSBTAT00000018496
Uniprot:E1B782
Length = 4847
Score = 465 (168.7 bits), Expect = 8.8e-36, Sum P(3) = 8.8e-36
Identities = 129/392 (32%), Positives = 194/392 (49%)
Query: 224 WGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEV 283
WG G +GG ++G+ + T +AL A + VQ I G + VT +G++
Sbjct: 3970 WGHNHRG-QLGG-IEGAKVKVPTPCEAL-------AALRPVQLIG-GEQTLFAVTADGKL 4019
Query: 284 FCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGHN 341
+ G G GRLG VS P L+E + + ++ +V+ G AL+ GE+Y+WG
Sbjct: 4020 YATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEA 4079
Query: 342 NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVL 401
G G R PR + ++L G V VA G H+A V+ +G L+T+G G +G L
Sbjct: 4080 EDGKLGHGNRSPCDR--PR-VIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4136
Query: 402 GHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADK 461
GH + ++ +PK VE+L+G +V VACG + C ++ +++WGD D
Sbjct: 4137 GHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTL-------CLTD--DDTVWSWGDGDY 4187
Query: 462 GRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA 521
G+LG + +P + L V+ CG +V LT G VYT G + +LG+
Sbjct: 4188 GKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD 4247
Query: 522 KD-RSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPT 580
R V+G L+ + V I++GS H + G VYTWG N GQLG G + + P
Sbjct: 4248 DHVRRPRQVQG-LQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQRPR 4306
Query: 581 FVEALRDRQVESVVCGSSITAAICLHKSISVG 612
V AL+ ++V V CGS+ T A K S G
Sbjct: 4307 LVAALQGKKVNRVACGSAHTLAWSTSKPASAG 4338
Score = 460 (167.0 bits), Expect = 8.2e-37, Sum P(2) = 8.2e-37
Identities = 117/355 (32%), Positives = 182/355 (51%)
Query: 252 LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMD-VSCPKLVEC 310
+P E+ L+V ++ G+K VT EG+V+ GE +GRLG ++ V P+ +
Sbjct: 2993 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITA 3052
Query: 311 LSGINVQSVSC--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
LS V+ V+ G ALT G++++WG + G +G SR + +L + L
Sbjct: 3053 LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK--LGHF-SRMNCDKPRLIEALKT 3109
Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
R+ +ACG H+A +++SG+L+T+G G +G LGHG+ +PK V+ L G +V VAC
Sbjct: 3110 KRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 3169
Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ 488
G + + D G +F+WGD D G+LG E +P + RL Q
Sbjct: 3170 GSRDAQTLA--LTDE-------GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQ 3220
Query: 489 ASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK-AKDRSITVVEGKLKEEFVKGISSGSYH 547
CG ++ LT G V+T G + +LG+ R VVEG L+ + + ++ G+ H
Sbjct: 3221 IECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALH 3279
Query: 548 VAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
+T G VY WG N +GQ G G + PT V+ L +++ V CGSS + A
Sbjct: 3280 CLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3334
Score = 416 (151.5 bits), Expect = 4.7e-32, Sum P(2) = 4.7e-32
Identities = 104/325 (32%), Positives = 164/325 (50%)
Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISL--GAKHAALVTKEGEVFCWGEGKD 291
G A +G + + +P+ + + V+ +++ G +HA +T +G+VF WGEG D
Sbjct: 3028 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3087
Query: 292 GRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER 351
G+LGH M+ P+L+E L ++ ++CG + ALT SGE+YTWG +G +G
Sbjct: 3088 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR--LGHG 3145
Query: 352 RSRSHWLPRKLFDTLDGVRVSKVACG--EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV 409
+ + P K+ L G RV +VACG + T ++ G +F++GDG FG LG G +
Sbjct: 3146 DNTTQLKP-KMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 3204
Query: 410 SQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDG 469
+ P+ +E L G V + CG + A+ KS G ++TWG D RLGH
Sbjct: 3205 NIPQNIERLNGQGVCQIECGAQFSLALT-------KS----GVVWTWGKGDYFRLGHGSD 3253
Query: 470 ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAK-DRSITV 528
P V L V + G + + +T G+VY G HGQ GN +R T+
Sbjct: 3254 VHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTL 3313
Query: 529 VEGKLKEEFVKGISSGSYHVAVLTS 553
V+G L+ + + ++ GS H T+
Sbjct: 3314 VQG-LEGQKITRVACGSSHSVAWTT 3337
Score = 375 (137.1 bits), Expect = 1.2e-27, Sum P(2) = 1.2e-27
Identities = 102/338 (30%), Positives = 163/338 (48%)
Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
++ + G + AA + + VF WG +LG + P E LS +NV V+ G
Sbjct: 2955 IRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 3012
Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC--GEWHT 381
A+T G++Y G +G +G S + +PR++ L V KVA G H
Sbjct: 3013 KSLFAVTVEGKVYACGEATNGRLGLGIS-SGTVPIPRQI-TALSSYVVKKVAVHSGGRHA 3070
Query: 382 AIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMV 441
++ G++F++G+G G LGH + N +P+ +E+L+ +++ +ACG H+AA+
Sbjct: 3071 TALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTS--- 3127
Query: 442 DRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRM--LTVGL 499
G+L+TWG + GRLGH D +L P V L+ +Q +CG T+ L
Sbjct: 3128 --------SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3179
Query: 500 TGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYT 559
T G V++ G G+LG ++ +I +L + V I G+ LT G V+T
Sbjct: 3180 TDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWT 3239
Query: 560 WGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGS 597
WGK +LG G P VE LR +++ V G+
Sbjct: 3240 WGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGA 3277
Score = 375 (137.1 bits), Expect = 4.8e-26, Sum P(3) = 4.8e-26
Identities = 125/412 (30%), Positives = 183/412 (44%)
Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
G ++ WG G+LG V P E L+ + + GE A+T G++Y G+
Sbjct: 3965 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATGY 4024
Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC--GEWHTAIVSTSGQLFTYGDGTF 398
G VG S S P L +++ V + KVA G H +S+ G+++++G+
Sbjct: 4025 GAGGRLGVGGTESVS--TPT-LLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4081
Query: 399 GVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
G LGHGN +P+ +ESLRG +V VA G H+A C + A G L+TWG
Sbjct: 4082 GKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSA---------CVTAA--GDLYTWGK 4130
Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAVHGQL 516
GRLGH D E +L P V L V +CG T+ LT V++ G +G+L
Sbjct: 4131 GRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKL 4190
Query: 517 GNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQER 576
G + + + L V + GS LT G+VYTWGK +LG G
Sbjct: 4191 GRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV 4250
Query: 577 ETPTFVEALRDRQVESVVCGSSITAAICLHKSISV---GDQ----------SSCSQCRMP 623
P V+ L+ ++V ++ GS +C + V GD ++ + R+
Sbjct: 4251 RRPRQVQGLQGKKVIAIATGS--LHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4308
Query: 624 FGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKI 675
+ KK N CG A ST K +A P + P YNHLQ+I
Sbjct: 4309 AALQGKKVNRVACGSAHTLAWSTSKPASAGKLPVQ-VPME-----YNHLQEI 4354
Score = 349 (127.9 bits), Expect = 4.7e-23, Sum P(3) = 4.7e-23
Identities = 106/391 (27%), Positives = 177/391 (45%)
Query: 245 KTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC 304
K + + P E L V I+ K ++++ G V+ N D
Sbjct: 435 KYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLA 484
Query: 305 PKLVECLSGINVQSVSCGE--FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL 362
P+LV+ L+ N+ ++ AL +GE+Y+WG + G +G + P K+
Sbjct: 485 PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGR--LGHGDTVPLEEP-KV 541
Query: 363 FDTLDGVRVSK----VACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESL 418
G + K +ACG ++A ++ G+L+T+G G +G LGHG+ ++ + P V L
Sbjct: 542 ISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL 601
Query: 419 RGLKVKSVACGPW--HTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPT 476
+GLKV VACG T A+ + G++++WGD D G+LG + P
Sbjct: 602 KGLKVIDVACGSGDAQTLAVTE-----------NGQVWSWGDGDYGKLGRGGSDGCKTPK 650
Query: 477 CVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD-RSITVVEGKLKE 535
+ +L D D V+ CG +V LT G+VY+ G + +LG+ + R ++EG L+
Sbjct: 651 LIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG-LQG 709
Query: 536 EFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVC 595
+ V +++GS H LT V++WG N Q + P+ + L + + + C
Sbjct: 710 KKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPSALPGLDTKHIVGIAC 769
Query: 596 G--SSITAAICLHKSISVGDQSSCSQCRMPF 624
G S + C SI + C M F
Sbjct: 770 GPAQSFAWSSCSEWSIGLRVPFVVDICSMTF 800
Score = 272 (100.8 bits), Expect = 3.2e-16, Sum P(3) = 3.2e-16
Identities = 79/274 (28%), Positives = 131/274 (47%)
Query: 332 SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
SG IY WGHN+ G L G ++ +P + L +R ++ GE V+ G+L+
Sbjct: 3964 SGTIYGWGHNHRG-QLGGIEGAKVK-VPTPC-EALAALRPVQLIGGEQTLFAVTADGKLY 4020
Query: 392 TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
G G G LG G ++VS P +ES++ + +K VA V+ C + + G
Sbjct: 4021 ATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVA---------VNSGGKHCLALSSEG 4071
Query: 452 KLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
++++WG+A+ G+LGH + P + L + V + G + +T G +YT G
Sbjct: 4072 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKG 4131
Query: 512 VHGQLGNPKAKDR-SITVVEGKLKEEFVK-GISSGSYHVAVLTSGGSVYTWGKNANGQLG 569
+G+LG+ ++D+ +VE V SG LT +V++WG G+LG
Sbjct: 4132 RYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4191
Query: 570 LGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
G S + P +++L V V CGS + A+
Sbjct: 4192 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4225
Score = 239 (89.2 bits), Expect = 1.9e-11, Sum P(3) = 1.9e-11
Identities = 85/332 (25%), Positives = 154/332 (46%)
Query: 292 GRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER 351
G +G K +V P E L+ + V ++C E + L+++G +YT +N+ D + +
Sbjct: 430 GLIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNS---DTLAPQ 486
Query: 352 RSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQ 411
+ R + V+++ + G + A+ +T G+++++G G G LGHG+ + +
Sbjct: 487 LVQG-LASRNI------VKIAAHSDGHHYLALAAT-GEVYSWGCGDGGRLGHGDTVPLEE 538
Query: 412 PKEVESLRGLK----VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHV 467
PK + + G + V +ACG ++AAI G+L D+ V
Sbjct: 539 PKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 598
Query: 468 DGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD-RSI 526
G + L +++D V G T+ +T G+V++ G +G+LG + ++
Sbjct: 599 AGLKGL------KVID---VACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTP 649
Query: 527 TVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALR 586
++E KL++ V + GS LT G VY+WGK N +LG G + P +E L+
Sbjct: 650 KLIE-KLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQ 708
Query: 587 DRQVESVVCGSSITAAICLHKSI-SVGDQSSC 617
++V V GS+ A+ + S G C
Sbjct: 709 GKKVIDVAAGSTHCLALTEDSEVHSWGSNDQC 740
Score = 227 (85.0 bits), Expect = 2.2e-10, Sum P(3) = 2.2e-10
Identities = 60/190 (31%), Positives = 92/190 (48%)
Query: 198 ESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLE 257
+ HR+V GS + + D +W G GD G G K +P ++
Sbjct: 4154 QGHRVVDVACGSGDAQTLCLTDDDTVWSWG--DGDYGKLGRGGSDGCK------VPMKID 4205
Query: 258 SAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQ 317
S L V + G++ + +TK G V+ WG+G RLGH + V P+ V+ L G V
Sbjct: 4206 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4265
Query: 318 SVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
+++ G ++ GE+YTWG N+ G +G+ + + PR L L G +V++VACG
Sbjct: 4266 AIATGSLHCVCCSEDGEVYTWGDNDEGQ--LGDGTTNAIQRPR-LVAALQGKKVNRVACG 4322
Query: 378 EWHTAIVSTS 387
HT STS
Sbjct: 4323 SAHTLAWSTS 4332
Score = 222 (83.2 bits), Expect = 3.0e-26, Sum P(3) = 3.0e-26
Identities = 73/232 (31%), Positives = 105/232 (45%)
Query: 378 EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
+W T SG ++ +G G LG V P E+L L+ + G A+
Sbjct: 3956 DW-TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVT 4014
Query: 438 DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRL--VDFDFVQASCGRML 495
D GKL+ G GRLG E PT + + V V + G
Sbjct: 4015 ---AD--------GKLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKH 4063
Query: 496 TVGLTGLGKVYTMGSAVHGQLG--NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTS 553
+ L+ G+VY+ G A G+LG N DR V+E L+ V +++G H A +T+
Sbjct: 4064 CLALSSEGEVYSWGEAEDGKLGHGNRSPCDRP-RVIES-LRGTEVVDVAAGGAHSACVTA 4121
Query: 554 GGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
G +YTWGK G+LG DS+++ P VEAL+ +V V CGS +CL
Sbjct: 4122 AGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCL 4173
Score = 207 (77.9 bits), Expect = 1.2e-24, Sum P(3) = 1.2e-24
Identities = 84/301 (27%), Positives = 127/301 (42%)
Query: 368 GVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVA 427
G + K A G A + T ++F +G LG + P E+L L V VA
Sbjct: 2952 GSLIRKKAAGLESAATIRT--KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVA 3009
Query: 428 CGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG-HVDGERKLLPTCVTRLVDFDF 486
G + ++ + V+ GK++ G+A GRLG + +P +T L +
Sbjct: 3010 GG---SKSLFAVTVE--------GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVV 3058
Query: 487 VQA---SCGRMLTVGLTGLGKVYTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGIS 542
+ S GR T LT GKV++ G G+LG+ + ++E LK + ++ I+
Sbjct: 3059 KKVAVHSGGRHATA-LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIA 3116
Query: 543 SGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
GS H A LTS G +YTWG G+LG GD+ + P V+ L +V V CGS
Sbjct: 3117 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQT 3176
Query: 603 ICLHKS---ISVGD-------QSSCSQCRMPFGFRRKKHN--CY-NCGLHFCSACSTKKI 649
+ L S GD + C +P R C CG F A + +
Sbjct: 3177 LALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGV 3236
Query: 650 I 650
+
Sbjct: 3237 V 3237
Score = 199 (75.1 bits), Expect = 3.0e-26, Sum P(3) = 3.0e-26
Identities = 55/158 (34%), Positives = 79/158 (50%)
Query: 221 VMIWGEGVLGGDIG-GAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
V WG+G G +G G DG KT PKL+E LDV + G++ + +TK
Sbjct: 627 VWSWGDGDYG-KLGRGGSDGC----KT------PKLIEKLQDLDVVKVRCGSQFSVALTK 675
Query: 280 EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
+G+V+ WG+G + RLGH V PKL+E L G V V+ G ALT+ E+++WG
Sbjct: 676 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Query: 340 HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
N+ R ++ P L LD + +ACG
Sbjct: 736 SNDQCQHFDTLRVTKPE--PSAL-PGLDTKHIVGIACG 770
Score = 96 (38.9 bits), Expect = 3.0e-13, Sum P(3) = 3.0e-13
Identities = 43/178 (24%), Positives = 72/178 (40%)
Query: 428 CGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFV 487
C +H ++I + +C+S+ I K+ G GR+ + + +P + + +
Sbjct: 2892 CTEYHR--YIEIAIKQCRSSGIDCKIH--GLILLGRIRAEEEDMAAVPFLASDNEEEEDE 2947
Query: 488 QASCGRMLTVGLTGLG-------KVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKG 540
+ + G ++ GL KV+ G QLG K + L V
Sbjct: 2948 KGNSGSLIRKKAAGLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQ 3007
Query: 541 ISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQER-ETPTFVEALRDRQVESVVCGS 597
++ GS + +T G VY G+ NG+LGLG S P + AL V+ V S
Sbjct: 3008 VAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHS 3065
Score = 50 (22.7 bits), Expect = 3.2e-16, Sum P(3) = 3.2e-16
Identities = 26/95 (27%), Positives = 45/95 (47%)
Query: 251 LLPKLLESAVMLD-VQNI-SLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLV 308
LL +L + V L+ + I L AK+ L + + +FC + RL + +D+ P L
Sbjct: 1664 LLKQLERAEVRLEGIDTILKLAAKNFLLPSVQYAMFCGWQ----RLIPE-GIDIGEP-LT 1717
Query: 309 ECLSGINVQSVSCGEFQTCALTKS-GEIYTWGHNN 342
+CL +++ F L + G++YTW N
Sbjct: 1718 DCLKDVDL----IPPFNRMLLEVTFGKLYTWAVQN 1748
Score = 40 (19.1 bits), Expect = 8.2e-37, Sum P(2) = 8.2e-37
Identities = 18/61 (29%), Positives = 32/61 (52%)
Query: 868 RLHTLSEKISAAKEAKEGVDANLPPKLDTDKHPEVKLPKDRKVDSL-CSSPIVFSNKLKS 926
RLH E+++A +E G+ A + P P + L +++++ C SP + + LKS
Sbjct: 4651 RLHEFDEQVAAVRE---GM-ARVVPV------PLLSLFTGYELETMVCGSPDIPLHLLKS 4700
Query: 927 V 927
V
Sbjct: 4701 V 4701
Score = 40 (19.1 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 26/99 (26%), Positives = 44/99 (44%)
Query: 464 LGHVDGERKLLPTCVTRLVDFDFVQAS-CGR-------MLTVGLTGLGKVYTMGSAVHGQ 515
L +D LL TR++ D ++ S CGR +L+ L+G+G Y + + +
Sbjct: 3544 LQSLDEFTSLLVVDDTRVL-VDLLKLSVCGRAGDKGRDVLSAVLSGMGTAYPQVADMLLE 3602
Query: 516 LGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSG 554
L + +D + G+L + V SS Y +SG
Sbjct: 3603 LCVTELEDVATDSQSGRLSSQPVVVESSHPYTDDTSSSG 3641
Score = 39 (18.8 bits), Expect = 8.8e-36, Sum P(3) = 8.8e-36
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 11 GQKEKQLRLNSVTKIIMGQRTVNFQC 36
G QL+ V K+++G R + C
Sbjct: 3145 GDNTTQLKPKMV-KVLLGHRVIQVAC 3169
Score = 37 (18.1 bits), Expect = 1.8e-35, Sum P(3) = 1.8e-35
Identities = 8/25 (32%), Positives = 13/25 (52%)
Query: 638 LHFCSACSTKKIINASLTPNKGKPS 662
+HFC + T +LT G+P+
Sbjct: 4798 IHFCKSIDTDDYARIALT---GEPA 4819
Score = 37 (18.1 bits), Expect = 4.7e-23, Sum P(3) = 4.7e-23
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 723 SRNVERKPGECLESASSLSSGLQRWG 748
S ++ RK LESA+++ + + WG
Sbjct: 2951 SGSLIRKKAAGLESAATIRTKVFVWG 2976
Score = 37 (18.1 bits), Expect = 6.8e-15, Sum P(3) = 6.8e-15
Identities = 11/56 (19%), Positives = 27/56 (48%)
Query: 303 SCPKLVECLSGINVQ-SVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHW 357
S P ++ + V+ SV+ +++ ++T + +G D++ + +SHW
Sbjct: 2645 SSPSHIKIGDKVRVKASVTTPKYKWGSVTHQSVGVVKAFSANGKDVIVDFPQQSHW 2700
>RGD|1307989 [details] [associations]
symbol:Herc2 "HECT and RLD domain containing E3 ubiquitin
protein ligase 2" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;IBA] [GO:0005634
"nucleus" evidence=ISO;IBA] [GO:0005737 "cytoplasm"
evidence=ISO;IBA] [GO:0005743 "mitochondrial inner membrane"
evidence=ISO] [GO:0006281 "DNA repair" evidence=ISO] [GO:0006974
"response to DNA damage stimulus" evidence=ISO] [GO:0007283
"spermatogenesis" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0020037 "heme binding" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=ISO] [GO:0032183 "SUMO binding"
evidence=ISO] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
RGD:1307989 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 GO:GO:0020037
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
GO:GO:0042787 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204 InterPro:IPR006624
SMART:SM00706 IPI:IPI00476523 Ensembl:ENSRNOT00000019318
UCSC:RGD:1307989 ArrayExpress:F1M716 Uniprot:F1M716
Length = 3607
Score = 470 (170.5 bits), Expect = 9.0e-37, Sum P(3) = 9.0e-37
Identities = 129/392 (32%), Positives = 195/392 (49%)
Query: 224 WGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEV 283
WG G +GG ++G+ + T +AL A + VQ I G + VT +G++
Sbjct: 2731 WGHNHRG-QLGG-IEGAKVKVPTPCEAL-------ATLRPVQLIG-GEQTLFAVTADGKL 2780
Query: 284 FCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGHN 341
+ G G GRLG VS P L+E + + ++ +V+ G AL+ GE+Y+WG
Sbjct: 2781 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEA 2840
Query: 342 NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVL 401
G G R PR + ++L G+ V VA G H+A V+ +G L+T+G G +G L
Sbjct: 2841 EDGKLGHGNRSPCDR--PR-VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 2897
Query: 402 GHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADK 461
GH + ++ +PK VE+L+G +V +ACG + C ++ +++WGD D
Sbjct: 2898 GHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTL-------CLTD--DDTVWSWGDGDY 2948
Query: 462 GRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA 521
G+LG + +P + L V+ CG +V LT G VYT G + +LG+
Sbjct: 2949 GKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD 3008
Query: 522 KD-RSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPT 580
R V+G L+ + V I++GS H T G VYTWG N GQLG G + + P
Sbjct: 3009 DHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPR 3067
Query: 581 FVEALRDRQVESVVCGSSITAAICLHKSISVG 612
V AL+ ++V V CGS+ T A K S G
Sbjct: 3068 LVAALQGKKVNRVACGSAHTLAWSTSKPASAG 3099
Score = 457 (165.9 bits), Expect = 8.7e-37, Sum P(2) = 8.7e-37
Identities = 117/355 (32%), Positives = 182/355 (51%)
Query: 252 LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMD-VSCPKLVEC 310
+P E+ L+V ++ G+K VT EG+V+ GE +GRLG ++ V P+ +
Sbjct: 1791 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITA 1850
Query: 311 LSGINVQSVSC--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
LS V+ V+ G ALT G++++WG + G +G SR + +L + L
Sbjct: 1851 LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK--LGHF-SRMNCDKPRLIEALKT 1907
Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
R+ +ACG H+A +++SG+L+T+G G +G LGHG+ +PK V+ L G +V VAC
Sbjct: 1908 KRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 1967
Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ 488
G + + D G +F+WGD D G+LG E +P + RL Q
Sbjct: 1968 GSRDAQTLA--LTDE-------GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQ 2018
Query: 489 ASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK-AKDRSITVVEGKLKEEFVKGISSGSYH 547
CG ++ LT G V+T G + +LG+ R VVEG L+ + + ++ G+ H
Sbjct: 2019 IECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALH 2077
Query: 548 VAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
+T G VY WG N +GQ G G + PT V+ L +++ V CGSS + A
Sbjct: 2078 CLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 2132
Score = 388 (141.6 bits), Expect = 7.2e-28, Sum P(3) = 7.2e-28
Identities = 108/344 (31%), Positives = 166/344 (48%)
Query: 253 PKLLESAVMLDVQNISL--GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVEC 310
P LLES + ++ +++ G KH ++ EGEV+ WGE +DG+LGH P+++E
Sbjct: 2802 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 2861
Query: 311 LSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR 370
L GI V V+ G + +T +G++YTWG +G +G S P KL + L G R
Sbjct: 2862 LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR--LGHSDSEDQLKP-KLVEALQGHR 2918
Query: 371 VSKVACG--EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
V +ACG + T ++ ++++GDG +G LG G P +++SL GL V V C
Sbjct: 2919 VIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC 2978
Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ 488
G + A+ KS A+ +TWG D RLGH + P V L +
Sbjct: 2979 GSQFSVALT-------KSGAV----YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIA 3027
Query: 489 ASCGRMLTVGLTGLGKVYTMGSAVHGQLG----NPKAKDRSITVVEGKLKEEFVKGISSG 544
+ G + V T G+VYT G GQLG N + R + ++GK V ++ G
Sbjct: 3028 IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKK----VNRVACG 3083
Query: 545 SYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDR 588
S H ++ GK Q+ + + +E P + ALR+R
Sbjct: 3084 SAHTLAWSTSKPASA-GK-LPAQVPMEYNHLQEIP--IIALRNR 3123
Score = 375 (137.1 bits), Expect = 6.2e-28, Sum P(2) = 6.2e-28
Identities = 99/320 (30%), Positives = 156/320 (48%)
Query: 282 EVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
+VF WG +LG + P E LS +NV V+ G A+T G++Y+ G
Sbjct: 1769 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEA 1828
Query: 342 NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC--GEWHTAIVSTSGQLFTYGDGTFG 399
+G +G S + +PR++ L V KVA G H ++ G++F++G+G G
Sbjct: 1829 TNGRLGLG-MSSGTVPIPRQI-TALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDG 1886
Query: 400 VLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
LGH + N +P+ +E+L+ +++ +ACG H+AA+ G+L+TWG
Sbjct: 1887 KLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTS-----------SGELYTWGLG 1935
Query: 460 DKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRM--LTVGLTGLGKVYTMGSAVHGQLG 517
+ GRLGH D +L P V L+ +Q +CG T+ LT G V++ G G+LG
Sbjct: 1936 EYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG 1995
Query: 518 NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERE 577
++ +I +L + V I G+ LT G V+TWGK +LG G
Sbjct: 1996 RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVR 2055
Query: 578 TPTFVEALRDRQVESVVCGS 597
P VE LR +++ V G+
Sbjct: 2056 KPQVVEGLRGKKIVHVAVGA 2075
Score = 374 (136.7 bits), Expect = 2.3e-26, Sum P(3) = 2.3e-26
Identities = 121/411 (29%), Positives = 182/411 (44%)
Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
G ++ WG G+LG V P E L+ + + GE A+T G++Y G+
Sbjct: 2726 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 2785
Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC--GEWHTAIVSTSGQLFTYGDGTF 398
G +G S S P L +++ V + KVA G H +S+ G+++++G+
Sbjct: 2786 GAGGRLGIGGTESVS--TPT-LLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 2842
Query: 399 GVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
G LGHGN +P+ +ESLRG++V VA G H+A C + A G L+TWG
Sbjct: 2843 GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSA---------CVTAA--GDLYTWGK 2891
Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAVHGQL 516
GRLGH D E +L P V L + +CG T+ LT V++ G +G+L
Sbjct: 2892 GRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKL 2951
Query: 517 GNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQER 576
G + + + L V + GS LT G+VYTWGK +LG G
Sbjct: 2952 GRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV 3011
Query: 577 ETPTFVEALRDRQVESVVCGSSITAAICLHKS------------ISVGDQSSCSQCRMPF 624
P V+ L+ ++V ++ GS + C + G ++ + R+
Sbjct: 3012 RRPRQVQGLQGKKVIAIATGS-LHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVA 3070
Query: 625 GFRRKKHNCYNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKI 675
+ KK N CG A ST K +A P + P YNHLQ+I
Sbjct: 3071 ALQGKKVNRVACGSAHTLAWSTSKPASAGKLPAQ-VPME-----YNHLQEI 3115
Score = 271 (100.5 bits), Expect = 2.1e-15, Sum P(3) = 2.1e-15
Identities = 79/274 (28%), Positives = 133/274 (48%)
Query: 332 SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
SG IY WGHN+ G L G ++ +P + L +R ++ GE V+ G+L+
Sbjct: 2725 SGTIYGWGHNHRG-QLGGIEGAKVK-VPTPC-EALATLRPVQLIGGEQTLFAVTADGKLY 2781
Query: 392 TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
G G G LG G ++VS P +ES++ + +K VA V+ C + + G
Sbjct: 2782 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVA---------VNSGGKHCLALSSEG 2832
Query: 452 KLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
++++WG+A+ G+LGH + P + L + V + G + +T G +YT G
Sbjct: 2833 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 2892
Query: 512 VHGQLGNPKAKDRSITVVEGKLKEEFVKGIS--SGSYHVAVLTSGGSVYTWGKNANGQLG 569
+G+LG+ ++D+ + L+ V I+ SG LT +V++WG G+LG
Sbjct: 2893 RYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 2952
Query: 570 LGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
G S + P +++L V V CGS + A+
Sbjct: 2953 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 2986
Score = 229 (85.7 bits), Expect = 5.4e-11, Sum P(3) = 5.4e-11
Identities = 60/190 (31%), Positives = 92/190 (48%)
Query: 198 ESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLE 257
+ HR++ GS + + D +W G GD G G K +P ++
Sbjct: 2915 QGHRVIDIACGSGDAQTLCLTDDDTVWSWG--DGDYGKLGRGGSDGCK------VPMKID 2966
Query: 258 SAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQ 317
S L V + G++ + +TK G V+ WG+G RLGH + V P+ V+ L G V
Sbjct: 2967 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 3026
Query: 318 SVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
+++ G T+ GE+YTWG N+ G +G+ + + PR L L G +V++VACG
Sbjct: 3027 AIATGSLHCVCCTEDGEVYTWGDNDEGQ--LGDGTTNAIQRPR-LVAALQGKKVNRVACG 3083
Query: 378 EWHTAIVSTS 387
HT STS
Sbjct: 3084 SAHTLAWSTS 3093
Score = 216 (81.1 bits), Expect = 1.0e-25, Sum P(4) = 1.0e-25
Identities = 72/232 (31%), Positives = 105/232 (45%)
Query: 378 EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
+W T SG ++ +G G LG V P E+L L+ + G A+
Sbjct: 2717 DW-TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 2775
Query: 438 DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRL--VDFDFVQASCGRML 495
D GKL+ G GRLG E PT + + V V + G
Sbjct: 2776 ---AD--------GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKH 2824
Query: 496 TVGLTGLGKVYTMGSAVHGQLG--NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTS 553
+ L+ G+VY+ G A G+LG N DR V+E L+ V +++G H A +T+
Sbjct: 2825 CLALSSEGEVYSWGEAEDGKLGHGNRSPCDRP-RVIES-LRGIEVVDVAAGGAHSACVTA 2882
Query: 554 GGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
G +YTWGK G+LG DS+++ P VEAL+ +V + CGS +CL
Sbjct: 2883 AGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCL 2934
Score = 208 (78.3 bits), Expect = 1.0e-25, Sum P(4) = 1.0e-25
Identities = 58/189 (30%), Positives = 94/189 (49%)
Query: 200 HRLVTPTYGSPLIERKDILKDVMI--WGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLE 257
HR++ GS + + + ++ WG+G G +G GS N +P+ +E
Sbjct: 1960 HRVIQVACGSRDAQTLALTDEGLVFSWGDGDFG-KLGRG--GSEGCN-------IPQNIE 2009
Query: 258 SAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQ 317
V I GA+ + +TK G V+ WG+G RLGH ++ V P++VE L G +
Sbjct: 2010 RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIV 2069
Query: 318 SVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
V+ G A+T SG++Y WG N+HG G + + P L L+G ++++VACG
Sbjct: 2070 HVAVGALHCLAVTDSGQVYAWGDNDHGQQ--GNGTTTVNRKPT-LVQGLEGQKITRVACG 2126
Query: 378 EWHTAIVST 386
H+ +T
Sbjct: 2127 SSHSVAWTT 2135
Score = 207 (77.9 bits), Expect = 4.7e-10, Sum P(2) = 4.7e-10
Identities = 121/468 (25%), Positives = 198/468 (42%)
Query: 368 GVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVA 427
G + K G TA + T ++F +G LG + P E+L L V VA
Sbjct: 1750 GSLIRKKTPGLESTATIRT--KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVA 1807
Query: 428 CGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG-HVDGERKLLPTCVTRLVDFDF 486
G + ++ + V+ GK+++ G+A GRLG + +P +T L +
Sbjct: 1808 GG---SKSLFAVTVE--------GKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVV 1856
Query: 487 VQA---SCGRMLTVGLTGLGKVYTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGIS 542
+ S GR T LT GKV++ G G+LG+ + ++E LK + ++ I+
Sbjct: 1857 KKVAVHSGGRHATA-LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIA 1914
Query: 543 SGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
GS H A LTS G +YTWG G+LG GD+ + P V+ L +V V CGS
Sbjct: 1915 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQT 1974
Query: 603 ICLHKS---ISVGD-------QSSCSQCRMPFGFRRKKHN--CY-NCGLHFCSACSTKKI 649
+ L S GD + C +P R C CG F A + +
Sbjct: 1975 LALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGV 2034
Query: 650 INASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQ-GSLSEEVKEEKG 708
+ T KG R+ H++K +++ E + ++++ G+L + G
Sbjct: 2035 V---WTWGKGDYFRLGHGSDVHVRK----PQVV--EGLRGKKIVHVAVGALHCLAVTDSG 2085
Query: 709 ALTPSRGQSFTSKQSRN---VERKPGECLESASSLSSGL--QRWGQVSCPIRFKTHCHEK 763
+ + G + +Q V RKP +L GL Q+ +V+C +H
Sbjct: 2086 QVY-AWGDNDHGQQGNGTTTVNRKP--------TLVQGLEGQKITRVACG---SSH---- 2129
Query: 764 SVEPTPIPKTQMSTHSPLLRKIS---LGSNFIPIASTVEKDLSESNKM 808
SV T + S H P+L + + LG++++ + S + S SNK+
Sbjct: 2130 SVAWTTVDVATPSVHEPVLFQTARDPLGASYLGVPSDADSS-SSSNKI 2176
Score = 40 (19.1 bits), Expect = 8.7e-37, Sum P(2) = 8.7e-37
Identities = 18/61 (29%), Positives = 32/61 (52%)
Query: 868 RLHTLSEKISAAKEAKEGVDANLPPKLDTDKHPEVKLPKDRKVDSL-CSSPIVFSNKLKS 926
RLH E+++A +E G+ A + P P + L +++++ C SP + + LKS
Sbjct: 3411 RLHEFDEQVAAVRE---GM-ARVVPV------PLLSLFTGYELETMVCGSPDIPLHLLKS 3460
Query: 927 V 927
V
Sbjct: 3461 V 3461
Score = 39 (18.8 bits), Expect = 9.0e-37, Sum P(3) = 9.0e-37
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 11 GQKEKQLRLNSVTKIIMGQRTVNFQC 36
G QL+ V K+++G R + C
Sbjct: 1943 GDNTTQLKPKMV-KVLLGHRVIQVAC 1967
Score = 39 (18.8 bits), Expect = 6.6e-08, Sum P(4) = 6.6e-08
Identities = 18/64 (28%), Positives = 30/64 (46%)
Query: 492 GR-MLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAV 550
GR +L+ L+G+G Y + + +L + +D + G+L + V SS Y
Sbjct: 2375 GREVLSAVLSGMGIAYPQVADMLLELCVTELEDVATDSQSGRLSSQPVVVESSHPYTDDT 2434
Query: 551 LTSG 554
TSG
Sbjct: 2435 STSG 2438
Score = 37 (18.1 bits), Expect = 1.8e-36, Sum P(3) = 1.8e-36
Identities = 8/25 (32%), Positives = 13/25 (52%)
Query: 638 LHFCSACSTKKIINASLTPNKGKPS 662
+HFC + T +LT G+P+
Sbjct: 3558 IHFCKSIDTDDYARIALT---GEPA 3579
>UNIPROTKB|F1M560 [details] [associations]
symbol:Herc2 "Protein Herc2" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
RGD:1307989 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0046872
GO:GO:0008270 GO:GO:0020037 GO:GO:0005622 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.10.120.10
SUPFAM:SSF55856 InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939
Pfam:PF03256 PROSITE:PS51284 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204 InterPro:IPR006624
SMART:SM00706 IPI:IPI00779702 Ensembl:ENSRNOT00000055965
ArrayExpress:F1M560 Uniprot:F1M560
Length = 3643
Score = 470 (170.5 bits), Expect = 9.3e-37, Sum P(3) = 9.3e-37
Identities = 129/392 (32%), Positives = 195/392 (49%)
Query: 224 WGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEV 283
WG G +GG ++G+ + T +AL A + VQ I G + VT +G++
Sbjct: 2767 WGHNHRG-QLGG-IEGAKVKVPTPCEAL-------ATLRPVQLIG-GEQTLFAVTADGKL 2816
Query: 284 FCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGHN 341
+ G G GRLG VS P L+E + + ++ +V+ G AL+ GE+Y+WG
Sbjct: 2817 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEA 2876
Query: 342 NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVL 401
G G R PR + ++L G+ V VA G H+A V+ +G L+T+G G +G L
Sbjct: 2877 EDGKLGHGNRSPCDR--PR-VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 2933
Query: 402 GHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADK 461
GH + ++ +PK VE+L+G +V +ACG + C ++ +++WGD D
Sbjct: 2934 GHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTL-------CLTD--DDTVWSWGDGDY 2984
Query: 462 GRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA 521
G+LG + +P + L V+ CG +V LT G VYT G + +LG+
Sbjct: 2985 GKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD 3044
Query: 522 KD-RSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPT 580
R V+G L+ + V I++GS H T G VYTWG N GQLG G + + P
Sbjct: 3045 DHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPR 3103
Query: 581 FVEALRDRQVESVVCGSSITAAICLHKSISVG 612
V AL+ ++V V CGS+ T A K S G
Sbjct: 3104 LVAALQGKKVNRVACGSAHTLAWSTSKPASAG 3135
Score = 457 (165.9 bits), Expect = 8.9e-37, Sum P(2) = 8.9e-37
Identities = 117/355 (32%), Positives = 182/355 (51%)
Query: 252 LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMD-VSCPKLVEC 310
+P E+ L+V ++ G+K VT EG+V+ GE +GRLG ++ V P+ +
Sbjct: 1791 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITA 1850
Query: 311 LSGINVQSVSC--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
LS V+ V+ G ALT G++++WG + G +G SR + +L + L
Sbjct: 1851 LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK--LGHF-SRMNCDKPRLIEALKT 1907
Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
R+ +ACG H+A +++SG+L+T+G G +G LGHG+ +PK V+ L G +V VAC
Sbjct: 1908 KRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 1967
Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ 488
G + + D G +F+WGD D G+LG E +P + RL Q
Sbjct: 1968 GSRDAQTLA--LTDE-------GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQ 2018
Query: 489 ASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK-AKDRSITVVEGKLKEEFVKGISSGSYH 547
CG ++ LT G V+T G + +LG+ R VVEG L+ + + ++ G+ H
Sbjct: 2019 IECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALH 2077
Query: 548 VAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
+T G VY WG N +GQ G G + PT V+ L +++ V CGSS + A
Sbjct: 2078 CLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 2132
Score = 388 (141.6 bits), Expect = 7.5e-28, Sum P(3) = 7.5e-28
Identities = 108/344 (31%), Positives = 166/344 (48%)
Query: 253 PKLLESAVMLDVQNISL--GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVEC 310
P LLES + ++ +++ G KH ++ EGEV+ WGE +DG+LGH P+++E
Sbjct: 2838 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 2897
Query: 311 LSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR 370
L GI V V+ G + +T +G++YTWG +G +G S P KL + L G R
Sbjct: 2898 LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR--LGHSDSEDQLKP-KLVEALQGHR 2954
Query: 371 VSKVACG--EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
V +ACG + T ++ ++++GDG +G LG G P +++SL GL V V C
Sbjct: 2955 VIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC 3014
Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ 488
G + A+ KS A+ +TWG D RLGH + P V L +
Sbjct: 3015 GSQFSVALT-------KSGAV----YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIA 3063
Query: 489 ASCGRMLTVGLTGLGKVYTMGSAVHGQLG----NPKAKDRSITVVEGKLKEEFVKGISSG 544
+ G + V T G+VYT G GQLG N + R + ++GK V ++ G
Sbjct: 3064 IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKK----VNRVACG 3119
Query: 545 SYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDR 588
S H ++ GK Q+ + + +E P + ALR+R
Sbjct: 3120 SAHTLAWSTSKPASA-GK-LPAQVPMEYNHLQEIP--IIALRNR 3159
Score = 375 (137.1 bits), Expect = 6.3e-28, Sum P(2) = 6.3e-28
Identities = 99/320 (30%), Positives = 156/320 (48%)
Query: 282 EVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
+VF WG +LG + P E LS +NV V+ G A+T G++Y+ G
Sbjct: 1769 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEA 1828
Query: 342 NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC--GEWHTAIVSTSGQLFTYGDGTFG 399
+G +G S + +PR++ L V KVA G H ++ G++F++G+G G
Sbjct: 1829 TNGRLGLG-MSSGTVPIPRQI-TALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDG 1886
Query: 400 VLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
LGH + N +P+ +E+L+ +++ +ACG H+AA+ G+L+TWG
Sbjct: 1887 KLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTS-----------SGELYTWGLG 1935
Query: 460 DKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRM--LTVGLTGLGKVYTMGSAVHGQLG 517
+ GRLGH D +L P V L+ +Q +CG T+ LT G V++ G G+LG
Sbjct: 1936 EYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG 1995
Query: 518 NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERE 577
++ +I +L + V I G+ LT G V+TWGK +LG G
Sbjct: 1996 RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVR 2055
Query: 578 TPTFVEALRDRQVESVVCGS 597
P VE LR +++ V G+
Sbjct: 2056 KPQVVEGLRGKKIVHVAVGA 2075
Score = 374 (136.7 bits), Expect = 2.4e-26, Sum P(3) = 2.4e-26
Identities = 121/411 (29%), Positives = 182/411 (44%)
Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
G ++ WG G+LG V P E L+ + + GE A+T G++Y G+
Sbjct: 2762 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 2821
Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC--GEWHTAIVSTSGQLFTYGDGTF 398
G +G S S P L +++ V + KVA G H +S+ G+++++G+
Sbjct: 2822 GAGGRLGIGGTESVS--TPT-LLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 2878
Query: 399 GVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
G LGHGN +P+ +ESLRG++V VA G H+A C + A G L+TWG
Sbjct: 2879 GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSA---------CVTAA--GDLYTWGK 2927
Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAVHGQL 516
GRLGH D E +L P V L + +CG T+ LT V++ G +G+L
Sbjct: 2928 GRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKL 2987
Query: 517 GNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQER 576
G + + + L V + GS LT G+VYTWGK +LG G
Sbjct: 2988 GRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV 3047
Query: 577 ETPTFVEALRDRQVESVVCGSSITAAICLHKS------------ISVGDQSSCSQCRMPF 624
P V+ L+ ++V ++ GS + C + G ++ + R+
Sbjct: 3048 RRPRQVQGLQGKKVIAIATGS-LHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVA 3106
Query: 625 GFRRKKHNCYNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKI 675
+ KK N CG A ST K +A P + P YNHLQ+I
Sbjct: 3107 ALQGKKVNRVACGSAHTLAWSTSKPASAGKLPAQ-VPME-----YNHLQEI 3151
Score = 271 (100.5 bits), Expect = 2.2e-15, Sum P(3) = 2.2e-15
Identities = 79/274 (28%), Positives = 133/274 (48%)
Query: 332 SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
SG IY WGHN+ G L G ++ +P + L +R ++ GE V+ G+L+
Sbjct: 2761 SGTIYGWGHNHRG-QLGGIEGAKVK-VPTPC-EALATLRPVQLIGGEQTLFAVTADGKLY 2817
Query: 392 TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
G G G LG G ++VS P +ES++ + +K VA V+ C + + G
Sbjct: 2818 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVA---------VNSGGKHCLALSSEG 2868
Query: 452 KLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
++++WG+A+ G+LGH + P + L + V + G + +T G +YT G
Sbjct: 2869 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 2928
Query: 512 VHGQLGNPKAKDRSITVVEGKLKEEFVKGIS--SGSYHVAVLTSGGSVYTWGKNANGQLG 569
+G+LG+ ++D+ + L+ V I+ SG LT +V++WG G+LG
Sbjct: 2929 RYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 2988
Query: 570 LGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
G S + P +++L V V CGS + A+
Sbjct: 2989 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 3022
Score = 229 (85.7 bits), Expect = 5.5e-11, Sum P(3) = 5.5e-11
Identities = 60/190 (31%), Positives = 92/190 (48%)
Query: 198 ESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLE 257
+ HR++ GS + + D +W G GD G G K +P ++
Sbjct: 2951 QGHRVIDIACGSGDAQTLCLTDDDTVWSWG--DGDYGKLGRGGSDGCK------VPMKID 3002
Query: 258 SAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQ 317
S L V + G++ + +TK G V+ WG+G RLGH + V P+ V+ L G V
Sbjct: 3003 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 3062
Query: 318 SVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
+++ G T+ GE+YTWG N+ G +G+ + + PR L L G +V++VACG
Sbjct: 3063 AIATGSLHCVCCTEDGEVYTWGDNDEGQ--LGDGTTNAIQRPR-LVAALQGKKVNRVACG 3119
Query: 378 EWHTAIVSTS 387
HT STS
Sbjct: 3120 SAHTLAWSTS 3129
Score = 216 (81.1 bits), Expect = 1.1e-25, Sum P(4) = 1.1e-25
Identities = 72/232 (31%), Positives = 105/232 (45%)
Query: 378 EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
+W T SG ++ +G G LG V P E+L L+ + G A+
Sbjct: 2753 DW-TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 2811
Query: 438 DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRL--VDFDFVQASCGRML 495
D GKL+ G GRLG E PT + + V V + G
Sbjct: 2812 ---AD--------GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKH 2860
Query: 496 TVGLTGLGKVYTMGSAVHGQLG--NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTS 553
+ L+ G+VY+ G A G+LG N DR V+E L+ V +++G H A +T+
Sbjct: 2861 CLALSSEGEVYSWGEAEDGKLGHGNRSPCDRP-RVIES-LRGIEVVDVAAGGAHSACVTA 2918
Query: 554 GGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
G +YTWGK G+LG DS+++ P VEAL+ +V + CGS +CL
Sbjct: 2919 AGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCL 2970
Score = 208 (78.3 bits), Expect = 1.1e-25, Sum P(4) = 1.1e-25
Identities = 58/189 (30%), Positives = 94/189 (49%)
Query: 200 HRLVTPTYGSPLIERKDILKDVMI--WGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLE 257
HR++ GS + + + ++ WG+G G +G GS N +P+ +E
Sbjct: 1960 HRVIQVACGSRDAQTLALTDEGLVFSWGDGDFG-KLGRG--GSEGCN-------IPQNIE 2009
Query: 258 SAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQ 317
V I GA+ + +TK G V+ WG+G RLGH ++ V P++VE L G +
Sbjct: 2010 RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIV 2069
Query: 318 SVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
V+ G A+T SG++Y WG N+HG G + + P L L+G ++++VACG
Sbjct: 2070 HVAVGALHCLAVTDSGQVYAWGDNDHGQQ--GNGTTTVNRKPT-LVQGLEGQKITRVACG 2126
Query: 378 EWHTAIVST 386
H+ +T
Sbjct: 2127 SSHSVAWTT 2135
Score = 207 (77.9 bits), Expect = 4.8e-10, Sum P(2) = 4.8e-10
Identities = 121/468 (25%), Positives = 198/468 (42%)
Query: 368 GVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVA 427
G + K G TA + T ++F +G LG + P E+L L V VA
Sbjct: 1750 GSLIRKKTPGLESTATIRT--KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVA 1807
Query: 428 CGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG-HVDGERKLLPTCVTRLVDFDF 486
G + ++ + V+ GK+++ G+A GRLG + +P +T L +
Sbjct: 1808 GG---SKSLFAVTVE--------GKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVV 1856
Query: 487 VQA---SCGRMLTVGLTGLGKVYTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGIS 542
+ S GR T LT GKV++ G G+LG+ + ++E LK + ++ I+
Sbjct: 1857 KKVAVHSGGRHATA-LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIA 1914
Query: 543 SGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
GS H A LTS G +YTWG G+LG GD+ + P V+ L +V V CGS
Sbjct: 1915 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQT 1974
Query: 603 ICLHKS---ISVGD-------QSSCSQCRMPFGFRRKKHN--CY-NCGLHFCSACSTKKI 649
+ L S GD + C +P R C CG F A + +
Sbjct: 1975 LALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGV 2034
Query: 650 INASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQ-GSLSEEVKEEKG 708
+ T KG R+ H++K +++ E + ++++ G+L + G
Sbjct: 2035 V---WTWGKGDYFRLGHGSDVHVRK----PQVV--EGLRGKKIVHVAVGALHCLAVTDSG 2085
Query: 709 ALTPSRGQSFTSKQSRN---VERKPGECLESASSLSSGL--QRWGQVSCPIRFKTHCHEK 763
+ + G + +Q V RKP +L GL Q+ +V+C +H
Sbjct: 2086 QVY-AWGDNDHGQQGNGTTTVNRKP--------TLVQGLEGQKITRVACG---SSH---- 2129
Query: 764 SVEPTPIPKTQMSTHSPLLRKIS---LGSNFIPIASTVEKDLSESNKM 808
SV T + S H P+L + + LG++++ + S + S SNK+
Sbjct: 2130 SVAWTTVDVATPSVHEPVLFQTARDPLGASYLGVPSDADSS-SSSNKI 2176
Score = 40 (19.1 bits), Expect = 8.9e-37, Sum P(2) = 8.9e-37
Identities = 18/61 (29%), Positives = 32/61 (52%)
Query: 868 RLHTLSEKISAAKEAKEGVDANLPPKLDTDKHPEVKLPKDRKVDSL-CSSPIVFSNKLKS 926
RLH E+++A +E G+ A + P P + L +++++ C SP + + LKS
Sbjct: 3447 RLHEFDEQVAAVRE---GM-ARVVPV------PLLSLFTGYELETMVCGSPDIPLHLLKS 3496
Query: 927 V 927
V
Sbjct: 3497 V 3497
Score = 39 (18.8 bits), Expect = 9.3e-37, Sum P(3) = 9.3e-37
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 11 GQKEKQLRLNSVTKIIMGQRTVNFQC 36
G QL+ V K+++G R + C
Sbjct: 1943 GDNTTQLKPKMV-KVLLGHRVIQVAC 1967
Score = 39 (18.8 bits), Expect = 6.8e-08, Sum P(4) = 6.8e-08
Identities = 18/64 (28%), Positives = 30/64 (46%)
Query: 492 GR-MLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAV 550
GR +L+ L+G+G Y + + +L + +D + G+L + V SS Y
Sbjct: 2375 GREVLSAVLSGMGIAYPQVADMLLELCVTELEDVATDSQSGRLSSQPVVVESSHPYTDDT 2434
Query: 551 LTSG 554
TSG
Sbjct: 2435 STSG 2438
Score = 37 (18.1 bits), Expect = 1.9e-36, Sum P(3) = 1.9e-36
Identities = 8/25 (32%), Positives = 13/25 (52%)
Query: 638 LHFCSACSTKKIINASLTPNKGKPS 662
+HFC + T +LT G+P+
Sbjct: 3594 IHFCKSIDTDDYARIALT---GEPA 3615
>UNIPROTKB|E1BW48 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0020037
"heme binding" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] [GO:0032183 "SUMO binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR009060 InterPro:IPR010606
Pfam:PF00173 Pfam:PF00569 Pfam:PF06701 PROSITE:PS01357
PROSITE:PS50135 PROSITE:PS50237 PROSITE:PS50255 PROSITE:PS51416
SMART:SM00119 SMART:SM00291 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005743 GO:GO:0046872 GO:GO:0008270
GO:GO:0006281 GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.10.120.10 SUPFAM:SSF55856
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256
PROSITE:PS51284 SUPFAM:SSF46934 Gene3D:2.30.30.30
InterPro:IPR021097 InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 OMA:QLAFTRD EMBL:AADN02017653
IPI:IPI00571031 Ensembl:ENSGALT00000027018 ArrayExpress:E1BW48
Uniprot:E1BW48
Length = 4841
Score = 471 (170.9 bits), Expect = 2.0e-36, Sum P(3) = 2.0e-36
Identities = 128/394 (32%), Positives = 197/394 (50%)
Query: 224 WGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEV 283
WG G +GG ++G+ + T +AL A + VQ I G + VT +G++
Sbjct: 3962 WGHNHRG-QLGG-IEGAKVKVPTPCEAL-------ATLRPVQLIG-GEQTLFAVTADGKL 4011
Query: 284 FCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGHN 341
+ G G GRLG VS P L+E + + ++ +V+ G AL+ GE+Y+WG
Sbjct: 4012 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEA 4071
Query: 342 NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVL 401
G G R PR + ++L G+ V +A G H+A ++ +G LFT+G G +G L
Sbjct: 4072 EDGKLGHGNRSPCDR--PR-VIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRL 4128
Query: 402 GHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADK 461
GHG+ ++ +PK VE+L+G +V +ACG + C ++ +++WGD D
Sbjct: 4129 GHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTL-------CLTD--DDTVWSWGDGDY 4179
Query: 462 GRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA 521
G+LG + +P + L D V+ CG +V LT G VYT G + +LG+
Sbjct: 4180 GKLGRGGSDGCKVPMKIDSLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD 4239
Query: 522 KD-RSITVVEGKLKEEFVKGISSGSYHVAVLTSGG--SVYTWGKNANGQLGLGDSQERET 578
R V+G L+ + V I++GS H T G VYTWG N GQLG G + +
Sbjct: 4240 DHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGLGEVYTWGDNDEGQLGDGTTNAIQR 4298
Query: 579 PTFVEALRDRQVESVVCGSSITAAICLHKSISVG 612
P V AL+ +++ V CGS+ T A K + G
Sbjct: 4299 PRLVAALQGKKINRVACGSAHTLAWSTSKPANAG 4332
Score = 461 (167.3 bits), Expect = 3.9e-35, Sum P(3) = 3.9e-35
Identities = 118/355 (33%), Positives = 182/355 (51%)
Query: 252 LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMD-VSCPKLVEC 310
+P E+ L+V ++ G+K VT EG+V+ GE +GRLG ++ V P+ +
Sbjct: 2986 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITA 3045
Query: 311 LSGINVQSVSC--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
LS V+ V+ G ALT G+I++WG + G +G SR + +L + L
Sbjct: 3046 LSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGK--LGHF-SRMNCDKPRLIEALKT 3102
Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
R+ +ACG H+A +++SG+L+T+G G +G LGHG+ +PK V+ L G +V VAC
Sbjct: 3103 KRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 3162
Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ 488
G + + D G +F+WGD D G+LG E +P + RL Q
Sbjct: 3163 GSRDAQTLA--LTDE-------GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQ 3213
Query: 489 ASCGRMLTVGLTGLGKVYTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGISSGSYH 547
CG ++ LT G V+T G + +LG+ R VVEG L+ + + ++ G+ H
Sbjct: 3214 IECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEG-LRGKKIVHVAVGALH 3272
Query: 548 VAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
+T G VY WG N +GQ G G + PT V+ L +++ V CGSS + A
Sbjct: 3273 CLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3327
Score = 410 (149.4 bits), Expect = 2.1e-31, Sum P(2) = 2.1e-31
Identities = 102/325 (31%), Positives = 164/325 (50%)
Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISL--GAKHAALVTKEGEVFCWGEGKD 291
G A +G + + +P+ + + V+ +++ G +HA +T +G++F WGEG D
Sbjct: 3021 GEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDD 3080
Query: 292 GRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER 351
G+LGH M+ P+L+E L ++ ++CG + A+T SGE+YTWG +G +G
Sbjct: 3081 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGR--LGHG 3138
Query: 352 RSRSHWLPRKLFDTLDGVRVSKVACG--EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV 409
+ + P K+ L G RV +VACG + T ++ G +F++GDG FG LG G +
Sbjct: 3139 DNTTQLKP-KMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 3197
Query: 410 SQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDG 469
+ P+ +E L G V + CG + A+ KS G ++TWG D RLGH
Sbjct: 3198 NIPQNIERLNGQGVCQIECGAQFSLALT-------KS----GVVWTWGKGDYFRLGHGTD 3246
Query: 470 ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAK-DRSITV 528
P V L V + G + + +T G+VY G HGQ GN +R T+
Sbjct: 3247 VHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTL 3306
Query: 529 VEGKLKEEFVKGISSGSYHVAVLTS 553
V+G L+ + + ++ GS H T+
Sbjct: 3307 VQG-LEGQKITRVACGSSHSVAWTT 3330
Score = 390 (142.3 bits), Expect = 1.2e-27, Sum P(3) = 1.2e-27
Identities = 122/413 (29%), Positives = 184/413 (44%)
Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
G ++ WG G+LG V P E L+ + + GE A+T G++Y G+
Sbjct: 3957 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4016
Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC--GEWHTAIVSTSGQLFTYGDGTF 398
G +G S S P L +++ V + KVA G H +S+ G+++++G+
Sbjct: 4017 GAGGRLGIGGTESVS--TPT-LLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4073
Query: 399 GVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
G LGHGN +P+ +ESLRG++V +A G H+A I G LFTWG
Sbjct: 4074 GKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACIT-----------AAGDLFTWGK 4122
Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAVHGQL 516
GRLGH D E +L P V L + + +CG T+ LT V++ G +G+L
Sbjct: 4123 GRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKL 4182
Query: 517 GNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQER 576
G + + + L + V + GS LT G+VYTWGK +LG G
Sbjct: 4183 GRGGSDGCKVPMKIDSLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV 4242
Query: 577 ETPTFVEALRDRQVESVVCGSSITAAICLHKSIS------------VGD--QSSCSQCRM 622
P V+ L+ ++V ++ GS + C + +GD ++ + R+
Sbjct: 4243 RRPRQVQGLQGKKVIAIATGS-LHCVCCTEDGLGEVYTWGDNDEGQLGDGTTNAIQRPRL 4301
Query: 623 PFGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKI 675
+ KK N CG A ST K NA P + P YNHLQ+I
Sbjct: 4302 VAALQGKKINRVACGSAHTLAWSTSKPANAGKLPTQ-VPME-----YNHLQEI 4348
Score = 377 (137.8 bits), Expect = 4.7e-26, Sum P(3) = 4.7e-26
Identities = 104/338 (30%), Positives = 163/338 (48%)
Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
V+ + G + AA + + VF WG +LG + P E LS +NV V+ G
Sbjct: 2948 VRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 3005
Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC--GEWHT 381
A+T G++Y G +G +G S + +PR++ L V KVA G H
Sbjct: 3006 KSLFAVTVEGKVYACGEATNGRLGLGIS-SGTVPIPRQI-TALSNYVVKKVAVHSGGRHA 3063
Query: 382 AIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMV 441
++ G++F++G+G G LGH + N +P+ +E+L+ +++ +ACG H+AAI
Sbjct: 3064 MALTVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITS--- 3120
Query: 442 DRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRM--LTVGL 499
G+L+TWG + GRLGH D +L P V L+ +Q +CG T+ L
Sbjct: 3121 --------SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3172
Query: 500 TGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYT 559
T G V++ G G+LG ++ +I +L + V I G+ LT G V+T
Sbjct: 3173 TDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWT 3232
Query: 560 WGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGS 597
WGK +LG G P VE LR +++ V G+
Sbjct: 3233 WGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGA 3270
Score = 353 (129.3 bits), Expect = 9.5e-26, Sum P(3) = 9.5e-26
Identities = 100/347 (28%), Positives = 167/347 (48%)
Query: 290 KDGRLGHKV-NMDVSCPKLVECLSGINVQSVSCGE--FQTCALTKSGEIYTWGHNNHGAD 346
++GR+ + N D P+LV+ L+ N+ ++ AL+ +GE+++WG + G
Sbjct: 469 RNGRVYTQAYNSDTLGPQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGR- 527
Query: 347 LVGERRSRSHWLPRKLFDTLDGVRVSK----VACGEWHTAIVSTSGQLFTYGDGTFGVLG 402
+G + P KL L G + K +ACG ++A ++ G+L+T+G G +G LG
Sbjct: 528 -LGHGDTVPLEEP-KLISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLG 585
Query: 403 HGNLQNVSQPKEVESLRGLKVKSVACGPW--HTAAIVDIMVDRCKSNAIGGKLFTWGDAD 460
HG+ ++ + P V L+GLKV V+CG T A+ + G++++WGD D
Sbjct: 586 HGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTE-----------NGQVWSWGDGD 634
Query: 461 KGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK 520
G+LG + P + +L D D V+ CG ++ LT G+VYT G + +LG+
Sbjct: 635 YGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGT 694
Query: 521 AKD-RSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETP 579
+ R ++EG LK + V +++GS H LT V++WG N Q + P
Sbjct: 695 EEHVRYPKLLEG-LKGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRITKPEP 753
Query: 580 TFVEALRDRQVESVVCG--SSITAAICLHKSISVGDQSSCSQCRMPF 624
+ L + + + CG S + C SI + C M F
Sbjct: 754 AALPGLDTKHIVGIACGPAQSFAWSSCSEWSIGLRVPFVVDVCPMTF 800
Score = 344 (126.2 bits), Expect = 8.7e-25, Sum P(3) = 8.7e-25
Identities = 88/281 (31%), Positives = 136/281 (48%)
Query: 238 DGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAK--HAALVTKEGEVFCWGEGKDGRLG 295
+G V D L P+L++S ++ I+ + H ++ GEVF WG G GRLG
Sbjct: 470 NGRVYTQAYNSDTLGPQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLG 529
Query: 296 HKVNMDVSCPKLVECLSGI----NVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER 351
H + + PKL+ LSG +V ++CG + A+T GE+YTWG N+G +G
Sbjct: 530 HGDTVPLEEPKLISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGR--LGHG 587
Query: 352 RSRSHWLPRKLFDTLDGVRVSKVACG--EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV 409
S +P L L G++V V+CG + T V+ +GQ++++GDG +G LG G
Sbjct: 588 SSEDQTIPM-LVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGC 646
Query: 410 SQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDG 469
PK +E L+ L + V CG + A+ G+++TWG D RLGH
Sbjct: 647 KTPKLIEKLQDLDIVKVRCGSQFSIALTK-----------DGQVYTWGKGDNQRLGHGTE 695
Query: 470 ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
E P + L + + G + LT +V++ GS
Sbjct: 696 EHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGS 736
Score = 319 (117.4 bits), Expect = 1.4e-27, Sum P(3) = 1.4e-27
Identities = 78/221 (35%), Positives = 121/221 (54%)
Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
+V WG G GG +G + + K + AL K V+ +I+ G+ ++A +T
Sbjct: 516 EVFSWGCGD-GGRLGHGDTVPLEEPKL-ISALSGKQAGKHVV----HIACGSTYSAAITA 569
Query: 280 EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCG--EFQTCALTKSGEIYT 337
EGE++ WG G GRLGH + D + P LV L G+ V VSCG + QT A+T++G++++
Sbjct: 570 EGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWS 629
Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
WG ++G +G S P KL + L + + KV CG + ++ GQ++T+G G
Sbjct: 630 WGDGDYGK--LGRGGSDGCKTP-KLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGD 686
Query: 398 FGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVD 438
LGHG ++V PK +E L+G KV VA G H A+ +
Sbjct: 687 NQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTE 727
Score = 271 (100.5 bits), Expect = 3.5e-19, Sum P(3) = 3.5e-19
Identities = 79/274 (28%), Positives = 134/274 (48%)
Query: 332 SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
SG IY WGHN+ G L G ++ +P + L +R ++ GE V+ G+L+
Sbjct: 3956 SGTIYGWGHNHRG-QLGGIEGAKVK-VPTPC-EALATLRPVQLIGGEQTLFAVTADGKLY 4012
Query: 392 TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
G G G LG G ++VS P +ES++ + +K VA V+ C + + G
Sbjct: 4013 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVA---------VNSGGKHCLALSSEG 4063
Query: 452 KLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
++++WG+A+ G+LGH + P + L + V + G + +T G ++T G
Sbjct: 4064 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKG 4123
Query: 512 VHGQLGNPKAKDRSITVVEGKLKEEFVKGIS--SGSYHVAVLTSGGSVYTWGKNANGQLG 569
+G+LG+ ++D+ + L+ V I+ SG LT +V++WG G+LG
Sbjct: 4124 RYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4183
Query: 570 LGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
G S + P +++L D V V CGS + A+
Sbjct: 4184 RGGSDGCKVPMKIDSLTDLGVVKVECGSQFSVAL 4217
Score = 267 (99.0 bits), Expect = 1.3e-16, Sum P(3) = 1.3e-16
Identities = 93/342 (27%), Positives = 159/342 (46%)
Query: 282 EVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
EV WG +G K +VS P E L+ + V ++C E + L+++G +YT +N
Sbjct: 425 EVIAWG-----LIGWKYYANVSGPIQCEGLANLGVVQIACAEKRFLILSRNGRVYTQAYN 479
Query: 342 NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVL 401
+ D +G + +S R + V+++ + G + A+ S +G++F++G G G L
Sbjct: 480 S---DTLGPQLVQS-LASRNI------VKIAAHSDGHHYLAL-SANGEVFSWGCGDGGRL 528
Query: 402 GHGNLQNVSQPKEVESLRGLK----VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
GHG+ + +PK + +L G + V +ACG ++AAI + +G
Sbjct: 529 GHGDTVPLEEPKLISALSGKQAGKHVVHIACGSTYSAAIT------AEGELYTWGRGNYG 582
Query: 458 DADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG 517
G D +L T + L D V G T+ +T G+V++ G +G+LG
Sbjct: 583 RLGHG--SSEDQTIPMLVTGLKGLKVID-VSCGSGDAQTLAVTENGQVWSWGDGDYGKLG 639
Query: 518 NPKAKD-RSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQER 576
+ ++ ++E KL++ + + GS LT G VYTWGK N +LG G +
Sbjct: 640 RGGSDGCKTPKLIE-KLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHV 698
Query: 577 ETPTFVEALRDRQVESVVCGSSITAAICLHKSI-SVGDQSSC 617
P +E L+ ++V V GS+ A+ + S G C
Sbjct: 699 RYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQC 740
Score = 222 (83.2 bits), Expect = 2.7e-17, Sum P(3) = 2.7e-17
Identities = 66/216 (30%), Positives = 108/216 (50%)
Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAAL--V 277
++ WG G G +G GS S+++T +P L+ L V ++S G+ A V
Sbjct: 572 ELYTWGRGNYGR-LG---HGS-SEDQT-----IPMLVTGLKGLKVIDVSCGSGDAQTLAV 621
Query: 278 TKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
T+ G+V+ WG+G G+LG + PKL+E L +++ V CG + ALTK G++YT
Sbjct: 622 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYT 681
Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
WG ++ +G + H KL + L G +V VA G H ++ ++ ++G
Sbjct: 682 WGKGDN--QRLGHG-TEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSND 738
Query: 398 FGVLGHGNLQNVSQPKEVESLRGLKVK---SVACGP 430
H + +++P E +L GL K +ACGP
Sbjct: 739 --QCQHFDTLRITKP-EPAALPGLDTKHIVGIACGP 771
Score = 218 (81.8 bits), Expect = 1.3e-13, Sum P(3) = 1.3e-13
Identities = 73/232 (31%), Positives = 106/232 (45%)
Query: 378 EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
+W T SG ++ +G G LG V P E+L L+ + G A+
Sbjct: 3948 DW-TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4006
Query: 438 DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRL--VDFDFVQASCGRML 495
D GKL+ G GRLG E PT + + V V + G
Sbjct: 4007 ---AD--------GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKH 4055
Query: 496 TVGLTGLGKVYTMGSAVHGQLG--NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTS 553
+ L+ G+VY+ G A G+LG N DR V+E L+ V I++G H A +T+
Sbjct: 4056 CLALSSEGEVYSWGEAEDGKLGHGNRSPCDRP-RVIES-LRGIEVVDIAAGGAHSACITA 4113
Query: 554 GGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
G ++TWGK G+LG GDS+++ P VEAL+ +V + CGS +CL
Sbjct: 4114 AGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCL 4165
Score = 211 (79.3 bits), Expect = 9.7e-09, Sum P(3) = 9.7e-09
Identities = 58/192 (30%), Positives = 92/192 (47%)
Query: 198 ESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLE 257
+ +R++ GS + + D +W G GD G G K +P ++
Sbjct: 4146 QGYRVIDIACGSGDAQTLCLTDDDTVWSWG--DGDYGKLGRGGSDGCK------VPMKID 4197
Query: 258 SAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQ 317
S L V + G++ + +TK G V+ WG+G RLGH + V P+ V+ L G V
Sbjct: 4198 SLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4257
Query: 318 SVSCGEFQTCALTKSG--EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVA 375
+++ G T+ G E+YTWG N+ G +G+ + + PR L L G ++++VA
Sbjct: 4258 AIATGSLHCVCCTEDGLGEVYTWGDNDEGQ--LGDGTTNAIQRPR-LVAALQGKKINRVA 4314
Query: 376 CGEWHTAIVSTS 387
CG HT STS
Sbjct: 4315 CGSAHTLAWSTS 4326
Score = 206 (77.6 bits), Expect = 2.3e-12, Sum P(3) = 2.3e-12
Identities = 81/300 (27%), Positives = 126/300 (42%)
Query: 368 GVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVA 427
G V K A G A + T ++F +G LG + P E+L L V VA
Sbjct: 2945 GSLVRKKAAGLESAATIRT--KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVA 3002
Query: 428 CGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG-HVDGERKLLPTCVTRLVDFDF 486
G + ++ + V+ GK++ G+A GRLG + +P +T L ++
Sbjct: 3003 GG---SKSLFAVTVE--------GKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVV 3051
Query: 487 --VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGISS 543
V G + LT GK+++ G G+LG+ + ++E LK + ++ I+
Sbjct: 3052 KKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIAC 3110
Query: 544 GSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
GS H A +TS G +YTWG G+LG GD+ + P V+ L +V V CGS +
Sbjct: 3111 GSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3170
Query: 604 CLHKS---ISVGD-------QSSCSQCRMPFGFRRKKHN--CY-NCGLHFCSACSTKKII 650
L S GD + C +P R C CG F A + ++
Sbjct: 3171 ALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVV 3230
Score = 112 (44.5 bits), Expect = 1.4e-27, Sum P(3) = 1.4e-27
Identities = 54/216 (25%), Positives = 91/216 (42%)
Query: 400 VLGHGNLQNVSQPKEVE-SLRGLKVKSVA-CGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
V G +L N+ + K + + V ++ C +H ++I + +C+S+ I K+ G
Sbjct: 2855 VSGGSSLNNLIELKTININPTDTTVPLLSDCTEYHR--YIEIAIKQCRSSGIDCKIH--G 2910
Query: 458 DADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLG-------KVYTMGS 510
+ GR+ D + +P + + D +A+ G ++ GL KV+ G
Sbjct: 2911 LSILGRIRAEDEDLAAVPFLASDNEEEDDDKANTGSLVRKKAAGLESAATIRTKVFVWGL 2970
Query: 511 AVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGL 570
QLG K + L V ++ GS + +T G VY G+ NG+LGL
Sbjct: 2971 NDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGL 3030
Query: 571 GDSQER-ETPTFVEALRDRQVESVVCGSSITAAICL 605
G S P + AL + V+ V S A+ L
Sbjct: 3031 GISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMAL 3066
Score = 80 (33.2 bits), Expect = 3.5e-19, Sum P(3) = 3.5e-19
Identities = 21/89 (23%), Positives = 39/89 (43%)
Query: 246 TQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCP 305
T+ PKLLE V +++ G+ H +T++ EV WG + + + P
Sbjct: 694 TEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRITKPEP 753
Query: 306 KLVECLSGINVQSVSCGEFQTCALTKSGE 334
+ L ++ ++CG Q+ A + E
Sbjct: 754 AALPGLDTKHIVGIACGPAQSFAWSSCSE 782
Score = 59 (25.8 bits), Expect = 9.5e-26, Sum P(3) = 9.5e-26
Identities = 21/80 (26%), Positives = 32/80 (40%)
Query: 616 SCSQCRMPFGFRRKKHNCYNCG-LHFCSACSTKKIINASLTPNK-GKPSRVCDTCYNHLQ 673
+C C+M F + C NC FC C + N T + +P + C
Sbjct: 2711 TCDGCQM-FPINGPRFKCRNCDDFDFCETCFKTRKHNTRHTFGRINEPGQSPVFC----- 2764
Query: 674 KITHSGRLLKQENQSPRNLL 693
SG+ LK+ + S R +L
Sbjct: 2765 --GRSGKQLKRRHSSQRGML 2782
Score = 40 (19.1 bits), Expect = 2.0e-36, Sum P(3) = 2.0e-36
Identities = 18/61 (29%), Positives = 32/61 (52%)
Query: 868 RLHTLSEKISAAKEAKEGVDANLPPKLDTDKHPEVKLPKDRKVDSL-CSSPIVFSNKLKS 926
RLH E+++A +E G+ A + P P + L +++++ C SP + + LKS
Sbjct: 4645 RLHEFDEQVAAVRE---GM-ARVVPV------PLLSLFTGYELETMVCGSPDIPLHLLKS 4694
Query: 927 V 927
V
Sbjct: 4695 V 4695
Score = 39 (18.8 bits), Expect = 2.0e-36, Sum P(3) = 2.0e-36
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 11 GQKEKQLRLNSVTKIIMGQRTVNFQC 36
G QL+ V K+++G R + C
Sbjct: 3138 GDNTTQLKPKMV-KVLLGHRVIQVAC 3162
Score = 39 (18.8 bits), Expect = 1.1e-23, Sum P(3) = 1.1e-23
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 699 LSEEVKEEKGALTPSRGQSFTSKQS 723
++EEV+E + A S G T Q+
Sbjct: 2530 ITEEVEEAEAACPVSSGAVVTESQT 2554
Score = 37 (18.1 bits), Expect = 4.0e-36, Sum P(3) = 4.0e-36
Identities = 8/25 (32%), Positives = 13/25 (52%)
Query: 638 LHFCSACSTKKIINASLTPNKGKPS 662
+HFC + T +LT G+P+
Sbjct: 4792 IHFCKSIDTDDYARIALT---GEPA 4813
Score = 37 (18.1 bits), Expect = 3.9e-35, Sum P(3) = 3.9e-35
Identities = 10/26 (38%), Positives = 16/26 (61%)
Query: 251 LLPKLLESAVMLDVQNISLGAKHAAL 276
LLP+L+ S V+L +N L + A+
Sbjct: 1134 LLPELVVSIVLLLSKNAGLMQEAGAI 1159
Score = 37 (18.1 bits), Expect = 1.6e-22, Sum P(3) = 1.6e-22
Identities = 17/64 (26%), Positives = 30/64 (46%)
Query: 492 GR-MLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAV 550
GR +L+ L+G+G Y + + +L + +D + G+L + V SS Y
Sbjct: 3570 GRDVLSAVLSGMGTAYPQVADMLLELCVTELEDVATDSQSGRLSSQPVVVESSHPYTDDT 3629
Query: 551 LTSG 554
+SG
Sbjct: 3630 SSSG 3633
>UNIPROTKB|E1C8K2 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR009060 InterPro:IPR010606
Pfam:PF00173 Pfam:PF00569 Pfam:PF06701 PROSITE:PS01357
PROSITE:PS50135 PROSITE:PS50237 PROSITE:PS50255 PROSITE:PS51416
SMART:SM00119 SMART:SM00291 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0046872 GO:GO:0008270 GO:GO:0020037 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
SUPFAM:SSF46934 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 EMBL:AADN02017653 IPI:IPI00818548
Ensembl:ENSGALT00000036596 ArrayExpress:E1C8K2 Uniprot:E1C8K2
Length = 4841
Score = 471 (170.9 bits), Expect = 2.0e-36, Sum P(3) = 2.0e-36
Identities = 128/394 (32%), Positives = 197/394 (50%)
Query: 224 WGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEV 283
WG G +GG ++G+ + T +AL A + VQ I G + VT +G++
Sbjct: 3962 WGHNHRG-QLGG-IEGAKVKVPTPCEAL-------ATLRPVQLIG-GEQTLFAVTADGKL 4011
Query: 284 FCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGHN 341
+ G G GRLG VS P L+E + + ++ +V+ G AL+ GE+Y+WG
Sbjct: 4012 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEA 4071
Query: 342 NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVL 401
G G R PR + ++L G+ V +A G H+A ++ +G LFT+G G +G L
Sbjct: 4072 EDGKLGHGNRSPCDR--PR-VIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRL 4128
Query: 402 GHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADK 461
GHG+ ++ +PK VE+L+G +V +ACG + C ++ +++WGD D
Sbjct: 4129 GHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTL-------CLTD--DDTVWSWGDGDY 4179
Query: 462 GRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA 521
G+LG + +P + L D V+ CG +V LT G VYT G + +LG+
Sbjct: 4180 GKLGRGGSDGCKVPMKIDSLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD 4239
Query: 522 KD-RSITVVEGKLKEEFVKGISSGSYHVAVLTSGG--SVYTWGKNANGQLGLGDSQERET 578
R V+G L+ + V I++GS H T G VYTWG N GQLG G + +
Sbjct: 4240 DHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGLGEVYTWGDNDEGQLGDGTTNAIQR 4298
Query: 579 PTFVEALRDRQVESVVCGSSITAAICLHKSISVG 612
P V AL+ +++ V CGS+ T A K + G
Sbjct: 4299 PRLVAALQGKKINRVACGSAHTLAWSTSKPANAG 4332
Score = 461 (167.3 bits), Expect = 3.9e-35, Sum P(3) = 3.9e-35
Identities = 118/355 (33%), Positives = 182/355 (51%)
Query: 252 LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMD-VSCPKLVEC 310
+P E+ L+V ++ G+K VT EG+V+ GE +GRLG ++ V P+ +
Sbjct: 2986 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITA 3045
Query: 311 LSGINVQSVSC--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
LS V+ V+ G ALT G+I++WG + G +G SR + +L + L
Sbjct: 3046 LSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGK--LGHF-SRMNCDKPRLIEALKT 3102
Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
R+ +ACG H+A +++SG+L+T+G G +G LGHG+ +PK V+ L G +V VAC
Sbjct: 3103 KRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 3162
Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ 488
G + + D G +F+WGD D G+LG E +P + RL Q
Sbjct: 3163 GSRDAQTLA--LTDE-------GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQ 3213
Query: 489 ASCGRMLTVGLTGLGKVYTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGISSGSYH 547
CG ++ LT G V+T G + +LG+ R VVEG L+ + + ++ G+ H
Sbjct: 3214 IECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEG-LRGKKIVHVAVGALH 3272
Query: 548 VAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
+T G VY WG N +GQ G G + PT V+ L +++ V CGSS + A
Sbjct: 3273 CLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3327
Score = 410 (149.4 bits), Expect = 2.1e-31, Sum P(2) = 2.1e-31
Identities = 102/325 (31%), Positives = 164/325 (50%)
Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISL--GAKHAALVTKEGEVFCWGEGKD 291
G A +G + + +P+ + + V+ +++ G +HA +T +G++F WGEG D
Sbjct: 3021 GEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDD 3080
Query: 292 GRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER 351
G+LGH M+ P+L+E L ++ ++CG + A+T SGE+YTWG +G +G
Sbjct: 3081 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGR--LGHG 3138
Query: 352 RSRSHWLPRKLFDTLDGVRVSKVACG--EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV 409
+ + P K+ L G RV +VACG + T ++ G +F++GDG FG LG G +
Sbjct: 3139 DNTTQLKP-KMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 3197
Query: 410 SQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDG 469
+ P+ +E L G V + CG + A+ KS G ++TWG D RLGH
Sbjct: 3198 NIPQNIERLNGQGVCQIECGAQFSLALT-------KS----GVVWTWGKGDYFRLGHGTD 3246
Query: 470 ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAK-DRSITV 528
P V L V + G + + +T G+VY G HGQ GN +R T+
Sbjct: 3247 VHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTL 3306
Query: 529 VEGKLKEEFVKGISSGSYHVAVLTS 553
V+G L+ + + ++ GS H T+
Sbjct: 3307 VQG-LEGQKITRVACGSSHSVAWTT 3330
Score = 390 (142.3 bits), Expect = 1.2e-27, Sum P(3) = 1.2e-27
Identities = 122/413 (29%), Positives = 184/413 (44%)
Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
G ++ WG G+LG V P E L+ + + GE A+T G++Y G+
Sbjct: 3957 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4016
Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC--GEWHTAIVSTSGQLFTYGDGTF 398
G +G S S P L +++ V + KVA G H +S+ G+++++G+
Sbjct: 4017 GAGGRLGIGGTESVS--TPT-LLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4073
Query: 399 GVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
G LGHGN +P+ +ESLRG++V +A G H+A I G LFTWG
Sbjct: 4074 GKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACIT-----------AAGDLFTWGK 4122
Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAVHGQL 516
GRLGH D E +L P V L + + +CG T+ LT V++ G +G+L
Sbjct: 4123 GRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKL 4182
Query: 517 GNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQER 576
G + + + L + V + GS LT G+VYTWGK +LG G
Sbjct: 4183 GRGGSDGCKVPMKIDSLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV 4242
Query: 577 ETPTFVEALRDRQVESVVCGSSITAAICLHKSIS------------VGD--QSSCSQCRM 622
P V+ L+ ++V ++ GS + C + +GD ++ + R+
Sbjct: 4243 RRPRQVQGLQGKKVIAIATGS-LHCVCCTEDGLGEVYTWGDNDEGQLGDGTTNAIQRPRL 4301
Query: 623 PFGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKI 675
+ KK N CG A ST K NA P + P YNHLQ+I
Sbjct: 4302 VAALQGKKINRVACGSAHTLAWSTSKPANAGKLPTQ-VPME-----YNHLQEI 4348
Score = 377 (137.8 bits), Expect = 4.7e-26, Sum P(3) = 4.7e-26
Identities = 104/338 (30%), Positives = 163/338 (48%)
Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
V+ + G + AA + + VF WG +LG + P E LS +NV V+ G
Sbjct: 2948 VRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 3005
Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC--GEWHT 381
A+T G++Y G +G +G S + +PR++ L V KVA G H
Sbjct: 3006 KSLFAVTVEGKVYACGEATNGRLGLGIS-SGTVPIPRQI-TALSNYVVKKVAVHSGGRHA 3063
Query: 382 AIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMV 441
++ G++F++G+G G LGH + N +P+ +E+L+ +++ +ACG H+AAI
Sbjct: 3064 MALTVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITS--- 3120
Query: 442 DRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRM--LTVGL 499
G+L+TWG + GRLGH D +L P V L+ +Q +CG T+ L
Sbjct: 3121 --------SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3172
Query: 500 TGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYT 559
T G V++ G G+LG ++ +I +L + V I G+ LT G V+T
Sbjct: 3173 TDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWT 3232
Query: 560 WGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGS 597
WGK +LG G P VE LR +++ V G+
Sbjct: 3233 WGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGA 3270
Score = 353 (129.3 bits), Expect = 9.5e-26, Sum P(3) = 9.5e-26
Identities = 100/347 (28%), Positives = 167/347 (48%)
Query: 290 KDGRLGHKV-NMDVSCPKLVECLSGINVQSVSCGE--FQTCALTKSGEIYTWGHNNHGAD 346
++GR+ + N D P+LV+ L+ N+ ++ AL+ +GE+++WG + G
Sbjct: 469 RNGRVYTQAYNSDTLGPQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGR- 527
Query: 347 LVGERRSRSHWLPRKLFDTLDGVRVSK----VACGEWHTAIVSTSGQLFTYGDGTFGVLG 402
+G + P KL L G + K +ACG ++A ++ G+L+T+G G +G LG
Sbjct: 528 -LGHGDTVPLEEP-KLISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLG 585
Query: 403 HGNLQNVSQPKEVESLRGLKVKSVACGPW--HTAAIVDIMVDRCKSNAIGGKLFTWGDAD 460
HG+ ++ + P V L+GLKV V+CG T A+ + G++++WGD D
Sbjct: 586 HGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTE-----------NGQVWSWGDGD 634
Query: 461 KGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK 520
G+LG + P + +L D D V+ CG ++ LT G+VYT G + +LG+
Sbjct: 635 YGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGT 694
Query: 521 AKD-RSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETP 579
+ R ++EG LK + V +++GS H LT V++WG N Q + P
Sbjct: 695 EEHVRYPKLLEG-LKGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRITKPEP 753
Query: 580 TFVEALRDRQVESVVCG--SSITAAICLHKSISVGDQSSCSQCRMPF 624
+ L + + + CG S + C SI + C M F
Sbjct: 754 AALPGLDTKHIVGIACGPAQSFAWSSCSEWSIGLRVPFVVDVCPMTF 800
Score = 344 (126.2 bits), Expect = 8.7e-25, Sum P(3) = 8.7e-25
Identities = 88/281 (31%), Positives = 136/281 (48%)
Query: 238 DGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAK--HAALVTKEGEVFCWGEGKDGRLG 295
+G V D L P+L++S ++ I+ + H ++ GEVF WG G GRLG
Sbjct: 470 NGRVYTQAYNSDTLGPQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLG 529
Query: 296 HKVNMDVSCPKLVECLSGI----NVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER 351
H + + PKL+ LSG +V ++CG + A+T GE+YTWG N+G +G
Sbjct: 530 HGDTVPLEEPKLISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGR--LGHG 587
Query: 352 RSRSHWLPRKLFDTLDGVRVSKVACG--EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV 409
S +P L L G++V V+CG + T V+ +GQ++++GDG +G LG G
Sbjct: 588 SSEDQTIPM-LVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGC 646
Query: 410 SQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDG 469
PK +E L+ L + V CG + A+ G+++TWG D RLGH
Sbjct: 647 KTPKLIEKLQDLDIVKVRCGSQFSIALTK-----------DGQVYTWGKGDNQRLGHGTE 695
Query: 470 ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
E P + L + + G + LT +V++ GS
Sbjct: 696 EHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGS 736
Score = 319 (117.4 bits), Expect = 1.4e-27, Sum P(3) = 1.4e-27
Identities = 78/221 (35%), Positives = 121/221 (54%)
Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
+V WG G GG +G + + K + AL K V+ +I+ G+ ++A +T
Sbjct: 516 EVFSWGCGD-GGRLGHGDTVPLEEPKL-ISALSGKQAGKHVV----HIACGSTYSAAITA 569
Query: 280 EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCG--EFQTCALTKSGEIYT 337
EGE++ WG G GRLGH + D + P LV L G+ V VSCG + QT A+T++G++++
Sbjct: 570 EGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWS 629
Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
WG ++G +G S P KL + L + + KV CG + ++ GQ++T+G G
Sbjct: 630 WGDGDYGK--LGRGGSDGCKTP-KLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGD 686
Query: 398 FGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVD 438
LGHG ++V PK +E L+G KV VA G H A+ +
Sbjct: 687 NQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTE 727
Score = 271 (100.5 bits), Expect = 3.5e-19, Sum P(3) = 3.5e-19
Identities = 79/274 (28%), Positives = 134/274 (48%)
Query: 332 SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
SG IY WGHN+ G L G ++ +P + L +R ++ GE V+ G+L+
Sbjct: 3956 SGTIYGWGHNHRG-QLGGIEGAKVK-VPTPC-EALATLRPVQLIGGEQTLFAVTADGKLY 4012
Query: 392 TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
G G G LG G ++VS P +ES++ + +K VA V+ C + + G
Sbjct: 4013 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVA---------VNSGGKHCLALSSEG 4063
Query: 452 KLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
++++WG+A+ G+LGH + P + L + V + G + +T G ++T G
Sbjct: 4064 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKG 4123
Query: 512 VHGQLGNPKAKDRSITVVEGKLKEEFVKGIS--SGSYHVAVLTSGGSVYTWGKNANGQLG 569
+G+LG+ ++D+ + L+ V I+ SG LT +V++WG G+LG
Sbjct: 4124 RYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4183
Query: 570 LGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
G S + P +++L D V V CGS + A+
Sbjct: 4184 RGGSDGCKVPMKIDSLTDLGVVKVECGSQFSVAL 4217
Score = 267 (99.0 bits), Expect = 1.3e-16, Sum P(3) = 1.3e-16
Identities = 93/342 (27%), Positives = 159/342 (46%)
Query: 282 EVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
EV WG +G K +VS P E L+ + V ++C E + L+++G +YT +N
Sbjct: 425 EVIAWG-----LIGWKYYANVSGPIQCEGLANLGVVQIACAEKRFLILSRNGRVYTQAYN 479
Query: 342 NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVL 401
+ D +G + +S R + V+++ + G + A+ S +G++F++G G G L
Sbjct: 480 S---DTLGPQLVQS-LASRNI------VKIAAHSDGHHYLAL-SANGEVFSWGCGDGGRL 528
Query: 402 GHGNLQNVSQPKEVESLRGLK----VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
GHG+ + +PK + +L G + V +ACG ++AAI + +G
Sbjct: 529 GHGDTVPLEEPKLISALSGKQAGKHVVHIACGSTYSAAIT------AEGELYTWGRGNYG 582
Query: 458 DADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG 517
G D +L T + L D V G T+ +T G+V++ G +G+LG
Sbjct: 583 RLGHG--SSEDQTIPMLVTGLKGLKVID-VSCGSGDAQTLAVTENGQVWSWGDGDYGKLG 639
Query: 518 NPKAKD-RSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQER 576
+ ++ ++E KL++ + + GS LT G VYTWGK N +LG G +
Sbjct: 640 RGGSDGCKTPKLIE-KLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHV 698
Query: 577 ETPTFVEALRDRQVESVVCGSSITAAICLHKSI-SVGDQSSC 617
P +E L+ ++V V GS+ A+ + S G C
Sbjct: 699 RYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQC 740
Score = 222 (83.2 bits), Expect = 2.7e-17, Sum P(3) = 2.7e-17
Identities = 66/216 (30%), Positives = 108/216 (50%)
Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAAL--V 277
++ WG G G +G GS S+++T +P L+ L V ++S G+ A V
Sbjct: 572 ELYTWGRGNYGR-LG---HGS-SEDQT-----IPMLVTGLKGLKVIDVSCGSGDAQTLAV 621
Query: 278 TKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
T+ G+V+ WG+G G+LG + PKL+E L +++ V CG + ALTK G++YT
Sbjct: 622 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYT 681
Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
WG ++ +G + H KL + L G +V VA G H ++ ++ ++G
Sbjct: 682 WGKGDN--QRLGHG-TEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSND 738
Query: 398 FGVLGHGNLQNVSQPKEVESLRGLKVK---SVACGP 430
H + +++P E +L GL K +ACGP
Sbjct: 739 --QCQHFDTLRITKP-EPAALPGLDTKHIVGIACGP 771
Score = 218 (81.8 bits), Expect = 1.3e-13, Sum P(3) = 1.3e-13
Identities = 73/232 (31%), Positives = 106/232 (45%)
Query: 378 EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
+W T SG ++ +G G LG V P E+L L+ + G A+
Sbjct: 3948 DW-TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4006
Query: 438 DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRL--VDFDFVQASCGRML 495
D GKL+ G GRLG E PT + + V V + G
Sbjct: 4007 ---AD--------GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKH 4055
Query: 496 TVGLTGLGKVYTMGSAVHGQLG--NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTS 553
+ L+ G+VY+ G A G+LG N DR V+E L+ V I++G H A +T+
Sbjct: 4056 CLALSSEGEVYSWGEAEDGKLGHGNRSPCDRP-RVIES-LRGIEVVDIAAGGAHSACITA 4113
Query: 554 GGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
G ++TWGK G+LG GDS+++ P VEAL+ +V + CGS +CL
Sbjct: 4114 AGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCL 4165
Score = 211 (79.3 bits), Expect = 9.7e-09, Sum P(3) = 9.7e-09
Identities = 58/192 (30%), Positives = 92/192 (47%)
Query: 198 ESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLE 257
+ +R++ GS + + D +W G GD G G K +P ++
Sbjct: 4146 QGYRVIDIACGSGDAQTLCLTDDDTVWSWG--DGDYGKLGRGGSDGCK------VPMKID 4197
Query: 258 SAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQ 317
S L V + G++ + +TK G V+ WG+G RLGH + V P+ V+ L G V
Sbjct: 4198 SLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4257
Query: 318 SVSCGEFQTCALTKSG--EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVA 375
+++ G T+ G E+YTWG N+ G +G+ + + PR L L G ++++VA
Sbjct: 4258 AIATGSLHCVCCTEDGLGEVYTWGDNDEGQ--LGDGTTNAIQRPR-LVAALQGKKINRVA 4314
Query: 376 CGEWHTAIVSTS 387
CG HT STS
Sbjct: 4315 CGSAHTLAWSTS 4326
Score = 206 (77.6 bits), Expect = 2.3e-12, Sum P(3) = 2.3e-12
Identities = 81/300 (27%), Positives = 126/300 (42%)
Query: 368 GVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVA 427
G V K A G A + T ++F +G LG + P E+L L V VA
Sbjct: 2945 GSLVRKKAAGLESAATIRT--KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVA 3002
Query: 428 CGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG-HVDGERKLLPTCVTRLVDFDF 486
G + ++ + V+ GK++ G+A GRLG + +P +T L ++
Sbjct: 3003 GG---SKSLFAVTVE--------GKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVV 3051
Query: 487 --VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGISS 543
V G + LT GK+++ G G+LG+ + ++E LK + ++ I+
Sbjct: 3052 KKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIAC 3110
Query: 544 GSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
GS H A +TS G +YTWG G+LG GD+ + P V+ L +V V CGS +
Sbjct: 3111 GSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3170
Query: 604 CLHKS---ISVGD-------QSSCSQCRMPFGFRRKKHN--CY-NCGLHFCSACSTKKII 650
L S GD + C +P R C CG F A + ++
Sbjct: 3171 ALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVV 3230
Score = 112 (44.5 bits), Expect = 1.4e-27, Sum P(3) = 1.4e-27
Identities = 54/216 (25%), Positives = 91/216 (42%)
Query: 400 VLGHGNLQNVSQPKEVE-SLRGLKVKSVA-CGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
V G +L N+ + K + + V ++ C +H ++I + +C+S+ I K+ G
Sbjct: 2855 VSGGSSLNNLIELKTININPTDTTVPLLSDCTEYHR--YIEIAIKQCRSSGIDCKIH--G 2910
Query: 458 DADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLG-------KVYTMGS 510
+ GR+ D + +P + + D +A+ G ++ GL KV+ G
Sbjct: 2911 LSILGRIRAEDEDLAAVPFLASDNEEEDDDKANTGSLVRKKAAGLESAATIRTKVFVWGL 2970
Query: 511 AVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGL 570
QLG K + L V ++ GS + +T G VY G+ NG+LGL
Sbjct: 2971 NDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGL 3030
Query: 571 GDSQER-ETPTFVEALRDRQVESVVCGSSITAAICL 605
G S P + AL + V+ V S A+ L
Sbjct: 3031 GISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMAL 3066
Score = 80 (33.2 bits), Expect = 3.5e-19, Sum P(3) = 3.5e-19
Identities = 21/89 (23%), Positives = 39/89 (43%)
Query: 246 TQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCP 305
T+ PKLLE V +++ G+ H +T++ EV WG + + + P
Sbjct: 694 TEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRITKPEP 753
Query: 306 KLVECLSGINVQSVSCGEFQTCALTKSGE 334
+ L ++ ++CG Q+ A + E
Sbjct: 754 AALPGLDTKHIVGIACGPAQSFAWSSCSE 782
Score = 59 (25.8 bits), Expect = 9.5e-26, Sum P(3) = 9.5e-26
Identities = 21/80 (26%), Positives = 32/80 (40%)
Query: 616 SCSQCRMPFGFRRKKHNCYNCG-LHFCSACSTKKIINASLTPNK-GKPSRVCDTCYNHLQ 673
+C C+M F + C NC FC C + N T + +P + C
Sbjct: 2711 TCDGCQM-FPINGPRFKCRNCDDFDFCETCFKTRKHNTRHTFGRINEPGQSPVFC----- 2764
Query: 674 KITHSGRLLKQENQSPRNLL 693
SG+ LK+ + S R +L
Sbjct: 2765 --GRSGKQLKRRHSSQRGML 2782
Score = 40 (19.1 bits), Expect = 2.0e-36, Sum P(3) = 2.0e-36
Identities = 18/61 (29%), Positives = 32/61 (52%)
Query: 868 RLHTLSEKISAAKEAKEGVDANLPPKLDTDKHPEVKLPKDRKVDSL-CSSPIVFSNKLKS 926
RLH E+++A +E G+ A + P P + L +++++ C SP + + LKS
Sbjct: 4645 RLHEFDEQVAAVRE---GM-ARVVPV------PLLSLFTGYELETMVCGSPDIPLHLLKS 4694
Query: 927 V 927
V
Sbjct: 4695 V 4695
Score = 39 (18.8 bits), Expect = 2.0e-36, Sum P(3) = 2.0e-36
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 11 GQKEKQLRLNSVTKIIMGQRTVNFQC 36
G QL+ V K+++G R + C
Sbjct: 3138 GDNTTQLKPKMV-KVLLGHRVIQVAC 3162
Score = 39 (18.8 bits), Expect = 1.1e-23, Sum P(3) = 1.1e-23
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 699 LSEEVKEEKGALTPSRGQSFTSKQS 723
++EEV+E + A S G T Q+
Sbjct: 2530 ITEEVEEAEAACPVSSGAVVTESQT 2554
Score = 37 (18.1 bits), Expect = 4.0e-36, Sum P(3) = 4.0e-36
Identities = 8/25 (32%), Positives = 13/25 (52%)
Query: 638 LHFCSACSTKKIINASLTPNKGKPS 662
+HFC + T +LT G+P+
Sbjct: 4792 IHFCKSIDTDDYARIALT---GEPA 4813
Score = 37 (18.1 bits), Expect = 3.9e-35, Sum P(3) = 3.9e-35
Identities = 10/26 (38%), Positives = 16/26 (61%)
Query: 251 LLPKLLESAVMLDVQNISLGAKHAAL 276
LLP+L+ S V+L +N L + A+
Sbjct: 1134 LLPELVVSIVLLLSKNAGLMQEAGAI 1159
Score = 37 (18.1 bits), Expect = 1.6e-22, Sum P(3) = 1.6e-22
Identities = 17/64 (26%), Positives = 30/64 (46%)
Query: 492 GR-MLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAV 550
GR +L+ L+G+G Y + + +L + +D + G+L + V SS Y
Sbjct: 3570 GRDVLSAVLSGMGTAYPQVADMLLELCVTELEDVATDSQSGRLSSQPVVVESSHPYTDDT 3629
Query: 551 LTSG 554
+SG
Sbjct: 3630 SSSG 3633
>FB|FBgn0031107 [details] [associations]
symbol:HERC2 "HECT and RLD domain containing protein 2
ortholog (H. sapiens)" species:7227 "Drosophila melanogaster"
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=NAS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA;NAS] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0020037 "heme binding" evidence=IEA] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IBA] [GO:0005737 "cytoplasm" evidence=IBA]
[GO:0005634 "nucleus" evidence=IBA] Pfam:PF00632 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR009060 InterPro:IPR010606
Pfam:PF00173 Pfam:PF06701 PROSITE:PS50237 PROSITE:PS51416
SMART:SM00119 UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005737 GO:GO:0005814 GO:GO:0046872
EMBL:AE014298 GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 InterPro:IPR015940 PROSITE:PS50030
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939
PROSITE:PS51284 InterPro:IPR000859 SUPFAM:SSF49854 GO:GO:0042787
SUPFAM:SSF46934 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00700000104208 EMBL:AY113293 EMBL:AF189221
RefSeq:NP_608388.2 UniGene:Dm.3302 ProteinModelPortal:Q9VR91
SMR:Q9VR91 IntAct:Q9VR91 STRING:Q9VR91 PaxDb:Q9VR91
EnsemblMetazoa:FBtr0301344 GeneID:33035 KEGG:dme:Dmel_CG11734
UCSC:CG11734-RB CTD:8924 FlyBase:FBgn0031107 InParanoid:Q9VR91
KO:K10595 OMA:QLAFTRD OrthoDB:EOG48GTJ3 PhylomeDB:Q9VR91
GenomeRNAi:33035 NextBio:781623 Bgee:Q9VR91 GermOnline:CG11734
Uniprot:Q9VR91
Length = 4912
Score = 454 (164.9 bits), Expect = 2.3e-36, Sum P(2) = 2.3e-36
Identities = 113/357 (31%), Positives = 177/357 (49%)
Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
P E+ +L ++ G + VT +G++F G G GRLG + + P L+ L
Sbjct: 4073 PTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQ 4132
Query: 313 GINVQ--SVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR 370
+ V+ +V+ G ALT GE+Y WG G +G S+ P KL + L+G+
Sbjct: 4133 HVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGK--LGHGNRMSYDRP-KLVEHLNGMS 4189
Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
V+ +ACG H+A ++ SG + T+G G +G LGHG+ ++ +PK VE+L G + +ACG
Sbjct: 4190 VADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGS 4249
Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQAS 490
+ C ++ +++WGD D G+LG + LP + L V+
Sbjct: 4250 GDAQTL-------CITD--DDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVE 4300
Query: 491 CGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----KDRSITVVEGKLKEEFVKGISSGSY 546
CG +V LT G VYT G +LG+ + + + ++GK + I++GS
Sbjct: 4301 CGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKK----IISIATGSL 4356
Query: 547 HVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
H + G VYTWG N GQLG G + P V AL+ + + V CGS+ T A+
Sbjct: 4357 HCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLAL 4413
Score = 437 (158.9 bits), Expect = 1.6e-34, Sum P(2) = 1.6e-34
Identities = 125/401 (31%), Positives = 193/401 (48%)
Query: 252 LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECL 311
+P ++ L +I+ G+K +V+++G+V+ GEG +GRLG V +V P + L
Sbjct: 3009 VPTFSQTISRLRPIHIAGGSKSLFIVSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVL 3068
Query: 312 SGINVQSVSC--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGV 369
V+ V+ G ALT G++++WG G G R + PR L + L
Sbjct: 3069 RQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDK--PR-LVEALRAK 3125
Query: 370 RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACG 429
++ VACG H+A +S+ G+L+T+G G +G LGHG+ +PK V +L G +V VACG
Sbjct: 3126 KIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNTTQLKPKLVTALAGRRVVQVACG 3185
Query: 430 PWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQA 489
A + + D G +F+WGD D G+LG E P + RL VQ
Sbjct: 3186 S-RDAQTLALTED--------GAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQI 3236
Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVE--GKLKEEFVKGISSGSYH 547
CG ++ LT G+V+T G + +LG+ D+ + + G L+ V ++ G+ H
Sbjct: 3237 ECGAQFSLALTRAGEVWTWGKGDYYRLGH--GGDQHVRKPQPIGGLRGRRVIHVAVGALH 3294
Query: 548 VAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHK 607
+T G VY WG N +GQ G G++ + P V L V V CGSS + A L
Sbjct: 3295 CLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSIAWGLPN 3354
Query: 608 SISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKK 648
+ S D+ +PF R + G++ T K
Sbjct: 3355 ASS--DEEKRGP--VPFSSTRDPLGGSSLGIYEAETMQTLK 3391
Score = 419 (152.6 bits), Expect = 1.4e-32, Sum P(2) = 1.4e-32
Identities = 108/312 (34%), Positives = 159/312 (50%)
Query: 252 LPKLLESAVMLDVQNISL--GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVE 309
+P LL S + V+ +++ G KH +T EGEV+ WGEG+DG+LGH M PKLVE
Sbjct: 4124 IPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVE 4183
Query: 310 CLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGV 369
L+G++V ++CG + A+T SG + TWG +G +G S P KL + L G
Sbjct: 4184 HLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGR--LGHGDSEDQLRP-KLVEALLGY 4240
Query: 370 RVSKVACG--EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVA 427
R +ACG + T ++ ++++GDG +G LG G P ++ESL GL V V
Sbjct: 4241 RAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVE 4300
Query: 428 CGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGH--VDGERKLLPTCVTRLVDFD 485
CG + A+ KS A+ +TWG D RLGH VD R+ P V L
Sbjct: 4301 CGSQFSVALT-------KSGAV----YTWGKGDFHRLGHGSVDHVRR--PKKVAALQGKK 4347
Query: 486 FVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----KDRSITVVEGKLKEEFVKGI 541
+ + G + V + G+VYT G GQLG+ + R + ++GK VK +
Sbjct: 4348 IISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGK---HIVK-V 4403
Query: 542 SSGSYHVAVLTS 553
+ GS H L++
Sbjct: 4404 TCGSAHTLALST 4415
Score = 368 (134.6 bits), Expect = 5.4e-26, Sum P(3) = 5.4e-26
Identities = 100/319 (31%), Positives = 148/319 (46%)
Query: 283 VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN 342
++ WG G+LG + P E LS + ++ GE A+T G+++ G+ +
Sbjct: 4051 IYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGYGS 4110
Query: 343 HGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC--GEWHTAIVSTSGQLFTYGDGTFGV 400
G VG S W L +L V V KVA G H ++T G+++ +G+G G
Sbjct: 4111 GGRLGVGGSDS---WAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGK 4167
Query: 401 LGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDAD 460
LGHGN + +PK VE L G+ V +ACG H+AAI G + TWG
Sbjct: 4168 LGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAIT-----------ASGHVLTWGKGR 4216
Query: 461 KGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAVHGQLGN 518
GRLGH D E +L P V L+ + + +CG T+ +T V++ G +G+LG
Sbjct: 4217 YGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGR 4276
Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET 578
+ + L V + GS LT G+VYTWGK +LG G
Sbjct: 4277 GGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRR 4336
Query: 579 PTFVEALRDRQVESVVCGS 597
P V AL+ +++ S+ GS
Sbjct: 4337 PKKVAALQGKKIISIATGS 4355
Score = 346 (126.9 bits), Expect = 1.2e-23, Sum P(3) = 1.2e-23
Identities = 101/319 (31%), Positives = 150/319 (47%)
Query: 283 VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN 342
V WG +LG V P + +S + ++ G +++ G++Y G
Sbjct: 2988 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFIVSQDGKVYACGEGT 3047
Query: 343 HGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC--GEWHTAIVSTSGQLFTYGDGTFGV 400
+G +G + + LP +L L V KVA G H ++ G++F++G+G G
Sbjct: 3048 NGR--LGLGVTHNVPLPHQL-PVLRQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGK 3104
Query: 401 LGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDAD 460
LGHGN + +P+ VE+LR K++ VACG H+AAI S+ G+L+TWG +
Sbjct: 3105 LGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAI---------SSQ--GELYTWGLGE 3153
Query: 461 KGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRM--LTVGLTGLGKVYTMGSAVHGQLGN 518
GRLGH D +L P VT L VQ +CG T+ LT G V++ G G+LG
Sbjct: 3154 YGRLGHGDNTTQLKPKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGR 3213
Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET 578
++ +L V I G+ LT G V+TWGK +LG G Q
Sbjct: 3214 GGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRK 3273
Query: 579 PTFVEALRDRQVESVVCGS 597
P + LR R+V V G+
Sbjct: 3274 PQPIGGLRGRRVIHVAVGA 3292
Score = 273 (101.2 bits), Expect = 5.9e-17, Sum P(2) = 5.9e-17
Identities = 64/190 (33%), Positives = 98/190 (51%)
Query: 249 DALLPKLLESAVMLDVQNISLGAKHAAL--VTKEGEVFCWGEGKDGRLGHKVNMDVSCPK 306
D L PKL+E+ + +I+ G+ A +T + V+ WG+G G+LG + P
Sbjct: 4227 DQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPY 4286
Query: 307 LVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTL 366
+E L+G+ V V CG + ALTKSG +YTWG + +G S H K L
Sbjct: 4287 KIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHR--LGHG-SVDHVRRPKKVAAL 4343
Query: 367 DGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSV 426
G ++ +A G H S SG+++T+GD G LG G + + +P+ V +L+G + V
Sbjct: 4344 QGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKV 4403
Query: 427 ACGPWHTAAI 436
CG HT A+
Sbjct: 4404 TCGSAHTLAL 4413
Score = 241 (89.9 bits), Expect = 6.2e-12, Sum P(3) = 6.2e-12
Identities = 83/300 (27%), Positives = 133/300 (44%)
Query: 316 VQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVA 375
++ V+C E Q L++ G++YTW R ++ P + + V +S
Sbjct: 574 IKQVACCETQMLILSQEGKLYTW------------RLAKPEAEPLPMEEVAHDVFISIAG 621
Query: 376 -CGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTA 434
C H + ++ +++G G LGHG+ + P ++ +L V+SV CG ++A
Sbjct: 622 HCEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSA 681
Query: 435 AIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR- 493
AI C GG L TWG RLGH + + + LPT V L D V + G
Sbjct: 682 AIT------C-----GGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSG 730
Query: 494 -MLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLT 552
++ LT G V+ G +G+LGN ++ L V+ + +GS L+
Sbjct: 731 DAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESLPR--VQRVFAGSQFSVALS 788
Query: 553 SGGSVYTWGKNA--NGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSIS 610
S G +YTWGK QL Q P V +L+ +++ V +++ A CL S S
Sbjct: 789 SEGQLYTWGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDV----AVSVAHCLALSSS 844
Score = 223 (83.6 bits), Expect = 4.6e-10, Sum P(3) = 4.6e-10
Identities = 79/280 (28%), Positives = 123/280 (43%)
Query: 328 ALTKSGEIYTWGHNNHGAD-LVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVST 386
A+ + Y+WG G D +G + + +P K+ L+ V V CG ++A ++
Sbjct: 630 AIDSNHNAYSWGT---GEDHRLGHGDTHARAVPTKIA-ALEQHCVQSVYCGCSYSAAITC 685
Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPW--HTAAIVDIMVDRC 444
G L T+G GT+ LGHGN + S P V +L V VA G H+ A+
Sbjct: 686 GGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTS------ 739
Query: 445 KSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
G +F WGD D G+LG+ + L P V L V A G +V L+ G+
Sbjct: 740 -----EGLVFAWGDGDYGKLGNGNCNGSLQPILVESLPRVQRVFA--GSQFSVALSSEGQ 792
Query: 505 VYTMGSAV---HGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWG 561
+YT G A H QL + S+ + L+ + + ++ H L+S G V+ WG
Sbjct: 793 LYTWGKATCLGH-QLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWG 851
Query: 562 KNANGQL---GLGDSQERETPTFVEALRDRQVESVVCGSS 598
+N + Q+ + TP V +L + C S+
Sbjct: 852 RNDSQQICPASVSSEPLLRTPILV-SLPTFPASGIACTSA 890
Score = 222 (83.2 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 60/169 (35%), Positives = 82/169 (48%)
Query: 220 DVMIWGEGVLGGDIG-GAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVT 278
+V WG+G G +G G DG LP +ES L V + G++ + +T
Sbjct: 4262 NVWSWGDGDYG-KLGRGGSDG----------CKLPYKIESLAGLGVVKVECGSQFSVALT 4310
Query: 279 KEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTW 338
K G V+ WG+G RLGH V PK V L G + S++ G A + SGE+YTW
Sbjct: 4311 KSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTW 4370
Query: 339 GHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
G N+ G +G+ + PR L L G + KV CG HT +STS
Sbjct: 4371 GDNDEGQ--LGDGTVTAIQRPR-LVAALQGKHIVKVTCGSAHTLALSTS 4416
Score = 221 (82.9 bits), Expect = 7.0e-28, Sum P(3) = 7.0e-28
Identities = 67/212 (31%), Positives = 98/212 (46%)
Query: 272 KHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTK 331
+H + + WG G+D RLGH + P + L VQSV CG + A+T
Sbjct: 626 RHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAAITC 685
Query: 332 SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVS-KVACGEWHTAIVSTSGQL 390
G + TWG + +G S LP + D + V + G+ H+ +++ G +
Sbjct: 686 GGNLLTWGRGTYAR--LGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLV 743
Query: 391 FTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIG 450
F +GDG +G LG+GN QP VESL +V+ V G + A+ S+
Sbjct: 744 FAWGDGDYGKLGNGNCNGSLQPILVESLP--RVQRVFAGSQFSVAL---------SSE-- 790
Query: 451 GKLFTWGDADKGRLGHVDGERKLLPTCVTRLV 482
G+L+TWG A LGH ER + V RLV
Sbjct: 791 GQLYTWGKATC--LGHQLVERSVQGCSVPRLV 820
Score = 214 (80.4 bits), Expect = 7.0e-28, Sum P(3) = 7.0e-28
Identities = 51/153 (33%), Positives = 77/153 (50%)
Query: 453 LFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAV 512
++ WG +G+LG ++G R PT L VQ + G +T GK++ G
Sbjct: 4051 IYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGYGS 4110
Query: 513 HGQLGNPKAKDRSITVVEGKLKEEFVK--GISSGSYHVAVLTSGGSVYTWGKNANGQLGL 570
G+LG + +I + G L+ FVK ++SG H LT+ G VY WG+ +G+LG
Sbjct: 4111 GGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH 4170
Query: 571 GDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
G+ + P VE L V + CGS+ +AAI
Sbjct: 4171 GNRMSYDRPKLVEHLNGMSVADIACGSAHSAAI 4203
Score = 207 (77.9 bits), Expect = 2.1e-26, Sum P(3) = 2.1e-26
Identities = 74/266 (27%), Positives = 116/266 (43%)
Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
G D + T A+ P + + VQ++ G ++A +T G + WG G R
Sbjct: 641 GTGEDHRLGHGDTHARAV-PTKIAALEQHCVQSVYCGCSYSAAITCGGNLLTWGRGTYAR 699
Query: 294 LGHKVNMDVSCPKLVECLSGINVQSVSCG--EFQTCALTKSGEIYTWGHNNHGADLVGER 351
LGH + D S P LV LS V V+ G + + ALT G ++ WG ++G +G
Sbjct: 700 LGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGK--LGNG 757
Query: 352 RSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHG----NLQ 407
P L ++L RV +V G + +S+ GQL+T+G T LGH ++Q
Sbjct: 758 NCNGSLQPI-LVESLP--RVQRVFAGSQFSVALSSEGQLYTWGKAT--CLGHQLVERSVQ 812
Query: 408 NVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRL--G 465
S P+ V SL+ ++ VA + V C + + G++F WG D ++
Sbjct: 813 GCSVPRLVSSLQHKRIVDVA-----------VSVAHCLALSSSGEVFGWGRNDSQQICPA 861
Query: 466 HVDGERKLLPTCVTRLVDFDFVQASC 491
V E L + L F +C
Sbjct: 862 SVSSEPLLRTPILVSLPTFPASGIAC 887
Score = 206 (77.6 bits), Expect = 4.7e-27, Sum P(3) = 4.7e-27
Identities = 58/159 (36%), Positives = 78/159 (49%)
Query: 451 GKLFTWGDADKGRLGHVDGERKLLPTCVTRL--VDFDFVQASCGRMLTVGLTGLGKVYTM 508
GKLF G GRLG + +PT + L V V + G + LT G+VY
Sbjct: 4101 GKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAW 4160
Query: 509 GSAVHGQLG--NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANG 566
G G+LG N + DR +VE L V I+ GS H A +T+ G V TWGK G
Sbjct: 4161 GEGEDGKLGHGNRMSYDRP-KLVE-HLNGMSVADIACGSAHSAAITASGHVLTWGKGRYG 4218
Query: 567 QLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
+LG GDS+++ P VEAL + + CGS +C+
Sbjct: 4219 RLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCI 4257
Score = 191 (72.3 bits), Expect = 9.2e-25, Sum P(3) = 9.2e-25
Identities = 59/184 (32%), Positives = 89/184 (48%)
Query: 201 RLVTPTYGSPLIERKDILKD--VMIWGEGVLGGDIG-GAVDGSVSQNKTQVDALLPKLLE 257
R+V GS + + +D V WG+G G +G G +GS D P +E
Sbjct: 3178 RVVQVACGSRDAQTLALTEDGAVFSWGDGDFG-KLGRGGSEGS--------DT--PHEIE 3226
Query: 258 SAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQ 317
+ V I GA+ + +T+ GEV+ WG+G RLGH + V P+ + L G V
Sbjct: 3227 RLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVI 3286
Query: 318 SVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
V+ G A+T +G++Y WG N+HG G + + P + LD V V++VACG
Sbjct: 3287 HVAVGALHCLAVTDAGQVYAWGDNDHGQQ--GSGNTFVNKKPALVIG-LDAVFVNRVACG 3343
Query: 378 EWHT 381
H+
Sbjct: 3344 SSHS 3347
Score = 124 (48.7 bits), Expect = 7.2e-18, Sum P(3) = 7.2e-18
Identities = 40/126 (31%), Positives = 61/126 (48%)
Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
V WG+G G G +GS L P L+ES + VQ + G++ + ++ E
Sbjct: 743 VFAWGDGDYGKLGNGNCNGS----------LQPILVES--LPRVQRVFAGSQFSVALSSE 790
Query: 281 GEVFCWGEGKDGRLGHK-VNMDV---SCPKLVECLSGINVQSVSCGEFQTCALTKSGEIY 336
G+++ WG K LGH+ V V S P+LV L + V+ AL+ SGE++
Sbjct: 791 GQLYTWG--KATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVF 848
Query: 337 TWGHNN 342
WG N+
Sbjct: 849 GWGRND 854
Score = 70 (29.7 bits), Expect = 4.7e-12, Sum P(4) = 4.7e-12
Identities = 17/37 (45%), Positives = 22/37 (59%)
Query: 551 LTSGGS--VYTWGKNANGQLGLGDSQERETPTFVEAL 585
L+ GG+ +Y WG N GQLG + +TPT EAL
Sbjct: 4043 LSWGGASTIYGWGHNHRGQLGGLEGSRIKTPTPCEAL 4079
Score = 49 (22.3 bits), Expect = 3.1e-10, Sum P(3) = 3.1e-10
Identities = 9/24 (37%), Positives = 16/24 (66%)
Query: 370 RVSKVACGEWHTAIVSTSGQLFTY 393
++ +VAC E I+S G+L+T+
Sbjct: 573 QIKQVACCETQMLILSQEGKLYTW 596
Score = 47 (21.6 bits), Expect = 8.9e-10, Sum P(4) = 8.9e-10
Identities = 14/44 (31%), Positives = 21/44 (47%)
Query: 556 SVYTWGKNANGQLGLGDSQERETPTFVEAL-RDRQVESVVCGSS 598
+V WG N QLG + + PTF + + R R + + G S
Sbjct: 2987 TVMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIH--IAGGS 3028
Score = 44 (20.5 bits), Expect = 5.4e-26, Sum P(3) = 5.4e-26
Identities = 19/72 (26%), Positives = 32/72 (44%)
Query: 243 QNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDV 302
+ T +ALL + + + + V + A AL +E +G+ G LG + D+
Sbjct: 1152 EETTGAEALLLQYMHALIPACVATLQK-AHELALQCREPGENSFGQ-MVGHLGRVLQADI 1209
Query: 303 SCPKLVECLSGI 314
S L E L G+
Sbjct: 1210 SDALLNELLVGL 1221
Score = 42 (19.8 bits), Expect = 2.3e-36, Sum P(2) = 2.3e-36
Identities = 18/64 (28%), Positives = 28/64 (43%)
Query: 865 LAVRLHTLSEKISAAKEAKEGVDANLP-PKLDTDKHPEVKLPKDRKVDSLCSSPIVFSNK 923
L RLH E++ A ++ G+ +P P L E++ +C SP +
Sbjct: 4724 LGFRLHEFDEQVKAVRD---GMSKVIPVPLLSLFSAAELQA-------MVCGSPDIPLGL 4773
Query: 924 LKSV 927
LKSV
Sbjct: 4774 LKSV 4777
Score = 40 (19.1 bits), Expect = 4.7e-12, Sum P(4) = 4.7e-12
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 467 VDGERKLLPTCVTRLVDFDFVQASC 491
+ GE +L P + +VDF +Q SC
Sbjct: 1691 IHGEGELDPALMQDIVDFA-LQDSC 1714
Score = 38 (18.4 bits), Expect = 6.2e-12, Sum P(3) = 6.2e-12
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 762 EKSVEPTPIPKTQMSTHSPLLRKISLGSNFI 792
EKS P P T S+ L + + L +N +
Sbjct: 1371 EKSSAPGPSRLTHFSSECALAQLLGLVANLM 1401
Score = 37 (18.1 bits), Expect = 9.3e-12, Sum P(4) = 9.3e-12
Identities = 7/11 (63%), Positives = 8/11 (72%)
Query: 473 LLPTCVTRLVD 483
LL TC+T L D
Sbjct: 3633 LLETCITELED 3643
>MGI|MGI:103234 [details] [associations]
symbol:Herc2 "hect (homologous to the E6-AP (UBE3A) carboxyl
terminus) domain and RCC1 (CHC1)-like domain (RLD) 2" species:10090
"Mus musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;IBA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO;IBA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005743 "mitochondrial inner membrane"
evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0006281
"DNA repair" evidence=ISO] [GO:0006464 "cellular protein
modification process" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=ISO] [GO:0007283 "spermatogenesis"
evidence=IMP] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016874
"ligase activity" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=ISO] [GO:0032183 "SUMO binding" evidence=ISO] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=IBA] [GO:0046872 "metal ion binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS00191 PROSITE:PS01357 PROSITE:PS50082
PROSITE:PS50135 PROSITE:PS50237 PROSITE:PS50255 PROSITE:PS50294
PROSITE:PS51416 SMART:SM00119 SMART:SM00291 UniPathway:UPA00143
MGI:MGI:103234 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005814 PROSITE:PS00678 GO:GO:0005743 GO:GO:0046872
GO:GO:0008270 GO:GO:0006281 GO:GO:0007283 GO:GO:0020037
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256
PROSITE:PS51284 GO:GO:0042787 GO:GO:0032183 Gene3D:2.30.30.30
InterPro:IPR021097 InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
eggNOG:COG5021 GeneTree:ENSGT00700000104208 CTD:8924 KO:K10595
OMA:QLAFTRD HOVERGEN:HBG081598 OrthoDB:EOG41C6V9 InterPro:IPR006624
SMART:SM00706 EMBL:AF061529 EMBL:AF071173 EMBL:AC102121
EMBL:AC102150 EMBL:AK141515 EMBL:AK148361 EMBL:AK161826
EMBL:AK162270 EMBL:AK162708 EMBL:AK220338 EMBL:BC044667
EMBL:BC054829 IPI:IPI00309574 IPI:IPI00314989 RefSeq:NP_034548.2
UniGene:Mm.20929 ProteinModelPortal:Q4U2R1 SMR:Q4U2R1 STRING:Q4U2R1
PhosphoSite:Q4U2R1 PaxDb:Q4U2R1 PRIDE:Q4U2R1
Ensembl:ENSMUST00000076226 Ensembl:ENSMUST00000164095 GeneID:15204
KEGG:mmu:15204 UCSC:uc009hdv.1 InParanoid:Q4U2R1 ChiTaRS:HERC2
NextBio:287753 Bgee:Q4U2R1 Genevestigator:Q4U2R1
GermOnline:ENSMUSG00000030451 Uniprot:Q4U2R1
Length = 4836
Score = 470 (170.5 bits), Expect = 2.5e-36, Sum P(3) = 2.5e-36
Identities = 129/392 (32%), Positives = 195/392 (49%)
Query: 224 WGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEV 283
WG G +GG ++G+ + T +AL A + VQ I G + VT +G++
Sbjct: 3959 WGHNHRG-QLGG-IEGAKVKVPTPCEAL-------ATLRPVQLIG-GEQTLFAVTADGKL 4008
Query: 284 FCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGHN 341
+ G G GRLG VS P L+E + + ++ +V+ G AL+ GE+Y+WG
Sbjct: 4009 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEA 4068
Query: 342 NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVL 401
G G R PR + ++L G+ V VA G H+A V+ +G L+T+G G +G L
Sbjct: 4069 EDGKLGHGNRSPCDR--PR-VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4125
Query: 402 GHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADK 461
GH + ++ +PK VE+L+G +V +ACG + C ++ +++WGD D
Sbjct: 4126 GHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTL-------CLTD--DDTVWSWGDGDY 4176
Query: 462 GRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA 521
G+LG + +P + L V+ CG +V LT G VYT G + +LG+
Sbjct: 4177 GKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD 4236
Query: 522 KD-RSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPT 580
R V+G L+ + V I++GS H T G VYTWG N GQLG G + + P
Sbjct: 4237 DHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPR 4295
Query: 581 FVEALRDRQVESVVCGSSITAAICLHKSISVG 612
V AL+ ++V V CGS+ T A K S G
Sbjct: 4296 LVAALQGKKVNRVACGSAHTLAWSTSKPASAG 4327
Score = 457 (165.9 bits), Expect = 5.9e-34, Sum P(4) = 5.9e-34
Identities = 117/355 (32%), Positives = 182/355 (51%)
Query: 252 LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMD-VSCPKLVEC 310
+P E+ L+V ++ G+K VT EG+V+ GE +GRLG ++ V P+ +
Sbjct: 2983 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITA 3042
Query: 311 LSGINVQSVSC--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
LS V+ V+ G ALT G++++WG + G +G SR + +L + L
Sbjct: 3043 LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK--LGHF-SRMNCDKPRLIEALKT 3099
Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
R+ +ACG H+A +++SG+L+T+G G +G LGHG+ +PK V+ L G +V VAC
Sbjct: 3100 KRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 3159
Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ 488
G + + D G +F+WGD D G+LG E +P + RL Q
Sbjct: 3160 GSRDAQTLA--LTDE-------GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQ 3210
Query: 489 ASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK-AKDRSITVVEGKLKEEFVKGISSGSYH 547
CG ++ LT G V+T G + +LG+ R VVEG L+ + + ++ G+ H
Sbjct: 3211 IECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALH 3269
Query: 548 VAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
+T G VY WG N +GQ G G + PT V+ L +++ V CGSS + A
Sbjct: 3270 CLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3324
Score = 388 (141.6 bits), Expect = 1.8e-26, Sum P(4) = 1.8e-26
Identities = 108/344 (31%), Positives = 166/344 (48%)
Query: 253 PKLLESAVMLDVQNISL--GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVEC 310
P LLES + ++ +++ G KH ++ EGEV+ WGE +DG+LGH P+++E
Sbjct: 4030 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4089
Query: 311 LSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR 370
L GI V V+ G + +T +G++YTWG +G +G S P KL + L G R
Sbjct: 4090 LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR--LGHSDSEDQLKP-KLVEALQGHR 4146
Query: 371 VSKVACG--EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
V +ACG + T ++ ++++GDG +G LG G P +++SL GL V V C
Sbjct: 4147 VIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC 4206
Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ 488
G + A+ KS A+ +TWG D RLGH + P V L +
Sbjct: 4207 GSQFSVALT-------KSGAV----YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIA 4255
Query: 489 ASCGRMLTVGLTGLGKVYTMGSAVHGQLG----NPKAKDRSITVVEGKLKEEFVKGISSG 544
+ G + V T G+VYT G GQLG N + R + ++GK V ++ G
Sbjct: 4256 IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKK----VNRVACG 4311
Query: 545 SYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDR 588
S H ++ GK Q+ + + +E P + ALR+R
Sbjct: 4312 SAHTLAWSTSKPASA-GK-LPAQVPMEYNHLQEIP--IIALRNR 4351
Score = 375 (137.1 bits), Expect = 4.5e-25, Sum P(4) = 4.5e-25
Identities = 99/320 (30%), Positives = 156/320 (48%)
Query: 282 EVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
+VF WG +LG + P E LS +NV V+ G A+T G++Y+ G
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEA 3020
Query: 342 NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC--GEWHTAIVSTSGQLFTYGDGTFG 399
+G +G S + +PR++ L V KVA G H ++ G++F++G+G G
Sbjct: 3021 TNGRLGLG-MSSGTVPIPRQI-TALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDG 3078
Query: 400 VLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
LGH + N +P+ +E+L+ +++ +ACG H+AA+ G+L+TWG
Sbjct: 3079 KLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTS-----------SGELYTWGLG 3127
Query: 460 DKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRM--LTVGLTGLGKVYTMGSAVHGQLG 517
+ GRLGH D +L P V L+ +Q +CG T+ LT G V++ G G+LG
Sbjct: 3128 EYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG 3187
Query: 518 NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERE 577
++ +I +L + V I G+ LT G V+TWGK +LG G
Sbjct: 3188 RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVR 3247
Query: 578 TPTFVEALRDRQVESVVCGS 597
P VE LR +++ V G+
Sbjct: 3248 KPQVVEGLRGKKIVHVAVGA 3267
Score = 374 (136.7 bits), Expect = 5.8e-25, Sum P(4) = 5.8e-25
Identities = 121/411 (29%), Positives = 182/411 (44%)
Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
G ++ WG G+LG V P E L+ + + GE A+T G++Y G+
Sbjct: 3954 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4013
Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC--GEWHTAIVSTSGQLFTYGDGTF 398
G +G S S P L +++ V + KVA G H +S+ G+++++G+
Sbjct: 4014 GAGGRLGIGGTESVS--TPT-LLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4070
Query: 399 GVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
G LGHGN +P+ +ESLRG++V VA G H+A C + A G L+TWG
Sbjct: 4071 GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSA---------CVTAA--GDLYTWGK 4119
Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAVHGQL 516
GRLGH D E +L P V L + +CG T+ LT V++ G +G+L
Sbjct: 4120 GRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKL 4179
Query: 517 GNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQER 576
G + + + L V + GS LT G+VYTWGK +LG G
Sbjct: 4180 GRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV 4239
Query: 577 ETPTFVEALRDRQVESVVCGSSITAAICLHKS------------ISVGDQSSCSQCRMPF 624
P V+ L+ ++V ++ GS + C + G ++ + R+
Sbjct: 4240 RRPRQVQGLQGKKVIAIATGS-LHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVA 4298
Query: 625 GFRRKKHNCYNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKI 675
+ KK N CG A ST K +A P + P YNHLQ+I
Sbjct: 4299 ALQGKKVNRVACGSAHTLAWSTSKPASAGKLPAQ-VPME-----YNHLQEI 4343
Score = 354 (129.7 bits), Expect = 8.0e-23, Sum P(4) = 8.0e-23
Identities = 104/391 (26%), Positives = 178/391 (45%)
Query: 245 KTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC 304
K + + P E L V ++ K ++++ G V+ N D+
Sbjct: 435 KYYANVIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYT----------QAYNSDMLA 484
Query: 305 PKLVECLSGINVQSVSCGE--FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL 362
P+LV+ L+ N+ ++ AL +GE+Y+WG + G +G + P K+
Sbjct: 485 PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGR--LGHGDTVPLEEP-KV 541
Query: 363 FDTLDGVRVSK----VACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESL 418
G + K +ACG ++A ++ G+L+T+G G +G LGHG+ ++ + P V L
Sbjct: 542 ISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL 601
Query: 419 RGLKVKSVACGPW--HTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPT 476
+GLKV VACG T A+ + G++++WGD D G+LG + P
Sbjct: 602 KGLKVIDVACGSGDAQTLAVTE-----------NGQVWSWGDGDYGKLGRGGSDGCKTPK 650
Query: 477 CVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD-RSITVVEGKLKE 535
+ +L D D ++ CG ++ LT G+VY+ G + +LG+ + R ++EG L+
Sbjct: 651 LIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG-LQG 709
Query: 536 EFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVC 595
+ V +++GS H LT V++WG N Q + PT + L + + + C
Sbjct: 710 KKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPTALPGLDSKHIVGIAC 769
Query: 596 G--SSITAAICLHKSISVGDQSSCSQCRMPF 624
G S + C SI + C M F
Sbjct: 770 GPAQSFAWSSCSEWSIGLRVPFVVDICSMTF 800
Score = 271 (100.5 bits), Expect = 4.5e-14, Sum P(4) = 4.5e-14
Identities = 79/274 (28%), Positives = 133/274 (48%)
Query: 332 SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
SG IY WGHN+ G L G ++ +P + L +R ++ GE V+ G+L+
Sbjct: 3953 SGTIYGWGHNHRG-QLGGIEGAKVK-VPTPC-EALATLRPVQLIGGEQTLFAVTADGKLY 4009
Query: 392 TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
G G G LG G ++VS P +ES++ + +K VA V+ C + + G
Sbjct: 4010 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVA---------VNSGGKHCLALSSEG 4060
Query: 452 KLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
++++WG+A+ G+LGH + P + L + V + G + +T G +YT G
Sbjct: 4061 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4120
Query: 512 VHGQLGNPKAKDRSITVVEGKLKEEFVKGIS--SGSYHVAVLTSGGSVYTWGKNANGQLG 569
+G+LG+ ++D+ + L+ V I+ SG LT +V++WG G+LG
Sbjct: 4121 RYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4180
Query: 570 LGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
G S + P +++L V V CGS + A+
Sbjct: 4181 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4214
Score = 242 (90.2 bits), Expect = 4.5e-11, Sum P(4) = 4.5e-11
Identities = 86/332 (25%), Positives = 155/332 (46%)
Query: 292 GRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER 351
G +G K +V P E L+ + V V+C E + L+++G +YT +N+ D++ +
Sbjct: 430 GLIGWKYYANVIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNS---DMLAPQ 486
Query: 352 RSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQ 411
+ R + V+++ + G + A+ +T G+++++G G G LGHG+ + +
Sbjct: 487 LVQG-LASRNI------VKIAAHSDGHHYLALAAT-GEVYSWGCGDGGRLGHGDTVPLEE 538
Query: 412 PKEVESLRGLK----VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHV 467
PK + + G + V +ACG ++AAI G+L D+ V
Sbjct: 539 PKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 598
Query: 468 DGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD-RSI 526
G + L +++D V G T+ +T G+V++ G +G+LG + ++
Sbjct: 599 AGLKGL------KVID---VACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTP 649
Query: 527 TVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALR 586
++E KL++ V + GS LT G VY+WGK N +LG G + P +E L+
Sbjct: 650 KLIE-KLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQ 708
Query: 587 DRQVESVVCGSSITAAICLHKSI-SVGDQSSC 617
++V V GS+ A+ + S G C
Sbjct: 709 GKKVIDVAAGSTHCLALTEDSEVHSWGSNDQC 740
Score = 229 (85.7 bits), Expect = 1.3e-10, Sum P(3) = 1.3e-10
Identities = 60/190 (31%), Positives = 92/190 (48%)
Query: 198 ESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLE 257
+ HR++ GS + + D +W G GD G G K +P ++
Sbjct: 4143 QGHRVIDIACGSGDAQTLCLTDDDTVWSWG--DGDYGKLGRGGSDGCK------VPMKID 4194
Query: 258 SAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQ 317
S L V + G++ + +TK G V+ WG+G RLGH + V P+ V+ L G V
Sbjct: 4195 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4254
Query: 318 SVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
+++ G T+ GE+YTWG N+ G +G+ + + PR L L G +V++VACG
Sbjct: 4255 AIATGSLHCVCCTEDGEVYTWGDNDEGQ--LGDGTTNAIQRPR-LVAALQGKKVNRVACG 4311
Query: 378 EWHTAIVSTS 387
HT STS
Sbjct: 4312 SAHTLAWSTS 4321
Score = 216 (81.1 bits), Expect = 3.5e-25, Sum P(4) = 3.5e-25
Identities = 72/232 (31%), Positives = 105/232 (45%)
Query: 378 EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
+W T SG ++ +G G LG V P E+L L+ + G A+
Sbjct: 3945 DW-TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4003
Query: 438 DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRL--VDFDFVQASCGRML 495
D GKL+ G GRLG E PT + + V V + G
Sbjct: 4004 ---AD--------GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKH 4052
Query: 496 TVGLTGLGKVYTMGSAVHGQLG--NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTS 553
+ L+ G+VY+ G A G+LG N DR V+E L+ V +++G H A +T+
Sbjct: 4053 CLALSSEGEVYSWGEAEDGKLGHGNRSPCDRP-RVIES-LRGIEVVDVAAGGAHSACVTA 4110
Query: 554 GGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
G +YTWGK G+LG DS+++ P VEAL+ +V + CGS +CL
Sbjct: 4111 AGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCL 4162
Score = 208 (78.3 bits), Expect = 3.5e-25, Sum P(4) = 3.5e-25
Identities = 58/189 (30%), Positives = 94/189 (49%)
Query: 200 HRLVTPTYGSPLIERKDILKDVMI--WGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLE 257
HR++ GS + + + ++ WG+G G +G GS N +P+ +E
Sbjct: 3152 HRVIQVACGSRDAQTLALTDEGLVFSWGDGDFG-KLGRG--GSEGCN-------IPQNIE 3201
Query: 258 SAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQ 317
V I GA+ + +TK G V+ WG+G RLGH ++ V P++VE L G +
Sbjct: 3202 RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIV 3261
Query: 318 SVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
V+ G A+T SG++Y WG N+HG G + + P L L+G ++++VACG
Sbjct: 3262 HVAVGALHCLAVTDSGQVYAWGDNDHGQQ--GNGTTTVNRKPT-LVQGLEGQKITRVACG 3318
Query: 378 EWHTAIVST 386
H+ +T
Sbjct: 3319 SSHSVAWTT 3327
Score = 207 (77.9 bits), Expect = 2.6e-23, Sum P(4) = 2.6e-23
Identities = 121/468 (25%), Positives = 198/468 (42%)
Query: 368 GVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVA 427
G + K G TA + T ++F +G LG + P E+L L V VA
Sbjct: 2942 GSLIRKKTPGLESTATIRT--KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVA 2999
Query: 428 CGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG-HVDGERKLLPTCVTRLVDFDF 486
G + ++ + V+ GK+++ G+A GRLG + +P +T L +
Sbjct: 3000 GG---SKSLFAVTVE--------GKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVV 3048
Query: 487 VQA---SCGRMLTVGLTGLGKVYTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGIS 542
+ S GR T LT GKV++ G G+LG+ + ++E LK + ++ I+
Sbjct: 3049 KKVAVHSGGRHATA-LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIA 3106
Query: 543 SGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
GS H A LTS G +YTWG G+LG GD+ + P V+ L +V V CGS
Sbjct: 3107 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQT 3166
Query: 603 ICLHKS---ISVGD-------QSSCSQCRMPFGFRRKKHN--CY-NCGLHFCSACSTKKI 649
+ L S GD + C +P R C CG F A + +
Sbjct: 3167 LALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGV 3226
Query: 650 INASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQ-GSLSEEVKEEKG 708
+ T KG R+ H++K +++ E + ++++ G+L + G
Sbjct: 3227 V---WTWGKGDYFRLGHGSDVHVRK----PQVV--EGLRGKKIVHVAVGALHCLAVTDSG 3277
Query: 709 ALTPSRGQSFTSKQSRN---VERKPGECLESASSLSSGL--QRWGQVSCPIRFKTHCHEK 763
+ + G + +Q V RKP +L GL Q+ +V+C +H
Sbjct: 3278 QVY-AWGDNDHGQQGNGTTTVNRKP--------TLVQGLEGQKITRVACG---SSH---- 3321
Query: 764 SVEPTPIPKTQMSTHSPLLRKIS---LGSNFIPIASTVEKDLSESNKM 808
SV T + S H P+L + + LG++++ + S + S SNK+
Sbjct: 3322 SVAWTTVDVATPSVHEPVLFQTARDPLGASYLGVPSDADSS-SSSNKI 3368
Score = 199 (75.1 bits), Expect = 2.9e-24, Sum P(4) = 2.9e-24
Identities = 55/158 (34%), Positives = 79/158 (50%)
Query: 221 VMIWGEGVLGGDIG-GAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
V WG+G G +G G DG KT PKL+E LDV + G++ + +TK
Sbjct: 627 VWSWGDGDYG-KLGRGGSDGC----KT------PKLIEKLQDLDVIKVRCGSQFSIALTK 675
Query: 280 EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
+G+V+ WG+G + RLGH V PKL+E L G V V+ G ALT+ E+++WG
Sbjct: 676 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Query: 340 HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
N+ R ++ P L LD + +ACG
Sbjct: 736 SNDQCQHFDTLRVTKPE--PTAL-PGLDSKHIVGIACG 770
Score = 104 (41.7 bits), Expect = 6.7e-13, Sum P(4) = 6.7e-13
Identities = 51/208 (24%), Positives = 87/208 (41%)
Query: 400 VLGHGNLQNVSQPKEVE-SLRGLKVKSVA-CGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
V G +L N+ + K + + V ++ C +H ++I + +C+S+ I K+ G
Sbjct: 2852 VSGGNSLNNLIELKTININQTDTTVPLLSDCAEYHR--YIEIAIKQCRSSGIDCKIH--G 2907
Query: 458 DADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRML---TVGLTGLG----KVYTMGS 510
GR+ + + +P + + + + S G ++ T GL KV+ G
Sbjct: 2908 LILLGRIRAEEEDLAAVPFLASDNEEEEDDKGSTGSLIRKKTPGLESTATIRTKVFVWGL 2967
Query: 511 AVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGL 570
QLG K + L V ++ GS + +T G VY+ G+ NG+LGL
Sbjct: 2968 NDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGL 3027
Query: 571 GDSQER-ETPTFVEALRDRQVESVVCGS 597
G S P + AL V+ V S
Sbjct: 3028 GMSSGTVPIPRQITALSSYVVKKVAVHS 3055
Score = 41 (19.5 bits), Expect = 5.9e-34, Sum P(4) = 5.9e-34
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 251 LLPKLLESAVMLDVQNISLGAKHAAL 276
LLP+L+ S V+L +N SL + A+
Sbjct: 1134 LLPELVVSIVLLLSKNASLMQEAGAI 1159
Score = 41 (19.5 bits), Expect = 8.0e-23, Sum P(4) = 8.0e-23
Identities = 11/25 (44%), Positives = 14/25 (56%)
Query: 692 LLNLQGSLSEEVKEEKGALTPSRGQ 716
L+NL GS E+ K +K A GQ
Sbjct: 2287 LVNLAGSKLEKHKTKKSAKPAFAGQ 2311
Score = 41 (19.5 bits), Expect = 8.0e-23, Sum P(4) = 8.0e-23
Identities = 16/50 (32%), Positives = 23/50 (46%)
Query: 732 ECLE--SASSLSSGLQRWGQVSCPIRF-KTHCHEKSVEPTPIPKTQMSTH 778
EC + +S S GLQ Q+ K H S TPI K+++ +H
Sbjct: 1333 ECAKWLQSSIFSGGLQT-SQIHYSYNEEKDEDHCSSPGGTPISKSRLCSH 1381
Score = 41 (19.5 bits), Expect = 1.3e-07, Sum P(4) = 1.3e-07
Identities = 18/64 (28%), Positives = 30/64 (46%)
Query: 492 GR-MLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAV 550
GR +L+ L+G+G Y + + +L + +D + G+L + V SS Y
Sbjct: 3567 GREVLSAVLSGMGTAYPQVADMLLELCVTELEDVATDSQSGRLSSQPVVVESSHPYTDDT 3626
Query: 551 LTSG 554
TSG
Sbjct: 3627 STSG 3630
Score = 40 (19.1 bits), Expect = 2.5e-36, Sum P(3) = 2.5e-36
Identities = 18/61 (29%), Positives = 32/61 (52%)
Query: 868 RLHTLSEKISAAKEAKEGVDANLPPKLDTDKHPEVKLPKDRKVDSL-CSSPIVFSNKLKS 926
RLH E+++A +E G+ A + P P + L +++++ C SP + + LKS
Sbjct: 4640 RLHEFDEQVAAVRE---GM-ARVVPV------PLLSLFTGYELETMVCGSPDIPLHLLKS 4689
Query: 927 V 927
V
Sbjct: 4690 V 4690
Score = 39 (18.8 bits), Expect = 2.5e-36, Sum P(3) = 2.5e-36
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 11 GQKEKQLRLNSVTKIIMGQRTVNFQC 36
G QL+ V K+++G R + C
Sbjct: 3135 GDNTTQLKPKMV-KVLLGHRVIQVAC 3159
Score = 39 (18.8 bits), Expect = 2.5e-36, Sum P(3) = 2.5e-36
Identities = 14/52 (26%), Positives = 27/52 (51%)
Query: 69 ESWFLGLRAAISSCRRSRTFSCLREKRG--VQSCVSSPASYIRRKHNLGLLE 118
ESW G + ++ + + ++E++ VQS ++ S +R K L +LE
Sbjct: 100 ESWVWGRQPDVNELKECLSV-LVKEQQALAVQSATTT-LSALRLKQRLVILE 149
Score = 38 (18.4 bits), Expect = 1.6e-22, Sum P(4) = 1.6e-22
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 731 GECLESASSL-SSGLQRWGQVSC 752
G+ L A+S+ SS Q + +V+C
Sbjct: 1102 GDILPVAASIASSSWQHFAEVAC 1124
Score = 37 (18.1 bits), Expect = 5.1e-36, Sum P(3) = 5.1e-36
Identities = 8/25 (32%), Positives = 13/25 (52%)
Query: 638 LHFCSACSTKKIINASLTPNKGKPS 662
+HFC + T +LT G+P+
Sbjct: 4787 IHFCKSIDTDDYARIALT---GEPA 4808
Score = 37 (18.1 bits), Expect = 2.0e-22, Sum P(4) = 2.0e-22
Identities = 11/49 (22%), Positives = 18/49 (36%)
Query: 641 CSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKIT-HSGRLLKQENQS 688
C C T I + C+TC+ + T H+ + + QS
Sbjct: 2709 CDGCQTFPINGSRFKCRNCDDFDFCETCFKTKKHNTRHTFGRINEPGQS 2757
>UNIPROTKB|Q15751 [details] [associations]
symbol:HERC1 "Probable E3 ubiquitin-protein ligase HERC1"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0005086 "ARF
guanyl-nucleotide exchange factor activity" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=TAS] Pfam:PF00632
InterPro:IPR017986 InterPro:IPR000569 InterPro:IPR001680
InterPro:IPR003877 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00622
PROSITE:PS50082 PROSITE:PS50237 PROSITE:PS50294 SMART:SM00119
SMART:SM00320 UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005829 GO:GO:0005794 GO:GO:0016020 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 GO:GO:0005086
SUPFAM:SSF56204 eggNOG:COG5021 EMBL:U50078 EMBL:AC073167
EMBL:AC118274 EMBL:BC040929 IPI:IPI00022479 PIR:S71752
RefSeq:NP_003913.3 UniGene:Hs.210385 HSSP:Q922Y1
ProteinModelPortal:Q15751 SMR:Q15751 IntAct:Q15751 STRING:Q15751
PhosphoSite:Q15751 DMDM:296434522 PaxDb:Q15751 PRIDE:Q15751
Ensembl:ENST00000443617 GeneID:8925 KEGG:hsa:8925 UCSC:uc002amp.3
CTD:8925 GeneCards:GC15M063900 HGNC:HGNC:4867 HPA:HPA049749
MIM:605109 neXtProt:NX_Q15751 PharmGKB:PA29242 HOGENOM:HOG000168589
HOVERGEN:HBG053919 InParanoid:Q15751 KO:K10594 OMA:HHYQDGI
OrthoDB:EOG40GCPW GenomeRNAi:8925 NextBio:33556 ArrayExpress:Q15751
Bgee:Q15751 CleanEx:HS_HERC1 Genevestigator:Q15751 Uniprot:Q15751
Length = 4861
Score = 454 (164.9 bits), Expect = 7.6e-36, Sum P(2) = 7.6e-36
Identities = 114/347 (32%), Positives = 176/347 (50%)
Query: 265 QNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSV--SCG 322
Q + G ++ G V GEG GRLG + D+ ++ L G V + SCG
Sbjct: 4030 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4089
Query: 323 -EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT 381
+ + ALT+SGE+++WG ++G +G S PR++ + L G V +++CG H+
Sbjct: 4090 SDGHSMALTESGEVFSWGDGDYGK--LGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS 4146
Query: 382 AIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMV 441
A+V++ G+LFT+G+G +G LG GN N P+ V +L G ++ VACG HT A+
Sbjct: 4147 AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV----- 4201
Query: 442 DRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTG 501
+A G ++ +GD D G+LG + K P + L + +CG +V LT
Sbjct: 4202 -----SADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTK 4256
Query: 502 LGKVYTMGSAVHGQLGNPKAKDRS------ITVVEGKLKEEFVKGISSGSYHVAVLTSGG 555
G VYT G +G P+ + R+ I V+ G + E+ ++ G+ H L S G
Sbjct: 4257 DGHVYTFGQ--DRLIGLPEGRARNHNRPQQIPVLAGVIIED----VAVGAEHTLALASNG 4310
Query: 556 SVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
VY WG N+ GQLGLG + PT V L+ + V + G +AA
Sbjct: 4311 DVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAA 4357
Score = 371 (135.7 bits), Expect = 2.6e-27, Sum P(2) = 2.6e-27
Identities = 104/358 (29%), Positives = 173/358 (48%)
Query: 268 SLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTC 327
S+ A +V++ EV+ WG +L + PKL S + Q++ G++ T
Sbjct: 359 SIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFS--DAQTIEAGQYCTF 416
Query: 328 ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR-VSKVACGEWHTAIVST 386
++ G + G ++G +G+ ++S L + F+ ++ VS + HT +T
Sbjct: 417 VISTDGSVRACGKGSYGRLGLGDSNNQST-LKKLTFEPHRSIKKVSSSKGSDGHTLAFTT 475
Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCK 445
G++F++GDG +G LGHGN PK ++ L+G V V+ G H+AA+ + D
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE---D--- 529
Query: 446 SNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK- 504
G+L+TWG+ D GRLGH D + +PT V + + + SCG T+ L+ G+
Sbjct: 530 -----GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRT 582
Query: 505 VYTMGSAVHGQLGNPKA-KDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKN 563
V++ G +G+LG+ + V+E L+ F++ + +GS LTS G VY WG
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQSSLALTSTGQVYAWGCG 641
Query: 564 ANGQLGLGDSQERET-PTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQC 620
A LG G S+ P +E L ++ V G S A+ + +S QC
Sbjct: 642 AC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQC 697
Score = 357 (130.7 bits), Expect = 5.3e-24, Sum P(3) = 5.3e-24
Identities = 111/362 (30%), Positives = 168/362 (46%)
Query: 246 TQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG-HKVNMDVSC 304
TQ L PKL S D Q I G +++ +G V G+G GRLG N +
Sbjct: 389 TQEKILQPKLAPS--FSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTL 446
Query: 305 PKLV-ECLSGINVQSVSCG-EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL 362
KL E I S S G + T A T GE+++WG ++G +G S + P+ +
Sbjct: 447 KKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGK--LGHGNSSTQKYPKLI 504
Query: 363 FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLK 422
L G V V+ G H+A V+ G+L+T+G+G FG LGHG+ + + P V+ +
Sbjct: 505 QGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN-- 562
Query: 423 VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLV 482
V V+CG HT A+ + G ++++G D G+LGH D R P + L
Sbjct: 563 VGEVSCGSSHTIAL----------SKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQ 612
Query: 483 DFDFVQASC-GRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGI 541
F++ C G ++ LT G+VY G G+ +A ++E +L + +
Sbjct: 613 GM-FIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRPKLIE-ELAATRIVDV 670
Query: 542 SSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGSSIT 600
S G H L+ VY WG N+ GQ G G+S T P V L ++ + G+S +
Sbjct: 671 SIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHS 730
Query: 601 AA 602
A
Sbjct: 731 LA 732
Score = 342 (125.4 bits), Expect = 8.6e-24, Sum P(2) = 8.6e-24
Identities = 101/347 (29%), Positives = 169/347 (48%)
Query: 282 EVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
+V+ WG G+ G+L + +V P S Q V CG+ T + +G + G
Sbjct: 3998 DVYLWGAGRHGQLA-EAGRNVMVPAAAPSFS--QAQQVICGQNCTFVIQANGTVLACGEG 4054
Query: 342 NHGADLVGERRSRS-HWLPRKLFDTLDGVRVSKV--ACG-EWHTAIVSTSGQLFTYGDGT 397
++G +G+ S H L + L G V+++ +CG + H+ ++ SG++F++GDG
Sbjct: 4055 SYGR--LGQGNSDDLHVLT--VISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGD 4110
Query: 398 FGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
+G LGHGN +P+++E+L+G +V ++CG H+A + GKLFT+G
Sbjct: 4111 YGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTS-----------DGKLFTFG 4159
Query: 458 DADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK-VYTMGSAVHGQL 516
+ D GRLG + K LP VT L + Q +CG T+ ++ G V+ G +G+L
Sbjct: 4160 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKL 4219
Query: 517 G--NPKAKD--RSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGD 572
G N AK + I V+ G +K ++ G+ LT G VYT+G++ L G
Sbjct: 4220 GLGNSTAKSSPQKIDVLCGI----GIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGR 4275
Query: 573 SQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQ 619
++ P + L +E V G+ T A+ + + +S Q
Sbjct: 4276 ARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQ 4322
Score = 335 (123.0 bits), Expect = 4.8e-23, Sum P(2) = 4.8e-23
Identities = 101/326 (30%), Positives = 161/326 (49%)
Query: 273 HAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKS 332
H+ +T+ GEVF WG+G G+LGH + P+ +E L G V +SCG + +T
Sbjct: 4093 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD 4152
Query: 333 GEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQL-F 391
G+++T+G+ ++G +G ++ LP ++ L+G ++ +VACG HT VS G + +
Sbjct: 4153 GKLFTFGNGDYGRLGLGNTSNKK--LPERV-TALEGYQIGQVACGLNHTLAVSADGSMVW 4209
Query: 392 TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
+GDG +G LG GN S P++++ L G+ +K VACG + A+ G
Sbjct: 4210 AFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTK-----------DG 4258
Query: 452 KLFTWGDADKGRLGHVDGERKL--LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMG 509
++T+G D+ +G +G + P + L + G T+ L G VY G
Sbjct: 4259 HVYTFGQ-DR-LIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWG 4316
Query: 510 SAVHGQLGNPKAKD-RSITVVEGKLKEEFVKGISSGSYHVAVLTSGG-SVYTWGKNANGQ 567
S GQLG R T+V G L+ + V+ IS+G H A T+ G + Q
Sbjct: 4317 SNSEGQLGLGHTNHVREPTLVTG-LQGKNVRQISAGRCHSAAWTAPPVPPRAPGVSVPLQ 4375
Query: 568 LGLGDSQERETPTFVEALRDRQVESV 593
LGL D+ P ALR+ + +V
Sbjct: 4376 LGLPDT----VPPQYGALREVSIHTV 4397
Score = 298 (110.0 bits), Expect = 4.3e-19, Sum P(2) = 4.3e-19
Identities = 90/304 (29%), Positives = 149/304 (49%)
Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
+V WG+G D G G+ + + P+ +E+ +V +S G KH+A+VT
Sbjct: 4102 EVFSWGDG----DYGKLGHGNSDRQRR------PRQIEALQGEEVVQMSCGFKHSAVVTS 4151
Query: 280 EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGE-IYTW 338
+G++F +G G GRLG + P+ V L G + V+CG T A++ G ++ +
Sbjct: 4152 DGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAF 4211
Query: 339 GHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTF 398
G ++G +G ++S P+K+ D L G+ + KVACG + ++ G ++T+G
Sbjct: 4212 GDGDYGKLGLGNSTAKSS--PQKI-DVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 4268
Query: 399 GVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
L G +N ++P+++ L G+ ++ VA G HT A+ SN G ++ WG
Sbjct: 4269 IGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALA--------SN---GDVYAWGS 4317
Query: 459 ADKGRLG--HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLG-KVYTMGSAVHGQ 515
+G+LG H + R+ PT VT L + Q S GR + T G +V Q
Sbjct: 4318 NSEGQLGLGHTNHVRE--PTLVTGLQGKNVRQISAGRCHSAAWTAPPVPPRAPGVSVPLQ 4375
Query: 516 LGNP 519
LG P
Sbjct: 4376 LGLP 4379
Score = 290 (107.1 bits), Expect = 2.1e-17, Sum P(3) = 2.1e-17
Identities = 83/307 (27%), Positives = 149/307 (48%)
Query: 334 EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
++Y WG HG + E R+ +P + + +V CG+ T ++ +G +
Sbjct: 3998 DVYLWGAGRHGQ--LAEA-GRNVMVPAAA-PSFS--QAQQVICGQNCTFVIQANGTVLAC 4051
Query: 394 GDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSV--ACGP-WHTAAIVDIMVDRCKSNAIG 450
G+G++G LG GN ++ + +L+G V + +CG H+ A+ +
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----------S 4100
Query: 451 GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
G++F+WGD D G+LGH + +R+ P + L + VQ SCG + +T GK++T G+
Sbjct: 4101 GEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGN 4160
Query: 511 AVHGQLG-----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
+G+LG N K +R +T +EG + G++ + +AV G V+ +G
Sbjct: 4161 GDYGRLGLGNTSNKKLPER-VTALEGYQIGQVACGLN---HTLAVSADGSMVWAFGDGDY 4216
Query: 566 GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFG 625
G+LGLG+S + +P ++ L ++ V CG+ + A+ + Q +P G
Sbjct: 4217 GKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL--IGLPEG 4274
Query: 626 FRRKKHN 632
R + HN
Sbjct: 4275 -RARNHN 4280
Score = 265 (98.3 bits), Expect = 3.0e-14, Sum P(3) = 3.0e-14
Identities = 82/287 (28%), Positives = 141/287 (49%)
Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQN-ISLGAKHAALVT 278
+V WG+G D G G+ S K PKL++ + V +S G +H+A VT
Sbjct: 478 EVFSWGDG----DYGKLGHGNSSTQK------YPKLIQGPLQGKVVVCVSAGYRHSAAVT 527
Query: 279 KEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGE-IYT 337
++GE++ WGEG GRLGH + + P LV+ +S NV VSCG T AL+K G +++
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWS 585
Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
+G ++G +G + + P K+ + L G+ + KV G + ++++GQ++ +G G
Sbjct: 586 FGGGDNGK--LGHGDTNRVYKP-KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA 642
Query: 398 FGVLGHGNLQNVS-QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
LG G+ + + +PK +E L ++ V+ G H C + + +++ W
Sbjct: 643 --CLGCGSSEATALRPKLIEELAATRIVDVSIGDSH-----------CLALSHDNEVYAW 689
Query: 457 GDADKGRLGHVDGERKLL-PTCVTRLVDFDFVQASCGRMLTVGLTGL 502
G+ G+ G + + P V+ L Q S G ++ T L
Sbjct: 690 GNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTAL 736
Score = 256 (95.2 bits), Expect = 2.6e-13, Sum P(3) = 2.6e-13
Identities = 69/227 (30%), Positives = 118/227 (51%)
Query: 220 DVMIWGEGVLGGDIGGAVDG-SVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVT 278
++ WGEG D G G S S+N +P L++ + +V +S G+ H ++
Sbjct: 531 ELYTWGEG----DFGRLGHGDSNSRN-------IPTLVKD--ISNVGEVSCGSSHTIALS 577
Query: 279 KEGE-VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
K+G V+ +G G +G+LGH V PK++E L G+ ++ V G + ALT +G++Y
Sbjct: 578 KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYA 637
Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
WG GA L G S + L KL + L R+ V+ G+ H +S +++ +G+ +
Sbjct: 638 WGC---GACL-GCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNS 693
Query: 398 FGVLGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
G G GN +++PK+V L G+ ++ ++ G H+ A + DR
Sbjct: 694 MGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDR 740
Score = 203 (76.5 bits), Expect = 2.6e-08, Sum P(3) = 2.6e-08
Identities = 70/242 (28%), Positives = 114/242 (47%)
Query: 378 EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
+WH + ++ +G G G L +NV P S + + V CG T I
Sbjct: 3990 DWH---LGGKCDVYLWGAGRHGQLAEAG-RNVMVPAAAPSFS--QAQQVICGQNCTFVI- 4042
Query: 438 DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ--ASCGRM- 494
++N G + G+ GRLG + + + T ++ L F Q SCG
Sbjct: 4043 -------QAN---GTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDG 4092
Query: 495 LTVGLTGLGKVYTMGSAVHGQLGNPKA-KDRSITVVEGKLKEEFVKGISSGSYHVAVLTS 553
++ LT G+V++ G +G+LG+ + + R +E EE V+ +S G H AV+TS
Sbjct: 4093 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQ-MSCGFKHSAVVTS 4151
Query: 554 GGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSI--SV 611
G ++T+G G+LGLG++ ++ P V AL Q+ V CG + T A+ S+ +
Sbjct: 4152 DGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAF 4211
Query: 612 GD 613
GD
Sbjct: 4212 GD 4213
Score = 46 (21.3 bits), Expect = 2.1e-17, Sum P(3) = 2.1e-17
Identities = 12/50 (24%), Positives = 20/50 (40%)
Query: 314 INVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLF 363
+ + S + G+F TC L ++G N L E + P +F
Sbjct: 2126 LTLSSFTQGDFITCVLDMEARTISFGKNGEEPKLAFEDVDAAELYPCVMF 2175
Score = 44 (20.5 bits), Expect = 3.4e-17, Sum P(3) = 3.4e-17
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 316 VQSVSCG-EFQTCALTKSGEIYTWGHNNHGADL 347
+Q VS E C L ++G+I T G G L
Sbjct: 2030 IQEVSFDPEKAQCCLVENGQILTHGSGGKGYGL 2062
Score = 41 (19.5 bits), Expect = 2.6e-27, Sum P(2) = 2.6e-27
Identities = 14/45 (31%), Positives = 23/45 (51%)
Query: 980 SGQKGLKRVR-FSRRRFTEKAAERWWEENQVVVYQKYGIEEYSNL 1023
SGQK LK+ R R E E+ +E + + ++G+ + S L
Sbjct: 2251 SGQK-LKKSRSVQSREENEMREEKESKEEEKGKHTRHGLADLSEL 2294
Score = 41 (19.5 bits), Expect = 1.7e-25, Sum P(3) = 1.7e-25
Identities = 11/51 (21%), Positives = 25/51 (49%)
Query: 668 CYNH-LQKITHSGRL-LKQENQSPRNLLNLQGSLSEEVKEEKGALTPSRGQ 716
C N + + H ++ +K+ Q + ++Q E++EEK + +G+
Sbjct: 2232 CINKKMMERLHKIKICIKESGQKLKKSRSVQSREENEMREEKESKEEEKGK 2282
Score = 39 (18.8 bits), Expect = 1.1e-16, Sum P(3) = 1.1e-16
Identities = 15/48 (31%), Positives = 21/48 (43%)
Query: 309 ECLSGINVQSVSCG---EFQTCALTKSGEIYTWGHNNHGADLVGERRS 353
EC SG N + CG E TKS + + DL+G++ S
Sbjct: 3025 ECGSG-NPYYLLCGTCREKYLAMKTKSKSTSSERYKGQAPDLIGKQDS 3071
Score = 37 (18.1 bits), Expect = 7.6e-36, Sum P(2) = 7.6e-36
Identities = 7/18 (38%), Positives = 14/18 (77%)
Query: 1005 EENQVVVYQKYGIEEYSN 1022
E++Q+V + + +EE+SN
Sbjct: 4749 EQHQLVQWFWHTLEEFSN 4766
Score = 37 (18.1 bits), Expect = 1.7e-25, Sum P(3) = 1.7e-25
Identities = 5/8 (62%), Positives = 7/8 (87%)
Query: 999 AAERWWEE 1006
+AE WWE+
Sbjct: 3716 SAEGWWEQ 3723
>UNIPROTKB|J9NWD8 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR017986 InterPro:IPR000569
InterPro:IPR001680 InterPro:IPR003877 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00622 PROSITE:PS50082 PROSITE:PS50237
PROSITE:PS50294 SMART:SM00119 SMART:SM00320 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016567 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449
PROSITE:PS50188 SUPFAM:SSF56204 GeneTree:ENSGT00700000104312
EMBL:AAEX03016202 Ensembl:ENSCAFT00000042764 Uniprot:J9NWD8
Length = 4118
Score = 451 (163.8 bits), Expect = 1.1e-35, Sum P(2) = 1.1e-35
Identities = 114/347 (32%), Positives = 176/347 (50%)
Query: 265 QNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSV--SCG 322
Q + G ++ G V GEG GRLG + D+ ++ L G V + SCG
Sbjct: 3287 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 3346
Query: 323 -EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT 381
+ + ALT+SGE+++WG ++G +G S PR++ + L G V +++CG H+
Sbjct: 3347 SDGHSMALTESGEVFSWGDGDYGK--LGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS 3403
Query: 382 AIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMV 441
A+V++ G+LFT+G+G +G LG GN N P+ V +L G ++ VACG HT A+
Sbjct: 3404 AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV----- 3458
Query: 442 DRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTG 501
+A G ++ +GD D G+LG + K P V L + +CG +V LT
Sbjct: 3459 -----SADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTK 3513
Query: 502 LGKVYTMGSAVHGQLGNPKAKDRS------ITVVEGKLKEEFVKGISSGSYHVAVLTSGG 555
G VYT G +G P+ + R+ I V+ G + E+ ++ G+ H L S G
Sbjct: 3514 DGHVYTFGQ--DRLIGLPEGRARNHNRPQQIPVLAGVVIED----VAVGAEHTLALASTG 3567
Query: 556 SVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
VY WG N+ GQLGLG + PT V L+ + + + G +AA
Sbjct: 3568 DVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAA 3614
Score = 341 (125.1 bits), Expect = 7.6e-24, Sum P(2) = 7.6e-24
Identities = 95/327 (29%), Positives = 160/327 (48%)
Query: 282 EVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
+V+ WG G+ G+L + +V P S Q V CG+ T + +G + G
Sbjct: 3255 DVYLWGAGRHGQLA-EAGRNVMVPAAAPSFS--QAQQVICGQNCTFVIQANGTVLACGEG 3311
Query: 342 NHGADLVGERRSRS-HWLPRKLFDTLDGVRVSKV--ACG-EWHTAIVSTSGQLFTYGDGT 397
++G +G+ S H L + L G V+++ +CG + H+ ++ SG++F++GDG
Sbjct: 3312 SYGR--LGQGNSDDLHVLT--VISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGD 3367
Query: 398 FGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
+G LGHGN +P+++E+L+G +V ++CG H+A + GKLFT+G
Sbjct: 3368 YGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTS-----------DGKLFTFG 3416
Query: 458 DADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK-VYTMGSAVHGQL 516
+ D GRLG + K LP VT L + Q +CG T+ ++ G V+ G +G+L
Sbjct: 3417 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKL 3476
Query: 517 GNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQER 576
G + +S L +K ++ G+ LT G VYT+G++ L G ++
Sbjct: 3477 GLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 3536
Query: 577 ETPTFVEALRDRQVESVVCGSSITAAI 603
P + L +E V G+ T A+
Sbjct: 3537 NRPQQIPVLAGVVIEDVAVGAEHTLAL 3563
Score = 331 (121.6 bits), Expect = 8.9e-23, Sum P(2) = 8.9e-23
Identities = 100/328 (30%), Positives = 161/328 (49%)
Query: 273 HAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKS 332
H+ +T+ GEVF WG+G G+LGH + P+ +E L G V +SCG + +T
Sbjct: 3350 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD 3409
Query: 333 GEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQL-F 391
G+++T+G+ ++G +G ++ LP ++ L+G ++ +VACG HT VS G + +
Sbjct: 3410 GKLFTFGNGDYGRLGLGNTSNKK--LPERV-TALEGYQIGQVACGLNHTLAVSADGSMVW 3466
Query: 392 TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
+GDG +G LG GN S P++V+ L G+ +K VACG + A+ G
Sbjct: 3467 AFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTK-----------DG 3515
Query: 452 KLFTWGDADKGRLGHVDGERKL--LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMG 509
++T+G D+ +G +G + P + L + G T+ L G VY G
Sbjct: 3516 HVYTFGQ-DR-LIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWG 3573
Query: 510 SAVHGQLG----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGG-SVYTWGKNA 564
S GQLG N + +TV++GK ++ IS+G H A T+ G +
Sbjct: 3574 SNSEGQLGLGHTNHVREPTLVTVLQGKN----IRQISAGRCHSAAWTAPPVPPRAPGVSV 3629
Query: 565 NGQLGLGDSQERETPTFVEALRDRQVES 592
QLGL D+ P ALR+ + +
Sbjct: 3630 PLQLGLPDA----VPPQYGALREVSIHT 3653
Score = 298 (110.0 bits), Expect = 3.0e-19, Sum P(2) = 3.0e-19
Identities = 90/306 (29%), Positives = 149/306 (48%)
Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
+V WG+G D G G+ + + P+ +E+ +V +S G KH+A+VT
Sbjct: 3359 EVFSWGDG----DYGKLGHGNSDRQRR------PRQIEALQGEEVVQMSCGFKHSAVVTS 3408
Query: 280 EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGE-IYTW 338
+G++F +G G GRLG + P+ V L G + V+CG T A++ G ++ +
Sbjct: 3409 DGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAF 3468
Query: 339 GHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTF 398
G ++G +G ++S P+K+ D L G+ + KVACG + ++ G ++T+G
Sbjct: 3469 GDGDYGKLGLGNSTAKSS--PQKV-DVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 3525
Query: 399 GVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
L G +N ++P+++ L G+ ++ VA G HT A+ A G ++ WG
Sbjct: 3526 IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLAL-----------ASTGDVYAWGS 3574
Query: 459 ADKGRLG--HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLG-KVYTMGSAVHGQ 515
+G+LG H + R+ PT VT L + Q S GR + T G +V Q
Sbjct: 3575 NSEGQLGLGHTNHVRE--PTLVTVLQGKNIRQISAGRCHSAAWTAPPVPPRAPGVSVPLQ 3632
Query: 516 LGNPKA 521
LG P A
Sbjct: 3633 LGLPDA 3638
Score = 291 (107.5 bits), Expect = 9.9e-18, Sum P(3) = 9.9e-18
Identities = 84/307 (27%), Positives = 149/307 (48%)
Query: 334 EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
++Y WG HG + E R+ +P + + +V CG+ T ++ +G +
Sbjct: 3255 DVYLWGAGRHGQ--LAEA-GRNVMVPAAA-PSFS--QAQQVICGQNCTFVIQANGTVLAC 3308
Query: 394 GDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSV--ACGP-WHTAAIVDIMVDRCKSNAIG 450
G+G++G LG GN ++ + +L+G V + +CG H+ A+ +
Sbjct: 3309 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----------S 3357
Query: 451 GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
G++F+WGD D G+LGH + +R+ P + L + VQ SCG + +T GK++T G+
Sbjct: 3358 GEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGN 3417
Query: 511 AVHGQLG-----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
+G+LG N K +R +T +EG + G++ + +AV G V+ +G
Sbjct: 3418 GDYGRLGLGNTSNKKLPER-VTALEGYQIGQVACGLN---HTLAVSADGSMVWAFGDGDY 3473
Query: 566 GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFG 625
G+LGLG+S + +P V+ L ++ V CG+ + A+ + Q +P G
Sbjct: 3474 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL--IGLPEG 3531
Query: 626 FRRKKHN 632
R + HN
Sbjct: 3532 -RARNHN 3537
Score = 203 (76.5 bits), Expect = 1.6e-08, Sum P(3) = 1.6e-08
Identities = 70/242 (28%), Positives = 114/242 (47%)
Query: 378 EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
+WH + ++ +G G G L +NV P S + + V CG T I
Sbjct: 3247 DWH---LGGKCDVYLWGAGRHGQLAEAG-RNVMVPAAAPSFS--QAQQVICGQNCTFVI- 3299
Query: 438 DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ--ASCGRM- 494
++N G + G+ GRLG + + + T ++ L F Q SCG
Sbjct: 3300 -------QAN---GTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDG 3349
Query: 495 LTVGLTGLGKVYTMGSAVHGQLGNPKA-KDRSITVVEGKLKEEFVKGISSGSYHVAVLTS 553
++ LT G+V++ G +G+LG+ + + R +E EE V+ +S G H AV+TS
Sbjct: 3350 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQ-MSCGFKHSAVVTS 3408
Query: 554 GGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSI--SV 611
G ++T+G G+LGLG++ ++ P V AL Q+ V CG + T A+ S+ +
Sbjct: 3409 DGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAF 3468
Query: 612 GD 613
GD
Sbjct: 3469 GD 3470
Score = 46 (21.3 bits), Expect = 9.9e-18, Sum P(3) = 9.9e-18
Identities = 12/50 (24%), Positives = 20/50 (40%)
Query: 314 INVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLF 363
+ + S + G+F TC L ++G N L E + P +F
Sbjct: 1433 LTLSSFTQGDFITCVLDMEARTISFGKNGEEPKLAFEDVDAAELYPCVMF 1482
Score = 44 (20.5 bits), Expect = 1.6e-17, Sum P(3) = 1.6e-17
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 316 VQSVSCG-EFQTCALTKSGEIYTWGHNNHGADL 347
+Q VS E C L ++G+I T G G L
Sbjct: 1337 IQEVSFDPEKAQCCLVENGQILTHGSGGKGYGL 1369
Score = 41 (19.5 bits), Expect = 5.0e-08, Sum P(3) = 5.0e-08
Identities = 7/23 (30%), Positives = 15/23 (65%)
Query: 359 PRKLFDTLDGVRVSKVACGEWHT 381
P+K+ LDG+ + +++ G H+
Sbjct: 16 PKKV-SGLDGIAIQQISAGTSHS 37
Score = 39 (18.8 bits), Expect = 5.1e-17, Sum P(3) = 5.1e-17
Identities = 16/48 (33%), Positives = 23/48 (47%)
Query: 309 ECLSGINVQSVSCGEFQT--CAL-TKSGEIYTWGHNNHGADLVGERRS 353
EC SG N + CG + AL TKS + + DL+G++ S
Sbjct: 2282 ECGSG-NPYYLLCGSCREKYLALKTKSKTTSSERYKGQAPDLIGKQDS 2328
Score = 37 (18.1 bits), Expect = 1.1e-35, Sum P(2) = 1.1e-35
Identities = 7/18 (38%), Positives = 14/18 (77%)
Query: 1005 EENQVVVYQKYGIEEYSN 1022
E++Q+V + + +EE+SN
Sbjct: 4006 EQHQLVQWFWHTLEEFSN 4023
>UNIPROTKB|F1MNS0 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR017986 InterPro:IPR000569 InterPro:IPR001680
InterPro:IPR003877 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00622
PROSITE:PS50082 PROSITE:PS50237 PROSITE:PS50294 SMART:SM00119
SMART:SM00320 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016567
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 SUPFAM:SSF56204
OMA:HHYQDGI GeneTree:ENSGT00700000104312 EMBL:DAAA02028744
EMBL:DAAA02028745 EMBL:DAAA02028746 IPI:IPI00924381
Ensembl:ENSBTAT00000061038 ArrayExpress:F1MNS0 Uniprot:F1MNS0
Length = 4857
Score = 452 (164.2 bits), Expect = 1.3e-35, Sum P(2) = 1.3e-35
Identities = 115/347 (33%), Positives = 176/347 (50%)
Query: 265 QNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSV--SCG 322
Q + G ++ G V GEG GRLG + D+ ++ L G V + SCG
Sbjct: 4025 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4084
Query: 323 -EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT 381
+ + ALT+SGE+++WG ++G +G S PR++ + L G V +++CG H+
Sbjct: 4085 SDGHSMALTESGEVFSWGDGDYGK--LGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS 4141
Query: 382 AIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMV 441
A+V++ G+LFT+G+G +G LG GN N P+ V +L G ++ VACG HT A+
Sbjct: 4142 AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV----- 4196
Query: 442 DRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTG 501
+A G ++ +GD D G+LG + K P V L + +CG +V LT
Sbjct: 4197 -----SADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTK 4251
Query: 502 LGKVYTMGSAVHGQLGNPKAKDRS------ITVVEGKLKEEFVKGISSGSYHVAVLTSGG 555
G VYT G +G P+ + R+ I V+ G + E+ ++ G+ H L S G
Sbjct: 4252 DGHVYTFGQ--DRLIGLPEGRARNHNRPQQIPVLAGVVIED----VAVGAEHTLALASTG 4305
Query: 556 SVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
VY WG N+ GQLGLG + PT V L+ + V + G +AA
Sbjct: 4306 DVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCHSAA 4352
Score = 366 (133.9 bits), Expect = 1.1e-26, Sum P(2) = 1.1e-26
Identities = 101/350 (28%), Positives = 170/350 (48%)
Query: 276 LVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEI 335
+V++ EV+ WG +L + PKL S + Q++ G++ T ++ G +
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFS--DAQTIEAGQYCTFVISTDGSV 424
Query: 336 YTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR-VSKVACGEWHTAIVSTSGQLFTYG 394
G ++G +G+ ++S L + F+ ++ VS + HT +T G++F++G
Sbjct: 425 RACGKGSYGRLGLGDSNNQST-LKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWG 483
Query: 395 DGTFGVLGHGNLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKL 453
DG +G LGHGN PK ++ L+G V V+ G H+AA+ + D G+L
Sbjct: 484 DGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE---D--------GEL 532
Query: 454 FTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK-VYTMGSAV 512
+TWG+ D GRLGH D + +PT V + + + SCG T+ L+ G+ V++ G
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFGGGD 590
Query: 513 HGQLGNPKA-KDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLG 571
+G+LG+ + V+E L+ F++ + +GS LTS G VY WG A LG G
Sbjct: 591 NGKLGHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG 647
Query: 572 DSQERET-PTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQC 620
S+ P +E L ++ + G S A+ + +S QC
Sbjct: 648 SSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQC 697
Score = 358 (131.1 bits), Expect = 9.8e-23, Sum P(4) = 9.8e-23
Identities = 112/362 (30%), Positives = 168/362 (46%)
Query: 246 TQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG-HKVNMDVSC 304
TQ L PKL S D Q I G +++ +G V G+G GRLG N +
Sbjct: 389 TQEKILQPKLAPS--FSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTL 446
Query: 305 PKLV-ECLSGINVQSVSCG-EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL 362
KL E I S S G + T A T GE+++WG ++G +G S + P+ +
Sbjct: 447 KKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGK--LGHGNSSTQKYPKLI 504
Query: 363 FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLK 422
L G V V+ G H+A V+ G+L+T+G+G FG LGHG+ + + P V+ +
Sbjct: 505 QGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN-- 562
Query: 423 VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLV 482
V V+CG HT A+ + G ++++G D G+LGH D R P + L
Sbjct: 563 VGEVSCGSSHTIAL----------SKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQ 612
Query: 483 DFDFVQASC-GRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGI 541
F++ C G ++ LT G+VY G G+ +A ++E +L + I
Sbjct: 613 GM-FIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRPKLIE-ELAATRIVDI 670
Query: 542 SSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGSSIT 600
S G H L+ VY WG N+ GQ G G+S T P V L ++ + G+S +
Sbjct: 671 SIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHS 730
Query: 601 AA 602
A
Sbjct: 731 LA 732
Score = 341 (125.1 bits), Expect = 1.1e-23, Sum P(2) = 1.1e-23
Identities = 95/327 (29%), Positives = 160/327 (48%)
Query: 282 EVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
+V+ WG G+ G+L + +V P S Q V CG+ T + +G + G
Sbjct: 3993 DVYLWGAGRHGQLA-EAGRNVMVPAAAPSFS--QAQQVICGQNCTFVIQANGTVLACGEG 4049
Query: 342 NHGADLVGERRSRS-HWLPRKLFDTLDGVRVSKV--ACG-EWHTAIVSTSGQLFTYGDGT 397
++G +G+ S H L + L G V+++ +CG + H+ ++ SG++F++GDG
Sbjct: 4050 SYGR--LGQGNSDDLHVLT--VISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGD 4105
Query: 398 FGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
+G LGHGN +P+++E+L+G +V ++CG H+A + GKLFT+G
Sbjct: 4106 YGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTS-----------DGKLFTFG 4154
Query: 458 DADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK-VYTMGSAVHGQL 516
+ D GRLG + K LP VT L + Q +CG T+ ++ G V+ G +G+L
Sbjct: 4155 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKL 4214
Query: 517 GNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQER 576
G + +S L +K ++ G+ LT G VYT+G++ L G ++
Sbjct: 4215 GLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4274
Query: 577 ETPTFVEALRDRQVESVVCGSSITAAI 603
P + L +E V G+ T A+
Sbjct: 4275 NRPQQIPVLAGVVIEDVAVGAEHTLAL 4301
Score = 332 (121.9 bits), Expect = 1.0e-22, Sum P(2) = 1.0e-22
Identities = 101/328 (30%), Positives = 161/328 (49%)
Query: 273 HAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKS 332
H+ +T+ GEVF WG+G G+LGH + P+ +E L G V +SCG + +T
Sbjct: 4088 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD 4147
Query: 333 GEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQL-F 391
G+++T+G+ ++G +G ++ LP ++ L+G ++ +VACG HT VS G + +
Sbjct: 4148 GKLFTFGNGDYGRLGLGNTSNKK--LPERV-TALEGYQIGQVACGLNHTLAVSADGSMVW 4204
Query: 392 TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
+GDG +G LG GN S P++V+ L G+ +K VACG + A+ G
Sbjct: 4205 AFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTK-----------DG 4253
Query: 452 KLFTWGDADKGRLGHVDGERKL--LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMG 509
++T+G D+ +G +G + P + L + G T+ L G VY G
Sbjct: 4254 HVYTFGQ-DR-LIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWG 4311
Query: 510 SAVHGQLG----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGG-SVYTWGKNA 564
S GQLG N + +TV++GK V+ IS+G H A T+ G +
Sbjct: 4312 SNSEGQLGLGHTNHVREPTLVTVLQGKN----VRQISAGRCHSAAWTAPPVPPRAPGVSV 4367
Query: 565 NGQLGLGDSQERETPTFVEALRDRQVES 592
QLGL D+ P ALR+ + +
Sbjct: 4368 PLQLGLPDT----VPPQYGALREVSIHT 4391
Score = 298 (110.0 bits), Expect = 2.2e-16, Sum P(4) = 2.2e-16
Identities = 88/289 (30%), Positives = 138/289 (47%)
Query: 273 HAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVEC-LSGINVQSVSCGEFQTCALTK 331
H T EGEVF WG+G G+LGH + PKL++ L G V VS G + A+T+
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 332 SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQ-L 390
GE+YTWG + G +G S S +P + D + V +V+CG HT +S G+ +
Sbjct: 529 DGELYTWGEGDFGR--LGHGDSNSRNIPTLVKDISN---VGEVSCGSSHTIALSKDGRTV 583
Query: 391 FTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIG 450
+++G G G LGHG+ V +PK +E+L+G+ ++ V G + A+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTST----------- 632
Query: 451 GKLFTWGDADKGRLGHVDGERKLL-PTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMG 509
G+++ WG LG E L P + L V S G + L+ +VY G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWG 690
Query: 510 SAVHGQLGN-----PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTS 553
+ GQ G P K + ++ ++G ++ IS+G+ H T+
Sbjct: 691 NNSMGQCGQGNSTGPITKPKKVSGLDGIA----IQQISAGTSHSLAWTA 735
Score = 294 (108.6 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 89/304 (29%), Positives = 148/304 (48%)
Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
+V WG+G D G G+ + + P+ +E+ +V +S G KH+A+VT
Sbjct: 4097 EVFSWGDG----DYGKLGHGNSDRQRR------PRQIEALQGEEVVQMSCGFKHSAVVTS 4146
Query: 280 EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGE-IYTW 338
+G++F +G G GRLG + P+ V L G + V+CG T A++ G ++ +
Sbjct: 4147 DGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAF 4206
Query: 339 GHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTF 398
G ++G +G ++S P+K+ D L G+ + KVACG + ++ G ++T+G
Sbjct: 4207 GDGDYGKLGLGNSTAKSS--PQKV-DVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 4263
Query: 399 GVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
L G +N ++P+++ L G+ ++ VA G HT A+ A G ++ WG
Sbjct: 4264 IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLAL-----------ASTGDVYAWGS 4312
Query: 459 ADKGRLG--HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLG-KVYTMGSAVHGQ 515
+G+LG H + R+ PT VT L + Q S GR + T G +V Q
Sbjct: 4313 NSEGQLGLGHTNHVRE--PTLVTVLQGKNVRQISAGRCHSAAWTAPPVPPRAPGVSVPLQ 4370
Query: 516 LGNP 519
LG P
Sbjct: 4371 LGLP 4374
Score = 291 (107.5 bits), Expect = 1.7e-17, Sum P(3) = 1.7e-17
Identities = 84/307 (27%), Positives = 149/307 (48%)
Query: 334 EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
++Y WG HG + E R+ +P + + +V CG+ T ++ +G +
Sbjct: 3993 DVYLWGAGRHGQ--LAEA-GRNVMVPAAA-PSFS--QAQQVICGQNCTFVIQANGTVLAC 4046
Query: 394 GDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSV--ACGP-WHTAAIVDIMVDRCKSNAIG 450
G+G++G LG GN ++ + +L+G V + +CG H+ A+ +
Sbjct: 4047 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----------S 4095
Query: 451 GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
G++F+WGD D G+LGH + +R+ P + L + VQ SCG + +T GK++T G+
Sbjct: 4096 GEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGN 4155
Query: 511 AVHGQLG-----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
+G+LG N K +R +T +EG + G++ + +AV G V+ +G
Sbjct: 4156 GDYGRLGLGNTSNKKLPER-VTALEGYQIGQVACGLN---HTLAVSADGSMVWAFGDGDY 4211
Query: 566 GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFG 625
G+LGLG+S + +P V+ L ++ V CG+ + A+ + Q +P G
Sbjct: 4212 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL--IGLPEG 4269
Query: 626 FRRKKHN 632
R + HN
Sbjct: 4270 -RARNHN 4275
Score = 264 (98.0 bits), Expect = 7.8e-13, Sum P(4) = 7.8e-13
Identities = 81/287 (28%), Positives = 141/287 (49%)
Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQN-ISLGAKHAALVT 278
+V WG+G D G G+ S K PKL++ + V +S G +H+A VT
Sbjct: 478 EVFSWGDG----DYGKLGHGNSSTQK------YPKLIQGPLQGKVVVCVSAGYRHSAAVT 527
Query: 279 KEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGE-IYT 337
++GE++ WGEG GRLGH + + P LV+ +S NV VSCG T AL+K G +++
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWS 585
Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
+G ++G +G + + P K+ + L G+ + KV G + ++++GQ++ +G G
Sbjct: 586 FGGGDNGK--LGHGDTNRVYKP-KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA 642
Query: 398 FGVLGHGNLQNVS-QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
LG G+ + + +PK +E L ++ ++ G H C + + +++ W
Sbjct: 643 --CLGCGSSEATALRPKLIEELAATRIVDISIGDSH-----------CLALSHDNEVYAW 689
Query: 457 GDADKGRLGHVDGERKLL-PTCVTRLVDFDFVQASCGRMLTVGLTGL 502
G+ G+ G + + P V+ L Q S G ++ T L
Sbjct: 690 GNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTAL 736
Score = 260 (96.6 bits), Expect = 2.0e-12, Sum P(4) = 2.0e-12
Identities = 83/308 (26%), Positives = 142/308 (46%)
Query: 318 SVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
S+ G+ T ++++ E+Y WG N+ + G ++ L KL + + + G
Sbjct: 359 SIQTGD--TPIVSETCEVYVWGSNSSHQLVEG---TQEKILQPKLAPSFSDAQT--IEAG 411
Query: 378 EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEV--ESLRGLKVKSVACGP-WHTA 434
++ T ++ST G + G G++G LG G+ N S K++ E R +K S + G HT
Sbjct: 412 QYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTL 471
Query: 435 AIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQA-SCGR 493
A G++F+WGD D G+LGH + + P + + V S G
Sbjct: 472 AFTT-----------EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGY 520
Query: 494 MLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTS 553
+ +T G++YT G G+LG+ + R+I + + V +S GS H L+
Sbjct: 521 RHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHTIALSK 578
Query: 554 GG-SVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVG 612
G +V+++G NG+LG GD+ P +EAL+ + V GS + A+ +
Sbjct: 579 DGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAW 638
Query: 613 DQSSCSQC 620
+C C
Sbjct: 639 GCGACLGC 646
Score = 255 (94.8 bits), Expect = 6.6e-12, Sum P(4) = 6.6e-12
Identities = 68/227 (29%), Positives = 118/227 (51%)
Query: 220 DVMIWGEGVLGGDIGGAVDG-SVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVT 278
++ WGEG D G G S S+N +P L++ + +V +S G+ H ++
Sbjct: 531 ELYTWGEG----DFGRLGHGDSNSRN-------IPTLVKD--ISNVGEVSCGSSHTIALS 577
Query: 279 KEGE-VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
K+G V+ +G G +G+LGH V PK++E L G+ ++ V G + ALT +G++Y
Sbjct: 578 KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYA 637
Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
WG GA L G S + L KL + L R+ ++ G+ H +S +++ +G+ +
Sbjct: 638 WGC---GACL-GCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNS 693
Query: 398 FGVLGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
G G GN +++PK+V L G+ ++ ++ G H+ A + DR
Sbjct: 694 MGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDR 740
Score = 203 (76.5 bits), Expect = 2.6e-08, Sum P(3) = 2.6e-08
Identities = 70/242 (28%), Positives = 114/242 (47%)
Query: 378 EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
+WH + ++ +G G G L +NV P S + + V CG T I
Sbjct: 3985 DWH---LGGKCDVYLWGAGRHGQLAEAG-RNVMVPAAAPSFS--QAQQVICGQNCTFVI- 4037
Query: 438 DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ--ASCGRM- 494
++N G + G+ GRLG + + + T ++ L F Q SCG
Sbjct: 4038 -------QAN---GTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDG 4087
Query: 495 LTVGLTGLGKVYTMGSAVHGQLGNPKA-KDRSITVVEGKLKEEFVKGISSGSYHVAVLTS 553
++ LT G+V++ G +G+LG+ + + R +E EE V+ +S G H AV+TS
Sbjct: 4088 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQ-MSCGFKHSAVVTS 4146
Query: 554 GGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSI--SV 611
G ++T+G G+LGLG++ ++ P V AL Q+ V CG + T A+ S+ +
Sbjct: 4147 DGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAF 4206
Query: 612 GD 613
GD
Sbjct: 4207 GD 4208
Score = 46 (21.3 bits), Expect = 1.7e-17, Sum P(3) = 1.7e-17
Identities = 12/50 (24%), Positives = 20/50 (40%)
Query: 314 INVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLF 363
+ + S + G+F TC L ++G N L E + P +F
Sbjct: 2123 LTLSSFTQGDFITCVLDMEARTISFGKNGEEPKLAFEDVDAAELYPCVMF 2172
Score = 42 (19.8 bits), Expect = 4.3e-17, Sum P(3) = 4.3e-17
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 316 VQSVSCG-EFQTCALTKSGEIYTWGHNNHGADL 347
+Q VS E C + ++G+I T G G L
Sbjct: 2027 IQEVSFDPEKAQCCIVENGQILTHGSGGKGYGL 2059
Score = 40 (19.1 bits), Expect = 1.1e-26, Sum P(2) = 1.1e-26
Identities = 15/52 (28%), Positives = 29/52 (55%)
Query: 980 SGQKGLKRVR-FSRRRFTEKAAERWWEENQVVVYQKYGIEEYSNLNQNQMRS 1030
SGQK LK+ R R E E+ +E + + ++G+ ++L++ Q+R+
Sbjct: 2248 SGQK-LKKSRSVQSREENEMREEKENKEEEKGKHSRHGL---ADLSEPQLRT 2295
Score = 40 (19.1 bits), Expect = 1.4e-23, Sum P(4) = 1.4e-23
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 938 SGSVEDSKVARTEPQQKGTKASKLE 962
S S D++ T KGT +SK E
Sbjct: 2431 SESALDTRTGLTSDDVKGTTSSKSE 2455
Score = 39 (18.8 bits), Expect = 8.7e-17, Sum P(3) = 8.7e-17
Identities = 16/48 (33%), Positives = 23/48 (47%)
Query: 309 ECLSGINVQSVSCGEFQT--CAL-TKSGEIYTWGHNNHGADLVGERRS 353
EC SG N + CG + AL TKS + + DL+G++ S
Sbjct: 3020 ECGSG-NPYYLLCGSCREKYLALKTKSKATSSERYKGQAPDLIGKQDS 3066
Score = 38 (18.4 bits), Expect = 1.4e-23, Sum P(4) = 1.4e-23
Identities = 11/51 (21%), Positives = 24/51 (47%)
Query: 668 CYNH-LQKITHSGRL-LKQENQSPRNLLNLQGSLSEEVKEEKGALTPSRGQ 716
C N + + H ++ +K+ Q + ++Q E++EEK +G+
Sbjct: 2229 CINKKMMERLHKIKICIKESGQKLKKSRSVQSREENEMREEKENKEEEKGK 2279
Score = 37 (18.1 bits), Expect = 1.3e-35, Sum P(2) = 1.3e-35
Identities = 7/18 (38%), Positives = 14/18 (77%)
Query: 1005 EENQVVVYQKYGIEEYSN 1022
E++Q+V + + +EE+SN
Sbjct: 4745 EQHQLVQWFWHTLEEFSN 4762
>UNIPROTKB|F1S098 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005622 "intracellular" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR017986 InterPro:IPR000569 InterPro:IPR001680
InterPro:IPR003877 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00622
PROSITE:PS50082 PROSITE:PS50237 PROSITE:PS50294 SMART:SM00119
SMART:SM00320 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016567
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 SUPFAM:SSF56204
CTD:8925 KO:K10594 OMA:HHYQDGI GeneTree:ENSGT00700000104312
EMBL:CU550694 EMBL:CU582937 RefSeq:XP_001927286.4 UniGene:Ssc.96208
UniGene:Ssc.97542 Ensembl:ENSSSCT00000005038 GeneID:100153537
KEGG:ssc:100153537 Uniprot:F1S098
Length = 4859
Score = 452 (164.2 bits), Expect = 1.3e-35, Sum P(2) = 1.3e-35
Identities = 115/347 (33%), Positives = 176/347 (50%)
Query: 265 QNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSV--SCG 322
Q + G ++ G V GEG GRLG + D+ ++ L G V + SCG
Sbjct: 4028 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4087
Query: 323 -EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT 381
+ + ALT+SGE+++WG ++G +G S PR++ + L G V +++CG H+
Sbjct: 4088 SDGHSMALTESGEVFSWGDGDYGK--LGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS 4144
Query: 382 AIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMV 441
A+V++ G+LFT+G+G +G LG GN N P+ V +L G ++ VACG HT A+
Sbjct: 4145 AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV----- 4199
Query: 442 DRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTG 501
+A G ++ +GD D G+LG + K P V L + +CG +V LT
Sbjct: 4200 -----SADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTK 4254
Query: 502 LGKVYTMGSAVHGQLGNPKAKDRS------ITVVEGKLKEEFVKGISSGSYHVAVLTSGG 555
G VYT G +G P+ + R+ I V+ G + E+ ++ G+ H L S G
Sbjct: 4255 DGHVYTFGQ--DRLIGLPEGRARNHNRPQQIPVLAGVVIED----VAVGAEHTLALASTG 4308
Query: 556 SVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
VY WG N+ GQLGLG + PT V L+ + V + G +AA
Sbjct: 4309 DVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCHSAA 4355
Score = 370 (135.3 bits), Expect = 3.3e-27, Sum P(2) = 3.3e-27
Identities = 103/358 (28%), Positives = 173/358 (48%)
Query: 268 SLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTC 327
S+ A +V++ EV+ WG +L + PKL S + Q++ G++ T
Sbjct: 359 SIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFS--DAQTIEAGQYCTF 416
Query: 328 ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR-VSKVACGEWHTAIVST 386
++ G + G ++G +G+ ++S L + F+ ++ VS + HT +T
Sbjct: 417 VISTDGSVRACGKGSYGRLGLGDSNNQST-LKKLTFEPHRSIKKVSSSKGSDGHTLAFTT 475
Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCK 445
G++F++GDG +G LGHGN PK ++ L+G V V+ G H+AA+ + D
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE---D--- 529
Query: 446 SNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK- 504
G+L+TWG+ D GRLGH D + +PT V + + + SCG T+ L+ G+
Sbjct: 530 -----GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRT 582
Query: 505 VYTMGSAVHGQLGNPKA-KDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKN 563
V++ G +G+LG+ + V+E L+ F++ + +GS LTS G VY WG
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQSSLALTSTGQVYAWGCG 641
Query: 564 ANGQLGLGDSQERET-PTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQC 620
A LG G S+ P +E L ++ + G S A+ + +S QC
Sbjct: 642 AC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQC 697
Score = 358 (131.1 bits), Expect = 4.1e-24, Sum P(3) = 4.1e-24
Identities = 112/362 (30%), Positives = 168/362 (46%)
Query: 246 TQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG-HKVNMDVSC 304
TQ L PKL S D Q I G +++ +G V G+G GRLG N +
Sbjct: 389 TQEKILQPKLAPS--FSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTL 446
Query: 305 PKLV-ECLSGINVQSVSCG-EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL 362
KL E I S S G + T A T GE+++WG ++G +G S + P+ +
Sbjct: 447 KKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGK--LGHGNSSTQKYPKLI 504
Query: 363 FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLK 422
L G V V+ G H+A V+ G+L+T+G+G FG LGHG+ + + P V+ +
Sbjct: 505 QGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN-- 562
Query: 423 VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLV 482
V V+CG HT A+ + G ++++G D G+LGH D R P + L
Sbjct: 563 VGEVSCGSSHTIAL----------SKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQ 612
Query: 483 DFDFVQASC-GRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGI 541
F++ C G ++ LT G+VY G G+ +A ++E +L + I
Sbjct: 613 GM-FIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRPKLIE-ELAATRIVDI 670
Query: 542 SSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGSSIT 600
S G H L+ VY WG N+ GQ G G+S T P V L ++ + G+S +
Sbjct: 671 SIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHS 730
Query: 601 AA 602
A
Sbjct: 731 LA 732
Score = 341 (125.1 bits), Expect = 1.1e-23, Sum P(2) = 1.1e-23
Identities = 95/327 (29%), Positives = 160/327 (48%)
Query: 282 EVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
+V+ WG G+ G+L + +V P S Q V CG+ T + +G + G
Sbjct: 3996 DVYLWGAGRHGQLA-EAGRNVMVPAAAPSFS--QAQQVICGQNCTFVIQANGTVLACGEG 4052
Query: 342 NHGADLVGERRSRS-HWLPRKLFDTLDGVRVSKV--ACG-EWHTAIVSTSGQLFTYGDGT 397
++G +G+ S H L + L G V+++ +CG + H+ ++ SG++F++GDG
Sbjct: 4053 SYGR--LGQGNSDDLHVLT--VISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGD 4108
Query: 398 FGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
+G LGHGN +P+++E+L+G +V ++CG H+A + GKLFT+G
Sbjct: 4109 YGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTS-----------DGKLFTFG 4157
Query: 458 DADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK-VYTMGSAVHGQL 516
+ D GRLG + K LP VT L + Q +CG T+ ++ G V+ G +G+L
Sbjct: 4158 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKL 4217
Query: 517 GNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQER 576
G + +S L +K ++ G+ LT G VYT+G++ L G ++
Sbjct: 4218 GLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4277
Query: 577 ETPTFVEALRDRQVESVVCGSSITAAI 603
P + L +E V G+ T A+
Sbjct: 4278 NRPQQIPVLAGVVIEDVAVGAEHTLAL 4304
Score = 332 (121.9 bits), Expect = 1.0e-22, Sum P(2) = 1.0e-22
Identities = 101/328 (30%), Positives = 161/328 (49%)
Query: 273 HAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKS 332
H+ +T+ GEVF WG+G G+LGH + P+ +E L G V +SCG + +T
Sbjct: 4091 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD 4150
Query: 333 GEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQL-F 391
G+++T+G+ ++G +G ++ LP ++ L+G ++ +VACG HT VS G + +
Sbjct: 4151 GKLFTFGNGDYGRLGLGNTSNKK--LPERV-TALEGYQIGQVACGLNHTLAVSADGSMVW 4207
Query: 392 TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
+GDG +G LG GN S P++V+ L G+ +K VACG + A+ G
Sbjct: 4208 AFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTK-----------DG 4256
Query: 452 KLFTWGDADKGRLGHVDGERKL--LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMG 509
++T+G D+ +G +G + P + L + G T+ L G VY G
Sbjct: 4257 HVYTFGQ-DR-LIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWG 4314
Query: 510 SAVHGQLG----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGG-SVYTWGKNA 564
S GQLG N + +TV++GK V+ IS+G H A T+ G +
Sbjct: 4315 SNSEGQLGLGHTNHVREPTLVTVLQGKN----VRQISAGRCHSAAWTAPPVPPRAPGVSV 4370
Query: 565 NGQLGLGDSQERETPTFVEALRDRQVES 592
QLGL D+ P ALR+ + +
Sbjct: 4371 PLQLGLPDA----VPPQYGALREVSIHT 4394
Score = 297 (109.6 bits), Expect = 5.4e-19, Sum P(2) = 5.4e-19
Identities = 90/306 (29%), Positives = 149/306 (48%)
Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
+V WG+G D G G+ + + P+ +E+ +V +S G KH+A+VT
Sbjct: 4100 EVFSWGDG----DYGKLGHGNSDRQRR------PRQIEALQGEEVVQMSCGFKHSAVVTS 4149
Query: 280 EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGE-IYTW 338
+G++F +G G GRLG + P+ V L G + V+CG T A++ G ++ +
Sbjct: 4150 DGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAF 4209
Query: 339 GHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTF 398
G ++G +G ++S P+K+ D L G+ + KVACG + ++ G ++T+G
Sbjct: 4210 GDGDYGKLGLGNSTAKSS--PQKV-DVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 4266
Query: 399 GVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
L G +N ++P+++ L G+ ++ VA G HT A+ A G ++ WG
Sbjct: 4267 IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLAL-----------ASTGDVYAWGS 4315
Query: 459 ADKGRLG--HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLG-KVYTMGSAVHGQ 515
+G+LG H + R+ PT VT L + Q S GR + T G +V Q
Sbjct: 4316 NSEGQLGLGHTNHVRE--PTLVTVLQGKNVRQISAGRCHSAAWTAPPVPPRAPGVSVPLQ 4373
Query: 516 LGNPKA 521
LG P A
Sbjct: 4374 LGLPDA 4379
Score = 291 (107.5 bits), Expect = 1.7e-17, Sum P(3) = 1.7e-17
Identities = 84/307 (27%), Positives = 149/307 (48%)
Query: 334 EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
++Y WG HG + E R+ +P + + +V CG+ T ++ +G +
Sbjct: 3996 DVYLWGAGRHGQ--LAEA-GRNVMVPAAA-PSFS--QAQQVICGQNCTFVIQANGTVLAC 4049
Query: 394 GDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSV--ACGP-WHTAAIVDIMVDRCKSNAIG 450
G+G++G LG GN ++ + +L+G V + +CG H+ A+ +
Sbjct: 4050 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----------S 4098
Query: 451 GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
G++F+WGD D G+LGH + +R+ P + L + VQ SCG + +T GK++T G+
Sbjct: 4099 GEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGN 4158
Query: 511 AVHGQLG-----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
+G+LG N K +R +T +EG + G++ + +AV G V+ +G
Sbjct: 4159 GDYGRLGLGNTSNKKLPER-VTALEGYQIGQVACGLN---HTLAVSADGSMVWAFGDGDY 4214
Query: 566 GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFG 625
G+LGLG+S + +P V+ L ++ V CG+ + A+ + Q +P G
Sbjct: 4215 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL--IGLPEG 4272
Query: 626 FRRKKHN 632
R + HN
Sbjct: 4273 -RARNHN 4278
Score = 264 (98.0 bits), Expect = 3.8e-14, Sum P(3) = 3.8e-14
Identities = 81/287 (28%), Positives = 141/287 (49%)
Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQN-ISLGAKHAALVT 278
+V WG+G D G G+ S K PKL++ + V +S G +H+A VT
Sbjct: 478 EVFSWGDG----DYGKLGHGNSSTQK------YPKLIQGPLQGKVVVCVSAGYRHSAAVT 527
Query: 279 KEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGE-IYT 337
++GE++ WGEG GRLGH + + P LV+ +S NV VSCG T AL+K G +++
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWS 585
Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
+G ++G +G + + P K+ + L G+ + KV G + ++++GQ++ +G G
Sbjct: 586 FGGGDNGK--LGHGDTNRVYKP-KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA 642
Query: 398 FGVLGHGNLQNVS-QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
LG G+ + + +PK +E L ++ ++ G H C + + +++ W
Sbjct: 643 --CLGCGSSEATALRPKLIEELAATRIVDISIGDSH-----------CLALSHDNEVYAW 689
Query: 457 GDADKGRLGHVDGERKLL-PTCVTRLVDFDFVQASCGRMLTVGLTGL 502
G+ G+ G + + P V+ L Q S G ++ T L
Sbjct: 690 GNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTAL 736
Score = 255 (94.8 bits), Expect = 3.3e-13, Sum P(3) = 3.3e-13
Identities = 68/227 (29%), Positives = 118/227 (51%)
Query: 220 DVMIWGEGVLGGDIGGAVDG-SVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVT 278
++ WGEG D G G S S+N +P L++ + +V +S G+ H ++
Sbjct: 531 ELYTWGEG----DFGRLGHGDSNSRN-------IPTLVKD--ISNVGEVSCGSSHTIALS 577
Query: 279 KEGE-VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
K+G V+ +G G +G+LGH V PK++E L G+ ++ V G + ALT +G++Y
Sbjct: 578 KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYA 637
Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
WG GA L G S + L KL + L R+ ++ G+ H +S +++ +G+ +
Sbjct: 638 WGC---GACL-GCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNS 693
Query: 398 FGVLGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
G G GN +++PK+V L G+ ++ ++ G H+ A + DR
Sbjct: 694 MGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDR 740
Score = 203 (76.5 bits), Expect = 2.6e-08, Sum P(3) = 2.6e-08
Identities = 70/242 (28%), Positives = 114/242 (47%)
Query: 378 EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
+WH + ++ +G G G L +NV P S + + V CG T I
Sbjct: 3988 DWH---LGGKCDVYLWGAGRHGQLAEAG-RNVMVPAAAPSFS--QAQQVICGQNCTFVI- 4040
Query: 438 DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ--ASCGRM- 494
++N G + G+ GRLG + + + T ++ L F Q SCG
Sbjct: 4041 -------QAN---GTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDG 4090
Query: 495 LTVGLTGLGKVYTMGSAVHGQLGNPKA-KDRSITVVEGKLKEEFVKGISSGSYHVAVLTS 553
++ LT G+V++ G +G+LG+ + + R +E EE V+ +S G H AV+TS
Sbjct: 4091 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQ-MSCGFKHSAVVTS 4149
Query: 554 GGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSI--SV 611
G ++T+G G+LGLG++ ++ P V AL Q+ V CG + T A+ S+ +
Sbjct: 4150 DGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAF 4209
Query: 612 GD 613
GD
Sbjct: 4210 GD 4211
Score = 46 (21.3 bits), Expect = 1.7e-17, Sum P(3) = 1.7e-17
Identities = 12/50 (24%), Positives = 20/50 (40%)
Query: 314 INVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLF 363
+ + S + G+F TC L ++G N L E + P +F
Sbjct: 2124 LTLSSFTQGDFITCVLDMEARTISFGKNGEEPKLAFEDVDAAELYPCVMF 2173
Score = 42 (19.8 bits), Expect = 4.3e-17, Sum P(3) = 4.3e-17
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 316 VQSVSCG-EFQTCALTKSGEIYTWGHNNHGADL 347
+Q VS E C + ++G+I T G G L
Sbjct: 2028 IQEVSFDPEKAQCCIVENGQILTHGSGGKGYGL 2060
Score = 41 (19.5 bits), Expect = 3.3e-27, Sum P(2) = 3.3e-27
Identities = 15/52 (28%), Positives = 29/52 (55%)
Query: 980 SGQKGLKRVR-FSRRRFTEKAAERWWEENQVVVYQKYGIEEYSNLNQNQMRS 1030
SGQK LK+ R R E E+ +E + + ++G+ ++L++ Q+R+
Sbjct: 2249 SGQK-LKKSRSVQSREENEMREEKESKEEEKGKHNRHGL---ADLSEPQLRT 2296
Score = 41 (19.5 bits), Expect = 2.1e-25, Sum P(3) = 2.1e-25
Identities = 11/51 (21%), Positives = 25/51 (49%)
Query: 668 CYNH-LQKITHSGRL-LKQENQSPRNLLNLQGSLSEEVKEEKGALTPSRGQ 716
C N + + H ++ +K+ Q + ++Q E++EEK + +G+
Sbjct: 2230 CINKKMMERLHKIKICIKESGQKLKKSRSVQSREENEMREEKESKEEEKGK 2280
Score = 39 (18.8 bits), Expect = 8.7e-17, Sum P(3) = 8.7e-17
Identities = 16/48 (33%), Positives = 23/48 (47%)
Query: 309 ECLSGINVQSVSCGEFQT--CAL-TKSGEIYTWGHNNHGADLVGERRS 353
EC SG N + CG + AL TKS + + DL+G++ S
Sbjct: 3023 ECGSG-NPYYLLCGSCREKYLALKTKSKATSSERYKGQAPDLIGKQDS 3069
Score = 37 (18.1 bits), Expect = 1.3e-35, Sum P(2) = 1.3e-35
Identities = 7/18 (38%), Positives = 14/18 (77%)
Query: 1005 EENQVVVYQKYGIEEYSN 1022
E++Q+V + + +EE+SN
Sbjct: 4747 EQHQLVQWFWHTLEEFSN 4764
>UNIPROTKB|E2QYQ5 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR017986 InterPro:IPR000569
InterPro:IPR001680 InterPro:IPR003877 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00622 PROSITE:PS50082 PROSITE:PS50237
PROSITE:PS50294 SMART:SM00119 SMART:SM00320 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016567 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449
PROSITE:PS50188 SUPFAM:SSF56204 OMA:HHYQDGI
GeneTree:ENSGT00700000104312 EMBL:AAEX03016202
Ensembl:ENSCAFT00000026962 Uniprot:E2QYQ5
Length = 4863
Score = 451 (163.8 bits), Expect = 1.6e-35, Sum P(2) = 1.6e-35
Identities = 114/347 (32%), Positives = 176/347 (50%)
Query: 265 QNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSV--SCG 322
Q + G ++ G V GEG GRLG + D+ ++ L G V + SCG
Sbjct: 4031 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4090
Query: 323 -EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT 381
+ + ALT+SGE+++WG ++G +G S PR++ + L G V +++CG H+
Sbjct: 4091 SDGHSMALTESGEVFSWGDGDYGK--LGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS 4147
Query: 382 AIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMV 441
A+V++ G+LFT+G+G +G LG GN N P+ V +L G ++ VACG HT A+
Sbjct: 4148 AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV----- 4202
Query: 442 DRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTG 501
+A G ++ +GD D G+LG + K P V L + +CG +V LT
Sbjct: 4203 -----SADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTK 4257
Query: 502 LGKVYTMGSAVHGQLGNPKAKDRS------ITVVEGKLKEEFVKGISSGSYHVAVLTSGG 555
G VYT G +G P+ + R+ I V+ G + E+ ++ G+ H L S G
Sbjct: 4258 DGHVYTFGQ--DRLIGLPEGRARNHNRPQQIPVLAGVVIED----VAVGAEHTLALASTG 4311
Query: 556 SVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
VY WG N+ GQLGLG + PT V L+ + + + G +AA
Sbjct: 4312 DVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAA 4358
Score = 358 (131.1 bits), Expect = 6.3e-26, Sum P(2) = 6.3e-26
Identities = 102/359 (28%), Positives = 172/359 (47%)
Query: 268 SLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTC 327
S+ A +V++ EV+ WG +L + PK+ LS + Q++ G++ T
Sbjct: 359 SIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKMA--LSFSDAQTIEAGQYCTF 416
Query: 328 ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR-VSKVACGEWHTAIVST 386
++ G + G ++G +G+ ++S L + F+ ++ VS + HT +T
Sbjct: 417 VISTDGSVRACGKGSYGRLGLGDSNNQST-LKKLTFEPHRSIKKVSSSKGSDGHTLAFTT 475
Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCK 445
G++F++GDG +G LGHGN PK ++ L+G V V+ G H+AA+ +
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE------- 528
Query: 446 SNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK- 504
G+L+TWG+ D GRLGH D + +PT V + + + SCG T+ L+ G+
Sbjct: 529 ----DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRT 582
Query: 505 VYTMGSAVH-GQLGNPKA-KDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGK 562
V++ G + G+LG+ + VVE L+ F++ + +GS LTS G VY WG
Sbjct: 583 VWSFGGGDNVGKLGHGDTNRVYKPKVVEA-LQGMFIRKVCAGSQSSLALTSTGQVYAWGC 641
Query: 563 NANGQLGLGDSQERET-PTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQC 620
A LG G S+ P +E L ++ + G S + + +S QC
Sbjct: 642 GAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHVWLFVMDNEVYAWGNNSMGQC 698
Score = 345 (126.5 bits), Expect = 1.0e-22, Sum P(3) = 1.0e-22
Identities = 112/363 (30%), Positives = 168/363 (46%)
Query: 246 TQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG-HKVNMDVSC 304
TQ L PK+ S D Q I G +++ +G V G+G GRLG N +
Sbjct: 389 TQEKILQPKMALS--FSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTL 446
Query: 305 PKLV-ECLSGINVQSVSCG-EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL 362
KL E I S S G + T A T GE+++WG ++G +G S + P+ +
Sbjct: 447 KKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGK--LGHGNSSTQKYPKLI 504
Query: 363 FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLK 422
L G V V+ G H+A V+ G+L+T+G+G FG LGHG+ + + P V+ +
Sbjct: 505 QGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN-- 562
Query: 423 VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADK-GRLGHVDGERKLLPTCVTRL 481
V V+CG HT A+ + G ++++G D G+LGH D R P V L
Sbjct: 563 VGEVSCGSSHTIAL----------SKDGRTVWSFGGGDNVGKLGHGDTNRVYKPKVVEAL 612
Query: 482 VDFDFVQASC-GRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKG 540
F++ C G ++ LT G+VY G G+ +A ++E +L +
Sbjct: 613 QGM-FIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRPKLIE-ELAATRIVD 670
Query: 541 ISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGSSI 599
IS G HV + VY WG N+ GQ G G+S T P V L ++ + G+S
Sbjct: 671 ISIGDSHVWLFVMDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSH 730
Query: 600 TAA 602
+ A
Sbjct: 731 SLA 733
Score = 341 (125.1 bits), Expect = 1.1e-23, Sum P(2) = 1.1e-23
Identities = 95/327 (29%), Positives = 160/327 (48%)
Query: 282 EVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
+V+ WG G+ G+L + +V P S Q V CG+ T + +G + G
Sbjct: 3999 DVYLWGAGRHGQLA-EAGRNVMVPAAAPSFS--QAQQVICGQNCTFVIQANGTVLACGEG 4055
Query: 342 NHGADLVGERRSRS-HWLPRKLFDTLDGVRVSKV--ACG-EWHTAIVSTSGQLFTYGDGT 397
++G +G+ S H L + L G V+++ +CG + H+ ++ SG++F++GDG
Sbjct: 4056 SYGR--LGQGNSDDLHVLT--VISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGD 4111
Query: 398 FGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
+G LGHGN +P+++E+L+G +V ++CG H+A + GKLFT+G
Sbjct: 4112 YGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTS-----------DGKLFTFG 4160
Query: 458 DADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK-VYTMGSAVHGQL 516
+ D GRLG + K LP VT L + Q +CG T+ ++ G V+ G +G+L
Sbjct: 4161 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKL 4220
Query: 517 GNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQER 576
G + +S L +K ++ G+ LT G VYT+G++ L G ++
Sbjct: 4221 GLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4280
Query: 577 ETPTFVEALRDRQVESVVCGSSITAAI 603
P + L +E V G+ T A+
Sbjct: 4281 NRPQQIPVLAGVVIEDVAVGAEHTLAL 4307
Score = 331 (121.6 bits), Expect = 1.3e-22, Sum P(2) = 1.3e-22
Identities = 100/328 (30%), Positives = 161/328 (49%)
Query: 273 HAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKS 332
H+ +T+ GEVF WG+G G+LGH + P+ +E L G V +SCG + +T
Sbjct: 4094 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD 4153
Query: 333 GEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQL-F 391
G+++T+G+ ++G +G ++ LP ++ L+G ++ +VACG HT VS G + +
Sbjct: 4154 GKLFTFGNGDYGRLGLGNTSNKK--LPERV-TALEGYQIGQVACGLNHTLAVSADGSMVW 4210
Query: 392 TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
+GDG +G LG GN S P++V+ L G+ +K VACG + A+ G
Sbjct: 4211 AFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTK-----------DG 4259
Query: 452 KLFTWGDADKGRLGHVDGERKL--LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMG 509
++T+G D+ +G +G + P + L + G T+ L G VY G
Sbjct: 4260 HVYTFGQ-DR-LIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWG 4317
Query: 510 SAVHGQLG----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGG-SVYTWGKNA 564
S GQLG N + +TV++GK ++ IS+G H A T+ G +
Sbjct: 4318 SNSEGQLGLGHTNHVREPTLVTVLQGKN----IRQISAGRCHSAAWTAPPVPPRAPGVSV 4373
Query: 565 NGQLGLGDSQERETPTFVEALRDRQVES 592
QLGL D+ P ALR+ + +
Sbjct: 4374 PLQLGLPDA----VPPQYGALREVSIHT 4397
Score = 298 (110.0 bits), Expect = 4.3e-19, Sum P(2) = 4.3e-19
Identities = 90/306 (29%), Positives = 149/306 (48%)
Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
+V WG+G D G G+ + + P+ +E+ +V +S G KH+A+VT
Sbjct: 4103 EVFSWGDG----DYGKLGHGNSDRQRR------PRQIEALQGEEVVQMSCGFKHSAVVTS 4152
Query: 280 EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGE-IYTW 338
+G++F +G G GRLG + P+ V L G + V+CG T A++ G ++ +
Sbjct: 4153 DGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAF 4212
Query: 339 GHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTF 398
G ++G +G ++S P+K+ D L G+ + KVACG + ++ G ++T+G
Sbjct: 4213 GDGDYGKLGLGNSTAKSS--PQKV-DVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 4269
Query: 399 GVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
L G +N ++P+++ L G+ ++ VA G HT A+ A G ++ WG
Sbjct: 4270 IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLAL-----------ASTGDVYAWGS 4318
Query: 459 ADKGRLG--HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLG-KVYTMGSAVHGQ 515
+G+LG H + R+ PT VT L + Q S GR + T G +V Q
Sbjct: 4319 NSEGQLGLGHTNHVRE--PTLVTVLQGKNIRQISAGRCHSAAWTAPPVPPRAPGVSVPLQ 4376
Query: 516 LGNPKA 521
LG P A
Sbjct: 4377 LGLPDA 4382
Score = 291 (107.5 bits), Expect = 1.7e-17, Sum P(3) = 1.7e-17
Identities = 84/307 (27%), Positives = 149/307 (48%)
Query: 334 EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
++Y WG HG + E R+ +P + + +V CG+ T ++ +G +
Sbjct: 3999 DVYLWGAGRHGQ--LAEA-GRNVMVPAAA-PSFS--QAQQVICGQNCTFVIQANGTVLAC 4052
Query: 394 GDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSV--ACGP-WHTAAIVDIMVDRCKSNAIG 450
G+G++G LG GN ++ + +L+G V + +CG H+ A+ +
Sbjct: 4053 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----------S 4101
Query: 451 GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
G++F+WGD D G+LGH + +R+ P + L + VQ SCG + +T GK++T G+
Sbjct: 4102 GEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGN 4161
Query: 511 AVHGQLG-----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
+G+LG N K +R +T +EG + G++ + +AV G V+ +G
Sbjct: 4162 GDYGRLGLGNTSNKKLPER-VTALEGYQIGQVACGLN---HTLAVSADGSMVWAFGDGDY 4217
Query: 566 GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFG 625
G+LGLG+S + +P V+ L ++ V CG+ + A+ + Q +P G
Sbjct: 4218 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL--IGLPEG 4275
Query: 626 FRRKKHN 632
R + HN
Sbjct: 4276 -RARNHN 4281
Score = 257 (95.5 bits), Expect = 2.0e-13, Sum P(3) = 2.0e-13
Identities = 81/287 (28%), Positives = 139/287 (48%)
Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQN-ISLGAKHAALVT 278
+V WG+G D G G+ S K PKL++ + V +S G +H+A VT
Sbjct: 478 EVFSWGDG----DYGKLGHGNSSTQK------YPKLIQGPLQGKVVVCVSAGYRHSAAVT 527
Query: 279 KEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGE-IYT 337
++GE++ WGEG GRLGH + + P LV+ +S NV VSCG T AL+K G +++
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWS 585
Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
+G ++ L G + + P K+ + L G+ + KV G + ++++GQ++ +G G
Sbjct: 586 FGGGDNVGKL-GHGDTNRVYKP-KVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA 643
Query: 398 FGVLGHGNLQNVS-QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
LG G+ + + +PK +E L ++ ++ G H V + +++ W
Sbjct: 644 --CLGCGSSEATALRPKLIEELAATRIVDISIGDSHVWLFV-----------MDNEVYAW 690
Query: 457 GDADKGRLGHVDGERKLL-PTCVTRLVDFDFVQASCGRMLTVGLTGL 502
G+ G+ G + + P V+ L Q S G ++ T L
Sbjct: 691 GNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTAL 737
Score = 242 (90.2 bits), Expect = 7.5e-12, Sum P(3) = 7.5e-12
Identities = 68/228 (29%), Positives = 117/228 (51%)
Query: 220 DVMIWGEGVLGGDIGGAVDG-SVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVT 278
++ WGEG D G G S S+N +P L++ + +V +S G+ H ++
Sbjct: 531 ELYTWGEG----DFGRLGHGDSNSRN-------IPTLVKD--ISNVGEVSCGSSHTIALS 577
Query: 279 KEGE-VFCWGEGKD-GRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIY 336
K+G V+ +G G + G+LGH V PK+VE L G+ ++ V G + ALT +G++Y
Sbjct: 578 KDGRTVWSFGGGDNVGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVY 637
Query: 337 TWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG 396
WG GA L G S + L KL + L R+ ++ G+ H + +++ +G+
Sbjct: 638 AWGC---GACL-GCGSSEATALRPKLIEELAATRIVDISIGDSHVWLFVMDNEVYAWGNN 693
Query: 397 TFGVLGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
+ G G GN +++PK+V L G+ ++ ++ G H+ A + DR
Sbjct: 694 SMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDR 741
Score = 203 (76.5 bits), Expect = 2.6e-08, Sum P(3) = 2.6e-08
Identities = 70/242 (28%), Positives = 114/242 (47%)
Query: 378 EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
+WH + ++ +G G G L +NV P S + + V CG T I
Sbjct: 3991 DWH---LGGKCDVYLWGAGRHGQLAEAG-RNVMVPAAAPSFS--QAQQVICGQNCTFVI- 4043
Query: 438 DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ--ASCGRM- 494
++N G + G+ GRLG + + + T ++ L F Q SCG
Sbjct: 4044 -------QAN---GTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDG 4093
Query: 495 LTVGLTGLGKVYTMGSAVHGQLGNPKA-KDRSITVVEGKLKEEFVKGISSGSYHVAVLTS 553
++ LT G+V++ G +G+LG+ + + R +E EE V+ +S G H AV+TS
Sbjct: 4094 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQ-MSCGFKHSAVVTS 4152
Query: 554 GGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSI--SV 611
G ++T+G G+LGLG++ ++ P V AL Q+ V CG + T A+ S+ +
Sbjct: 4153 DGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAF 4212
Query: 612 GD 613
GD
Sbjct: 4213 GD 4214
Score = 46 (21.3 bits), Expect = 1.7e-17, Sum P(3) = 1.7e-17
Identities = 12/50 (24%), Positives = 20/50 (40%)
Query: 314 INVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLF 363
+ + S + G+F TC L ++G N L E + P +F
Sbjct: 2127 LTLSSFTQGDFITCVLDMEARTISFGKNGEEPKLAFEDVDAAELYPCVMF 2176
Score = 44 (20.5 bits), Expect = 2.7e-17, Sum P(3) = 2.7e-17
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 316 VQSVSCG-EFQTCALTKSGEIYTWGHNNHGADL 347
+Q VS E C L ++G+I T G G L
Sbjct: 2031 IQEVSFDPEKAQCCLVENGQILTHGSGGKGYGL 2063
Score = 41 (19.5 bits), Expect = 6.3e-26, Sum P(2) = 6.3e-26
Identities = 15/52 (28%), Positives = 29/52 (55%)
Query: 980 SGQKGLKRVR-FSRRRFTEKAAERWWEENQVVVYQKYGIEEYSNLNQNQMRS 1030
SGQK LK+ R R E E+ +E + + ++G+ ++L++ Q+R+
Sbjct: 2252 SGQK-LKKSRSVQSREENEMREEKESKEEEKGKHNRHGL---ADLSEPQLRT 2299
Score = 41 (19.5 bits), Expect = 4.1e-24, Sum P(3) = 4.1e-24
Identities = 11/51 (21%), Positives = 25/51 (49%)
Query: 668 CYNH-LQKITHSGRL-LKQENQSPRNLLNLQGSLSEEVKEEKGALTPSRGQ 716
C N + + H ++ +K+ Q + ++Q E++EEK + +G+
Sbjct: 2233 CINKKMMERLHKIKICIKESGQKLKKSRSVQSREENEMREEKESKEEEKGK 2283
Score = 39 (18.8 bits), Expect = 8.7e-17, Sum P(3) = 8.7e-17
Identities = 16/48 (33%), Positives = 23/48 (47%)
Query: 309 ECLSGINVQSVSCGEFQT--CAL-TKSGEIYTWGHNNHGADLVGERRS 353
EC SG N + CG + AL TKS + + DL+G++ S
Sbjct: 3026 ECGSG-NPYYLLCGSCREKYLALKTKSKTTSSERYKGQAPDLIGKQDS 3072
Score = 37 (18.1 bits), Expect = 1.6e-35, Sum P(2) = 1.6e-35
Identities = 7/18 (38%), Positives = 14/18 (77%)
Query: 1005 EENQVVVYQKYGIEEYSN 1022
E++Q+V + + +EE+SN
Sbjct: 4751 EQHQLVQWFWHTLEEFSN 4768
>TAIR|locus:2159295 [details] [associations]
symbol:RUG3 "RCC1/UVR8/GEF-like 3" species:3702
"Arabidopsis thaliana" [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0008536 "Ran GTPase binding" evidence=ISS] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0008380 "RNA splicing"
evidence=IMP] [GO:0032981 "mitochondrial respiratory chain complex
I assembly" evidence=IMP] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 EMBL:CP002688 GO:GO:0008380 EMBL:AB015472
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0032981
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 UniGene:At.29139
UniGene:At.50545 HSSP:P18754 IPI:IPI00532631 RefSeq:NP_200895.2
ProteinModelPortal:Q9FJG9 SMR:Q9FJG9 PRIDE:Q9FJG9
EnsemblPlants:AT5G60870.1 GeneID:836208 KEGG:ath:AT5G60870
TAIR:At5g60870 HOGENOM:HOG000030010 InParanoid:Q9FJG9 OMA:ISCGLFH
PhylomeDB:Q9FJG9 ProtClustDB:CLSN2681113 Genevestigator:Q9FJG9
Uniprot:Q9FJG9
Length = 445
Score = 386 (140.9 bits), Expect = 1.3e-34, P = 1.3e-34
Identities = 126/427 (29%), Positives = 205/427 (48%)
Query: 207 YGSPLIERKDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPK------LLESAV 260
Y SP I+ + + WG G G +GG ++ + + V LL + L ++
Sbjct: 36 YTSPDIDSDPVTLQLFSWGRGA-SGQLGGGIE-EIRMYPSPVANLLFRSDQSFSLAQTPG 93
Query: 261 MLDVQN------ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGI 314
+D + IS G H+ L T +G+++ WG+G GRLG V P L
Sbjct: 94 RIDADSSSFRIGISCGLFHSGL-TIDGDLWIWGKGDGGRLGFGQENSVFVPNLNPLFEEH 152
Query: 315 NVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKV 374
+++ ++ G + ALT G+++TWG+ GA +G + +PR++ D+ D ++S +
Sbjct: 153 SIRCIALGGLHSVALTHQGDVFTWGYGGFGA--LGHKVYTRELVPRRVDDSWD-CKISAI 209
Query: 375 ACGEWHTAIVSTSGQLFTYG----DGTFGVLGHGNLQN----VSQPKEVESLRGLKVKSV 426
A HTA ++ SG+L+ +G DG G LG G N +S P +V++L + V SV
Sbjct: 210 ATSGTHTAAITESGELYMWGREEGDGRLG-LGPGRGPNEGGGLSVPSKVKALT-VPVASV 267
Query: 427 ACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF 486
+CG + T A+ K G+L+ WG LG D P V L
Sbjct: 268 SCGGFFTMALT-------KE----GQLWNWGANSNYELGRGDNLGGWEPMPVPSLEGVRI 316
Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSI-TVVEGKLKEEFVKGISSGS 545
Q +CG ++ LT GKV + G HGQLG+ +++ + T +E L ++ + I+SG
Sbjct: 317 TQIACGGYHSLALTEEGKVLSWGHGGHGQLGSSSLRNQKVPTEIEA-LADKKIVFIASGG 375
Query: 546 YHVAVLTSGGSVYTWGKNANGQLGL-GDSQERETPTFVEALRDR------QVESVVCGSS 598
A +T GG ++ WG + QLG+ G + + TP V L + +V S+ G+S
Sbjct: 376 SSSAAITDGGELWMWGNAKDFQLGVPGLPEIQTTPVEVNFLTEEDECQPHKVISISIGAS 435
Query: 599 ITAAICL 605
A+CL
Sbjct: 436 --HALCL 440
Score = 200 (75.5 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 51/186 (27%), Positives = 93/186 (50%)
Query: 259 AVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQS 318
A+ + V ++S G +TKEG+++ WG + LG N+ P V L G+ +
Sbjct: 259 ALTVPVASVSCGGFFTMALTKEGQLWNWGANSNYELGRGDNLGGWEPMPVPSLEGVRITQ 318
Query: 319 VSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGE 378
++CG + + ALT+ G++ +WGH HG +G R+ +P ++ + L ++ +A G
Sbjct: 319 IACGGYHSLALTEEGKVLSWGHGGHGQ--LGSSSLRNQKVPTEI-EALADKKIVFIASGG 375
Query: 379 WHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV-SQPKEVESL------RGLKVKSVACGPW 431
+A ++ G+L+ +G+ LG L + + P EV L + KV S++ G
Sbjct: 376 SSSAAITDGGELWMWGNAKDFQLGVPGLPEIQTTPVEVNFLTEEDECQPHKVISISIGAS 435
Query: 432 HTAAIV 437
H +V
Sbjct: 436 HALCLV 441
>RGD|1310971 [details] [associations]
symbol:Herc4 "HECT and RLD domain containing E3 ubiquitin
protein ligase 4" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;IBA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=IBA]
[GO:0005737 "cytoplasm" evidence=IBA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA;ISO;ISS]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=IBA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 UniPathway:UPA00143 RGD:1310971
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829 GO:GO:0005634
GO:GO:0005737 GO:GO:0030154 GO:GO:0007283 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
SUPFAM:SSF56204 eggNOG:COG5021 GeneTree:ENSGT00660000095216
HOGENOM:HOG000208452 HOVERGEN:HBG050878 HSSP:Q9UEP9 CTD:26091
KO:K10615 OMA:KLVIQPT OrthoDB:EOG44XJG1 EMBL:BC087104
IPI:IPI00360837 RefSeq:NP_001012074.1 UniGene:Rn.18143
ProteinModelPortal:Q5PQN1 PhosphoSite:Q5PQN1 PRIDE:Q5PQN1
Ensembl:ENSRNOT00000051367 GeneID:309758 KEGG:rno:309758
UCSC:RGD:1310971 InParanoid:Q5PQN1 NextBio:661276
ArrayExpress:Q5PQN1 Genevestigator:Q5PQN1 Uniprot:Q5PQN1
Length = 1057
Score = 391 (142.7 bits), Expect = 2.0e-32, P = 2.0e-32
Identities = 117/406 (28%), Positives = 185/406 (45%)
Query: 234 GGAVDGSVSQNKTQVDALL-PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDG 292
G A G + + +L P+ + V V+++ G +H V +G V+ G G
Sbjct: 5 GNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64
Query: 293 RLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGA-DLVGER 351
+LGH+ + P+ V L N+ +VSCGE T AL G++Y WG ++ G L G
Sbjct: 65 QLGHEKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSE 122
Query: 352 RSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHG-NLQNVS 410
+PR + +L +++ +VACG +H+ +S + ++F +G +G LG G Q +
Sbjct: 123 ECIR--VPRNI-KSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQT 179
Query: 411 QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGE 470
P+ ++SL G+ VA G H+ + + G +F WG G+LG D
Sbjct: 180 SPQLIKSLLGIPFMQVAAGGAHSFVLT-----------LSGAIFGWGRNKFGQLGLNDEN 228
Query: 471 RKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVE 530
+ +P + L V CG T LT G V+T G+ +GQLG+
Sbjct: 229 DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Query: 531 GKLKEEFVKGISSGSYHV-AVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQ 589
+L V I+ G H A + S G +Y++G NGQLG G + R++P V+ +
Sbjct: 289 FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG--NWF 346
Query: 590 VESVVCGSSITAA--ICLHKSISVGDQS-----SCSQCRMPFGFRR 628
+ C I + C+ + S GDQS S C P FRR
Sbjct: 347 SYNGQCPQDIGSEDYFCVKRIFSGGDQSFSHYSSPQSCGPPDDFRR 392
Score = 333 (122.3 bits), Expect = 3.7e-26, P = 3.7e-26
Identities = 92/324 (28%), Positives = 153/324 (47%)
Query: 283 VFCWGEGKDGRLG-HKVNMDVSC-PKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
+ CWG G+LG ++ ++ P+ + V+ V CG T + G +YT G
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
N+ G +G +SR P ++ LD + V+CGE HT ++ GQ++ +G + G
Sbjct: 61 NDLGQ--LGHEKSRKK--PEQVV-ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115
Query: 401 LG-HGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
LG G+ + + P+ ++SL +++ VACG +H+ A+ S A ++F WG
Sbjct: 116 LGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLAL---------SKA--SEVFCWGQN 164
Query: 460 DKGRLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
G+LG ++ +++ P + L+ F+Q + G + LT G ++ G GQLG
Sbjct: 165 KYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET 578
DR + + L+ + + I G H A LT G V+T+G GQLG +
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN 284
Query: 579 PTFVEALRDRQVESVVCGSSITAA 602
P V L V + CG T+A
Sbjct: 285 PRKVFELMGSIVTQIACGRQHTSA 308
Score = 308 (113.5 bits), Expect = 1.9e-23, P = 1.9e-23
Identities = 83/270 (30%), Positives = 135/270 (50%)
Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
WG+ ++G +G PRK D +V V CG HT V G ++T G
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKS-DFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCND 62
Query: 398 FGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
G LGH + +P++V +L + +V+CG HT A+ D G+++ WG
Sbjct: 63 LGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALND-----------KGQVYAWG 109
Query: 458 -DADKGRLGHVDGERKL-LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQ 515
D+D G+LG E + +P + L D VQ +CG ++ L+ +V+ G +GQ
Sbjct: 110 LDSD-GQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQ 168
Query: 516 LGN--PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDS 573
LG K S +++ L F++ +++G H VLT G+++ WG+N GQLGL D
Sbjct: 169 LGLGIECQKQTSPQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE 227
Query: 574 QERETPTFVEALRDRQVESVVCGSSITAAI 603
+R P +++LR +++ + CG TAA+
Sbjct: 228 NDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257
Score = 264 (98.0 bits), Expect = 1.0e-18, P = 1.0e-18
Identities = 64/199 (32%), Positives = 107/199 (53%)
Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
+V WG+ G +G ++ Q +T P+L++S + + ++ G H+ ++T
Sbjct: 157 EVFCWGQNKYG-QLGLGIE---CQKQTS-----PQLIKSLLGIPFMQVAAGGAHSFVLTL 207
Query: 280 EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
G +F WG K G+LG D P L++ L + + CGE T ALTK G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267
Query: 340 HNNHGADLVGERRSRSHWL-PRKLFDTLDGVRVSKVACGEWHT-AIVSTSGQLFTYGDGT 397
+G +G S SH + PRK+F+ + + V+++ACG HT A V +SG+++++G G
Sbjct: 268 AGGYGQ--LGHN-STSHEINPRKVFELMGSI-VTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 398 FGVLGHGNLQNVSQPKEVE 416
G LG G+ N P V+
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>DICTYBASE|DDB_G0269934 [details] [associations]
symbol:DDB_G0269934 "Ras GTPase activation
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0051056 "regulation of small GTPase mediated signal
transduction" evidence=IEA] [GO:0043547 "positive regulation of
GTPase activity" evidence=IEA] [GO:0035023 "regulation of Rho
protein signal transduction" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005096 "GTPase activator activity" evidence=IEA]
[GO:0005089 "Rho guanyl-nucleotide exchange factor activity"
evidence=IEA] InterPro:IPR000219 InterPro:IPR001936
InterPro:IPR008936 Pfam:PF00616 Pfam:PF00621 PROSITE:PS50010
PROSITE:PS50018 SMART:SM00323 dictyBase:DDB_G0269934
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0007165 EMBL:AAFI02000005
GO:GO:0005096 GO:GO:0043547 SUPFAM:SSF48350 GO:GO:0005622
GO:GO:0005089 Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 Gene3D:1.10.506.10 eggNOG:COG5261
RefSeq:XP_646416.1 ProteinModelPortal:Q55CR5
EnsemblProtists:DDB0233497 GeneID:8617373 KEGG:ddi:DDB_G0269934
InParanoid:Q55CR5 OMA:SHTEYEN Uniprot:Q55CR5
Length = 2044
Score = 293 (108.2 bits), Expect = 5.7e-32, Sum P(4) = 5.7e-32
Identities = 73/220 (33%), Positives = 120/220 (54%)
Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
DV +WG G + + + Q + D LLP LES + DV ++S+G H A V
Sbjct: 769 DVYLWGRGAVKTPAVPIL--GIPQIE---DQLLPFKLES--LSDVVSVSIGFCHGAAVRA 821
Query: 280 EGEVFCWGEGKDGRLGH-KVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTW 338
GE+ WG G++G+LGH N + PK+++ L+ + V CGE T LTK+G++Y+W
Sbjct: 822 NGELLTWGVGENGQLGHGDTNNQIE-PKIIQSLTSFWITQVQCGEKHTICLTKNGKVYSW 880
Query: 339 GHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTF 398
G + +G +G+ H P ++ L+ V ++A G H A+++TS ++ +G+G
Sbjct: 881 GASEYGQLGLGD--VTQHSSPMQV-SALEKYNVLQIASGSTHCAVLTTSKEVLVFGNGA- 936
Query: 399 GVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVD 438
+G ++ VS P V SL+ L + + CG + TAAI +
Sbjct: 937 -AMGAASV--VSLPTLVPSLKYLHIDRLCCGHYSTAAITE 973
Score = 290 (107.1 bits), Expect = 6.9e-20, Sum P(3) = 6.9e-20
Identities = 93/307 (30%), Positives = 137/307 (44%)
Query: 276 LVTKEGEVFCWGEGKDGRLGHKVNM-DVSCPKLVECLSGINVQ---SVSCGEFQTCALTK 331
L T G + WG + +LG KV D S P E L N+ S+S G + + LT+
Sbjct: 709 LDTSRG-LMTWGSASNCKLGFKVTAKDQSQPT-PERLPNFNIPDICSISSGSYYSSVLTE 766
Query: 332 SGEIYTWGHN---NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSG 388
+G++Y WG ++G + LP KL D V VS C H A V +G
Sbjct: 767 NGDVYLWGRGAVKTPAVPILGIPQIEDQLLPFKLESLSDVVSVSIGFC---HGAAVRANG 823
Query: 389 QLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNA 448
+L T+G G G LGHG+ N +PK ++SL + V CG HT +
Sbjct: 824 ELLTWGVGENGQLGHGDTNNQIEPKIIQSLTSFWITQVQCGEKHTICLTK---------- 873
Query: 449 IGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTM 508
GK+++WG ++ G+LG D + P V+ L ++ +Q + G LT +V
Sbjct: 874 -NGKVYSWGASEYGQLGLGDVTQHSSPMQVSALEKYNVLQIASGSTHCAVLTTSKEVLVF 932
Query: 509 GSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
G+ +G A S+ + LK + + G Y A +T G VYTWG
Sbjct: 933 GNGA--AMG--AASVVSLPTLVPSLKYLHIDRLCCGHYSTAAITECGDVYTWGTGQELGH 988
Query: 569 GLGDSQE 575
G G+S E
Sbjct: 989 G-GNSTE 994
Score = 269 (99.8 bits), Expect = 1.2e-17, Sum P(3) = 1.2e-17
Identities = 83/283 (29%), Positives = 137/283 (48%)
Query: 329 LTKSGEIYTWGH-NNHGADLVGERRSRSHWLPRKL--FDTLDGVRVSKVACGEWHTAIVS 385
L S + TWG +N + +S P +L F+ D + ++ G +++++++
Sbjct: 709 LDTSRGLMTWGSASNCKLGFKVTAKDQSQPTPERLPNFNIPD---ICSISSGSYYSSVLT 765
Query: 386 TSGQLFTYGDGTFG-----VLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIM 440
+G ++ +G G +LG +++ P ++ESL V SV+ G H AA+
Sbjct: 766 ENGDVYLWGRGAVKTPAVPILGIPQIEDQLLPFKLESLSD--VVSVSIGFCHGAAV---- 819
Query: 441 VDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLT 500
++N G+L TWG + G+LGH D ++ P + L F Q CG T+ LT
Sbjct: 820 ----RAN---GELLTWGVGENGQLGHGDTNNQIEPKIIQSLTSFWITQVQCGEKHTICLT 872
Query: 501 GLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
GKVY+ G++ +GQLG S + L++ V I+SGS H AVLT+ V +
Sbjct: 873 KNGKVYSWGASEYGQLGLGDVTQHSSPMQVSALEKYNVLQIASGSTHCAVLTTSKEVLVF 932
Query: 561 GKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
G A +G + PT V +L+ ++ + CG TAAI
Sbjct: 933 GNGA----AMGAASVVSLPTLVPSLKYLHIDRLCCGHYSTAAI 971
Score = 244 (91.0 bits), Expect = 5.3e-15, Sum P(3) = 5.3e-15
Identities = 68/218 (31%), Positives = 111/218 (50%)
Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
V WG G +G G V+Q+ + P + + +V I+ G+ H A++T
Sbjct: 877 VYSWGASEYG-QLGL---GDVTQHSS------PMQVSALEKYNVLQIASGSTHCAVLTTS 926
Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
EV +G G +G VS P LV L +++ + CG + T A+T+ G++YTWG
Sbjct: 927 KEVLVFGNG--AAMG--AASVVSLPTLVPSLKYLHIDRLCCGHYSTAAITECGDVYTWGT 982
Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
G +L G + + P KL + L + +++CG HTA ++ SG++FT G +FG
Sbjct: 983 ---GQEL-GHGGNSTETSP-KLIEALRNQSIRQISCGGRHTAFLTDSGRIFTCGKDSFGQ 1037
Query: 401 LGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVD 438
LG + + ++PK +ESL SV+CG + A+ D
Sbjct: 1038 LGQMS-GDQNKPKRIESLTKTTFISVSCGENYNVALFD 1074
Score = 178 (67.7 bits), Expect = 4.2e-08, Sum P(3) = 4.2e-08
Identities = 43/137 (31%), Positives = 74/137 (54%)
Query: 252 LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECL 311
LP L+ S L + + G A +T+ G+V+ WG G++ LGH N + PKL+E L
Sbjct: 946 LPTLVPSLKYLHIDRLCCGHYSTAAITECGDVYTWGTGQE--LGHGGNSTETSPKLIEAL 1003
Query: 312 SGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRV 371
+++ +SCG T LT SG I+T G ++ G +G+ + P+++ ++L
Sbjct: 1004 RNQSIRQISCGGRHTAFLTDSGRIFTCGKDSFGQ--LGQMSGDQN-KPKRI-ESLTKTTF 1059
Query: 372 SKVACGE-WHTAIVSTS 387
V+CGE ++ A+ T+
Sbjct: 1060 ISVSCGENYNVALFDTT 1076
Score = 170 (64.9 bits), Expect = 2.8e-07, Sum P(3) = 2.8e-07
Identities = 64/237 (27%), Positives = 101/237 (42%)
Query: 384 VSTSGQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVK---SVACGPWHTAAIVDI 439
+ TS L T+G + LG ++ SQP E L + S++ G ++++ + +
Sbjct: 709 LDTSRGLMTWGSASNCKLGFKVTAKDQSQPTP-ERLPNFNIPDICSISSGSYYSSVLTE- 766
Query: 440 MVDRCKSNAIGGKLFTWG-DADKGR----LGHVDGERKLLPTCVTRLVDFDFVQASCGRM 494
G ++ WG A K LG E +LLP + L D V S G
Sbjct: 767 ----------NGDVYLWGRGAVKTPAVPILGIPQIEDQLLPFKLESLSDV--VSVSIGFC 814
Query: 495 LTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSG 554
+ G++ T G +GQLG+ ++ + L ++ + G H LT
Sbjct: 815 HGAAVRANGELLTWGVGENGQLGHGDTNNQIEPKIIQSLTSFWITQVQCGEKHTICLTKN 874
Query: 555 GSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISV 611
G VY+WG + GQLGLGD + +P V AL V + GS+ A + K + V
Sbjct: 875 GKVYSWGASEYGQLGLGDVTQHSSPMQVSALEKYNVLQIASGSTHCAVLTTSKEVLV 931
Score = 162 (62.1 bits), Expect = 5.7e-32, Sum P(4) = 5.7e-32
Identities = 44/131 (33%), Positives = 65/131 (49%)
Query: 474 LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVH-GQLGNPKAKDRSITVVEGK 532
LPT V L + CG T +T G VYT G+ G GN + + S ++E
Sbjct: 946 LPTLVPSLKYLHIDRLCCGHYSTAAITECGDVYTWGTGQELGHGGN--STETSPKLIEA- 1002
Query: 533 LKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVES 592
L+ + ++ IS G H A LT G ++T GK++ GQLG S ++ P +E+L S
Sbjct: 1003 LRNQSIRQISCGGRHTAFLTDSGRIFTCGKDSFGQLGQM-SGDQNKPKRIESLTKTTFIS 1061
Query: 593 VVCGSSITAAI 603
V CG + A+
Sbjct: 1062 VSCGENYNVAL 1072
Score = 147 (56.8 bits), Expect = 2.0e-30, Sum P(4) = 2.0e-30
Identities = 45/143 (31%), Positives = 65/143 (45%)
Query: 409 VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD 468
VS P V SL+ L + + CG + TAAI + C G ++TWG + LGH
Sbjct: 944 VSLPTLVPSLKYLHIDRLCCGHYSTAAITE-----C------GDVYTWGTGQE--LGHGG 990
Query: 469 GERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITV 528
+ P + L + Q SCG T LT G+++T G GQLG
Sbjct: 991 NSTETSPKLIEALRNQSIRQISCGGRHTAFLTDSGRIFTCGKDSFGQLGQMSGDQNKPKR 1050
Query: 529 VEGKLKEEFVKGISSG-SYHVAV 550
+E K F+ +S G +Y+VA+
Sbjct: 1051 IESLTKTTFIS-VSCGENYNVAL 1072
Score = 58 (25.5 bits), Expect = 5.7e-32, Sum P(4) = 5.7e-32
Identities = 15/53 (28%), Positives = 25/53 (47%)
Query: 772 KTQMSTHSPLLRKISLGSNFIPIASTVEKDLSESNKMLNEEVQRLRDQARNLE 824
+T S PL NF+P+ + + K + ES+ V +L A+NL+
Sbjct: 1406 RTHTSFAQPLSTVADELENFLPLITEMRKRVFESHTEYENAVSKLYSLAKNLQ 1458
Score = 39 (18.8 bits), Expect = 5.1e-30, Sum P(4) = 5.1e-30
Identities = 17/41 (41%), Positives = 22/41 (53%)
Query: 705 EEKGALTPSRGQSFTSKQSRNVERKPGECLESASSLSSGLQ 745
+EKGA TPS TS +S + ++S SS SS LQ
Sbjct: 1557 QEKGAPTPS----LTSIKSTPI-------IQSQSSASSTLQ 1586
Score = 37 (18.1 bits), Expect = 5.7e-32, Sum P(4) = 5.7e-32
Identities = 8/27 (29%), Positives = 16/27 (59%)
Query: 912 SLCSSPIVFSNKLKSVYGRELCHDNSS 938
S SP+V + +L SV ++ ++S+
Sbjct: 1601 SSAPSPLVLATQLNSVNNTDMSANSST 1627
>UNIPROTKB|Q5GLZ8 [details] [associations]
symbol:HERC4 "Probable E3 ubiquitin-protein ligase HERC4"
species:9606 "Homo sapiens" [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] [GO:0005634
"nucleus" evidence=IBA] [GO:0005737 "cytoplasm" evidence=IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0007283
"spermatogenesis" evidence=ISS] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 UniPathway:UPA00143
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829 GO:GO:0005634
GO:GO:0005737 GO:GO:0030154 GO:GO:0007283 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
SUPFAM:SSF56204 eggNOG:COG5021 HOGENOM:HOG000208452
HOVERGEN:HBG050878 EMBL:AY221963 EMBL:AY650032 EMBL:AY650033
EMBL:AY650034 EMBL:AB046813 EMBL:AL356741 EMBL:AC024258
EMBL:AL133551 EMBL:BC039600 IPI:IPI00333067 IPI:IPI00552050
IPI:IPI00604497 IPI:IPI00827523 IPI:IPI00827948 IPI:IPI00827992
RefSeq:NP_056416.2 RefSeq:NP_071362.1 UniGene:Hs.51891 HSSP:Q9UEP9
ProteinModelPortal:Q5GLZ8 SMR:Q5GLZ8 IntAct:Q5GLZ8 STRING:Q5GLZ8
PhosphoSite:Q5GLZ8 DMDM:74707832 PaxDb:Q5GLZ8 PRIDE:Q5GLZ8
DNASU:26091 Ensembl:ENST00000277817 Ensembl:ENST00000373700
Ensembl:ENST00000395187 Ensembl:ENST00000395198
Ensembl:ENST00000412272 Ensembl:ENST00000473533
Ensembl:ENST00000492996 GeneID:26091 KEGG:hsa:26091 UCSC:uc001jng.4
UCSC:uc001jnh.4 UCSC:uc001jnk.3 UCSC:uc009xpr.3 CTD:26091
GeneCards:GC10M069681 HGNC:HGNC:24521 HPA:HPA045453 MIM:609248
neXtProt:NX_Q5GLZ8 PharmGKB:PA134949021 InParanoid:Q5GLZ8 KO:K10615
ChiTaRS:HERC4 GenomeRNAi:26091 NextBio:48027 ArrayExpress:Q5GLZ8
Bgee:Q5GLZ8 CleanEx:HS_HERC4 Genevestigator:Q5GLZ8 Uniprot:Q5GLZ8
Length = 1057
Score = 385 (140.6 bits), Expect = 8.8e-32, P = 8.8e-32
Identities = 115/405 (28%), Positives = 186/405 (45%)
Query: 234 GGAVDGSVSQNKTQVDALL-PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDG 292
G A G + + +L P+ + + V+++ G +H V +G V+ G G
Sbjct: 5 GNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64
Query: 293 RLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGA-DLVGER 351
+LGH+ + P+ V L N+ +VSCGE T AL G++Y WG ++ G LVG
Sbjct: 65 QLGHEKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSE 122
Query: 352 RSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHG-NLQNVS 410
+PR + +L +++ +VACG +H+ +S + ++F +G +G LG G + + +
Sbjct: 123 ECIR--VPRNI-KSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQT 179
Query: 411 QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGE 470
P+ ++SL G+ VA G H+ + + G +F WG G+LG D
Sbjct: 180 SPQLLKSLLGIPFMQVAAGGAHSFVLT-----------LSGAIFGWGRNKFGQLGLNDEN 228
Query: 471 RKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVE 530
+ +P + L V CG T LT G V+T G+ +GQLG+
Sbjct: 229 DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Query: 531 GKLKEEFVKGISSGSYHV-AVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQ 589
+L V I+ G H A + S G +Y++G NGQLG G + R++P V+ +
Sbjct: 289 FELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG--NWY 346
Query: 590 VESVVCGSSITAA--ICLHKSISVGDQS-----SCSQCRMPFGFR 627
+ C I + C+ + S GDQS S C P FR
Sbjct: 347 PYNGQCLPDIDSEEYFCVKRIFSGGDQSFSHYSSPQNCGPPDDFR 391
Score = 328 (120.5 bits), Expect = 3.9e-25, Sum P(2) = 3.9e-25
Identities = 93/324 (28%), Positives = 152/324 (46%)
Query: 283 VFCWGEGKDGRLG-HKVNMDVSC-PKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
+ CWG G+LG ++ ++ P+ + V+ V CG T + G +YT G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
N+ G +G +SR P ++ LD + V+CGE HT ++ GQ++ +G + G
Sbjct: 61 NDLGQ--LGHEKSRKK--PEQVV-ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115
Query: 401 LGH-GNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
LG G+ + + P+ ++SL +++ VACG +H+ A+ S A ++F WG
Sbjct: 116 LGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLAL---------SKA--SEVFCWGQN 164
Query: 460 DKGRLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
G+LG D +++ P + L+ F+Q + G + LT G ++ G GQLG
Sbjct: 165 KYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET 578
DR + + L+ + + I G H A LT G V+T+G GQLG +
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN 284
Query: 579 PTFVEALRDRQVESVVCGSSITAA 602
P V L V + CG T+A
Sbjct: 285 PRKVFELMGSIVTEIACGRQHTSA 308
Score = 315 (115.9 bits), Expect = 1.0e-23, Sum P(2) = 1.0e-23
Identities = 85/270 (31%), Positives = 135/270 (50%)
Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
WG+ + G +G PRK D RV V CG HT V G ++T G
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKS-DFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCND 62
Query: 398 FGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
G LGH + +P++V +L + +V+CG HT A+ D G+++ WG
Sbjct: 63 LGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALND-----------KGQVYAWG 109
Query: 458 -DADKGRLGHVDGERKL-LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQ 515
D+D G+LG V E + +P + L D VQ +CG ++ L+ +V+ G +GQ
Sbjct: 110 LDSD-GQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQ 168
Query: 516 LG--NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDS 573
LG K S +++ L F++ +++G H VLT G+++ WG+N GQLGL D
Sbjct: 169 LGLGTDCKKQTSPQLLKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE 227
Query: 574 QERETPTFVEALRDRQVESVVCGSSITAAI 603
+R P +++LR +++ + CG TAA+
Sbjct: 228 NDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257
Score = 263 (97.6 bits), Expect = 1.3e-18, P = 1.3e-18
Identities = 66/199 (33%), Positives = 105/199 (52%)
Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
+V WG+ G +G D K Q P+LL+S + + ++ G H+ ++T
Sbjct: 157 EVFCWGQNKYG-QLGLGTDC-----KKQTS---PQLLKSLLGIPFMQVAAGGAHSFVLTL 207
Query: 280 EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
G +F WG K G+LG D P L++ L + + CGE T ALTK G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267
Query: 340 HNNHGADLVGERRSRSHWL-PRKLFDTLDGVRVSKVACGEWHT-AIVSTSGQLFTYGDGT 397
+G +G S SH + PRK+F+ + + V+++ACG HT A V +SG+++++G G
Sbjct: 268 AGGYGQ--LGHN-STSHEINPRKVFELMGSI-VTEIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 398 FGVLGHGNLQNVSQPKEVE 416
G LG G+ N P V+
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
Score = 48 (22.0 bits), Expect = 3.9e-25, Sum P(2) = 3.9e-25
Identities = 10/35 (28%), Positives = 19/35 (54%)
Query: 688 SPRNLLNLQGSLSEEV---KEEKGALTPSRGQSFT 719
+PR + L GS+ E+ ++ A PS G+ ++
Sbjct: 284 NPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYS 318
>MGI|MGI:1914595 [details] [associations]
symbol:Herc4 "hect domain and RLD 4" species:10090 "Mus
musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA;TAS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=IBA] [GO:0006464 "cellular protein modification process"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IMP]
[GO:0016567 "protein ubiquitination" evidence=TAS] [GO:0016874
"ligase activity" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
UniPathway:UPA00143 MGI:MGI:1914595 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005829 GO:GO:0005634 GO:GO:0005737 GO:GO:0030154
GO:GO:0007283 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00660000095216 HOVERGEN:HBG050878 HSSP:Q9UEP9
CTD:26091 KO:K10615 EMBL:AK009436 EMBL:AK143111 EMBL:AK145735
EMBL:AK147723 EMBL:BC026855 EMBL:BC043082 EMBL:BC047157
EMBL:BC060033 IPI:IPI00453903 IPI:IPI00554980 IPI:IPI00828240
RefSeq:NP_080377.2 RefSeq:NP_084390.1 UniGene:Mm.234437
UniGene:Mm.422789 UniGene:Mm.441725 UniGene:Mm.487274
ProteinModelPortal:Q6PAV2 SMR:Q6PAV2 STRING:Q6PAV2
PhosphoSite:Q6PAV2 PaxDb:Q6PAV2 PRIDE:Q6PAV2
Ensembl:ENSMUST00000020258 GeneID:67345 KEGG:mmu:67345
UCSC:uc007fka.2 UCSC:uc007fkc.2 UCSC:uc007fkd.2 InParanoid:Q6PAV2
OMA:KLVIQPT OrthoDB:EOG44XJG1 NextBio:324318 Bgee:Q6PAV2
CleanEx:MM_HERC4 Genevestigator:Q6PAV2 Uniprot:Q6PAV2
Length = 1057
Score = 383 (139.9 bits), Expect = 1.4e-31, P = 1.4e-31
Identities = 114/405 (28%), Positives = 185/405 (45%)
Query: 234 GGAVDGSVSQNKTQVDALL-PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDG 292
G A G + + +L P+ + V V+++ G +H V +G V+ G G
Sbjct: 5 GNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64
Query: 293 RLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGA-DLVGER 351
+LGH+ + P+ V L N+ +V+CGE T AL G++Y WG ++ G L G
Sbjct: 65 QLGHEKSRKK--PEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSE 122
Query: 352 RSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHG-NLQNVS 410
+PR + +L +++ +VACG +H+ +S + ++F +G +G LG G + Q +
Sbjct: 123 ECIR--VPRNI-KSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQT 179
Query: 411 QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGE 470
P+ ++SL G+ VA G H+ + + G +F WG G+LG D
Sbjct: 180 SPQLIKSLLGIPFMQVAAGGAHSFVLT-----------LSGAIFGWGRNKFGQLGLNDEN 228
Query: 471 RKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVE 530
+ +P + L V CG T LT G V+T G+ +GQLG+
Sbjct: 229 DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Query: 531 GKLKEEFVKGISSGSYHV-AVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQ 589
+L V ++ G H A + S G +Y++G NGQLG G + R++P V+ +
Sbjct: 289 FELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG--NWF 346
Query: 590 VESVVCGSSITAA--ICLHKSISVGDQS-----SCSQCRMPFGFR 627
+ C I + C+ + S GDQS S C P FR
Sbjct: 347 SYNGQCPQDIGSEDYFCVKRIFSGGDQSFSHYSSPQNCGPPDDFR 391
Score = 341 (125.1 bits), Expect = 5.0e-27, P = 5.0e-27
Identities = 95/324 (29%), Positives = 153/324 (47%)
Query: 283 VFCWGEGKDGRLG-HKVNMDVSC-PKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
+ CWG G+LG ++ ++ P+ + V+ V CG T + G +YT G
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
N+ G +G +SR P ++ LD + VACGE HT ++ GQ++ +G + G
Sbjct: 61 NDLGQ--LGHEKSRKK--PEQVV-ALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQ 115
Query: 401 LG-HGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
LG G+ + + P+ ++SL +++ VACG +H+ A+ S A ++F WG
Sbjct: 116 LGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLAL---------SKA--SEVFCWGQN 164
Query: 460 DKGRLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
G+LG +D +++ P + L+ F+Q + G + LT G ++ G GQLG
Sbjct: 165 KYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET 578
DR + + L+ + + I G H A LT G V+T+G GQLG +
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN 284
Query: 579 PTFVEALRDRQVESVVCGSSITAA 602
P V L V V CG T+A
Sbjct: 285 PRKVFELMGSIVTQVACGRQHTSA 308
Score = 308 (113.5 bits), Expect = 1.9e-23, P = 1.9e-23
Identities = 83/270 (30%), Positives = 135/270 (50%)
Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
WG+ ++G +G PR+ D +V V CG HT V G ++T G
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRS-DFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCND 62
Query: 398 FGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
G LGH + +P++V +L + +VACG HT A+ D G+++ WG
Sbjct: 63 LGQLGHEKSRK--KPEQVVALDAQNIVAVACGEAHTLALND-----------KGQVYAWG 109
Query: 458 -DADKGRLGHVDGERKL-LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQ 515
D+D G+LG E + +P + L D VQ +CG ++ L+ +V+ G +GQ
Sbjct: 110 LDSD-GQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQ 168
Query: 516 LGN--PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDS 573
LG K S +++ L F++ +++G H VLT G+++ WG+N GQLGL D
Sbjct: 169 LGLGIDCQKQTSPQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE 227
Query: 574 QERETPTFVEALRDRQVESVVCGSSITAAI 603
+R P +++LR +++ + CG TAA+
Sbjct: 228 NDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257
Score = 269 (99.8 bits), Expect = 3.0e-19, P = 3.0e-19
Identities = 66/199 (33%), Positives = 107/199 (53%)
Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
+V WG+ G +G +D Q +T P+L++S + + ++ G H+ ++T
Sbjct: 157 EVFCWGQNKYG-QLGLGID---CQKQTS-----PQLIKSLLGIPFMQVAAGGAHSFVLTL 207
Query: 280 EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
G +F WG K G+LG D P L++ L + + CGE T ALTK G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267
Query: 340 HNNHGADLVGERRSRSHWL-PRKLFDTLDGVRVSKVACGEWHT-AIVSTSGQLFTYGDGT 397
+G +G S SH + PRK+F+ + + V++VACG HT A V +SG+++++G G
Sbjct: 268 AGGYGQ--LGHN-STSHEINPRKVFELMGSI-VTQVACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 398 FGVLGHGNLQNVSQPKEVE 416
G LG G+ N P V+
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>ZFIN|ZDB-GENE-081015-2 [details] [associations]
symbol:rpgrb "retinitis pigmentosa GTPase regulator
b" species:7955 "Danio rerio" [GO:0060287 "epithelial cilium
movement involved in determination of left/right asymmetry"
evidence=IMP] [GO:0060271 "cilium morphogenesis" evidence=IMP]
[GO:0010842 "retina layer formation" evidence=IMP] [GO:0060041
"retina development in camera-type eye" evidence=IMP] [GO:0007018
"microtubule-based movement" evidence=IMP] INTERPRO:IPR000408
Pfam:PF00415 ZFIN:ZDB-GENE-081015-2 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0010842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0060271 GO:GO:0060287
GeneTree:ENSGT00700000104160 EMBL:CR450831 IPI:IPI00798788
RefSeq:XP_685964.5 UniGene:Dr.100975 Ensembl:ENSDART00000088624
GeneID:557752 KEGG:dre:557752 CTD:557752 NextBio:20882140
Bgee:F1QM29 Uniprot:F1QM29
Length = 1413
Score = 379 (138.5 bits), Expect = 2.1e-31, Sum P(2) = 2.1e-31
Identities = 110/337 (32%), Positives = 169/337 (50%)
Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQT 326
IS G +H ALVT+ G++F +G G+LG V+ P V+ L V+ +CG T
Sbjct: 41 ISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALKSERVKLTACGRTHT 100
Query: 327 CALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVST 386
T G +Y G NN G +G+ R+ + + F+ +++ +A G +A ++
Sbjct: 101 LVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQGPIKM--LAAGSNTSAALTQ 158
Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
G+L+ +GD + G +G G N P+EV G +V V+CG +H+A + VD
Sbjct: 159 DGRLYMWGDNSEGQIGLGKESNALTPQEVSV--GKRVFWVSCGYYHSAFVT---VD---- 209
Query: 447 NAIGGKLFTWGDADKGRLGHVDGERKL---LPTCVTRLVDFDFVQASCGRMLTVGLTGLG 503
G L+T+G+ D G+LG + E+ +P VT + D VQ +CG TV LT
Sbjct: 210 ----GALYTFGEKDSGKLG-LSTEKLANHKVPQQVTDIPD-RVVQVACGGGHTVALTE-N 262
Query: 504 KVYTMGSAVHGQLGNPKA--KDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWG 561
+VY+ G GQLG+ + R VVE ++ VK + G H A++T G +YT+G
Sbjct: 263 EVYSFGLGQFGQLGHGTFIFESRLPRVVE-HFRKGRVKHAACGENHTALITDNGLLYTFG 321
Query: 562 KNANGQLGLGDSQ--ERETPTFVEALRDRQVESVVCG 596
+G+LGLG+ + PT D V SV CG
Sbjct: 322 DGRHGKLGLGEENFTNQFKPTLCPRFLDYHVHSVTCG 358
Score = 289 (106.8 bits), Expect = 1.7e-20, Sum P(3) = 1.7e-20
Identities = 72/232 (31%), Positives = 120/232 (51%)
Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
++ ++ G+ +A +T++G ++ WG+ +G++G + P+ V G V VSCG
Sbjct: 143 IKMLAAGSNTSAALTQDGRLYMWGDNSEGQIGLGKESNALTPQEVSV--GKRVFWVSCGY 200
Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
+ + +T G +YT+G + G + + +H +P+++ D D RV +VACG HT +
Sbjct: 201 YHSAFVTVDGALYTFGEKDSGKLGLSTEKLANHKVPQQVTDIPD--RVVQVACGGGHT-V 257
Query: 384 VSTSGQLFTYGDGTFGVLGHGNLQNVSQ-PKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
T +++++G G FG LGHG S+ P+ VE R +VK ACG HTA I D
Sbjct: 258 ALTENEVYSFGLGQFGQLGHGTFIFESRLPRVVEHFRKGRVKHAACGENHTALITD---- 313
Query: 443 RCKSNAIGGKLFTWGDADKGRLG--HVDGERKLLPTCVTRLVDFDFVQASCG 492
G L+T+GD G+LG + + PT R +D+ +CG
Sbjct: 314 -------NGLLYTFGDGRHGKLGLGEENFTNQFKPTLCPRFLDYHVHSVTCG 358
Score = 255 (94.8 bits), Expect = 7.5e-17, Sum P(3) = 7.5e-17
Identities = 79/248 (31%), Positives = 127/248 (51%)
Query: 373 KVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWH 432
+++CG+ HTA+V+ +G+LF +G +G LG G V++P V++L+ +VK ACG H
Sbjct: 40 RISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALKSERVKLTACGRTH 99
Query: 433 TAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCG 492
T + R G L+ G ++G+LG D + T LV+F F +
Sbjct: 100 TL----VFTSR-------GNLYACGGNNEGQLGLGDCNDR---TSF-HLVEF-FNKQGPI 143
Query: 493 RMLTVG------LTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSY 546
+ML G LT G++Y G GQ+G K + ++T E + + V +S G Y
Sbjct: 144 KMLAAGSNTSAALTQDGRLYMWGDNSEGQIGLGK-ESNALTPQEVSVGKR-VFWVSCGYY 201
Query: 547 HVAVLTSGGSVYTWGKNANGQLGLGDSQ--ERETPTFVEALRDRQVESVVCGSSITAAIC 604
H A +T G++YT+G+ +G+LGL + + P V + DR V+ V CG T A+
Sbjct: 202 HSAFVTVDGALYTFGEKDSGKLGLSTEKLANHKVPQQVTDIPDRVVQ-VACGGGHTVALT 260
Query: 605 LHKSISVG 612
++ S G
Sbjct: 261 ENEVYSFG 268
Score = 242 (90.2 bits), Expect = 4.6e-15, Sum P(3) = 4.6e-15
Identities = 130/544 (23%), Positives = 228/544 (41%)
Query: 319 VSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGE 378
+SCG+ T +T++G+++ +G NN G +G + + + P + L RV ACG
Sbjct: 41 ISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNK--PTCV-KALKSERVKLTACGR 97
Query: 379 WHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVE--SLRGLKVKSVACGPWHTAAI 436
HT + ++ G L+ G G LG G+ + + VE + +G +K +A G +AA+
Sbjct: 98 THTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQG-PIKMLAAGSNTSAAL 156
Query: 437 VDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLT 496
G+L+ WGD +G++G L P V+ V SCG +
Sbjct: 157 TQ-----------DGRLYMWGDNSEGQIGLGKESNALTPQEVS--VGKRVFWVSCGYYHS 203
Query: 497 VGLTGLGKVYTMGSAVHGQLG--NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSG 554
+T G +YT G G+LG K + + + + V+ ++ G H LT
Sbjct: 204 AFVTVDGALYTFGEKDSGKLGLSTEKLANHKVPQQVTDIPDRVVQ-VACGGGHTVALTEN 262
Query: 555 GSVYTWGKNANGQLGLGDSQ-ERETPTFVEALRDRQVESVVCGSSITAAIC--------- 604
VY++G GQLG G E P VE R +V+ CG + TA I
Sbjct: 263 -EVYSFGLGQFGQLGHGTFIFESRLPRVVEHFRKGRVKHAACGENHTALITDNGLLYTFG 321
Query: 605 --LHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNKGKPS 662
H + +G+++ +Q + R ++ ++ C C ++ A P +P
Sbjct: 322 DGRHGKLGLGEENFTNQFKPTLCPRFLDYHVHSVT---CGGCHM--LVLAK--PRTERPD 374
Query: 663 RVC----DTCYNHLQKITHSGRLLKQENQSPRNLLNLQGSLSEEVKEEKGALTPSR-GQS 717
+ D ++L+K +++ L +Q+ L SLS V+ + +P + GQ
Sbjct: 375 DLILEEDDVTEDYLEK-SYTELLGDTHSQT-----TLNRSLSARVRRRERERSPDQFGQM 428
Query: 718 FTSKQSRNVERKPGECLESA---SSLSSGLQRWGQVSCP-IRFKTHCHEKSVEPTPIPKT 773
F + + + + + S SS G + P IR K+ SVE + K
Sbjct: 429 FRTLPALSGNQSASLSVPSQIRPSSKQLGKIPHNSLKTPGIRAKSFDDRSSVEDSESVKD 488
Query: 774 QMSTHSPL----LRKISLGSNFIPIASTVEKDLSESNKMLNEEVQRLRDQARNLEKQCQI 829
T L + K+ N + + S +EK + K +E + RD+ K+ ++
Sbjct: 489 LGETTDLLNLTHIMKMDPSDNTLTL-SPMEKKKVKVVKEHGKEKGKPRDEPTPYSKRAEL 547
Query: 830 GNQK 833
++K
Sbjct: 548 LSRK 551
Score = 158 (60.7 bits), Expect = 2.8e-06, Sum P(4) = 2.8e-06
Identities = 47/132 (35%), Positives = 67/132 (50%)
Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAVHGQLG-NPKAKDRSITVVEGKLKEEFVKGISSGS 545
++ SCG T +T GK++ GS GQLG K T V+ LK E VK + G
Sbjct: 39 LRISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNKPTCVKA-LKSERVKLTACGR 97
Query: 546 YHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDR-QVESVVCGSSITAAIC 604
H V TS G++Y G N GQLGLGD +R + VE + ++ + GS+ +AA+
Sbjct: 98 THTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQGPIKMLAAGSNTSAALT 157
Query: 605 LHKSISV-GDQS 615
+ + GD S
Sbjct: 158 QDGRLYMWGDNS 169
Score = 59 (25.8 bits), Expect = 2.1e-31, Sum P(2) = 2.1e-31
Identities = 71/337 (21%), Positives = 124/337 (36%)
Query: 642 SACSTKKIINASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQGSLSE 701
SA + K +K K +++ T + ++ S L +ENQ N L SL +
Sbjct: 767 SAKTKKSRAEQRQVEDKLKKTKMVPTVVSEAASVSESA-LESEENQMKDNPLTKVTSLLQ 825
Query: 702 EVKEEKGALTPSRGQSFTSK---QSRNVER-KP---GECLESASSLSSGLQRWGQVSCPI 754
+ AL G++ S+ QS E KP L SSLS GQ
Sbjct: 826 GMGMGGSALLV--GEAVASQLLSQSTPQEMPKPLSRQRTLSDVSSLSESYDVSGQEEARE 883
Query: 755 RFKTHCHEKSVEPTPIPKTQMSTHSPLLRKISLGSNFIPI-ASTVEKDLSESNKMLNEEV 813
+T +V+ P + + S K S E D ES +NE
Sbjct: 884 AERTAV-TINVKADPDTSDRDTERSRSESKTDAHSEMGTYNRKEEESDEEESEGSVNE-- 940
Query: 814 QRLRDQARNLEKQCQIGNQKVQECQQKIEEAWSLARXXXXXXXXXXXXXXXLAVRLHTLS 873
RD+ ++E+ +GN++ + +++E++ S + S
Sbjct: 941 ---RDETEDVEESDGLGNRR--DKSEEVEDSDSKTHDKVGENDDDSEGDEDDDTMIKDSS 995
Query: 874 EKISAAKEAKEGVDANLPPKLDTDKHPEVKLPKDRKVDSLCSSPIVFSNKLKSVYGRELC 933
E+ ++E K D + ++ E + D +V+ + S++ + E
Sbjct: 996 EE-EESEEEKTVNDTVTKASSENEEREEEEKSNDSEVNDTMTK---HSSEDEEKEKEEKS 1051
Query: 934 HDNSSGSVEDSKVARTEPQQKGTKASKLEYAEQYEPG 970
D+S+ S ED + E KAS + E+ + G
Sbjct: 1052 SDSSNASSEDEE--EEEKNGDSAKASSEDEEEEEKSG 1086
Score = 54 (24.1 bits), Expect = 3.1e-30, Sum P(3) = 3.1e-30
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 935 DNSSGSVEDSKVARTEPQQKGTKASKLEYAEQYEPG 970
+N E+SKV E + + ++ E AE+ EPG
Sbjct: 1277 ENEEEEEEESKVEEEEEESNEEEENEEEEAEEEEPG 1312
Score = 42 (19.8 bits), Expect = 3.1e-30, Sum P(3) = 3.1e-30
Identities = 14/47 (29%), Positives = 19/47 (40%)
Query: 700 SEEVKEEKGALTPSRGQSFTSKQSRNVERKPGECLESASSLSSGLQR 746
+EE K E A T K + E + GE ES + S +R
Sbjct: 1151 NEEEKSETSASTEDESNDDEDKSETSQEEESGE--ESEGNSESRSER 1195
Score = 40 (19.1 bits), Expect = 2.8e-06, Sum P(4) = 2.8e-06
Identities = 15/55 (27%), Positives = 23/55 (41%)
Query: 384 VSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVD 438
+ SG +FT+G F N + K LR ++CG HTA + +
Sbjct: 9 IPESGAVFTFGKSKFA----DNAPSKFWLKNDVPLR------ISCGDEHTALVTE 53
Score = 38 (18.4 bits), Expect = 8.2e-30, Sum P(3) = 8.2e-30
Identities = 11/45 (24%), Positives = 23/45 (51%)
Query: 798 VEKDLSESNKMLNEEVQRLRDQARNLEKQCQIGNQKVQECQQKIE 842
V+K +E + N+EV+ R + + Q G K ++ Q +++
Sbjct: 631 VKKQSTEKTQQ-NQEVEVQRSKGTSKPTQEGTGKAKAKDHQLEVK 674
>UNIPROTKB|E2RFW5 [details] [associations]
symbol:HERC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:26091 KO:K10615 EMBL:AAEX03002773
GeneID:479225 KEGG:cfa:479225 RefSeq:XP_536367.2
Ensembl:ENSCAFT00000021404 Uniprot:E2RFW5
Length = 1049
Score = 381 (139.2 bits), Expect = 2.3e-31, P = 2.3e-31
Identities = 109/388 (28%), Positives = 181/388 (46%)
Query: 234 GGAVDGSVSQNKTQVDALL-PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDG 292
G A G + + +L P+ + + V+++ G +H V +G V+ G G
Sbjct: 5 GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64
Query: 293 RLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGA-DLVGER 351
+LGH+ + P+ V L N+ +VSCGE T AL G++Y WG ++ G L+G
Sbjct: 65 QLGHEKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE 122
Query: 352 RSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHG-NLQNVS 410
+PR + +L +++ +VACG +H+ +S + ++F +G +G LG G + + +
Sbjct: 123 ECIR--VPRNI-KSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQA 179
Query: 411 QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGE 470
P+ ++SL G+ VA G H+ + + G +F WG G+LG D
Sbjct: 180 SPQLIKSLLGIPFMQVAAGGAHSFVLT-----------LSGAIFGWGRNKFGQLGLNDEN 228
Query: 471 RKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVE 530
+ +P + L V CG T LT G V+T G+ +GQLG+
Sbjct: 229 DRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Query: 531 GKLKEEFVKGISSGSYHV-AVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQ 589
+L V I+ G H A + S G +Y++G NGQLG G + R++P V+ +
Sbjct: 289 FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG--NWF 346
Query: 590 VESVVCGSSITAA--ICLHKSISVGDQS 615
+ C I + C+ + S GDQS
Sbjct: 347 PYNGQCPPDIDSEEYFCVKRIFSGGDQS 374
Score = 335 (123.0 bits), Expect = 2.2e-26, P = 2.2e-26
Identities = 95/326 (29%), Positives = 152/326 (46%)
Query: 283 VFCWGEGKDGRLG-HKVNMDVSC-PKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
+ CWG G+LG ++ ++ P+ + V+ V CG T + G +YT G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYG---DGT 397
N+ G +G +SR P ++ LD + V+CGE HT ++ GQ++ +G DG
Sbjct: 61 NDLGQ--LGHEKSRKK--PEQVV-ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115
Query: 398 FGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
G+LG V P+ ++SL +++ VACG +H+ A+ S A ++F WG
Sbjct: 116 LGLLGSEECIRV--PRNIKSLSDIQIVQVACGYYHSLAL---------SKA--SEVFCWG 162
Query: 458 DADKGRLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
G+LG +D +++ P + L+ F+Q + G + LT G ++ G GQL
Sbjct: 163 QNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQL 222
Query: 517 GNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQER 576
G DR + + L+ + + I G H A LT G V+T+G GQLG +
Sbjct: 223 GLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHE 282
Query: 577 ETPTFVEALRDRQVESVVCGSSITAA 602
P V L V + CG T+A
Sbjct: 283 INPRKVFELMGSIVTQIACGRQHTSA 308
Score = 307 (113.1 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 83/270 (30%), Positives = 135/270 (50%)
Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
WG+ + G +G PRK D +V V CG HT V G ++T G
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKS-DFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCND 62
Query: 398 FGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
G LGH + +P++V +L + +V+CG HT A+ D G+++ WG
Sbjct: 63 LGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALND-----------KGQVYAWG 109
Query: 458 -DADKGRLGHVDGERKL-LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQ 515
D+D G+LG + E + +P + L D VQ +CG ++ L+ +V+ G +GQ
Sbjct: 110 LDSD-GQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQ 168
Query: 516 LGN--PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDS 573
LG K S +++ L F++ +++G H VLT G+++ WG+N GQLGL D
Sbjct: 169 LGLGIDCKKQASPQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE 227
Query: 574 QERETPTFVEALRDRQVESVVCGSSITAAI 603
+R P +++LR +++ + CG TAA+
Sbjct: 228 NDRYVPNLLKSLRTQKIVYICCGEDHTAAL 257
Score = 262 (97.3 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 65/199 (32%), Positives = 106/199 (53%)
Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
+V WG+ G +G +D K Q P+L++S + + ++ G H+ ++T
Sbjct: 157 EVFCWGQNKYG-QLGLGIDC-----KKQAS---PQLIKSLLGIPFMQVAAGGAHSFVLTL 207
Query: 280 EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
G +F WG K G+LG D P L++ L + + CGE T ALTK G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFG 267
Query: 340 HNNHGADLVGERRSRSHWL-PRKLFDTLDGVRVSKVACGEWHT-AIVSTSGQLFTYGDGT 397
+G +G S SH + PRK+F+ + + V+++ACG HT A V +SG+++++G G
Sbjct: 268 AGGYGQ--LGHN-STSHEINPRKVFELMGSI-VTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 398 FGVLGHGNLQNVSQPKEVE 416
G LG G+ N P V+
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>UNIPROTKB|E2RFV1 [details] [associations]
symbol:HERC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:26091 KO:K10615 OMA:KLVIQPT
EMBL:AAEX03002773 RefSeq:XP_849808.1 Ensembl:ENSCAFT00000021413
GeneID:479225 KEGG:cfa:479225 NextBio:20854436 Uniprot:E2RFV1
Length = 1057
Score = 381 (139.2 bits), Expect = 2.4e-31, P = 2.4e-31
Identities = 109/388 (28%), Positives = 181/388 (46%)
Query: 234 GGAVDGSVSQNKTQVDALL-PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDG 292
G A G + + +L P+ + + V+++ G +H V +G V+ G G
Sbjct: 5 GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64
Query: 293 RLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGA-DLVGER 351
+LGH+ + P+ V L N+ +VSCGE T AL G++Y WG ++ G L+G
Sbjct: 65 QLGHEKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE 122
Query: 352 RSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHG-NLQNVS 410
+PR + +L +++ +VACG +H+ +S + ++F +G +G LG G + + +
Sbjct: 123 ECIR--VPRNI-KSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQA 179
Query: 411 QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGE 470
P+ ++SL G+ VA G H+ + + G +F WG G+LG D
Sbjct: 180 SPQLIKSLLGIPFMQVAAGGAHSFVLT-----------LSGAIFGWGRNKFGQLGLNDEN 228
Query: 471 RKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVE 530
+ +P + L V CG T LT G V+T G+ +GQLG+
Sbjct: 229 DRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Query: 531 GKLKEEFVKGISSGSYHV-AVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQ 589
+L V I+ G H A + S G +Y++G NGQLG G + R++P V+ +
Sbjct: 289 FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG--NWF 346
Query: 590 VESVVCGSSITAA--ICLHKSISVGDQS 615
+ C I + C+ + S GDQS
Sbjct: 347 PYNGQCPPDIDSEEYFCVKRIFSGGDQS 374
Score = 335 (123.0 bits), Expect = 2.2e-26, P = 2.2e-26
Identities = 95/326 (29%), Positives = 152/326 (46%)
Query: 283 VFCWGEGKDGRLG-HKVNMDVSC-PKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
+ CWG G+LG ++ ++ P+ + V+ V CG T + G +YT G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYG---DGT 397
N+ G +G +SR P ++ LD + V+CGE HT ++ GQ++ +G DG
Sbjct: 61 NDLGQ--LGHEKSRKK--PEQVV-ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115
Query: 398 FGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
G+LG V P+ ++SL +++ VACG +H+ A+ S A ++F WG
Sbjct: 116 LGLLGSEECIRV--PRNIKSLSDIQIVQVACGYYHSLAL---------SKA--SEVFCWG 162
Query: 458 DADKGRLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
G+LG +D +++ P + L+ F+Q + G + LT G ++ G GQL
Sbjct: 163 QNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQL 222
Query: 517 GNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQER 576
G DR + + L+ + + I G H A LT G V+T+G GQLG +
Sbjct: 223 GLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHE 282
Query: 577 ETPTFVEALRDRQVESVVCGSSITAA 602
P V L V + CG T+A
Sbjct: 283 INPRKVFELMGSIVTQIACGRQHTSA 308
Score = 307 (113.1 bits), Expect = 2.4e-23, P = 2.4e-23
Identities = 83/270 (30%), Positives = 135/270 (50%)
Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
WG+ + G +G PRK D +V V CG HT V G ++T G
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKS-DFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCND 62
Query: 398 FGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
G LGH + +P++V +L + +V+CG HT A+ D G+++ WG
Sbjct: 63 LGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALND-----------KGQVYAWG 109
Query: 458 -DADKGRLGHVDGERKL-LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQ 515
D+D G+LG + E + +P + L D VQ +CG ++ L+ +V+ G +GQ
Sbjct: 110 LDSD-GQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQ 168
Query: 516 LGN--PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDS 573
LG K S +++ L F++ +++G H VLT G+++ WG+N GQLGL D
Sbjct: 169 LGLGIDCKKQASPQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE 227
Query: 574 QERETPTFVEALRDRQVESVVCGSSITAAI 603
+R P +++LR +++ + CG TAA+
Sbjct: 228 NDRYVPNLLKSLRTQKIVYICCGEDHTAAL 257
Score = 262 (97.3 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 65/199 (32%), Positives = 106/199 (53%)
Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
+V WG+ G +G +D K Q P+L++S + + ++ G H+ ++T
Sbjct: 157 EVFCWGQNKYG-QLGLGIDC-----KKQAS---PQLIKSLLGIPFMQVAAGGAHSFVLTL 207
Query: 280 EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
G +F WG K G+LG D P L++ L + + CGE T ALTK G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFG 267
Query: 340 HNNHGADLVGERRSRSHWL-PRKLFDTLDGVRVSKVACGEWHT-AIVSTSGQLFTYGDGT 397
+G +G S SH + PRK+F+ + + V+++ACG HT A V +SG+++++G G
Sbjct: 268 AGGYGQ--LGHN-STSHEINPRKVFELMGSI-VTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 398 FGVLGHGNLQNVSQPKEVE 416
G LG G+ N P V+
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>UNIPROTKB|E1BAV2 [details] [associations]
symbol:HERC4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007283 "spermatogenesis" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0007283 GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:26091 KO:K10615 OMA:KLVIQPT
EMBL:DAAA02061808 EMBL:DAAA02061809 EMBL:DAAA02061810
IPI:IPI00839181 RefSeq:NP_001070362.2 UniGene:Bt.15687
Ensembl:ENSBTAT00000018639 GeneID:533336 KEGG:bta:533336
NextBio:20876005 ArrayExpress:E1BAV2 Uniprot:E1BAV2
Length = 1057
Score = 376 (137.4 bits), Expect = 8.3e-31, P = 8.3e-31
Identities = 107/388 (27%), Positives = 180/388 (46%)
Query: 234 GGAVDGSVSQNKTQVDALL-PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDG 292
G A G + + +L P+ + + V+++ G +H V +G V+ G G
Sbjct: 5 GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64
Query: 293 RLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGA-DLVGER 351
+LGH+ + P+ V L N+ +VSCGE T AL G++Y WG ++ G L+G
Sbjct: 65 QLGHEKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE 122
Query: 352 RSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHG-NLQNVS 410
+PR + +L +++ +VACG +H+ +S + ++F +G +G LG G + + +
Sbjct: 123 ECIR--VPRNI-KSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQA 179
Query: 411 QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGE 470
P+ ++SL G+ +A G H+ + + G +F WG G+LG D
Sbjct: 180 SPQLIKSLLGIPFMQIAAGGAHSFVLT-----------LSGAIFGWGRNKFGQLGLNDEN 228
Query: 471 RKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVE 530
+ +P + L V CG T LT G V+T G+ +GQLG+
Sbjct: 229 DRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Query: 531 GKLKEEFVKGISSGSYHV-AVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQ 589
+L V I+ G H A + S G +Y++G NGQLG G + R++P V+ +
Sbjct: 289 FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG--NWF 346
Query: 590 VESVVCGSSITAA--ICLHKSISVGDQS 615
+ C + C+ + S GDQS
Sbjct: 347 PYNGQCPPDFDSEEYFCVKRIFSGGDQS 374
Score = 334 (122.6 bits), Expect = 2.9e-26, P = 2.9e-26
Identities = 95/326 (29%), Positives = 152/326 (46%)
Query: 283 VFCWGEGKDGRLG-HKVNMDVSC-PKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
+ CWG G+LG ++ ++ P+ + V+ V CG T + G +YT G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYG---DGT 397
N+ G +G +SR P ++ LD + V+CGE HT ++ GQ++ +G DG
Sbjct: 61 NDLGQ--LGHEKSRKK--PEQVV-ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115
Query: 398 FGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
G+LG V P+ ++SL +++ VACG +H+ A+ S A ++F WG
Sbjct: 116 LGLLGSEECIRV--PRNIKSLSDIQIVQVACGYYHSLAL---------SKA--SEVFCWG 162
Query: 458 DADKGRLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
G+LG +D +++ P + L+ F+Q + G + LT G ++ G GQL
Sbjct: 163 QNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQL 222
Query: 517 GNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQER 576
G DR + + L+ + + I G H A LT G V+T+G GQLG +
Sbjct: 223 GLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHE 282
Query: 577 ETPTFVEALRDRQVESVVCGSSITAA 602
P V L V + CG T+A
Sbjct: 283 INPRKVFELMGSIVTQIACGRQHTSA 308
Score = 308 (113.5 bits), Expect = 1.9e-23, P = 1.9e-23
Identities = 84/270 (31%), Positives = 135/270 (50%)
Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
WG+ + G +G PRK D +V V CG HT V G ++T G
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKS-DFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCND 62
Query: 398 FGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
G LGH + +P++V +L + +V+CG HT A+ D G+++ WG
Sbjct: 63 LGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALND-----------KGQVYAWG 109
Query: 458 -DADKGRLGHVDGERKL-LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQ 515
D+D G+LG + E + +P + L D VQ +CG ++ L+ +V+ G +GQ
Sbjct: 110 LDSD-GQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQ 168
Query: 516 LGN--PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDS 573
LG K S +++ L F++ I++G H VLT G+++ WG+N GQLGL D
Sbjct: 169 LGLGIDCKKQASPQLIKSLLGIPFMQ-IAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE 227
Query: 574 QERETPTFVEALRDRQVESVVCGSSITAAI 603
+R P +++LR +++ + CG TAA+
Sbjct: 228 NDRYVPNLLKSLRTQKIVYICCGEDHTAAL 257
Score = 263 (97.6 bits), Expect = 1.3e-18, P = 1.3e-18
Identities = 66/199 (33%), Positives = 106/199 (53%)
Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
+V WG+ G +G +D K Q P+L++S + + I+ G H+ ++T
Sbjct: 157 EVFCWGQNKYG-QLGLGIDC-----KKQAS---PQLIKSLLGIPFMQIAAGGAHSFVLTL 207
Query: 280 EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
G +F WG K G+LG D P L++ L + + CGE T ALTK G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFG 267
Query: 340 HNNHGADLVGERRSRSHWL-PRKLFDTLDGVRVSKVACGEWHT-AIVSTSGQLFTYGDGT 397
+G +G S SH + PRK+F+ + + V+++ACG HT A V +SG+++++G G
Sbjct: 268 AGGYGQ--LGHN-STSHEINPRKVFELMGSI-VTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 398 FGVLGHGNLQNVSQPKEVE 416
G LG G+ N P V+
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>UNIPROTKB|Q9UII4 [details] [associations]
symbol:HERC5 "E3 ISG15--protein ligase HERC5" species:9606
"Homo sapiens" [GO:0051607 "defense response to virus"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0005737
"cytoplasm" evidence=IBA] [GO:0042787 "protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IBA] [GO:0032020 "ISG15-protein conjugation" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0042296 "ISG15
ligase activity" evidence=IDA] [GO:0050688 "regulation of defense
response to virus" evidence=IDA] [GO:0000079 "regulation of
cyclin-dependent protein serine/threonine kinase activity"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0019221
"cytokine-mediated signaling pathway" evidence=TAS] [GO:0032480
"negative regulation of type I interferon production" evidence=TAS]
[GO:0045087 "innate immune response" evidence=TAS] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 EMBL:AY337518
EMBL:AB027289 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829
GO:GO:0005634 GO:GO:0048471 Reactome:REACT_6900 GO:GO:0000079
GO:GO:0045087 GO:GO:0019221 GO:GO:0051607 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
GO:GO:0032480 GO:GO:0050688 SUPFAM:SSF56204 eggNOG:COG5021
HOGENOM:HOG000208452 HOVERGEN:HBG050878 EMBL:AC083829 EMBL:BC140716
IPI:IPI00008821 RefSeq:NP_057407.2 UniGene:Hs.26663
ProteinModelPortal:Q9UII4 SMR:Q9UII4 DIP:DIP-44200N IntAct:Q9UII4
STRING:Q9UII4 PhosphoSite:Q9UII4 DMDM:296434523 PaxDb:Q9UII4
PRIDE:Q9UII4 Ensembl:ENST00000264350 GeneID:51191 KEGG:hsa:51191
UCSC:uc003hrt.3 CTD:51191 GeneCards:GC04P089378 H-InvDB:HIX0200636
HGNC:HGNC:24368 HPA:HPA043929 MIM:608242 neXtProt:NX_Q9UII4
PharmGKB:PA134973940 InParanoid:Q9UII4 OMA:KDWITNT
OrthoDB:EOG4N30N6 PhylomeDB:Q9UII4 GenomeRNAi:51191 NextBio:54182
ArrayExpress:Q9UII4 Bgee:Q9UII4 CleanEx:HS_HERC5
Genevestigator:Q9UII4 GermOnline:ENSG00000138646 GO:GO:0042296
GO:GO:0032020 Uniprot:Q9UII4
Length = 1024
Score = 365 (133.5 bits), Expect = 7.6e-30, Sum P(2) = 7.6e-30
Identities = 100/347 (28%), Positives = 169/347 (48%)
Query: 250 ALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVE 309
A PK ++ + + ++ GA+H +++ +G+ F + N + +
Sbjct: 85 ARTPKCIKLGKNMKIHSVDQGAEHMLILSSDGKPFEYD-----------NYSMKHLRFES 133
Query: 310 CLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGV 369
L + ++CG++ + AL+K GE++ WG N HG VG R+ S P+ + + L GV
Sbjct: 134 ILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVG-RKFPSTTTPQ-IVEHLAGV 191
Query: 370 RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACG 429
+++++ GE H+ +S SG ++++G G LG G+ ++ P +E L KV+ VACG
Sbjct: 192 PLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACG 251
Query: 430 PWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQA 489
H+A + G LFT+G G+LGH + +L P V LV + Q
Sbjct: 252 GSHSALLTQ-----------DGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQI 300
Query: 490 SCGRMLTVG-LTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHV 548
+CGR T+ ++ LGKV++ GS GQLGN +D+ + + E +K S S
Sbjct: 301 ACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPVKVSSSEELKLESHTSEKE 360
Query: 549 AVLTSGG--SVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESV 593
++ +GG S+ W K N + L +R PT E R + V
Sbjct: 361 LIMIAGGNQSILLWIKKENSYVNL----KRTIPTLNEGTVKRWIADV 403
Score = 253 (94.1 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 63/204 (30%), Positives = 108/204 (52%)
Query: 230 GGDI---GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCW 286
GG++ G + G + + P+++E + + IS G H+ ++ G ++ W
Sbjct: 156 GGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSW 215
Query: 287 GEGKDGRLG--HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHG 344
G+ + G+LG H + D P L+E L V+ V+CG + LT+ G ++T+G HG
Sbjct: 216 GKNECGQLGLGHTESKDD--PSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHG 273
Query: 345 ADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT-AIVSTSGQLFTYGDGTFGVLGH 403
+G +++ P L L G RV+++ACG WHT A VS G++F++G G G LG+
Sbjct: 274 Q--LGHNSTQNELRPC-LVAELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGN 330
Query: 404 GNLQN--VSQPKEVESLRGLKVKS 425
G ++ + P +V S LK++S
Sbjct: 331 GGTRDQLMPLPVKVSSSEELKLES 354
Score = 196 (74.1 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 42/119 (35%), Positives = 71/119 (59%)
Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSIT--VVEGKLKEEFVKGISSG 544
+Q +CG ++ L+ G+++ G +HGQLG + + T +VE L + IS+G
Sbjct: 141 IQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVE-HLAGVPLAQISAG 199
Query: 545 SYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
H L+ G++Y+WGKN GQLGLG ++ ++ P+ +E L +++VE V CG S +A +
Sbjct: 200 EAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSALL 258
Score = 128 (50.1 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 28/91 (30%), Positives = 47/91 (51%)
Query: 530 EGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDS-QERETPTFVEALRDR 588
E L+E+ + I+ G YH L+ GG ++ WG+N +GQLG+G TP VE L
Sbjct: 132 ESILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGV 191
Query: 589 QVESVVCGSSITAAICLHKSISVGDQSSCSQ 619
+ + G + + A+ + +I ++ C Q
Sbjct: 192 PLAQISAGEAHSMALSMSGNIYSWGKNECGQ 222
Score = 54 (24.1 bits), Expect = 7.6e-30, Sum P(2) = 7.6e-30
Identities = 17/47 (36%), Positives = 27/47 (57%)
Query: 669 YNHLQKIT--HSGRLLKQENQSPRNLLNLQGSLSEEVKEEKGALTPS 713
+N+L KI H+ LLK E S ++ L+ + EE +E + AL P+
Sbjct: 636 FNNLSKIKLLHTDTLLKIE--SKKHKAYLRSAAIEEERESEFALRPT 680
>RGD|1306366 [details] [associations]
symbol:Herc1 "HECT and RLD domain containing E3 ubiquitin
protein ligase family member 1" species:10116 "Rattus norvegicus"
[GO:0010507 "negative regulation of autophagy" evidence=ISO]
[GO:0021702 "cerebellar Purkinje cell differentiation"
evidence=ISO] [GO:0031175 "neuron projection development"
evidence=ISO] [GO:0050885 "neuromuscular process controlling
balance" evidence=ISO] RGD:1306366 INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 OrthoDB:EOG40GCPW
GeneTree:ENSGT00700000104312 IPI:IPI00765979
Ensembl:ENSRNOT00000049300 UCSC:RGD:1306366 Uniprot:D3Z9N9
Length = 1203
Score = 367 (134.2 bits), Expect = 9.8e-30, P = 9.8e-30
Identities = 102/358 (28%), Positives = 173/358 (48%)
Query: 268 SLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTC 327
S+ A +V++ EV+ WG +L + PKL S + Q++ G++ T
Sbjct: 359 SIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFS--DAQTIEAGQYCTF 416
Query: 328 ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR-VSKVACGEWHTAIVST 386
++ G + G ++G +G+ ++S L + F+ ++ VS + HT +T
Sbjct: 417 VISTDGSVRACGKGSYGRLGLGDSNNQST-LKKLTFEPHRSIKKVSSSKGSDGHTLAFTT 475
Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCK 445
G++F++GDG +G LGHGN PK ++ L+G V V+ G H+AA+ + D
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE---D--- 529
Query: 446 SNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK- 504
G+L+TWG+ D GRLGH D + +PT V + + + SCG T+ L+ G+
Sbjct: 530 -----GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRT 582
Query: 505 VYTMGSAVHGQLGNPKA-KDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKN 563
V++ G +G+LG+ + V+E L+ F++ + +GS LTS G VY WG
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQSSLALTSTGQVYAWGCG 641
Query: 564 ANGQLGLGDSQERET-PTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQC 620
A LG G S+ P +E L ++ + G S ++ + +S QC
Sbjct: 642 AC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQC 697
Score = 356 (130.4 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 112/362 (30%), Positives = 168/362 (46%)
Query: 246 TQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG-HKVNMDVSC 304
TQ L PKL S D Q I G +++ +G V G+G GRLG N +
Sbjct: 389 TQEKILQPKLAPS--FSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTL 446
Query: 305 PKLV-ECLSGINVQSVSCG-EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL 362
KL E I S S G + T A T GE+++WG ++G +G S + P+ +
Sbjct: 447 KKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGK--LGHGNSSTQKYPKLI 504
Query: 363 FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLK 422
L G V V+ G H+A V+ G+L+T+G+G FG LGHG+ + + P V+ +
Sbjct: 505 QGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN-- 562
Query: 423 VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLV 482
V V+CG HT A+ + G ++++G D G+LGH D R P + L
Sbjct: 563 VGEVSCGSSHTIAL----------SKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQ 612
Query: 483 DFDFVQASC-GRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGI 541
F++ C G ++ LT G+VY G G+ +A ++E +L + I
Sbjct: 613 GM-FIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRPKLIE-ELAATRIVDI 670
Query: 542 SSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGSSIT 600
S G H L+ VY WG N+ GQ G G+S T P V L ++ + G+S +
Sbjct: 671 SIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHS 730
Query: 601 AA 602
A
Sbjct: 731 LA 732
Score = 267 (99.0 bits), Expect = 5.9e-19, P = 5.9e-19
Identities = 82/287 (28%), Positives = 141/287 (49%)
Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQN-ISLGAKHAALVT 278
+V WG+G D G G+ S K PKL++ + V +S G +H+A VT
Sbjct: 478 EVFSWGDG----DYGKLGHGNSSTQK------YPKLIQGPLQGKVVVCVSAGYRHSAAVT 527
Query: 279 KEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGE-IYT 337
++GE++ WGEG GRLGH + + P LV+ +S NV VSCG T AL+K G +++
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWS 585
Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
+G ++G +G + + P K+ + L G+ + KV G + ++++GQ++ +G G
Sbjct: 586 FGGGDNGK--LGHGDTNRVYKP-KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA 642
Query: 398 FGVLGHGNLQNVS-QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
LG G+ + + +PK +E L ++ ++ G H C S + +++ W
Sbjct: 643 --CLGCGSSEATALRPKLIEELAATRIVDISIGDSH-----------CLSLSHDNEVYAW 689
Query: 457 GDADKGRLGHVDGERKLL-PTCVTRLVDFDFVQASCGRMLTVGLTGL 502
G+ G+ G + + P V+ L Q S G ++ T L
Sbjct: 690 GNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTAL 736
Score = 254 (94.5 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 68/227 (29%), Positives = 118/227 (51%)
Query: 220 DVMIWGEGVLGGDIGGAVDG-SVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVT 278
++ WGEG D G G S S+N +P L++ + +V +S G+ H ++
Sbjct: 531 ELYTWGEG----DFGRLGHGDSNSRN-------IPTLVKD--ISNVGEVSCGSSHTIALS 577
Query: 279 KEGE-VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
K+G V+ +G G +G+LGH V PK++E L G+ ++ V G + ALT +G++Y
Sbjct: 578 KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYA 637
Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
WG GA L G S + L KL + L R+ ++ G+ H +S +++ +G+ +
Sbjct: 638 WGC---GACL-GCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNS 693
Query: 398 FGVLGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
G G GN +++PK+V L G+ ++ ++ G H+ A + DR
Sbjct: 694 MGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDR 740
>RGD|1307803 [details] [associations]
symbol:Herc3 "HECT and RLD domain containing E3 ubiquitin
protein ligase 3" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] [GO:0005634
"nucleus" evidence=IBA] [GO:0005737 "cytoplasm" evidence=ISO;IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 RGD:1307803
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
SUPFAM:SSF56204 EMBL:CH474011 IPI:IPI00568958 UniGene:Rn.203362
Ensembl:ENSRNOT00000009694 UCSC:RGD:1307803 Uniprot:D3ZYI2
Length = 909
Score = 363 (132.8 bits), Expect = 1.6e-29, P = 1.6e-29
Identities = 94/322 (29%), Positives = 159/322 (49%)
Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
++ ++ G H+ + ++GEV+ G G+LGH+ + + P+ + L+ ++ V+CGE
Sbjct: 36 IKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHE--REGNKPEQIGALADQHIIHVACGE 93
Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
+ AL+ G++++WG + G +G + +L L+ + +V+CG WH
Sbjct: 94 SHSLALSDRGQLFSWGAGSDGQ--LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 384 VSTSGQLFTYGDGTFGVLGHGN-LQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
++ GQ FT+G + G LG G + + P+ V SL G+ + VA G H+ A+
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFAL------ 205
Query: 443 RCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGL 502
++ G +F WG + G+LG D + + P V L V SCG T LT
Sbjct: 206 -----SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKS 260
Query: 503 GKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWG 561
G V+T G+ GQLG+ D +L V I+ G H +A++ S G +Y +G
Sbjct: 261 GGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFG 320
Query: 562 KNANGQLGLGDSQERETPTFVE 583
A GQLG G + + P+ V+
Sbjct: 321 CGAKGQLGTGHTCNVKCPSPVK 342
Score = 346 (126.9 bits), Expect = 1.1e-27, P = 1.1e-27
Identities = 100/325 (30%), Positives = 150/325 (46%)
Query: 283 VFCWGEGKDGRLGHKVNMD--VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
+ CWG G+ G N+ V+ P++ +S +++ V+CG + L + GE+YT G
Sbjct: 1 MLCWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGV 60
Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
N G +G R + P ++ L + VACGE H+ +S GQLF++G G+ G
Sbjct: 61 NTKGQ--LGHEREGNK--PEQI-GALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQ 115
Query: 401 LGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
LG ++ V+ P+ ++ L + V+CG WH C + A G+ FTWG
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWH-----------CLALAADGQFFTWGKN 164
Query: 460 DKGRLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
G+LG + + P V L Q + G + L+ G V+ G GQLG
Sbjct: 165 SHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET 578
KDR L+ + V IS G H AVLT G V+T+G + GQLG +
Sbjct: 225 SDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVN 284
Query: 579 PTFVEALRDRQVESVVCGSSITAAI 603
P V L +V + CG T A+
Sbjct: 285 PRRVLELMGSEVTQIACGRQHTLAL 309
Score = 305 (112.4 bits), Expect = 3.0e-23, P = 3.0e-23
Identities = 77/251 (30%), Positives = 122/251 (48%)
Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
+ +VACG H+ + G+++T G T G LGH N +P+++ +L + VACG
Sbjct: 36 IKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGN--KPEQIGALADQHIIHVACGE 93
Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL-LPTCVTRLVDFDFVQA 489
H+ A+ D G+LF+WG G+LG + E + +P + +L +Q
Sbjct: 94 SHSLALSD-----------RGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQV 142
Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEF-VKGISSGSYHV 548
SCG + L G+ +T G HGQLG K + + E + +++G H
Sbjct: 143 SCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHS 202
Query: 549 AVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKS 608
L+ G+V+ WG N GQLGL D ++RE+P V+ LR ++V + CG TA +
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 262
Query: 609 ISVGDQSSCSQ 619
+ SC Q
Sbjct: 263 VFTFGAGSCGQ 273
Score = 298 (110.0 bits), Expect = 1.7e-22, P = 1.7e-22
Identities = 72/233 (30%), Positives = 116/233 (49%)
Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
G DG + T+ +P+L++ + +S G H + +G+ F WG+ G+
Sbjct: 109 GAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQ 168
Query: 294 LG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR 352
LG K + P+ V L GI + V+ G + AL+ SG ++ WG NN G + + +
Sbjct: 169 LGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEK 228
Query: 353 SRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
R KL T +V ++CGE HTA+++ SG +FT+G G+ G LGH ++ + P
Sbjct: 229 DRESPCHVKLLRTQ---KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNP 285
Query: 413 KEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG 465
+ V L G +V +ACG HT A+V G ++ +G KG+LG
Sbjct: 286 RRVLELMGSEVTQIACGRQHTLALVPS----------SGLIYAFGCGAKGQLG 328
>UNIPROTKB|F1NBC5 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 EMBL:AADN02016126 EMBL:AADN02016127
EMBL:AADN02016128 EMBL:AADN02016129 IPI:IPI00572483
Ensembl:ENSGALT00000016878 ArrayExpress:F1NBC5 Uniprot:F1NBC5
Length = 1050
Score = 374 (136.7 bits), Expect = 3.2e-29, Sum P(2) = 3.2e-29
Identities = 97/323 (30%), Positives = 161/323 (49%)
Query: 263 DVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCG 322
+V+ ++ G H+ + ++GEV+ G G+LGH+ + S P+ + L+G ++ V+CG
Sbjct: 35 NVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHE--SEGSKPEPIGALAGQHIVHVACG 92
Query: 323 EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTA 382
E + AL+ G++++WG + G L + +PR L L+ + +++CG WH
Sbjct: 93 ESHSVALSDQGQVFSWGAGSDG-QLGLTTIEDAVTVPR-LIKKLNQQTILQISCGNWHCL 150
Query: 383 IVSTSGQLFTYGDGTFGVLGHGN-LQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMV 441
++ GQ FT+G ++G LG G + + P+ V+SL G+ + VA G H+ A+
Sbjct: 151 ALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFAL----- 205
Query: 442 DRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTG 501
++ G +F WG G+LG D + P V L V SCG T LT
Sbjct: 206 ------SLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTK 259
Query: 502 LGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTW 560
G V+T G+ GQLG+ D +L V I+ G +H +A + S G +Y +
Sbjct: 260 SGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAF 319
Query: 561 GKNANGQLGLGDSQERETPTFVE 583
G GQLG G + + P+ V+
Sbjct: 320 GCGTRGQLGTGHTCNVKCPSPVK 342
Score = 349 (127.9 bits), Expect = 1.7e-26, Sum P(2) = 1.7e-26
Identities = 99/324 (30%), Positives = 147/324 (45%)
Query: 283 VFCWGEGKDGRLGHKVNMDVSCPK--LVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
+ CWG G+ G N+ V P+ + + NV+ V+CG + L + GE+YT G
Sbjct: 1 MLCWGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGL 60
Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
N G +G S P + L G + VACGE H+ +S GQ+F++G G+ G
Sbjct: 61 NTKGQ--LGHESEGSK--PEPI-GALAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQ 115
Query: 401 LGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
LG +++ V+ P+ ++ L + ++CG WH C + A G+ FTWG
Sbjct: 116 LGLTTIEDAVTVPRLIKKLNQQTILQISCGNWH-----------CLALAADGQFFTWGQN 164
Query: 460 DKGRLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
G+LG + + P V L Q + G + L+ G V+ G GQLG
Sbjct: 165 SYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGL 224
Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET 578
+DR L+ + V IS G H AVLT G V+T+G + GQLG +
Sbjct: 225 SDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN 284
Query: 579 PTFVEALRDRQVESVVCGSSITAA 602
P V L +V + CG T A
Sbjct: 285 PRRVLELMGSEVSQIACGRHHTLA 308
Score = 321 (118.1 bits), Expect = 1.9e-23, Sum P(2) = 1.9e-23
Identities = 83/285 (29%), Positives = 139/285 (48%)
Query: 338 WGHNNHGADLVGERRSRSHWLPR-KLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG 396
WG+++ G +G +P +++ + V +VACG H+ + G+++T G
Sbjct: 4 WGYSSFGQPGIGSNLQVI--IPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLN 61
Query: 397 TFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
T G LGH + S+P+ + +L G + VACG H+ A+ D G++F+W
Sbjct: 62 TKGQLGHES--EGSKPEPIGALAGQHIVHVACGESHSVALSD-----------QGQVFSW 108
Query: 457 GDADKGRLGHVDGERKL-LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQ 515
G G+LG E + +P + +L +Q SCG + L G+ +T G +GQ
Sbjct: 109 GAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQ 168
Query: 516 LGNPKAKDRSITVVEGKLKEEF-VKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQ 574
LG K + K + + +++G H L+ G+V+ WGKN++GQLGL D +
Sbjct: 169 LGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDER 228
Query: 575 ERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQ 619
+RE+P V+ LR ++V + CG TA + + SC Q
Sbjct: 229 DRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273
Score = 290 (107.1 bits), Expect = 4.3e-20, Sum P(2) = 4.3e-20
Identities = 71/233 (30%), Positives = 115/233 (49%)
Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
G DG + + +P+L++ + IS G H + +G+ F WG+ G+
Sbjct: 109 GAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQ 168
Query: 294 LG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR 352
LG K + P+ V+ L GI + V+ G + AL+ SG ++ WG N+ G + + R
Sbjct: 169 LGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDER 228
Query: 353 SRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
R KL L +V ++CGE HTA+++ SG +FT+G G+ G LGH ++ + P
Sbjct: 229 DRESPCHVKL---LRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP 285
Query: 413 KEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG 465
+ V L G +V +ACG HT A V G ++ +G +G+LG
Sbjct: 286 RRVLELMGSEVSQIACGRHHTLAFVPS----------SGMIYAFGCGTRGQLG 328
Score = 239 (89.2 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 56/165 (33%), Positives = 87/165 (52%)
Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
P+ ++S + + ++ G H+ ++ G VF WG+ G+LG D P V+ L
Sbjct: 181 PQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLR 240
Query: 313 GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVS 372
V +SCGE T LTKSG ++T+G + G +G PR++ + + G VS
Sbjct: 241 SQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ--LGHDSMNDEVNPRRVLELM-GSEVS 297
Query: 373 KVACGEWHT-AIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVE 416
++ACG HT A V +SG ++ +G GT G LG G+ NV P V+
Sbjct: 298 QIACGRHHTLAFVPSSGMIYAFGCGTRGQLGTGHTCNVKCPSPVK 342
Score = 39 (18.8 bits), Expect = 3.2e-29, Sum P(2) = 3.2e-29
Identities = 12/48 (25%), Positives = 25/48 (52%)
Query: 770 IPKTQMSTHSPLLRKISLGSNFIPIASTVEKDLSESNKMLNEEVQRLR 817
IP MS+ +++ + G ++P+A T +L + K ++E+ R
Sbjct: 990 IPIYGMSSLRIVIQSTANGEQYLPVAHTCY-NLLDLPKYSSKEILSAR 1036
Score = 37 (18.1 bits), Expect = 5.2e-29, Sum P(2) = 5.2e-29
Identities = 6/17 (35%), Positives = 10/17 (58%)
Query: 1007 NQVVVYQKYGIEEYSNL 1023
N + + YG+ E+ NL
Sbjct: 856 NFTICRESYGVTEHKNL 872
>UNIPROTKB|E1C514 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:SPAVDFR EMBL:AADN02016126
EMBL:AADN02016127 EMBL:AADN02016128 EMBL:AADN02016129
IPI:IPI00576498 Ensembl:ENSGALT00000016877 ArrayExpress:E1C514
Uniprot:E1C514
Length = 1050
Score = 373 (136.4 bits), Expect = 4.2e-29, Sum P(2) = 4.2e-29
Identities = 98/323 (30%), Positives = 160/323 (49%)
Query: 263 DVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCG 322
+V+ ++ G H+ + ++GEV+ G G+LGH+ + S P V L+G ++ V+CG
Sbjct: 35 NVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHE--SEGSKPAWVGTLAGQHIVHVACG 92
Query: 323 EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTA 382
E + AL+ G++++WG + G L + +PR L L+ + +++CG WH
Sbjct: 93 ESHSVALSDQGQVFSWGAGSDG-QLGLTTIEDAVTVPR-LIKKLNQQTILQISCGNWHCL 150
Query: 383 IVSTSGQLFTYGDGTFGVLGHGN-LQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMV 441
++ GQ FT+G ++G LG G + + P+ V+SL G+ + VA G H+ A+
Sbjct: 151 ALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFAL----- 205
Query: 442 DRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTG 501
++ G +F WG G+LG D + P V L V SCG T LT
Sbjct: 206 ------SLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTK 259
Query: 502 LGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTW 560
G V+T G+ GQLG+ D +L V I+ G +H +A + S G +Y +
Sbjct: 260 SGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAF 319
Query: 561 GKNANGQLGLGDSQERETPTFVE 583
G GQLG G + + P+ V+
Sbjct: 320 GCGTRGQLGTGHTCNVKCPSPVK 342
Score = 354 (129.7 bits), Expect = 4.9e-27, Sum P(2) = 4.9e-27
Identities = 101/325 (31%), Positives = 149/325 (45%)
Query: 283 VFCWGEGKDGRLGHKVNMDVSCPK--LVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
+ CWG G+ G N+ V P+ + + NV+ V+CG + L + GE+YT G
Sbjct: 1 MLCWGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGL 60
Query: 341 NNHGADLVGERR-SRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
N G L E S+ W+ TL G + VACGE H+ +S GQ+F++G G+ G
Sbjct: 61 NTKG-QLGHESEGSKPAWV-----GTLAGQHIVHVACGESHSVALSDQGQVFSWGAGSDG 114
Query: 400 VLGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
LG +++ V+ P+ ++ L + ++CG WH C + A G+ FTWG
Sbjct: 115 QLGLTTIEDAVTVPRLIKKLNQQTILQISCGNWH-----------CLALAADGQFFTWGQ 163
Query: 459 ADKGRLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG 517
G+LG + + P V L Q + G + L+ G V+ G GQLG
Sbjct: 164 NSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLG 223
Query: 518 NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERE 577
+DR L+ + V IS G H AVLT G V+T+G + GQLG +
Sbjct: 224 LSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV 283
Query: 578 TPTFVEALRDRQVESVVCGSSITAA 602
P V L +V + CG T A
Sbjct: 284 NPRRVLELMGSEVSQIACGRHHTLA 308
Score = 318 (117.0 bits), Expect = 4.0e-23, Sum P(2) = 4.0e-23
Identities = 84/285 (29%), Positives = 138/285 (48%)
Query: 338 WGHNNHGADLVGERRSRSHWLPR-KLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG 396
WG+++ G +G +P +++ + V +VACG H+ + G+++T G
Sbjct: 4 WGYSSFGQPGIGSNLQVI--IPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLN 61
Query: 397 TFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
T G LGH + S+P V +L G + VACG H+ A+ D G++F+W
Sbjct: 62 TKGQLGHES--EGSKPAWVGTLAGQHIVHVACGESHSVALSD-----------QGQVFSW 108
Query: 457 GDADKGRLGHVDGERKL-LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQ 515
G G+LG E + +P + +L +Q SCG + L G+ +T G +GQ
Sbjct: 109 GAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQ 168
Query: 516 LGNPKAKDRSITVVEGKLKEEF-VKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQ 574
LG K + K + + +++G H L+ G+V+ WGKN++GQLGL D +
Sbjct: 169 LGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDER 228
Query: 575 ERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQ 619
+RE+P V+ LR ++V + CG TA + + SC Q
Sbjct: 229 DRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273
Score = 290 (107.1 bits), Expect = 4.3e-20, Sum P(2) = 4.3e-20
Identities = 71/233 (30%), Positives = 115/233 (49%)
Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
G DG + + +P+L++ + IS G H + +G+ F WG+ G+
Sbjct: 109 GAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQ 168
Query: 294 LG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR 352
LG K + P+ V+ L GI + V+ G + AL+ SG ++ WG N+ G + + R
Sbjct: 169 LGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDER 228
Query: 353 SRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
R KL L +V ++CGE HTA+++ SG +FT+G G+ G LGH ++ + P
Sbjct: 229 DRESPCHVKL---LRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP 285
Query: 413 KEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG 465
+ V L G +V +ACG HT A V G ++ +G +G+LG
Sbjct: 286 RRVLELMGSEVSQIACGRHHTLAFVPS----------SGMIYAFGCGTRGQLG 328
Score = 239 (89.2 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 56/165 (33%), Positives = 87/165 (52%)
Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
P+ ++S + + ++ G H+ ++ G VF WG+ G+LG D P V+ L
Sbjct: 181 PQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLR 240
Query: 313 GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVS 372
V +SCGE T LTKSG ++T+G + G +G PR++ + + G VS
Sbjct: 241 SQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ--LGHDSMNDEVNPRRVLELM-GSEVS 297
Query: 373 KVACGEWHT-AIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVE 416
++ACG HT A V +SG ++ +G GT G LG G+ NV P V+
Sbjct: 298 QIACGRHHTLAFVPSSGMIYAFGCGTRGQLGTGHTCNVKCPSPVK 342
Score = 39 (18.8 bits), Expect = 4.2e-29, Sum P(2) = 4.2e-29
Identities = 12/48 (25%), Positives = 25/48 (52%)
Query: 770 IPKTQMSTHSPLLRKISLGSNFIPIASTVEKDLSESNKMLNEEVQRLR 817
IP MS+ +++ + G ++P+A T +L + K ++E+ R
Sbjct: 990 IPIYGMSSLRIVIQSTANGEQYLPVAHTCY-NLLDLPKYSSKEILSAR 1036
Score = 37 (18.1 bits), Expect = 6.7e-29, Sum P(2) = 6.7e-29
Identities = 6/17 (35%), Positives = 10/17 (58%)
Query: 1007 NQVVVYQKYGIEEYSNL 1023
N + + YG+ E+ NL
Sbjct: 856 NFTICRESYGVTEHKNL 872
>UNIPROTKB|F1RW66 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:8916 KO:K10614 OMA:SPAVDFR
EMBL:FP015981 EMBL:CU915521 RefSeq:XP_003129374.3 UniGene:Ssc.42366
Ensembl:ENSSSCT00000010082 GeneID:100517903 KEGG:ssc:100517903
Uniprot:F1RW66
Length = 1050
Score = 365 (133.5 bits), Expect = 5.7e-29, Sum P(2) = 5.7e-29
Identities = 99/323 (30%), Positives = 161/323 (49%)
Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
V+ ++ G H+ + ++GEV+ G G+LGH+ + + P+ + L+ ++ V+CGE
Sbjct: 36 VKEVACGGDHSVFLLEDGEVYTCGLNTKGQLGHE--REGNKPEQIGALADEHIVHVACGE 93
Query: 324 FQTCALTKSGEIYTWGHNNHGA-DLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTA 382
+ AL+ G++++WG + G L+ S + +PR L L+ + +V+CG WH
Sbjct: 94 SHSLALSDRGQLFSWGAGSDGQLGLMTTEESVA--VPR-LIQKLNQQTILQVSCGNWHCL 150
Query: 383 IVSTSGQLFTYGDGTFGVLGHGN-LQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMV 441
++ GQ FT+G + G LG G + + P+ V SL G+ + VA G H+ A+
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL----- 205
Query: 442 DRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTG 501
++ G +F WG + G+LG D E + P V L V SCG T LT
Sbjct: 206 ------SLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRAQKVVYISCGEEHTAVLTK 259
Query: 502 LGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTW 560
G V+T G+ GQLG+ D +L V I+ G H +A + S G +Y +
Sbjct: 260 SGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319
Query: 561 GKNANGQLGLGDSQERETPTFVE 583
G A GQLG G + + P+ V+
Sbjct: 320 GCGARGQLGTGHTCNVKCPSPVK 342
Score = 343 (125.8 bits), Expect = 1.4e-26, Sum P(2) = 1.4e-26
Identities = 100/324 (30%), Positives = 149/324 (45%)
Query: 283 VFCWGEGKDGRLGHKVNMD--VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
+ CWG G+ G N+ V+ P++ +S +V+ V+CG + L + GE+YT G
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGDHSVFLLEDGEVYTCGL 60
Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
N G +G R + P ++ L + VACGE H+ +S GQLF++G G+ G
Sbjct: 61 NTKGQ--LGHEREGNK--PEQI-GALADEHIVHVACGESHSLALSDRGQLFSWGAGSDGQ 115
Query: 401 LGHGNLQ-NVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
LG + +V+ P+ ++ L + V+CG WH C + A G+ FTWG
Sbjct: 116 LGLMTTEESVAVPRLIQKLNQQTILQVSCGNWH-----------CLALAADGQFFTWGKN 164
Query: 460 DKGRLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
G+LG + + P V L Q + G + L+ G V+ G GQLG
Sbjct: 165 SHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET 578
+DR L+ + V IS G H AVLT G V+T+G + GQLG +
Sbjct: 225 SDEEDRESPCHVKLLRAQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN 284
Query: 579 PTFVEALRDRQVESVVCGSSITAA 602
P V L +V + CG T A
Sbjct: 285 PRRVLELMGSEVTQIACGRQHTLA 308
Score = 307 (113.1 bits), Expect = 1.2e-22, Sum P(2) = 1.2e-22
Identities = 78/251 (31%), Positives = 122/251 (48%)
Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
V +VACG H+ + G+++T G T G LGH N +P+++ +L + VACG
Sbjct: 36 VKEVACGGDHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADEHIVHVACGE 93
Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL-LPTCVTRLVDFDFVQA 489
H+ A+ D G+LF+WG G+LG + E + +P + +L +Q
Sbjct: 94 SHSLALSD-----------RGQLFSWGAGSDGQLGLMTTEESVAVPRLIQKLNQQTILQV 142
Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEF-VKGISSGSYHV 548
SCG + L G+ +T G HGQLG K + + E + +++G H
Sbjct: 143 SCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHS 202
Query: 549 AVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKS 608
L+ G+V+ WG N GQLGL D ++RE+P V+ LR ++V + CG TA +
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRAQKVVYISCGEEHTAVLTKSGG 262
Query: 609 ISVGDQSSCSQ 619
+ SC Q
Sbjct: 263 VFTFGAGSCGQ 273
Score = 292 (107.8 bits), Expect = 4.9e-21, Sum P(2) = 4.9e-21
Identities = 66/205 (32%), Positives = 104/205 (50%)
Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
G DG + T+ +P+L++ + +S G H + +G+ F WG+ G+
Sbjct: 109 GAGSDGQLGLMTTEESVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQ 168
Query: 294 LG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR 352
LG K + P+ V L GI + V+ G + AL+ SG ++ WG NN G + +
Sbjct: 169 LGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEE 228
Query: 353 SRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
R KL L +V ++CGE HTA+++ SG +FT+G G+ G LGH ++ + P
Sbjct: 229 DRESPCHVKL---LRAQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP 285
Query: 413 KEVESLRGLKVKSVACGPWHTAAIV 437
+ V L G +V +ACG HT A V
Sbjct: 286 RRVLELMGSEVTQIACGRQHTLAFV 310
Score = 133 (51.9 bits), Expect = 0.00097, Sum P(3) = 0.00097
Identities = 40/119 (33%), Positives = 59/119 (49%)
Query: 228 VLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWG 287
V G + A +S + + KLL + V IS G +H A++TK G VF +G
Sbjct: 211 VFGWGMNNAGQLGLSDEEDRESPCHVKLLRAQ---KVVYISCGEEHTAVLTKSGGVFTFG 267
Query: 288 EGKDGRLGH-KVNMDVSCPKLVECLSGINVQSVSCGEFQTCALT-KSGEIYTWGHNNHG 344
G G+LGH +N +V+ +++E L G V ++CG T A SG IY +G G
Sbjct: 268 AGSCGQLGHDSMNDEVNPRRVLE-LMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARG 325
Score = 46 (21.3 bits), Expect = 5.7e-29, Sum P(2) = 5.7e-29
Identities = 13/48 (27%), Positives = 27/48 (56%)
Query: 770 IPKTQMSTHSPLLRKISLGSNFIPIASTVEKDLSESNKMLNEEVQRLR 817
IP M++ +++ + G +++P+A T +L + K ++EV R R
Sbjct: 990 IPIYGMASLQIVIQSTASGEDYLPVAHTCY-NLLDLPKYSSKEVLRAR 1036
Score = 42 (19.8 bits), Expect = 0.00097, Sum P(3) = 0.00097
Identities = 13/48 (27%), Positives = 23/48 (47%)
Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESL 418
V +++ GEW+TA + G V G G + + QP E+ ++
Sbjct: 897 VFQISVGEWYTA----------FSSGFLKVCG-GKVLELFQPSELRAM 933
>RGD|1561739 [details] [associations]
symbol:Herc6 "HECT and RLD domain containing E3 ubiquitin
protein ligase family member 6" species:10116 "Rattus norvegicus"
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 RGD:1561739 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204 eggNOG:COG5021
HOGENOM:HOG000208452 HOVERGEN:HBG050878 OrthoDB:EOG4N30N6
IPI:IPI00553869 EMBL:BC085921 UniGene:Rn.107120
ProteinModelPortal:Q5U2P8 PhosphoSite:Q5U2P8 UCSC:RGD:1561739
InParanoid:Q5U2P8 ArrayExpress:Q5U2P8 Genevestigator:Q5U2P8
Uniprot:Q5U2P8
Length = 1034
Score = 354 (129.7 bits), Expect = 9.8e-29, Sum P(2) = 9.8e-29
Identities = 95/316 (30%), Positives = 164/316 (51%)
Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
P+ LE+ L + + G +H+ L+ V+ G+ G+LG K P+ ++ LS
Sbjct: 19 PRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEPIQALS 78
Query: 313 GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVS 372
+++ VSCG+ + A+ G ++TWG + G +GE + S ++P K+ ++L G+++
Sbjct: 79 TVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEIS-FMPTKI-NSLAGIKII 136
Query: 373 KVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGN-LQNVSQPKEVESLRGLKVKSVACGPW 431
+V+CG +H+ +S GQ+F++G G LG GN L + + P++V+SL G+ + VA G
Sbjct: 137 QVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGT 196
Query: 432 HTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRL---GHVDGERKLLPTCVTRLVDFDFVQ 488
H+ A+ +M G F WG+ G+L G+ E+ P + L + V
Sbjct: 197 HSFAL-SLM----------GTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVY 245
Query: 489 ASCGRMLTVGLTGLGKVYTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGISSGSYH 547
SCG T LT G+V+T G + QL + P++ ++EG V I GSYH
Sbjct: 246 ISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRSGRGGPQLIEGI--GGHVSQIECGSYH 303
Query: 548 -VAVLTSGGSVYTWGK 562
+A + + G V + G+
Sbjct: 304 TIAYVYTTGQVVSLGR 319
Score = 298 (110.0 bits), Expect = 1.2e-22, Sum P(2) = 1.2e-22
Identities = 92/322 (28%), Positives = 154/322 (47%)
Query: 305 PKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFD 364
P+ +E +G+ + + GE + L + +Y+ G N+ G +G++ +S P +
Sbjct: 19 PRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQ--LGQKSPQSTKRPEPI-Q 75
Query: 365 TLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVS-QPKEVESLRGLKV 423
L V + V+CG+ H+ V G++FT+G G+ G LG G + +S P ++ SL G+K+
Sbjct: 76 ALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGIKI 135
Query: 424 KSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGE-RKLLPTCVTRLV 482
V+CG +H+ A+ + G++F+WG +G+LG + + P V L
Sbjct: 136 IQVSCGHYHSLALSE-----------DGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLE 184
Query: 483 DFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL---GNPKAKDRSITVVE-GKLKEEFV 538
Q + G + L+ +G + G+ GQL GN AK++ G LK V
Sbjct: 185 GIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGN-SAKEQIYKPHSIGALKTLNV 243
Query: 539 KGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSS 598
IS G H +VLT G V+T+G +++ QL R P +E + V + CGS
Sbjct: 244 VYISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRSGRGGPQLIEGIGGH-VSQIECGSY 302
Query: 599 ITAAICLHKS--ISVGDQSSCS 618
T A +S+G SC+
Sbjct: 303 HTIAYVYTTGQVVSLGRGPSCT 324
Score = 248 (92.4 bits), Expect = 3.0e-17, Sum P(2) = 3.0e-17
Identities = 56/206 (27%), Positives = 102/206 (49%)
Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
G +G + +++ + +P + S + + +S G H+ ++++G+VF WG + G+
Sbjct: 105 GAGSEGQLGIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQ 164
Query: 294 LGHKVNM-DVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGA-DLVGER 351
LG N+ + P+ V+ L GI + V+ G + AL+ G + WG+N G L G
Sbjct: 165 LGLGNNLCSQASPQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGNS 224
Query: 352 RSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQ 411
+ P + L + V ++CG HT++++ GQ+FT+G + L H
Sbjct: 225 AKEQIYKPHSI-GALKTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRSGRGG 283
Query: 412 PKEVESLRGLKVKSVACGPWHTAAIV 437
P+ +E + G V + CG +HT A V
Sbjct: 284 PQLIEGIGG-HVSQIECGSYHTIAYV 308
Score = 200 (75.5 bits), Expect = 4.1e-12, Sum P(2) = 4.1e-12
Identities = 59/200 (29%), Positives = 100/200 (50%)
Query: 411 QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGE 470
QP+ +E+ GLK+ A G H+ + SN ++++ GD +G+LG +
Sbjct: 18 QPRRLEAGTGLKLLKAASGERHSLLLF--------SNH---RVYSCGDNSRGQLGQKSPQ 66
Query: 471 RKLLPTCVTRL--VDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSI-- 526
P + L V D V SCG+ +V + G+V+T G+ GQLG ++K+ S
Sbjct: 67 STKRPEPIQALSTVHIDLV--SCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMP 124
Query: 527 TVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQ-ERETPTFVEAL 585
T + + ++ +S G YH L+ G V++WG N GQLGLG++ + +P V++L
Sbjct: 125 TKINSLAGIKIIQ-VSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSL 183
Query: 586 RDRQVESVVCGSSITAAICL 605
+ V G + + A+ L
Sbjct: 184 EGIPLAQVAAGGTHSFALSL 203
Score = 55 (24.4 bits), Expect = 9.8e-29, Sum P(2) = 9.8e-29
Identities = 16/71 (22%), Positives = 37/71 (52%)
Query: 773 TQMSTHSPLLRKISLGSNFIPIASTVEKDLSESNKMLNEEVQRLRDQARNLEKQCQIGNQ 832
+Q+ P+++ S + + V+K L ++N L+ EV ++ D + NL+ ++ +
Sbjct: 546 SQLHNEVPMMKDTSNLKVSLEMMKEVQKILEKTNSHLHNEVPKMEDTS-NLKVLLEV-MK 603
Query: 833 KVQECQQKIEE 843
+V E ++ E
Sbjct: 604 EVHEANCQLPE 614
>UNIPROTKB|F1N7C1 [details] [associations]
symbol:HERC6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
OMA:HIFAGTY EMBL:DAAA02017014 IPI:IPI00825680 UniGene:Bt.42179
Ensembl:ENSBTAT00000027362 NextBio:20874614 Uniprot:F1N7C1
Length = 1016
Score = 356 (130.4 bits), Expect = 1.1e-28, P = 1.1e-28
Identities = 101/338 (29%), Positives = 167/338 (49%)
Query: 270 GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCAL 329
G H+ L+ +G V G+ G+LG K P+ + L +NV VSCG+ + A+
Sbjct: 31 GEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETLNVALVSCGKEHSLAV 90
Query: 330 TKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQ 389
G ++ WG + G +GE + + ++P+K+ TL G+++ +VACG +H+ +S GQ
Sbjct: 91 CHKGRVFAWGAASEGQLGIGEFKETT-FIPKKI-KTLAGIKIIQVACGHYHSVALSEDGQ 148
Query: 390 LFTYGDGTFGVLGHGN-LQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNA 448
+F++G + G LG G + + P+ V SL G+ + VA G H+ A+ +
Sbjct: 149 VFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFAL-----------S 197
Query: 449 IGGKLFTWGDADKGRL---GHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKV 505
+ G F WG G+L G+ ++ P + L V SCG T LT GKV
Sbjct: 198 LSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKV 257
Query: 506 YTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWGKN 563
+T G +GQLG+ P A+ R +VE ++ E V I GS H +A + + G V ++G+
Sbjct: 258 FTFGDNSYGQLGHDPTAEKRGPQLVE-RI-EGLVSQIDCGSDHTLAYIYTTGQVVSFGRG 315
Query: 564 AN--GQLGLGDSQERETPTFVEA--LRDRQVESVVCGS 597
+ ++ + V A L D QV+ + G+
Sbjct: 316 PGCASRSPHPGAESSDISCLVSAKDLADVQVKHIFAGT 353
Score = 327 (120.2 bits), Expect = 1.5e-25, P = 1.5e-25
Identities = 96/310 (30%), Positives = 157/310 (50%)
Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG-HKVNMDVSCPKLVECL 311
P+ + + L+V +S G +H+ V +G VF WG +G+LG + PK ++ L
Sbjct: 66 PERIPALETLNVALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTL 125
Query: 312 SGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRV 371
+GI + V+CG + + AL++ G++++WG N+HG +G + S P+++ +L+G+ +
Sbjct: 126 AGIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGLG-KEFPSQASPQRV-RSLEGIPL 183
Query: 372 SKVACGEWHTAIVSTSGQLFTYGDGTFGVLG-HGNLQNVSQ--PKEVESLRGLKVKSVAC 428
++VA G H+ +S SG F +G + G L GN V + P + +L+ L V S++C
Sbjct: 184 AQVAAGGHHSFALSLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISC 243
Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ 488
G HTA + D GK+FT+GD G+LGH K P V R+ Q
Sbjct: 244 GYKHTAVLTQ---D--------GKVFTFGDNSYGQLGHDPTAEKRGPQLVERIEGL-VSQ 291
Query: 489 ASCGRMLTVGL---TGLGKVYTMGSAVHGQLGNPKAKDRSIT-VVEGK-LKEEFVKGISS 543
CG T+ TG + G + +P A+ I+ +V K L + VK I +
Sbjct: 292 IDCGSDHTLAYIYTTGQVVSFGRGPGCASRSPHPGAESSDISCLVSAKDLADVQVKHIFA 351
Query: 544 GSYHVAVLTS 553
G+Y V TS
Sbjct: 352 GTYANFVTTS 361
Score = 310 (114.2 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 95/321 (29%), Positives = 148/321 (46%)
Query: 310 CLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGV 369
C G + + GE + L G + + G N+ G +G + + P ++ L+ +
Sbjct: 19 CAGGNTLLQAASGEHHSLLLLSDGTVQSCGDNSRGQ--LGRKGTPRGEQPERI-PALETL 75
Query: 370 RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQ-PKEVESLRGLKVKSVAC 428
V+ V+CG+ H+ V G++F +G + G LG G + + PK++++L G+K+ VAC
Sbjct: 76 NVALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVAC 135
Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG-HVDGERKLLPTCVTRLVDFDFV 487
G +H+ A+ + G++F+WG G+LG + + P V L
Sbjct: 136 GHYHSVALSE-----------DGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLA 184
Query: 488 QASCGRMLTVGLTGLGKVYTMGSAVHGQL---GNPKAKDRSITVVEGKLKEEFVKGISSG 544
Q + G + L+ G + GS GQL GN R V G LK V IS G
Sbjct: 185 QVAAGGHHSFALSLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCG 244
Query: 545 SYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAIC 604
H AVLT G V+T+G N+ GQLG + E+ P VE + + V + CGS T A
Sbjct: 245 YKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKRGPQLVERI-EGLVSQIDCGSDHTLAYI 303
Query: 605 LHKS--ISVGDQSSCSQCRMP 623
+S G C+ R P
Sbjct: 304 YTTGQVVSFGRGPGCAS-RSP 323
Score = 269 (99.8 bits), Expect = 2.8e-19, P = 2.8e-19
Identities = 61/206 (29%), Positives = 105/206 (50%)
Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
G A +G + + + +PK +++ + + ++ G H+ ++++G+VF WG G+
Sbjct: 100 GAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQ 159
Query: 294 LG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGA-DLVGER 351
LG K + P+ V L GI + V+ G + AL+ SG + WG N+ G L G
Sbjct: 160 LGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNSAGQLALSGNN 219
Query: 352 RSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQ 411
+ P + L + V ++CG HTA+++ G++FT+GD ++G LGH
Sbjct: 220 APVQRYKPVSI-GALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKRG 278
Query: 412 PKEVESLRGLKVKSVACGPWHTAAIV 437
P+ VE + GL V + CG HT A +
Sbjct: 279 PQLVERIEGL-VSQIDCGSDHTLAYI 303
Score = 147 (56.8 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 33/101 (32%), Positives = 57/101 (56%)
Query: 240 SVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVN 299
++S N V P + + L V +IS G KH A++T++G+VF +G+ G+LGH
Sbjct: 214 ALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPT 273
Query: 300 MDVSCPKLVECLSGINVQSVSCGEFQTCA-LTKSGEIYTWG 339
+ P+LVE + G+ V + CG T A + +G++ ++G
Sbjct: 274 AEKRGPQLVERIEGL-VSQIDCGSDHTLAYIYTTGQVVSFG 313
>UNIPROTKB|F1NCH3 [details] [associations]
symbol:HERC4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
OMA:KLVIQPT EMBL:AADN02028016 IPI:IPI00586918
Ensembl:ENSGALT00000006135 ArrayExpress:F1NCH3 Uniprot:F1NCH3
Length = 1048
Score = 369 (135.0 bits), Expect = 1.8e-28, Sum P(2) = 1.8e-28
Identities = 102/356 (28%), Positives = 164/356 (46%)
Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
++++ G +H V +G V+ G G+LGH+ P+ V L N+ +VSCGE
Sbjct: 36 IRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKAR--KRPEHVGALDAQNIVAVSCGE 93
Query: 324 FQTCALTKSGEIYTWGHNNHGA-DLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTA 382
T AL G++Y WG G L G +PR + +L +++ +VACG +H+
Sbjct: 94 AHTLALNDKGQVYAWGLATDGQLGLPGTEECIR--VPRNI-KSLSEIQIVQVACGYYHSL 150
Query: 383 IVSTSGQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMV 441
+S ++F++G +G LG G + + P ++SL G+ +A G H+ +
Sbjct: 151 ALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLT---- 206
Query: 442 DRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTG 501
+ G +F WG G+LG D + +PT + L V CG T LT
Sbjct: 207 -------LSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAALTK 259
Query: 502 LGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHV-AVLTSGGSVYTW 560
G V+T G+ +GQLG+ +L V I+ G H A + S G +Y++
Sbjct: 260 EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSLVTQITCGRQHTTAFVPSSGRIYSF 319
Query: 561 GKNANGQLGLGDSQERETPTFVEA-LRDRQVESVVCGSSITAAICLHKSISVGDQS 615
G NGQLG G + R++P V+ + ++ S C+ + S GDQS
Sbjct: 320 GLGGNGQLGTGTTSNRKSPFTVKGNWLPYSTQCLIPADS-EQYYCVKRIFSGGDQS 374
Score = 327 (120.2 bits), Expect = 9.8e-24, Sum P(3) = 9.8e-24
Identities = 91/324 (28%), Positives = 149/324 (45%)
Query: 283 VFCWGEGKDGRLG-HKVNMDVSC-PKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
+ CWG G+LG ++ ++ P+ + ++ V CG T + G +YT G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
N+ G +G ++R P + LD + V+CGE HT ++ GQ++ +G T G
Sbjct: 61 NDLGQ--LGHEKARKR--PEHV-GALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQ 115
Query: 401 LG-HGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
LG G + + P+ ++SL +++ VACG +H+ A+ + G ++F+WG
Sbjct: 116 LGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLAL-----------SKGSEVFSWGQN 164
Query: 460 DKGRLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
G+LG + +++ P + L+ F Q + G + LT G ++ G GQLG
Sbjct: 165 KYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET 578
DR + + L+ + V I G H A LT G V+T+G GQLG +
Sbjct: 225 NDDNDRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN 284
Query: 579 PTFVEALRDRQVESVVCGSSITAA 602
P V L V + CG T A
Sbjct: 285 PRKVFELMGSLVTQITCGRQHTTA 308
Score = 312 (114.9 bits), Expect = 4.2e-22, Sum P(3) = 4.2e-22
Identities = 85/269 (31%), Positives = 132/269 (49%)
Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
WG+ + G +G PRK D R+ V CG HT V G ++T G
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKS-DFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGCND 62
Query: 398 FGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
G LGH + +P+ V +L + +V+CG HT A+ D G+++ WG
Sbjct: 63 LGQLGHEKARK--RPEHVGALDAQNIVAVSCGEAHTLALND-----------KGQVYAWG 109
Query: 458 DADKGRLGHVDGERKL-LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
A G+LG E + +P + L + VQ +CG ++ L+ +V++ G +GQL
Sbjct: 110 LATDGQLGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQL 169
Query: 517 G--NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQ 574
G K S V++ L F + I++G H VLT G+++ WG+N GQLGL D
Sbjct: 170 GLGYEYKKQNSPHVIKSLLGIPFAQ-IAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDN 228
Query: 575 ERETPTFVEALRDRQVESVVCGSSITAAI 603
+R PT +++LR ++V + CG TAA+
Sbjct: 229 DRYVPTLLKSLRTQKVVHICCGEDHTAAL 257
Score = 286 (105.7 bits), Expect = 1.9e-19, Sum P(2) = 1.9e-19
Identities = 80/269 (29%), Positives = 128/269 (47%)
Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
G A DG + T+ +P+ ++S + + ++ G H+ ++K EVF WG+ K G+
Sbjct: 109 GLATDGQLGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQ 168
Query: 294 LG--HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER 351
LG ++ S P +++ L GI ++ G + LT SG I+ WG N G +G
Sbjct: 169 LGLGYEYKKQNS-PHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQ--LGLN 225
Query: 352 RSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQ 411
++P L +L +V + CGE HTA ++ G +FT+G G +G LGH + +
Sbjct: 226 DDNDRYVPT-LLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN 284
Query: 412 PKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG--KLFTWGDADKGRLGHVDG 469
P++V L G V + CG HT A V R S +GG +L T +++ V G
Sbjct: 285 PRKVFELMGSLVTQITCGRQHTTAFVPSS-GRIYSFGLGGNGQLGTGTTSNRKSPFTVKG 343
Query: 470 ERKLLPTCVTRLVDFDFVQASCGRMLTVG 498
LP L+ D Q C + + G
Sbjct: 344 N--WLPYSTQCLIPADSEQYYCVKRIFSG 370
Score = 194 (73.4 bits), Expect = 1.8e-09, Sum P(3) = 1.8e-09
Identities = 57/183 (31%), Positives = 83/183 (45%)
Query: 453 LFTWGDADKGRLG--HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
+ WG+A G+LG +D E L P ++ CG TV + G VYT G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 511 AVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGL 570
GQLG+ KA+ R V G L + + +S G H L G VY WG +GQLGL
Sbjct: 61 NDLGQLGHEKARKRPEHV--GALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGL 118
Query: 571 GDSQER-ETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRK 629
++E P +++L + Q+ V CG + A+ + Q+ Q + G+ K
Sbjct: 119 PGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQ--LGLGYEYK 176
Query: 630 KHN 632
K N
Sbjct: 177 KQN 179
Score = 45 (20.9 bits), Expect = 9.8e-24, Sum P(3) = 9.8e-24
Identities = 10/35 (28%), Positives = 19/35 (54%)
Query: 688 SPRNLLNLQGSLSEEV---KEEKGALTPSRGQSFT 719
+PR + L GSL ++ ++ A PS G+ ++
Sbjct: 284 NPRKVFELMGSLVTQITCGRQHTTAFVPSSGRIYS 318
Score = 37 (18.1 bits), Expect = 1.8e-28, Sum P(2) = 1.8e-28
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 1005 EENQVVVYQKYGIEEYSNL 1023
E QV+ Y ++ I E +L
Sbjct: 605 ERGQVIQYDRFYIHEIQDL 623
>TAIR|locus:504956339 [details] [associations]
symbol:RUG1 "AT5G08710" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002688
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
EMBL:BT005498 EMBL:AK118882 IPI:IPI00533904 RefSeq:NP_680156.2
UniGene:At.45869 ProteinModelPortal:Q8GWF2 SMR:Q8GWF2 PRIDE:Q8GWF2
EnsemblPlants:AT5G08710.1 GeneID:830771 KEGG:ath:AT5G08710
TAIR:At5g08710 HOGENOM:HOG000006005 InParanoid:Q8GWF2 OMA:HSACIDE
PhylomeDB:Q8GWF2 ProtClustDB:CLSN2690903 Genevestigator:Q8GWF2
Uniprot:Q8GWF2
Length = 434
Score = 326 (119.8 bits), Expect = 3.4e-28, P = 3.4e-28
Identities = 98/362 (27%), Positives = 165/362 (45%)
Query: 258 SAVMLDVQNISLGAKHAALVTKE-GEVFC--WGEGKDGRLGHKVNMDVS-CPKLVECLSG 313
S ++ D + +G + V+ E G+ F WG G GRLG N+D P + LS
Sbjct: 23 SGLLKDSKLGPIGVCCSRWVSSESGKRFAAMWGSGDYGRLGLG-NLDSQWTPAVCSALSD 81
Query: 314 INVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSK 373
++ +V+CG T LT++ ++ G N+ G +G +SH + LD +
Sbjct: 82 HSITAVACGGAHTLFLTETRRVFATGLNDCGQ--LGVSDVKSHAMDPLEVSGLDK-DILH 138
Query: 374 VACGEWHTAIVSTSGQLFTYGDGTFGVLGHGN--LQNVSQPKEVESLRGLKVKSVACGPW 431
++ G +H+A ++ G+L+ +G + G LG G + V P +VE+L G+ ++SVA G
Sbjct: 139 ISAGYYHSAAITVDGELYMWGKNSSGQLGLGKKAARVVRVPTKVEALHGITIQSVALGSE 198
Query: 432 HTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGH---------VDGERKLLPTCVTRLV 482
H+ A+ D GG++ +WG GRLGH + + P + L
Sbjct: 199 HSVAVTD-----------GGEVLSWGGGGSGRLGHGHQSSLFGILRSNSEFTPRLIKELE 247
Query: 483 DFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGIS 542
+ G + + G + G ++G ++ + + ++ + + ++
Sbjct: 248 GIKVTNVAAGLLHSACTDENGSAFMFGEKSINKMGFGGVRNATTPSIISEVP--YAEEVA 305
Query: 543 SGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEA-LRDRQVESVVCGSSITA 601
G YH V+T GG +YTWG N NG LG + +P VE + V V CG TA
Sbjct: 306 CGGYHTCVVTRGGELYTWGSNENGCLGTDSTYVSHSPVRVEGPFLESTVSQVSCGWKHTA 365
Query: 602 AI 603
AI
Sbjct: 366 AI 367
Score = 325 (119.5 bits), Expect = 4.4e-28, P = 4.4e-28
Identities = 101/363 (27%), Positives = 168/363 (46%)
Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQ 325
++ G H +T+ VF G G+LG V P V L ++ +S G +
Sbjct: 87 VACGGAHTLFLTETRRVFATGLNDCGQLGVSDVKSHAMDPLEVSGLDK-DILHISAGYYH 145
Query: 326 TCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVS 385
+ A+T GE+Y WG N+ G +G++ +R +P K+ + L G+ + VA G H+ V+
Sbjct: 146 SAAITVDGELYMWGKNSSGQLGLGKKAARVVRVPTKV-EALHGITIQSVALGSEHSVAVT 204
Query: 386 TSGQLFTYGDGTFGVLGHGN-------LQNVSQ--PKEVESLRGLKVKSVACGPWHTAAI 436
G++ ++G G G LGHG+ L++ S+ P+ ++ L G+KV +VA G H+A
Sbjct: 205 DGGEVLSWGGGGSGRLGHGHQSSLFGILRSNSEFTPRLIKELEGIKVTNVAAGLLHSA-- 262
Query: 437 VDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLT 496
C G F +G+ ++G P+ ++ + + + +CG T
Sbjct: 263 -------CTDE--NGSAFMFGEKSINKMGFGGVRNATTPSIISEVPYAE--EVACGGYHT 311
Query: 497 VGLTGLGKVYTMGSAVHGQLGNPKAK-DRSITVVEGKLKEEFVKGISSGSYHVAVLTSGG 555
+T G++YT GS +G LG S VEG E V +S G H A + S
Sbjct: 312 CVVTRGGELYTWGSNENGCLGTDSTYVSHSPVRVEGPFLESTVSQVSCGWKHTAAI-SDN 370
Query: 556 SVYTWG------------KNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
+V+TWG ++ GQLG G + P V+ ++ + + CG + TAA+
Sbjct: 371 NVFTWGWGGSHGTFSVDGHSSGGQLGHGSDVDYARPAMVDLGKNVRAVHISCGFNHTAAV 430
Query: 604 CLH 606
H
Sbjct: 431 LEH 433
Score = 247 (92.0 bits), Expect = 9.6e-18, P = 9.6e-18
Identities = 67/231 (29%), Positives = 115/231 (49%)
Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
+V+ WG G G +G S+ P+L++ + V N++ G H+A +
Sbjct: 208 EVLSWGGGG-SGRLGHGHQSSLFGILRSNSEFTPRLIKELEGIKVTNVAAGLLHSACTDE 266
Query: 280 EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
G F +GE ++G + + P ++ + + V+CG + TC +T+ GE+YTWG
Sbjct: 267 NGSAFMFGEKSINKMGFGGVRNATTPSIISEVP--YAEEVACGGYHTCVVTRGGELYTWG 324
Query: 340 HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYG----D 395
N +G L + SH R L+ VS+V+CG HTA +S + +FT+G
Sbjct: 325 SNENGC-LGTDSTYVSHSPVRVEGPFLEST-VSQVSCGWKHTAAISDNN-VFTWGWGGSH 381
Query: 396 GTFGV--------LGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVD 438
GTF V LGHG+ + ++P V+ + ++ ++CG HTAA+++
Sbjct: 382 GTFSVDGHSSGGQLGHGSDVDYARPAMVDLGKNVRAVHISCGFNHTAAVLE 432
Score = 243 (90.6 bits), Expect = 2.7e-17, P = 2.7e-17
Identities = 81/285 (28%), Positives = 128/285 (44%)
Query: 220 DVMIWGEGVLGGDIG-GAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVT 278
++ +WG+ G +G G V + T+V+AL + +Q+++LG++H+ VT
Sbjct: 154 ELYMWGKNS-SGQLGLGKKAARVVRVPTKVEALHG--------ITIQSVALGSEHSVAVT 204
Query: 279 KEGEVFCWGEGKDGRLGH----------KVNMDVSCPKLVECLSGINVQSVSCGEFQTCA 328
GEV WG G GRLGH + N + + P+L++ L GI V +V+ G +
Sbjct: 205 DGGEVLSWGGGGSGRLGHGHQSSLFGILRSNSEFT-PRLIKELEGIKVTNVAAGLLHSAC 263
Query: 329 LTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSG 388
++G + +G + + +G R+ P + + +VACG +HT +V+ G
Sbjct: 264 TDENGSAFMFGEKS--INKMGFGGVRNATTPSIISEV---PYAEEVACGGYHTCVVTRGG 318
Query: 389 QLFTYGDGTFGVLGHGNLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCKSN 447
+L+T+G G LG + P VE V V+CG HTAAI D V
Sbjct: 319 ELYTWGSNENGCLGTDSTYVSHSPVRVEGPFLESTVSQVSCGWKHTAAISDNNVFTWGWG 378
Query: 448 AIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCG 492
G G + G+LGH P V + V SCG
Sbjct: 379 GSHGTFSVDGHSSGGQLGHGSDVDYARPAMVDLGKNVRAVHISCG 423
>ZFIN|ZDB-GENE-090313-139 [details] [associations]
symbol:herc3 "hect domain and RLD 3" species:7955
"Danio rerio" [GO:0006464 "cellular protein modification process"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-090313-139
GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00660000095216 CTD:8916 HOGENOM:HOG000208452
HOVERGEN:HBG050878 OMA:SPAVDFR OrthoDB:EOG4RBQHS EMBL:CU467858
IPI:IPI00901161 RefSeq:NP_001139096.1 UniGene:Dr.86009
Ensembl:ENSDART00000112994 Ensembl:ENSDART00000141977
GeneID:100003587 NextBio:20785898 Uniprot:B8JLD4
Length = 1046
Score = 351 (128.6 bits), Expect = 4.1e-28, P = 4.1e-28
Identities = 93/325 (28%), Positives = 157/325 (48%)
Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
++ ++ G +H+ + +G V+ G G+LGH + S P+LV L + VSCG+
Sbjct: 36 LKEVACGNQHSLFLLHDGSVYTCGSNSCGQLGH--DKGGSRPELVGALDAQKISGVSCGQ 93
Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
+ A+ + G+++ WG + G +G +PR L L R+S+V CG H
Sbjct: 94 AHSLAVNEQGQVFAWGAGDGGQLGLGTAEEAVR-VPR-LIKKLCEHRISQVMCGNHHCIA 151
Query: 384 VSTSGQLFTYGDGTFGVLGHGNLQ-NVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
+S GQLF +G+ + G LG G + + P+ ++SL G+ + ++ G H+ A+
Sbjct: 152 LSKDGQLFVWGENSSGQLGLGKGEPSTLSPQPLKSLCGIPLTQISAGGDHSFAL------ 205
Query: 443 RCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGL 502
+ G +F WG G+LG D + + +P + L V SCG T LT
Sbjct: 206 -----SFSGAVFGWGKNSAGQLGLNDEQDRAVPCHIKFLRSQKVVYISCGEEHTAALTKE 260
Query: 503 GKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWG 561
G ++T G+ GQLG+ ++ + +L V I+ G H +A + S G +Y +G
Sbjct: 261 GGLFTFGNGSKGQLGHDSTRNEPLPRRVMELMGTEVSQIACGRNHTLAFVPSTGLIYAFG 320
Query: 562 KNANGQLGLGDSQERETPTFVEALR 586
N GQLG G ++P V ++
Sbjct: 321 CNTQGQLGTGIRGSAKSPVPVSNIQ 345
Score = 344 (126.2 bits), Expect = 2.3e-27, P = 2.3e-27
Identities = 98/323 (30%), Positives = 148/323 (45%)
Query: 283 VFCWGEGKDGRLGHKVN-MDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
+ CWG G+LG + V P+ G ++ V+CG + L G +YT G N
Sbjct: 2 MLCWGSSGAGQLGIGASEASVFEPRSCCVFDGRGLKEVACGNQHSLFLLHDGSVYTCGSN 61
Query: 342 NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVL 401
+ G +G + S P +L LD ++S V+CG+ H+ V+ GQ+F +G G G L
Sbjct: 62 SCGQ--LGHDKGGSR--P-ELVGALDAQKISGVSCGQAHSLAVNEQGQVFAWGAGDGGQL 116
Query: 402 GHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDAD 460
G G + V P+ ++ L ++ V CG H A+ + G+LF WG+
Sbjct: 117 GLGTAEEAVRVPRLIKKLCEHRISQVMCGNHHCIAL-----------SKDGQLFVWGENS 165
Query: 461 KGRLGHVDGERKLL-PTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNP 519
G+LG GE L P + L Q S G + L+ G V+ G GQLG
Sbjct: 166 SGQLGLGKGEPSTLSPQPLKSLCGIPLTQISAGGDHSFALSFSGAVFGWGKNSAGQLGLN 225
Query: 520 KAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETP 579
+DR++ L+ + V IS G H A LT G ++T+G + GQLG ++ P
Sbjct: 226 DEQDRAVPCHIKFLRSQKVVYISCGEEHTAALTKEGGLFTFGNGSKGQLGHDSTRNEPLP 285
Query: 580 TFVEALRDRQVESVVCGSSITAA 602
V L +V + CG + T A
Sbjct: 286 RRVMELMGTEVSQIACGRNHTLA 308
Score = 341 (125.1 bits), Expect = 5.0e-27, P = 5.0e-27
Identities = 86/267 (32%), Positives = 138/267 (51%)
Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMD-VSCPKLVECL 311
P+L+ + + +S G H+ V ++G+VF WG G G+LG + V P+L++ L
Sbjct: 75 PELVGALDAQKISGVSCGQAHSLAVNEQGQVFAWGAGDGGQLGLGTAEEAVRVPRLIKKL 134
Query: 312 SGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRV 371
+ V CG AL+K G+++ WG N+ G +G+ S P+ L +L G+ +
Sbjct: 135 CEHRISQVMCGNHHCIALSKDGQLFVWGENSSGQLGLGKGEP-STLSPQPL-KSLCGIPL 192
Query: 372 SKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPW 431
++++ G H+ +S SG +F +G + G LG + Q+ + P ++ LR KV ++CG
Sbjct: 193 TQISAGGDHSFALSFSGAVFGWGKNSAGQLGLNDEQDRAVPCHIKFLRSQKVVYISCGEE 252
Query: 432 HTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASC 491
HTAA+ K GG LFT+G+ KG+LGH + LP V L+ + Q +C
Sbjct: 253 HTAALT-------KE---GG-LFTFGNGSKGQLGHDSTRNEPLPRRVMELMGTEVSQIAC 301
Query: 492 GRMLTVGLT-GLGKVYTMGSAVHGQLG 517
GR T+ G +Y G GQLG
Sbjct: 302 GRNHTLAFVPSTGLIYAFGCNTQGQLG 328
Score = 313 (115.2 bits), Expect = 5.2e-24, P = 5.2e-24
Identities = 83/268 (30%), Positives = 133/268 (49%)
Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
WG + G +G + S + PR DG + +VACG H+ + G ++T G +
Sbjct: 5 WGSSGAGQLGIGASEA-SVFEPRSCC-VFDGRGLKEVACGNQHSLFLLHDGSVYTCGSNS 62
Query: 398 FGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
G LGH + S+P+ V +L K+ V+CG H+ A+ + G++F WG
Sbjct: 63 CGQLGHD--KGGSRPELVGALDAQKISGVSCGQAHSLAVNE-----------QGQVFAWG 109
Query: 458 DADKGRLGHVDGERKL-LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
D G+LG E + +P + +L + Q CG + L+ G+++ G GQL
Sbjct: 110 AGDGGQLGLGTAEEAVRVPRLIKKLCEHRISQVMCGNHHCIALSKDGQLFVWGENSSGQL 169
Query: 517 GNPKAKDRSITVVEGK-LKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQE 575
G K + +++ K L + IS+G H L+ G+V+ WGKN+ GQLGL D Q+
Sbjct: 170 GLGKGEPSTLSPQPLKSLCGIPLTQISAGGDHSFALSFSGAVFGWGKNSAGQLGLNDEQD 229
Query: 576 RETPTFVEALRDRQVESVVCGSSITAAI 603
R P ++ LR ++V + CG TAA+
Sbjct: 230 RAVPCHIKFLRSQKVVYISCGEEHTAAL 257
Score = 293 (108.2 bits), Expect = 7.6e-22, P = 7.6e-22
Identities = 73/219 (33%), Positives = 115/219 (52%)
Query: 221 VMIWGEGVLGGDIG-GAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
V WG G GG +G G + +V +V L+ KL E + + G H ++K
Sbjct: 105 VFAWGAGD-GGQLGLGTAEEAV-----RVPRLIKKLCEHRI----SQVMCGNHHCIALSK 154
Query: 280 EGEVFCWGEGKDGRLG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTW 338
+G++F WGE G+LG K P+ ++ L GI + +S G + AL+ SG ++ W
Sbjct: 155 DGQLFVWGENSSGQLGLGKGEPSTLSPQPLKSLCGIPLTQISAGGDHSFALSFSGAVFGW 214
Query: 339 GHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTF 398
G N+ G + + + R+ +P + L +V ++CGE HTA ++ G LFT+G+G+
Sbjct: 215 GKNSAGQLGLNDEQDRA--VPCHI-KFLRSQKVVYISCGEEHTAALTKEGGLFTFGNGSK 271
Query: 399 GVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
G LGH + +N P+ V L G +V +ACG HT A V
Sbjct: 272 GQLGHDSTRNEPLPRRVMELMGTEVSQIACGRNHTLAFV 310
Score = 254 (94.5 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 60/184 (32%), Positives = 98/184 (53%)
Query: 239 GSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKV 298
G + K + L P+ L+S + + IS G H+ ++ G VF WG+ G+LG
Sbjct: 167 GQLGLGKGEPSTLSPQPLKSLCGIPLTQISAGGDHSFALSFSGAVFGWGKNSAGQLGLND 226
Query: 299 NMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWL 358
D + P ++ L V +SCGE T ALTK G ++T+G+ + G +G +R+ L
Sbjct: 227 EQDRAVPCHIKFLRSQKVVYISCGEEHTAALTKEGGLFTFGNGSKGQ--LGHDSTRNEPL 284
Query: 359 PRKLFDTLDGVRVSKVACGEWHT-AIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVES 417
PR++ + + G VS++ACG HT A V ++G ++ +G T G LG G + P V +
Sbjct: 285 PRRVMELM-GTEVSQIACGRNHTLAFVPSTGLIYAFGCNTQGQLGTGIRGSAKSPVPVSN 343
Query: 418 LRGL 421
++ L
Sbjct: 344 IQPL 347
Score = 191 (72.3 bits), Expect = 7.3e-11, P = 7.3e-11
Identities = 49/169 (28%), Positives = 76/169 (44%)
Query: 453 LFTWGDADKGRLGHVDGERKLL-PTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
+ WG + G+LG E + P + +CG ++ L G VYT GS
Sbjct: 2 MLCWGSSGAGQLGIGASEASVFEPRSCCVFDGRGLKEVACGNQHSLFLLHDGSVYTCGSN 61
Query: 512 VHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLG 571
GQLG+ K R V G L + + G+S G H + G V+ WG GQLGLG
Sbjct: 62 SCGQLGHDKGGSRPELV--GALDAQKISGVSCGQAHSLAVNEQGQVFAWGAGDGGQLGLG 119
Query: 572 DSQER-ETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQ 619
++E P ++ L + ++ V+CG+ A+ + V ++S Q
Sbjct: 120 TAEEAVRVPRLIKKLCEHRISQVMCGNHHCIALSKDGQLFVWGENSSGQ 168
>UNIPROTKB|E2RMB0 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:8916 KO:K10614 OMA:SPAVDFR
EMBL:AAEX03016754 EMBL:AAEX03016753 RefSeq:XP_535653.3
Ensembl:ENSCAFT00000015540 GeneID:478475 KEGG:cfa:478475
Uniprot:E2RMB0
Length = 1050
Score = 364 (133.2 bits), Expect = 6.4e-28, Sum P(2) = 6.4e-28
Identities = 96/322 (29%), Positives = 158/322 (49%)
Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
V+ ++ G H+ + ++GEV+ G G+LGH+ + + P+ + L+ ++ V+CGE
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHE--REGNKPEQIGALADQHIVHVACGE 93
Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
+ AL+ G++++WG + G +G + +L L+ + +V+CG WH
Sbjct: 94 SHSLALSDRGQLFSWGAGSDGQ--LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 384 VSTSGQLFTYGDGTFGVLGHGN-LQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
++ GQ FT+G + G LG G + + P+ V SL G+ + VA G H+ A+
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEYPSQASPQRVRSLEGIPLAQVAAGGAHSFAL------ 205
Query: 443 RCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGL 502
++ G +F WG + G+LG D E + P V L V SCG T LT
Sbjct: 206 -----SLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKS 260
Query: 503 GKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWG 561
G V+T G+ GQLG+ D +L V I+ G H +A + S G +Y +G
Sbjct: 261 GGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFG 320
Query: 562 KNANGQLGLGDSQERETPTFVE 583
A GQLG G + + P+ V+
Sbjct: 321 CGAKGQLGTGHTCNVKCPSPVK 342
Score = 343 (125.8 bits), Expect = 1.3e-25, Sum P(2) = 1.3e-25
Identities = 100/324 (30%), Positives = 149/324 (45%)
Query: 283 VFCWGEGKDGRLGHKVNMD--VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
+ CWG G+ G N+ V+ P++ +S +V+ V+CG + L + GE+YT G
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGL 60
Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
N G +G R + P ++ L + VACGE H+ +S GQLF++G G+ G
Sbjct: 61 NTKGQ--LGHEREGNK--PEQI-GALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQ 115
Query: 401 LGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
LG ++ V+ P+ ++ L + V+CG WH C + A G+ FTWG
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWH-----------CLALAADGQFFTWGKN 164
Query: 460 DKGRLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
G+LG + + P V L Q + G + L+ G V+ G GQLG
Sbjct: 165 SHGQLGLGKEYPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET 578
+DR L+ + V IS G H AVLT G V+T+G + GQLG +
Sbjct: 225 SDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN 284
Query: 579 PTFVEALRDRQVESVVCGSSITAA 602
P V L +V + CG T A
Sbjct: 285 PRRVLELMGSEVTQIACGRQHTLA 308
Score = 308 (113.5 bits), Expect = 7.9e-22, Sum P(2) = 7.9e-22
Identities = 78/251 (31%), Positives = 122/251 (48%)
Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
V +VACG H+ + G+++T G T G LGH N +P+++ +L + VACG
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQHIVHVACGE 93
Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL-LPTCVTRLVDFDFVQA 489
H+ A+ D G+LF+WG G+LG + E + +P + +L +Q
Sbjct: 94 SHSLALSD-----------RGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQV 142
Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEF-VKGISSGSYHV 548
SCG + L G+ +T G HGQLG K + + E + +++G H
Sbjct: 143 SCGNWHCLALAADGQFFTWGKNSHGQLGLGKEYPSQASPQRVRSLEGIPLAQVAAGGAHS 202
Query: 549 AVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKS 608
L+ G+V+ WG N GQLGL D ++RE+P V+ LR ++V + CG TA +
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 262
Query: 609 ISVGDQSSCSQ 619
+ SC Q
Sbjct: 263 VFTFGAGSCGQ 273
Score = 296 (109.3 bits), Expect = 1.6e-20, Sum P(2) = 1.6e-20
Identities = 72/233 (30%), Positives = 114/233 (48%)
Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
G DG + T+ +P+L++ + +S G H + +G+ F WG+ G+
Sbjct: 109 GAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQ 168
Query: 294 LG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR 352
LG K + P+ V L GI + V+ G + AL+ SG ++ WG NN G + +
Sbjct: 169 LGLGKEYPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEE 228
Query: 353 SRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
R KL T +V ++CGE HTA+++ SG +FT+G G+ G LGH ++ + P
Sbjct: 229 DRESPCHVKLLRTQ---KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP 285
Query: 413 KEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG 465
+ V L G +V +ACG HT A V G ++ +G KG+LG
Sbjct: 286 RRVLELMGSEVTQIACGRQHTLAFVPS----------SGLIYAFGCGAKGQLG 328
Score = 37 (18.1 bits), Expect = 6.4e-28, Sum P(2) = 6.4e-28
Identities = 10/44 (22%), Positives = 24/44 (54%)
Query: 770 IPKTQMSTHSPLLRKISLGSNFIPIASTVEKDLSESNKMLNEEV 813
IP M++ +++ + G ++P+A T +L + K ++E+
Sbjct: 990 IPIYGMASLQIVIQSTASGEEYLPVAHTCY-NLLDLPKYSSKEI 1032
>UNIPROTKB|A2VDP7 [details] [associations]
symbol:HERC3 "HERC3 protein" species:9913 "Bos taurus"
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 GeneTree:ENSGT00660000095216 CTD:8916
HOGENOM:HOG000208452 HOVERGEN:HBG050878 KO:K10614 OMA:SPAVDFR
OrthoDB:EOG4RBQHS EMBL:DAAA02017014 EMBL:BC133341 IPI:IPI00710875
RefSeq:NP_001077132.1 UniGene:Bt.85959 Ensembl:ENSBTAT00000013357
GeneID:510924 KEGG:bta:510924 InParanoid:A2VDP7 NextBio:20869685
Uniprot:A2VDP7
Length = 1050
Score = 356 (130.4 bits), Expect = 7.0e-28, Sum P(2) = 7.0e-28
Identities = 97/323 (30%), Positives = 160/323 (49%)
Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
V+ ++ G H+ + ++GEV+ G G+LGH+ + + P+ + L+ ++ V+CGE
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHE--REGNKPEQIGALADQHIVHVACGE 93
Query: 324 FQTCALTKSGEIYTWGHNNHGA-DLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTA 382
+ AL+ G++++WG + G L+ S + +PR L L+ + +V+CG WH
Sbjct: 94 SHSLALSDQGQLFSWGAGSDGQLGLMTIEDSVA--VPR-LIQKLNQQTILQVSCGNWHCL 150
Query: 383 IVSTSGQLFTYGDGTFGVLGHGN-LQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMV 441
++ GQ FT+G + G LG G + + P+ V SL G+ + V G H+ A+
Sbjct: 151 ALAADGQFFTWGRNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVVAGGAHSFAL----- 205
Query: 442 DRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTG 501
++ G +F WG + G+LG D + + P V L V SCG T LT
Sbjct: 206 ------SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTK 259
Query: 502 LGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTW 560
G V+T G+ GQLG+ D +L V I+ G H +A + S G +Y +
Sbjct: 260 SGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319
Query: 561 GKNANGQLGLGDSQERETPTFVE 583
G A GQLG G + + P+ V+
Sbjct: 320 GCGARGQLGTGHTCNVKCPSPVK 342
Score = 345 (126.5 bits), Expect = 1.1e-26, Sum P(2) = 1.1e-26
Identities = 101/324 (31%), Positives = 149/324 (45%)
Query: 283 VFCWGEGKDGRLGHKVNMD--VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
+ CWG G+ G N+ V+ P++ +S +V+ V+CG + L + GE+YT G
Sbjct: 1 MLCWGYWSLGQPGISPNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGV 60
Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
N G +G R + P ++ L + VACGE H+ +S GQLF++G G+ G
Sbjct: 61 NTKGQ--LGHEREGNK--PEQI-GALADQHIVHVACGESHSLALSDQGQLFSWGAGSDGQ 115
Query: 401 LGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
LG +++ V+ P+ ++ L + V+CG WH C + A G+ FTWG
Sbjct: 116 LGLMTIEDSVAVPRLIQKLNQQTILQVSCGNWH-----------CLALAADGQFFTWGRN 164
Query: 460 DKGRLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
G+LG + + P V L Q G + L+ G V+ G GQLG
Sbjct: 165 SHGQLGLGKEFPSQASPQRVRSLEGIPLAQVVAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET 578
KDR L+ + V IS G H AVLT G V+T+G + GQLG +
Sbjct: 225 SDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN 284
Query: 579 PTFVEALRDRQVESVVCGSSITAA 602
P V L +V + CG T A
Sbjct: 285 PRRVLELMGSEVTQIACGRQHTLA 308
Score = 302 (111.4 bits), Expect = 5.1e-22, Sum P(2) = 5.1e-22
Identities = 82/255 (32%), Positives = 126/255 (49%)
Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
V +VACG H+ + G+++T G T G LGH N +P+++ +L + VACG
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGN--KPEQIGALADQHIVHVACGE 93
Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL-LPTCVTRLVDFDFVQA 489
H+ A+ D G+LF+WG G+LG + E + +P + +L +Q
Sbjct: 94 SHSLALSD-----------QGQLFSWGAGSDGQLGLMTIEDSVAVPRLIQKLNQQTILQV 142
Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK-----AKDRSITVVEGKLKEEFVKGISSG 544
SCG + L G+ +T G HGQLG K A + + +EG + V G G
Sbjct: 143 SCGNWHCLALAADGQFFTWGRNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVVAG---G 199
Query: 545 SYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAIC 604
++ A L+ G+V+ WG N GQLGL D ++RE+P V+ LR ++V + CG TA +
Sbjct: 200 AHSFA-LSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Query: 605 LHKSISVGDQSSCSQ 619
+ SC Q
Sbjct: 259 KSGGVFTFGAGSCGQ 273
Score = 284 (105.0 bits), Expect = 4.5e-20, Sum P(2) = 4.5e-20
Identities = 65/205 (31%), Positives = 102/205 (49%)
Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
G DG + + +P+L++ + +S G H + +G+ F WG G+
Sbjct: 109 GAGSDGQLGLMTIEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGRNSHGQ 168
Query: 294 LG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR 352
LG K + P+ V L GI + V G + AL+ SG ++ WG NN G + + +
Sbjct: 169 LGLGKEFPSQASPQRVRSLEGIPLAQVVAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEK 228
Query: 353 SRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
R KL T +V ++CGE HTA+++ SG +FT+G G+ G LGH ++ + P
Sbjct: 229 DRESPCHVKLLRTQ---KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP 285
Query: 413 KEVESLRGLKVKSVACGPWHTAAIV 437
+ V L G +V +ACG HT A V
Sbjct: 286 RRVLELMGSEVTQIACGRQHTLAFV 310
Score = 137 (53.3 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 41/119 (34%), Positives = 59/119 (49%)
Query: 228 VLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWG 287
V G + A +S K + KLL + V IS G +H A++TK G VF +G
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ---KVVYISCGEEHTAVLTKSGGVFTFG 267
Query: 288 EGKDGRLGH-KVNMDVSCPKLVECLSGINVQSVSCGEFQTCALT-KSGEIYTWGHNNHG 344
G G+LGH +N +V+ +++E L G V ++CG T A SG IY +G G
Sbjct: 268 AGSCGQLGHDSMNDEVNPRRVLE-LMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARG 325
Score = 45 (20.9 bits), Expect = 7.0e-28, Sum P(2) = 7.0e-28
Identities = 13/48 (27%), Positives = 26/48 (54%)
Query: 770 IPKTQMSTHSPLLRKISLGSNFIPIASTVEKDLSESNKMLNEEVQRLR 817
IP M++ +++ + G ++P+A T +L + K ++EV R R
Sbjct: 990 IPIYGMASLQIVIQSTASGEEYLPVAHTCY-NLLDLPKYSSKEVLRAR 1036
>UNIPROTKB|Q15034 [details] [associations]
symbol:HERC3 "Probable E3 ubiquitin-protein ligase HERC3"
species:9606 "Homo sapiens" [GO:0016023 "cytoplasmic
membrane-bounded vesicle" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] [GO:0005634
"nucleus" evidence=IBA] [GO:0042787 "protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IBA] [GO:0005737 "cytoplasm" evidence=IDA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0016023 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 EMBL:CH471057 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
SUPFAM:SSF56204 eggNOG:COG5021 EMBL:D25215 EMBL:AK289990
IPI:IPI00014216 RefSeq:NP_001258531.1 RefSeq:NP_055421.1
UniGene:Hs.35804 ProteinModelPortal:Q15034 SMR:Q15034 IntAct:Q15034
MINT:MINT-158126 STRING:Q15034 PhosphoSite:Q15034 DMDM:2495699
PaxDb:Q15034 PRIDE:Q15034 DNASU:8916 Ensembl:ENST00000264345
Ensembl:ENST00000402738 GeneID:8916 KEGG:hsa:8916 UCSC:uc003hrw.1
CTD:8916 GeneCards:GC04P089444 HGNC:HGNC:4876 HPA:HPA039170
MIM:605200 neXtProt:NX_Q15034 PharmGKB:PA29251 HOGENOM:HOG000208452
HOVERGEN:HBG050878 InParanoid:Q15034 KO:K10614 OMA:SPAVDFR
OrthoDB:EOG4RBQHS PhylomeDB:Q15034 ChiTaRS:HERC3 GenomeRNAi:8916
NextBio:33540 ArrayExpress:Q15034 Bgee:Q15034 CleanEx:HS_HERC3
Genevestigator:Q15034 Uniprot:Q15034
Length = 1050
Score = 360 (131.8 bits), Expect = 1.1e-27, Sum P(2) = 1.1e-27
Identities = 95/322 (29%), Positives = 158/322 (49%)
Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
V+ ++ G H+ + ++GEV+ G G+LGH+ + + P+ + L+ ++ V+CGE
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHE--REGNKPEQIGALADQHIIHVACGE 93
Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
+ AL+ G++++WG + G +G + +L L+ + +V+CG WH
Sbjct: 94 SHSLALSDRGQLFSWGAGSDGQ--LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 384 VSTSGQLFTYGDGTFGVLGHGN-LQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
++ GQ FT+G + G LG G + + P+ V SL G+ + VA G H+ A+
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL------ 205
Query: 443 RCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGL 502
++ G +F WG + G+LG D + + P V L V SCG T LT
Sbjct: 206 -----SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKS 260
Query: 503 GKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWG 561
G V+T G+ GQLG+ D +L V I+ G H +A + S G +Y +G
Sbjct: 261 GGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFG 320
Query: 562 KNANGQLGLGDSQERETPTFVE 583
A GQLG G + + P+ V+
Sbjct: 321 CGARGQLGTGHTCNVKCPSPVK 342
Score = 347 (127.2 bits), Expect = 2.8e-26, Sum P(2) = 2.8e-26
Identities = 101/324 (31%), Positives = 149/324 (45%)
Query: 283 VFCWGEGKDGRLGHKVNMD--VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
+ CWG G+ G N+ V+ P++ +S +V+ V+CG + L + GE+YT G
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGL 60
Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
N G +G R + P ++ L + VACGE H+ +S GQLF++G G+ G
Sbjct: 61 NTKGQ--LGHEREGNK--PEQI-GALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQ 115
Query: 401 LGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
LG ++ V+ P+ ++ L + V+CG WH C + A G+ FTWG
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWH-----------CLALAADGQFFTWGKN 164
Query: 460 DKGRLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
G+LG + + P V L Q + G + L+ G V+ G GQLG
Sbjct: 165 SHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET 578
KDR L+ + V IS G H AVLT G V+T+G + GQLG +
Sbjct: 225 SDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN 284
Query: 579 PTFVEALRDRQVESVVCGSSITAA 602
P V L +V + CG T A
Sbjct: 285 PRRVLELMGSEVTQIACGRQHTLA 308
Score = 305 (112.4 bits), Expect = 1.0e-21, Sum P(2) = 1.0e-21
Identities = 78/251 (31%), Positives = 122/251 (48%)
Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
V +VACG H+ + G+++T G T G LGH N +P+++ +L + VACG
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQHIIHVACGE 93
Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL-LPTCVTRLVDFDFVQA 489
H+ A+ D G+LF+WG G+LG + E + +P + +L +Q
Sbjct: 94 SHSLALSD-----------RGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQV 142
Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEF-VKGISSGSYHV 548
SCG + L G+ +T G HGQLG K + + E + +++G H
Sbjct: 143 SCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHS 202
Query: 549 AVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKS 608
L+ G+V+ WG N GQLGL D ++RE+P V+ LR ++V + CG TA +
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 262
Query: 609 ISVGDQSSCSQ 619
+ SC Q
Sbjct: 263 VFTFGAGSCGQ 273
Score = 294 (108.6 bits), Expect = 1.6e-20, Sum P(2) = 1.6e-20
Identities = 66/205 (32%), Positives = 105/205 (51%)
Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
G DG + T+ +P+L++ + +S G H + +G+ F WG+ G+
Sbjct: 109 GAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQ 168
Query: 294 LG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR 352
LG K + P+ V L GI + V+ G + AL+ SG ++ WG NN G + + +
Sbjct: 169 LGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEK 228
Query: 353 SRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
R KL T +V ++CGE HTA+++ SG +FT+G G+ G LGH ++ + P
Sbjct: 229 DRESPCHVKLLRTQ---KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP 285
Query: 413 KEVESLRGLKVKSVACGPWHTAAIV 437
+ V L G +V +ACG HT A V
Sbjct: 286 RRVLELMGSEVTQIACGRQHTLAFV 310
Score = 137 (53.3 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 41/119 (34%), Positives = 59/119 (49%)
Query: 228 VLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWG 287
V G + A +S K + KLL + V IS G +H A++TK G VF +G
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ---KVVYISCGEEHTAVLTKSGGVFTFG 267
Query: 288 EGKDGRLGH-KVNMDVSCPKLVECLSGINVQSVSCGEFQTCALT-KSGEIYTWGHNNHG 344
G G+LGH +N +V+ +++E L G V ++CG T A SG IY +G G
Sbjct: 268 AGSCGQLGHDSMNDEVNPRRVLE-LMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARG 325
Score = 39 (18.8 bits), Expect = 1.1e-27, Sum P(2) = 1.1e-27
Identities = 14/57 (24%), Positives = 28/57 (49%)
Query: 770 IPKTQMSTHSPLLRKISLGSNFIPIASTVEKDLSESNKMLNEEV--QRLRDQARNLE 824
IP M++ +++ + G ++P+A T +L + K ++E+ RL N E
Sbjct: 990 IPIYGMASLQIVIQSTASGEEYLPVAHTCY-NLLDLPKYSSKEILSARLTQALDNYE 1045
>ZFIN|ZDB-GENE-070912-423 [details] [associations]
symbol:rpgra "retinitis pigmentosa GTPase regulator
a" species:7955 "Danio rerio" [GO:0072001 "renal system
development" evidence=IMP] INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-070912-423 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0072001 GeneTree:ENSGT00700000104160 EMBL:BX571713
IPI:IPI00955233 RefSeq:XP_003199276.1 Ensembl:ENSDART00000079095
GeneID:571327 KEGG:dre:571327 CTD:571327 NextBio:20890513
Bgee:F1QV77 Uniprot:F1QV77
Length = 1698
Score = 357 (130.7 bits), Expect = 1.4e-27, Sum P(3) = 1.4e-27
Identities = 102/339 (30%), Positives = 165/339 (48%)
Query: 266 NISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQ 325
+IS G H+A VT++G +F +G+ G+LG ++ V+ P V+ L G QSV+CG
Sbjct: 38 HISCGQSHSAFVTEQGRLFVFGDNNRGQLGLQIKGPVTKPVCVKVLKGERAQSVACGTDH 97
Query: 326 TCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVS 385
T T GEI G N+ G +G + ++L D + ++ G+ +A ++
Sbjct: 98 TLVSTSQGEILAAGGNSDGQLGLGHCNDSISF--QRLRPFCDYAPIKLLSAGDHTSAALT 155
Query: 386 TSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCK 445
G+LF +GD + G LG GN + PKE+ G + V+CG H+A + D
Sbjct: 156 EDGRLFLWGDNSAGQLGFGNDSHALLPKELNM--GQSIHWVSCGYRHSALVTD------- 206
Query: 446 SNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFV-QASCGRMLTVGLTGLGK 504
G ++++G++ GRLG + + + R+ V Q +CG T+ LT +
Sbjct: 207 ----SGDVYSFGESADGRLG-LSAHQLANHSYPQRVESLHSVLQVACGGKHTLALTE-DE 260
Query: 505 VYTMGSAVHGQLGNPK---AKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWG 561
+Y G GQLG D + V G ++ V ++ G H A++T G +YT+G
Sbjct: 261 LYCFGGGEFGQLGLGTLVFVADSPVAV--GHFRKGRVTHVTCGEQHSALITDSGLLYTFG 318
Query: 562 KNANGQLGLGDSQ--ERETPTFVEALRDRQVESVVCGSS 598
+G+LG GD + TPT + + V +V CGSS
Sbjct: 319 DGRHGKLGHGDENFTNQFTPTVCQRFFEYSVMTVACGSS 357
Score = 274 (101.5 bits), Expect = 1.1e-18, Sum P(3) = 1.1e-18
Identities = 77/262 (29%), Positives = 123/262 (46%)
Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
GG DG + +L ++ +S G +A +T++G +F WG+ G+
Sbjct: 111 GGNSDGQLGLGHCNDSISFQRLRPFCDYAPIKLLSAGDHTSAALTEDGRLFLWGDNSAGQ 170
Query: 294 LGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRS 353
LG + PK E G ++ VSCG + +T SG++Y++G + G + +
Sbjct: 171 LGFGNDSHALLPK--ELNMGQSIHWVSCGYRHSALVTDSGDVYSFGESADGRLGLSAHQL 228
Query: 354 RSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQ-P 412
+H P+++ ++L V +VACG HT + T +L+ +G G FG LG G L V+ P
Sbjct: 229 ANHSYPQRV-ESLHSVL--QVACGGKHT-LALTEDELYCFGGGEFGQLGLGTLVFVADSP 284
Query: 413 KEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGE-- 470
V R +V V CG H+A I D G L+T+GD G+LGH D
Sbjct: 285 VAVGHFRKGRVTHVTCGEQHSALITD-----------SGLLYTFGDGRHGKLGHGDENFT 333
Query: 471 RKLLPTCVTRLVDFDFVQASCG 492
+ PT R ++ + +CG
Sbjct: 334 NQFTPTVCQRFFEYSVMTVACG 355
Score = 264 (98.0 bits), Expect = 1.3e-17, Sum P(3) = 1.3e-17
Identities = 86/292 (29%), Positives = 134/292 (45%)
Query: 265 QNISLGAKHAALVTKEGEVFCWGEGKDGRLG-HKVNMDVSCPKLVECLSGINVQSVSCGE 323
Q+++ G H + T +GE+ G DG+LG N +S +L ++ +S G+
Sbjct: 89 QSVACGTDHTLVSTSQGEILAAGGNSDGQLGLGHCNDSISFQRLRPFCDYAPIKLLSAGD 148
Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
+ ALT+ G ++ WG N+ G +G LP++L + G + V+CG H+A+
Sbjct: 149 HTSAALTEDGRLFLWGDNSAGQ--LGFGNDSHALLPKEL--NM-GQSIHWVSCGYRHSAL 203
Query: 384 VSTSGQLFTYG---DGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIM 440
V+ SG ++++G DG G+ H L N S P+ VESL V VACG HT A+ +
Sbjct: 204 VTDSGDVYSFGESADGRLGLSAH-QLANHSYPQRVESLHS--VLQVACGGKHTLALTEDE 260
Query: 441 VDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLT 500
+ C GG F G G L V P V +CG + +T
Sbjct: 261 L-YC----FGGGEF--GQLGLGTLVFVADS----PVAVGHFRKGRVTHVTCGEQHSALIT 309
Query: 501 GLGKVYTMGSAVHGQLGNPKAK--DRSITVVEGKLKEEFVKGISSGSYHVAV 550
G +YT G HG+LG+ ++ V + E V ++ GS H+ V
Sbjct: 310 DSGLLYTFGDGRHGKLGHGDENFTNQFTPTVCQRFFEYSVMTVACGSSHMLV 361
Score = 230 (86.0 bits), Expect = 4.8e-14, Sum P(2) = 4.8e-14
Identities = 128/545 (23%), Positives = 213/545 (39%)
Query: 319 VSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGE 378
+SCG+ + +T+ G ++ +G NN G +G + P L G R VACG
Sbjct: 39 ISCGQSHSAFVTEQGRLFVFGDNNRGQ--LGLQIKGPVTKP-VCVKVLKGERAQSVACGT 95
Query: 379 WHTAIVSTSGQLFTYG---DGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAA 435
HT + ++ G++ G DG G LGH N ++S + +K ++ G +AA
Sbjct: 96 DHTLVSTSQGEILAAGGNSDGQLG-LGHCN-DSISFQRLRPFCDYAPIKLLSAGDHTSAA 153
Query: 436 IVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRML 495
+ + G+LF WGD G+LG + LLP + +V SCG
Sbjct: 154 LTE-----------DGRLFLWGDNSAGQLGFGNDSHALLPKELNMGQSIHWV--SCGYRH 200
Query: 496 TVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGG 555
+ +T G VY+ G + G+LG + + + + V ++ G H LT
Sbjct: 201 SALVTDSGDVYSFGESADGRLGLSAHQLANHSYPQRVESLHSVLQVACGGKHTLALTED- 259
Query: 556 SVYTWGKNANGQLGLGDSQ-ERETPTFVEALRDRQVESVVCGSSITAAIC---------- 604
+Y +G GQLGLG ++P V R +V V CG +A I
Sbjct: 260 ELYCFGGGEFGQLGLGTLVFVADSPVAVGHFRKGRVTHVTCGEQHSALITDSGLLYTFGD 319
Query: 605 -LHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNKGKPSR 663
H + GD++ +Q R +++ AC + ++ P + +
Sbjct: 320 GRHGKLGHGDENFTNQFTPTVCQRFFEYSVMTV------ACGSSHML-VFARPRQQENEE 372
Query: 664 VC----DTCYNHLQKITHS---GRLLKQENQSPRNLLNLQGSLSEEVKEEKGALTPSRGQ 716
VC D Y++L + + G+ L+ L++ SLS + +R +
Sbjct: 373 VCLEDEDVTYSYLDRCYTTMIQGQPLEHIPDPESALVSQSTSLSSPLPTSHRWSLSTRAR 432
Query: 717 SFTSKQSRNVERKPG-ECLESASSLSSGLQRWGQVSCPIRFK-THCHEKSVEPTPIPKTQ 774
K+S + + P L ++ + L G + P K T H + P T
Sbjct: 433 R-RQKESSSAQFGPEFSNLPPLTTSYTALALTGTILQPRSAKGTPKHINTDAPVDTSITV 491
Query: 775 MSTHSPLLRKISLGSNFIPIASTVEKDLSESNKMLNEEVQRLRDQARNLEKQ-CQIGNQK 833
+S P I+ + T E LS+ N EE + QA E Q + +
Sbjct: 492 LSKE-PSFTPITKSPDDCQCVETSENSLSDKNSAGREE--NVFQQALPTELQVASVSHPS 548
Query: 834 VQECQ 838
+ E Q
Sbjct: 549 ITESQ 553
Score = 49 (22.3 bits), Expect = 1.4e-27, Sum P(3) = 1.4e-27
Identities = 22/100 (22%), Positives = 42/100 (42%)
Query: 645 STKKIINASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQGSLSEEVK 704
+ KK N +G + + + L T ++ + EN S L L+ ++ +
Sbjct: 781 TAKKAKNKRTAVERGPIAELSPQTPSPLSVSTQKSKV-EPENSS----LQLRSAMQTQEA 835
Query: 705 EEKGALTPSRGQSFTSKQSRNVERKPGEC--LESASSLSS 742
EKG + QS ++ ++ K + +SAS+L S
Sbjct: 836 TEKGETNSNSPQSSENRSFPTIKSKKSDAEKSQSASTLQS 875
Score = 48 (22.0 bits), Expect = 1.4e-27, Sum P(3) = 1.4e-27
Identities = 17/49 (34%), Positives = 26/49 (53%)
Query: 799 EKDLSESNKMLNEEVQRLRD----QARNLEKQCQIGNQKVQECQQKIEE 843
EK ESN+ EE + ++ Q N+EK Q N K++E + + EE
Sbjct: 1479 EKKQRESNEEEEEEGEEEKEEEGEQKENVEKDKQ--NSKLRENKDEEEE 1525
Score = 42 (19.8 bits), Expect = 5.6e-27, Sum P(3) = 5.6e-27
Identities = 14/49 (28%), Positives = 25/49 (51%)
Query: 797 TVEKDLSESNKMLNEEVQRLRDQARNLEKQCQIGNQKVQEC--QQKIEE 843
T E E + NEE + ++A EK+ + N++ +E ++K EE
Sbjct: 1452 TRETSEEEEEQQENEEEEEEEEEAEWKEKKQRESNEEEEEEGEEEKEEE 1500
Score = 40 (19.1 bits), Expect = 9.1e-27, Sum P(3) = 9.1e-27
Identities = 12/45 (26%), Positives = 21/45 (46%)
Query: 799 EKDLSESNKMLNEEVQRLRDQARNLEKQCQIGNQKVQECQQKIEE 843
+KD SE + E + + +N K + + +E QQ+ EE
Sbjct: 1425 QKDTSEEEEQAEESEEEEEETEQNSGKTRETSEE--EEEQQENEE 1467
Score = 39 (18.8 bits), Expect = 1.0e-26, Sum P(2) = 1.0e-26
Identities = 8/39 (20%), Positives = 20/39 (51%)
Query: 701 EEVKEEKGALTPSRGQSFTSKQSRNVERKPGECLESASS 739
EE +EE+G + T ++ +N++ + ++ +S
Sbjct: 1564 EEEEEEEGNEEEEEEEEETKREKKNIKTEKNRHKQTVTS 1602
Score = 39 (18.8 bits), Expect = 1.5e-26, Sum P(3) = 1.5e-26
Identities = 28/103 (27%), Positives = 46/103 (44%)
Query: 713 SRGQSFTSKQSRNVERKPGECLESASSLSSGLQRWGQVSCPIRFKTHCHEKSVEPTPIPK 772
S QS T+K S + G+ S SS S L R ++ + KT ++ V T P
Sbjct: 914 SNNQSATNKSSAPKAAESGKLFSSTSS-SPQL-RQSPLN-KRKLKTVEDKEPVLVTETPH 970
Query: 773 TQ-----MSTHSPLLRKISLGSNFIPIASTV--EKDLSESNKM 808
Q M + +L +++ + + A+ V E L +SN+M
Sbjct: 971 QQSEQSLMGSVVSVLPAMAIAAPLLIKAAEVLSETSLEQSNEM 1013
Score = 37 (18.1 bits), Expect = 1.9e-26, Sum P(3) = 1.9e-26
Identities = 11/46 (23%), Positives = 24/46 (52%)
Query: 799 EKDLSESNKMLNEEVQRLRDQARNLEKQCQIGNQKV-QECQQKIEE 843
E++ E N+ EE + + + +N++ + Q V E +++ EE
Sbjct: 1565 EEEEEEGNEEEEEEEEETKREKKNIKTEKNRHKQTVTSEEEEEGEE 1610
>FB|FBgn0035207 [details] [associations]
symbol:CG9153 species:7227 "Drosophila melanogaster"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS;IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 HSSP:Q05086 EMBL:AY128479 ProteinModelPortal:Q8MQN4
SMR:Q8MQN4 PaxDb:Q8MQN4 PRIDE:Q8MQN4 FlyBase:FBgn0035207
InParanoid:Q8MQN4 OrthoDB:EOG4WDBSR ChiTaRS:CG9153
ArrayExpress:Q8MQN4 Bgee:Q8MQN4 Uniprot:Q8MQN4
Length = 1058
Score = 345 (126.5 bits), Expect = 1.9e-27, P = 1.9e-27
Identities = 91/280 (32%), Positives = 142/280 (50%)
Query: 246 TQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMD-VSC 304
T+ L+P+L + ++ I G++H+ ++ G+V WG+ G+LGH + + V
Sbjct: 78 TKRPLLIPELQDYVII----QICCGSRHSLALSDWGQVLSWGDNDCGQLGHATDKEIVQL 133
Query: 305 PKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHW-LPRKLF 363
PK+V L V ++CG + ALT GE+Y+WG N +G V +H P +L
Sbjct: 134 PKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRL- 192
Query: 364 DTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKV 423
TL G+ ++ +ACG H+ ++S SG +F +G G LG + N S P ++++LR L V
Sbjct: 193 TTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRSYPTQLKTLRTLGV 252
Query: 424 KSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVD 483
+ VACG + + +N GG +FT G G+LGH ++LP V L+
Sbjct: 253 RFVACGDEFSVFL---------TNE-GG-VFTCGAGAYGQLGHGFSSNEMLPRMVMELMG 301
Query: 484 FDFVQASCGRMLTVGLT-GLGKVYTMGSAVHGQLGNPKAK 522
Q +CG T+ L G+VY G GQLG K
Sbjct: 302 STITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTK 341
Score = 322 (118.4 bits), Expect = 5.7e-25, P = 5.7e-25
Identities = 96/358 (26%), Positives = 173/358 (48%)
Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
VQ ++ G +H +T G+V+ G +LGH ++ P L+ L + + CG
Sbjct: 42 VQQVACGHRHTLFLTATGKVYACGSNDYSQLGH--DLPTKRPLLIPELQDYVIIQICCGS 99
Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSH-WLPRKLFDTLDGVRVSKVACGEWHTA 382
+ AL+ G++ +WG N+ G +G + LP K+ L V ++ACG H+
Sbjct: 100 RHSLALSDWGQVLSWGDNDCGQ--LGHATDKEIVQLP-KVVRQLVTKTVVQIACGNNHSL 156
Query: 383 IVSTSGQLFTYGDGTFGVLG---HGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDI 439
+++ G+L+++G +G LG +L + + P + +L G+ + ++ACG H+ I
Sbjct: 157 ALTSCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLI--- 213
Query: 440 MVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGL 499
KS A+ F WG + G+LG D + PT + L +CG +V L
Sbjct: 214 ----SKSGAV----FGWGRNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEFSVFL 265
Query: 500 TGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVY 558
T G V+T G+ +GQLG+ + + + + +L + ++ G+ H +A++ S G VY
Sbjct: 266 TNEGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVY 325
Query: 559 TWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSIT-AAICLHKSISVGDQS 615
+G ++GQLG ++ P V S + S+ + ++ + + S GDQS
Sbjct: 326 AFGLGSSGQLGTRSTKSLMLPQVVIGPWVSPSGSALLQSNDSQVSLVIRQIFSGGDQS 383
Score = 308 (113.5 bits), Expect = 1.9e-23, P = 1.9e-23
Identities = 99/332 (29%), Positives = 146/332 (43%)
Query: 282 EVFCWGEGKDGRLGHKVNMD--VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
E++CWG G+LG D + P + VQ V+CG T LT +G++Y G
Sbjct: 6 ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACG 65
Query: 340 HNNHGADLVGERRSRSHWLPRK---LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG 396
N++ +G H LP K L L + ++ CG H+ +S GQ+ ++GD
Sbjct: 66 SNDYSQ--LG------HDLPTKRPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDN 117
Query: 397 TFGVLGHGNLQNVSQ-PKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFT 455
G LGH + + Q PK V L V +ACG H+ A+ C G+L++
Sbjct: 118 DCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTS-----C------GELYS 166
Query: 456 WGDADKGRLGHVDGERKLL----PTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
WG G+LG V+ L P +T L+ +CG + ++ G V+ G
Sbjct: 167 WGSNIYGQLG-VNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRN 225
Query: 512 VHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLG 571
GQLG +RS L+ V+ ++ G LT+ G V+T G A GQLG G
Sbjct: 226 NCGQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHG 285
Query: 572 DSQERETPTFVEALRDRQVESVVCGSSITAAI 603
S P V L + V CG+ T A+
Sbjct: 286 FSSNEMLPRMVMELMGSTITQVACGNRHTLAL 317
Score = 211 (79.3 bits), Expect = 5.2e-13, P = 5.2e-13
Identities = 50/164 (30%), Positives = 90/164 (54%)
Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
P L + + + + I+ G H+ L++K G VF WG G+LG + S P ++ L
Sbjct: 189 PLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRSYPTQLKTLR 248
Query: 313 GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVS 372
+ V+ V+CG+ + LT G ++T G +G +G S + LPR + + + G ++
Sbjct: 249 TLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQ--LGHGFSSNEMLPRMVMELM-GSTIT 305
Query: 373 KVACGEWHT-AIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEV 415
+VACG HT A+V + G+++ +G G+ G LG + +++ P+ V
Sbjct: 306 QVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLMLPQVV 349
Score = 202 (76.2 bits), Expect = 4.9e-12, P = 4.9e-12
Identities = 52/159 (32%), Positives = 79/159 (49%)
Query: 448 AIGGKLFTWGDADKGRLG--HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKV 505
A G +L+ WG G+LG ++ E+ L P+ + D Q +CG T+ LT GKV
Sbjct: 2 ASGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKV 61
Query: 506 YTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
Y GS + QLG+ R + + E L++ + I GS H L+ G V +WG N
Sbjct: 62 YACGSNDYSQLGHDLPTKRPLLIPE--LQDYVIIQICCGSRHSLALSDWGQVLSWGDNDC 119
Query: 566 GQLGLGDSQER-ETPTFVEALRDRQVESVVCGSSITAAI 603
GQLG +E + P V L + V + CG++ + A+
Sbjct: 120 GQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLAL 158
>UNIPROTKB|F1N1N9 [details] [associations]
symbol:HERC5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050688 "regulation of defense response to virus"
evidence=IEA] [GO:0042296 "ISG15 ligase activity" evidence=IEA]
[GO:0032020 "ISG15-protein conjugation" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0050688 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:KDWITNT GO:GO:0042296
GO:GO:0032020 EMBL:DAAA02017014 IPI:IPI00907336
Ensembl:ENSBTAT00000052811 Uniprot:F1N1N9
Length = 959
Score = 358 (131.1 bits), Expect = 2.1e-27, Sum P(2) = 2.1e-27
Identities = 105/332 (31%), Positives = 164/332 (49%)
Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGR-LGHKVNMDVSCPKLVEC-LSGINVQSVSCGEF 324
I LG K +GE DG+ +K +++ + +C L N+ ++CG++
Sbjct: 102 IKLGKKMKIHSMDQGEEHMLVLSSDGKPFEYKYSIEHA---RFQCILQEKNIIQITCGDY 158
Query: 325 QTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIV 384
+ AL+K GE++ WG N G VG R S P ++ + L GV + +++ GE H+ +
Sbjct: 159 HSLALSKGGELFAWGQNLDGQLGVG-RIFASTSTP-EIVENLSGVPLVQISAGEAHSMAL 216
Query: 385 STSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRC 444
S SG ++++G G LG G+ N P +E+L KV+ +ACG HTA +
Sbjct: 217 SMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVEFLACGGCHTALLT------- 269
Query: 445 KSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVG-LTGLG 503
KS G +FT+GD G+LGH + +L P VT LV Q +CGR T+ ++ G
Sbjct: 270 KS----GLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGNRVTQIACGRQHTLAYVSDTG 325
Query: 504 KVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGG--SVYTWG 561
KV++ GS GQLGN +++ I L E +K SS S ++ +GG S+ W
Sbjct: 326 KVFSFGSGKEGQLGNGGTRNQLIPRPMKLLSSEELKSESSTSVKELIMVAGGNQSILIWM 385
Query: 562 KNANGQLGLGDSQERETPTFVEALRDRQVESV 593
+ N + L R+ PT E R + V
Sbjct: 386 EKENSYVNL----RRKIPTLNEGTVKRWIADV 413
Score = 354 (129.7 bits), Expect = 5.6e-27, Sum P(2) = 5.6e-27
Identities = 78/214 (36%), Positives = 124/214 (57%)
Query: 263 DVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG-HKVNMDVSCPKLVECLSGINVQSVSC 321
++ I+ G H+ ++K GE+F WG+ DG+LG ++ S P++VE LSG+ + +S
Sbjct: 149 NIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISA 208
Query: 322 GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT 381
GE + AL+ SG +Y+WG N+ G +G ++ P + LD +V +ACG HT
Sbjct: 209 GEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKES--P-SCIEALDDQKVEFLACGGCHT 265
Query: 382 AIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMV 441
A+++ SG +FT+GDG +G LGH + QN +P+ V L G +V +ACG HT A V
Sbjct: 266 ALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGNRVTQIACGRQHTLAYVS--- 322
Query: 442 DRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLP 475
D GK+F++G +G+LG+ +L+P
Sbjct: 323 DT-------GKVFSFGSGKEGQLGNGGTRNQLIP 349
Score = 265 (98.3 bits), Expect = 2.6e-17, Sum P(2) = 2.6e-17
Identities = 64/202 (31%), Positives = 108/202 (53%)
Query: 230 GGDI---GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCW 286
GG++ G +DG + + P+++E+ + + IS G H+ ++ G V+ W
Sbjct: 166 GGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISAGEAHSMALSMSGNVYSW 225
Query: 287 GEGKDGRLG--HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHG 344
G G+LG H N + P +E L V+ ++CG T LTKSG ++T+G +G
Sbjct: 226 GRNDCGQLGLGHTYNKE--SPSCIEALDDQKVEFLACGGCHTALLTKSGLVFTFGDGKYG 283
Query: 345 ADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT-AIVSTSGQLFTYGDGTFGVLGH 403
+G +++ PR L L G RV+++ACG HT A VS +G++F++G G G LG+
Sbjct: 284 Q--LGHNSTQNELRPR-LVTGLVGNRVTQIACGRQHTLAYVSDTGKVFSFGSGKEGQLGN 340
Query: 404 GNLQNVSQPKEVESLRGLKVKS 425
G +N P+ ++ L ++KS
Sbjct: 341 GGTRNQLIPRPMKLLSSEELKS 362
Score = 207 (77.9 bits), Expect = 4.4e-11, Sum P(2) = 4.4e-11
Identities = 52/185 (28%), Positives = 98/185 (52%)
Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVEC-L 311
PK ++ + + ++ G +H +++ +G+ F +K +++ + +C L
Sbjct: 99 PKCIKLGKKMKIHSMDQGEEHMLVLSSDGKPF----------EYKYSIEHA---RFQCIL 145
Query: 312 SGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRV 371
N+ ++CG++ + AL+K GE++ WG N G VG R S P ++ + L GV +
Sbjct: 146 QEKNIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVG-RIFASTSTP-EIVENLSGVPL 203
Query: 372 SKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPW 431
+++ GE H+ +S SG ++++G G LG G+ N P +E+L KV+ +ACG
Sbjct: 204 VQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVEFLACGGC 263
Query: 432 HTAAI 436
HTA +
Sbjct: 264 HTALL 268
Score = 196 (74.1 bits), Expect = 6.5e-10, Sum P(2) = 6.5e-10
Identities = 45/129 (34%), Positives = 75/129 (58%)
Query: 477 CVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK--AKDRSITVVEGKLK 534
C+ L + + +Q +CG ++ L+ G+++ G + GQLG + A + +VE
Sbjct: 143 CI--LQEKNIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSG 200
Query: 535 EEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVV 594
V+ IS+G H L+ G+VY+WG+N GQLGLG + +E+P+ +EAL D++VE +
Sbjct: 201 VPLVQ-ISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVEFLA 259
Query: 595 CGSSITAAI 603
CG TA +
Sbjct: 260 CGGCHTALL 268
Score = 183 (69.5 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 56/188 (29%), Positives = 85/188 (45%)
Query: 418 LRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG--HVDGERKLLP 475
L+ + + CG +H+ A+ + GG+LF WG G+LG + P
Sbjct: 145 LQEKNIIQITCGDYHSLAL-----------SKGGELFAWGQNLDGQLGVGRIFASTST-P 192
Query: 476 TCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDR-SITVVEGKLK 534
V L VQ S G ++ L+ G VY+ G GQLG ++ S + +E L
Sbjct: 193 EIVENLSGVPLVQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEA-LD 251
Query: 535 EEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVV 594
++ V+ ++ G H A+LT G V+T+G GQLG +Q P V L +V +
Sbjct: 252 DQKVEFLACGGCHTALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGNRVTQIA 311
Query: 595 CGSSITAA 602
CG T A
Sbjct: 312 CGRQHTLA 319
Score = 37 (18.1 bits), Expect = 2.1e-27, Sum P(2) = 2.1e-27
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 800 KDLSESNKMLNEEVQRLRD 818
+DL E + +L E +Q L D
Sbjct: 739 EDLKELSPVLGESLQTLLD 757
>TAIR|locus:2146142 [details] [associations]
symbol:AT5G16040 "AT5G16040" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008536 "Ran GTPase binding" evidence=ISS]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002688 EMBL:AL391145
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 UniGene:At.19750
UniGene:At.49027 EMBL:BT028960 IPI:IPI00525887 PIR:T51387
RefSeq:NP_197108.1 HSSP:O87916 ProteinModelPortal:Q9LFS0 SMR:Q9LFS0
PRIDE:Q9LFS0 EnsemblPlants:AT5G16040.1 GeneID:831461
KEGG:ath:AT5G16040 TAIR:At5g16040 InParanoid:Q9LFS0 OMA:TTGHPME
PhylomeDB:Q9LFS0 ProtClustDB:CLSN2686124 Genevestigator:Q9LFS0
Uniprot:Q9LFS0
Length = 396
Score = 318 (117.0 bits), Expect = 2.5e-27, P = 2.5e-27
Identities = 96/363 (26%), Positives = 169/363 (46%)
Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
V+ WG G G +G D + + VDAL P +V+++ G++++ + +
Sbjct: 7 VIAWGSGE-DGQLGLGTDEE-KELASVVDALEP--------FNVRSVVGGSRNSLAICDD 56
Query: 281 GEVFCWGEGKDGRLGHKVNMDV-SCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
G++F WG + G LGH S P LV+ L+ + + + G + A+ G Y WG
Sbjct: 57 GKLFTWGWNQRGTLGHPPETKTESTPSLVKSLANVKIVQAAIGGWHCLAVDDQGRAYAWG 116
Query: 340 HNNHGA-------DLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFT 392
N +G D G R +P++ L V +VA G H+ +++ G ++T
Sbjct: 117 GNEYGQCGEEPSKDETGRPVRRDIVIPKRCAQQLT---VRQVAAGGTHSVVLTREGYVWT 173
Query: 393 YGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGK 452
+G G+++ +S P V+ L +++ +A G +H A+ + G
Sbjct: 174 WGQPW----PPGDIKQISVPVRVQGLENVRL--IAVGAFHNLALKE-----------DGT 216
Query: 453 LFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAV 512
L+ WG+ + G+LG D + + P V L D V + G + LT G+VY G
Sbjct: 217 LWAWGNNEYGQLGTGDTQPRSYPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGE 276
Query: 513 HGQLGNPKAKDRSITVVEGKLK----EEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
HG+LG D+S ++ K+ E+ ++ +S G H LT G ++++G+ +G+L
Sbjct: 277 HGRLGFGD-NDKSSKMLPQKVNLLAGEDIIQ-VSCGGTHSVALTRDGRIFSFGRGDHGRL 334
Query: 569 GLG 571
G G
Sbjct: 335 GYG 337
Score = 279 (103.3 bits), Expect = 6.2e-22, P = 6.2e-22
Identities = 85/325 (26%), Positives = 144/325 (44%)
Query: 283 VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN 342
V WG G+DG+LG + + +V+ L NV+SV G + A+ G+++TWG N
Sbjct: 7 VIAWGSGEDGQLGLGTDEEKELASVVDALEPFNVRSVVGGSRNSLAICDDGKLFTWGWNQ 66
Query: 343 HGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLG 402
G L +++ P L +L V++ + A G WH V G+ + +G +G G
Sbjct: 67 RGT-LGHPPETKTESTP-SLVKSLANVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG 124
Query: 403 HGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA-DK 461
+ S+ + +R V C T V G ++TWG
Sbjct: 125 ----EEPSKDETGRPVRRDIVIPKRCAQQLTVRQVAAGGTHSVVLTREGYVWTWGQPWPP 180
Query: 462 GRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA 521
G + + +P V L + + + G + L G ++ G+ +GQLG
Sbjct: 181 GDIKQIS-----VPVRVQGLENVRLI--AVGAFHNLALKEDGTLWAWGNNEYGQLGTGDT 233
Query: 522 KDRSITV-VEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQE--RET 578
+ RS + V+G L + + I++G +H LT+ G VY WG+ +G+LG GD+ + +
Sbjct: 234 QPRSYPIPVQG-LDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKML 292
Query: 579 PTFVEALRDRQVESVVCGSSITAAI 603
P V L + V CG + + A+
Sbjct: 293 PQKVNLLAGEDIIQVSCGGTHSVAL 317
Score = 237 (88.5 bits), Expect = 8.4e-17, P = 8.4e-17
Identities = 61/197 (30%), Positives = 99/197 (50%)
Query: 263 DVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCG 322
+V+ I++GA H + ++G ++ WG + G+LG S P V+ L + + ++ G
Sbjct: 197 NVRLIAVGAFHNLALKEDGTLWAWGNNEYGQLGTGDTQPRSYPIPVQGLDDLTLVDIAAG 256
Query: 323 EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTA 382
+ + ALT GE+Y WG HG G+ S LP+K+ + L G + +V+CG H+
Sbjct: 257 GWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKMLPQKV-NLLAGEDIIQVSCGGTHSV 315
Query: 383 IVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEV---------------ESLRGLKV-KSV 426
++ G++F++G G G LG+G QP E+ E G + K V
Sbjct: 316 ALTRDGRIFSFGRGDHGRLGYGRKVTTGQPLELPIHIPPPEGRFNHTDEEDDGKWIAKHV 375
Query: 427 ACGPWHTAAIVDIMVDR 443
ACG HT AIV+ D+
Sbjct: 376 ACGGRHTLAIVEWKYDQ 392
Score = 189 (71.6 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 60/218 (27%), Positives = 101/218 (46%)
Query: 384 VSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
++++ + +G G G LG G + V++L V+SV G ++ AI D
Sbjct: 1 MASATSVIAWGSGEDGQLGLGTDEEKELASVVDALEPFNVRSVVGGSRNSLAICD----- 55
Query: 444 CKSNAIGGKLFTWGDADKGRLGHV-DGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGL 502
GKLFTWG +G LGH + + + P+ V L + VQA+ G + +
Sbjct: 56 ------DGKLFTWGWNQRGTLGHPPETKTESTPSLVKSLANVKIVQAAIGGWHCLAVDDQ 109
Query: 503 GKVYTMGSAVHGQLGNPKAKD-------RSITVVEGKLKEEFVKGISSGSYHVAVLTSGG 555
G+ Y G +GQ G +KD R I + + ++ V+ +++G H VLT G
Sbjct: 110 GRAYAWGGNEYGQCGEEPSKDETGRPVRRDIVIPKRCAQQLTVRQVAAGGTHSVVLTREG 169
Query: 556 SVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESV 593
V+TWG+ GD ++ P V+ L + ++ +V
Sbjct: 170 YVWTWGQ----PWPPGDIKQISVPVRVQGLENVRLIAV 203
>UNIPROTKB|F1LPM8 [details] [associations]
symbol:Herc6 "Protein Herc6" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
RGD:1561739 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
EMBL:AC126722 IPI:IPI00553869 Ensembl:ENSRNOT00000058626
ArrayExpress:F1LPM8 Uniprot:F1LPM8
Length = 1036
Score = 341 (125.1 bits), Expect = 2.6e-27, Sum P(2) = 2.6e-27
Identities = 95/318 (29%), Positives = 164/318 (51%)
Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKL-VECL 311
P+ LE+ L + + G +H+ L+ V+ G+ G+LG K P+ ++ L
Sbjct: 19 PRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEEPIQAL 78
Query: 312 SGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRV 371
S +++ VSCG+ + A+ G ++TWG + G +GE + S ++P K+ ++L G+++
Sbjct: 79 STVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEIS-FMPTKI-NSLAGIKI 136
Query: 372 SKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGN-LQNVSQPKEVESLRGLKVKSVACGP 430
+V+CG +H+ +S GQ+F++G G LG GN L + + P++V+SL G+ + VA G
Sbjct: 137 IQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGG 196
Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRL---GH-VDGERKLLPTCVTRLVDFDF 486
H+ A+ +M G F WG+ G+L G+ E+ P + L +
Sbjct: 197 THSFAL-SLM----------GTSFGWGNNRSGQLALSGNSAKAEQIYKPHSIGALKTLNV 245
Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGISSGS 545
V SCG T LT G+V+T G + QL + P++ ++EG V I GS
Sbjct: 246 VYISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRSGRGGPQLIEGI--GGHVSQIECGS 303
Query: 546 YH-VAVLTSGGSVYTWGK 562
YH +A + + G V + G+
Sbjct: 304 YHTIAYVYTTGQVVSLGR 321
Score = 304 (112.1 bits), Expect = 2.7e-23, Sum P(2) = 2.7e-23
Identities = 93/323 (28%), Positives = 153/323 (47%)
Query: 305 PKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFD 364
P+ +E +G+ + + GE + L + +Y+ G N+ G +G++ +S P +
Sbjct: 19 PRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQ--LGQKSPQSTKRPEEPIQ 76
Query: 365 TLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVS-QPKEVESLRGLKV 423
L V + V+CG+ H+ V G++FT+G G+ G LG G + +S P ++ SL G+K+
Sbjct: 77 ALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGIKI 136
Query: 424 KSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGE-RKLLPTCVTRLV 482
V+CG +H+ A+ + G++F+WG +G+LG + + P V L
Sbjct: 137 IQVSCGHYHSLALSE-----------DGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLE 185
Query: 483 DFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL---GNPKAKDRSITVVE--GKLKEEF 537
Q + G + L+ +G + G+ GQL GN AK I G LK
Sbjct: 186 GIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGN-SAKAEQIYKPHSIGALKTLN 244
Query: 538 VKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGS 597
V IS G H +VLT G V+T+G +++ QL R P +E + V + CGS
Sbjct: 245 VVYISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRSGRGGPQLIEGIGGH-VSQIECGS 303
Query: 598 SITAAICLHKS--ISVGDQSSCS 618
T A +S+G SC+
Sbjct: 304 YHTIAYVYTTGQVVSLGRGPSCT 326
Score = 274 (101.5 bits), Expect = 4.7e-20, Sum P(2) = 4.7e-20
Identities = 75/279 (26%), Positives = 135/279 (48%)
Query: 239 GSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKV 298
G + Q Q + +++ + + +S G +H+ V +G VF WG G +G+LG
Sbjct: 58 GQLGQKSPQSTKRPEEPIQALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGE 117
Query: 299 NMDVS-CPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHW 357
+ ++S P + L+GI + VSCG + + AL++ G++++WG N G +G S
Sbjct: 118 SKEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLC-SQA 176
Query: 358 LPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLG-HGN---LQNVSQPK 413
P+K+ +L+G+ +++VA G H+ +S G F +G+ G L GN + + +P
Sbjct: 177 SPQKV-KSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGNSAKAEQIYKPH 235
Query: 414 EVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL 473
+ +L+ L V ++CG HT+ + + D G++FT+G + +L H +
Sbjct: 236 SIGALKTLNVVYISCGYEHTSVLTE---D--------GQVFTFGGSSSEQLQHSPRSGRG 284
Query: 474 LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAV 512
P + + Q CG T+ VYT G V
Sbjct: 285 GPQLIEG-IGGHVSQIECGSYHTIAY-----VYTTGQVV 317
Score = 243 (90.6 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
Identities = 56/207 (27%), Positives = 104/207 (50%)
Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
G +G + +++ + +P + S + + +S G H+ ++++G+VF WG + G+
Sbjct: 106 GAGSEGQLGIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQ 165
Query: 294 LGHKVNM-DVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGA-DLVGER 351
LG N+ + P+ V+ L GI + V+ G + AL+ G + WG+N G L G
Sbjct: 166 LGLGNNLCSQASPQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGNS 225
Query: 352 -RSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVS 410
++ + P + L + V ++CG HT++++ GQ+FT+G + L H
Sbjct: 226 AKAEQIYKPHSI-GALKTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRSGRG 284
Query: 411 QPKEVESLRGLKVKSVACGPWHTAAIV 437
P+ +E + G V + CG +HT A V
Sbjct: 285 GPQLIEGIGG-HVSQIECGSYHTIAYV 310
Score = 194 (73.4 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 59/201 (29%), Positives = 99/201 (49%)
Query: 411 QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGE 470
QP+ +E+ GLK+ A G H+ + SN ++++ GD +G+LG +
Sbjct: 18 QPRRLEAGTGLKLLKAASGERHSLLLF--------SNH---RVYSCGDNSRGQLGQKSPQ 66
Query: 471 ---RKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSI- 526
R P V D V SCG+ +V + G+V+T G+ GQLG ++K+ S
Sbjct: 67 STKRPEEPIQALSTVHIDLV--SCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFM 124
Query: 527 -TVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQ-ERETPTFVEA 584
T + + ++ +S G YH L+ G V++WG N GQLGLG++ + +P V++
Sbjct: 125 PTKINSLAGIKIIQ-VSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKS 183
Query: 585 LRDRQVESVVCGSSITAAICL 605
L + V G + + A+ L
Sbjct: 184 LEGIPLAQVAAGGTHSFALSL 204
Score = 55 (24.4 bits), Expect = 2.6e-27, Sum P(2) = 2.6e-27
Identities = 16/71 (22%), Positives = 37/71 (52%)
Query: 773 TQMSTHSPLLRKISLGSNFIPIASTVEKDLSESNKMLNEEVQRLRDQARNLEKQCQIGNQ 832
+Q+ P+++ S + + V+K L ++N L+ EV ++ D + NL+ ++ +
Sbjct: 548 SQLHNEVPMMKDTSNLKVSLEMMKEVQKILEKTNSHLHNEVPKMEDTS-NLKVLLEV-MK 605
Query: 833 KVQECQQKIEE 843
+V E ++ E
Sbjct: 606 EVHEANCQLPE 616
>UNIPROTKB|F1PBB3 [details] [associations]
symbol:HERC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:HIFAGTY EMBL:AAEX03016752
EMBL:AAEX03016750 EMBL:AAEX03016751 Ensembl:ENSCAFT00000015531
Uniprot:F1PBB3
Length = 1018
Score = 346 (126.9 bits), Expect = 1.2e-26, Sum P(2) = 1.2e-26
Identities = 91/309 (29%), Positives = 159/309 (51%)
Query: 262 LDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHK-VNMDVSCPKLVECLSGINVQSVS 320
++++ + G +H+ L+ G+V G+ G+LG + + + L ++V VS
Sbjct: 23 VELRQAASGERHSLLLLSNGQVHSCGDNGRGQLGQRGAPCSAQLKERIRALETLHVDLVS 82
Query: 321 CGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWH 380
CG+ + A+ G ++ WG + G GE + ++ +P K+ TL+ +++ +V+CG +H
Sbjct: 83 CGKEHSLAVCHKGRVFAWGAGSEGQLGTGEFKE-TNLIPMKI-KTLNDIKIKQVSCGHYH 140
Query: 381 TAIVSTSGQLFTYGDGTFGVLGHGN-LQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDI 439
+ +S GQ+F++G + G LG G + + P+ V SL G+ + VA G H+ A+
Sbjct: 141 SLALSEGGQVFSWGSNSDGQLGLGKKFPSQASPQRVRSLDGIPLAQVAAGGAHSFAL--- 197
Query: 440 MVDRCKSNAIGGKLFTWGDADKGRLG-H---VDGERKLLPTCVTRLVDFDFVQASCGRML 495
++ G F WG + G+L H V G+ P ++ L + + SCG
Sbjct: 198 --------SLSGTSFGWGRNNAGQLALHKNNVSGQ-SYKPYSISALKNLGVIYISCGYEH 248
Query: 496 TVGLTGLGKVYTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTS 553
TV LT GKV+T G +GQLG+ P A+ +VEG + V I GSYH +A + +
Sbjct: 249 TVVLTQNGKVFTFGDNTYGQLGHSPTAEKSGPQLVEGI--DGLVSQIDCGSYHTLAYVYT 306
Query: 554 GGSVYTWGK 562
G V ++G+
Sbjct: 307 TGKVVSFGR 315
Score = 307 (113.1 bits), Expect = 2.1e-22, Sum P(2) = 2.1e-22
Identities = 87/280 (31%), Positives = 138/280 (49%)
Query: 239 GSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKV 298
G + Q A L + + + L V +S G +H+ V +G VF WG G +G+LG
Sbjct: 53 GQLGQRGAPCSAQLKERIRALETLHVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGTGE 112
Query: 299 NMDVSC-PKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHW 357
+ + P ++ L+ I ++ VSCG + + AL++ G++++WG N+ G +G ++ S
Sbjct: 113 FKETNLIPMKIKTLNDIKIKQVSCGHYHSLALSEGGQVFSWGSNSDGQLGLG-KKFPSQA 171
Query: 358 LPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLG-HGNLQNVS----QP 412
P+++ +LDG+ +++VA G H+ +S SG F +G G L H N NVS +P
Sbjct: 172 SPQRV-RSLDGIPLAQVAAGGAHSFALSLSGTSFGWGRNNAGQLALHKN--NVSGQSYKP 228
Query: 413 KEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERK 472
+ +L+ L V ++CG HT + GK+FT+GD G+LGH K
Sbjct: 229 YSISALKNLGVIYISCGYEHTVVLTQ-----------NGKVFTFGDNTYGQLGHSPTAEK 277
Query: 473 LLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAV 512
P V +D Q CG T L VYT G V
Sbjct: 278 SGPQLVEG-IDGLVSQIDCGSYHT-----LAYVYTTGKVV 311
Score = 304 (112.1 bits), Expect = 4.5e-22, Sum P(2) = 4.5e-22
Identities = 91/316 (28%), Positives = 149/316 (47%)
Query: 311 LSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR 370
L G+ ++ + GE + L +G++++ G N G +G+R + ++ L+ +
Sbjct: 20 LGGVELRQAASGERHSLLLLSNGQVHSCGDNGRGQ--LGQRGAPCSAQLKERIRALETLH 77
Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQ-PKEVESLRGLKVKSVACG 429
V V+CG+ H+ V G++F +G G+ G LG G + + P ++++L +K+K V+CG
Sbjct: 78 VDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGTGEFKETNLIPMKIKTLNDIKIKQVSCG 137
Query: 430 PWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGER---KLLPTCVTRLVDFDF 486
+H+ A+ + GG++F+WG G+LG G++ + P V L
Sbjct: 138 HYHSLALSE-----------GGQVFSWGSNSDGQLGL--GKKFPSQASPQRVRSLDGIPL 184
Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK--AKDRSITVVE-GKLKEEFVKGISS 543
Q + G + L+ G + G GQL K +S LK V IS
Sbjct: 185 AQVAAGGAHSFALSLSGTSFGWGRNNAGQLALHKNNVSGQSYKPYSISALKNLGVIYISC 244
Query: 544 GSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
G H VLT G V+T+G N GQLG + E+ P VE + D V + CGS T A
Sbjct: 245 GYEHTVVLTQNGKVFTFGDNTYGQLGHSPTAEKSGPQLVEGI-DGLVSQIDCGSYHTLAY 303
Query: 604 CLH--KSISVGDQSSC 617
K +S G + +C
Sbjct: 304 VYTTGKVVSFGREPTC 319
Score = 285 (105.4 bits), Expect = 5.2e-20, Sum P(2) = 5.2e-20
Identities = 64/206 (31%), Positives = 108/206 (52%)
Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
G +G + + + L+P +++ + ++ +S G H+ +++ G+VF WG DG+
Sbjct: 101 GAGSEGQLGTGEFKETNLIPMKIKTLNDIKIKQVSCGHYHSLALSEGGQVFSWGSNSDGQ 160
Query: 294 LG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR 352
LG K + P+ V L GI + V+ G + AL+ SG + WG NN G + +
Sbjct: 161 LGLGKKFPSQASPQRVRSLDGIPLAQVAAGGAHSFALSLSGTSFGWGRNNAGQLALHKNN 220
Query: 353 -SRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQ 411
S + P + L + V ++CG HT +++ +G++FT+GD T+G LGH S
Sbjct: 221 VSGQSYKPYSI-SALKNLGVIYISCGYEHTVVLTQNGKVFTFGDNTYGQLGHSPTAEKSG 279
Query: 412 PKEVESLRGLKVKSVACGPWHTAAIV 437
P+ VE + GL V + CG +HT A V
Sbjct: 280 PQLVEGIDGL-VSQIDCGSYHTLAYV 304
Score = 43 (20.2 bits), Expect = 1.2e-26, Sum P(2) = 1.2e-26
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 811 EEVQRLRDQARNLEKQC 827
E V ++RDQ+ + KQC
Sbjct: 508 EAVCKMRDQSSKILKQC 524
>UNIPROTKB|F1PB99 [details] [associations]
symbol:HERC5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:KDWITNT EMBL:AAEX03016753
EMBL:AAEX03016752 Ensembl:ENSCAFT00000015560 Uniprot:F1PB99
Length = 1025
Score = 333 (122.3 bits), Expect = 3.5e-26, P = 3.5e-26
Identities = 77/213 (36%), Positives = 120/213 (56%)
Query: 267 ISLGAKHAALVTKE--GEVFCWGEGKDGRLG-HKVNMDVSCPKLVECLSGINVQSVSCGE 323
I+ G H+ ++K GE+F WG+ G+LG ++ + P+LVE LSG+ + +S G+
Sbjct: 140 ITCGDYHSLALSKGQGGELFAWGQNLHGQLGVGRLFTSIPTPQLVEHLSGVPLVQISAGK 199
Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
+ AL+ SG IY+WG N+ G +G + P L + LD +V +ACG HTA+
Sbjct: 200 AHSMALSMSGNIYSWGRNDLGQ--LGLGHTNGEDFP-SLIEALDNQKVEFLACGGSHTAL 256
Query: 384 VSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP-WHTAAIVDIMVD 442
++ G +FT+G G +G LGH + QN +P+ V L G +V VACG WHT A V +
Sbjct: 257 LTKDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQVACGSRWHTLAYVSDL-- 314
Query: 443 RCKSNAIGGKLFTWGDADKGRLGHVDGERKLLP 475
GK+F++G +G+LG+ +L+P
Sbjct: 315 --------GKVFSFGSGKEGQLGNGGTHNQLIP 339
Score = 250 (93.1 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 67/210 (31%), Positives = 106/210 (50%)
Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
++ WG+ L G +G V + T + P+L+E + + IS G H+ ++
Sbjct: 157 ELFAWGQN-LHGQLG------VGRLFTSIPT--PQLVEHLSGVPLVQISAGKAHSMALSM 207
Query: 280 EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
G ++ WG G+LG P L+E L V+ ++CG T LTK G ++T+G
Sbjct: 208 SGNIYSWGRNDLGQLGLGHTNGEDFPSLIEALDNQKVEFLACGGSHTALLTKDGLVFTFG 267
Query: 340 HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGE-WHT-AIVSTSGQLFTYGDGT 397
+G +G +++ PR L L G RV++VACG WHT A VS G++F++G G
Sbjct: 268 AGKYGQ--LGHNSTQNELRPR-LVTELAGNRVTQVACGSRWHTLAYVSDLGKVFSFGSGK 324
Query: 398 FGVLGHGNLQN--VSQPKEVESLRGLKVKS 425
G LG+G N + P ++ S LK +S
Sbjct: 325 EGQLGNGGTHNQLIPLPMKLPSNEELKFES 354
Score = 218 (81.8 bits), Expect = 8.8e-14, P = 8.8e-14
Identities = 61/216 (28%), Positives = 109/216 (50%)
Query: 371 VSKVACGEWHTAIVSTS--GQLFTYGDGTFGVLGHGNL-QNVSQPKEVESLRGLKVKSVA 427
+ ++ CG++H+ +S G+LF +G G LG G L ++ P+ VE L G+ + ++
Sbjct: 137 IIQITCGDYHSLALSKGQGGELFAWGQNLHGQLGVGRLFTSIPTPQLVEHLSGVPLVQIS 196
Query: 428 CGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG--HVDGERKLLPTCVTRLVDFD 485
G H+ A+ ++ G +++WG D G+LG H +GE P+ + L +
Sbjct: 197 AGKAHSMAL-----------SMSGNIYSWGRNDLGQLGLGHTNGED--FPSLIEALDNQK 243
Query: 486 FVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGS 545
+CG T LT G V+T G+ +GQLG+ ++ + +L V ++ GS
Sbjct: 244 VEFLACGGSHTALLTKDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQVACGS 303
Query: 546 -YH-VAVLTSGGSVYTWGKNANGQLGLGDSQERETP 579
+H +A ++ G V+++G GQLG G + + P
Sbjct: 304 RWHTLAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIP 339
Score = 207 (77.9 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 69/270 (25%), Positives = 126/270 (46%)
Query: 254 KLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVEC-LS 312
K ++ + + ++ GA+H +++ +G+ F + N + +C L
Sbjct: 86 KCIKLGKKMKIHSVDQGAEHMLILSSDGKPF------------EYNYSIEHASRFQCILQ 133
Query: 313 GINVQSVSCGEFQTCALTKS--GEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR 370
++ ++CG++ + AL+K GE++ WG N HG VG R S P+ L + L GV
Sbjct: 134 EKSIIQITCGDYHSLALSKGQGGELFAWGQNLHGQLGVG-RLFTSIPTPQ-LVEHLSGVP 191
Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
+ +++ G+ H+ +S SG ++++G G LG G+ P +E+L KV+ +ACG
Sbjct: 192 LVQISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTNGEDFPSLIEALDNQKVEFLACGG 251
Query: 431 WHTAAIV-DIMVDRCKSNAIG--GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFV 487
HTA + D +V + G G T + + + G R C +R +V
Sbjct: 252 SHTALLTKDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQVACGSRWHTLAYV 311
Query: 488 QASCGRMLTVGLTGLGKVYTMGSA-VHGQL 516
+ G++ + G GK +G+ H QL
Sbjct: 312 -SDLGKVFSFGS---GKEGQLGNGGTHNQL 337
Score = 191 (72.3 bits), Expect = 7.4e-11, Sum P(2) = 7.4e-11
Identities = 56/182 (30%), Positives = 81/182 (44%)
Query: 418 LRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPT- 476
L+ + + CG +H+ A+ S GG+LF WG G+LG V +PT
Sbjct: 132 LQEKSIIQITCGDYHSLAL---------SKGQGGELFAWGQNLHGQLG-VGRLFTSIPTP 181
Query: 477 -CVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKE 535
V L VQ S G+ ++ L+ G +Y+ G GQLG + L
Sbjct: 182 QLVEHLSGVPLVQISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTNGEDFPSLIEALDN 241
Query: 536 EFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVC 595
+ V+ ++ G H A+LT G V+T+G GQLG +Q P V L +V V C
Sbjct: 242 QKVEFLACGGSHTALLTKDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQVAC 301
Query: 596 GS 597
GS
Sbjct: 302 GS 303
Score = 179 (68.1 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 45/131 (34%), Positives = 74/131 (56%)
Query: 477 CVTRLVDFDFVQASCGRMLTVGLT-GLG-KVYTMGSAVHGQLGNPKAKDRSIT--VVEGK 532
C+ L + +Q +CG ++ L+ G G +++ G +HGQLG + T +VE
Sbjct: 130 CI--LQEKSIIQITCGDYHSLALSKGQGGELFAWGQNLHGQLGVGRLFTSIPTPQLVEHL 187
Query: 533 LKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVES 592
V+ IS+G H L+ G++Y+WG+N GQLGLG + + P+ +EAL +++VE
Sbjct: 188 SGVPLVQ-ISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTNGEDFPSLIEALDNQKVEF 246
Query: 593 VVCGSSITAAI 603
+ CG S TA +
Sbjct: 247 LACGGSHTALL 257
Score = 52 (23.4 bits), Expect = 7.4e-11, Sum P(2) = 7.4e-11
Identities = 21/91 (23%), Positives = 37/91 (40%)
Query: 346 DLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGN 405
D V + RS P+K +++ V G H I+S+ G+ F Y + +
Sbjct: 73 DFVLQSSPRSK--PKKCIKLGKKMKIHSVDQGAEHMLILSSDGKPFEYN---YSIEHASR 127
Query: 406 LQNVSQPKEVESLRGLKVKSVACGPWHTAAI 436
Q + Q K + + CG +H+ A+
Sbjct: 128 FQCILQEKSIIQ--------ITCGDYHSLAL 150
>TAIR|locus:2090136 [details] [associations]
symbol:AT3G15430 "AT3G15430" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] [GO:0006486 "protein glycosylation" evidence=RCA]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002686 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 EMBL:AB022218 EMBL:AC024081 HSSP:P18754
EMBL:AY150379 IPI:IPI00535822 RefSeq:NP_566512.1 RefSeq:NP_974323.1
UniGene:At.24353 ProteinModelPortal:Q9LDU3 SMR:Q9LDU3 IntAct:Q9LDU3
EnsemblPlants:AT3G15430.1 EnsemblPlants:AT3G15430.2 GeneID:820782
KEGG:ath:AT3G15430 TAIR:At3g15430 InParanoid:Q9LDU3 OMA:GDNERAQ
PhylomeDB:Q9LDU3 ProtClustDB:CLSN2688406 Genevestigator:Q9LDU3
Uniprot:Q9LDU3
Length = 488
Score = 323 (118.8 bits), Expect = 3.6e-26, P = 3.6e-26
Identities = 101/332 (30%), Positives = 154/332 (46%)
Query: 246 TQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGH-KVNMDVSC 304
TQ A P +E V +S H+A V + G+V G+ GH + +
Sbjct: 149 TQCVAFTP--IEFPFPAQVAQVSATQNHSAFVLQSGQVLTCGDNSSHCCGHLDTSRPIFR 206
Query: 305 PKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFD 364
PKLVE L G + V+ G T L++ G YT G N HG G+ R +P K+ +
Sbjct: 207 PKLVEALKGTPCKQVAAGLHFTVFLSREGHAYTCGSNTHGQLGHGDTLDRP--VP-KVVE 263
Query: 365 TLDGVR-VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLR--GL 421
L + V ++A G + V+ G ++++G G+ LGHG Q+ QP+ +++ + G+
Sbjct: 264 FLKTIGPVVQIAAGPSYVLAVTQDGSVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKGI 323
Query: 422 KVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRL 481
+ V+ G H A+ D SN G+++TWG G LGH D K+ P + L
Sbjct: 324 HILRVSAGDEHAVAL-----D---SN---GRVYTWGKGYCGALGHGDENDKITPQVLVNL 372
Query: 482 VDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK--AKDRSIT--VVEGKLKEEF 537
+ VQ + T L G +Y G G LG P D+ + V+E LK
Sbjct: 373 NNCLAVQVCARKRKTFVLVEGGLLYGFGWMGFGSLGFPDRGVSDKVLRPRVLEC-LKPHR 431
Query: 538 VKGISSGSYHVAVLTSGGSVYTWGKNANGQLG 569
V +S+G YH V+T G ++ +G N QLG
Sbjct: 432 VSQVSTGLYHTIVVTQRGRIFGFGDNERAQLG 463
Score = 248 (92.4 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 89/307 (28%), Positives = 140/307 (45%)
Query: 277 VTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIY 336
+T + E+F EG RL + +VE G +Q ++ G++ T + S ++Y
Sbjct: 76 LTTQKELFANCEGNWKRLFSFLQSVEQSSDMVETSQG-KMQ-IATGKYHTLLINNS-KVY 132
Query: 337 TWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG 396
+ G + G G ++ F +V++V+ + H+A V SGQ+ T GD
Sbjct: 133 SCGVSLSGVLAHGSETTQCVAFTPIEFPF--PAQVAQVSATQNHSAFVLQSGQVLTCGDN 190
Query: 397 TFGVLGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFT 455
+ GH + + +PK VE+L+G K VA G T + + R G +T
Sbjct: 191 SSHCCGHLDTSRPIFRPKLVEALKGTPCKQVAAGLHFT-----VFLSR------EGHAYT 239
Query: 456 WGDADKGRLGHVDGERKLLPTCVTRLVDFD-FVQASCGRMLTVGLTGLGKVYTMGSAVHG 514
G G+LGH D + +P V L VQ + G + +T G VY+ GS +
Sbjct: 240 CGSNTHGQLGHGDTLDRPVPKVVEFLKTIGPVVQIAAGPSYVLAVTQDGSVYSFGSGSNF 299
Query: 515 QLGNPKAKDR-SITVVEG-KLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGD 572
LG+ + +D V++ K K + +S+G H L S G VYTWGK G LG GD
Sbjct: 300 CLGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVALDSNGRVYTWGKGYCGALGHGD 359
Query: 573 SQERETP 579
++ TP
Sbjct: 360 ENDKITP 366
Score = 236 (88.1 bits), Expect = 2.4e-16, P = 2.4e-16
Identities = 90/339 (26%), Positives = 138/339 (40%)
Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKL--VECLSGINVQSVSCGEF 324
I+ G H L+ +V+ G G L H + C +E V VS +
Sbjct: 116 IATGKYHTLLINNS-KVYSCGVSLSGVLAHG-SETTQCVAFTPIEFPFPAQVAQVSATQN 173
Query: 325 QTCALTKSGEIYTWGHNNHGADLVGER-RSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
+ + +SG++ T G N+ + G SR + P KL + L G +VA G T
Sbjct: 174 HSAFVLQSGQVLTCGDNS--SHCCGHLDTSRPIFRP-KLVEALKGTPCKQVAAGLHFTVF 230
Query: 384 VSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGL-KVKSVACGPWHTAAIVDIMVD 442
+S G +T G T G LGHG+ + PK VE L+ + V +A GP + A+
Sbjct: 231 LSREGHAYTCGSNTHGQLGHGDTLDRPVPKVVEFLKTIGPVVQIAAGPSYVLAVTQ---- 286
Query: 443 RCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVT--RLVDFDFVQASCGRMLTVGLT 500
G ++++G LGH + + +L P + + ++ S G V L
Sbjct: 287 -------DGSVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVALD 339
Query: 501 GLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
G+VYT G G LG+ D+ V L + + VL GG +Y +
Sbjct: 340 SNGRVYTWGKGYCGALGHGDENDKITPQVLVNLNNCLAVQVCARKRKTFVLVEGGLLYGF 399
Query: 561 GKNANGQLGLGD---SQERETPTFVEALRDRQVESVVCG 596
G G LG D S + P +E L+ +V V G
Sbjct: 400 GWMGFGSLGFPDRGVSDKVLRPRVLECLKPHRVSQVSTG 438
Score = 235 (87.8 bits), Expect = 3.1e-16, P = 3.1e-16
Identities = 69/272 (25%), Positives = 123/272 (45%)
Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
PKL+E+ + ++ G +++EG + G G+LGH +D PK+VE L
Sbjct: 207 PKLVEALKGTPCKQVAAGLHFTVFLSREGHAYTCGSNTHGQLGHGDTLDRPVPKVVEFLK 266
Query: 313 GIN-VQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL--FDTLDGV 369
I V ++ G A+T+ G +Y++G ++ +G + PR + F G+
Sbjct: 267 TIGPVVQIAAGPSYVLAVTQDGSVYSFGSGSNFC--LGHGEQQDELQPRVIQAFKR-KGI 323
Query: 370 RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACG 429
+ +V+ G+ H + ++G+++T+G G G LGHG+ + P+ + +L V
Sbjct: 324 HILRVSAGDEHAVALDSNGRVYTWGKGYCGALGHGDENDKITPQVLVNLNNCLAVQVCAR 383
Query: 430 PWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD---GERKLLPTCVTRLVDFDF 486
T +V+ GG L+ +G G LG D ++ L P + L
Sbjct: 384 KRKTFVLVE-----------GGLLYGFGWMGFGSLGFPDRGVSDKVLRPRVLECLKPHRV 432
Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
Q S G T+ +T G+++ G QLG+
Sbjct: 433 SQVSTGLYHTIVVTQRGRIFGFGDNERAQLGH 464
Score = 223 (83.6 bits), Expect = 6.6e-15, P = 6.6e-15
Identities = 71/250 (28%), Positives = 118/250 (47%)
Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLD-VQNISLGAKHAALVTKEGEVFCWGEGKDG 292
G G + T +D +PK++E + V I+ G + VT++G V+ +G G +
Sbjct: 241 GSNTHGQLGHGDT-LDRPVPKVVEFLKTIGPVVQIAAGPSYVLAVTQDGSVYSFGSGSNF 299
Query: 293 RLGHKVNMDVSCPKLVECLS--GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGE 350
LGH D P++++ GI++ VS G+ AL +G +YTWG GA +G
Sbjct: 300 CLGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVALDSNGRVYTWGKGYCGA--LGH 357
Query: 351 RRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLG---HGNLQ 407
P+ L + L+ +V + T ++ G L+ +G FG LG G
Sbjct: 358 GDENDKITPQVLVN-LNNCLAVQVCARKRKTFVLVEGGLLYGFGWMGFGSLGFPDRGVSD 416
Query: 408 NVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHV 467
V +P+ +E L+ +V V+ G +HT ++ R G++F +GD ++ +LGH
Sbjct: 417 KVLRPRVLECLKPHRVSQVSTGLYHTI----VVTQR-------GRIFGFGDNERAQLGH- 464
Query: 468 DGERKLL-PT 476
D R L PT
Sbjct: 465 DSLRGCLEPT 474
Score = 208 (78.3 bits), Expect = 2.9e-13, P = 2.9e-13
Identities = 68/237 (28%), Positives = 112/237 (47%)
Query: 373 KVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGN--LQNVSQPKEVESLRGLKVKSVACGP 430
++A G++HT +++ S ++++ G GVL HG+ Q V+ +E +V V+
Sbjct: 115 QIATGKYHTLLINNS-KVYSCGVSLSGVLAHGSETTQCVAFTP-IEFPFPAQVAQVSATQ 172
Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLL-PTCVTRLVDFDFVQA 489
H+A ++ G++ T GD GH+D R + P V L Q
Sbjct: 173 NHSAFVLQ-----------SGQVLTCGDNSSHCCGHLDTSRPIFRPKLVEALKGTPCKQV 221
Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEF-VKGISSGSYHV 548
+ G TV L+ G YT GS HGQLG+ DR + V LK V I++G +V
Sbjct: 222 AAGLHFTVFLSREGHAYTCGSNTHGQLGHGDTLDRPVPKVVEFLKTIGPVVQIAAGPSYV 281
Query: 549 AVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
+T GSVY++G +N LG G+ Q+ P ++A + + + + + A+ L
Sbjct: 282 LAVTQDGSVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVAL 338
Score = 200 (75.5 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 48/171 (28%), Positives = 86/171 (50%)
Query: 247 QVDALLPKLLESAVM--LDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC 304
Q D L P+++++ + + +S G +HA + G V+ WG+G G LGH D
Sbjct: 306 QQDELQPRVIQAFKRKGIHILRVSAGDEHAVALDSNGRVYTWGKGYCGALGHGDENDKIT 365
Query: 305 PKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFD 364
P+++ L+ V + +T L + G +Y +G G+ +R L ++ +
Sbjct: 366 PQVLVNLNNCLAVQVCARKRKTFVLVEGGLLYGFGWMGFGSLGFPDRGVSDKVLRPRVLE 425
Query: 365 TLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEV 415
L RVS+V+ G +HT +V+ G++F +GD LGH +L+ +P E+
Sbjct: 426 CLKPHRVSQVSTGLYHTIVVTQRGRIFGFGDNERAQLGHDSLRGCLEPTEI 476
Score = 134 (52.2 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 69/243 (28%), Positives = 111/243 (45%)
Query: 384 VSTSGQLFTYGDGTFGVLGHGNLQNVSQPKE-VESLRGLKVKSVACGPWHTAAIVDIMVD 442
++T +LF +G + L LQ+V Q + VE+ +G K++ +A G +HT I
Sbjct: 76 LTTQKELFANCEGNWKRL-FSFLQSVEQSSDMVETSQG-KMQ-IATGKYHTLLI------ 126
Query: 443 RCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF----VQASCGRMLTVG 498
+N+ K+++ G + G L H G T ++F F Q S + +
Sbjct: 127 ---NNS---KVYSCGVSLSGVLAH--GSETTQCVAFTP-IEFPFPAQVAQVSATQNHSAF 177
Query: 499 LTGLGKVYTMG-SAVH--GQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGG 555
+ G+V T G ++ H G L + R +VE LK K +++G + L+ G
Sbjct: 178 VLQSGQVLTCGDNSSHCCGHLDTSRPIFRP-KLVEA-LKGTPCKQVAAGLHFTVFLSREG 235
Query: 556 SVYTWGKNANGQLGLGDSQERETPTFVEALRD-RQVESVVCGSSITAAICLHKSI-SVGD 613
YT G N +GQLG GD+ +R P VE L+ V + G S A+ S+ S G
Sbjct: 236 HAYTCGSNTHGQLGHGDTLDRPVPKVVEFLKTIGPVVQIAAGPSYVLAVTQDGSVYSFGS 295
Query: 614 QSS 616
S+
Sbjct: 296 GSN 298
>UNIPROTKB|F1NUG6 [details] [associations]
symbol:Gga.50841 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005929
"cilium" evidence=IEA] [GO:0007601 "visual perception"
evidence=IEA] [GO:0042462 "eye photoreceptor cell development"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
GO:GO:0005929 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104160 EMBL:AADN02011054 IPI:IPI00586770
Ensembl:ENSGALT00000026211 OMA:ENGLMFT Uniprot:F1NUG6
Length = 720
Score = 321 (118.1 bits), Expect = 8.8e-26, Sum P(2) = 8.8e-26
Identities = 97/338 (28%), Positives = 161/338 (47%)
Query: 266 NISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQ 325
+IS G +H A+VT G+++ +G G+LG V P V+ L + CG
Sbjct: 41 HISCGDEHTAVVTGNGKLYMFGSNDWGQLGLGSKNTVRKPTCVKALKPEKTKLAVCGRNH 100
Query: 326 TCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVS 385
T T+ G +Y G N+ G +G+ R+ + F ++ ++A G + +A V+
Sbjct: 101 TLVYTEKGNVYAAGGNSEGQLGLGDTEERTTFHLISFFTNQH--KIKQLAAGSYTSAAVT 158
Query: 386 TSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCK 445
GQLF +GD + G +G + VS P +V+ G V S++CG +H+A I
Sbjct: 159 EDGQLFVWGDNSEGQIGLADKTCVSVPCQVDV--GKPVSSISCGYYHSAFITG------- 209
Query: 446 SNAIGGKLFTWGDADKGRLGHVDGERK--LLPTCVTRLVDFDFVQASCGRMLTVGLTGLG 503
G+L+T+G+ + G+LG + + K +P V +++ + +CG TV LT G
Sbjct: 210 ----DGELYTFGEPENGKLGLLPEQLKNSRVPQPVLGIME-KVNKVACGGEHTVVLTETG 264
Query: 504 KVYTMGSAVHGQLGNPKAKDRSITVVEGK-LKEEFVKGISSGSYHVAVL--TSGGSVYTW 560
VYT G +GQLG+ ++ K L+ + ++ G H AV+ T G ++T+
Sbjct: 265 -VYTFGLGQYGQLGHGTLLFKTSVPKSVKHLRSHKIHNVTCGESHTAVIADTENGLMFTF 323
Query: 561 GKNANGQLGLGDSQ--ERETPTFVEALRDRQVESVVCG 596
G +G+LGLG+ + P V V CG
Sbjct: 324 GDGRHGKLGLGEENFANQFDPALCSNFLSFTVLLVACG 361
Score = 318 (117.0 bits), Expect = 1.9e-25, Sum P(2) = 1.9e-25
Identities = 79/235 (33%), Positives = 128/235 (54%)
Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
++ ++ G+ +A VT++G++F WG+ +G++G VS P V+ G V S+SCG
Sbjct: 144 IKQLAAGSYTSAAVTEDGQLFVWGDNSEGQIGLADKTCVSVPCQVDV--GKPVSSISCGY 201
Query: 324 FQTCALTKSGEIYTWGHNNHGA-DLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTA 382
+ + +T GE+YT+G +G L+ E+ S +P+ + ++ +V+KVACG HT
Sbjct: 202 YHSAFITGDGELYTFGEPENGKLGLLPEQLKNSR-VPQPVLGIME--KVNKVACGGEHTV 258
Query: 383 IVSTSGQLFTYGDGTFGVLGHGNLQ-NVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMV 441
+++ +G ++T+G G +G LGHG L S PK V+ LR K+ +V CG HTA I D
Sbjct: 259 VLTETG-VYTFGLGQYGQLGHGTLLFKTSVPKSVKHLRSHKIHNVTCGESHTAVIADT-- 315
Query: 442 DRCKSNAIGGKLFTWGDADKGRLGHVDGERKLL----PTCVTRLVDFDFVQASCG 492
N G +FT+GD G+LG GE P + + F + +CG
Sbjct: 316 ----EN---GLMFTFGDGRHGKLGL--GEENFANQFDPALCSNFLSFTVLLVACG 361
Score = 269 (99.8 bits), Expect = 4.7e-20, Sum P(2) = 4.7e-20
Identities = 83/288 (28%), Positives = 134/288 (46%)
Query: 319 VSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGE 378
+SCG+ T +T +G++Y +G N+ G +G + + P + L + CG
Sbjct: 42 ISCGDEHTAVVTGNGKLYMFGSNDWGQLGLGSKNTVRK--PTCV-KALKPEKTKLAVCGR 98
Query: 379 WHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGL-KVKSVACGPWHTAAIV 437
HT + + G ++ G + G LG G+ + + + K+K +A G + +AA+
Sbjct: 99 NHTLVYTEKGNVYAAGGNSEGQLGLGDTEERTTFHLISFFTNQHKIKQLAAGSYTSAAVT 158
Query: 438 DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTV 497
+ G+LF WGD +G++G D +P V V SCG +
Sbjct: 159 E-----------DGQLFVWGDNSEGQIGLADKTCVSVPCQVD--VGKPVSSISCGYYHSA 205
Query: 498 GLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLK-EEFVKGISSGSYHVAVLTSGGS 556
+TG G++YT G +G+LG + ++ V + L E V ++ G H VLT G
Sbjct: 206 FITGDGELYTFGEPENGKLGLLPEQLKNSRVPQPVLGIMEKVNKVACGGEHTVVLTETG- 264
Query: 557 VYTWGKNANGQLGLGDSQ-ERETPTFVEALRDRQVESVVCGSSITAAI 603
VYT+G GQLG G + P V+ LR ++ +V CG S TA I
Sbjct: 265 VYTFGLGQYGQLGHGTLLFKTSVPKSVKHLRSHKIHNVTCGESHTAVI 312
Score = 230 (86.0 bits), Expect = 8.3e-16, Sum P(2) = 8.3e-16
Identities = 74/285 (25%), Positives = 133/285 (46%)
Query: 323 EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTA 382
E + + +SG ++T+G +N ++ P K + D + ++CG+ HTA
Sbjct: 4 EEEELPVPESGAVFTFGKSNFAENI-----------PSKFWFKND--KPVHISCGDEHTA 50
Query: 383 IVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
+V+ +G+L+ +G +G LG G+ V +P V++L+ K K CG HT +
Sbjct: 51 VVTGNGKLYMFGSNDWGQLGLGSKNTVRKPTCVKALKPEKTKLAVCGRNHTLVYTE---- 106
Query: 443 RCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFV-QASCGRMLTVGLTG 501
G ++ G +G+LG D E + ++ + + Q + G + +T
Sbjct: 107 -------KGNVYAAGGNSEGQLGLGDTEERTTFHLISFFTNQHKIKQLAAGSYTSAAVTE 159
Query: 502 LGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKE-EFVKGISSGSYHVAVLTSGGSVYTW 560
G+++ G GQ+G D++ V ++ + V IS G YH A +T G +YT+
Sbjct: 160 DGQLFVWGDNSEGQIG---LADKTCVSVPCQVDVGKPVSSISCGYYHSAFITGDGELYTF 216
Query: 561 GKNANGQLGLGDSQERET--PTFVEALRDRQVESVVCGSSITAAI 603
G+ NG+LGL Q + + P V + ++ V V CG T +
Sbjct: 217 GEPENGKLGLLPEQLKNSRVPQPVLGIMEK-VNKVACGGEHTVVL 260
Score = 213 (80.0 bits), Expect = 5.7e-14, Sum P(2) = 5.7e-14
Identities = 69/218 (31%), Positives = 108/218 (49%)
Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
+ +WG+ G IG A VS QVD P V +IS G H+A +T +
Sbjct: 163 LFVWGDNS-EGQIGLADKTCVSV-PCQVDVGKP----------VSSISCGYYHSAFITGD 210
Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGI--NVQSVSCGEFQTCALTKSGEIYTW 338
GE++ +GE ++G+LG + + ++ + + GI V V+CG T LT++G +YT+
Sbjct: 211 GELYTFGEPENGKLG-LLPEQLKNSRVPQPVLGIMEKVNKVACGGEHTVVLTETG-VYTF 268
Query: 339 GHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS--GQLFTYGDG 396
G +G G ++ +P+ + L ++ V CGE HTA+++ + G +FT+GDG
Sbjct: 269 GLGQYGQLGHGTLLFKTS-VPKSV-KHLRSHKIHNVTCGESHTAVIADTENGLMFTFGDG 326
Query: 397 TFGVLGHG--NLQNVSQPKEVESLRGLKVKSVACGPWH 432
G LG G N N P + V VACG H
Sbjct: 327 RHGKLGLGEENFANQFDPALCSNFLSFTVLLVACGGCH 364
Score = 178 (67.7 bits), Expect = 1.2e-09, Sum P(3) = 1.2e-09
Identities = 51/132 (38%), Positives = 68/132 (51%)
Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAVHGQLG-NPKAKDRSITVVEGKLKEEFVKGISSGS 545
V SCG T +TG GK+Y GS GQLG K R T V+ LK E K G
Sbjct: 40 VHISCGDEHTAVVTGNGKLYMFGSNDWGQLGLGSKNTVRKPTCVKA-LKPEKTKLAVCGR 98
Query: 546 YHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDR-QVESVVCGSSITAAIC 604
H V T G+VY G N+ GQLGLGD++ER T + ++ +++ + GS +AA+
Sbjct: 99 NHTLVYTEKGNVYAAGGNSEGQLGLGDTEERTTFHLISFFTNQHKIKQLAAGSYTSAAVT 158
Query: 605 LHKSISV-GDQS 615
+ V GD S
Sbjct: 159 EDGQLFVWGDNS 170
Score = 55 (24.4 bits), Expect = 8.8e-26, Sum P(2) = 8.8e-26
Identities = 24/95 (25%), Positives = 35/95 (36%)
Query: 877 SAAKEAKEGVDANLPPKLDTDKHPEVKLPKDRKVDSLCSSPIVFSNKLKSVYGRELCHDN 936
SA E D NL DT V + + SL SP+ K + G E +
Sbjct: 486 SAEDSDAENNDRNLGDTTDTLNMTHV-MRLNSSDQSLKLSPVQKQKKEEEEGGNEEEDEE 544
Query: 937 SSGSVEDSKVARTEPQQKGTKASKLEYAEQYEPGI 971
E+ E + K + +LE E+ E G+
Sbjct: 545 EEDKEEEEGEEMEEDEGKAEEEQELELEEENEEGV 579
Score = 44 (20.5 bits), Expect = 1.2e-24, Sum P(2) = 1.2e-24
Identities = 12/45 (26%), Positives = 24/45 (53%)
Query: 799 EKDLSESNKMLNEEVQRLRDQARNLEKQCQIGNQKVQECQQKIEE 843
EK+ E K EE + ++ +E+ + GN++ ++ Q+ EE
Sbjct: 614 EKEEGEEEKREQEEEEEGGEEEEEVEEVEEGGNEEDEDEGQEEEE 658
Score = 39 (18.8 bits), Expect = 1.2e-09, Sum P(3) = 1.2e-09
Identities = 33/157 (21%), Positives = 54/157 (34%)
Query: 647 KKIINASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQGSLSEEVKEE 706
K ++ + GKP Y H IT G L P N G L E++K
Sbjct: 179 KTCVSVPCQVDVGKPVSSISCGYYHSAFITGDGELYTFGE--PEN--GKLGLLPEQLKNS 234
Query: 707 KGALTPSRG-QSFTSKQSRNVERKPGECLESASSLSSGLQRWGQVSCPIRFKTHCHEKSV 765
+ P G +K + E L + GL ++GQ+ H +
Sbjct: 235 R-VPQPVLGIMEKVNKVACGGEHTV--VLTETGVYTFGLGQYGQLG---------HGTLL 282
Query: 766 EPTPIPKTQMSTHSPLLRKISLGSNFIPIASTVEKDL 802
T +PK+ S + ++ G + + + E L
Sbjct: 283 FKTSVPKSVKHLRSHKIHNVTCGESHTAVIADTENGL 319
>RGD|1308467 [details] [associations]
symbol:Rcbtb1 "regulator of chromosome condensation (RCC1) and
BTB (POZ) domain containing protein 1" species:10116 "Rattus
norvegicus" [GO:0005737 "cytoplasm" evidence=IEA;ISO]
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097
SMART:SM00225 RGD:1308467 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:CH474049
GeneTree:ENSGT00700000104208 CTD:55213 KO:K11494 OMA:NCSNCLG
OrthoDB:EOG4MSCXX IPI:IPI00364409 RefSeq:NP_001101850.1
UniGene:Rn.229110 Ensembl:ENSRNOT00000037800 GeneID:361050
KEGG:rno:361050 UCSC:RGD:1308467 NextBio:675026 Uniprot:D4AD40
Length = 531
Score = 321 (118.1 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 94/303 (31%), Positives = 144/303 (47%)
Query: 269 LGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCA 328
+ A A VT EVF +G LG N PK +E L G ++S+S G
Sbjct: 29 ISASEAIYVTDSDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKRIKSLSYGSGPHVL 88
Query: 329 L-TKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
L T+ G +Y WGHN G +G + P ++ L +V +VACG H+ ++
Sbjct: 89 LSTEDGVVYAWGHN--GYSQLGNGTTNQGIAPIQVCTNLLVKQVVEVACGSHHSMALAAD 146
Query: 388 GQLFTYGDGTFGVLGHGNLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
G+LF +G G +G G+ N P++V + L KV ++ACG + A++D
Sbjct: 147 GELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKKVVNIACGQTSSMAVLD-------- 198
Query: 447 NAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVY 506
G+++ WG G+LG + +L P V L Q CG T+ LT G +Y
Sbjct: 199 ---SGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHGVCVNQIVCGYAHTLALTDEGLLY 255
Query: 507 TMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISS-GSYHV-AVLTSGGSVYTWGKNA 564
G+ +GQLG +K+ ++ + +++E V I++ S H A T GG VY WG+
Sbjct: 256 AWGANTYGQLGTG-SKNNLLSPTQIMVEKERVIEIAACHSTHTSAAKTQGGHVYMWGQ-C 313
Query: 565 NGQ 567
GQ
Sbjct: 314 RGQ 316
Score = 277 (102.6 bits), Expect = 9.3e-21, P = 9.3e-21
Identities = 84/270 (31%), Positives = 128/270 (47%)
Query: 251 LLPKLLESAVMLDVQNISLGA-KHAALVTKEGEVFCWGEGKDGRLGH-KVNMDVSCPKLV 308
L+PK LE+ ++++S G+ H L T++G V+ WG +LG+ N ++ ++
Sbjct: 63 LVPKKLEALCGKRIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVC 122
Query: 309 ECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
L V V+CG + AL GE++ WG+NN G VG + + PRK+ + L
Sbjct: 123 TNLLVKQVVEVACGSHHSMALAADGELFAWGYNNCGQ--VGSGSTANQPTPRKVTNCLHT 180
Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
+V +ACG+ + V SG+++ +G G LG GN N P V +L G+ V + C
Sbjct: 181 KKVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHGVCVNQIVC 240
Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ 488
G HT A+ D G L+ WG G+LG L PT + +V+ + V
Sbjct: 241 GYAHTLALTD-----------EGLLYAWGANTYGQLGTGSKNNLLSPTQI--MVEKERVI 287
Query: 489 --ASCGRMLT-VGLTGLGKVYTMGSAVHGQ 515
A+C T T G VY G GQ
Sbjct: 288 EIAACHSTHTSAAKTQGGHVYMWGQC-RGQ 316
Score = 258 (95.9 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 79/277 (28%), Positives = 129/277 (46%)
Query: 329 LTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS- 387
+T S E++ +G N ++ +G ++S +P+KL + L G R+ ++ G ++ST
Sbjct: 37 VTDSDEVFVFGLNY--SNCLGTGDNQSTLVPKKL-EALCGKRIKSLSYGSGPHVLLSTED 93
Query: 388 GQLFTYGDGTFGVLGHGNLQNVSQPKEV-ESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
G ++ +G + LG+G P +V +L +V VACG H+ A+
Sbjct: 94 GVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLVKQVVEVACGSHHSMAL---------- 143
Query: 447 NAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFD-FVQASCGRMLTVGLTGLGKV 505
A G+LF WG + G++G + P VT + V +CG+ ++ + G+V
Sbjct: 144 -AADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKKVVNIACGQTSSMAVLDSGEV 202
Query: 506 YTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
Y G +GQLG ++ V L V I G H LT G +Y WG N
Sbjct: 203 YGWGYNGNGQLGLGNNGNQLTPVRVAALHGVCVNQIVCGYAHTLALTDEGLLYAWGANTY 262
Query: 566 GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
GQLG G +PT + ++R +E C S+ T+A
Sbjct: 263 GQLGTGSKNNLLSPTQIMVEKERVIEIAACHSTHTSA 299
Score = 253 (94.1 bits), Expect = 4.2e-18, P = 4.2e-18
Identities = 70/261 (26%), Positives = 127/261 (48%)
Query: 201 RLVTPTYGS-P--LIERKDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLE 257
R+ + +YGS P L+ +D + V WG +G +G+ +Q + L++
Sbjct: 75 RIKSLSYGSGPHVLLSTEDGV--VYAWGHNGYS-QLG---NGTTNQGIAPIQVCTNLLVK 128
Query: 258 SAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCP-KLVECLSGINV 316
V ++ G+ H+ + +GE+F WG G++G + P K+ CL V
Sbjct: 129 QVV-----EVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKKV 183
Query: 317 QSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC 376
+++CG+ + A+ SGE+Y WG+N +G +G + + P ++ L GV V+++ C
Sbjct: 184 VNIACGQTSSMAVLDSGEVYGWGYNGNGQ--LGLGNNGNQLTPVRVA-ALHGVCVNQIVC 240
Query: 377 GEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAI 436
G HT ++ G L+ +G T+G LG G+ N+ P ++ + ++ AC HT+A
Sbjct: 241 GYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLSPTQIMVEKERVIEIAACHSTHTSA- 299
Query: 437 VDIMVDRCKSNAIGGKLFTWG 457
K+ GG ++ WG
Sbjct: 300 -------AKTQ--GGHVYMWG 311
Score = 219 (82.2 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 69/223 (30%), Positives = 112/223 (50%)
Query: 384 VSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
V+ S ++F +G LG G+ Q+ PK++E+L G ++KS++ G + V + +
Sbjct: 37 VTDSDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKRIKSLSYG---SGPHVLLSTE- 92
Query: 444 CKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCV-TRLVDFDFVQASCGRMLTVGLTGL 502
G ++ WG +LG+ + + P V T L+ V+ +CG ++ L
Sbjct: 93 ------DGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLVKQVVEVACGSHHSMALAAD 146
Query: 503 GKVYTMGSAVHGQLGNPK-AKDRSITVVEGKLKEEFVKGISSG-SYHVAVLTSGGSVYTW 560
G+++ G GQ+G+ A + V L + V I+ G + +AVL SG VY W
Sbjct: 147 GELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKKVVNIACGQTSSMAVLDSG-EVYGW 205
Query: 561 GKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
G N NGQLGLG++ + TP V AL V +VCG + T A+
Sbjct: 206 GYNGNGQLGLGNNGNQLTPVRVAALHGVCVNQIVCGYAHTLAL 248
Score = 162 (62.1 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 47/145 (32%), Positives = 71/145 (48%)
Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
V NI+ G + V GEV+ WG +G+LG N + P V L G+ V + CG
Sbjct: 183 VVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHGVCVNQIVCGY 242
Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWL-PRKLFDTLDGVRVSKVA-CGEWHT 381
T ALT G +Y WG N +G G S+++ L P ++ ++ RV ++A C HT
Sbjct: 243 AHTLALTDEGLLYAWGANTYGQLGTG---SKNNLLSPTQIM--VEKERVIEIAACHSTHT 297
Query: 382 AIVSTSG-QLFTYGD--GTFGVLGH 403
+ T G ++ +G G +L H
Sbjct: 298 SAAKTQGGHVYMWGQCRGQSVILPH 322
>MGI|MGI:1914388 [details] [associations]
symbol:Herc6 "hect domain and RLD 6" species:10090 "Mus
musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;IBA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=ISO;IBA] [GO:0006464 "cellular protein modification
process" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0030332 "cyclin binding" evidence=ISO] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IBA] [GO:0045087 "innate immune response"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 MGI:MGI:1914388 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005829 GO:GO:0005634 GO:GO:0005737 GO:GO:0045087
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0042787 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
CTD:55008 OMA:HIFAGTY EMBL:AC127307 EMBL:AC142212 EMBL:AK017888
EMBL:AK149648 IPI:IPI00850197 RefSeq:NP_080268.1 UniGene:Mm.297393
ProteinModelPortal:F2Z461 SMR:F2Z461 PRIDE:F2Z461
Ensembl:ENSMUST00000031817 GeneID:67138 KEGG:mmu:67138
ChiTaRS:HERC6 NextBio:323692 Bgee:F2Z461 Uniprot:F2Z461
Length = 1003
Score = 326 (119.8 bits), Expect = 1.9e-25, P = 1.9e-25
Identities = 88/317 (27%), Positives = 162/317 (51%)
Query: 253 PKLLESAVM-LDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECL 311
P+ L++ +++ + G H+ L+ V+ G+ G+LG + + P+ ++ L
Sbjct: 12 PRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQAL 71
Query: 312 SGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRV 371
+ ++V VSCG+ + A+ G+++ WG + G +GE + S ++P K+ L G+++
Sbjct: 72 NDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEIS-FMPTKI-KALAGIKI 129
Query: 372 SKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVACGP 430
+V+CG +H+ +S G +F++G + G LG G N ++ + P++V+SL G+ + VA G
Sbjct: 130 IQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGG 189
Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRL---GHVDGERKLLPTCVTRLVDFDFV 487
H+ A+ ++ G F WG G+L G+ E+ P + L + +
Sbjct: 190 THSFAL-----------SLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVI 238
Query: 488 QASCGRMLTVGLTGLGKVYTMGSAVHGQLG-NPKAKDRSITVVEGKLKEEFVKGISSGSY 546
SCG T LT G+V+T G GQL +P++ R ++EG V I SY
Sbjct: 239 YISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRGPQLIEGIGGR--VSQIECASY 296
Query: 547 H-VAVLTSGGSVYTWGK 562
H +A + + G V + G+
Sbjct: 297 HTIAYVYTTGQVVSLGR 313
Score = 316 (116.3 bits), Expect = 2.3e-24, P = 2.3e-24
Identities = 92/297 (30%), Positives = 145/297 (48%)
Query: 312 SGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRV 371
SGI + + GE + L + +Y+ G N+ G +G+RR +S P + L+ + V
Sbjct: 20 SGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQ--LGQRRDQSTERPEPI-QALNDLHV 76
Query: 372 SKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVS-QPKEVESLRGLKVKSVACGP 430
V+CG+ H+ V G++F +G G+ G LG G + +S P ++++L G+K+ V+CG
Sbjct: 77 DLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGH 136
Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGER-KLLPTCVTRLVDFDFVQA 489
+H+ A+ + G +F+WG +G+LG R + +P V L Q
Sbjct: 137 YHSLALSE-----------DGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQV 185
Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQL---GNPKAKDRSITVVE-GKLKEEFVKGISSGS 545
+ G + L+ G + GS GQL GN K K++ G LK V IS G
Sbjct: 186 AAGGTHSFALSLTGTSFGWGSNRSGQLALSGN-KVKEQIYKPHSIGALKNLSVIYISCGY 244
Query: 546 YHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
H AVLT G V+T+G N++GQL + P +E + R V + C S T A
Sbjct: 245 EHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRGPQLIEGIGGR-VSQIECASYHTIA 300
Score = 281 (104.0 bits), Expect = 1.4e-20, P = 1.4e-20
Identities = 74/264 (28%), Positives = 133/264 (50%)
Query: 359 PRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESL 418
PR+L G+ + + A GE H+ ++ ++ ++++ GD ++G LG Q+ +P+ +++L
Sbjct: 12 PRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQAL 71
Query: 419 RGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD-GERKLLPTC 477
L V V+CG H+ A+ C GK+F WG +G+LG + E +PT
Sbjct: 72 NDLHVDLVSCGKEHSVAV-------CHK----GKVFAWGAGSEGQLGIGEFKEISFMPTK 120
Query: 478 VTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK-AKDRSITVVEGKLKEE 536
+ L +Q SCG ++ L+ G V++ G GQLG K ++ ++I L+
Sbjct: 121 IKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGI 180
Query: 537 FVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET---PTFVEALRDRQVESV 593
+ +++G H L+ G+ + WG N +GQL L ++ +E P + AL++ V +
Sbjct: 181 PLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYI 240
Query: 594 VCGSSITAAICLHKSI-SVGDQSS 616
CG TA + + + G SS
Sbjct: 241 SCGYEHTAVLTEEGQVFTFGGNSS 264
Score = 241 (89.9 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 55/206 (26%), Positives = 102/206 (49%)
Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
G +G + + + + +P +++ + + +S G H+ ++++G VF WG +G+
Sbjct: 99 GAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQ 158
Query: 294 LG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGA-DLVGER 351
LG K + + P+ V+ L GI + V+ G + AL+ +G + WG N G L G +
Sbjct: 159 LGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNK 218
Query: 352 RSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQ 411
+ P + L + V ++CG HTA+++ GQ+FT+G + G L
Sbjct: 219 VKEQIYKPHSI-GALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRG 277
Query: 412 PKEVESLRGLKVKSVACGPWHTAAIV 437
P+ +E + G +V + C +HT A V
Sbjct: 278 PQLIEGIGG-RVSQIECASYHTIAYV 302
>ZFIN|ZDB-GENE-030131-7951 [details] [associations]
symbol:rcbtb1 "regulator of chromosome
condensation (RCC1) and BTB (POZ) domain containing protein 1"
species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651
PROSITE:PS50097 SMART:SM00225 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-030131-7951 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
CTD:55213 HOVERGEN:HBG053261 KO:K11494 HSSP:O87916 EMBL:BC045877
IPI:IPI00503126 RefSeq:NP_956285.1 UniGene:Dr.5968
ProteinModelPortal:Q7ZVG0 GeneID:336007 KEGG:dre:336007
InParanoid:Q7ZVG0 NextBio:20811137 ArrayExpress:Q7ZVG0
Uniprot:Q7ZVG0
Length = 531
Score = 318 (117.0 bits), Expect = 2.4e-25, P = 2.4e-25
Identities = 88/300 (29%), Positives = 140/300 (46%)
Query: 271 AKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCAL- 329
A A +T + EV+ G LG + PK ++CLSG + S+S G L
Sbjct: 31 ANEAIYITHDDEVYVLGLNCSNCLGTGDSQSTIAPKKLDCLSGKKLISLSYGSGPHVLLV 90
Query: 330 TKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQ 389
T+ GE+Y WGHN G +G + P + L G RV++V+CG H+ ++ G+
Sbjct: 91 TEDGELYAWGHN--GYSQLGNGTTNQGVSPILVSTNLQGKRVTEVSCGSHHSLALTHEGE 148
Query: 390 LFTYGDGTFGVLGHGNLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCKSNA 448
+F +G G +G G+ N P++V + L+ + ++ACG + A+ D
Sbjct: 149 VFAWGYNNCGQVGSGSTANQPTPRKVSNCLQNKVIVNIACGQTSSMAVTD---------- 198
Query: 449 IGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTM 508
G+++ WG G+LG + +L P + L F +Q + G ++ LT G +Y
Sbjct: 199 -NGEVYGWGYNGNGQLGLGNNGNQLTPCRLIALQGFCVLQIASGYAHSLALTDEGLLYAW 257
Query: 509 GSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHV-AVLTSGGSVYTWGKNANGQ 567
G+ +GQLG ++ V KE V+ + S H A T G VY WG+ GQ
Sbjct: 258 GANTYGQLGTGNKSNQLSPVQVMTEKERIVEIAACHSTHTSAAKTQSGQVYMWGQ-CRGQ 316
Score = 282 (104.3 bits), Expect = 2.6e-21, P = 2.6e-21
Identities = 85/269 (31%), Positives = 128/269 (47%)
Query: 251 LLPKLLESAVMLDVQNISLGA-KHAALVTKEGEVFCWGEGKDGRLGH-KVNMDVSCPKLV 308
+ PK L+ + ++S G+ H LVT++GE++ WG +LG+ N VS P LV
Sbjct: 63 IAPKKLDCLSGKKLISLSYGSGPHVLLVTEDGELYAWGHNGYSQLGNGTTNQGVS-PILV 121
Query: 309 EC-LSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLD 367
L G V VSCG + ALT GE++ WG+NN G VG + + PRK+ + L
Sbjct: 122 STNLQGKRVTEVSCGSHHSLALTHEGEVFAWGYNNCGQ--VGSGSTANQPTPRKVSNCLQ 179
Query: 368 GVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVA 427
+ +ACG+ + V+ +G+++ +G G LG GN N P + +L+G V +A
Sbjct: 180 NKVIVNIACGQTSSMAVTDNGEVYGWGYNGNGQLGLGNNGNQLTPCRLIALQGFCVLQIA 239
Query: 428 CGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFV 487
G H+ A+ D G L+ WG G+LG + +L P V +
Sbjct: 240 SGYAHSLALTD-----------EGLLYAWGANTYGQLGTGNKSNQLSPVQVMTEKERIVE 288
Query: 488 QASCGRMLT-VGLTGLGKVYTMGSAVHGQ 515
A+C T T G+VY G GQ
Sbjct: 289 IAACHSTHTSAAKTQSGQVYMWGQC-RGQ 316
Score = 269 (99.8 bits), Expect = 7.1e-20, P = 7.1e-20
Identities = 89/297 (29%), Positives = 140/297 (47%)
Query: 329 LTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEW-HTAIVSTS 387
+T E+Y G N ++ +G S+S P+KL D L G ++ ++ G H +V+
Sbjct: 37 ITHDDEVYVLGLNC--SNCLGTGDSQSTIAPKKL-DCLSGKKLISLSYGSGPHVLLVTED 93
Query: 388 GQLFTYGDGTFGVLGHGNL-QNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
G+L+ +G + LG+G Q VS +L+G +V V+CG H+ A+
Sbjct: 94 GELYAWGHNGYSQLGNGTTNQGVSPILVSTNLQGKRVTEVSCGSHHSLALTH-------- 145
Query: 447 NAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTR-LVDFDFVQASCGRMLTVGLTGLGKV 505
G++F WG + G++G + P V+ L + V +CG+ ++ +T G+V
Sbjct: 146 ---EGEVFAWGYNNCGQVGSGSTANQPTPRKVSNCLQNKVIVNIACGQTSSMAVTDNGEV 202
Query: 506 YTMGSAVHGQLGNPKAKDRSITVVEGKLKEEF-VKGISSGSYHVAVLTSGGSVYTWGKNA 564
Y G +GQLG +T + F V I+SG H LT G +Y WG N
Sbjct: 203 YGWGYNGNGQLGLGN-NGNQLTPCRLIALQGFCVLQIASGYAHSLALTDEGLLYAWGANT 261
Query: 565 NGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCR 621
GQLG G+ + +P V ++R VE C S+ T+A K+ S G QCR
Sbjct: 262 YGQLGTGNKSNQLSPVQVMTEKERIVEIAACHSTHTSAA---KTQS-GQVYMWGQCR 314
Score = 162 (62.1 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 54/187 (28%), Positives = 84/187 (44%)
Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
+V WG G +G GS + T + L++ V++ NI+ G + VT
Sbjct: 148 EVFAWGYNNCG-QVGS---GSTANQPTP--RKVSNCLQNKVIV---NIACGQTSSMAVTD 198
Query: 280 EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
GEV+ WG +G+LG N + P + L G V ++ G + ALT G +Y WG
Sbjct: 199 NGEVYGWGYNGNGQLGLGNNGNQLTPCRLIALQGFCVLQIASGYAHSLALTDEGLLYAWG 258
Query: 340 HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVST-SGQLFTYGD--G 396
N +G +G + P ++ + + V AC HT+ T SGQ++ +G G
Sbjct: 259 ANTYGQ--LGTGNKSNQLSPVQVMTEKERI-VEIAACHSTHTSAAKTQSGQVYMWGQCRG 315
Query: 397 TFGVLGH 403
VL H
Sbjct: 316 QAIVLPH 322
>MGI|MGI:1918580 [details] [associations]
symbol:Rcbtb1 "regulator of chromosome condensation (RCC1)
and BTB (POZ) domain containing protein 1" species:10090 "Mus
musculus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] InterPro:IPR000210 InterPro:IPR013069
Pfam:PF00651 PROSITE:PS50097 SMART:SM00225 MGI:MGI:1918580
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
GO:GO:0006355 GO:GO:0006351 GO:GO:0016568 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0007049 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GeneTree:ENSGT00700000104208 CTD:55213 HOGENOM:HOG000065752
HOVERGEN:HBG053261 KO:K11494 OrthoDB:EOG4MSCXX EMBL:AK033501
EMBL:AK088299 EMBL:BC067005 IPI:IPI00469440 RefSeq:NP_082040.2
UniGene:Mm.234195 ProteinModelPortal:Q6NXM2 SMR:Q6NXM2
IntAct:Q6NXM2 STRING:Q6NXM2 PhosphoSite:Q6NXM2 PaxDb:Q6NXM2
PRIDE:Q6NXM2 Ensembl:ENSMUST00000022551 Ensembl:ENSMUST00000043227
GeneID:71330 KEGG:mmu:71330 UCSC:uc007ueb.2 InParanoid:Q6NXM2
NextBio:333557 Bgee:Q6NXM2 Genevestigator:Q6NXM2
GermOnline:ENSMUSG00000035469 Uniprot:Q6NXM2
Length = 531
Score = 316 (116.3 bits), Expect = 4.1e-25, P = 4.1e-25
Identities = 93/301 (30%), Positives = 143/301 (47%)
Query: 271 AKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALT 330
A A VT EVF +G LG N PK +E L G ++S+S G LT
Sbjct: 31 ANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLT 90
Query: 331 -KSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQ 389
+ G +Y WGHN G +G + P ++ L +V +VACG H+ ++ G+
Sbjct: 91 TEDGVVYAWGHN--GYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGE 148
Query: 390 LFTYGDGTFGVLGHGNLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCKSNA 448
LF +G G +G G+ N P++V + L +V ++ACG + A++D
Sbjct: 149 LFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLD---------- 198
Query: 449 IGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTM 508
G+++ WG G+LG + +L P V L Q CG T+ LT G +Y
Sbjct: 199 -SGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAW 257
Query: 509 GSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISS-GSYHV-AVLTSGGSVYTWGKNANG 566
G+ +GQLG +K+ ++ + +++E V I++ S H A T GG VY WG+ G
Sbjct: 258 GANTYGQLGTG-SKNNLLSPTQIMVEKERVIEIAACHSTHTSAAKTQGGHVYMWGQ-CRG 315
Query: 567 Q 567
Q
Sbjct: 316 Q 316
Score = 283 (104.7 bits), Expect = 2.0e-21, P = 2.0e-21
Identities = 85/270 (31%), Positives = 128/270 (47%)
Query: 251 LLPKLLESAVMLDVQNISLGA-KHAALVTKEGEVFCWGEGKDGRLGH-KVNMDVSCPKLV 308
L+PK LE+ ++++S G+ H L T++G V+ WG +LG+ N ++ ++
Sbjct: 63 LVPKKLEALCGKKIKSLSYGSGPHVLLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVC 122
Query: 309 ECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
L V V+CG + AL GE++ WG+NN G VG + + PRK+ + L
Sbjct: 123 TNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCGQ--VGSGSTANQPTPRKVTNCLHT 180
Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
RV +ACG+ + V SG+++ +G G LG GN N P V +L G+ V + C
Sbjct: 181 KRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVC 240
Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ 488
G HT A+ D G L+ WG G+LG L PT + +V+ + V
Sbjct: 241 GYAHTLALTD-----------EGLLYAWGANTYGQLGTGSKNNLLSPTQI--MVEKERVI 287
Query: 489 --ASCGRMLT-VGLTGLGKVYTMGSAVHGQ 515
A+C T T G VY G GQ
Sbjct: 288 EIAACHSTHTSAAKTQGGHVYMWGQC-RGQ 316
Score = 252 (93.8 bits), Expect = 5.3e-18, P = 5.3e-18
Identities = 76/277 (27%), Positives = 128/277 (46%)
Query: 329 LTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEW-HTAIVSTS 387
+T + E++ +G N ++ +G ++S +P+KL + L G ++ ++ G H + +
Sbjct: 37 VTDNDEVFVFGLNY--SNCLGTGDNQSTLVPKKL-EALCGKKIKSLSYGSGPHVLLTTED 93
Query: 388 GQLFTYGDGTFGVLGHGNLQNVSQPKEV-ESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
G ++ +G + LG+G P +V +L +V VACG H+ A+
Sbjct: 94 GVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMAL---------- 143
Query: 447 NAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFD-FVQASCGRMLTVGLTGLGKV 505
A G+LF WG + G++G + P VT + V +CG+ ++ + G+V
Sbjct: 144 -AADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEV 202
Query: 506 YTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
Y G +GQLG ++ V L V I G H LT G +Y WG N
Sbjct: 203 YGWGYNGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTY 262
Query: 566 GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
GQLG G +PT + ++R +E C S+ T+A
Sbjct: 263 GQLGTGSKNNLLSPTQIMVEKERVIEIAACHSTHTSA 299
Score = 248 (92.4 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 58/216 (26%), Positives = 109/216 (50%)
Query: 244 NKTQVDALLP-KLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDV 302
N T + P ++ + ++ V ++ G+ H+ + +GE+F WG G++G +
Sbjct: 109 NGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQ 168
Query: 303 SCP-KLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRK 361
P K+ CL V +++CG+ + A+ SGE+Y WG+N +G +G + + P +
Sbjct: 169 PTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQ--LGLGNNGNQLTPVR 226
Query: 362 LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGL 421
+ L G+ V+++ CG HT ++ G L+ +G T+G LG G+ N+ P ++ +
Sbjct: 227 VA-ALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLSPTQIMVEKER 285
Query: 422 KVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
++ AC HT+A K+ GG ++ WG
Sbjct: 286 VIEIAACHSTHTSA--------AKTQ--GGHVYMWG 311
Score = 221 (82.9 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 68/224 (30%), Positives = 110/224 (49%)
Query: 384 VSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPW-HTAAIVDIMVD 442
V+ + ++F +G LG G+ Q+ PK++E+L G K+KS++ G H +
Sbjct: 37 VTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLTTE---- 92
Query: 443 RCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCV-TRLVDFDFVQASCGRMLTVGLTG 501
G ++ WG +LG+ + + P V T L+ ++ +CG ++ L
Sbjct: 93 -------DGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAA 145
Query: 502 LGKVYTMGSAVHGQLGNPK-AKDRSITVVEGKLKEEFVKGISSG-SYHVAVLTSGGSVYT 559
G+++ G GQ+G+ A + V L + V I+ G + +AVL SG VY
Sbjct: 146 DGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSG-EVYG 204
Query: 560 WGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
WG N NGQLGLG++ + TP V AL V +VCG + T A+
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLAL 248
Score = 160 (61.4 bits), Expect = 5.9e-08, P = 5.9e-08
Identities = 47/145 (32%), Positives = 71/145 (48%)
Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
V NI+ G + V GEV+ WG +G+LG N + P V L G+ V + CG
Sbjct: 183 VVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGY 242
Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWL-PRKLFDTLDGVRVSKVA-CGEWHT 381
T ALT G +Y WG N +G G S+++ L P ++ ++ RV ++A C HT
Sbjct: 243 AHTLALTDEGLLYAWGANTYGQLGTG---SKNNLLSPTQIM--VEKERVIEIAACHSTHT 297
Query: 382 AIVSTSG-QLFTYGD--GTFGVLGH 403
+ T G ++ +G G +L H
Sbjct: 298 SAAKTQGGHVYMWGQCRGQSVILPH 322
>TAIR|locus:2076889 [details] [associations]
symbol:AT3G02510 "AT3G02510" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
[GO:0008536 "Ran GTPase binding" evidence=ISS] INTERPRO:IPR000408
Pfam:PF00415 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 UniGene:At.20016
UniGene:At.41128 EMBL:AK227929 IPI:IPI00539921 RefSeq:NP_186900.3
UniGene:At.70614 ProteinModelPortal:Q0WSJ9 SMR:Q0WSJ9 PRIDE:Q0WSJ9
EnsemblPlants:AT3G02510.1 GeneID:821100 KEGG:ath:AT3G02510
TAIR:At3g02510 OMA:NGGVQCW PhylomeDB:Q0WSJ9 Genevestigator:Q2V3Z2
Uniprot:Q0WSJ9
Length = 393
Score = 296 (109.3 bits), Expect = 5.6e-25, P = 5.6e-25
Identities = 90/350 (25%), Positives = 160/350 (45%)
Query: 234 GGAVDGS--VSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKD 291
G DG + N+ + A + + LE V+++ G++++ + +G +F WG +
Sbjct: 11 GSGEDGQLGIGTNEEKEWACVVEALEP---YSVRSVVSGSRNSLAICDDGTMFTWGWNQR 67
Query: 292 GRLGHKVNMDV-SCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGE 350
G LGH+ + P V+ L+ + + + G + A+ G Y WG N +G GE
Sbjct: 68 GTLGHQPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGGNEYGQ--CGE 125
Query: 351 RRSRSHW---LPRKLF---DTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHG 404
+ + R + + V +VA G H+ +++ G ++T+G G
Sbjct: 126 EPLKDEMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVLTREGHVWTWGQPW----PPG 181
Query: 405 NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRL 464
+++ +S P V+ L +++ +A G +H A+ + G+L WG+ + G+L
Sbjct: 182 DIKQISVPVRVQGLENVRL--IAVGAFHNLALEE-----------DGRLLAWGNNEYGQL 228
Query: 465 GHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDR 524
G D + P V L D V + G + LT G+VY G HG+LG D+
Sbjct: 229 GTGDTQPTSHPVPVQGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGLGD-NDK 287
Query: 525 SITVVEGK---LKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLG 571
S +V K L EE + +S G H LT G ++++G+ +G+LG G
Sbjct: 288 SSKMVPQKVNLLAEEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYG 337
Score = 291 (107.5 bits), Expect = 1.9e-24, P = 1.9e-24
Identities = 86/325 (26%), Positives = 148/325 (45%)
Query: 283 VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN 342
+ WG G+DG+LG N + +VE L +V+SV G + A+ G ++TWG N
Sbjct: 7 IIAWGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICDDGTMFTWGWNQ 66
Query: 343 HGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLG 402
G L + +++ +P ++ L V++++ A G WH V G+ + +G +G G
Sbjct: 67 RGT-LGHQPETKTENIPSRV-KALANVKITQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG 124
Query: 403 HGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA-DK 461
L++ + V R + + C P T V G ++TWG
Sbjct: 125 EEPLKD-EMGRPVR--RDIVIPK-RCAPKLTVRQVAAGGTHSVVLTREGHVWTWGQPWPP 180
Query: 462 GRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA 521
G + + +P V L + + + G + L G++ G+ +GQLG
Sbjct: 181 GDIKQIS-----VPVRVQGLENVRLI--AVGAFHNLALEEDGRLLAWGNNEYGQLGTGDT 233
Query: 522 KDRSITV-VEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQE--RET 578
+ S V V+G L + + I++G +H LT G VY WG+ +G+LGLGD+ + +
Sbjct: 234 QPTSHPVPVQG-LDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGLGDNDKSSKMV 292
Query: 579 PTFVEALRDRQVESVVCGSSITAAI 603
P V L + + V CG + + A+
Sbjct: 293 PQKVNLLAEEDIIQVSCGGTHSVAL 317
Score = 235 (87.8 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 58/192 (30%), Positives = 96/192 (50%)
Query: 263 DVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCG 322
+V+ I++GA H + ++G + WG + G+LG S P V+ L + + ++ G
Sbjct: 197 NVRLIAVGAFHNLALEEDGRLLAWGNNEYGQLGTGDTQPTSHPVPVQGLDDLTLVDIAAG 256
Query: 323 EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTA 382
+ + ALT GE+Y WG HG +G+ S +P+K+ + L + +V+CG H+
Sbjct: 257 GWHSTALTDKGEVYGWGRGEHGRLGLGDNDKSSKMVPQKV-NLLAEEDIIQVSCGGTHSV 315
Query: 383 IVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEV---------------ESLRGL-KVKSV 426
++ G++F++G G G LG+G QP E+ E G KS+
Sbjct: 316 ALTRDGRIFSFGRGDHGRLGYGRKVTTGQPLELPIKIPPPEGSFNHTDEEEEGKWSAKSI 375
Query: 427 ACGPWHTAAIVD 438
ACG HT AIV+
Sbjct: 376 ACGGRHTLAIVE 387
Score = 178 (67.7 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 59/216 (27%), Positives = 96/216 (44%)
Query: 386 TSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCK 445
T+ + +G G G LG G + VE+L V+SV G ++ AI D
Sbjct: 3 TATSIIAWGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICD------- 55
Query: 446 SNAIGGKLFTWGDADKGRLGHV-DGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
G +FTWG +G LGH + + + +P+ V L + QA+ G + + G+
Sbjct: 56 ----DGTMFTWGWNQRGTLGHQPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGR 111
Query: 505 VYTMGSAVHGQLGNPKAKD-------RSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSV 557
Y G +GQ G KD R I + + + V+ +++G H VLT G V
Sbjct: 112 AYAWGGNEYGQCGEEPLKDEMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVLTREGHV 171
Query: 558 YTWGKNANGQLGLGDSQERETPTFVEALRDRQVESV 593
+TWG+ GD ++ P V+ L + ++ +V
Sbjct: 172 WTWGQ----PWPPGDIKQISVPVRVQGLENVRLIAV 203
Score = 149 (57.5 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 47/139 (33%), Positives = 70/139 (50%)
Query: 262 LDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVS--CPKLVECLSGINVQSV 319
L + +I+ G H+ +T +GEV+ WG G+ GRLG N S P+ V L+ ++ V
Sbjct: 248 LTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGLGDNDKSSKMVPQKVNLLAEEDIIQV 307
Query: 320 SCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSH--WLPRKL------FDTLDGVRV 371
SCG + ALT+ G I+++G +HG G + + LP K+ F+ D
Sbjct: 308 SCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQPLELPIKIPPPEGSFNHTDEEEE 367
Query: 372 SK-----VACGEWHT-AIV 384
K +ACG HT AIV
Sbjct: 368 GKWSAKSIACGGRHTLAIV 386
>UNIPROTKB|E1BRZ2 [details] [associations]
symbol:NEK8 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0072372
"primary cilium" evidence=IEA] InterPro:IPR000719
InterPro:IPR002290 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0072372 PRINTS:PR00633
PROSITE:PS50012 GeneTree:ENSGT00700000104137 OMA:EREVFAW
EMBL:AADN02025864 IPI:IPI00574044 ProteinModelPortal:E1BRZ2
Ensembl:ENSGALT00000006340 Uniprot:E1BRZ2
Length = 689
Score = 317 (116.6 bits), Expect = 8.2e-25, P = 8.2e-25
Identities = 97/306 (31%), Positives = 135/306 (44%)
Query: 316 VQSVSCGEFQTCALTKSGEIYTWGH----NNHGADLVGERRSRSHWLPRKLFDTLDGVRV 371
V VS G Q +TKSG + W G L G + + GV +
Sbjct: 340 VVQVSAGRTQKAGVTKSGRLIMWEAPPMGTAGGPSLPGATEQLQPQFVSRFLEGQSGVTI 399
Query: 372 SKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPW 431
V+CG+ TA ++ G + T+G G+ G LGHGN +VSQPK VE+L G ++ VACG
Sbjct: 400 KHVSCGDLFTACLTDRGIIMTFGSGSNGCLGHGNFTDVSQPKIVEALLGYEMVQVACGAS 459
Query: 432 HTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASC 491
H A+ SN ++F WG D GRLG E P V + + + C
Sbjct: 460 HVLAV---------SNE--REVFAWGRGDNGRLGLGTLECHNSPQQVAVPPEHEAQRVIC 508
Query: 492 GRMLTVGLTGLGKVYTMGSAVHGQLG--------NPKAKDR--SITVV----EGKLKEEF 537
G ++ LT ++ GS +LG P +D+ TV L +E
Sbjct: 509 GIDSSMVLTVNNQILACGSNRCNKLGLDRISSAEEPSPEDQVEEATVFTCAQSAPLNQEP 568
Query: 538 VKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGS 597
V G+ H A +T+ G YT+G N +GQLG + P V LR +V V CG
Sbjct: 569 VVCADIGTAHSAAVTASGQCYTFGSNQHGQLGTNSCRNSRVPHLVVGLRAMKVTVVACGD 628
Query: 598 SITAAI 603
+ T AI
Sbjct: 629 AFTVAI 634
Score = 281 (104.0 bits), Expect = 6.9e-21, P = 6.9e-21
Identities = 107/389 (27%), Positives = 161/389 (41%)
Query: 227 GVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCW 286
GV GG + +S T + L + +V +S G A VTK G + W
Sbjct: 303 GVRGGSARTGIPPPLSSIYTWGSGITTPLRLPMLNTEVVQVSAGRTQKAGVTKSGRLIMW 362
Query: 287 GEGKDGRLGHKVNMDVS---CPKLV----ECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
G G + P+ V E SG+ ++ VSCG+ T LT G I T+G
Sbjct: 363 EAPPMGTAGGPSLPGATEQLQPQFVSRFLEGQSGVTIKHVSCGDLFTACLTDRGIIMTFG 422
Query: 340 HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
++G +G P K+ + L G + +VACG H VS ++F +G G G
Sbjct: 423 SGSNGC--LGHGNFTDVSQP-KIVEALLGYEMVQVACGASHVLAVSNEREVFAWGRGDNG 479
Query: 400 VLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAI-VDIMVDRCKSNAIGGKLFTWGD 458
LG G L+ + P++V + + V CG + + V+ + C SN KL
Sbjct: 480 RLGLGTLECHNSPQQVAVPPEHEAQRVICGIDSSMVLTVNNQILACGSNRCN-KLGLDRI 538
Query: 459 ADKGRLGHVDG-ERKLLPTCVTR--LVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQ 515
+ D E + TC L V A G + +T G+ YT GS HGQ
Sbjct: 539 SSAEEPSPEDQVEEATVFTCAQSAPLNQEPVVCADIGTAHSAAVTASGQCYTFGSNQHGQ 598
Query: 516 LGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQE 575
LG ++ + + L+ V ++ G + + G V TWGK A G+LG D +
Sbjct: 599 LGTNSCRNSRVPHLVVGLRAMKVTVVACGDAFTVAIGADGEVCTWGKGARGRLGRKDEET 658
Query: 576 -RETPTFVEALRDRQVESVVC--GSSITA 601
P +E V SV C G+++ A
Sbjct: 659 GMPRPVQLEETHPYVVTSVACCHGNTLLA 687
Score = 260 (96.6 bits), Expect = 1.3e-18, P = 1.3e-18
Identities = 73/300 (24%), Positives = 132/300 (44%)
Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
+++W +G G ++ G+ Q + Q + + LE + ++++S G A +T
Sbjct: 359 LIMWEAPPMGTAGGPSLPGATEQLQPQ---FVSRFLEGQSGVTIKHVSCGDLFTACLTDR 415
Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
G + +G G +G LGH DVS PK+VE L G + V+CG A++ E++ WG
Sbjct: 416 GIIMTFGSGSNGCLGHGNFTDVSQPKIVEALLGYEMVQVACGASHVLAVSNEREVFAWGR 475
Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
++G +G H P+++ + +V CG + +++ + Q+ G
Sbjct: 476 GDNGR--LGLGTLECHNSPQQVAVPPEH-EAQRVICGIDSSMVLTVNNQILACGSNRCNK 532
Query: 401 LGHGNLQNVSQPKEVESLRGLKVKSVA-CGPWHTAAIVDIMVDRCKSNAI--GGKLFTWG 457
LG + + +P + + V + A P + +V + S A+ G+ +T+G
Sbjct: 533 LGLDRISSAEEPSPEDQVEEATVFTCAQSAPLNQEPVVCADIGTAHSAAVTASGQCYTFG 592
Query: 458 DADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG 517
G+LG +P V L +CG TV + G+V T G G+LG
Sbjct: 593 SNQHGQLGTNSCRNSRVPHLVVGLRAMKVTVVACGDAFTVAIGADGEVCTWGKGARGRLG 652
Score = 182 (69.1 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 52/200 (26%), Positives = 90/200 (45%)
Query: 430 PWHTAAIVDIMVDRCKSNAI--GGKLFTWGDADKGRLG--HVDGE-RKLLPTCVTRLVD- 483
P +V + R + + G+L W G G + G +L P V+R ++
Sbjct: 334 PMLNTEVVQVSAGRTQKAGVTKSGRLIMWEAPPMGTAGGPSLPGATEQLQPQFVSRFLEG 393
Query: 484 ---FDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSIT-VVEGKLKEEFVK 539
SCG + T LT G + T GS +G LG+ D S +VE L E V+
Sbjct: 394 QSGVTIKHVSCGDLFTACLTDRGIIMTFGSGSNGCLGHGNFTDVSQPKIVEALLGYEMVQ 453
Query: 540 GISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSI 599
++ G+ HV +++ V+ WG+ NG+LGLG + +P V + + + V+CG
Sbjct: 454 -VACGASHVLAVSNEREVFAWGRGDNGRLGLGTLECHNSPQQVAVPPEHEAQRVICGIDS 512
Query: 600 TAAICLHKSISVGDQSSCSQ 619
+ + ++ I + C++
Sbjct: 513 SMVLTVNNQILACGSNRCNK 532
>UNIPROTKB|F1PV11 [details] [associations]
symbol:RCBTB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097
SMART:SM00225 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104208 CTD:55213 KO:K11494 OMA:NCSNCLG
EMBL:AAEX03013105 RefSeq:XP_542558.2 Ensembl:ENSCAFT00000006979
GeneID:485440 KEGG:cfa:485440 Uniprot:F1PV11
Length = 531
Score = 310 (114.2 bits), Expect = 1.9e-24, P = 1.9e-24
Identities = 92/301 (30%), Positives = 140/301 (46%)
Query: 271 AKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCAL- 329
A A VT EVF +G LG N PK +E L G ++S+S G L
Sbjct: 31 ANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLS 90
Query: 330 TKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQ 389
T+ G +Y WGHN G +G + P ++ L +V +VACG H+ ++ G+
Sbjct: 91 TEDGVVYAWGHN--GYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGE 148
Query: 390 LFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLK-VKSVACGPWHTAAIVDIMVDRCKSNA 448
+F +G G +G G+ N P++V + +K V +ACG + A++D
Sbjct: 149 VFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIKRVVGIACGQTSSMAVLD---------- 198
Query: 449 IGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTM 508
G+++ WG G+LG + +L P V L Q CG T+ LT G +Y
Sbjct: 199 -NGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAW 257
Query: 509 GSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISS-GSYHV-AVLTSGGSVYTWGKNANG 566
G+ +GQLG K+ ++ +++E V I++ S H A T GG VY WG+ G
Sbjct: 258 GANTYGQLGTGN-KNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ-CRG 315
Query: 567 Q 567
Q
Sbjct: 316 Q 316
Score = 265 (98.3 bits), Expect = 2.0e-19, P = 2.0e-19
Identities = 82/270 (30%), Positives = 127/270 (47%)
Query: 251 LLPKLLESAVMLDVQNISLGA-KHAALVTKEGEVFCWGEGKDGRLGH-KVNMDVSCPKLV 308
L+PK LE+ ++++S G+ H L T++G V+ WG +LG+ N ++ ++
Sbjct: 63 LVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVC 122
Query: 309 ECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
L V V+CG + AL GE++ WG+NN G VG + + PRK+ + L
Sbjct: 123 TNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQ--VGSGSTTNQPTPRKVTNCLHI 180
Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
RV +ACG+ + V +G+++ +G G LG GN N P V +L + V + C
Sbjct: 181 KRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVC 240
Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ 488
G HT A+ D G L+ WG G+LG + L P + +V+ + V
Sbjct: 241 GYAHTLALTD-----------EGLLYAWGANTYGQLGTGNKNNLLSPAHI--MVEKERVV 287
Query: 489 --ASCGRMLT-VGLTGLGKVYTMGSAVHGQ 515
A+C T T G VY G GQ
Sbjct: 288 EIAACHSAHTSAAKTQGGHVYMWGQC-RGQ 316
Score = 248 (92.4 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 76/277 (27%), Positives = 129/277 (46%)
Query: 329 LTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS- 387
+T + E++ +G N ++ +G ++S +P+KL + L G ++ ++ G ++ST
Sbjct: 37 VTDNDEVFVFGLNY--SNCLGTGDNQSTLVPKKL-EALCGKKIKSLSYGSGPHVLLSTED 93
Query: 388 GQLFTYGDGTFGVLGHGNLQNVSQPKEV-ESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
G ++ +G + LG+G P +V +L +V VACG H+ A+
Sbjct: 94 GVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMAL---------- 143
Query: 447 NAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFD-FVQASCGRMLTVGLTGLGKV 505
A G++F WG + G++G + P VT + V +CG+ ++ + G+V
Sbjct: 144 -AADGEVFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEV 202
Query: 506 YTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
Y G +GQLG ++ V L V I G H LT G +Y WG N
Sbjct: 203 YGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTY 262
Query: 566 GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
GQLG G+ +P + ++R VE C S+ T+A
Sbjct: 263 GQLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSA 299
Score = 224 (83.9 bits), Expect = 6.3e-15, P = 6.3e-15
Identities = 66/222 (29%), Positives = 108/222 (48%)
Query: 384 VSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
V+ + ++F +G LG G+ Q+ PK++E+L G K+KS++ G + V + +
Sbjct: 37 VTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYG---SGPHVLLSTE- 92
Query: 444 CKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCV-TRLVDFDFVQASCGRMLTVGLTGL 502
G ++ WG +LG+ + + P V T L+ V+ +CG ++ L
Sbjct: 93 ------DGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAAD 146
Query: 503 GKVYTMGSAVHGQLGNPKAKDRSIT-VVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWG 561
G+V+ G GQ+G+ ++ V L + V GI+ G + G VY WG
Sbjct: 147 GEVFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWG 206
Query: 562 KNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
N NGQLGLG++ + TP V AL V +VCG + T A+
Sbjct: 207 YNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLAL 248
Score = 153 (58.9 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 53/188 (28%), Positives = 79/188 (42%)
Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLD-VQNISLGAKHAALVT 278
+V WG G +G GS + T P+ + + + + V I+ G + V
Sbjct: 148 EVFAWGYNNCG-QVGS---GSTTNQPT------PRKVTNCLHIKRVVGIACGQTSSMAVL 197
Query: 279 KEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTW 338
GEV+ WG +G+LG N + P V L + V + CG T ALT G +Y W
Sbjct: 198 DNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAW 257
Query: 339 GHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSG-QLFTYGD-- 395
G N +G +G + P + + V V AC HT+ T G ++ +G
Sbjct: 258 GANTYGQ--LGTGNKNNLLSPAHIMVEKERV-VEIAACHSAHTSAAKTQGGHVYMWGQCR 314
Query: 396 GTFGVLGH 403
G VL H
Sbjct: 315 GQSVVLPH 322
>UNIPROTKB|E1BVG2 [details] [associations]
symbol:RCBTB1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097
SMART:SM00225 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104208 OMA:NCSNCLG EMBL:AADN02005390
IPI:IPI00590638 Ensembl:ENSGALT00000027473 Uniprot:E1BVG2
Length = 531
Score = 309 (113.8 bits), Expect = 2.5e-24, P = 2.5e-24
Identities = 91/301 (30%), Positives = 139/301 (46%)
Query: 271 AKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCAL- 329
A A T EVF +G LG + PK +E L G + S+S G L
Sbjct: 31 ANEAIYTTHNDEVFVFGLNCSNCLGTGDSQSTIVPKKLEALCGKKISSLSYGSGPHVLLC 90
Query: 330 TKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQ 389
T+ GE+Y WGHN G +G + P ++ L +V +VACG H+ +S G
Sbjct: 91 TEDGEVYAWGHN--GYSQLGNGATNQGVTPVQVCTNLLLKKVIEVACGSHHSMALSFDGD 148
Query: 390 LFTYGDGTFGVLGHGNLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCKSNA 448
L+ +G G +G G+ N P+ V + L+ V +ACG + A+V+
Sbjct: 149 LYAWGYNNCGQVGSGSTANQPTPRRVSNCLQDKMVVGIACGQTSSMAVVN---------- 198
Query: 449 IGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTM 508
G+++ WG G+LG + +L P V L +Q +CG T+ LT G +Y
Sbjct: 199 -NGEVYGWGYNGNGQLGLGNNGNQLTPCRVAALHGVCILQIACGYAHTLALTDEGLLYAW 257
Query: 509 GSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISS-GSYHV-AVLTSGGSVYTWGKNANG 566
G+ +GQLG K ++ ++ +++E V I++ S H A T G VY WG+ G
Sbjct: 258 GANTYGQLGTGN-KSNQLSPLQIMMEKERVVEIAACHSAHTSAAKTQSGQVYMWGQ-CRG 315
Query: 567 Q 567
Q
Sbjct: 316 Q 316
Score = 277 (102.6 bits), Expect = 9.3e-21, P = 9.3e-21
Identities = 80/268 (29%), Positives = 127/268 (47%)
Query: 251 LLPKLLESAVMLDVQNISLGA-KHAALVTKEGEVFCWGEGKDGRLGH-KVNMDVSCPKLV 308
++PK LE+ + ++S G+ H L T++GEV+ WG +LG+ N V+ ++
Sbjct: 63 IVPKKLEALCGKKISSLSYGSGPHVLLCTEDGEVYAWGHNGYSQLGNGATNQGVTPVQVC 122
Query: 309 ECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
L V V+CG + AL+ G++Y WG+NN G VG + + PR++ + L
Sbjct: 123 TNLLLKKVIEVACGSHHSMALSFDGDLYAWGYNNCGQ--VGSGSTANQPTPRRVSNCLQD 180
Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
V +ACG+ + V +G+++ +G G LG GN N P V +L G+ + +AC
Sbjct: 181 KMVVGIACGQTSSMAVVNNGEVYGWGYNGNGQLGLGNNGNQLTPCRVAALHGVCILQIAC 240
Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ 488
G HT A+ D G L+ WG G+LG + +L P + +
Sbjct: 241 GYAHTLALTD-----------EGLLYAWGANTYGQLGTGNKSNQLSPLQIMMEKERVVEI 289
Query: 489 ASCGRMLT-VGLTGLGKVYTMGSAVHGQ 515
A+C T T G+VY G GQ
Sbjct: 290 AACHSAHTSAAKTQSGQVYMWGQC-RGQ 316
Score = 250 (93.1 bits), Expect = 8.9e-18, P = 8.9e-18
Identities = 82/295 (27%), Positives = 137/295 (46%)
Query: 330 TKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEW-HTAIVSTSG 388
T + E++ +G N ++ +G S+S +P+KL + L G ++S ++ G H + + G
Sbjct: 38 THNDEVFVFGLNC--SNCLGTGDSQSTIVPKKL-EALCGKKISSLSYGSGPHVLLCTEDG 94
Query: 389 QLFTYGDGTFGVLGHGNLQNVSQPKEV-ESLRGLKVKSVACGPWHTAAIVDIMVDRCKSN 447
+++ +G + LG+G P +V +L KV VACG H+ A+
Sbjct: 95 EVYAWGHNGYSQLGNGATNQGVTPVQVCTNLLLKKVIEVACGSHHSMAL----------- 143
Query: 448 AIGGKLFTWGDADKGRLGHVDGERKLLPTCVTR-LVDFDFVQASCGRMLTVGLTGLGKVY 506
+ G L+ WG + G++G + P V+ L D V +CG+ ++ + G+VY
Sbjct: 144 SFDGDLYAWGYNNCGQVGSGSTANQPTPRRVSNCLQDKMVVGIACGQTSSMAVVNNGEVY 203
Query: 507 TMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANG 566
G +GQLG ++ L + I+ G H LT G +Y WG N G
Sbjct: 204 GWGYNGNGQLGLGNNGNQLTPCRVAALHGVCILQIACGYAHTLALTDEGLLYAWGANTYG 263
Query: 567 QLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCR 621
QLG G+ + +P + ++R VE C S+ T+A K+ S G QCR
Sbjct: 264 QLGTGNKSNQLSPLQIMMEKERVVEIAACHSAHTSAA---KTQS-GQVYMWGQCR 314
Score = 246 (91.7 bits), Expect = 2.4e-17, P = 2.4e-17
Identities = 59/217 (27%), Positives = 107/217 (49%)
Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
+V WG +G +G+ +Q T V LL+ + ++ G+ H+ ++
Sbjct: 95 EVYAWGHNGYS-QLG---NGATNQGVTPVQVCTNLLLKKVI-----EVACGSHHSMALSF 145
Query: 280 EGEVFCWGEGKDGRLGHKVNMDVSCPKLVE-CLSGINVQSVSCGEFQTCALTKSGEIYTW 338
+G+++ WG G++G + P+ V CL V ++CG+ + A+ +GE+Y W
Sbjct: 146 DGDLYAWGYNNCGQVGSGSTANQPTPRRVSNCLQDKMVVGIACGQTSSMAVVNNGEVYGW 205
Query: 339 GHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTF 398
G+N +G +G + + P ++ L GV + ++ACG HT ++ G L+ +G T+
Sbjct: 206 GYNGNGQ--LGLGNNGNQLTPCRVA-ALHGVCILQIACGYAHTLALTDEGLLYAWGANTY 262
Query: 399 GVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAA 435
G LG GN N P ++ + V+ AC HT+A
Sbjct: 263 GQLGTGNKSNQLSPLQIMMEKERVVEIAACHSAHTSA 299
Score = 224 (83.9 bits), Expect = 6.3e-15, P = 6.3e-15
Identities = 65/225 (28%), Positives = 111/225 (49%)
Query: 382 AIVST-SGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIM 440
AI +T + ++F +G LG G+ Q+ PK++E+L G K+ S++ G +
Sbjct: 34 AIYTTHNDEVFVFGLNCSNCLGTGDSQSTIVPKKLEALCGKKISSLSYGSGPHVLL---- 89
Query: 441 VDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCV-TRLVDFDFVQASCGRMLTVGL 499
C + G+++ WG +LG+ + + P V T L+ ++ +CG ++ L
Sbjct: 90 ---CTED---GEVYAWGHNGYSQLGNGATNQGVTPVQVCTNLLLKKVIEVACGSHHSMAL 143
Query: 500 TGLGKVYTMGSAVHGQLGNPK-AKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVY 558
+ G +Y G GQ+G+ A + V L+++ V GI+ G + + G VY
Sbjct: 144 SFDGDLYAWGYNNCGQVGSGSTANQPTPRRVSNCLQDKMVVGIACGQTSSMAVVNNGEVY 203
Query: 559 TWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
WG N NGQLGLG++ + TP V AL + + CG + T A+
Sbjct: 204 GWGYNGNGQLGLGNNGNQLTPCRVAALHGVCILQIACGYAHTLAL 248
Score = 170 (64.9 bits), Expect = 4.9e-09, P = 4.9e-09
Identities = 54/188 (28%), Positives = 86/188 (45%)
Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
D+ WG G +G GS + T + L+ +++ I+ G + V
Sbjct: 148 DLYAWGYNNCG-QVGS---GSTANQPTP--RRVSNCLQDKMVV---GIACGQTSSMAVVN 198
Query: 280 EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
GEV+ WG +G+LG N + P V L G+ + ++CG T ALT G +Y WG
Sbjct: 199 NGEVYGWGYNGNGQLGLGNNGNQLTPCRVAALHGVCILQIACGYAHTLALTDEGLLYAWG 258
Query: 340 HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVA-CGEWHTAIVST-SGQLFTYGD-- 395
N +G +G + P ++ ++ RV ++A C HT+ T SGQ++ +G
Sbjct: 259 ANTYGQ--LGTGNKSNQLSPLQIM--MEKERVVEIAACHSAHTSAAKTQSGQVYMWGQCR 314
Query: 396 GTFGVLGH 403
G VL H
Sbjct: 315 GQSVVLPH 322
>UNIPROTKB|Q9N1T2 [details] [associations]
symbol:RPGR "X-linked retinitis pigmentosa GTPase
regulator" species:9615 "Canis lupus familiaris" [GO:0036126 "sperm
flagellum" evidence=ISS] [GO:0036064 "cilium basal body"
evidence=ISS] [GO:0042073 "intraflagellar transport" evidence=ISS]
[GO:0042384 "cilium assembly" evidence=ISS] [GO:0005813
"centrosome" evidence=ISS] [GO:0007601 "visual perception"
evidence=ISS] [GO:0005794 "Golgi apparatus" evidence=ISS]
[GO:0035085 "cilium axoneme" evidence=IEA] [GO:0050896 "response to
stimulus" evidence=IEA] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005794 GO:GO:0005813 GO:GO:0007601 GO:GO:0050896
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085
GO:GO:0042384 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0042073 eggNOG:COG5184 GO:GO:0036064
GO:GO:0036126 EMBL:AF148798 EMBL:AF148799 EMBL:AF148800
EMBL:AF148801 RefSeq:NP_001003126.1 UniGene:Cfa.3592
ProteinModelPortal:Q9N1T2 STRING:Q9N1T2 GeneID:403726
KEGG:cfa:403726 CTD:6103 HOGENOM:HOG000231314 HOVERGEN:HBG026899
InParanoid:Q9N1T2 NextBio:20817229 Uniprot:Q9N1T2
Length = 1003
Score = 322 (118.4 bits), Expect = 3.0e-24, Sum P(2) = 3.0e-24
Identities = 98/339 (28%), Positives = 163/339 (48%)
Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQT 326
+S G +H A+VT +++ +G G+LG VS P V+ L V+ +CG T
Sbjct: 40 LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHT 99
Query: 327 CALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVST 386
T+ G++Y G NN G +G+ RS + F + ++ +++ G +A ++
Sbjct: 100 LVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQR--KIKQLSAGSNTSAALTE 157
Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
G+LF +GD + G +G N+ NV P++V G + ++CG +H+A +
Sbjct: 158 DGELFMWGDNSEGQIGLENVTNVCVPQQVTV--GKPISWISCGYYHSAFVTT-------- 207
Query: 447 NAIGGKLFTWGDADKGRLGHVDG--ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
G+L+T+G+ + G+LG + +P V + VQ +CG TV LT
Sbjct: 208 ---EGQLYTFGEPECGKLGLPNQLLVNHRMPQPVPGIPG-KVVQVACGGGHTVVLTEKA- 262
Query: 505 VYTMGSAVHGQLG-NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKN 563
VYT G GQLG + S+ +K++ + I+ G H A++T G +YT+G
Sbjct: 263 VYTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQKISFIACGENHTALITDMGLMYTFGDG 322
Query: 564 ANGQLGLG--DSQERETPTFVEALRDRQVESVVCGSSIT 600
+G+LGLG +S + PT V+ V CG T
Sbjct: 323 RHGKLGLGLENSTNQFIPTLCSNFLRFIVQLVSCGGCHT 361
Score = 285 (105.4 bits), Expect = 3.0e-20, Sum P(2) = 3.0e-20
Identities = 77/269 (28%), Positives = 135/269 (50%)
Query: 230 GGDI---GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCW 286
GG + GG +G + T+ + + ++ +S G+ +A +T++GE+F W
Sbjct: 105 GGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAALTEDGELFMW 164
Query: 287 GEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGAD 346
G+ +G++G + +V P+ V G + +SCG + + +T G++YT+G G
Sbjct: 165 GDNSEGQIGLENVTNVCVPQQVTV--GKPISWISCGYYHSAFVTTEGQLYTFGEPECGKL 222
Query: 347 LVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGN- 405
+ + +H +P+ + + G +V +VACG HT +V T ++T+G G FG LG G
Sbjct: 223 GLPNQLLVNHRMPQPV-PGIPG-KVVQVACGGGHT-VVLTEKAVYTFGLGQFGQLGLGTF 279
Query: 406 LQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG 465
L S PK +E ++ K+ +ACG HTA I D+ G ++T+GD G+LG
Sbjct: 280 LFETSVPKAIEHIKDQKISFIACGENHTALITDM-----------GLMYTFGDGRHGKLG 328
Query: 466 H--VDGERKLLPTCVTRLVDFDFVQASCG 492
+ + +PT + + F SCG
Sbjct: 329 LGLENSTNQFIPTLCSNFLRFIVQLVSCG 357
Score = 268 (99.4 bits), Expect = 2.1e-18, Sum P(2) = 2.1e-18
Identities = 92/329 (27%), Positives = 153/329 (46%)
Query: 231 GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
G +G +VS+ T V AL P+ ++ A + G H + T+ G+V+ G
Sbjct: 65 GQLGLGSKSTVSK-PTCVKALKPEKVKFA--------ACGRNHTLVSTEGGKVYAAGGNN 115
Query: 291 DGRLGHKVNMDVSCPKLVECL-SGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVG 349
+G+LG + S L+ S ++ +S G + ALT+ GE++ WG N+ G +G
Sbjct: 116 EGQLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAALTEDGELFMWGDNSEGQ--IG 173
Query: 350 ERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGN--LQ 407
+ +P+++ T+ G +S ++CG +H+A V+T GQL+T+G+ G LG N L
Sbjct: 174 LENVTNVCVPQQV--TV-GKPISWISCGYYHSAFVTTEGQLYTFGEPECGKLGLPNQLLV 230
Query: 408 NVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG-H 466
N P+ V + G KV VACG HT + + V +T+G G+LG
Sbjct: 231 NHRMPQPVPGIPG-KVVQVACGGGHTVVLTEKAV------------YTFGLGQFGQLGLG 277
Query: 467 VDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN--PKAKDR 524
+P + + D +CG T +T +G +YT G HG+LG + ++
Sbjct: 278 TFLFETSVPKAIEHIKDQKISFIACGENHTALITDMGLMYTFGDGRHGKLGLGLENSTNQ 337
Query: 525 SITVVEGKLKEEFVKGISSGSYHVAVLTS 553
I + V+ +S G H V +
Sbjct: 338 FIPTLCSNFLRFIVQLVSCGGCHTLVFAT 366
Score = 257 (95.5 bits), Expect = 3.2e-17, Sum P(2) = 3.2e-17
Identities = 83/290 (28%), Positives = 137/290 (47%)
Query: 319 VSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGE 378
+SCG+ T +T + ++Y +G NN G +G + + S P + L +V ACG
Sbjct: 40 LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSK--PTCV-KALKPEKVKFAACGR 96
Query: 379 WHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGL-KVKSVACGPWHTAAIV 437
HT + + G+++ G G LG G+ + S + K+K ++ G +AA+
Sbjct: 97 NHTLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAALT 156
Query: 438 DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTV 497
+ G+LF WGD +G++G + +P VT ++ SCG +
Sbjct: 157 E-----------DGELFMWGDNSEGQIGLENVTNVCVPQQVTVGKPISWI--SCGYYHSA 203
Query: 498 GLTGLGKVYTMGSAVHGQLGNPK---AKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSG 554
+T G++YT G G+LG P R V G + + V+ ++ G H VLT
Sbjct: 204 FVTTEGQLYTFGEPECGKLGLPNQLLVNHRMPQPVPG-IPGKVVQ-VACGGGHTVVLTEK 261
Query: 555 GSVYTWGKNANGQLGLGDSQ-ERETPTFVEALRDRQVESVVCGSSITAAI 603
+VYT+G GQLGLG E P +E ++D+++ + CG + TA I
Sbjct: 262 -AVYTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQKISFIACGENHTALI 310
Score = 178 (67.7 bits), Expect = 8.9e-09, Sum P(2) = 8.9e-09
Identities = 50/129 (38%), Positives = 67/129 (51%)
Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLG-NPKAKDRSITVVEGKLKEEFVKGISSGSYHV 548
SCG T +TG K+Y GS GQLG K+ T V+ LK E VK + G H
Sbjct: 41 SCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKA-LKPEKVKFAACGRNHT 99
Query: 549 AVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRD-RQVESVVCGSSITAAICLHK 607
V T GG VY G N GQLGLGD++ER T + R+++ + GS+ +AA+
Sbjct: 100 LVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAALTEDG 159
Query: 608 SISV-GDQS 615
+ + GD S
Sbjct: 160 ELFMWGDNS 168
Score = 45 (20.9 bits), Expect = 3.0e-24, Sum P(2) = 3.0e-24
Identities = 14/50 (28%), Positives = 26/50 (52%)
Query: 795 ASTVEKDLSESNKMLN-EEVQRLRDQARNLEKQCQIGNQKVQECQQKIEE 843
++T + L E+ +LN + L ++L K I QK QE +K+++
Sbjct: 488 SATDSESLGETTDVLNMTHMMSLNSNDKSL-KLSPIDKQKKQETIEKLKQ 536
>UNIPROTKB|E1BKF7 [details] [associations]
symbol:RCBTB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104208 CTD:55213 KO:K11494
OMA:NCSNCLG EMBL:DAAA02032915 EMBL:DAAA02032914 IPI:IPI00826911
RefSeq:NP_001178141.1 UniGene:Bt.22187 Ensembl:ENSBTAT00000035796
GeneID:785222 KEGG:bta:785222 NextBio:20927167 Uniprot:E1BKF7
Length = 531
Score = 308 (113.5 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 92/301 (30%), Positives = 140/301 (46%)
Query: 271 AKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCAL- 329
A A VT EVF +G LG N PK +E L G ++S+S G L
Sbjct: 31 ANEALYVTDSDEVFVFGLNYSSCLGTGDNHSTLVPKKLEALCGKKIKSLSYGSGPHVLLS 90
Query: 330 TKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQ 389
T+ G +Y WGHN G +G + P ++ L +V +VACG H+ ++ G+
Sbjct: 91 TEDGVVYAWGHN--GYSQLGNGTTNQGLAPIQVCTNLLIKQVVEVACGSHHSMALAADGE 148
Query: 390 LFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLK-VKSVACGPWHTAAIVDIMVDRCKSNA 448
+F +G G +G G+ N P++V + +K V +ACG + A++D
Sbjct: 149 VFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLD---------- 198
Query: 449 IGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTM 508
G+++ WG G+LG + +L P V L Q CG T+ LT G +Y
Sbjct: 199 -NGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAW 257
Query: 509 GSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISS-GSYHV-AVLTSGGSVYTWGKNANG 566
G+ +GQLG K+ ++ +++E V I++ S H A T GG VY WG+ G
Sbjct: 258 GANTYGQLGTGN-KNNLLSPAHIMVEKERVIEIAACHSAHTSAAKTQGGHVYMWGQ-CRG 315
Query: 567 Q 567
Q
Sbjct: 316 Q 316
Score = 263 (97.6 bits), Expect = 3.3e-19, P = 3.3e-19
Identities = 83/271 (30%), Positives = 126/271 (46%)
Query: 251 LLPKLLESAVMLDVQNISLGA-KHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVE 309
L+PK LE+ ++++S G+ H L T++G V+ WG +LG+ P V
Sbjct: 63 LVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGLAPIQV- 121
Query: 310 CLSGI--NVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLD 367
C + + V V+CG + AL GE++ WG+NN G VG + + PRK+ + L
Sbjct: 122 CTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQ--VGSGSTANQPTPRKVTNCLH 179
Query: 368 GVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVA 427
RV +ACG+ + V +G+++ +G G LG GN N P V +L + V +
Sbjct: 180 IKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIV 239
Query: 428 CGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFV 487
CG HT A+ D G L+ WG G+LG + L P + +V+ + V
Sbjct: 240 CGYAHTLALTD-----------EGLLYAWGANTYGQLGTGNKNNLLSPAHI--MVEKERV 286
Query: 488 Q--ASCGRMLT-VGLTGLGKVYTMGSAVHGQ 515
A+C T T G VY G GQ
Sbjct: 287 IEIAACHSAHTSAAKTQGGHVYMWGQC-RGQ 316
Score = 248 (92.4 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 76/277 (27%), Positives = 127/277 (45%)
Query: 329 LTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS- 387
+T S E++ +G N + +G + S +P+KL + L G ++ ++ G ++ST
Sbjct: 37 VTDSDEVFVFGLNY--SSCLGTGDNHSTLVPKKL-EALCGKKIKSLSYGSGPHVLLSTED 93
Query: 388 GQLFTYGDGTFGVLGHGNLQNVSQPKEV-ESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
G ++ +G + LG+G P +V +L +V VACG H+ A+
Sbjct: 94 GVVYAWGHNGYSQLGNGTTNQGLAPIQVCTNLLIKQVVEVACGSHHSMAL---------- 143
Query: 447 NAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFD-FVQASCGRMLTVGLTGLGKV 505
A G++F WG + G++G + P VT + V +CG+ ++ + G+V
Sbjct: 144 -AADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEV 202
Query: 506 YTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
Y G +GQLG ++ V L V I G H LT G +Y WG N
Sbjct: 203 YGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTY 262
Query: 566 GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
GQLG G+ +P + ++R +E C S+ T+A
Sbjct: 263 GQLGTGNKNNLLSPAHIMVEKERVIEIAACHSAHTSA 299
Score = 225 (84.3 bits), Expect = 4.9e-15, P = 4.9e-15
Identities = 68/222 (30%), Positives = 107/222 (48%)
Query: 384 VSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
V+ S ++F +G LG G+ + PK++E+L G K+KS++ G + V + +
Sbjct: 37 VTDSDEVFVFGLNYSSCLGTGDNHSTLVPKKLEALCGKKIKSLSYG---SGPHVLLSTE- 92
Query: 444 CKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCV-TRLVDFDFVQASCGRMLTVGLTGL 502
G ++ WG +LG+ + L P V T L+ V+ +CG ++ L
Sbjct: 93 ------DGVVYAWGHNGYSQLGNGTTNQGLAPIQVCTNLLIKQVVEVACGSHHSMALAAD 146
Query: 503 GKVYTMGSAVHGQLGNPK-AKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWG 561
G+V+ G GQ+G+ A + V L + V GI+ G + G VY WG
Sbjct: 147 GEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWG 206
Query: 562 KNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
N NGQLGLG++ + TP V AL V +VCG + T A+
Sbjct: 207 YNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLAL 248
Score = 151 (58.2 bits), Expect = 5.6e-07, P = 5.6e-07
Identities = 55/201 (27%), Positives = 87/201 (43%)
Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLD-VQNISLGAKHAALVT 278
+V WG G +G GS + T P+ + + + + V I+ G + V
Sbjct: 148 EVFAWGYNNCG-QVGS---GSTANQPT------PRKVTNCLHIKRVVGIACGQTSSMAVL 197
Query: 279 KEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTW 338
GEV+ WG +G+LG N + P V L + V + CG T ALT G +Y W
Sbjct: 198 DNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAW 257
Query: 339 GHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVA-CGEWHTAIVSTSG-QLFTYGD- 395
G N +G +G + P + ++ RV ++A C HT+ T G ++ +G
Sbjct: 258 GANTYGQ--LGTGNKNNLLSPAHIM--VEKERVIEIAACHSAHTSAAKTQGGHVYMWGQC 313
Query: 396 -GTFGVLGHGNLQNVSQPKEV 415
G L H L ++S +V
Sbjct: 314 RGQSVTLPH--LTHLSSTDDV 332
>UNIPROTKB|Q92834 [details] [associations]
symbol:RPGR "X-linked retinitis pigmentosa GTPase
regulator" species:9606 "Homo sapiens" [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0050896 "response to stimulus" evidence=IEA] [GO:0035085
"cilium axoneme" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007601 "visual perception" evidence=IMP] [GO:0001750
"photoreceptor outer segment" evidence=IDA] [GO:0005813
"centrosome" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0042073 "intraflagellar transport" evidence=ISS]
[GO:0036064 "cilium basal body" evidence=ISS] [GO:0036126 "sperm
flagellum" evidence=ISS] [GO:0006886 "intracellular protein
transport" evidence=TAS] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005794 GO:GO:0005813 GO:GO:0006886 GO:GO:0007601
Orphanet:1872 Orphanet:791 GO:GO:0050896 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085 GO:GO:0042384
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:CH471141 GO:GO:0042073 GO:GO:0001750 eggNOG:COG5184
Orphanet:244 GO:GO:0036064 Orphanet:49382 GO:GO:0036126
EMBL:AL606748 CTD:6103 HOVERGEN:HBG026899 EMBL:U57629 EMBL:X97668
EMBL:AJ238395 EMBL:AJ318463 EMBL:BC031624 EMBL:AF286471
EMBL:BK005711 IPI:IPI00023757 IPI:IPI00215806 IPI:IPI00215807
IPI:IPI00215808 IPI:IPI00382445 IPI:IPI00397031 RefSeq:NP_000319.1
RefSeq:NP_001030025.1 UniGene:Hs.61438 ProteinModelPortal:Q92834
SMR:Q92834 STRING:Q92834 PhosphoSite:Q92834 DMDM:23503098
PaxDb:Q92834 PRIDE:Q92834 DNASU:6103 Ensembl:ENST00000309513
Ensembl:ENST00000318842 Ensembl:ENST00000338898
Ensembl:ENST00000339363 Ensembl:ENST00000342811
Ensembl:ENST00000378505 Ensembl:ENST00000474584
Ensembl:ENST00000482855 GeneID:6103 KEGG:hsa:6103 UCSC:uc004deb.3
GeneCards:GC0XM038128 HGNC:HGNC:10295 HPA:HPA001593 MIM:300029
MIM:300455 MIM:300834 MIM:304020 MIM:312610 neXtProt:NX_Q92834
Orphanet:247522 PharmGKB:PA34656 OMA:NNVLPHY PhylomeDB:Q92834
ChiTaRS:RPGR GenomeRNAi:6103 NextBio:23741 ArrayExpress:Q92834
Bgee:Q92834 CleanEx:HS_RPGR Genevestigator:Q92834
GermOnline:ENSG00000156313 Uniprot:Q92834
Length = 1020
Score = 325 (119.5 bits), Expect = 3.9e-24, Sum P(2) = 3.9e-24
Identities = 96/337 (28%), Positives = 164/337 (48%)
Query: 266 NISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQ 325
++S G +H+A+VT +++ +G G+LG +S P V+ L V+ +CG
Sbjct: 39 HLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNH 98
Query: 326 TCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVS 385
T T+ G +Y G NN G +G+ R+ + F + ++ +++ G +A ++
Sbjct: 99 TLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEH--KIKQLSAGSNTSAALT 156
Query: 386 TSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCK 445
G+LF +GD + G +G N+ NV P++V G V ++CG +H+A + D
Sbjct: 157 EDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTI--GKPVSWISCGYYHSAFVT---TD--- 208
Query: 446 SNAIGGKLFTWGDADKGRLG---HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGL 502
G+L+ +G+ + G+LG + G + P V+ + + +Q +CG TV LT
Sbjct: 209 -----GELYVFGEPENGKLGLPNQLLGNHRT-PQLVSEIPE-KVIQVACGGEHTVVLTE- 260
Query: 503 GKVYTMGSAVHGQLG-NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWG 561
VYT G GQLG + S V ++++ + IS G H A++T G +YT+G
Sbjct: 261 NAVYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALITDIGLMYTFG 320
Query: 562 KNANGQLGLG--DSQERETPTFVEALRDRQVESVVCG 596
+G+LGLG + PT V+ V CG
Sbjct: 321 DGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACG 357
Score = 278 (102.9 bits), Expect = 4.8e-19, Sum P(2) = 4.8e-19
Identities = 70/232 (30%), Positives = 122/232 (52%)
Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
++ +S G+ +A +T++G +F WG+ +G++G K +V P+ V G V +SCG
Sbjct: 142 IKQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTI--GKPVSWISCGY 199
Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
+ + +T GE+Y +G +G + + +H P+ + + + +V +VACG HT +
Sbjct: 200 YHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPE--KVIQVACGGEHT-V 256
Query: 384 VSTSGQLFTYGDGTFGVLGHGN-LQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
V T ++T+G G FG LG G L S+PK +E++R + ++CG HTA I DI
Sbjct: 257 VLTENAVYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALITDI--- 313
Query: 443 RCKSNAIGGKLFTWGDADKGRLG-HVDG-ERKLLPTCVTRLVDFDFVQASCG 492
G ++T+GD G+LG ++ +PT + + F +CG
Sbjct: 314 --------GLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACG 357
Score = 258 (95.9 bits), Expect = 6.8e-17, Sum P(2) = 6.8e-17
Identities = 80/290 (27%), Positives = 138/290 (47%)
Query: 319 VSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGE 378
+SCG+ + +T + ++Y +G NN G +G + + S P + L +V ACG
Sbjct: 40 LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISK--PTCV-KALKPEKVKLAACGR 96
Query: 379 WHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGL-KVKSVACGPWHTAAIV 437
HT + + G ++ G G LG G+ + + + K+K ++ G +AA+
Sbjct: 97 NHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALT 156
Query: 438 DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTV 497
+ G+LF WGD +G++G + +P VT ++ SCG +
Sbjct: 157 E-----------DGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWI--SCGYYHSA 203
Query: 498 GLTGLGKVYTMGSAVHGQLGNPK---AKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSG 554
+T G++Y G +G+LG P R+ +V ++ E+ ++ ++ G H VLT
Sbjct: 204 FVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVS-EIPEKVIQ-VACGGEHTVVLTEN 261
Query: 555 GSVYTWGKNANGQLGLGDSQ-ERETPTFVEALRDRQVESVVCGSSITAAI 603
+VYT+G GQLGLG E P +E +RD+ + + CG + TA I
Sbjct: 262 -AVYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALI 310
Score = 204 (76.9 bits), Expect = 4.1e-11, Sum P(2) = 4.1e-11
Identities = 57/170 (33%), Positives = 92/170 (54%)
Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLG--HKVNMDVSCPKLVECLSGINVQSVSCGEF 324
IS G H+A VT +GE++ +GE ++G+LG +++ + P+LV + +Q V+CG
Sbjct: 195 ISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKVIQ-VACGGE 253
Query: 325 QTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIV 384
T LT++ +YT+G G +G + P K+ + + +S ++CGE HTA++
Sbjct: 254 HTVVLTENA-VYTFGLGQFGQLGLGTFLFETSE-P-KVIENIRDQTISYISCGENHTALI 310
Query: 385 STSGQLFTYGDGTFGVLGHG--NLQNVSQPKEVESLRGLKVKSVACGPWH 432
+ G ++T+GDG G LG G N N P + VK VACG H
Sbjct: 311 TDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCH 360
Score = 173 (66.0 bits), Expect = 8.1e-08, Sum P(2) = 8.1e-08
Identities = 46/119 (38%), Positives = 64/119 (53%)
Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAVHGQLG-NPKAKDRSITVVEGKLKEEFVKGISSGS 545
V SCG + +TG K+Y GS GQLG K+ T V+ LK E VK + G
Sbjct: 38 VHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKA-LKPEKVKLAACGR 96
Query: 546 YHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALR-DRQVESVVCGSSITAAI 603
H V T GG+VY G N GQLGLGD++ER T + + +++ + GS+ +AA+
Sbjct: 97 NHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAAL 155
Score = 41 (19.5 bits), Expect = 3.9e-24, Sum P(2) = 3.9e-24
Identities = 14/50 (28%), Positives = 24/50 (48%)
Query: 673 QKITHSGRLLKQENQSPRN-LLNLQGSLSEEVKEEKGALTPSRGQSFTSK 721
+K R + + N++P+ +L+ S S E+ E TPS+ T K
Sbjct: 904 EKANLEERAICEYNENPKGYMLDDADSSSLEILENSET-TPSKDMKKTKK 952
>UNIPROTKB|Q8NDN9 [details] [associations]
symbol:RCBTB1 "RCC1 and BTB domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR000210 InterPro:IPR013069
Pfam:PF00651 PROSITE:PS50097 SMART:SM00225 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GO:GO:0006351 GO:GO:0016568 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 GO:GO:0007049 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 EMBL:AL139321 EMBL:AF334406
EMBL:AJ319660 EMBL:AK096654 EMBL:AL833821 EMBL:BC038104
IPI:IPI00329626 IPI:IPI00973193 RefSeq:NP_060661.3
UniGene:Hs.508021 ProteinModelPortal:Q8NDN9 SMR:Q8NDN9
IntAct:Q8NDN9 MINT:MINT-4718485 STRING:Q8NDN9 PhosphoSite:Q8NDN9
DMDM:74751227 PRIDE:Q8NDN9 DNASU:55213 Ensembl:ENST00000258646
Ensembl:ENST00000378302 Ensembl:ENST00000546015 GeneID:55213
KEGG:hsa:55213 UCSC:uc001vde.1 CTD:55213 GeneCards:GC13M050106
HGNC:HGNC:18243 HPA:HPA045925 MIM:607867 neXtProt:NX_Q8NDN9
PharmGKB:PA134955699 HOGENOM:HOG000065752 HOVERGEN:HBG053261
InParanoid:Q8NDN9 KO:K11494 OMA:NCSNCLG OrthoDB:EOG4MSCXX
PhylomeDB:Q8NDN9 GenomeRNAi:55213 NextBio:59164 ArrayExpress:Q8NDN9
Bgee:Q8NDN9 CleanEx:HS_RCBTB1 Genevestigator:Q8NDN9
GermOnline:ENSG00000136144 Uniprot:Q8NDN9
Length = 531
Score = 307 (113.1 bits), Expect = 4.2e-24, P = 4.2e-24
Identities = 92/301 (30%), Positives = 140/301 (46%)
Query: 271 AKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCAL- 329
A A VT EVF +G LG N PK +E L G ++S+S G L
Sbjct: 31 ASEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEGLCGKKIKSLSYGSGPHVLLS 90
Query: 330 TKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQ 389
T+ G +Y WGHN G +G + P ++ L +V +VACG H+ ++ G+
Sbjct: 91 TEDGVVYAWGHN--GYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGE 148
Query: 390 LFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLK-VKSVACGPWHTAAIVDIMVDRCKSNA 448
+F +G G +G G+ N P++V + +K V +ACG + A++D
Sbjct: 149 VFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLD---------- 198
Query: 449 IGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTM 508
G+++ WG G+LG + +L P V L Q CG T+ LT G +Y
Sbjct: 199 -NGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAW 257
Query: 509 GSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISS-GSYHV-AVLTSGGSVYTWGKNANG 566
G+ +GQLG K+ ++ +++E V I++ S H A T GG VY WG+ G
Sbjct: 258 GANTYGQLGTGN-KNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ-CRG 315
Query: 567 Q 567
Q
Sbjct: 316 Q 316
Score = 265 (98.3 bits), Expect = 2.0e-19, P = 2.0e-19
Identities = 82/270 (30%), Positives = 126/270 (46%)
Query: 251 LLPKLLESAVMLDVQNISLGA-KHAALVTKEGEVFCWGEGKDGRLGH-KVNMDVSCPKLV 308
L+PK LE ++++S G+ H L T++G V+ WG +LG+ N ++ ++
Sbjct: 63 LVPKKLEGLCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVC 122
Query: 309 ECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
L V V+CG + AL GE++ WG+NN G VG + + PRK+ + L
Sbjct: 123 TNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQ--VGSGSTANQPTPRKVTNCLHI 180
Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
RV +ACG+ + V +G+++ +G G LG GN N P V +L + V + C
Sbjct: 181 KRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVC 240
Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ 488
G HT A+ D G L+ WG G+LG + L P + +V+ + V
Sbjct: 241 GYAHTLALTD-----------EGLLYAWGANTYGQLGTGNKNNLLSPAHI--MVEKERVV 287
Query: 489 --ASCGRMLT-VGLTGLGKVYTMGSAVHGQ 515
A+C T T G VY G GQ
Sbjct: 288 EIAACHSAHTSAAKTQGGHVYMWGQC-RGQ 316
Score = 247 (92.0 bits), Expect = 1.9e-17, P = 1.9e-17
Identities = 76/277 (27%), Positives = 129/277 (46%)
Query: 329 LTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS- 387
+T + E++ +G N ++ +G ++S +P+KL + L G ++ ++ G ++ST
Sbjct: 37 VTDNDEVFVFGLNY--SNCLGTGDNQSTLVPKKL-EGLCGKKIKSLSYGSGPHVLLSTED 93
Query: 388 GQLFTYGDGTFGVLGHGNLQNVSQPKEV-ESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
G ++ +G + LG+G P +V +L +V VACG H+ A+
Sbjct: 94 GVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMAL---------- 143
Query: 447 NAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFD-FVQASCGRMLTVGLTGLGKV 505
A G++F WG + G++G + P VT + V +CG+ ++ + G+V
Sbjct: 144 -AADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEV 202
Query: 506 YTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
Y G +GQLG ++ V L V I G H LT G +Y WG N
Sbjct: 203 YGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTY 262
Query: 566 GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
GQLG G+ +P + ++R VE C S+ T+A
Sbjct: 263 GQLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSA 299
Score = 225 (84.3 bits), Expect = 4.9e-15, P = 4.9e-15
Identities = 67/222 (30%), Positives = 107/222 (48%)
Query: 384 VSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
V+ + ++F +G LG G+ Q+ PK++E L G K+KS++ G + V + +
Sbjct: 37 VTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEGLCGKKIKSLSYG---SGPHVLLSTE- 92
Query: 444 CKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCV-TRLVDFDFVQASCGRMLTVGLTGL 502
G ++ WG +LG+ + + P V T L+ V+ +CG ++ L
Sbjct: 93 ------DGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAAD 146
Query: 503 GKVYTMGSAVHGQLGNPK-AKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWG 561
G+V+ G GQ+G+ A + V L + V GI+ G + G VY WG
Sbjct: 147 GEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWG 206
Query: 562 KNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
N NGQLGLG++ + TP V AL V +VCG + T A+
Sbjct: 207 YNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLAL 248
Score = 152 (58.6 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 52/188 (27%), Positives = 79/188 (42%)
Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLD-VQNISLGAKHAALVT 278
+V WG G +G GS + T P+ + + + + V I+ G + V
Sbjct: 148 EVFAWGYNNCG-QVGS---GSTANQPT------PRKVTNCLHIKRVVGIACGQTSSMAVL 197
Query: 279 KEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTW 338
GEV+ WG +G+LG N + P V L + V + CG T ALT G +Y W
Sbjct: 198 DNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAW 257
Query: 339 GHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSG-QLFTYGD-- 395
G N +G +G + P + + V V AC HT+ T G ++ +G
Sbjct: 258 GANTYGQ--LGTGNKNNLLSPAHIMVEKERV-VEIAACHSAHTSAAKTQGGHVYMWGQCR 314
Query: 396 GTFGVLGH 403
G +L H
Sbjct: 315 GQSVILPH 322
>UNIPROTKB|I3LCV3 [details] [associations]
symbol:RCBTB1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104208 OMA:NCSNCLG
EMBL:FP325140 Ensembl:ENSSSCT00000023143 Uniprot:I3LCV3
Length = 560
Score = 314 (115.6 bits), Expect = 6.7e-24, Sum P(2) = 6.7e-24
Identities = 93/301 (30%), Positives = 141/301 (46%)
Query: 271 AKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCAL- 329
A A VT EVF +G LG N PK +E L G ++S+S G L
Sbjct: 60 ANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLS 119
Query: 330 TKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQ 389
T+ G +Y WGHN G +G + P ++ L +V +VACG H+ ++ G+
Sbjct: 120 TEDGVVYAWGHN--GYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGE 177
Query: 390 LFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLK-VKSVACGPWHTAAIVDIMVDRCKSNA 448
+F +G G +G G+ N P++V + +K V S+ACG + A++D
Sbjct: 178 VFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLD---------- 227
Query: 449 IGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTM 508
G+++ WG G+LG + +L P V L Q CG T+ LT G +Y
Sbjct: 228 -NGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAW 286
Query: 509 GSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISS-GSYHV-AVLTSGGSVYTWGKNANG 566
G+ +GQLG K+ ++ +++E V I++ S H A T GG VY WG+ G
Sbjct: 287 GANTYGQLGTGN-KNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ-CRG 344
Query: 567 Q 567
Q
Sbjct: 345 Q 345
Score = 267 (99.0 bits), Expect = 1.4e-18, Sum P(2) = 1.4e-18
Identities = 82/270 (30%), Positives = 127/270 (47%)
Query: 251 LLPKLLESAVMLDVQNISLGA-KHAALVTKEGEVFCWGEGKDGRLGH-KVNMDVSCPKLV 308
L+PK LE+ ++++S G+ H L T++G V+ WG +LG+ N ++ ++
Sbjct: 92 LVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVC 151
Query: 309 ECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
L V V+CG + AL GE++ WG+NN G VG + + PRK+ + L
Sbjct: 152 TNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQ--VGSGSTANQPTPRKVTNCLHI 209
Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
RV +ACG+ + V +G+++ +G G LG GN N P V +L + V + C
Sbjct: 210 KRVVSIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVC 269
Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ 488
G HT A+ D G L+ WG G+LG + L P + +V+ + V
Sbjct: 270 GYAHTLALTD-----------EGLLYAWGANTYGQLGTGNKNNLLSPAHI--MVEKERVV 316
Query: 489 --ASCGRMLT-VGLTGLGKVYTMGSAVHGQ 515
A+C T T G VY G GQ
Sbjct: 317 EIAACHSAHTSAAKTQGGHVYMWGQC-RGQ 345
Score = 251 (93.4 bits), Expect = 8.6e-17, Sum P(2) = 8.6e-17
Identities = 86/316 (27%), Positives = 145/316 (45%)
Query: 297 KVNMDVSCPKLVECLSGINVQSV--SCGEFQTCA-----LTKSGEIYTWGHNNHGADLVG 349
+V +DV + LS + S+ +C F T A +T + E++ +G N ++ +G
Sbjct: 28 RVMVDVGKWPIFTLLSPQEIASIRKAC-VFGTSANEALYVTDNDEVFVFGLNY--SNCLG 84
Query: 350 ERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS-GQLFTYGDGTFGVLGHGNLQN 408
++S +P+KL + L G ++ ++ G ++ST G ++ +G + LG+G
Sbjct: 85 TGDNQSTLVPKKL-EALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQ 143
Query: 409 VSQPKEV-ESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHV 467
P +V +L +V VACG H+ A+ A G++F WG + G++G
Sbjct: 144 GIAPIQVCTNLLIKQVVEVACGSHHSMAL-----------AADGEVFAWGYNNCGQVGSG 192
Query: 468 DGERKLLPTCVTRLVDFD-FVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSI 526
+ P VT + V +CG+ ++ + G+VY G +GQLG ++
Sbjct: 193 STANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLT 252
Query: 527 TVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALR 586
V L V I G H LT G +Y WG N GQLG G+ +P + +
Sbjct: 253 PVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVEK 312
Query: 587 DRQVESVVCGSSITAA 602
+R VE C S+ T+A
Sbjct: 313 ERVVEIAACHSAHTSA 328
Score = 250 (93.1 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 61/216 (28%), Positives = 107/216 (49%)
Query: 244 NKTQVDALLP-KLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDV 302
N T + P ++ + ++ V ++ G+ H+ + +GEVF WG G++G +
Sbjct: 138 NGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ 197
Query: 303 SCP-KLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRK 361
P K+ CL V S++CG+ + A+ +GE+Y WG+N +G +G + + P +
Sbjct: 198 PTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGYNGNGQ--LGLGNNGNQLTPVR 255
Query: 362 LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGL 421
+ L V V+++ CG HT ++ G L+ +G T+G LG GN N+ P + +
Sbjct: 256 VA-ALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVEKER 314
Query: 422 KVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
V+ AC HT+A K+ GG ++ WG
Sbjct: 315 VVEIAACHSAHTSA--------AKTQ--GGHVYMWG 340
Score = 219 (82.2 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 66/222 (29%), Positives = 107/222 (48%)
Query: 384 VSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
V+ + ++F +G LG G+ Q+ PK++E+L G K+KS++ G + V + +
Sbjct: 66 VTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYG---SGPHVLLSTE- 121
Query: 444 CKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCV-TRLVDFDFVQASCGRMLTVGLTGL 502
G ++ WG +LG+ + + P V T L+ V+ +CG ++ L
Sbjct: 122 ------DGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAAD 175
Query: 503 GKVYTMGSAVHGQLGNPK-AKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWG 561
G+V+ G GQ+G+ A + V L + V I+ G + G VY WG
Sbjct: 176 GEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGWG 235
Query: 562 KNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
N NGQLGLG++ + TP V AL V +VCG + T A+
Sbjct: 236 YNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLAL 277
Score = 151 (58.2 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 49/177 (27%), Positives = 76/177 (42%)
Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLD-VQNISLGAKHAALVT 278
+V WG G +G GS + T P+ + + + + V +I+ G + V
Sbjct: 177 EVFAWGYNNCG-QVGS---GSTANQPT------PRKVTNCLHIKRVVSIACGQTSSMAVL 226
Query: 279 KEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTW 338
GEV+ WG +G+LG N + P V L + V + CG T ALT G +Y W
Sbjct: 227 DNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAW 286
Query: 339 GHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSG-QLFTYG 394
G N +G +G + P + + V V AC HT+ T G ++ +G
Sbjct: 287 GANTYGQ--LGTGNKNNLLSPAHIMVEKERV-VEIAACHSAHTSAAKTQGGHVYMWG 340
Score = 38 (18.4 bits), Expect = 6.7e-24, Sum P(2) = 6.7e-24
Identities = 8/23 (34%), Positives = 16/23 (69%)
Query: 242 SQNKTQVDALLPKLLESAVMLDV 264
S + ++++L + LE+ VM+DV
Sbjct: 11 SPPQLRINSLRQEFLEARVMVDV 33
>UNIPROTKB|Q86SG6 [details] [associations]
symbol:NEK8 "Serine/threonine-protein kinase Nek8"
species:9606 "Homo sapiens" [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0072372 "primary cilium" evidence=ISS]
InterPro:IPR000719 InterPro:IPR002290 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005524 GO:GO:0005737 GO:GO:0005856
GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0072372
EMBL:CH471159 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 KO:K08857 Orphanet:655 EMBL:AC010761 CTD:284086
HOGENOM:HOG000006908 HOVERGEN:HBG098799 EMBL:AY242354 EMBL:AY267371
EMBL:BC112240 EMBL:BC113705 EMBL:AL833909 IPI:IPI00328397
RefSeq:NP_835464.1 UniGene:Hs.448468 ProteinModelPortal:Q86SG6
SMR:Q86SG6 IntAct:Q86SG6 STRING:Q86SG6 PhosphoSite:Q86SG6
DMDM:34098463 PaxDb:Q86SG6 PRIDE:Q86SG6 DNASU:284086
Ensembl:ENST00000268766 GeneID:284086 KEGG:hsa:284086
UCSC:uc002hcp.3 GeneCards:GC17P027055 HGNC:HGNC:13387 HPA:HPA040661
HPA:HPA040679 MIM:609799 MIM:613824 neXtProt:NX_Q86SG6
PharmGKB:PA38361 InParanoid:Q86SG6 OMA:EREVFAW OrthoDB:EOG4PZJ65
GenomeRNAi:284086 NextBio:94527 ArrayExpress:Q86SG6 Bgee:Q86SG6
CleanEx:HS_NEK8 Genevestigator:Q86SG6 GermOnline:ENSG00000160602
Uniprot:Q86SG6
Length = 692
Score = 308 (113.5 bits), Expect = 7.9e-24, P = 7.9e-24
Identities = 109/384 (28%), Positives = 164/384 (42%)
Query: 239 GSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKV 298
GSV + + + + I G A+ V+ WG G LG +
Sbjct: 270 GSVRMRRAEKSVAPSNTGSRTTSVRCRGIPRGPVRPAIPPPLSSVYAWGGG----LGTPL 325
Query: 299 NMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGAD----LVGE-RRS 353
+ P L V V+ G Q +T+SG + W GA L G +
Sbjct: 326 RL----PML-----NTEVVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGGSLLPGAVEQP 376
Query: 354 RSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPK 413
+ ++ R L + GV + VACG++ TA ++ G + T+G G+ G LGHG+L ++SQP
Sbjct: 377 QPQFISRFL-EGQSGVTIKHVACGDFFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQPT 435
Query: 414 EVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL 473
VE+L G ++ VACG H A+ +R +LF WG D GRLG E
Sbjct: 436 IVEALLGYEMVQVACGASHVLAL---STER--------ELFAWGRGDSGRLGLGTRESHS 484
Query: 474 LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG--------NPKAKDR- 524
P V + + CG ++ LT G+ GS +LG P +
Sbjct: 485 CPQQVPMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLDHLSLGEEPVPHQQV 544
Query: 525 ----SITVV-EGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETP 579
S T++ L +E + I G+ H A +T+ G YT+G N +GQLG + P
Sbjct: 545 EEALSFTLLGSAPLDQEPLLSIDLGTAHSAAVTASGDCYTFGSNQHGQLGTNTRRGSRAP 604
Query: 580 TFVEALRDRQVESVVCGSSITAAI 603
V+ L ++ V CG + T AI
Sbjct: 605 CKVQGLEGIKMAMVACGDAFTVAI 628
Score = 280 (103.6 bits), Expect = 8.9e-21, P = 8.9e-21
Identities = 78/300 (26%), Positives = 129/300 (43%)
Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
+++W LG G + G+V Q + Q + + LE + +++++ G A +T
Sbjct: 353 LILWEAPPLGAGGGSLLPGAVEQPQPQ---FISRFLEGQSGVTIKHVACGDFFTACLTDR 409
Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
G + +G G +G LGH D+S P +VE L G + V+CG AL+ E++ WG
Sbjct: 410 GIIMTFGSGSNGCLGHGSLTDISQPTIVEALLGYEMVQVACGASHVLALSTERELFAWGR 469
Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
+ G +G R S H P+++ G +V CG + I++ GQ G F
Sbjct: 470 GDSGRLGLGTRES--HSCPQQV-PMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNK 526
Query: 401 LGHGNLQNVSQPKEVESLR-GLKVKSVACGPWHTAAIVDIMVDRCKSNAI--GGKLFTWG 457
LG +L +P + + L + P ++ I + S A+ G +T+G
Sbjct: 527 LGLDHLSLGEEPVPHQQVEEALSFTLLGSAPLDQEPLLSIDLGTAHSAAVTASGDCYTFG 586
Query: 458 DADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG 517
G+LG P V L +CG TV + +VY+ G G+LG
Sbjct: 587 SNQHGQLGTNTRRGSRAPCKVQGLEGIKMAMVACGDAFTVAIGAESEVYSWGKGARGRLG 646
Score = 267 (99.0 bits), Expect = 2.3e-19, P = 2.3e-19
Identities = 97/354 (27%), Positives = 154/354 (43%)
Query: 263 DVQNISLGAKHAALVTKEGEVFCW-----GEGKDGRLGHKVNMDVS--CPKLVECLSGIN 315
+V ++ G A VT+ G + W G G L V + +E SG+
Sbjct: 333 EVVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGGSLLPGAVEQPQPQFISRFLEGQSGVT 392
Query: 316 VQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVA 375
++ V+CG+F T LT G I T+G ++G G S P + + L G + +VA
Sbjct: 393 IKHVACGDFFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQ--PT-IVEALLGYEMVQVA 449
Query: 376 CGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAA 435
CG H +ST +LF +G G G LG G ++ S P++V G + + V CG ++
Sbjct: 450 CGASHVLALSTERELFAWGRGDSGRLGLGTRESHSCPQQVPMPPGQEAQRVVCGI-DSSM 508
Query: 436 IVDI--MVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCV-TRLVDFD-FVQASC 491
I+ + C SN + + H E L T + + +D + +
Sbjct: 509 ILTVPGQALACGSNRFNKLGLDHLSLGEEPVPHQQVEEALSFTLLGSAPLDQEPLLSIDL 568
Query: 492 GRMLTVGLTGLGKVYTMGSAVHGQLG-NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAV 550
G + +T G YT GS HGQLG N + R+ V+G L+ + ++ G
Sbjct: 569 GTAHSAAVTASGDCYTFGSNQHGQLGTNTRRGSRAPCKVQG-LEGIKMAMVACGDAFTVA 627
Query: 551 LTSGGSVYTWGKNANGQLGLGDSQER-ETPTFVEALRDRQVESVVC--GSSITA 601
+ + VY+WGK A G+LG D P ++ V SV C G+++ A
Sbjct: 628 IGAESEVYSWGKGARGRLGRRDEDAGLPRPVQLDETHPYTVTSVSCCHGNTLLA 681
Score = 163 (62.4 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 45/145 (31%), Positives = 68/145 (46%)
Query: 247 QVDALLPKLLESAVMLDVQ---NISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVS 303
QV+ L L + LD + +I LG H+A VT G+ + +G + G+LG
Sbjct: 543 QVEEALSFTLLGSAPLDQEPLLSIDLGTAHSAAVTASGDCYTFGSNQHGQLGTNTRRGSR 602
Query: 304 CPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL- 362
P V+ L GI + V+CG+ T A+ E+Y+WG G +G RR LPR +
Sbjct: 603 APCKVQGLEGIKMAMVACGDAFTVAIGAESEVYSWGKGARGR--LG-RRDEDAGLPRPVQ 659
Query: 363 FDTLDGVRVSKVACGEWHTAIVSTS 387
D V+ V+C +T + S
Sbjct: 660 LDETHPYTVTSVSCCHGNTLLAVRS 684
Score = 139 (54.0 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 43/162 (26%), Positives = 75/162 (46%)
Query: 481 LVDFDFVQASCGRMLTVGLTGLGKVYTM---------GSAVHGQLGNPKAKDRSITVVEG 531
+++ + VQ + GR G+T G++ GS + G + P+ + S +EG
Sbjct: 329 MLNTEVVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGGSLLPGAVEQPQPQFIS-RFLEG 387
Query: 532 KLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVE 591
+ +K ++ G + A LT G + T+G +NG LG G + PT VEAL ++
Sbjct: 388 Q-SGVTIKHVACGDFFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQPTIVEALLGYEMV 446
Query: 592 SVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNC 633
V CG+S A+ + + + R+ G R+ H+C
Sbjct: 447 QVACGASHVLALSTERELFAWGRGDSG--RLGLG-TRESHSC 485
>MGI|MGI:1890646 [details] [associations]
symbol:Nek8 "NIMA (never in mitosis gene a)-related
expressed kinase 8" species:10090 "Mus musculus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004672 "protein kinase
activity" evidence=IEA] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005929 "cilium" evidence=IEA] [GO:0006468 "protein
phosphorylation" evidence=IEA] [GO:0016301 "kinase activity"
evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0042995 "cell projection" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0072372 "primary
cilium" evidence=IDA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 MGI:MGI:1890646 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005524 GO:GO:0005737 GO:GO:0005856 GO:GO:0046872
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0072372 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 KO:K08857
GeneTree:ENSGT00700000104137 CTD:284086 HOGENOM:HOG000006908
HOVERGEN:HBG098799 OMA:EREVFAW OrthoDB:EOG4PZJ65 EMBL:AF407579
EMBL:AK154358 EMBL:BC070457 IPI:IPI00135930 RefSeq:NP_543125.1
UniGene:Mm.23788 ProteinModelPortal:Q91ZR4 SMR:Q91ZR4 IntAct:Q91ZR4
MINT:MINT-1341145 STRING:Q91ZR4 PhosphoSite:Q91ZR4 PRIDE:Q91ZR4
Ensembl:ENSMUST00000017549 GeneID:140859 KEGG:mmu:140859
InParanoid:Q91ZR4 NextBio:370021 Bgee:Q91ZR4 Genevestigator:Q91ZR4
GermOnline:ENSMUSG00000017405 Uniprot:Q91ZR4
Length = 698
Score = 308 (113.5 bits), Expect = 8.1e-24, P = 8.1e-24
Identities = 97/320 (30%), Positives = 143/320 (44%)
Query: 302 VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGAD----LVGERRSRSHW 357
+S P + L+ VQ V+ G Q +T+SG + W GA L G
Sbjct: 327 LSSPLRLPMLNTEVVQ-VAAGRTQKAGVTRSGRLILWEAPPLGAGGGTLLPGAVELPQPQ 385
Query: 358 LPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVES 417
+ + GV + VACG+ TA ++ G + T+G G+ G LGHGNL ++SQP VE+
Sbjct: 386 FVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGNLTDISQPTIVEA 445
Query: 418 LRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTC 477
L G ++ VACG H A+ + G+LF WG D GRLG E P
Sbjct: 446 LLGYEMVQVACGASHVLAL-----------STDGELFAWGRGDGGRLGLGTRESHNCPQQ 494
Query: 478 VTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG--------NPKAKDR----- 524
V + + CG ++ LT G+V GS +LG P +
Sbjct: 495 VPVAPGQEAQRVVCGIDSSMILTSPGRVLACGSNRFNKLGLDHLSLDEEPVPYQQVEEAL 554
Query: 525 SITVV-EGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVE 583
S T + L +E + + G+ H A +T+ G YT+G N +GQLG + P V+
Sbjct: 555 SFTPLGSAPLDQEPLLCVDLGTAHSAAITASGDCYTFGSNQHGQLGTSSRRVSRAPCRVQ 614
Query: 584 ALRDRQVESVVCGSSITAAI 603
L ++ V CG + T A+
Sbjct: 615 GLEGIKMVMVACGDAFTVAV 634
Score = 288 (106.4 bits), Expect = 1.2e-21, P = 1.2e-21
Identities = 79/300 (26%), Positives = 133/300 (44%)
Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
+++W LG G + G+V + Q + + LE + +++++ G A +T
Sbjct: 359 LILWEAPPLGAGGGTLLPGAVELPQPQ---FVSRFLEGQSGVTIKHVACGDLFTACLTDR 415
Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
G + +G G +G LGH D+S P +VE L G + V+CG AL+ GE++ WG
Sbjct: 416 GIIMTFGSGSNGCLGHGNLTDISQPTIVEALLGYEMVQVACGASHVLALSTDGELFAWGR 475
Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
+ G +G R S H P+++ G +V CG + I+++ G++ G F
Sbjct: 476 GDGGRLGLGTRES--HNCPQQV-PVAPGQEAQRVVCGIDSSMILTSPGRVLACGSNRFNK 532
Query: 401 LGHGNLQNVSQPKEVESLR-GLKVKSVACGPWHTAAIVDIMVDRCKSNAI--GGKLFTWG 457
LG +L +P + + L + P ++ + + S AI G +T+G
Sbjct: 533 LGLDHLSLDEEPVPYQQVEEALSFTPLGSAPLDQEPLLCVDLGTAHSAAITASGDCYTFG 592
Query: 458 DADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG 517
G+LG P V L V +CG TV + G+VY+ G G+LG
Sbjct: 593 SNQHGQLGTSSRRVSRAPCRVQGLEGIKMVMVACGDAFTVAVGAEGEVYSWGKGTRGRLG 652
Score = 266 (98.7 bits), Expect = 3.0e-19, P = 3.0e-19
Identities = 103/389 (26%), Positives = 160/389 (41%)
Query: 227 GVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCW 286
GV G + A+ +S L L + +V ++ G A VT+ G + W
Sbjct: 303 GVPRGPVRPAIPPPLSSVYAWGGGLSSPLRLPMLNTEVVQVAAGRTQKAGVTRSGRLILW 362
Query: 287 -----GEGKDGRLGHKVNMDVS--CPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
G G L V + + +E SG+ ++ V+CG+ T LT G I T+G
Sbjct: 363 EAPPLGAGGGTLLPGAVELPQPQFVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFG 422
Query: 340 HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
++G +G P + + L G + +VACG H +ST G+LF +G G G
Sbjct: 423 SGSNGC--LGHGNLTDISQPT-IVEALLGYEMVQVACGASHVLALSTDGELFAWGRGDGG 479
Query: 400 VLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDI-MVDRCKSNAIGGKLFTWGD 458
LG G ++ + P++V G + + V CG + + V C SN
Sbjct: 480 RLGLGTRESHNCPQQVPVAPGQEAQRVVCGIDSSMILTSPGRVLACGSNRFNKLGLDHLS 539
Query: 459 ADKGRLGHVDGERKL--LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
D+ + + E L P L + G + +T G YT GS HGQL
Sbjct: 540 LDEEPVPYQQVEEALSFTPLGSAPLDQEPLLCVDLGTAHSAAITASGDCYTFGSNQHGQL 599
Query: 517 GNPKAK-DRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQE 575
G + R+ V+G + V ++ VAV + G VY+WGK G+LG D
Sbjct: 600 GTSSRRVSRAPCRVQGLEGIKMVMVACGDAFTVAV-GAEGEVYSWGKGTRGRLGRRDEDA 658
Query: 576 R-ETPTFVEALRDRQVESVVC--GSSITA 601
P ++ V SV C G+++ A
Sbjct: 659 GLPRPVQLDETHPYMVTSVSCCHGNTLLA 687
>UNIPROTKB|F1RNC5 [details] [associations]
symbol:NEK8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA]
InterPro:IPR000719 InterPro:IPR002290 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 GeneTree:ENSGT00700000104137
EMBL:FP016171 Ensembl:ENSSSCT00000019338 OMA:EPASHQQ Uniprot:F1RNC5
Length = 700
Score = 308 (113.5 bits), Expect = 8.2e-24, P = 8.2e-24
Identities = 96/321 (29%), Positives = 146/321 (45%)
Query: 302 VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTW-----GHNNHGADLVGERRSRSH 356
+S P + L+ VQ V+ G Q +T+SG + W G GA L G
Sbjct: 329 LSAPLRLPMLNTEVVQ-VAAGRTQKAGVTRSGRLILWEAPPLGAGG-GALLPGAIEQPQP 386
Query: 357 WLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVE 416
+ + GV + VACG+ TA ++ G + T+G G+ G LGHG+L ++SQP VE
Sbjct: 387 QFVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLNDISQPTIVE 446
Query: 417 SLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPT 476
+L G ++ VACG H A+ +R +LF WG D GRLG E P
Sbjct: 447 ALLGYEMVQVACGASHVLAL---STER--------ELFAWGRGDGGRLGLGTRESHCCPQ 495
Query: 477 CVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG-NP----------KAKDRS 525
V + + CG ++ LT G+ GS +LG +P + + +
Sbjct: 496 LVPMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLDPLSLGEEPAPHQQVEEA 555
Query: 526 ITVV---EGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFV 582
+T L +E + + G H +LT+ G YT+G N +GQLG + P V
Sbjct: 556 VTFTPLGSAPLDQEPLLSVDLGPAHSLLLTASGDCYTFGSNQHGQLGTNARRVSRAPCRV 615
Query: 583 EALRDRQVESVVCGSSITAAI 603
+ L+ ++ +V CG + T AI
Sbjct: 616 QGLQGIKISTVACGDAFTVAI 636
Score = 265 (98.3 bits), Expect = 3.9e-19, P = 3.9e-19
Identities = 78/310 (25%), Positives = 133/310 (42%)
Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
+++W LG G + G++ Q + Q + + LE + +++++ G A +T
Sbjct: 361 LILWEAPPLGAGGGALLPGAIEQPQPQ---FVSRFLEGQSGVTIKHVACGDLFTACLTDR 417
Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
G + +G G +G LGH D+S P +VE L G + V+CG AL+ E++ WG
Sbjct: 418 GIIMTFGSGSNGCLGHGSLNDISQPTIVEALLGYEMVQVACGASHVLALSTERELFAWGR 477
Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
+ G +G R S H P+ L G +V CG + I++ GQ G F
Sbjct: 478 GDGGRLGLGTRES--HCCPQ-LVPMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNK 534
Query: 401 LGHGNLQNVSQPKEVESLR-GLKVKSVACGPWHTAAIVDIMVDRCKSNAI--GGKLFTWG 457
LG L +P + + + + P ++ + + S + G +T+G
Sbjct: 535 LGLDPLSLGEEPAPHQQVEEAVTFTPLGSAPLDQEPLLSVDLGPAHSLLLTASGDCYTFG 594
Query: 458 DADKGRLGHVDGERKLLPTC-VTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
G+LG + R C V L +CG TV + G+V++ G G+L
Sbjct: 595 SNQHGQLG-TNARRVSRAPCRVQGLQGIKISTVACGDAFTVAIGAEGEVFSWGKGARGRL 653
Query: 517 GNPKAKDRSI 526
G K +D +
Sbjct: 654 GR-KDEDAGL 662
Score = 256 (95.2 bits), Expect = 3.7e-18, P = 3.7e-18
Identities = 103/391 (26%), Positives = 163/391 (41%)
Query: 227 GVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCW 286
GV G A+ +S T L L + +V ++ G A VT+ G + W
Sbjct: 305 GVPRGPARPAIPPPLSSVYTWGGGLSAPLRLPMLNTEVVQVAAGRTQKAGVTRSGRLILW 364
Query: 287 -----GEGKDGRLGHKVNMDVS--CPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
G G L + + +E SG+ ++ V+CG+ T LT G I T+G
Sbjct: 365 EAPPLGAGGGALLPGAIEQPQPQFVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFG 424
Query: 340 HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
++G G S P + + L G + +VACG H +ST +LF +G G G
Sbjct: 425 SGSNGCLGHGSLNDISQ--PT-IVEALLGYEMVQVACGASHVLALSTERELFAWGRGDGG 481
Query: 400 VLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDI--MVDRCKSNA---IGGKLF 454
LG G ++ P+ V G + + V CG ++ I+ + C SN +G
Sbjct: 482 RLGLGTRESHCCPQLVPMPPGQEAQRVVCGI-DSSMILTVPGQALACGSNRFNKLGLDPL 540
Query: 455 TWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHG 514
+ G+ + V+ P L + G ++ LT G YT GS HG
Sbjct: 541 SLGE-EPAPHQQVEEAVTFTPLGSAPLDQEPLLSVDLGPAHSLLLTASGDCYTFGSNQHG 599
Query: 515 QLG-NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDS 573
QLG N + R+ V+G L+ + ++ G + + G V++WGK A G+LG D
Sbjct: 600 QLGTNARRVSRAPCRVQG-LQGIKISTVACGDAFTVAIGAEGEVFSWGKGARGRLGRKDE 658
Query: 574 QER-ETPTFVEALRDRQVESVVC--GSSITA 601
P ++ V SV C G+++ A
Sbjct: 659 DAGLPRPVQLDETHPYTVTSVSCCHGNTLLA 689
Score = 128 (50.1 bits), Expect = 0.00026, P = 0.00026
Identities = 42/162 (25%), Positives = 73/162 (45%)
Query: 481 LVDFDFVQASCGRMLTVGLTGLGKVYTM---------GSAVHGQLGNPKAKDRSITVVEG 531
+++ + VQ + GR G+T G++ G+ + G + P+ + S +EG
Sbjct: 337 MLNTEVVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGGALLPGAIEQPQPQFVS-RFLEG 395
Query: 532 KLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVE 591
+ +K ++ G A LT G + T+G +NG LG G + PT VEAL ++
Sbjct: 396 Q-SGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLNDISQPTIVEALLGYEMV 454
Query: 592 SVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNC 633
V CG+S A+ + + + R+ G R+ H C
Sbjct: 455 QVACGASHVLALSTERELFAWGRGDGG--RLGLG-TRESHCC 493
>RGD|1306897 [details] [associations]
symbol:Nek8 "NIMA-related kinase 8" species:10116 "Rattus
norvegicus" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0072372
"primary cilium" evidence=IEA;ISO] InterPro:IPR000719
InterPro:IPR002290 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 RGD:1306897 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0072372
PRINTS:PR00633 PROSITE:PS50012 EMBL:CH473948 KO:K08857
GeneTree:ENSGT00700000104137 CTD:284086 OrthoDB:EOG4PZJ65
IPI:IPI00369945 RefSeq:NP_001099274.1 UniGene:Rn.144705
Ensembl:ENSRNOT00000017264 GeneID:287473 KEGG:rno:287473
NextBio:626264 Uniprot:D3ZGQ5
Length = 698
Score = 307 (113.1 bits), Expect = 1.0e-23, P = 1.0e-23
Identities = 92/306 (30%), Positives = 136/306 (44%)
Query: 316 VQSVSCGEFQTCALTKSGEIYTWGH----NNHGADLVGERRSRSHWLPRKLFDTLDGVRV 371
V V+ G Q +T+SG + W G L G + + GV +
Sbjct: 340 VVQVAAGRTQKAGVTRSGRLILWEAPPLGTGGGTLLPGAVELPQPQFVSRFLEGQSGVTI 399
Query: 372 SKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPW 431
VACG+ TA ++ G + T+G G+ G LGHG+L ++SQP VE+L G ++ VACG
Sbjct: 400 KHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQPTIVEALLGYEMVQVACGAS 459
Query: 432 HTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASC 491
H A+ + G+LF WG D GRLG E P V + + + C
Sbjct: 460 HVLAL-----------SADGELFAWGRGDGGRLGLGTRESHNCPQQVPMVPGQEAQRVVC 508
Query: 492 GRMLTVGLTGLGKVYTMGSAVHGQLG--------NPKAKDR-----SITVV-EGKLKEEF 537
G ++ LT G+V GS +LG P + S T + L E
Sbjct: 509 GIDCSMILTSPGRVLACGSNRFNKLGLDCLSLEEEPVPHQQVEEALSFTPLGSAPLDRET 568
Query: 538 VKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGS 597
+ + G+ H A +T+ G+ YT+G N +GQLG + P V+ L ++ V CG
Sbjct: 569 LLCVDLGTAHSAAVTASGACYTFGSNQHGQLGTSSRRVSRAPCRVQGLEGIKMVMVACGD 628
Query: 598 SITAAI 603
+ T AI
Sbjct: 629 AFTVAI 634
Score = 282 (104.3 bits), Expect = 5.5e-21, P = 5.5e-21
Identities = 78/300 (26%), Positives = 133/300 (44%)
Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
+++W LG G + G+V + Q + + LE + +++++ G A +T
Sbjct: 359 LILWEAPPLGTGGGTLLPGAVELPQPQ---FVSRFLEGQSGVTIKHVACGDLFTACLTDR 415
Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
G + +G G +G LGH D+S P +VE L G + V+CG AL+ GE++ WG
Sbjct: 416 GIIMTFGSGSNGCLGHGSLTDISQPTIVEALLGYEMVQVACGASHVLALSADGELFAWGR 475
Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
+ G +G R S H P+++ + G +V CG + I+++ G++ G F
Sbjct: 476 GDGGRLGLGTRES--HNCPQQV-PMVPGQEAQRVVCGIDCSMILTSPGRVLACGSNRFNK 532
Query: 401 LGHGNLQNVSQPKEVESLR-GLKVKSVACGPWHTAAIVDIMVDRCKSNAI--GGKLFTWG 457
LG L +P + + L + P ++ + + S A+ G +T+G
Sbjct: 533 LGLDCLSLEEEPVPHQQVEEALSFTPLGSAPLDRETLLCVDLGTAHSAAVTASGACYTFG 592
Query: 458 DADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG 517
G+LG P V L V +CG TV + G+VY+ G G+LG
Sbjct: 593 SNQHGQLGTSSRRVSRAPCRVQGLEGIKMVMVACGDAFTVAIGAEGEVYSWGKGARGRLG 652
Score = 262 (97.3 bits), Expect = 8.2e-19, P = 8.2e-19
Identities = 95/353 (26%), Positives = 153/353 (43%)
Query: 263 DVQNISLGAKHAALVTKEGEVFCW-----GEGKDGRLGHKVNMDVS--CPKLVECLSGIN 315
+V ++ G A VT+ G + W G G L V + + +E SG+
Sbjct: 339 EVVQVAAGRTQKAGVTRSGRLILWEAPPLGTGGGTLLPGAVELPQPQFVSRFLEGQSGVT 398
Query: 316 VQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVA 375
++ V+CG+ T LT G I T+G ++G G S P + + L G + +VA
Sbjct: 399 IKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQ--PT-IVEALLGYEMVQVA 455
Query: 376 CGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAA 435
CG H +S G+LF +G G G LG G ++ + P++V + G + + V CG +
Sbjct: 456 CGASHVLALSADGELFAWGRGDGGRLGLGTRESHNCPQQVPMVPGQEAQRVVCGIDCSMI 515
Query: 436 IVDI-MVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCV-TRLVDFD-FVQASCG 492
+ V C SN ++ + H E L T + + +D + + G
Sbjct: 516 LTSPGRVLACGSNRFNKLGLDCLSLEEEPVPHQQVEEALSFTPLGSAPLDRETLLCVDLG 575
Query: 493 RMLTVGLTGLGKVYTMGSAVHGQLGNPKAK-DRSITVVEGKLKEEFVKGISSGSYHVAVL 551
+ +T G YT GS HGQLG + R+ V+G + V ++ G +
Sbjct: 576 TAHSAAVTASGACYTFGSNQHGQLGTSSRRVSRAPCRVQGLEGIKMVM-VACGDAFTVAI 634
Query: 552 TSGGSVYTWGKNANGQLGLGDSQER-ETPTFVEALRDRQVESVVC--GSSITA 601
+ G VY+WGK A G+LG D P ++ V SV C G+++ A
Sbjct: 635 GAEGEVYSWGKGARGRLGRRDEDAGLPRPVQLDETHPYTVTSVSCCHGNTLLA 687
Score = 163 (62.4 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 66/234 (28%), Positives = 98/234 (41%)
Query: 358 LPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQ----NVSQPK 413
+P +L + V +VA G A V+ SG+L + G G G L + QP+
Sbjct: 329 IPLRL--PMPNTEVVQVAAGRTQKAGVTRSGRLILWEAPPLGT-GGGTLLPGAVELPQPQ 385
Query: 414 EV----ESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDG 469
V E G+ +K VACG TA + D G + T+G G LGH
Sbjct: 386 FVSRFLEGQSGVTIKHVACGDLFTACLTD-----------RGIIMTFGSGSNGCLGHGSL 434
Query: 470 ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRS---- 525
PT V L+ ++ VQ +CG + L+ G+++ G G+LG + +
Sbjct: 435 TDISQPTIVEALLGYEMVQVACGASHVLALSADGELFAWGRGDGGRLGLGTRESHNCPQQ 494
Query: 526 ITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETP 579
+ +V G+ + V GI +LTS G V G N +LGL E P
Sbjct: 495 VPMVPGQEAQRVVCGIDCSM----ILTSPGRVLACGSNRFNKLGLDCLSLEEEP 544
>UNIPROTKB|E1B827 [details] [associations]
symbol:NEK8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072372 "primary cilium" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0072372 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104137 OMA:EREVFAW EMBL:DAAA02048605
EMBL:DAAA02048606 IPI:IPI00700790 Ensembl:ENSBTAT00000020643
Uniprot:E1B827
Length = 698
Score = 306 (112.8 bits), Expect = 1.3e-23, P = 1.3e-23
Identities = 97/321 (30%), Positives = 142/321 (44%)
Query: 302 VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTW-----GHNNHGADLVGERRSRSH 356
+S P + L+ VQ V+ G Q +T+SG + W G GA L G +
Sbjct: 327 LSAPLRLPMLNTEVVQ-VAAGRTQKAGVTRSGRLILWEAPPLGAGG-GALLPGAVEQQQP 384
Query: 357 WLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVE 416
+ + GV + VACG+ TA ++ G + T+G G+ G LGHG L ++SQP VE
Sbjct: 385 QFVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGGLNDISQPTIVE 444
Query: 417 SLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPT 476
+L G ++ VACG H A+ +R +LF WG D GRLG E P
Sbjct: 445 ALLGYEMVQVACGASHVLAL---STER--------ELFAWGRGDGGRLGLGTRESHSCPQ 493
Query: 477 CVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS-------AVHGQLGNPKAKDRSITVV 529
V + + CG +V LT G+ GS H LG A + +
Sbjct: 494 QVPMPPGQEAQRVICGIDSSVILTVPGQALACGSNRFNKLGLDHLSLGEEPALHQQVEEA 553
Query: 530 -------EGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFV 582
L +E + + G+ H A +T+ G YT+G N +GQLG + P V
Sbjct: 554 LNFTPLGSAPLDQEPLLSVDLGTAHSAAVTASGDCYTFGSNQHGQLGTNARRVSRAPCQV 613
Query: 583 EALRDRQVESVVCGSSITAAI 603
+ L+ ++ V CG + T AI
Sbjct: 614 QGLQGIKIAMVACGDAFTVAI 634
Score = 284 (105.0 bits), Expect = 3.4e-21, P = 3.4e-21
Identities = 81/303 (26%), Positives = 134/303 (44%)
Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
+++W LG G + G+V Q + Q + + LE + +++++ G A +T
Sbjct: 359 LILWEAPPLGAGGGALLPGAVEQQQPQ---FVSRFLEGQSGVTIKHVACGDLFTACLTDR 415
Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
G + +G G +G LGH D+S P +VE L G + V+CG AL+ E++ WG
Sbjct: 416 GIIMTFGSGSNGCLGHGGLNDISQPTIVEALLGYEMVQVACGASHVLALSTERELFAWGR 475
Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
+ G +G R S H P+++ G +V CG + I++ GQ G F
Sbjct: 476 GDGGRLGLGTRES--HSCPQQV-PMPPGQEAQRVICGIDSSVILTVPGQALACGSNRFNK 532
Query: 401 LGHGNLQNVSQP---KEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAI--GGKLFT 455
LG +L +P ++VE L + P ++ + + S A+ G +T
Sbjct: 533 LGLDHLSLGEEPALHQQVEE--ALNFTPLGSAPLDQEPLLSVDLGTAHSAAVTASGDCYT 590
Query: 456 WGDADKGRLGHVDGERKLLPTC-VTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHG 514
+G G+LG + R C V L +CG TV + G+VY+ G G
Sbjct: 591 FGSNQHGQLG-TNARRVSRAPCQVQGLQGIKIAMVACGDAFTVAIGAEGEVYSWGKGARG 649
Query: 515 QLG 517
+LG
Sbjct: 650 RLG 652
Score = 275 (101.9 bits), Expect = 3.2e-20, P = 3.2e-20
Identities = 104/391 (26%), Positives = 165/391 (42%)
Query: 227 GVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCW 286
GV G A+ +S T L L + +V ++ G A VT+ G + W
Sbjct: 303 GVPRGPARPAIPPPLSSVYTWGGGLSAPLRLPMLNTEVVQVAAGRTQKAGVTRSGRLILW 362
Query: 287 -----GEGKDGRLGHKVNMDVS--CPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
G G L V + +E SG+ ++ V+CG+ T LT G I T+G
Sbjct: 363 EAPPLGAGGGALLPGAVEQQQPQFVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFG 422
Query: 340 HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
++G +G P + + L G + +VACG H +ST +LF +G G G
Sbjct: 423 SGSNGC--LGHGGLNDISQPT-IVEALLGYEMVQVACGASHVLALSTERELFAWGRGDGG 479
Query: 400 VLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDI--MVDRCKSNA---IGGKLF 454
LG G ++ S P++V G + + V CG ++ I+ + C SN +G
Sbjct: 480 RLGLGTRESHSCPQQVPMPPGQEAQRVICGI-DSSVILTVPGQALACGSNRFNKLGLDHL 538
Query: 455 TWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHG 514
+ G+ + V+ P L + G + +T G YT GS HG
Sbjct: 539 SLGE-EPALHQQVEEALNFTPLGSAPLDQEPLLSVDLGTAHSAAVTASGDCYTFGSNQHG 597
Query: 515 QLG-NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDS 573
QLG N + R+ V+G L+ + ++ G + + G VY+WGK A G+LG D
Sbjct: 598 QLGTNARRVSRAPCQVQG-LQGIKIAMVACGDAFTVAIGAEGEVYSWGKGARGRLGRRDE 656
Query: 574 QER-ETPTFVEALRDRQVESVVC--GSSITA 601
P ++ + V SV C G+++ A
Sbjct: 657 DAALPRPVQLDETQPYTVTSVSCCHGNTLLA 687
Score = 127 (49.8 bits), Expect = 0.00033, P = 0.00033
Identities = 41/160 (25%), Positives = 70/160 (43%)
Query: 481 LVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN---PKAKDRSITVVEGKLKEE- 536
+++ + VQ + GR G+T G++ + G G P A ++ + E
Sbjct: 335 MLNTEVVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGGALLPGAVEQQQPQFVSRFLEGQ 394
Query: 537 ---FVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESV 593
+K ++ G A LT G + T+G +NG LG G + PT VEAL ++ V
Sbjct: 395 SGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGGLNDISQPTIVEALLGYEMVQV 454
Query: 594 VCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNC 633
CG+S A+ + + + R+ G R+ H+C
Sbjct: 455 ACGASHVLALSTERELFAWGRGDGG--RLGLG-TRESHSC 491
>UNIPROTKB|E2R5W9 [details] [associations]
symbol:RCCD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 OMA:ERPGAWF GeneTree:ENSGT00700000104312
EMBL:AAEX03002330 EMBL:AAEX03002329 Ensembl:ENSCAFT00000035362
Uniprot:E2R5W9
Length = 313
Score = 185 (70.2 bits), Expect = 1.3e-23, Sum P(2) = 1.3e-23
Identities = 44/129 (34%), Positives = 70/129 (54%)
Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
P+ L A L + + LGA+HA L+ + G+VF WG+G+ G+LGH P+L+E L
Sbjct: 88 PRAL--APELRARRLELGAEHALLLDEAGQVFSWGQGRHGQLGHGSLEAEPEPRLLEALQ 145
Query: 313 GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR--SRSHWLPRKLFD-TLDGV 369
G+ V V+ G + + ++++G+IY WG N G + R + +PR+ DG
Sbjct: 146 GLPVAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPSRSLAEDTKTIPREASGLNEDGF 205
Query: 370 RVSKVACGE 378
V + A GE
Sbjct: 206 EVRRTAKGE 214
Score = 160 (61.4 bits), Expect = 1.3e-23, Sum P(2) = 1.3e-23
Identities = 31/74 (41%), Positives = 49/74 (66%)
Query: 362 LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESL--R 419
L D G V K +CG HTA+V+ +G+L+T+G G +G LGH + ++ +P VE +
Sbjct: 230 LLDLPLGADVVKASCGSRHTAVVTGTGELYTWGWGKYGQLGHKDTTSLDRPCRVEYFVDK 289
Query: 420 GLKVKSVACGPWHT 433
L+V++V+CGPW+T
Sbjct: 290 QLQVRAVSCGPWNT 303
Score = 152 (58.6 bits), Expect = 4.6e-15, Sum P(2) = 4.6e-15
Identities = 36/106 (33%), Positives = 56/106 (52%)
Query: 359 PRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESL 418
PR L L R ++ G H ++ +GQ+F++G G G LGHG+L+ +P+ +E+L
Sbjct: 88 PRALAPEL---RARRLELGAEHALLLDEAGQVFSWGQGRHGQLGHGSLEAEPEPRLLEAL 144
Query: 419 RGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRL 464
+GL V VA G WH+ C S G ++ WG + G+L
Sbjct: 145 QGLPVAEVAAGGWHSV---------CVSET--GDIYIWGWNESGQL 179
Score = 142 (55.0 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 34/85 (40%), Positives = 48/85 (56%)
Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECL- 311
P LL+ + DV S G++H A+VT GE++ WG GK G+LGHK + P VE
Sbjct: 228 PALLDLPLGADVVKASCGSRHTAVVTGTGELYTWGWGKYGQLGHKDTTSLDRPCRVEYFV 287
Query: 312 -SGINVQSVSCGEFQTC--ALTKSG 333
+ V++VSCG + T A+ K G
Sbjct: 288 DKQLQVRAVSCGPWNTYVYAVEKEG 312
Score = 133 (51.9 bits), Expect = 7.0e-13, Sum P(2) = 7.0e-13
Identities = 45/174 (25%), Positives = 76/174 (43%)
Query: 263 DVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSG-INVQSVSC 321
DV+ +S + ALVT+E G K P L+ + + +
Sbjct: 43 DVRRVSASWSYTALVTRERPPPALLRPGPRVPGAKAPQPALRPPAPRALAPELRARRLEL 102
Query: 322 GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT 381
G L ++G++++WG HG +G + PR L + L G+ V++VA G WH+
Sbjct: 103 GAEHALLLDEAGQVFSWGQGRHGQ--LGHGSLEAEPEPR-LLEALQGLPVAEVAAGGWHS 159
Query: 382 AIVSTSGQLFTYGDGTFGVLG--HGNLQNVSQ--PKEVESLR--GLKVKSVACG 429
VS +G ++ +G G L +L ++ P+E L G +V+ A G
Sbjct: 160 VCVSETGDIYIWGWNESGQLALPSRSLAEDTKTIPREASGLNEDGFEVRRTAKG 213
Score = 121 (47.7 bits), Expect = 0.00041, P = 0.00041
Identities = 33/114 (28%), Positives = 60/114 (52%)
Query: 272 KHAALVTKEG-EVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALT 330
+ A+ + ++G EV +G+DG + + P L++ G +V SCG T +T
Sbjct: 195 REASGLNEDGFEVRRTAKGEDGAPAPFIAIQ-PFPALLDLPLGADVVKASCGSRHTAVVT 253
Query: 331 KSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG-VRVSKVACGEWHTAI 383
+GE+YTWG +G +G + + S P ++ +D ++V V+CG W+T +
Sbjct: 254 GTGELYTWGWGKYGQ--LGHKDTTSLDRPCRVEYFVDKQLQVRAVSCGPWNTYV 305
Score = 116 (45.9 bits), Expect = 5.2e-19, Sum P(2) = 5.2e-19
Identities = 31/77 (40%), Positives = 39/77 (50%)
Query: 533 LKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQ--V 590
L + VK S GS H AV+T G +YTWG GQLG D+ + P VE D+Q V
Sbjct: 235 LGADVVKA-SCGSRHTAVVTGTGELYTWGWGKYGQLGHKDTTSLDRPCRVEYFVDKQLQV 293
Query: 591 ESVVCGSSITAAICLHK 607
+V CG T + K
Sbjct: 294 RAVSCGPWNTYVYAVEK 310
Score = 93 (37.8 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 25/68 (36%), Positives = 36/68 (52%)
Query: 485 DFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAK--DRSITVVEGKLKEEFVKGIS 542
D V+ASCG T +TG G++YT G +GQLG+ DR V K+ V+ +S
Sbjct: 238 DVVKASCGSRHTAVVTGTGELYTWGWGKYGQLGHKDTTSLDRPCRVEYFVDKQLQVRAVS 297
Query: 543 SGSYHVAV 550
G ++ V
Sbjct: 298 CGPWNTYV 305
Score = 74 (31.1 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 26/75 (34%), Positives = 32/75 (42%)
Query: 420 GLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVT 479
G V +CG HTA + G+L+TWG G+LGH D P V
Sbjct: 236 GADVVKASCGSRHTAVVTGT-----------GELYTWGWGKYGQLGHKDTTSLDRPCRVE 284
Query: 480 RLVDFDF-VQA-SCG 492
VD V+A SCG
Sbjct: 285 YFVDKQLQVRAVSCG 299
>UNIPROTKB|E2QZC2 [details] [associations]
symbol:NEK8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
Ensembl:ENSCAFT00000029828 Uniprot:E2QZC2
Length = 701
Score = 306 (112.8 bits), Expect = 1.4e-23, P = 1.4e-23
Identities = 95/321 (29%), Positives = 147/321 (45%)
Query: 302 VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTW-----GHNNHGADLVGERRSRSH 356
+S P + L+ VQ V+ G Q +T+SG + W G GA L G +
Sbjct: 330 LSAPLRLPMLNTEVVQ-VAAGRTQKAGVTRSGRLILWEAPPLGAGG-GALLPGAVEQQQP 387
Query: 357 WLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVE 416
+ + GV + VACG+ TA ++ G + T+G G+ G LGHG+L ++SQP VE
Sbjct: 388 QFVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLNDISQPTIVE 447
Query: 417 SLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPT 476
+L G ++ VACG H A+ +R +LF WG D GRLG E P
Sbjct: 448 ALLGYEMVQVACGASHVLAL---STER--------ELFAWGRGDGGRLGLGTRESHSCPQ 496
Query: 477 CVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG------------NPKAKDR 524
V+ + + CG ++ LT G+ GS +LG N + ++
Sbjct: 497 QVSMPPGQEAQRVVCGIDSSMILTVPGRALACGSNRFNKLGLDRLSLGEEPAPNQQVEEA 556
Query: 525 -SITVV-EGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFV 582
S T + E + + G+ H A +T+ G YT+G N +GQLG + P V
Sbjct: 557 LSFTPLGSAPFDREPLLSVDLGTAHSAAVTASGDCYTFGSNQHGQLGTNARRVSRAPCQV 616
Query: 583 EALRDRQVESVVCGSSITAAI 603
+ L++ ++ V CG + T A+
Sbjct: 617 QGLQNIKIAMVACGDAFTVAV 637
Score = 286 (105.7 bits), Expect = 2.0e-21, P = 2.0e-21
Identities = 78/301 (25%), Positives = 133/301 (44%)
Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
+++W LG G + G+V Q + Q + + LE + +++++ G A +T
Sbjct: 362 LILWEAPPLGAGGGALLPGAVEQQQPQ---FVSRFLEGQSGVTIKHVACGDLFTACLTDR 418
Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
G + +G G +G LGH D+S P +VE L G + V+CG AL+ E++ WG
Sbjct: 419 GIIMTFGSGSNGCLGHGSLNDISQPTIVEALLGYEMVQVACGASHVLALSTERELFAWGR 478
Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
+ G +G R S H P+++ G +V CG + I++ G+ G F
Sbjct: 479 GDGGRLGLGTRES--HSCPQQV-SMPPGQEAQRVVCGIDSSMILTVPGRALACGSNRFNK 535
Query: 401 LGHGNLQNVSQPKEVESLR-GLKVKSVACGPWHTAAIVDIMVDRCKSNAI--GGKLFTWG 457
LG L +P + + L + P+ ++ + + S A+ G +T+G
Sbjct: 536 LGLDRLSLGEEPAPNQQVEEALSFTPLGSAPFDREPLLSVDLGTAHSAAVTASGDCYTFG 595
Query: 458 DADKGRLGHVDGERKLLPTC-VTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
G+LG + R C V L + +CG TV + G+VY+ G G+L
Sbjct: 596 SNQHGQLG-TNARRVSRAPCQVQGLQNIKIAMVACGDAFTVAVGAEGEVYSWGKGARGRL 654
Query: 517 G 517
G
Sbjct: 655 G 655
Score = 279 (103.3 bits), Expect = 1.2e-20, P = 1.2e-20
Identities = 99/357 (27%), Positives = 157/357 (43%)
Query: 263 DVQNISLGAKHAALVTKEGEVFCW-----GEGKDGRLGHKVNMDVS--CPKLVECLSGIN 315
+V ++ G A VT+ G + W G G L V + +E SG+
Sbjct: 342 EVVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGGALLPGAVEQQQPQFVSRFLEGQSGVT 401
Query: 316 VQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVA 375
++ V+CG+ T LT G I T+G ++G G S P + + L G + +VA
Sbjct: 402 IKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLNDISQ--PT-IVEALLGYEMVQVA 458
Query: 376 CGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAA 435
CG H +ST +LF +G G G LG G ++ S P++V G + + V CG ++
Sbjct: 459 CGASHVLALSTERELFAWGRGDGGRLGLGTRESHSCPQQVSMPPGQEAQRVVCGI-DSSM 517
Query: 436 IVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCV--TRL--VDFD---FVQ 488
I+ + ++ A G F D+ LG + + + T L FD +
Sbjct: 518 ILTVPG---RALACGSNRFNKLGLDRLSLGEEPAPNQQVEEALSFTPLGSAPFDREPLLS 574
Query: 489 ASCGRMLTVGLTGLGKVYTMGSAVHGQLG-NPKAKDRSITVVEGKLKEEFVKGISSGSYH 547
G + +T G YT GS HGQLG N + R+ V+G L+ + ++ G
Sbjct: 575 VDLGTAHSAAVTASGDCYTFGSNQHGQLGTNARRVSRAPCQVQG-LQNIKIAMVACGDAF 633
Query: 548 VAVLTSGGSVYTWGKNANGQLGLGDSQER-ETPTFVEALRDRQVESVVC--GSSITA 601
+ + G VY+WGK A G+LG D P ++ + V SV C G+++ A
Sbjct: 634 TVAVGAEGEVYSWGKGARGRLGRRDEDAGLPRPVQLDEIHPYTVTSVSCCHGNTLLA 690
Score = 128 (50.1 bits), Expect = 0.00026, P = 0.00026
Identities = 41/160 (25%), Positives = 70/160 (43%)
Query: 481 LVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN---PKAKDRSITVVEGKLKEE- 536
+++ + VQ + GR G+T G++ + G G P A ++ + E
Sbjct: 338 MLNTEVVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGGALLPGAVEQQQPQFVSRFLEGQ 397
Query: 537 ---FVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESV 593
+K ++ G A LT G + T+G +NG LG G + PT VEAL ++ V
Sbjct: 398 SGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLNDISQPTIVEALLGYEMVQV 457
Query: 594 VCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNC 633
CG+S A+ + + + R+ G R+ H+C
Sbjct: 458 ACGASHVLALSTERELFAWGRGDGG--RLGLG-TRESHSC 494
>UNIPROTKB|Q8IVU3 [details] [associations]
symbol:HERC6 "Probable E3 ubiquitin-protein ligase HERC6"
species:9606 "Homo sapiens" [GO:0005829 "cytosol" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 HOVERGEN:HBG050878 HSSP:Q9UEP9 EMBL:AF336798
EMBL:AY653201 EMBL:AK000644 EMBL:AK092403 EMBL:AK295832
EMBL:BC035775 EMBL:BC042047 EMBL:AL833664 EMBL:BX647121
IPI:IPI00168048 IPI:IPI00455627 IPI:IPI00554785
RefSeq:NP_001158608.1 RefSeq:NP_060382.3 UniGene:Hs.529317
ProteinModelPortal:Q8IVU3 SMR:Q8IVU3 IntAct:Q8IVU3 STRING:Q8IVU3
PhosphoSite:Q8IVU3 DMDM:74750679 PaxDb:Q8IVU3 PRIDE:Q8IVU3
Ensembl:ENST00000264346 Ensembl:ENST00000273960
Ensembl:ENST00000380265 GeneID:55008 KEGG:hsa:55008 UCSC:uc011cdi.2
UCSC:uc011cdj.2 CTD:55008 GeneCards:GC04P089299 HGNC:HGNC:26072
HPA:HPA035846 MIM:609249 neXtProt:NX_Q8IVU3 PharmGKB:PA134894313
InParanoid:Q8IVU3 OMA:HIFAGTY GenomeRNAi:55008 NextBio:58353
ArrayExpress:Q8IVU3 Bgee:Q8IVU3 Genevestigator:Q8IVU3
Uniprot:Q8IVU3
Length = 1022
Score = 317 (116.6 bits), Expect = 1.8e-23, Sum P(2) = 1.8e-23
Identities = 89/299 (29%), Positives = 148/299 (49%)
Query: 270 GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCAL 329
G +H+ L+ V G+ G+LG + P+ ++ L + V VSCG+ + A+
Sbjct: 31 GERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSLAV 90
Query: 330 TKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQ 389
G ++ WG + G +GE + S + P+K+ TL+ +++ +V+CG +H+ +S Q
Sbjct: 91 CHKGRVFAWGAGSEGQLGIGEFKEIS-FTPKKIM-TLNDIKIIQVSCGHYHSLALSKDSQ 148
Query: 390 LFTYGDGTFGVLGHGN-LQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNA 448
+F++G + G LG G + + P+ V SL G+ + VA G H+ A+ +
Sbjct: 149 VFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL-----------S 197
Query: 449 IGGKLFTWGDADKGRLGHVDGERKLL----PTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
+ G F WG G+L + G + P V L + V SCG T LT GK
Sbjct: 198 LCGTSFGWGSNSAGQLA-LSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGK 256
Query: 505 VYTMGSAVHGQLG-NPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWG 561
V+T G GQLG +P + R +VE ++ + V I GSYH +A + + G V ++G
Sbjct: 257 VFTFGDNRSGQLGYSPTPEKRGPQLVE-RI-DGLVSQIDCGSYHTLAYVHTTGQVVSFG 313
Score = 304 (112.1 bits), Expect = 4.6e-22, Sum P(2) = 4.6e-22
Identities = 85/269 (31%), Positives = 139/269 (51%)
Query: 252 LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVS-CPKLVEC 310
LP+ +++ L V +S G +H+ V +G VF WG G +G+LG ++S PK +
Sbjct: 65 LPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMT 124
Query: 311 LSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR 370
L+ I + VSCG + + AL+K ++++WG N+HG +G + S P+++ +L+G+
Sbjct: 125 LNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLG-KEFPSQASPQRV-RSLEGIP 182
Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV----SQPKEVESLRGLKVKSV 426
+++VA G H+ +S G F +G + G L +NV ++P V +L+ L V +
Sbjct: 183 LAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSG-RNVPVQSNKPLSVGALKNLGVVYI 241
Query: 427 ACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF 486
+CG HTA + D GK+FT+GD G+LG+ K P V R +D
Sbjct: 242 SCGDAHTAVLTQ---D--------GKVFTFGDNRSGQLGYSPTPEKRGPQLVER-IDGLV 289
Query: 487 VQASCGRMLTVGLTGL-GKVYTMGSAVHG 514
Q CG T+ G+V + G HG
Sbjct: 290 SQIDCGSYHTLAYVHTTGQVVSFG---HG 315
Score = 294 (108.6 bits), Expect = 5.6e-21, Sum P(2) = 5.6e-21
Identities = 90/297 (30%), Positives = 142/297 (47%)
Query: 313 GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVS 372
G + + GE + L + + + G N+ G +G R ++ LP + L+ + V
Sbjct: 22 GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRGAQRGELPEPI-QALETLIVD 78
Query: 373 KVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVS-QPKEVESLRGLKVKSVACGPW 431
V+CG+ H+ V G++F +G G+ G LG G + +S PK++ +L +K+ V+CG +
Sbjct: 79 LVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHY 138
Query: 432 HTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG-HVDGERKLLPTCVTRLVDFDFVQAS 490
H+ A+ K + + F+WG G+LG + + P V L Q +
Sbjct: 139 HSLAL-------SKDSQV----FSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVA 187
Query: 491 CGRMLTVGLTGLGKVYTMGSAVHGQLG----N-PKAKDRSITVVEGKLKEEFVKGISSGS 545
G + L+ G + GS GQL N P ++ ++V G LK V IS G
Sbjct: 188 AGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSV--GALKNLGVVYISCGD 245
Query: 546 YHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
H AVLT G V+T+G N +GQLG + E+ P VE + D V + CGS T A
Sbjct: 246 AHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERI-DGLVSQIDCGSYHTLA 301
Score = 244 (91.0 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 71/255 (27%), Positives = 118/255 (46%)
Query: 368 GVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVA 427
G + + A GE H+ ++ T+ ++ + GD + G LG Q P+ +++L L V V+
Sbjct: 22 GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVS 81
Query: 428 CGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD-GERKLLPTCVTRLVDFDF 486
CG H+ A+ C G++F WG +G+LG + E P + L D
Sbjct: 82 CGKEHSLAV-------CHK----GRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKI 130
Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEF-VKGISSGS 545
+Q SCG ++ L+ +V++ G HGQLG K + + E + +++G
Sbjct: 131 IQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGG 190
Query: 546 YHVAVLTSGGSVYTWGKNANGQLGLGDSQ---ERETPTFVEALRDRQVESVVCGSSITAA 602
H L+ G+ + WG N+ GQL L + P V AL++ V + CG + TA
Sbjct: 191 AHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAV 250
Query: 603 ICLH-KSISVGDQSS 616
+ K + GD S
Sbjct: 251 LTQDGKVFTFGDNRS 265
Score = 239 (89.2 bits), Expect = 4.7e-15, Sum P(2) = 4.7e-15
Identities = 60/206 (29%), Positives = 101/206 (49%)
Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
G +G + + + + PK + + + + +S G H+ ++K+ +VF WG+ G+
Sbjct: 100 GAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQ 159
Query: 294 LG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGA-DLVGER 351
LG K + P+ V L GI + V+ G + AL+ G + WG N+ G L G
Sbjct: 160 LGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRN 219
Query: 352 RSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQ 411
P + L + V ++CG+ HTA+++ G++FT+GD G LG+
Sbjct: 220 VPVQSNKPLSV-GALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRG 278
Query: 412 PKEVESLRGLKVKSVACGPWHTAAIV 437
P+ VE + GL V + CG +HT A V
Sbjct: 279 PQLVERIDGL-VSQIDCGSYHTLAYV 303
Score = 142 (55.0 bits), Expect = 9.3e-05, Sum P(2) = 9.3e-05
Identities = 31/102 (30%), Positives = 57/102 (55%)
Query: 240 SVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVN 299
++S V + P + + L V IS G H A++T++G+VF +G+ + G+LG+
Sbjct: 214 ALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPT 273
Query: 300 MDVSCPKLVECLSGINVQSVSCGEFQTCALTKS-GEIYTWGH 340
+ P+LVE + G+ V + CG + T A + G++ ++GH
Sbjct: 274 PEKRGPQLVERIDGL-VSQIDCGSYHTLAYVHTTGQVVSFGH 314
Score = 43 (20.2 bits), Expect = 1.8e-23, Sum P(2) = 1.8e-23
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 719 TSKQSRNVERKPGECLESASSLSSGL-QRW 747
T+ Q + R PG+ L S +S + ++W
Sbjct: 361 TTHQDTSSTRAPGKTLPEISRISQSMAEKW 390
>MGI|MGI:1917200 [details] [associations]
symbol:Rcbtb2 "regulator of chromosome condensation (RCC1)
and BTB (POZ) domain containing protein 2" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651
PROSITE:PS50097 SMART:SM00225 MGI:MGI:1917200 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GeneTree:ENSGT00700000104208 HOGENOM:HOG000065752
HOVERGEN:HBG053261 KO:K11494 CTD:1102 OrthoDB:EOG4M91R6
ChiTaRS:RCBTB2 EMBL:AK031242 EMBL:AK031248 EMBL:AK160881
EMBL:BC003224 IPI:IPI00308981 IPI:IPI00661148 RefSeq:NP_001164165.1
RefSeq:NP_598844.3 UniGene:Mm.280068 ProteinModelPortal:Q99LJ7
SMR:Q99LJ7 STRING:Q99LJ7 PhosphoSite:Q99LJ7 PaxDb:Q99LJ7
PRIDE:Q99LJ7 Ensembl:ENSMUST00000022702 Ensembl:ENSMUST00000110952
Ensembl:ENSMUST00000164822 Ensembl:ENSMUST00000169479
Ensembl:ENSMUST00000169513 Ensembl:ENSMUST00000170677 GeneID:105670
KEGG:mmu:105670 UCSC:uc007upj.2 UCSC:uc007upm.2 InParanoid:Q99LJ7
OMA:QMCSMAV NextBio:357822 Bgee:Q99LJ7 Genevestigator:Q99LJ7
GermOnline:ENSMUSG00000022106 Uniprot:Q99LJ7
Length = 551
Score = 307 (113.1 bits), Expect = 2.9e-23, Sum P(2) = 2.9e-23
Identities = 81/276 (29%), Positives = 136/276 (49%)
Query: 330 TKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEW-HTAIVSTSG 388
T + EI+ G N G VG+ +S PR+L D+L G +++ ++ G H + +T G
Sbjct: 62 TVNDEIFVLGTNCSGCLGVGDIQSTIE--PRRL-DSLTGKKIASLSYGSGPHIVLATTDG 118
Query: 389 QLFTYGDGTFGVLGHGNLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCKSN 447
++FT+G + LG+G + P + + L +V VACG +H+ +
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTS--------- 169
Query: 448 AIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ-ASCGRMLTVGLTGLGKVY 506
G++F WG + G++G + +P VT + V +CG+M ++ + G+VY
Sbjct: 170 --DGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVY 227
Query: 507 TMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANG 566
G +GQLG + ++ L+ V+ ++ G H VLT G +Y WG N+ G
Sbjct: 228 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYG 287
Query: 567 QLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
QLG G+ + PT V +DR +E C S+ T+A
Sbjct: 288 QLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSA 323
Score = 302 (111.4 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 83/293 (28%), Positives = 135/293 (46%)
Query: 278 TKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCAL-TKSGEIY 336
T E+F G G LG P+ ++ L+G + S+S G L T GE++
Sbjct: 62 TVNDEIFVLGTNCSGCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVF 121
Query: 337 TWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG 396
TWGHN + +G + +P + L +V +VACG +H+ ++++ G++F +G
Sbjct: 122 TWGHNAYSQ--LGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYN 179
Query: 397 TFGVLGHGNLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFT 455
G +G G+ N P+ V L+ V ++ACG + A+VD G+++
Sbjct: 180 NSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDT-----------GEVYV 228
Query: 456 WGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQ 515
WG G+LG + P V L + +CG T+ LT G++Y G+ +GQ
Sbjct: 229 WGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQ 288
Query: 516 LGNPKAKDRSITVVEGKLKEEFVKGISSGSYHV-AVLTSGGSVYTWGKNANGQ 567
LG ++S K+ ++ + S H A T GG VY WG+ GQ
Sbjct: 289 LGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ 340
Score = 282 (104.3 bits), Expect = 2.1e-20, Sum P(2) = 2.1e-20
Identities = 75/259 (28%), Positives = 129/259 (49%)
Query: 201 RLVTPTYGS-PLIERKDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESA 259
++ + +YGS P I +V WG +G +G+ N V + L +
Sbjct: 99 KIASLSYGSGPHIVLATTDGEVFTWGHNAYS-QLG---NGTT--NHGLVPCHISTNLSNK 152
Query: 260 VMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVE-CLSGINVQS 318
+++V + G+ H+ ++T +GEVF WG G++G + P+ V CL V +
Sbjct: 153 QVIEV---ACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMN 209
Query: 319 VSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGE 378
++CG+ + A+ +GE+Y WG+N +G +G S + P ++ L G+RV +VACG
Sbjct: 210 IACGQMCSMAVVDTGEVYVWGYNGNGQ--LGLGSSGNQPTPCRVA-ALQGIRVQRVACGY 266
Query: 379 WHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVD 438
HT +++ GQ++ +G ++G LG GN N S P V + ++ AC HT+A
Sbjct: 267 AHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSA--- 323
Query: 439 IMVDRCKSNAIGGKLFTWG 457
K+ GG ++ WG
Sbjct: 324 -----AKTQ--GGHVYMWG 335
Score = 262 (97.3 bits), Expect = 3.7e-18, Sum P(2) = 3.7e-18
Identities = 69/223 (30%), Positives = 111/223 (49%)
Query: 385 STSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVA--CGPWHTAAIVDIMVD 442
+ + ++F G G LG G++Q+ +P+ ++SL G K+ S++ GP A D
Sbjct: 62 TVNDEIFVLGTNCSGCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTD---- 117
Query: 443 RCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCV-TRLVDFDFVQASCGRMLTVGLTG 501
G++FTWG +LG+ L+P + T L + ++ +CG ++ LT
Sbjct: 118 --------GEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTS 169
Query: 502 LGKVYTMGSAVHGQLGNPKAKDRSITV-VEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
G+V+ G GQ+G+ ++ I V G L+ + V I+ G + G VY W
Sbjct: 170 DGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVW 229
Query: 561 GKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
G N NGQLGLG S + TP V AL+ +V+ V CG + T +
Sbjct: 230 GYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 272
Score = 186 (70.5 bits), Expect = 8.7e-10, Sum P(2) = 8.7e-10
Identities = 56/187 (29%), Positives = 86/187 (45%)
Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
+V WG G +G GS + + + L++ V V NI+ G + V
Sbjct: 172 EVFAWGYNN-SGQVGS---GSTANQP--IPRRVTGCLQNKV---VMNIACGQMCSMAVVD 222
Query: 280 EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
GEV+ WG +G+LG + + P V L GI VQ V+CG T LT G+IY WG
Sbjct: 223 TGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWG 282
Query: 340 HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSG-QLFTYGD--G 396
N++G G + ++S+ P + D + + AC HT+ T G ++ +G G
Sbjct: 283 ANSYGQLGTGNKSNQSY--PTPVVVEKDRI-IEIAACHSAHTSAAKTQGGHVYMWGQCRG 339
Query: 397 TFGVLGH 403
+L H
Sbjct: 340 QSVILPH 346
Score = 39 (18.8 bits), Expect = 2.9e-23, Sum P(2) = 2.9e-23
Identities = 6/27 (22%), Positives = 14/27 (51%)
Query: 668 CYNHLQKITHSGRLLKQENQSPRNLLN 694
C NHL +T + + ++ +N ++
Sbjct: 515 CINHLTVVTQTSGFAEMDHDLLKNFIS 541
>ZFIN|ZDB-GENE-020509-1 [details] [associations]
symbol:nek8 "NIMA (never in mitosis gene a)-related
kinase 8" species:7955 "Danio rerio" [GO:0004672 "protein kinase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0061326 "renal tubule development" evidence=IMP]
[GO:0072116 "pronephros formation" evidence=IGI] [GO:0072372
"primary cilium" evidence=IDA] [GO:0001947 "heart looping"
evidence=IGI] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-020509-1 GO:GO:0005524 GO:GO:0005737 GO:GO:0051301
GO:GO:0007067 GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112
GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0072372 GO:GO:0001947 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 KO:K08857 EMBL:AF407580
IPI:IPI00770181 RefSeq:NP_620776.1 UniGene:Dr.12587
ProteinModelPortal:Q90XC2 GeneID:171094 KEGG:dre:171094 CTD:284086
HOGENOM:HOG000006908 HOVERGEN:HBG098799 InParanoid:Q90XC2
NextBio:20797120 ArrayExpress:Q90XC2 GO:GO:0072116 GO:GO:0061326
Uniprot:Q90XC2
Length = 697
Score = 297 (109.6 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 90/319 (28%), Positives = 143/319 (44%)
Query: 302 VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGAD---LVGERRSRSHWL 358
+S P + L+ +Q VS G Q +TKSG + TW + G+ L G
Sbjct: 329 ISTPLRLPMLNTEVIQ-VSLGRTQKMGVTKSGRLITWEAPSVGSGEPTLPGAVEQMQPQF 387
Query: 359 PRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESL 418
+ + GV + V+CG+ T ++ G + T+G G+ G LGHGN +V+QPK VE+L
Sbjct: 388 ISRFLEGQSGVTIKSVSCGDLFTTCLTDRGIIMTFGSGSNGCLGHGNFNDVTQPKIVEAL 447
Query: 419 RGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCV 478
G ++ V+CG H A+ + +R ++F+WG D GRLG + P V
Sbjct: 448 LGYELVQVSCGASHVLAVTN---ER--------EVFSWGRGDNGRLGLATQDSHNCPQQV 496
Query: 479 TRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----KDRSITVVE---- 530
+ DF+ + CG ++ ++ ++ G+ +LG K + S VE
Sbjct: 497 SLPADFEAQRVLCGVDCSMIMSTQHQILACGNNRFNKLGLDKVSGTEEPSSFCQVEEVHL 556
Query: 531 ------GKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEA 584
L E + I G+ H +T G +T+G N +GQLG + P V
Sbjct: 557 FQLVQSAPLNTEKIVYIDIGTAHSVAVTEKGQCFTFGSNQHGQLGCSHRRSSRVPYQVSG 616
Query: 585 LRDRQVESVVCGSSITAAI 603
L+ + CG + T AI
Sbjct: 617 LQG--ITMAACGDAFTLAI 633
Score = 295 (108.9 bits), Expect = 2.1e-22, P = 2.1e-22
Identities = 86/293 (29%), Positives = 137/293 (46%)
Query: 239 GSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKV 298
G+V Q + Q + + LE + ++++S G +T G + +G G +G LGH
Sbjct: 378 GAVEQMQPQ---FISRFLEGQSGVTIKSVSCGDLFTTCLTDRGIIMTFGSGSNGCLGHGN 434
Query: 299 NMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWL 358
DV+ PK+VE L G + VSCG A+T E+++WG ++G +G SH
Sbjct: 435 FNDVTQPKIVEALLGYELVQVSCGASHVLAVTNEREVFSWGRGDNGR--LGLATQDSHNC 492
Query: 359 PRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPK---EV 415
P+++ D +V CG + I+ST Q+ G+ F LG + +P +V
Sbjct: 493 PQQVSLPAD-FEAQRVLCGVDCSMIMSTQHQILACGNNRFNKLGLDKVSGTEEPSSFCQV 551
Query: 416 ESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIG--GKLFTWGDADKGRLGHVDGERKL 473
E + ++ V P +T IV I + S A+ G+ FT+G G+LG
Sbjct: 552 EEVHLFQL--VQSAPLNTEKIVYIDIGTAHSVAVTEKGQCFTFGSNQHGQLGCSHRRSSR 609
Query: 474 LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSI 526
+P V+ L A+CG T+ + G+VYT G G+LG K +D I
Sbjct: 610 VPYQVSGLQGI--TMAACGDAFTLAIGAEGEVYTWGKGARGRLGR-KEEDFGI 659
Score = 241 (89.9 bits), Expect = 1.6e-16, P = 1.6e-16
Identities = 91/353 (25%), Positives = 149/353 (42%)
Query: 263 DVQNISLGAKHAALVTKEGEVFCW-----GEGKDGRLGHKVNMDVS-CPKLVECLSGINV 316
+V +SLG VTK G + W G G+ G M + +E SG+ +
Sbjct: 341 EVIQVSLGRTQKMGVTKSGRLITWEAPSVGSGEPTLPGAVEQMQPQFISRFLEGQSGVTI 400
Query: 317 QSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC 376
+SVSCG+ T LT G I T+G ++G +G P K+ + L G + +V+C
Sbjct: 401 KSVSCGDLFTTCLTDRGIIMTFGSGSNGC--LGHGNFNDVTQP-KIVEALLGYELVQVSC 457
Query: 377 GEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAI 436
G H V+ ++F++G G G LG + + P++V + + V CG + I
Sbjct: 458 GASHVLAVTNEREVFSWGRGDNGRLGLATQDSHNCPQQVSLPADFEAQRVLCGV-DCSMI 516
Query: 437 VDIM--VDRCKSNAIG--GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFD-FVQASC 491
+ + C +N G G + V+ E L + ++ + V
Sbjct: 517 MSTQHQILACGNNRFNKLGLDKVSGTEEPSSFCQVE-EVHLFQLVQSAPLNTEKIVYIDI 575
Query: 492 GRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVL 551
G +V +T G+ +T GS HGQLG + + L+ + + G +
Sbjct: 576 GTAHSVAVTEKGQCFTFGSNQHGQLGCSHRRSSRVPYQVSGLQG--ITMAACGDAFTLAI 633
Query: 552 TSGGSVYTWGKNANGQLGLGDSQER-ETPTFVEALRDRQVESVVC--GSSITA 601
+ G VYTWGK A G+LG + P ++ V SV C G+++ A
Sbjct: 634 GAEGEVYTWGKGARGRLGRKEEDFGIPKPVQLDESHAFTVTSVACCHGNTLLA 686
Score = 139 (54.0 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 60/274 (21%), Positives = 109/274 (39%)
Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV---SQPKEV----ESLRGLKV 423
V +V+ G V+ SG+L T+ + G G L QP+ + E G+ +
Sbjct: 342 VIQVSLGRTQKMGVTKSGRLITWEAPSVGS-GEPTLPGAVEQMQPQFISRFLEGQSGVTI 400
Query: 424 KSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVD 483
KSV+CG T + D G + T+G G LGH + P V L+
Sbjct: 401 KSVSCGDLFTTCLTD-----------RGIIMTFGSGSNGCLGHGNFNDVTQPKIVEALLG 449
Query: 484 FDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEF-VKGIS 542
++ VQ SCG + +T +V++ G +G+LG +D + L +F + +
Sbjct: 450 YELVQVSCGASHVLAVTNEREVFSWGRGDNGRLGLA-TQDSHNCPQQVSLPADFEAQRVL 508
Query: 543 SGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
G ++++ + G N +LGL E P+ + + + +V + +
Sbjct: 509 CGVDCSMIMSTQHQILACGNNRFNKLGLDKVSGTEEPSSFCQVEEVHLFQLVQSAPLNTE 568
Query: 603 ICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNC 636
++ I + ++ F F +H C
Sbjct: 569 KIVYIDIGTAHSVAVTEKGQCFTFGSNQHGQLGC 602
>UNIPROTKB|O95199 [details] [associations]
symbol:RCBTB2 "RCC1 and BTB domain-containing protein 2"
species:9606 "Homo sapiens" [GO:0005087 "Ran guanyl-nucleotide
exchange factor activity" evidence=TAS] InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CH471075 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
HOVERGEN:HBG053261 KO:K11494 EMBL:AF060219 EMBL:AY341245
EMBL:AK315703 EMBL:AL157813 EMBL:BC029052 IPI:IPI00658195
IPI:IPI00941277 PIR:T50663 RefSeq:NP_001259.1 UniGene:Hs.652712
ProteinModelPortal:O95199 SMR:O95199 IntAct:O95199
MINT:MINT-1481780 STRING:O95199 PhosphoSite:O95199 PRIDE:O95199
DNASU:1102 Ensembl:ENST00000344532 GeneID:1102 KEGG:hsa:1102
UCSC:uc001vch.3 CTD:1102 GeneCards:GC13M049063 HGNC:HGNC:1914
HPA:HPA040242 MIM:603524 neXtProt:NX_O95199 PharmGKB:PA26450
InParanoid:O95199 OrthoDB:EOG4M91R6 PhylomeDB:O95199 ChiTaRS:RCBTB2
GenomeRNAi:1102 NextBio:4558 ArrayExpress:O95199 Bgee:O95199
CleanEx:HS_RCBTB2 Genevestigator:O95199 GermOnline:ENSG00000136161
Uniprot:O95199
Length = 551
Score = 300 (110.7 bits), Expect = 1.9e-22, Sum P(2) = 1.9e-22
Identities = 82/276 (29%), Positives = 137/276 (49%)
Query: 330 TKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEW-HTAIVSTSG 388
T + EI+ G N G +G+ +S PR+L D+L+G +++ ++ G H + +T G
Sbjct: 62 TVNDEIFVLGTNCCGCLGLGDVQSTIE--PRRL-DSLNGKKIACLSYGSGPHIVLATTEG 118
Query: 389 QLFTYGDGTFGVLGHGNLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCKSN 447
++FT+G + LG+G + P + + L +V VACG +H+ +
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTS--------- 169
Query: 448 AIGGKLFTWGDADKGRLGHVDGERKLLPTCVTR-LVDFDFVQASCGRMLTVGLTGLGKVY 506
G++F WG + G++G + +P VT L + V +CG+M + + G+VY
Sbjct: 170 --DGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVY 227
Query: 507 TMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANG 566
G +GQLG + ++ L+ V+ ++ G H VLT G VY WG N+ G
Sbjct: 228 VWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 287
Query: 567 QLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
QLG G+ + PT V +DR +E C S+ T+A
Sbjct: 288 QLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSA 323
Score = 296 (109.3 bits), Expect = 5.3e-22, Sum P(2) = 5.3e-22
Identities = 95/350 (27%), Positives = 154/350 (44%)
Query: 228 VLGGDIGGAVDGSVSQNKTQVDA----LLPKLLESAVMLDVQNISLGA--KHAALVTKEG 281
+ GD G V ++S K +D + E + L Q G+ T
Sbjct: 7 LFSGDSGKPVQATLSSLK-MLDVGKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVND 65
Query: 282 EVFCWGEGKDGRLG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCAL-TKSGEIYTWG 339
E+F G G LG V + P+ ++ L+G + +S G L T GE++TWG
Sbjct: 66 EIFVLGTNCCGCLGLGDVQSTIE-PRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWG 124
Query: 340 HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
HN + +G + +P + L +V +VACG +H+ ++++ G++F +G G
Sbjct: 125 HNAYSQ--LGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 182
Query: 400 VLGHGNLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
+G G+ N P+ V L+ V ++ACG A+VD G+++ WG
Sbjct: 183 QVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDT-----------GEVYVWGY 231
Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
G+LG + + P V L + +CG T+ LT G+VY G+ +GQLG
Sbjct: 232 NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGT 291
Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHV-AVLTSGGSVYTWGKNANGQ 567
++S K+ ++ + S H A T GG VY WG+ GQ
Sbjct: 292 GNKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ 340
Score = 255 (94.8 bits), Expect = 2.2e-17, Sum P(2) = 2.2e-17
Identities = 66/221 (29%), Positives = 111/221 (50%)
Query: 385 STSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRC 444
+ + ++F G G LG G++Q+ +P+ ++SL G K +AC + + + +
Sbjct: 62 TVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNG---KKIACLSYGSGPHIVLATTE- 117
Query: 445 KSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCV-TRLVDFDFVQASCGRMLTVGLTGLG 503
G++FTWG +LG+ L+P + T L + ++ +CG ++ LT G
Sbjct: 118 ------GEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDG 171
Query: 504 KVYTMGSAVHGQLGNPKAKDRSITV-VEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGK 562
+V+ G GQ+G+ ++ I V G L+ + V I+ G + G VY WG
Sbjct: 172 EVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGY 231
Query: 563 NANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
N NGQLGLG+S + TP V AL+ +V+ V CG + T +
Sbjct: 232 NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 272
Score = 180 (68.4 bits), Expect = 3.9e-09, Sum P(2) = 3.9e-09
Identities = 51/170 (30%), Positives = 81/170 (47%)
Query: 239 GSVSQNKTQVDALLPKLLESAVMLDVQ-NISLGAKHAALVTKEGEVFCWGEGKDGRLGHK 297
G V T V+ +P+ + + V I+ G V GEV+ WG +G+LG
Sbjct: 182 GQVGSGST-VNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLG 240
Query: 298 VNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHW 357
+ + P V L GI VQ V+CG T LT G++Y WG N++G G + ++S+
Sbjct: 241 NSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 300
Query: 358 LPRKLFDTLDGVRVSKVA-CGEWHTAIVSTSG-QLFTYGD--GTFGVLGH 403
P T++ R+ ++A C HT+ T G ++ +G G +L H
Sbjct: 301 TPV----TVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPH 346
Score = 39 (18.8 bits), Expect = 1.9e-22, Sum P(2) = 1.9e-22
Identities = 6/27 (22%), Positives = 14/27 (51%)
Query: 668 CYNHLQKITHSGRLLKQENQSPRNLLN 694
C NHL +T + + ++ +N ++
Sbjct: 515 CINHLTVVTQTSGFAEMDHDLLKNFIS 541
>ZFIN|ZDB-GENE-090311-16 [details] [associations]
symbol:si:ch211-281g13.4 "si:ch211-281g13.4"
species:7955 "Danio rerio" [GO:0006464 "cellular protein
modification process" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-090311-16 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
eggNOG:COG5021 HOGENOM:HOG000208452 HOVERGEN:HBG050878
GeneTree:ENSGT00700000104312 EMBL:BX321880 IPI:IPI00923765
RefSeq:NP_001139174.1 UniGene:Dr.150552 Ensembl:ENSDART00000138510
GeneID:794323 NextBio:20931808 Uniprot:B8A4S5
Length = 985
Score = 295 (108.9 bits), Expect = 4.2e-22, P = 4.2e-22
Identities = 67/213 (31%), Positives = 116/213 (54%)
Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLG-HKVNMDVSCPKLVECLSGINVQSVSCG 322
V I+ G +H+ ++ +G++F WGE G+LG K + P+ ++ L GI V +S G
Sbjct: 120 VIQIACGDQHSVALSNDGQLFVWGENAHGQLGLRKEQALIQSPQHLQSLCGIPVAQISAG 179
Query: 323 EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTA 382
+ L+ SG ++ WG N+ G +G+ R ++P + +L G + ++CG HTA
Sbjct: 180 GNHSFVLSLSGVVFGWGSNSAGQLGLGDTTDR--FVPT-IVKSLSGKKTVSISCGGEHTA 236
Query: 383 IVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
+S G +FT+G G FG LGH +L++ P+ V L G KV V CG HT +V
Sbjct: 237 TLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLVAELWGSKVSQVTCGRHHTLVLV----- 291
Query: 443 RCKSNAIGGKLFTWGDADKGRLGHVDGERKLLP 475
A+ +++++G +G+LG+ + ++ +P
Sbjct: 292 -----ALTNRIYSFGCGMQGQLGNGEQVKQSVP 319
Score = 273 (101.2 bits), Expect = 9.8e-20, P = 9.8e-20
Identities = 77/246 (31%), Positives = 126/246 (51%)
Query: 289 GKDGRL----GHKVN-MD--VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
G+DG + G KV MD C L + L V ++CG+ + AL+ G+++ WG N
Sbjct: 87 GEDGAVLLADGGKVLLMDKYTVCRPL-KGLDNTKVIQIACGDQHSVALSNDGQLFVWGEN 145
Query: 342 NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVL 401
HG +G R+ ++ + +L G+ V++++ G H+ ++S SG +F +G + G L
Sbjct: 146 AHGQ--LGLRKEQALIQSPQHLQSLCGIPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQL 203
Query: 402 GHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADK 461
G G+ + P V+SL G K S++CG HTA + + GG +FT+G
Sbjct: 204 GLGDTTDRFVPTIVKSLSGKKTVSISCGGEHTATL-----------SKGGTVFTFGSGGF 252
Query: 462 GRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGL-GKVYTMGSAVHGQLGNPK 520
G+LGH + + P V L Q +CGR T+ L L ++Y+ G + GQLGN +
Sbjct: 253 GQLGHNSLKDEHHPRLVAELWGSKVSQVTCGRHHTLVLVALTNRIYSFGCGMQGQLGNGE 312
Query: 521 AKDRSI 526
+S+
Sbjct: 313 QVKQSV 318
Score = 264 (98.0 bits), Expect = 9.2e-19, P = 9.2e-19
Identities = 68/216 (31%), Positives = 106/216 (49%)
Query: 366 LDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQ-PKEVESLRGLKVK 424
LD +V ++ACG+ H+ +S GQLF +G+ G LG Q + Q P+ ++SL G+ V
Sbjct: 115 LDNTKVIQIACGDQHSVALSNDGQLFVWGENAHGQLGLRKEQALIQSPQHLQSLCGIPVA 174
Query: 425 SVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDF 484
++ G H+ + ++ G +F WG G+LG D + +PT V L
Sbjct: 175 QISAGGNHSFVL-----------SLSGVVFGWGSNSAGQLGLGDTTDRFVPTIVKSLSGK 223
Query: 485 DFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSG 544
V SCG T L+ G V+T GS GQLG+ KD + +L V ++ G
Sbjct: 224 KTVSISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLVAELWGSKVSQVTCG 283
Query: 545 SYHVAVLTS-GGSVYTWGKNANGQLGLGDSQERETP 579
+H VL + +Y++G GQLG G+ ++ P
Sbjct: 284 RHHTLVLVALTNRIYSFGCGMQGQLGNGEQVKQSVP 319
Score = 234 (87.4 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 60/183 (32%), Positives = 89/183 (48%)
Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
G G + K Q P+ L+S + V IS G H+ +++ G VF WG G+
Sbjct: 143 GENAHGQLGLRKEQALIQSPQHLQSLCGIPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQ 202
Query: 294 LGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRS 353
LG D P +V+ LSG S+SCG T L+K G ++T+G G +G
Sbjct: 203 LGLGDTTDRFVPTIVKSLSGKKTVSISCGGEHTATLSKGGTVFTFGSGGFGQ--LGHNSL 260
Query: 354 RSHWLPRKLFDTLDGVRVSKVACGEWHTAI-VSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
+ PR L L G +VS+V CG HT + V+ + +++++G G G LG+G S P
Sbjct: 261 KDEHHPR-LVAELWGSKVSQVTCGRHHTLVLVALTNRIYSFGCGMQGQLGNGEQVKQSVP 319
Query: 413 KEV 415
V
Sbjct: 320 LPV 322
Score = 188 (71.2 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 43/120 (35%), Positives = 67/120 (55%)
Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEF---VKGISS 543
+Q +CG +V L+ G+++ G HGQLG K++++ L+ V IS+
Sbjct: 121 IQIACGDQHSVALSNDGQLFVWGENAHGQLG--LRKEQALIQSPQHLQSLCGIPVAQISA 178
Query: 544 GSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
G H VL+ G V+ WG N+ GQLGLGD+ +R PT V++L ++ S+ CG TA +
Sbjct: 179 GGNHSFVLSLSGVVFGWGSNSAGQLGLGDTTDRFVPTIVKSLSGKKTVSISCGGEHTATL 238
>UNIPROTKB|E1B8U7 [details] [associations]
symbol:RCCD1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
OMA:ERPGAWF GeneTree:ENSGT00700000104312 EMBL:DAAA02052163
IPI:IPI00710464 UniGene:Bt.111664 Ensembl:ENSBTAT00000024803
NextBio:20875558 Uniprot:E1B8U7
Length = 377
Score = 175 (66.7 bits), Expect = 5.9e-22, Sum P(2) = 5.9e-22
Identities = 33/86 (38%), Positives = 51/86 (59%)
Query: 259 AVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQS 318
A L + + LGA+HA L+ G+VF WG G+ G+LGH P+L+E L G+ +
Sbjct: 156 APTLRARRLELGAEHALLLDAAGQVFSWGAGRHGQLGHGTLEAEPEPRLLEALQGLRMAE 215
Query: 319 VSCGEFQTCALTKSGEIYTWGHNNHG 344
V+ G + + L+++G+IY WG N G
Sbjct: 216 VAAGGWHSVCLSETGDIYIWGWNESG 241
Score = 161 (61.7 bits), Expect = 5.9e-22, Sum P(2) = 5.9e-22
Identities = 30/74 (40%), Positives = 48/74 (64%)
Query: 362 LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESL--R 419
L D G KV+CG HTA+++ +G+L+T+G G +G LGH + + +P VE +
Sbjct: 294 LLDLSPGSEAVKVSCGSRHTAVLTRTGELYTWGWGKYGQLGHKDTTTLDRPCRVEYFVDK 353
Query: 420 GLKVKSVACGPWHT 433
L+V++V+CGPW+T
Sbjct: 354 QLQVRTVSCGPWNT 367
Score = 150 (57.9 bits), Expect = 4.6e-15, Sum P(2) = 4.6e-15
Identities = 35/114 (30%), Positives = 60/114 (52%)
Query: 353 SRSHWLPRKLF--DTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVS 410
+R++ PR F +R ++ G H ++ +GQ+F++G G G LGHG L+
Sbjct: 141 ARAYVSPRPPFYRPLAPTLRARRLELGAEHALLLDAAGQVFSWGAGRHGQLGHGTLEAEP 200
Query: 411 QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRL 464
+P+ +E+L+GL++ VA G WH+ C S G ++ WG + G+L
Sbjct: 201 EPRLLEALQGLRMAEVAAGGWHSV---------CLSET--GDIYIWGWNESGQL 243
Score = 134 (52.2 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 28/76 (36%), Positives = 45/76 (59%)
Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECL- 311
P LL+ + + +S G++H A++T+ GE++ WG GK G+LGHK + P VE
Sbjct: 292 PALLDLSPGSEAVKVSCGSRHTAVLTRTGELYTWGWGKYGQLGHKDTTTLDRPCRVEYFV 351
Query: 312 -SGINVQSVSCGEFQT 326
+ V++VSCG + T
Sbjct: 352 DKQLQVRTVSCGPWNT 367
Score = 122 (48.0 bits), Expect = 6.9e-18, Sum P(2) = 6.9e-18
Identities = 33/77 (42%), Positives = 40/77 (51%)
Query: 536 EFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQ--VESV 593
E VK +S GS H AVLT G +YTWG GQLG D+ + P VE D+Q V +V
Sbjct: 302 EAVK-VSCGSRHTAVLTRTGELYTWGWGKYGQLGHKDTTTLDRPCRVEYFVDKQLQVRTV 360
Query: 594 VCGSSITAAICLHKSIS 610
CG T + K S
Sbjct: 361 SCGPWNTYVYAVEKEKS 377
Score = 122 (48.0 bits), Expect = 0.00045, P = 0.00045
Identities = 34/115 (29%), Positives = 59/115 (51%)
Query: 271 AKHAALVTKEG-EVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCAL 329
A A+ + ++G EV G+DG + + P L++ G VSCG T L
Sbjct: 258 AGEASGLEEDGSEVKRGSAGEDGAPAPFIAVQ-PFPALLDLSPGSEAVKVSCGSRHTAVL 316
Query: 330 TKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG-VRVSKVACGEWHTAI 383
T++GE+YTWG +G +G + + + P ++ +D ++V V+CG W+T +
Sbjct: 317 TRTGELYTWGWGKYGQ--LGHKDTTTLDRPCRVEYFVDKQLQVRTVSCGPWNTYV 369
Score = 92 (37.4 bits), Expect = 7.5e-09, Sum P(2) = 7.5e-09
Identities = 29/98 (29%), Positives = 42/98 (42%)
Query: 451 GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
G++F+WG G+LGH E + P + L + + G +V L+ G +Y G
Sbjct: 178 GQVFSWGAGRHGQLGHGTLEAEPEPRLLEALQGLRMAEVAAGGWHSVCLSETGDIYIWGW 237
Query: 511 AVHGQLGNPK---AKDRSITVVEGKLKEEFVKGISSGS 545
GQL P A+D T E EE + GS
Sbjct: 238 NESGQLALPTKSLAEDGKTTAGEASGLEEDGSEVKRGS 275
Score = 77 (32.2 bits), Expect = 3.3e-13, Sum P(2) = 3.3e-13
Identities = 23/66 (34%), Positives = 33/66 (50%)
Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAK--DRSITVVEGKLKEEFVKGISSG 544
V+ SCG T LT G++YT G +GQLG+ DR V K+ V+ +S G
Sbjct: 304 VKVSCGSRHTAVLTRTGELYTWGWGKYGQLGHKDTTTLDRPCRVEYFVDKQLQVRTVSCG 363
Query: 545 SYHVAV 550
++ V
Sbjct: 364 PWNTYV 369
Score = 74 (31.1 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 12/42 (28%), Positives = 26/42 (61%)
Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRL 294
P+LLE+ L + ++ G H+ +++ G+++ WG + G+L
Sbjct: 202 PRLLEALQGLRMAEVAAGGWHSVCLSETGDIYIWGWNESGQL 243
Score = 69 (29.3 bits), Expect = 2.2e-12, Sum P(2) = 2.2e-12
Identities = 25/75 (33%), Positives = 32/75 (42%)
Query: 420 GLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVT 479
G + V+CG HTA + G+L+TWG G+LGH D P V
Sbjct: 300 GSEAVKVSCGSRHTAVLTRT-----------GELYTWGWGKYGQLGHKDTTTLDRPCRVE 348
Query: 480 RLVDFDF-VQA-SCG 492
VD V+ SCG
Sbjct: 349 YFVDKQLQVRTVSCG 363
>RGD|1309901 [details] [associations]
symbol:Rccd1 "RCC1 domain containing 1" species:10116 "Rattus
norvegicus" [GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0005886
"plasma membrane" evidence=IEA;ISO] RGD:1309901 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 CTD:91433
OrthoDB:EOG41NTMF GeneTree:ENSGT00700000104312 IPI:IPI00391295
RefSeq:XP_218819.5 UniGene:Rn.225183 Ensembl:ENSRNOT00000029471
GeneID:308760 KEGG:rno:308760 UCSC:RGD:1309901 NextBio:659480
Uniprot:D3ZG92
Length = 378
Score = 230 (86.0 bits), Expect = 4.2e-16, P = 4.2e-16
Identities = 72/231 (31%), Positives = 111/231 (48%)
Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
+RV ++ G H ++ +GQ+F++G G G LGHG+L+ +P+ +E+L+GL++ VA
Sbjct: 161 LRVRQLQLGAEHALLLCEAGQVFSWGGGRHGQLGHGSLEAELEPRLLEALQGLRMAEVAA 220
Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ 488
G WH+ C S G ++ WG + G+L LPT + V+
Sbjct: 221 GGWHSV---------CVSET--GDIYIWGWNESGQLA--------LPT--RSGTEKKTVR 259
Query: 489 ASCGRMLTVGLTGL-GKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH 547
+ GL G + +G+ H P +++ L + VK S GS H
Sbjct: 260 EEATELNDDGLRGEEAALADVGAPAHFIAIQPFP-----ALLDLPLGSDAVKA-SCGSRH 313
Query: 548 VAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVE--SVVCG 596
AV+T G +YTWG GQLG DS + P VE +RQ+E +V CG
Sbjct: 314 TAVVTRTGELYTWGWGKYGQLGHKDSTSSDQPCRVEYFVERQLEVRAVTCG 364
Score = 178 (67.7 bits), Expect = 7.2e-22, Sum P(2) = 7.2e-22
Identities = 39/120 (32%), Positives = 67/120 (55%)
Query: 262 LDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGH-KVNMDVSCPKLVECLSGINVQSVS 320
L V+ + LGA+HA L+ + G+VF WG G+ G+LGH + ++ P+L+E L G+ + V+
Sbjct: 161 LRVRQLQLGAEHALLLCEAGQVFSWGGGRHGQLGHGSLEAELE-PRLLEALQGLRMAEVA 219
Query: 321 CGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTL--DGVRVSKVACGE 378
G + + ++++G+IY WG N G + R R+ L DG+R + A +
Sbjct: 220 AGGWHSVCVSETGDIYIWGWNESGQLALPTRSGTEKKTVREEATELNDDGLRGEEAALAD 279
Score = 157 (60.3 bits), Expect = 7.2e-22, Sum P(2) = 7.2e-22
Identities = 32/74 (43%), Positives = 46/74 (62%)
Query: 362 LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESL--R 419
L D G K +CG HTA+V+ +G+L+T+G G +G LGH + + QP VE R
Sbjct: 295 LLDLPLGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTSSDQPCRVEYFVER 354
Query: 420 GLKVKSVACGPWHT 433
L+V++V CGPW+T
Sbjct: 355 QLEVRAVTCGPWNT 368
Score = 151 (58.2 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 40/132 (30%), Positives = 64/132 (48%)
Query: 197 NESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLL 256
NES +L PT E+K + ++ + L G+ D + + P LL
Sbjct: 240 NESGQLALPTRSGT--EKKTVREEATELNDDGLRGEEAALADVGAPAHFIAIQPF-PALL 296
Query: 257 ESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECL--SGI 314
+ + D S G++H A+VT+ GE++ WG GK G+LGHK + P VE +
Sbjct: 297 DLPLGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTSSDQPCRVEYFVERQL 356
Query: 315 NVQSVSCGEFQT 326
V++V+CG + T
Sbjct: 357 EVRAVTCGPWNT 368
Score = 137 (53.3 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 49/184 (26%), Positives = 82/184 (44%)
Query: 223 IWG-EGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEG 281
+W EG+L V + S + T++ A +P L VQN++ GAK +G
Sbjct: 77 VWASEGLL------VVQRNKSGSGTELQAWVPGSALQGEPLWVQNLASGAK------AQG 124
Query: 282 EVFCWGEGKDGRLG----HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
E E + G L + M P + V+ + G L ++G++++
Sbjct: 125 EDEPGSEPRMGTLPLLPCARAYMTPQPPFCQPLAPELRVRQLQLGAEHALLLCEAGQVFS 184
Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
WG HG +G + PR L + L G+R+++VA G WH+ VS +G ++ +G
Sbjct: 185 WGGGRHGQ--LGHGSLEAELEPR-LLEALQGLRMAEVAAGGWHSVCVSETGDIYIWGWNE 241
Query: 398 FGVL 401
G L
Sbjct: 242 SGQL 245
Score = 79 (32.9 bits), Expect = 9.4e-14, Sum P(2) = 9.4e-14
Identities = 29/97 (29%), Positives = 47/97 (48%)
Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
AD G H + P + + D V+ASCG T +T G++YT G +GQLG+
Sbjct: 278 ADVGAPAHFIAIQPF-PALLDLPLGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGH 336
Query: 519 PKA--KDRSITV---VEGKLKEEFVKGISSGSYHVAV 550
+ D+ V VE +L+ V+ ++ G ++ V
Sbjct: 337 KDSTSSDQPCRVEYFVERQLE---VRAVTCGPWNTYV 370
>UNIPROTKB|Q7ZZC8 [details] [associations]
symbol:nek9 "Serine/threonine-protein kinase Nek9"
species:8355 "Xenopus laevis" [GO:0019901 "protein kinase binding"
evidence=ISS] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005524 GO:GO:0005737 GO:GO:0019901
GO:GO:0051301 GO:GO:0007067 GO:GO:0046872 SUPFAM:SSF56112
GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
HOVERGEN:HBG039572 EMBL:AY271412 UniGene:Xl.77246
ProteinModelPortal:Q7ZZC8 Xenbase:XB-GENE-974105 Uniprot:Q7ZZC8
Length = 944
Score = 299 (110.3 bits), Expect = 7.6e-22, Sum P(2) = 7.6e-22
Identities = 94/317 (29%), Positives = 147/317 (46%)
Query: 265 QNISLGAKHAALVTKEGEVFCW----GEGK-DGRLGHKVNMDVSCPKLVECLSGINVQSV 319
+ + G H A+VT E E++ W G K G+LGH PK VE L G +VQ V
Sbjct: 354 RQVCAGDAHFAVVTVEKELYTWVNMQGGSKLHGQLGHGDRASYRQPKHVEKLQGKSVQKV 413
Query: 320 SCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSR-SHWLPRKLFDTLDGVRVSKVACGE 378
SCG T +T G++Y++G + +G +G +S S L L D V +V+CG+
Sbjct: 414 SCGSDFTVCITDEGQLYSFGSDYYGC--LGVNQSAGSEVLEPLLVDFFLNEPVDQVSCGD 471
Query: 379 WHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAI-V 437
H ++ S ++++G G +G LG + +V P++VE RGL + +V CG + + +
Sbjct: 472 SHIMALTRSKSVYSWGCGEYGRLGLDSEDDVYSPQKVEVQRGLCIVNVCCGSDGSFLLTL 531
Query: 438 DIMVDRC---KSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRM 494
V C + N +G +T G + V L T +L + S GR
Sbjct: 532 TGKVLACGLNEHNKLGLNQYTAGIINHEAFQEVPYTTSL--TLAKQLSFYKIRSISPGRT 589
Query: 495 LTVGLTGLGKVYTMGSAVHGQLG-NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTS 553
T + G++ T GS GQLG K I ++ G L + V +S G T+
Sbjct: 590 HTAAIDERGRLLTFGSNKCGQLGVGDYRKHLGINLLGGPLGGKQVIRVSCGDEFTTAATA 649
Query: 554 GGSVYTWGKNANGQLGL 570
++ WG NG+L +
Sbjct: 650 DNHIFAWGNGGNGRLAM 666
Score = 260 (96.6 bits), Expect = 1.3e-17, Sum P(2) = 1.3e-17
Identities = 99/349 (28%), Positives = 148/349 (42%)
Query: 274 AALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSG 333
A + ++ EV+ WG GK + KL G + V G+ +T
Sbjct: 322 AVVTSRSSEVYVWGGGK-----------TTPQKLDVFKGGWRARQVCAGDAHFAVVTVEK 370
Query: 334 EIYTWGHNNHGADLVGE--RRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
E+YTW + G+ L G+ R+ + K + L G V KV+CG T ++ GQL+
Sbjct: 371 ELYTWVNMQGGSKLHGQLGHGDRASYRQPKHVEKLQGKSVQKVSCGSDFTVCITDEGQLY 430
Query: 392 TYGDGTFGVLGHGNL--QNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAI 449
++G +G LG V +P V+ V V+CG H A+ R KS
Sbjct: 431 SFGSDYYGCLGVNQSAGSEVLEPLLVDFFLNEPVDQVSCGDSHIMALT-----RSKS--- 482
Query: 450 GGKLFTWGDADKGRLGHVDGERKLL-PTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTM 508
+++WG + GRLG +D E + P V V CG + LT GKV
Sbjct: 483 ---VYSWGCGEYGRLG-LDSEDDVYSPQKVEVQRGLCIVNVCCGSDGSFLLTLTGKVLAC 538
Query: 509 GSAVHGQLG---------NPKAKDR-----SITVVEGKLKEEFVKGISSGSYHVAVLTSG 554
G H +LG N +A S+T+ + +L ++ IS G H A +
Sbjct: 539 GLNEHNKLGLNQYTAGIINHEAFQEVPYTTSLTLAK-QLSFYKIRSISPGRTHTAAIDER 597
Query: 555 GSVYTWGKNANGQLGLGDSQERETPTFVEA-LRDRQVESVVCGSSITAA 602
G + T+G N GQLG+GD ++ + L +QV V CG T A
Sbjct: 598 GRLLTFGSNKCGQLGVGDYRKHLGINLLGGPLGGKQVIRVSCGDEFTTA 646
Score = 204 (76.9 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 74/280 (26%), Positives = 124/280 (44%)
Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG--HKVNMDVSCPKLVEC 310
PK +E VQ +S G+ +T EG+++ +G G LG +V P LV+
Sbjct: 399 PKHVEKLQGKSVQKVSCGSDFTVCITDEGQLYSFGSDYYGCLGVNQSAGSEVLEPLLVDF 458
Query: 311 LSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR 370
V VSCG+ ALT+S +Y+WG +G +G + P+K+ + G+
Sbjct: 459 FLNEPVDQVSCGDSHIMALTRSKSVYSWGCGEYGR--LGLDSEDDVYSPQKV-EVQRGLC 515
Query: 371 VSKVACGEWHTAIVSTSGQLFTYG----------DGTFGVLGHGNLQNVSQPKEVESLRG 420
+ V CG + +++ +G++ G T G++ H Q V + +
Sbjct: 516 IVNVCCGSDGSFLLTLTGKVLACGLNEHNKLGLNQYTAGIINHEAFQEVPYTTSLTLAKQ 575
Query: 421 L---KVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL-LPT 476
L K++S++ G HTAAI D +R G+L T+G G+LG D + L +
Sbjct: 576 LSFYKIRSISPGRTHTAAI-D---ER-------GRLLTFGSNKCGQLGVGDYRKHLGINL 624
Query: 477 CVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
L ++ SCG T T ++ G+ +G+L
Sbjct: 625 LGGPLGGKQVIRVSCGDEFTTAATADNHIFAWGNGGNGRL 664
Score = 200 (75.5 bits), Expect = 3.5e-11, Sum P(2) = 3.5e-11
Identities = 74/266 (27%), Positives = 113/266 (42%)
Query: 221 VMIWGEGVL---GGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALV 277
V I EG L G D G + V+Q+ + L P L++ + V +S G H +
Sbjct: 421 VCITDEGQLYSFGSDYYGCL--GVNQSAGS-EVLEPLLVDFFLNEPVDQVSCGDSHIMAL 477
Query: 278 TKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
T+ V+ WG G+ GRLG DV P+ VE G+ + +V CG + LT +G++
Sbjct: 478 TRSKSVYSWGCGEYGRLGLDSEDDVYSPQKVEVQRGLCIVNVCCGSDGSFLLTLTGKVLA 537
Query: 338 WGHNNHG--------ADLVGERRSRS--HWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
G N H A ++ + + L L ++ ++ G HTA +
Sbjct: 538 CGLNEHNKLGLNQYTAGIINHEAFQEVPYTTSLTLAKQLSFYKIRSISPGRTHTAAIDER 597
Query: 388 GQLFTYGDGTFGVLGHGNLQNVSQPKEVES-LRGLKVKSVACGP-WHTAAIVDIMVDRCK 445
G+L T+G G LG G+ + + L G +V V+CG + TAA D
Sbjct: 598 GRLLTFGSNKCGQLGVGDYRKHLGINLLGGPLGGKQVIRVSCGDEFTTAATAD------- 650
Query: 446 SNAIGGKLFTWGDADKGRLGHVDGER 471
+F WG+ GRL ER
Sbjct: 651 -----NHIFAWGNGGNGRLAMTPNER 671
Score = 132 (51.5 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 52/187 (27%), Positives = 86/187 (45%)
Query: 307 LVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTL 366
L + LS ++S+S G T A+ + G + T+G N G VG+ R H L L
Sbjct: 572 LAKQLSFYKIRSISPGRTHTAAIDERGRLLTFGSNKCGQLGVGDYRK--HLGINLLGGPL 629
Query: 367 DGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLG-------HGNLQNVSQPKEV-ESL 418
G +V +V+CG+ T + +F +G+G G L G+ S P+ + SL
Sbjct: 630 GGKQVIRVSCGDEFTTAATADNHIFAWGNGGNGRLAMTPNERPQGSDICTSWPRPIFGSL 689
Query: 419 RGLKVKSVACGPWHTAAIVDIMVDR--CKSNAIGGKLFTWGDA-DKGRLG--HVDGERKL 473
V ++C WHT IV+ +++ +SN+ G + T + G G D +R+
Sbjct: 690 H--HVTDLSCRGWHTILIVEKVLNSKTIRSNSSGLSIGTLAQSCSSGGSGSREEDSDRES 747
Query: 474 LPTCVTR 480
L + +R
Sbjct: 748 LTSDPSR 754
Score = 45 (20.9 bits), Expect = 7.6e-22, Sum P(2) = 7.6e-22
Identities = 16/78 (20%), Positives = 33/78 (42%)
Query: 771 PKTQMSTHSPLLRKISLGSNFIPIASTVEKDLSESNKMLNEEVQRLRDQARNLEKQCQIG 830
P Q T S L ++ + + ++ L N L EVQ L + ++ + Q+
Sbjct: 829 PSFQACTCSTLQEEVRKLQDLVSTYRHEQELLCRENSRLALEVQELNGKLQSAMQMNQVV 888
Query: 831 N---QKVQECQQKIEEAW 845
N + + + Q+++ W
Sbjct: 889 NKHGEAIHQIQKQLSLHW 906
Score = 42 (19.8 bits), Expect = 1.6e-21, Sum P(2) = 1.6e-21
Identities = 35/165 (21%), Positives = 63/165 (38%)
Query: 731 GECLESASSLSSGLQ-----RWGQVSCPIRFKTHCHEKSVEPTPIPKTQ-MSTHS-PL-L 782
G +S SS SG + R S P R E E P T+ M + S P L
Sbjct: 725 GTLAQSCSSGGSGSREEDSDRESLTSDPSRGFRGTIEAEPETGPFNTTENMESSSCPSWL 784
Query: 783 RKISLGSNFIPIASTVEKDLSESNKMLNEEVQRLRDQARNLEKQCQIGNQKVQECQQKIE 842
R+ + FIP+ T +ES++ +Q +R+ + ++ Q+++
Sbjct: 785 RQELEEAEFIPMPDTPNFVSAESSQNGTTSMQDVRETPPDALEKPSFQACTCSTLQEEVR 844
Query: 843 EAWSLARXXXXXXXXXXXXXXXLAVRLHTLSEKISAAKEAKEGVD 887
+ L LA+ + L+ K+ +A + + V+
Sbjct: 845 KLQDLVSTYRHEQELLCRENSRLALEVQELNGKLQSAMQMNQVVN 889
>ZFIN|ZDB-GENE-070615-14 [details] [associations]
symbol:zgc:163136 "zgc:163136" species:7955 "Danio
rerio" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0006464
"cellular protein modification process" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 ZFIN:ZDB-GENE-070615-14 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00700000104312 EMBL:BX321880 IPI:IPI00852092
Ensembl:ENSDART00000113072 OMA:CELECKL Bgee:F1Q5I9 Uniprot:F1Q5I9
Length = 997
Score = 292 (107.8 bits), Expect = 9.0e-22, P = 9.0e-22
Identities = 70/213 (32%), Positives = 113/213 (53%)
Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLG-HKVNMDVSCPKLVECLSGINVQSVSCG 322
V I+ G +H+ +T +G++F WGE G+LG K P+ ++ L GI V +S G
Sbjct: 118 VIQIACGDQHSMALTNDGQLFVWGENALGQLGLRKEQAGTQSPQHLQSLCGIPVAQISAG 177
Query: 323 EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTA 382
+ L+ SG ++ WG N+ G +G+ R ++P + +L G + ++CG HTA
Sbjct: 178 GNHSFVLSLSGVVFGWGSNSAGQLGLGDTTDR--FIPT-IVKSLSGKKTVSISCGGEHTA 234
Query: 383 IVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
+S G +FT+G G FG LGH +L++ P+ V L G KV V CG HT D
Sbjct: 235 TLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLVAELWGSKVSQVTCGRHHTLVFED---- 290
Query: 443 RCKSNAIGGKLFTWGDADKGRLGHVDGERKLLP 475
SN I +++G +G+LG+ + ++ +P
Sbjct: 291 --SSNQI----YSFGCGMQGQLGNGEQVKQSVP 317
Score = 254 (94.5 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 66/216 (30%), Positives = 105/216 (48%)
Query: 366 LDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQ-PKEVESLRGLKVK 424
L+ +V ++ACG+ H+ ++ GQLF +G+ G LG Q +Q P+ ++SL G+ V
Sbjct: 113 LENRQVIQIACGDQHSMALTNDGQLFVWGENALGQLGLRKEQAGTQSPQHLQSLCGIPVA 172
Query: 425 SVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDF 484
++ G H+ + ++ G +F WG G+LG D + +PT V L
Sbjct: 173 QISAGGNHSFVL-----------SLSGVVFGWGSNSAGQLGLGDTTDRFIPTIVKSLSGK 221
Query: 485 DFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSG 544
V SCG T L+ G V+T GS GQLG+ KD + +L V ++ G
Sbjct: 222 KTVSISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLVAELWGSKVSQVTCG 281
Query: 545 SYHVAVLT-SGGSVYTWGKNANGQLGLGDSQERETP 579
+H V S +Y++G GQLG G+ ++ P
Sbjct: 282 RHHTLVFEDSSNQIYSFGCGMQGQLGNGEQVKQSVP 317
Score = 253 (94.1 bits), Expect = 1.4e-17, P = 1.4e-17
Identities = 71/235 (30%), Positives = 118/235 (50%)
Query: 295 GHKVNMDVS--CPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR 352
G + MD S C L + L V ++CG+ + ALT G+++ WG N G +G R+
Sbjct: 96 GKVLVMDQSTVCRPL-KGLENRQVIQIACGDQHSMALTNDGQLFVWGENALGQ--LGLRK 152
Query: 353 SRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
++ + +L G+ V++++ G H+ ++S SG +F +G + G LG G+ + P
Sbjct: 153 EQAGTQSPQHLQSLCGIPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTTDRFIP 212
Query: 413 KEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERK 472
V+SL G K S++CG HTA + + GG +FT+G G+LGH + +
Sbjct: 213 TIVKSLSGKKTVSISCGGEHTATL-----------SKGGTVFTFGSGGFGQLGHNSLKDE 261
Query: 473 LLPTCVTRLVDFDFVQASCGRMLTVGLT-GLGKVYTMGSAVHGQLGNPKAKDRSI 526
P V L Q +CGR T+ ++Y+ G + GQLGN + +S+
Sbjct: 262 HHPRLVAELWGSKVSQVTCGRHHTLVFEDSSNQIYSFGCGMQGQLGNGEQVKQSV 316
Score = 245 (91.3 bits), Expect = 1.0e-16, P = 1.0e-16
Identities = 64/196 (32%), Positives = 93/196 (47%)
Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
+ +WGE LG + K Q P+ L+S + V IS G H+ +++
Sbjct: 137 LFVWGENALG---------QLGLRKEQAGTQSPQHLQSLCGIPVAQISAGGNHSFVLSLS 187
Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
G VF WG G+LG D P +V+ LSG S+SCG T L+K G ++T+G
Sbjct: 188 GVVFGWGSNSAGQLGLGDTTDRFIPTIVKSLSGKKTVSISCGGEHTATLSKGGTVFTFGS 247
Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVS-TSGQLFTYGDGTFG 399
G +G + PR L L G +VS+V CG HT + +S Q++++G G G
Sbjct: 248 GGFGQ--LGHNSLKDEHHPR-LVAELWGSKVSQVTCGRHHTLVFEDSSNQIYSFGCGMQG 304
Query: 400 VLGHGNLQNVSQPKEV 415
LG+G S P V
Sbjct: 305 QLGNGEQVKQSVPLPV 320
Score = 187 (70.9 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 71/255 (27%), Positives = 103/255 (40%)
Query: 344 GADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIV-STSGQLFTYGDGTFGVLG 402
G VG R + W+ R + D E +IV +G + DG V+
Sbjct: 43 GKSYVGFIREGTAWILRLHNEDADEKLEPLQLQNERIRSIVCGEAGAVLLADDGKVLVMD 102
Query: 403 HGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKG 462
V +P ++ L +V +ACG H+ A+ + G+LF WG+ G
Sbjct: 103 QST---VCRP--LKGLENRQVIQIACGDQHSMALTN-----------DGQLFVWGENALG 146
Query: 463 RLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA 521
+LG + P + L Q S G + L+ G V+ GS GQLG
Sbjct: 147 QLGLRKEQAGTQSPQHLQSLCGIPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDT 206
Query: 522 KDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTF 581
DR I + L + IS G H A L+ GG+V+T+G GQLG ++ P
Sbjct: 207 TDRFIPTIVKSLSGKKTVSISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRL 266
Query: 582 VEALRDRQVESVVCG 596
V L +V V CG
Sbjct: 267 VAELWGSKVSQVTCG 281
Score = 180 (68.4 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 49/148 (33%), Positives = 77/148 (52%)
Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
AD G++ +D P + L + +Q +CG ++ LT G+++ G GQLG
Sbjct: 93 ADDGKVLVMDQSTVCRP--LKGLENRQVIQIACGDQHSMALTNDGQLFVWGENALGQLG- 149
Query: 519 PKAKDRSITVVEGKLKEEF---VKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQE 575
K+++ T L+ V IS+G H VL+ G V+ WG N+ GQLGLGD+ +
Sbjct: 150 -LRKEQAGTQSPQHLQSLCGIPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTTD 208
Query: 576 RETPTFVEALRDRQVESVVCGSSITAAI 603
R PT V++L ++ S+ CG TA +
Sbjct: 209 RFIPTIVKSLSGKKTVSISCGGEHTATL 236
Score = 159 (61.0 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 50/156 (32%), Positives = 72/156 (46%)
Query: 227 GVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCW 286
GV+ G G G + T D +P +++S +IS G +H A ++K G VF +
Sbjct: 188 GVVFG-WGSNSAGQLGLGDT-TDRFIPTIVKSLSGKKTVSISCGGEHTATLSKGGTVFTF 245
Query: 287 GEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALT-KSGEIYTWGHNNHGA 345
G G G+LGH D P+LV L G V V+CG T S +IY++G G
Sbjct: 246 GSGGFGQLGHNSLKDEHHPRLVAELWGSKVSQVTCGRHHTLVFEDSSNQIYSFGCGMQGQ 305
Query: 346 DLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT 381
GE+ +S LP L + K+ GE H+
Sbjct: 306 LGNGEQVKQSVPLPVLLPTECTEFTMEKLIAGENHS 341
>ZFIN|ZDB-GENE-061220-11 [details] [associations]
symbol:sergef "secretion regulating guanine
nucleotide exchange factor" species:7955 "Danio rerio" [GO:0050709
"negative regulation of protein secretion" evidence=IEA]
InterPro:IPR027048 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-061220-11 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 HOGENOM:HOG000154414 HOVERGEN:HBG051746
OrthoDB:EOG4J1183 PANTHER:PTHR22870:SF7 EMBL:BC124691
IPI:IPI00490832 UniGene:Dr.91496 InParanoid:Q08BJ6 Uniprot:Q08BJ6
Length = 423
Score = 279 (103.3 bits), Expect = 1.6e-21, P = 1.6e-21
Identities = 111/388 (28%), Positives = 173/388 (44%)
Query: 239 GSVSQNKTQVDALLPKLLESAVMLD-VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHK 297
G + Q + D P+ +ES + + ++ ++ G H+AL++ GE+ G+ G+LG
Sbjct: 48 GQLGQGNAE-DQAEPRRVESGLQEEQIRAVTGGGGHSALISDSGELLVCGQNHKGQLGLG 106
Query: 298 VNMDV----SCPKLVECLSGIN-VQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR 352
+++ +CP L G VQ VSCG T LT G + G N G +G
Sbjct: 107 HTLEIMTFQTCP-----LPGFGRVQQVSCGWDFTIILTGDGLVLACGSNAFGQ--LGVSA 159
Query: 353 SRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
++H L + V+ VA G H + SG ++ +G G + H + + P
Sbjct: 160 EKTHSAEPLLLKSFHEP-VTSVAAGLRHALASTASGCVYQWGTG---LSSHA--KRMLNP 213
Query: 413 KEVESLRGLKVKSVACGPWH-TAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGER 471
+ V S K + G H T V C + G+LF WG G+L + G
Sbjct: 214 QPVPSHLSSKEPCLVPGFAHVTTQKVIAGSAHCACLTVNGELFLWGSNKHGQL--ISGSL 271
Query: 472 KL-LPTCVTR--LVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG--NPKAKDRSI 526
L LP + R L D G V T G+V+T G + +GQLG N + +S
Sbjct: 272 FLPLPVALDRSMLQDERVSDVHSGWTHLVAQTESGRVFTWGRSNYGQLGQTNHSMEKQSC 331
Query: 527 T--VVEGKLKEEFVKG---ISSGSYH-VAVLTSGGSVYTWGKNANGQLGLGDSQERETPT 580
+V ++ + + G IS GS H +AV+ GG V++WG N +G G G Q+ P
Sbjct: 332 DEHLVRSPVEVKALFGATQISCGSEHNLAVV--GGRVFSWGWNEHGMCGDGSLQDITQPQ 389
Query: 581 FVEALRDRQVESVVCGSSITAAICLHKS 608
+ AL D + CG+ + A+C KS
Sbjct: 390 PIPALADAVALLIGCGAGHSMALCSLKS 417
Score = 194 (73.4 bits), Expect = 7.1e-12, P = 7.1e-12
Identities = 62/176 (35%), Positives = 85/176 (48%)
Query: 390 LFTYGDGTFGVLGHGNLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCKSNA 448
L+T+G ++G LG GN ++ ++P+ VES L+ ++++V G H+A I D
Sbjct: 39 LYTWGANSYGQLGQGNAEDQAEPRRVESGLQEEQIRAVTGGGGHSALISD---------- 88
Query: 449 IGGKLFTWGDADKGRLG--HVDGERKLLPTCVTRLVDFDFVQ-ASCGRMLTVGLTGLGKV 505
G+L G KG+LG H E TC L F VQ SCG T+ LTG G V
Sbjct: 89 -SGELLVCGQNHKGQLGLGHTL-EIMTFQTCP--LPGFGRVQQVSCGWDFTIILTGDGLV 144
Query: 506 YTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWG 561
GS GQLG K S + K E V +++G H T+ G VY WG
Sbjct: 145 LACGSNAFGQLGVSAEKTHSAEPLLLKSFHEPVTSVAAGLRHALASTASGCVYQWG 200
Score = 133 (51.9 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 33/97 (34%), Positives = 52/97 (53%)
Query: 505 VYTMGSAVHGQLGNPKAKDRSITV-VEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKN 563
+YT G+ +GQLG A+D++ VE L+EE ++ ++ G H A+++ G + G+N
Sbjct: 39 LYTWGANSYGQLGQGNAEDQAEPRRVESGLQEEQIRAVTGGGGHSALISDSGELLVCGQN 98
Query: 564 ANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSIT 600
GQLGLG + E T +V+ V CG T
Sbjct: 99 HKGQLGLGHTLEIMTFQTCPLPGFGRVQQVSCGWDFT 135
>MGI|MGI:1344037 [details] [associations]
symbol:Rpgr "retinitis pigmentosa GTPase regulator"
species:10090 "Mus musculus" [GO:0001750 "photoreceptor outer
segment" evidence=ISO] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005929
"cilium" evidence=IDA] [GO:0007601 "visual perception"
evidence=ISO;IMP] [GO:0030030 "cell projection organization"
evidence=IEA] [GO:0042384 "cilium assembly" evidence=ISO]
[GO:0042462 "eye photoreceptor cell development" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0050896 "response
to stimulus" evidence=IEA] MGI:MGI:1344037 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005794 GO:GO:0005737 GO:GO:0005813
GO:GO:0005929 GO:GO:0007601 GO:GO:0050896 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042073
eggNOG:COG5184 GO:GO:0036064 GO:GO:0042462
GeneTree:ENSGT00700000104160 GO:GO:0036126 CTD:6103
HOGENOM:HOG000231314 HOVERGEN:HBG026899 ChiTaRS:RPGR EMBL:AF044677
EMBL:AJ238396 EMBL:AJ318464 EMBL:AL671042 EMBL:AK017192
EMBL:BX005236 EMBL:HQ260316 IPI:IPI00122416 IPI:IPI00128188
IPI:IPI00230648 IPI:IPI00230650 RefSeq:NP_001171421.1
RefSeq:NP_035415.1 UniGene:Mm.247556 ProteinModelPortal:Q9R0X5
SMR:Q9R0X5 DIP:DIP-46319N STRING:Q9R0X5 PhosphoSite:Q9R0X5
PRIDE:Q9R0X5 Ensembl:ENSMUST00000044598 GeneID:19893 KEGG:mmu:19893
UCSC:uc009sqj.2 InParanoid:Q9R0X5 NextBio:297416 CleanEx:MM_RPGR
Genevestigator:Q9R0X5 GermOnline:ENSMUSG00000031174 Uniprot:Q9R0X5
Length = 1001
Score = 298 (110.0 bits), Expect = 2.4e-21, Sum P(2) = 2.4e-21
Identities = 91/335 (27%), Positives = 158/335 (47%)
Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQT 326
+S G +H A+VT +++ +G G+LG + P ++ L V+ +CG T
Sbjct: 40 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHT 99
Query: 327 CALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVST 386
T +G +Y G NN G +G+ R + F D ++ +++ G +A ++
Sbjct: 100 LVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIK--QLSAGANTSAALTE 157
Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
G+LF +GD + G +G + NV P EV G + ++CG +H+A +
Sbjct: 158 DGKLFMWGDNSEGQIGLEDKSNVCIPHEVTV--GKPISWISCGYYHSAFVT--------- 206
Query: 447 NAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFD--FVQASCGRMLTVGLTGLGK 504
+ G+L+T+G+ + G+LG + E + R++ +Q +CG TV LT
Sbjct: 207 --MDGELYTFGEPENGKLG-LPNELLMNHRSPQRVLGIPERVIQVACGGGHTVVLTEK-V 262
Query: 505 VYTMGSAVHGQLG-NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKN 563
VY G GQLG + S + ++K++ + IS G H A++T G +YT+G
Sbjct: 263 VYAFGLGQFGQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFGDG 322
Query: 564 ANGQLGLG--DSQERETPTFVEALRDRQVESVVCG 596
+G+LGLG + + PT V+ + CG
Sbjct: 323 RHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACG 357
Score = 278 (102.9 bits), Expect = 2.1e-18, Sum P(3) = 2.1e-18
Identities = 72/247 (29%), Positives = 126/247 (51%)
Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
++ +S GA +A +T++G++F WG+ +G++G + +V P E G + +SCG
Sbjct: 142 IKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPH--EVTVGKPISWISCGY 199
Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
+ + +T GE+YT+G +G + +H P+++ + RV +VACG HT +
Sbjct: 200 YHSAFVTMDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPE--RVIQVACGGGHT-V 256
Query: 384 VSTSGQLFTYGDGTFGVLGHGN-LQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
V T ++ +G G FG LG G L S+PK +E ++ K+ ++CG HTA + ++
Sbjct: 257 VLTEKVVYAFGLGQFGQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTEL--- 313
Query: 443 RCKSNAIGGKLFTWGDADKGRLG-HVDG-ERKLLPTCVTRLVDFDFVQASCG--RMLTVG 498
G L+T+GD G+LG ++ + PT + + F +CG ML
Sbjct: 314 --------GLLYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCHMLVFA 365
Query: 499 LTGLGKV 505
LG +
Sbjct: 366 TPRLGTI 372
Score = 250 (93.1 bits), Expect = 3.7e-16, Sum P(2) = 3.7e-16
Identities = 81/288 (28%), Positives = 134/288 (46%)
Query: 319 VSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGE 378
+SCG+ T +T + ++Y +G NN G +G S++ + L +V ACG
Sbjct: 40 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLG---SKAAIIKPTCIKALKPEKVKLAACGR 96
Query: 379 WHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLK-VKSVACGPWHTAAIV 437
HT + + +G ++ G G LG G+ + ++ +K ++ G +AA+
Sbjct: 97 NHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSAALT 156
Query: 438 DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTV 497
+ GKLF WGD +G++G D +P VT ++ SCG +
Sbjct: 157 E-----------DGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVGKPISWI--SCGYYHSA 203
Query: 498 GLTGLGKVYTMGSAVHGQLGNPKA---KDRSITVVEGKLKEEFVKGISSGSYHVAVLTSG 554
+T G++YT G +G+LG P RS V G + E ++ ++ G H VLT
Sbjct: 204 FVTMDGELYTFGEPENGKLGLPNELLMNHRSPQRVLG-IPERVIQ-VACGGGHTVVLTEK 261
Query: 555 GSVYTWGKNANGQLGLGDSQ-ERETPTFVEALRDRQVESVVCGSSITA 601
VY +G GQLGLG E P +E ++D+++ + CG + TA
Sbjct: 262 -VVYAFGLGQFGQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTA 308
Score = 239 (89.2 bits), Expect = 3.2e-14, Sum P(3) = 3.2e-14
Identities = 75/257 (29%), Positives = 121/257 (47%)
Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC-PKLVECLSGINVQSVSCG 322
V+ + G H + T G V+ G +G+LG D ++V ++ +S G
Sbjct: 89 VKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAG 148
Query: 323 EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTA 382
+ ALT+ G+++ WG N+ G +G + +P ++ T+ G +S ++CG +H+A
Sbjct: 149 ANTSAALTEDGKLFMWGDNSEGQ--IGLEDKSNVCIPHEV--TV-GKPISWISCGYYHSA 203
Query: 383 IVSTSGQLFTYGDGTFGVLGHGN--LQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIM 440
V+ G+L+T+G+ G LG N L N P+ V + +V VACG HT + + +
Sbjct: 204 FVTMDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPE-RVIQVACGGGHTVVLTEKV 262
Query: 441 VDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLT 500
V A G L +G G E K+ + R+ D SCG T +T
Sbjct: 263 V-----YAFG--LGQFGQLGLGTFLFETSEPKI----IERIKDQKICHISCGENHTALMT 311
Query: 501 GLGKVYTMGSAVHGQLG 517
LG +YT G HG+LG
Sbjct: 312 ELGLLYTFGDGRHGKLG 328
Score = 231 (86.4 bits), Expect = 4.0e-14, Sum P(2) = 4.0e-14
Identities = 68/234 (29%), Positives = 116/234 (49%)
Query: 374 VACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHT 433
++CG+ HTAIV+ + +L+ +G +G LG G+ + +P +++L+ KVK ACG HT
Sbjct: 40 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHT 99
Query: 434 AAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFV-QASCG 492
D GG ++ G ++G+LG D + + + D + Q S G
Sbjct: 100 LVSTDT----------GG-VYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAG 148
Query: 493 RMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKE-EFVKGISSGSYHVAVL 551
+ LT GK++ G GQ+G +D+S + ++ + + IS G YH A +
Sbjct: 149 ANTSAALTEDGKLFMWGDNSEGQIG---LEDKSNVCIPHEVTVGKPISWISCGYYHSAFV 205
Query: 552 TSGGSVYTWGKNANGQLGLGDS--QERETPTFVEALRDRQVESVVCGSSITAAI 603
T G +YT+G+ NG+LGL + +P V + +R ++ V CG T +
Sbjct: 206 TMDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPERVIQ-VACGGGHTVVL 258
Score = 42 (19.8 bits), Expect = 2.4e-21, Sum P(2) = 2.4e-21
Identities = 32/148 (21%), Positives = 64/148 (43%)
Query: 691 NLLNLQGSLSEEVKE------EKGALTPSRGQSFTSKQSRNVERKPGECLESASSLSSGL 744
++LN++ ++ EE KE E+G++ + G ++ E +SAS L L
Sbjct: 837 SILNVEDTVEEERKEGEKEIVEEGSIPETEGSETIDITDEKLDEVLKE-EDSASLLQRAL 895
Query: 745 QRWGQVSCPIRFKTHCHEKSVEPTPIPKTQMSTHSPLLRKISLGSNFIPIASTVEKDLSE 804
+ + + P K H +++ + S ++K S F ++ T +K +
Sbjct: 896 REYNEN--P---KGHMYDRVKSSSSEILGGNDPTSKDIKKAKKISFFNRMSLTGQKLMQN 950
Query: 805 SNKMLNEEVQRLRDQARNLEKQCQIGNQ 832
+N L E++ + DQ L+ + NQ
Sbjct: 951 TNDPL-PEIKPIGDQIA-LQSDKKDANQ 976
Score = 41 (19.5 bits), Expect = 3.1e-21, Sum P(2) = 3.1e-21
Identities = 19/81 (23%), Positives = 27/81 (33%)
Query: 949 TEPQQKGTKASKLEYAEQYEPGIYITFTTLPSGQKGLKRVRFSRRRFTEKAAERWWEENQ 1008
T P +GT AS Y P +++ P F +K + EN
Sbjct: 426 TLPPLEGTSASTSAYFYPSSPPFHLSVNNYPEKSPSESMEPLDSDYFEDKMNKDTETENS 485
Query: 1009 VVV-YQKYGIEEYSNLNQNQM 1028
V + +G E LN M
Sbjct: 486 SAVDSENFG-ETNDILNMTHM 505
Score = 40 (19.1 bits), Expect = 4.0e-21, Sum P(2) = 4.0e-21
Identities = 13/60 (21%), Positives = 24/60 (40%)
Query: 674 KITHSGRLLKQENQSPRNLLNLQGSLSEEVKEEKGALTPSRGQSFTSKQSRNVERKPGEC 733
+++ +G+ L Q P + G ++K A GQ+ + N+E K C
Sbjct: 939 RMSLTGQKLMQNTNDPLPEIKPIGDQIALQSDKKDANQNHMGQNLQDSTTPNMEGKSKSC 998
Score = 39 (18.8 bits), Expect = 2.1e-18, Sum P(3) = 2.1e-18
Identities = 16/59 (27%), Positives = 30/59 (50%)
Query: 521 AKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETP 579
A R T+ E K ++ + IS+GS+ + L+ S+ ++ + +L +ERE P
Sbjct: 365 ATPRLGTIDEPKFEDVYEPYISTGSFSINDLSPRSSL---NRSLSARLR---RRERERP 417
>UNIPROTKB|G3V2I3 [details] [associations]
symbol:RCCD1 "RCC1 domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 EMBL:AC068831 HGNC:HGNC:30457
ProteinModelPortal:G3V2I3 SMR:G3V2I3 Ensembl:ENST00000555155
ArrayExpress:G3V2I3 Bgee:G3V2I3 Uniprot:G3V2I3
Length = 374
Score = 167 (63.8 bits), Expect = 2.9e-21, Sum P(2) = 2.9e-21
Identities = 31/84 (36%), Positives = 53/84 (63%)
Query: 262 LDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGH-KVNMDVSCPKLVECLSGINVQSVS 320
L + + LGA+HA L+ G+VF WG G+ G+LGH + ++ P+L+E L G+ + V+
Sbjct: 158 LRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELE-PRLLEALQGLVMAEVA 216
Query: 321 CGEFQTCALTKSGEIYTWGHNNHG 344
G + + ++++G+IY WG N G
Sbjct: 217 AGGWHSVCVSETGDIYIWGWNESG 240
Score = 163 (62.4 bits), Expect = 2.9e-21, Sum P(2) = 2.9e-21
Identities = 31/74 (41%), Positives = 48/74 (64%)
Query: 362 LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESL--R 419
L D G K +CG HTA+V+ +G+L+T+G G +G LGH + ++ +P+ VE +
Sbjct: 291 LLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDRPRRVEYFVDK 350
Query: 420 GLKVKSVACGPWHT 433
L+VK+V CGPW+T
Sbjct: 351 QLQVKAVTCGPWNT 364
Score = 149 (57.5 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 43/132 (32%), Positives = 67/132 (50%)
Query: 197 NESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLL 256
NES +L PT L E + + + +G GGA DG+ + V P LL
Sbjct: 237 NESGQLALPTRN--LAEDGETVAREELNEDGSQVKRTGGAEDGAPAPF-IAVQPF-PALL 292
Query: 257 ESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECL--SGI 314
+ + D S G++H A+VT+ GE++ WG GK G+LGH+ + P+ VE +
Sbjct: 293 DLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDRPRRVEYFVDKQL 352
Query: 315 NVQSVSCGEFQT 326
V++V+CG + T
Sbjct: 353 QVKAVTCGPWNT 364
Score = 145 (56.1 bits), Expect = 5.4e-14, Sum P(2) = 5.4e-14
Identities = 35/114 (30%), Positives = 59/114 (51%)
Query: 353 SRSHWLPRKLF--DTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVS 410
+R++ PR F +R ++ G H ++ +GQ+F++G G G LGHG L+
Sbjct: 140 ARAYVSPRAPFYRPLAPELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAEL 199
Query: 411 QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRL 464
+P+ +E+L+GL + VA G WH+ C S G ++ WG + G+L
Sbjct: 200 EPRLLEALQGLVMAEVAAGGWHSV---------CVSET--GDIYIWGWNESGQL 242
Score = 121 (47.7 bits), Expect = 4.9e-08, Sum P(2) = 4.9e-08
Identities = 26/80 (32%), Positives = 43/80 (53%)
Query: 305 PKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFD 364
P L++ G + SCG T +T++GE+YTWG +G +G + S PR++
Sbjct: 289 PALLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQ--LGHEDTTSLDRPRRVEY 346
Query: 365 TLDG-VRVSKVACGEWHTAI 383
+D ++V V CG W+T +
Sbjct: 347 FVDKQLQVKAVTCGPWNTYV 366
Score = 117 (46.2 bits), Expect = 1.8e-16, Sum P(2) = 1.8e-16
Identities = 29/71 (40%), Positives = 37/71 (52%)
Query: 542 SSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQ--VESVVCGSSI 599
S GS H AV+T G +YTWG GQLG D+ + P VE D+Q V++V CG
Sbjct: 304 SCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDRPRRVEYFVDKQLQVKAVTCGPWN 363
Query: 600 TAAICLHKSIS 610
T + K S
Sbjct: 364 TYVYAVEKGKS 374
Score = 92 (37.4 bits), Expect = 5.5e-09, Sum P(3) = 5.5e-09
Identities = 27/89 (30%), Positives = 42/89 (47%)
Query: 451 GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
G++F+WG G+LGH E +L P + L + + G +V ++ G +Y G
Sbjct: 177 GQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWGW 236
Query: 511 AVHGQLGNPK---AKDRSITVVEGKLKEE 536
GQL P A+D TV +L E+
Sbjct: 237 NESGQLALPTRNLAEDGE-TVAREELNED 264
Score = 85 (35.0 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 17/61 (27%), Positives = 33/61 (54%)
Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
GG G + + + L P+LLE+ L + ++ G H+ V++ G+++ WG + G+
Sbjct: 183 GGGRHGQLGHGTLEAE-LEPRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWGWNESGQ 241
Query: 294 L 294
L
Sbjct: 242 L 242
Score = 82 (33.9 bits), Expect = 7.7e-13, Sum P(2) = 7.7e-13
Identities = 24/68 (35%), Positives = 35/68 (51%)
Query: 485 DFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAK--DRSITVVEGKLKEEFVKGIS 542
D V+ASCG T +T G++YT G +GQLG+ DR V K+ VK ++
Sbjct: 299 DAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDRPRRVEYFVDKQLQVKAVT 358
Query: 543 SGSYHVAV 550
G ++ V
Sbjct: 359 CGPWNTYV 366
Score = 66 (28.3 bits), Expect = 3.5e-11, Sum P(2) = 3.5e-11
Identities = 27/72 (37%), Positives = 35/72 (48%)
Query: 423 VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLV 482
VK+ +CG HTA +V R G+L+TWG G+LGH D P V V
Sbjct: 301 VKA-SCGSRHTA-----VVTRT------GELYTWGWGKYGQLGHEDTTSLDRPRRVEYFV 348
Query: 483 DFDF-VQA-SCG 492
D V+A +CG
Sbjct: 349 DKQLQVKAVTCG 360
Score = 48 (22.0 bits), Expect = 5.5e-09, Sum P(3) = 5.5e-09
Identities = 22/73 (30%), Positives = 31/73 (42%)
Query: 331 KSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEW-HTAIVSTSGQ 389
+ G + +G G +L G R R P L +D RVS W +TA V+ G+
Sbjct: 5 RPGAWFGFGFCGFGQEL-GSGRGRQVHSPSPLRAGVDICRVS----ASWSYTAFVTRGGR 59
Query: 390 LFTYGDGTFGVLG 402
L G + G G
Sbjct: 60 LELSGSAS-GAAG 71
Score = 43 (20.2 bits), Expect = 8.3e-09, Sum P(2) = 8.3e-09
Identities = 12/40 (30%), Positives = 19/40 (47%)
Query: 942 EDSK-VARTEPQQKGTKASKLEYAEQYEPGIYITFTTLPS 980
ED + VAR E + G++ + AE P +I P+
Sbjct: 251 EDGETVAREELNEDGSQVKRTGGAEDGAPAPFIAVQPFPA 290
>UNIPROTKB|A6NED2 [details] [associations]
symbol:RCCD1 "RCC1 domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 EMBL:CH471101 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 EMBL:AC068831
EMBL:BC113826 EMBL:BC140708 EMBL:BC140709 IPI:IPI00399158
RefSeq:NP_001017919.1 RefSeq:NP_291022.2 UniGene:Hs.655895
ProteinModelPortal:A6NED2 SMR:A6NED2 STRING:A6NED2
PhosphoSite:A6NED2 PaxDb:A6NED2 PRIDE:A6NED2
Ensembl:ENST00000394258 Ensembl:ENST00000556618 GeneID:91433
KEGG:hsa:91433 UCSC:uc002bqj.3 CTD:91433 GeneCards:GC15P091498
HGNC:HGNC:30457 HPA:HPA039683 HPA:HPA040776 neXtProt:NX_A6NED2
PharmGKB:PA142671092 eggNOG:NOG305770 HOGENOM:HOG000154085
HOVERGEN:HBG061852 InParanoid:A6NED2 OMA:ERPGAWF OrthoDB:EOG41NTMF
PhylomeDB:A6NED2 GenomeRNAi:91433 NextBio:77244 ArrayExpress:A6NED2
Bgee:A6NED2 CleanEx:HS_RCCD1 Genevestigator:A6NED2 Uniprot:A6NED2
Length = 376
Score = 167 (63.8 bits), Expect = 3.0e-21, Sum P(2) = 3.0e-21
Identities = 31/84 (36%), Positives = 53/84 (63%)
Query: 262 LDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGH-KVNMDVSCPKLVECLSGINVQSVS 320
L + + LGA+HA L+ G+VF WG G+ G+LGH + ++ P+L+E L G+ + V+
Sbjct: 158 LRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELE-PRLLEALQGLVMAEVA 216
Query: 321 CGEFQTCALTKSGEIYTWGHNNHG 344
G + + ++++G+IY WG N G
Sbjct: 217 AGGWHSVCVSETGDIYIWGWNESG 240
Score = 163 (62.4 bits), Expect = 3.0e-21, Sum P(2) = 3.0e-21
Identities = 31/74 (41%), Positives = 48/74 (64%)
Query: 362 LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESL--R 419
L D G K +CG HTA+V+ +G+L+T+G G +G LGH + ++ +P+ VE +
Sbjct: 293 LLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDRPRRVEYFVDK 352
Query: 420 GLKVKSVACGPWHT 433
L+VK+V CGPW+T
Sbjct: 353 QLQVKAVTCGPWNT 366
Score = 145 (56.1 bits), Expect = 5.5e-14, Sum P(2) = 5.5e-14
Identities = 35/114 (30%), Positives = 59/114 (51%)
Query: 353 SRSHWLPRKLF--DTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVS 410
+R++ PR F +R ++ G H ++ +GQ+F++G G G LGHG L+
Sbjct: 140 ARAYVSPRAPFYRPLAPELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAEL 199
Query: 411 QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRL 464
+P+ +E+L+GL + VA G WH+ C S G ++ WG + G+L
Sbjct: 200 EPRLLEALQGLVMAEVAAGGWHSV---------CVSET--GDIYIWGWNESGQL 242
Score = 145 (56.1 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 44/134 (32%), Positives = 68/134 (50%)
Query: 197 NESHRLVTPTYGSPLIERKD-ILKDVMIWGE-GVLGGDIGGAVDGSVSQNKTQVDALLPK 254
NES +L PT L E + + ++ E G GGA DG+ + V P
Sbjct: 237 NESGQLALPTRN--LAEDGETVAREATELNEDGSQVKRTGGAEDGAPAPF-IAVQPF-PA 292
Query: 255 LLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECL--S 312
LL+ + D S G++H A+VT+ GE++ WG GK G+LGH+ + P+ VE
Sbjct: 293 LLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDRPRRVEYFVDK 352
Query: 313 GINVQSVSCGEFQT 326
+ V++V+CG + T
Sbjct: 353 QLQVKAVTCGPWNT 366
Score = 125 (49.1 bits), Expect = 0.00021, P = 0.00021
Identities = 33/115 (28%), Positives = 58/115 (50%)
Query: 271 AKHAALVTKEG-EVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCAL 329
A+ A + ++G +V G +DG + + P L++ G + SCG T +
Sbjct: 257 AREATELNEDGSQVKRTGGAEDGAPAPFIAVQ-PFPALLDLPMGSDAVKASCGSRHTAVV 315
Query: 330 TKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG-VRVSKVACGEWHTAI 383
T++GE+YTWG +G +G + S PR++ +D ++V V CG W+T +
Sbjct: 316 TRTGELYTWGWGKYGQ--LGHEDTTSLDRPRRVEYFVDKQLQVKAVTCGPWNTYV 368
Score = 117 (46.2 bits), Expect = 1.8e-16, Sum P(2) = 1.8e-16
Identities = 29/71 (40%), Positives = 37/71 (52%)
Query: 542 SSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQ--VESVVCGSSI 599
S GS H AV+T G +YTWG GQLG D+ + P VE D+Q V++V CG
Sbjct: 306 SCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDRPRRVEYFVDKQLQVKAVTCGPWN 365
Query: 600 TAAICLHKSIS 610
T + K S
Sbjct: 366 TYVYAVEKGKS 376
Score = 87 (35.7 bits), Expect = 1.8e-08, Sum P(3) = 1.8e-08
Identities = 21/69 (30%), Positives = 33/69 (47%)
Query: 451 GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
G++F+WG G+LGH E +L P + L + + G +V ++ G +Y G
Sbjct: 177 GQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWGW 236
Query: 511 AVHGQLGNP 519
GQL P
Sbjct: 237 NESGQLALP 245
Score = 85 (35.0 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 17/61 (27%), Positives = 33/61 (54%)
Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
GG G + + + L P+LLE+ L + ++ G H+ V++ G+++ WG + G+
Sbjct: 183 GGGRHGQLGHGTLEAE-LEPRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWGWNESGQ 241
Query: 294 L 294
L
Sbjct: 242 L 242
Score = 82 (33.9 bits), Expect = 7.9e-13, Sum P(2) = 7.9e-13
Identities = 24/68 (35%), Positives = 35/68 (51%)
Query: 485 DFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAK--DRSITVVEGKLKEEFVKGIS 542
D V+ASCG T +T G++YT G +GQLG+ DR V K+ VK ++
Sbjct: 301 DAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDRPRRVEYFVDKQLQVKAVT 360
Query: 543 SGSYHVAV 550
G ++ V
Sbjct: 361 CGPWNTYV 368
Score = 66 (28.3 bits), Expect = 3.6e-11, Sum P(2) = 3.6e-11
Identities = 27/72 (37%), Positives = 35/72 (48%)
Query: 423 VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLV 482
VK+ +CG HTA +V R G+L+TWG G+LGH D P V V
Sbjct: 303 VKA-SCGSRHTA-----VVTRT------GELYTWGWGKYGQLGHEDTTSLDRPRRVEYFV 350
Query: 483 DFDF-VQA-SCG 492
D V+A +CG
Sbjct: 351 DKQLQVKAVTCG 362
Score = 48 (22.0 bits), Expect = 1.8e-08, Sum P(3) = 1.8e-08
Identities = 22/73 (30%), Positives = 31/73 (42%)
Query: 331 KSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEW-HTAIVSTSGQ 389
+ G + +G G +L G R R P L +D RVS W +TA V+ G+
Sbjct: 5 RPGAWFGFGFCGFGQEL-GSGRGRQVHSPSPLRAGVDICRVS----ASWSYTAFVTRGGR 59
Query: 390 LFTYGDGTFGVLG 402
L G + G G
Sbjct: 60 LELSGSAS-GAAG 71
>ZFIN|ZDB-GENE-040426-2213 [details] [associations]
symbol:rcc2 "regulator of chromosome condensation
2" species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-040426-2213 GO:GO:0005730 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GeneTree:ENSGT00700000104160 EMBL:BC066628
IPI:IPI00486648 RefSeq:NP_998341.1 UniGene:Dr.828
ProteinModelPortal:Q6NYE2 STRING:Q6NYE2 PRIDE:Q6NYE2
Ensembl:ENSDART00000010647 GeneID:406455 KEGG:dre:406455 CTD:55920
HOGENOM:HOG000232061 HOVERGEN:HBG080538 InParanoid:Q6NYE2
OMA:FGENKLG OrthoDB:EOG4DNF4B NextBio:20818048 ArrayExpress:Q6NYE2
Bgee:Q6NYE2 Uniprot:Q6NYE2
Length = 495
Score = 280 (103.6 bits), Expect = 3.3e-21, P = 3.3e-21
Identities = 93/352 (26%), Positives = 164/352 (46%)
Query: 271 AKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALT 330
A H+ ++T EG+++ WG G+LGH + PKL+E L + + +CG T ALT
Sbjct: 132 AAHSLIITTEGKLWSWGRNDKGQLGHGDTKRLEAPKLIEGLGEEVIVAAACGRNHTLALT 191
Query: 331 KSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQL 390
++G +YT+G N G +G+ L +G + KVACG + IV G L
Sbjct: 192 ENGTVYTFGENKLGQ--LGQGNQTDAVLSPATIQ-YNGQPIVKVACGAEFSMIVDCKGNL 248
Query: 391 FTYGDGTFGVLGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHT--AAIVDI--MVDR-- 443
+++G +G LGH + +++ + +E L + VA T ++ + +V R
Sbjct: 249 YSFGCPEYGQLGHNSDGKFIARAQRIEFDCELIPRRVAIFIEKTKDGQVLPVPNVVARDV 308
Query: 444 -CKSN---AIGG--KLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFD---FVQASCGRM 494
C +N + ++F+WG GRLGH + + +++P V +L DF Q CG
Sbjct: 309 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLV-KLFDFPGRGATQIYCGYQ 367
Query: 495 LTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSG 554
+ L+ +G ++ G + N + L ++ ++ G + ++ +
Sbjct: 368 CSFALSEMGGLFFWG------VTNTSRESTMYPKAVQDLCGWKIRSLACGKSSI-IVAAD 420
Query: 555 GSVYTWGKNAN-GQLGLGDSQERETPTF--VEALRDRQVESVVCGSSITAAI 603
S +WG + G+LG GD++ + + T V+ L E VV G S + I
Sbjct: 421 DSTISWGPSPTFGELGYGDNKPKSSTTAQEVKTLDGVYSEQVVMGYSHSLVI 472
Score = 186 (70.5 bits), Expect = 7.7e-11, P = 7.7e-11
Identities = 55/196 (28%), Positives = 91/196 (46%)
Query: 383 IVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
+ GQL +G + ++G + PK+ + R L GP + D+ V
Sbjct: 72 VPKVKGQLLIFGATNWDLIGRKEV-----PKQQAAFRNLGQN--LWGPHRYGCLSDVQVS 124
Query: 443 -----RCKSNAI----GGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR 493
C ++++ GKL++WG DKG+LGH D +R P + L + V A+CGR
Sbjct: 125 CVVSGPCAAHSLIITTEGKLWSWGRNDKGQLGHGDTKRLEAPKLIEGLGEEVIVAAACGR 184
Query: 494 MLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTS 553
T+ LT G VYT G GQLG D ++ + + + ++ G+ ++
Sbjct: 185 NHTLALTENGTVYTFGENKLGQLGQGNQTDAVLSPATIQYNGQPIVKVACGAEFSMIVDC 244
Query: 554 GGSVYTWGKNANGQLG 569
G++Y++G GQLG
Sbjct: 245 KGNLYSFGCPEYGQLG 260
Score = 179 (68.1 bits), Expect = 4.5e-10, P = 4.5e-10
Identities = 84/327 (25%), Positives = 146/327 (44%)
Query: 305 PKLVECLSGINVQSVSCGEFQTCAL--TKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL 362
P CLS + V V G +L T G++++WG N+ G +G ++ P KL
Sbjct: 112 PHRYGCLSDVQVSCVVSGPCAAHSLIITTEGKLWSWGRNDKGQ--LGHGDTKRLEAP-KL 168
Query: 363 FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN-VSQPKEVESLRGL 421
+ L + ACG HT ++ +G ++T+G+ G LG GN + V P ++ G
Sbjct: 169 IEGLGEEVIVAAACGRNHTLALTENGTVYTFGENKLGQLGQGNQTDAVLSPATIQ-YNGQ 227
Query: 422 KVKSVACGPWHTAAIVDIMVDRCKSN--AIG----GKLFTWGDADK-GRLGHVDGERKLL 474
+ VACG A ++VD CK N + G G+L D R ++ + +L+
Sbjct: 228 PIVKVACG-----AEFSMIVD-CKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEFDCELI 281
Query: 475 PTCVTRLVDF----------DFV--QASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAK 522
P V ++ + V +CG T+ L +V++ G +G+LG+ + K
Sbjct: 282 PRRVAIFIEKTKDGQVLPVPNVVARDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQK 341
Query: 523 DRSITVVEGKLKEEFVKGISS--GSYHVA-VLTSGGSVYTWGKNANGQLGLGDSQERETP 579
D + + KL + +G + Y + L+ G ++ WG + RE+
Sbjct: 342 DEMVPRLV-KLFDFPGRGATQIYCGYQCSFALSEMGGLFFWGVT---------NTSREST 391
Query: 580 TFVEALRDR---QVESVVCG-SSITAA 602
+ +A++D ++ S+ CG SSI A
Sbjct: 392 MYPKAVQDLCGWKIRSLACGKSSIIVA 418
>TAIR|locus:2076532 [details] [associations]
symbol:AT3G02300 "AT3G02300" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0008536
"Ran GTPase binding" evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415
EMBL:CP002686 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 IPI:IPI00534317
RefSeq:NP_186879.2 UniGene:At.41157 ProteinModelPortal:F4J609
SMR:F4J609 EnsemblPlants:AT3G02300.1 GeneID:821167
KEGG:ath:AT3G02300 OMA:LKELCEF Uniprot:F4J609
Length = 471
Score = 278 (102.9 bits), Expect = 4.4e-21, P = 4.4e-21
Identities = 99/361 (27%), Positives = 154/361 (42%)
Query: 266 NISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQ 325
+IS G +H A V +G +F WG + G+LG + PK V+ L V+ VSCG F
Sbjct: 65 DISCGREHTAAVASDGSLFAWGANEYGQLGDGTEVGRKHPKKVKQLQSEFVKFVSCGAFC 124
Query: 326 TCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR-VSKVACGEWHTAIV 384
T A+ + E G + V + S+ LPR + +V+CG H +
Sbjct: 125 TAAIAEPRE--NDGTLSTSRLWVWGQNQGSN-LPRLFSGAFPATTAIRQVSCGTAHVVAL 181
Query: 385 STSGQLFTYGDGTFGVLGHG-NLQNVSQPKEV--------ESLRGLKVKSVACGPWHTAA 435
S G L +G G LG G + + P+ + E+ +K+ ++CG +HTAA
Sbjct: 182 SEEGLLQAWGYNEQGQLGRGVTCEGLQAPRVINAYAKFLDEAPELVKIMQLSCGEYHTAA 241
Query: 436 IVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD---GERKLLPTCVTRLVDFDFVQASCG 492
+ D G+++TWG G+LGHV G+++L+P V L + +CG
Sbjct: 242 LSD-----------AGEVYTWGLGSMGQLGHVSLQSGDKELIPRRVVGLDGVSMKEVACG 290
Query: 493 RMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGK---LKE-------EFVKGIS 542
+ T L+ G +Y G GQLG +V G L+ V+ ++
Sbjct: 291 GVHTCALSLEGALYAWGGGQAGQLGLGPQSGFFFSVSNGSEMLLRNVPVLVIPTDVRLVA 350
Query: 543 SGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
G H V G + WG N+ GQ S P+ V+ QV + G +A
Sbjct: 351 CGHSHTLVYMREGRICGWGYNSYGQAANEKSSYAWYPSPVDWCVG-QVRKLAAGGGHSAV 409
Query: 603 I 603
+
Sbjct: 410 L 410
Score = 272 (100.8 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 94/298 (31%), Positives = 126/298 (42%)
Query: 330 TKSGEIYTWGHNNHGADLVGERRSRSH---WLPRKLFDTLDGV--RVSKVACGEWHTAIV 384
TKS IY WG+N G E+ LP +LF G R ++CG HTA V
Sbjct: 18 TKSA-IYVWGYNQSGQTGRNEQEKLLRIPKQLPPELFGCPAGANSRWLDISCGREHTAAV 76
Query: 385 STSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRC 444
++ G LF +G +G LG G PK+V+ L+ VK V+CG + TAAI + R
Sbjct: 77 ASDGSLFAWGANEYGQLGDGTEVGRKHPKKVKQLQSEFVKFVSCGAFCTAAIAE---PRE 133
Query: 445 KSNAIG-GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLG 503
+ +L+ WG L + T + Q SCG V L+ G
Sbjct: 134 NDGTLSTSRLWVWGQNQGSNLPRLFSGAFPATTAIR--------QVSCGTAHVVALSEEG 185
Query: 504 KVYTMGSAVHGQLGNPKAKD-----RSITVVEGKLKE--EFVK--GISSGSYHVAVLTSG 554
+ G GQLG + R I L E E VK +S G YH A L+
Sbjct: 186 LLQAWGYNEQGQLGRGVTCEGLQAPRVINAYAKFLDEAPELVKIMQLSCGEYHTAALSDA 245
Query: 555 GSVYTWGKNANGQLG---LGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSI 609
G VYTWG + GQLG L + P V L ++ V CG T A+ L ++
Sbjct: 246 GEVYTWGLGSMGQLGHVSLQSGDKELIPRRVVGLDGVSMKEVACGGVHTCALSLEGAL 303
Score = 240 (89.5 bits), Expect = 7.8e-17, P = 7.8e-17
Identities = 88/333 (26%), Positives = 138/333 (41%)
Query: 262 LDVQNISLG--AKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC------PKLVECLSG 313
+D+ I +G A ++ TK ++ WG + G+ G + P+L C +G
Sbjct: 1 MDIGEI-IGEVAPSVSIPTKSA-IYVWGYNQSGQTGRNEQEKLLRIPKQLPPELFGCPAG 58
Query: 314 INVQ--SVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRV 371
N + +SCG T A+ G ++ WG N +G G R H P+K+ L V
Sbjct: 59 ANSRWLDISCGREHTAAVASDGSLFAWGANEYGQLGDGTEVGRKH--PKKV-KQLQSEFV 115
Query: 372 SKVACGEWHTAIVSTSGQLF-TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
V+CG + TA ++ + T V G N+ + ++ V+CG
Sbjct: 116 KFVSCGAFCTAAIAEPRENDGTLSTSRLWVWGQNQGSNLPRLFSGAFPATTAIRQVSCGT 175
Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGH-VDGERKLLPTCVTRLVDF-D--- 485
H A+ + G L WG ++G+LG V E P + F D
Sbjct: 176 AHVVALSE-----------EGLLQAWGYNEQGQLGRGVTCEGLQAPRVINAYAKFLDEAP 224
Query: 486 ----FVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGK---LKEEFV 538
+Q SCG T L+ G+VYT G GQLG+ + ++ + L +
Sbjct: 225 ELVKIMQLSCGEYHTAALSDAGEVYTWGLGSMGQLGHVSLQSGDKELIPRRVVGLDGVSM 284
Query: 539 KGISSGSYHVAVLTSGGSVYTWGKNANGQLGLG 571
K ++ G H L+ G++Y WG GQLGLG
Sbjct: 285 KEVACGGVHTCALSLEGALYAWGGGQAGQLGLG 317
Score = 237 (88.5 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 75/262 (28%), Positives = 125/262 (47%)
Query: 316 VQSVSCGEFQTCALTKSGEIYTWGHNNHG-----ADLVGERRSRSHWLPRKLFDTL-DGV 369
++ VSCG AL++ G + WG+N G G + R K D + V
Sbjct: 168 IRQVSCGTAHVVALSEEGLLQAWGYNEQGQLGRGVTCEGLQAPRVINAYAKFLDEAPELV 227
Query: 370 RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQ---PKEVESLRGLKVKSV 426
++ +++CGE+HTA +S +G+++T+G G+ G LGH +LQ+ + P+ V L G+ +K V
Sbjct: 228 KIMQLSCGEYHTAALSDAGEVYTWGLGSMGQLGHVSLQSGDKELIPRRVVGLDGVSMKEV 287
Query: 427 ACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG---------HV-DGERKLLPT 476
ACG HT A+ ++ G L+ WG G+LG V +G LL
Sbjct: 288 ACGGVHTCAL-----------SLEGALYAWGGGQAGQLGLGPQSGFFFSVSNGSEMLLRN 336
Query: 477 CVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSI-TVVEGKLKE 535
++ D +CG T+ G++ G +GQ N K+ + V+ + +
Sbjct: 337 VPVLVIPTDVRLVACGHSHTLVYMREGRICGWGYNSYGQAANEKSSYAWYPSPVDWCVGQ 396
Query: 536 EFVKGISSGSYHVAVLTSGGSV 557
V+ +++G H AVLT S+
Sbjct: 397 --VRKLAAGGGHSAVLTDAFSL 416
Score = 230 (86.0 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 56/184 (30%), Positives = 94/184 (51%)
Query: 238 DGSVSQNKTQV-----DALLPKLLESA--VMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
DG++S ++ V + LP+L A ++ +S G H +++EG + WG +
Sbjct: 135 DGTLSTSRLWVWGQNQGSNLPRLFSGAFPATTAIRQVSCGTAHVVALSEEGLLQAWGYNE 194
Query: 291 DGRLGHKVNMD-VSCPKLVECLSG--------INVQSVSCGEFQTCALTKSGEIYTWGHN 341
G+LG V + + P+++ + + + +SCGE+ T AL+ +GE+YTWG
Sbjct: 195 QGQLGRGVTCEGLQAPRVINAYAKFLDEAPELVKIMQLSCGEYHTAALSDAGEVYTWGLG 254
Query: 342 NHGA-DLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
+ G V + +PR++ LDGV + +VACG HT +S G L+ +G G G
Sbjct: 255 SMGQLGHVSLQSGDKELIPRRVVG-LDGVSMKEVACGGVHTCALSLEGALYAWGGGQAGQ 313
Query: 401 LGHG 404
LG G
Sbjct: 314 LGLG 317
Score = 218 (81.8 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 63/226 (27%), Positives = 103/226 (45%)
Query: 224 WGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEV 283
WG G +G V Q ++A L E+ ++ + +S G H A ++ GEV
Sbjct: 190 WGYNEQG-QLGRGVTCEGLQAPRVINAYAKFLDEAPELVKIMQLSCGEYHTAALSDAGEV 248
Query: 284 FCWGEGKDGRLGHKVNMDVS----CPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
+ WG G G+LGH V++ P+ V L G++++ V+CG TCAL+ G +Y WG
Sbjct: 249 YTWGLGSMGQLGH-VSLQSGDKELIPRRVVGLDGVSMKEVACGGVHTCALSLEGALYAWG 307
Query: 340 HNNHGADLVGERR-------SRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFT 392
G +G + + S L R + + V VACG HT + G++
Sbjct: 308 GGQAGQLGLGPQSGFFFSVSNGSEMLLRNVPVLVIPTDVRLVACGHSHTLVYMREGRICG 367
Query: 393 YGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVD 438
+G ++G + P V+ G +V+ +A G H+A + D
Sbjct: 368 WGYNSYGQAANEKSSYAWYPSPVDWCVG-QVRKLAAGGGHSAVLTD 412
>TAIR|locus:2205794 [details] [associations]
symbol:AT1G27060 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 EMBL:BT030023 IPI:IPI00535833 RefSeq:NP_174026.1
UniGene:At.41142 UniGene:At.50938 ProteinModelPortal:A2RVN2
SMR:A2RVN2 DNASU:839595 EnsemblPlants:AT1G27060.1 GeneID:839595
KEGG:ath:AT1G27060 TAIR:At1g27060 HOGENOM:HOG000236375
InParanoid:A2RVN2 OMA:GYIYAWG PhylomeDB:A2RVN2
ProtClustDB:CLSN2682864 Genevestigator:A2RVN2 Uniprot:A2RVN2
Length = 386
Score = 271 (100.5 bits), Expect = 4.7e-21, P = 4.7e-21
Identities = 75/243 (30%), Positives = 117/243 (48%)
Query: 279 KEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTW 338
+E +V+ WG G DG+LG D P+L+ S ++ ++CG ALT G+++TW
Sbjct: 13 EEEQVWSWGAGTDGQLGTTKLQDELLPQLLSLTSLPSISMLACGGAHVIALTSGGKVFTW 72
Query: 339 GHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTF 398
G + G +G + LP KL D +++ A G H+ VS SG +FT G+G+F
Sbjct: 73 GRGSSGQ--LGHGDILNITLP-KLVSFFDDSVITQAAAGWSHSGFVSDSGCIFTCGNGSF 129
Query: 399 GVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
G LGHG+ ++S P +V VK VACG H+ + N + G +G
Sbjct: 130 GQLGHGDTLSLSTPAKVSHFNNDSVKMVACGMRHSLVLF-------AGNQVCG----FGS 178
Query: 459 ADKGRLGHVDGERKL--LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
+G+LG K LP V+ L D + V+ S + ++ G+ ++ G G
Sbjct: 179 GKRGQLGFSSDRIKSVNLPCVVSGLKDVEVVRISANGDHSAAISADGQFFSWG---RGFC 235
Query: 517 GNP 519
G P
Sbjct: 236 GGP 238
Score = 251 (93.4 bits), Expect = 1.6e-18, P = 1.6e-18
Identities = 100/388 (25%), Positives = 170/388 (43%)
Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
G DG + K Q D LLP+LL + + ++ G H +T G+VF WG G G+
Sbjct: 21 GAGTDGQLGTTKLQ-DELLPQLLSLTSLPSISMLACGGAHVIALTSGGKVFTWGRGSSGQ 79
Query: 294 LGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRS 353
LGH ++++ PKLV + + G + ++ SG I+T G+ + G G+ S
Sbjct: 80 LGHGDILNITLPKLVSFFDDSVITQAAAGWSHSGFVSDSGCIFTCGNGSFGQLGHGDTLS 139
Query: 354 RSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGN--LQNVSQ 411
S P K+ + V VACG H+ ++ Q+ +G G G LG + +++V+
Sbjct: 140 LS--TPAKV-SHFNNDSVKMVACGMRHSLVLFAGNQVCGFGSGKRGQLGFSSDRIKSVNL 196
Query: 412 PKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGER 471
P V L+ ++V ++ H+AAI + G+ F+WG +G G D
Sbjct: 197 PCVVSGLKDVEVVRISANGDHSAAI-----------SADGQFFSWG---RGFCGGPDVHA 242
Query: 472 -KLLPTCVT-RLVDFDFVQASC----GRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRS 525
+ LP+ ++ R V + A G + +G T L K Q+ + +A
Sbjct: 243 PQSLPSPLSFREVAVGWNHALLLTVDGEVFKLGST-LNK---QPEKQQLQIDSSEALFEK 298
Query: 526 ITVVEGKLKEEFVKGISSGSYHVAVLTSGG-SVYTWGKNANGQLG-LGDSQERETPTFVE 583
+ +G + G + AV +G + WG++ LG D E +
Sbjct: 299 VPDFDGVKVMQIAAG---AEHSAAVTENGEVKTWGWGEHGQLGLGNTNDQTSPELVSLGS 355
Query: 584 A-LRDRQVESVVCGSSITAAICLHKSIS 610
LR ++++ V CGS T A+ + +S
Sbjct: 356 IDLRTKEIK-VYCGSGFTYAVKRKQELS 382
Score = 217 (81.4 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 66/218 (30%), Positives = 98/218 (44%)
Query: 389 QLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGL-KVKSVACGPWHTAAIVDIMVDRCKSN 447
Q++++G GT G LG LQ+ P ++ SL L + +ACG H A+
Sbjct: 16 QVWSWGAGTDGQLGTTKLQDELLP-QLLSLTSLPSISMLACGGAHVIALTS--------- 65
Query: 448 AIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYT 507
GGK+FTWG G+LGH D LP V+ D QA+ G + ++ G ++T
Sbjct: 66 --GGKVFTWGRGSSGQLGHGDILNITLPKLVSFFDDSVITQAAAGWSHSGFVSDSGCIFT 123
Query: 508 MGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQ 567
G+ GQLG+ S + VK ++ G H VL +G V +G GQ
Sbjct: 124 CGNGSFGQLGHGDTLSLSTPAKVSHFNNDSVKMVACGMRHSLVLFAGNQVCGFGSGKRGQ 183
Query: 568 LGLGDSQERET--PTFVEALRDRQVESVVCGSSITAAI 603
LG + + P V L+D +V + +AAI
Sbjct: 184 LGFSSDRIKSVNLPCVVSGLKDVEVVRISANGDHSAAI 221
>UNIPROTKB|E2RSG1 [details] [associations]
symbol:ALS2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0035023 "regulation of Rho protein signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005543 "phospholipid binding" evidence=IEA]
[GO:0005089 "Rho guanyl-nucleotide exchange factor activity"
evidence=IEA] InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621
PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415
Pfam:PF02204 GO:GO:0005543 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0005622 GO:GO:0005089 Gene3D:1.20.900.10 SUPFAM:SSF48065
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023
InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493 SMART:SM00698
PROSITE:PS51205 GeneTree:ENSGT00600000084242 KO:K04575 OMA:AKPAIDF
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:AAEX03018021
RefSeq:XP_003640234.1 Ensembl:ENSCAFT00000019642 GeneID:100856109
KEGG:cfa:100856109 Uniprot:E2RSG1
Length = 1656
Score = 231 (86.4 bits), Expect = 5.2e-21, Sum P(3) = 5.2e-21
Identities = 62/182 (34%), Positives = 96/182 (52%)
Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
V +LG KH L+T++GEV+ +G R + SCP L L G V +V+ G
Sbjct: 43 VLQAALGVKHGVLLTEDGEVYSFGT-LPWR-SEPAEICPSCPILENALIGQFVVTVASGS 100
Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDT----LDGVRVSKVACGEW 379
F A+T+SG Y WG N+ G V ++ P + D+ L VR+ ++ACGE
Sbjct: 101 FHNGAVTESGVAYMWGENSAGQCAVANQQYVPEPNPVSISDSETSSLLAVRILQLACGEE 160
Query: 380 HTAIVSTSGQLFTYGDGT-FGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVD 438
HT +S S +++ +G G G++ V++P++VE L G V VACG +H+ A+V
Sbjct: 161 HTLALSISREIWAWGTGCQLGLIT--TTFPVTKPQKVEHLAGRVVLQVACGAFHSLALVQ 218
Query: 439 IM 440
+
Sbjct: 219 CL 220
Score = 148 (57.2 bits), Expect = 8.0e-06, Sum P(2) = 8.0e-06
Identities = 33/97 (34%), Positives = 50/97 (51%)
Query: 253 PKLLESAVMLDVQNISL-----GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKL 307
P+LL A + + + L G A L + EV+ WG+GK+G+LGH + P
Sbjct: 492 PRLLRKAARVKTRTVVLTPTYSGEADALLPSLRTEVWTWGKGKEGQLGHGDVLPRLQPLC 551
Query: 308 VECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHG 344
V+CL G V + G + + ALT ++Y+WG N G
Sbjct: 552 VKCLDGKEVIYLEAGGYHSLALTAKSQVYSWGSNTFG 588
Score = 120 (47.3 bits), Expect = 1.6e-06, Sum P(3) = 1.6e-06
Identities = 33/115 (28%), Positives = 57/115 (49%)
Query: 404 GNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGR 463
G L VS P+ + +K ++V P ++ D ++ ++ +++TWG +G+
Sbjct: 485 GLLSQVS-PRLLRKAARVKTRTVVLTPTYSGE-ADALLPSLRT-----EVWTWGKGKEGQ 537
Query: 464 LGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
LGH D +L P CV L + + G ++ LT +VY+ GS GQLG+
Sbjct: 538 LGHGDVLPRLQPLCVKCLDGKEVIYLEAGGYHSLALTAKSQVYSWGSNTFGQLGH 592
Score = 112 (44.5 bits), Expect = 5.2e-21, Sum P(3) = 5.2e-21
Identities = 31/97 (31%), Positives = 46/97 (47%)
Query: 504 KVYTMGSAVHGQLGN----PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYT 559
+V+T G GQLG+ P+ + + ++GK E + + +G YH LT+ VY+
Sbjct: 526 EVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGK---EVIY-LEAGGYHSLALTAKSQVYS 581
Query: 560 WGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCG 596
WG N GQLG D P + + V SV G
Sbjct: 582 WGSNTFGQLGHYDFPTT-VPRLAKVSSENGVWSVAAG 617
Score = 107 (42.7 bits), Expect = 3.5e-05, Sum P(3) = 3.5e-05
Identities = 34/105 (32%), Positives = 52/105 (49%)
Query: 377 GEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAI 436
GE + S +++T+G G G LGHG++ QP V+ L G +V + G +H+ A+
Sbjct: 514 GEADALLPSLRTEVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIYLEAGGYHSLAL 573
Query: 437 VDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRL 481
KS ++++WG G+LGH D PT V RL
Sbjct: 574 T------AKS-----QVYSWGSNTFGQLGHYD-----FPTTVPRL 602
Score = 102 (41.0 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 38/141 (26%), Positives = 60/141 (42%)
Query: 305 PKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRK--L 362
P+ + G V + G LT+ GE+Y++G + R + P L
Sbjct: 32 PERLPGWGGKTVLQAALGVKHGVLLTEDGEVYSFG-------TLPWRSEPAEICPSCPIL 84
Query: 363 FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPK-------EV 415
+ L G V VA G +H V+ SG + +G+ + G N Q V +P E
Sbjct: 85 ENALIGQFVVTVASGSFHNGAVTESGVAYMWGENSAGQCAVANQQYVPEPNPVSISDSET 144
Query: 416 ESLRGLKVKSVACGPWHTAAI 436
SL +++ +ACG HT A+
Sbjct: 145 SSLLAVRILQLACGEEHTLAL 165
Score = 84 (34.6 bits), Expect = 1.6e-06, Sum P(3) = 1.6e-06
Identities = 25/78 (32%), Positives = 42/78 (53%)
Query: 257 ESAVMLDVQNISL--GAKHAALVTKEGEVFCWGEGKDGRLGH-KVNMDVSCPKLVECLSG 313
E++ +L V+ + L G +H ++ E++ WG G +LG V+ P+ VE L+G
Sbjct: 143 ETSSLLAVRILQLACGEEHTLALSISREIWAWGTGC--QLGLITTTFPVTKPQKVEHLAG 200
Query: 314 INVQSVSCGEFQTCALTK 331
V V+CG F + AL +
Sbjct: 201 RVVLQVACGAFHSLALVQ 218
Score = 77 (32.2 bits), Expect = 2.0e-17, Sum P(3) = 2.0e-17
Identities = 18/47 (38%), Positives = 25/47 (53%)
Query: 557 VYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
V+TWGK GQLG GD R P V+ L ++V + G + A+
Sbjct: 527 VWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIYLEAGGYHSLAL 573
Score = 52 (23.4 bits), Expect = 5.2e-21, Sum P(3) = 5.2e-21
Identities = 20/71 (28%), Positives = 31/71 (43%)
Query: 613 DQSSCSQC-RMPFGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNKGKPSR--VCDTCY 669
D SSC +C + G +RK+ Y G K +T + KP R +C++
Sbjct: 869 DSSSCYECLALHLGRKRKEAE-YTLGFW--------KTFPGKMTDSLRKPERRLLCESS- 918
Query: 670 NHLQKITHSGR 680
N + H+GR
Sbjct: 919 NRALSLQHAGR 929
>UNIPROTKB|C9JW69 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0031965 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341 IPI:IPI00787306
ProteinModelPortal:C9JW69 SMR:C9JW69 STRING:C9JW69
Ensembl:ENST00000411533 ArrayExpress:C9JW69 Bgee:C9JW69
Uniprot:C9JW69
Length = 372
Score = 267 (99.0 bits), Expect = 7.0e-21, P = 7.0e-21
Identities = 105/350 (30%), Positives = 163/350 (46%)
Query: 268 SLGAKHAALVTKEGEVFCWGEGKDGRLGHKVN-MDVSCPKLVECLSGINVQSVSCGEFQT 326
S H + T+ G V G+G G+LG N M+ P LV + VQ+ G T
Sbjct: 39 SCQVSHRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDV-VQA-EAGGMHT 96
Query: 327 CALTKSGEIYTWGHNNHGADLVGERRS--RSHWLPRKLFDTLDGVRVSKVACGEWHTAIV 384
L+KSG++Y++G N+ GA +G S S +P K+ + + +V +V+ G+ HTA +
Sbjct: 97 VCLSKSGQVYSFGCNDEGA--LGRDTSVEGSEMVPGKV-ELQE--KVVQVSAGDSHTAAL 151
Query: 385 STSGQLFTYGD--GTFGVLGHGNLQNVSQ-PKEVESLRGLKVKSVACGPWHTAAIV---D 438
+ G++F +G GV+G S P +V+ + V VA G H + D
Sbjct: 152 TDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQL--DVPVVKVASGNDHLVMLTADGD 209
Query: 439 IMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCV---TR--LVDFDFVQASCGR 493
+ C G+L + R G ER L+P CV +R F A CG
Sbjct: 210 LYTLGCGEQ---GQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGA 266
Query: 494 MLTVGLTGLGKVYTMGSAVHGQLGNPKAKD----RSITVVEGKLKEEFVKGISSGSYHVA 549
T ++ G VY G + + QLG P + +++T + K +V G S G +H
Sbjct: 267 YFTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKS-WV-GFSGGQHHTV 324
Query: 550 VLTSGGSVYTWGKNANGQLGLGD-SQERETPTFVEALRDRQVESVVCGSS 598
+ S G Y+ G+ G+LGLG+ ++E+ PT + L V SV CG+S
Sbjct: 325 CMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLP--AVSSVACGAS 372
Score = 202 (76.2 bits), Expect = 6.1e-13, P = 6.1e-13
Identities = 91/330 (27%), Positives = 153/330 (46%)
Query: 239 GSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKV 298
G + + ++ P L+ ++ DV G H ++K G+V+ +G +G LG
Sbjct: 63 GQLGLGENVMERKKPALV--SIPEDVVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDT 120
Query: 299 NMDVS--CPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG--HNNHGADLVGERRSR 354
+++ S P VE + VQ VS G+ T ALT G ++ WG +N+G + E +
Sbjct: 121 SVEGSEMVPGKVELQEKV-VQ-VSAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLEPMKK 178
Query: 355 SHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGH--------GNL 406
S +P ++ LD V V KVA G H +++ G L+T G G G LG G
Sbjct: 179 S-MVPVQV--QLD-VPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGR 234
Query: 407 QNVSQ---PKEV----ESLRG-LKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
Q + + PK V RG ++ + CG + T AI S+ G ++ +G
Sbjct: 235 QGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAI---------SHE--GHVYGFGL 283
Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDF--DFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
++ +LG E +P +T + +V S G+ TV + GK Y++G A +G+L
Sbjct: 284 SNYHQLGTPGTESCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRL 343
Query: 517 G-NPKAKDRSITVVEGKLKEEFVKGISSGS 545
G A+++SI + +L V ++ G+
Sbjct: 344 GLGEGAEEKSIPTLISRLPA--VSSVACGA 371
Score = 160 (61.4 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 78/286 (27%), Positives = 119/286 (41%)
Query: 226 EGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFC 285
EG LG D +V+GS ++P +E + V +S G H A +T +G VF
Sbjct: 113 EGALGRDT--SVEGS---------EMVPGKVE--LQEKVVQVSAGDSHTAALTDDGRVFL 159
Query: 286 WGEGKD--GRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNH 343
WG +D G +G M S V+ + V V+ G LT G++YT G
Sbjct: 160 WGSFRDNNGVIGLLEPMKKSMVP-VQVQLDVPVVKVASGNDHLVMLTADGDLYTLGCGEQ 218
Query: 344 GA-----DLVGERRSRSHW----LPRKLFDTLDG----VRVSKVACGEWHTAIVSTSGQL 390
G +L R R +P+ + G VR CG + T +S G +
Sbjct: 219 GQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHV 278
Query: 391 FTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKS---VACGPWHTAAIVDIMVDRCKSN 447
+ +G + LG ++ P+ + S + KS + G HT C +
Sbjct: 279 YGFGLSNYHQLGTPGTESCFIPQNLTSFKN-STKSWVGFSGGQHHTV---------CMDS 328
Query: 448 AIGGKLFTWGDADKGRLGHVDG-ERKLLPTCVTRLVDFDFVQASCG 492
GK ++ G A+ GRLG +G E K +PT ++RL V +CG
Sbjct: 329 E--GKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPAVSSV--ACG 370
>UNIPROTKB|Q5BIW4 [details] [associations]
symbol:ALS2 "Alsin" species:9598 "Pan troglodytes"
[GO:0001662 "behavioral fear response" evidence=ISS] [GO:0001726
"ruffle" evidence=ISS] [GO:0001881 "receptor recycling"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0005769
"early endosome" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0006979 "response to oxidative stress" evidence=ISS]
[GO:0007528 "neuromuscular junction development" evidence=ISS]
[GO:0007626 "locomotory behavior" evidence=ISS] [GO:0008104
"protein localization" evidence=ISS] [GO:0014069 "postsynaptic
density" evidence=ISS] [GO:0016050 "vesicle organization"
evidence=ISS] [GO:0016197 "endosomal transport" evidence=ISS]
[GO:0017112 "Rab guanyl-nucleotide exchange factor activity"
evidence=ISS] [GO:0017137 "Rab GTPase binding" evidence=ISS]
[GO:0030027 "lamellipodium" evidence=ISS] [GO:0030425 "dendrite"
evidence=ISS] [GO:0030676 "Rac guanyl-nucleotide exchange factor
activity" evidence=ISS] [GO:0031982 "vesicle" evidence=ISS]
[GO:0032313 "regulation of Rab GTPase activity" evidence=ISS]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=ISS] [GO:0035249 "synaptic transmission, glutamatergic"
evidence=ISS] [GO:0042803 "protein homodimerization activity"
evidence=ISS] [GO:0043197 "dendritic spine" evidence=ISS]
[GO:0043234 "protein complex" evidence=ISS] [GO:0043539 "protein
serine/threonine kinase activator activity" evidence=ISS]
[GO:0045860 "positive regulation of protein kinase activity"
evidence=ISS] [GO:0048812 "neuron projection morphogenesis"
evidence=ISS] [GO:0051036 "regulation of endosome size"
evidence=ISS] [GO:0071902 "positive regulation of protein
serine/threonine kinase activity" evidence=ISS] [GO:0005813
"centrosome" evidence=ISS] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=ISS] InterPro:IPR000219
InterPro:IPR001849 Pfam:PF00621 PROSITE:PS00741 PROSITE:PS50003
PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415
Pfam:PF02204 GO:GO:0005829 GO:GO:0043234 GO:GO:0042803
GO:GO:0014069 GO:GO:0008104 GO:GO:0006979 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0007528 GO:GO:0048812
GO:GO:0007626 GO:GO:0035249 GO:GO:0043539 GO:GO:0030027
GO:GO:0016197 Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0001726 eggNOG:COG4642
InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493 SMART:SM00698
PROSITE:PS51205 CTD:57679 HOVERGEN:HBG037320 KO:K04575
OrthoDB:EOG4FTVZP GO:GO:0005769 GO:GO:0031982 GO:GO:0017137
GO:GO:0017112 GO:GO:0030676 GO:GO:0001662 GO:GO:0032855
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
HOGENOM:HOG000033908 EMBL:BK005194 RefSeq:NP_001073389.1
UniGene:Ptr.813 ProteinModelPortal:Q5BIW4 STRING:Q5BIW4
PRIDE:Q5BIW4 GeneID:470613 KEGG:ptr:470613 InParanoid:Q5BIW4
NextBio:20847741 Uniprot:Q5BIW4
Length = 1657
Score = 226 (84.6 bits), Expect = 8.7e-21, Sum P(3) = 8.7e-21
Identities = 62/182 (34%), Positives = 97/182 (53%)
Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
V +LG KH L+T++GEV+ +G R G V + S P L L G V +V+ G
Sbjct: 43 VLQAALGVKHGVLLTEDGEVYSFGT-LPWRSG-PVEICPSSPILENALVGQYVVTVATGS 100
Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDT----LDGVRVSKVACGEW 379
F + A+T +G Y WG N+ G V ++ P + D+ L VR+ ++ACGE
Sbjct: 101 FHSGAVTDNGVAYMWGENSAGQCAVANQQYVPEPNPVSIADSEASPLLAVRILQLACGEE 160
Query: 380 HTAIVSTSGQLFTYGDGT-FGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVD 438
HT +S S +++ +G G G++ V++P++VE L G V VACG +H+ A+V
Sbjct: 161 HTLALSISREIWAWGTGCQLGLIT--TAFPVTKPQKVEHLAGRVVLQVACGAFHSLALVQ 218
Query: 439 IM 440
+
Sbjct: 219 CL 220
Score = 149 (57.5 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 33/97 (34%), Positives = 50/97 (51%)
Query: 253 PKLLESAVMLDVQNISL-----GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKL 307
P+LL A + + + L G A L + EV+ WG+GK+G+LGH + P
Sbjct: 493 PRLLRKAARVKTRTVVLTPTYSGEADALLPSLRTEVWTWGKGKEGQLGHGDVLPRLQPLC 552
Query: 308 VECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHG 344
V+CL G V + G + + ALT ++Y+WG N G
Sbjct: 553 VKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGSNTFG 589
Score = 121 (47.7 bits), Expect = 5.1e-10, Sum P(3) = 5.1e-10
Identities = 33/115 (28%), Positives = 57/115 (49%)
Query: 404 GNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGR 463
G L VS P+ + +K ++V P ++ D ++ ++ +++TWG +G+
Sbjct: 486 GLLSQVS-PRLLRKAARVKTRTVVLTPTYSGE-ADALLPSLRT-----EVWTWGKGKEGQ 538
Query: 464 LGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
LGH D +L P CV L + + G ++ LT +VY+ GS GQLG+
Sbjct: 539 LGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGSNTFGQLGH 593
Score = 118 (46.6 bits), Expect = 5.1e-10, Sum P(3) = 5.1e-10
Identities = 42/139 (30%), Positives = 66/139 (47%)
Query: 255 LLESAVMLD-VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVEC--- 310
+LE+A++ V ++ G+ H+ VT G + WGE G+ V P V
Sbjct: 83 ILENALVGQYVVTVATGSFHSGAVTDNGVAYMWGENSAGQCAVANQQYVPEPNPVSIADS 142
Query: 311 ----LSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTL 366
L + + ++CGE T AL+ S EI+ WG G L + P+K+ + L
Sbjct: 143 EASPLLAVRILQLACGEEHTLALSISREIWAWGT---GCQLGLITTAFPVTKPQKV-EHL 198
Query: 367 DGVRVSKVACGEWHT-AIV 384
G V +VACG +H+ A+V
Sbjct: 199 AGRVVLQVACGAFHSLALV 217
Score = 115 (45.5 bits), Expect = 8.7e-21, Sum P(3) = 8.7e-21
Identities = 31/97 (31%), Positives = 46/97 (47%)
Query: 504 KVYTMGSAVHGQLGN----PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYT 559
+V+T G GQLG+ P+ + + ++GK E + + +G YH LT+ VY+
Sbjct: 527 EVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGK---EVIH-LEAGGYHSLALTAKSQVYS 582
Query: 560 WGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCG 596
WG N GQLG D P + + V SV G
Sbjct: 583 WGSNTFGQLGHSDFPTT-VPRLAKISSENGVWSVAAG 618
Score = 107 (42.7 bits), Expect = 1.3e-08, Sum P(3) = 1.3e-08
Identities = 34/105 (32%), Positives = 52/105 (49%)
Query: 377 GEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAI 436
GE + S +++T+G G G LGHG++ QP V+ L G +V + G +H+ A+
Sbjct: 515 GEADALLPSLRTEVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLAL 574
Query: 437 VDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRL 481
KS ++++WG G+LGH D PT V RL
Sbjct: 575 T------AKS-----QVYSWGSNTFGQLGHSD-----FPTTVPRL 603
Score = 96 (38.9 bits), Expect = 3.4e-07, Sum P(3) = 3.4e-07
Identities = 36/141 (25%), Positives = 59/141 (41%)
Query: 305 PKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRK--L 362
P+ + G V + G LT+ GE+Y++G + R P L
Sbjct: 32 PERLPGWGGKTVLQAALGVKHGVLLTEDGEVYSFG-------TLPWRSGPVEICPSSPIL 84
Query: 363 FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPK-------EV 415
+ L G V VA G +H+ V+ +G + +G+ + G N Q V +P E
Sbjct: 85 ENALVGQYVVTVATGSFHSGAVTDNGVAYMWGENSAGQCAVANQQYVPEPNPVSIADSEA 144
Query: 416 ESLRGLKVKSVACGPWHTAAI 436
L +++ +ACG HT A+
Sbjct: 145 SPLLAVRILQLACGEEHTLAL 165
Score = 78 (32.5 bits), Expect = 5.4e-17, Sum P(3) = 5.4e-17
Identities = 18/47 (38%), Positives = 25/47 (53%)
Query: 557 VYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
V+TWGK GQLG GD R P V+ L ++V + G + A+
Sbjct: 528 VWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLAL 574
Score = 52 (23.4 bits), Expect = 8.7e-21, Sum P(3) = 8.7e-21
Identities = 20/71 (28%), Positives = 31/71 (43%)
Query: 613 DQSSCSQC-RMPFGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNKGKPSR--VCDTCY 669
D SSC +C + G +RK+ Y G K +T + KP R +C++
Sbjct: 870 DSSSCYECLALHLGRKRKEAE-YTLGFW--------KTFPGKMTDSLRKPERRLLCESS- 919
Query: 670 NHLQKITHSGR 680
N + H+GR
Sbjct: 920 NRALSLQHAGR 930
Score = 41 (19.5 bits), Expect = 3.2e-13, Sum P(3) = 3.2e-13
Identities = 11/34 (32%), Positives = 20/34 (58%)
Query: 561 GKNANGQLGLGDSQERETPTFVEALRDRQVESVV 594
G +A G GL DS+E + E+++ ++ S+V
Sbjct: 437 GSSAIGPEGLKDSREEQVKQ--ESMQGKKSSSLV 468
>WB|WBGene00021685 [details] [associations]
symbol:herc-1 species:6239 "Caenorhabditis elegans"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0006464 "cellular
protein modification process" evidence=IEA] [GO:0019915 "lipid
storage" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
GO:GO:0000003 GO:GO:0019915 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00660000095216 HOGENOM:HOG000208452 EMBL:FO081800
HSSP:Q05086 RefSeq:NP_490834.1 ProteinModelPortal:Q9BL11 SMR:Q9BL11
STRING:Q9BL11 PaxDb:Q9BL11 EnsemblMetazoa:Y48G8AL.1.1
EnsemblMetazoa:Y48G8AL.1.2 GeneID:171700 KEGG:cel:CELE_Y48G8AL.1
UCSC:Y48G8AL.1 CTD:171700 WormBase:Y48G8AL.1 InParanoid:Q9BL11
OMA:PRELMEL NextBio:872357 Uniprot:Q9BL11
Length = 1019
Score = 268 (99.4 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 90/329 (27%), Positives = 151/329 (45%)
Query: 233 IGGAVDGSVSQ-NKTQVD-ALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
+G +DG + + ++T+ ++ P S+ + +Q IS G H VT +G VF WG +
Sbjct: 65 VGSNMDGQLGRGSRTEGSFSIYPVSWTSSAKI-IQ-ISAGRSHTVSVTDDGRVFAWGSNE 122
Query: 291 DGRLGHKVNMD-VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVG 349
G+LG + P+ V+ ++ I VQ V+ G AL + G ++ WG G +
Sbjct: 123 HGQLGMESKFTWQGTPRRVQEINDI-VQ-VASGSNHCIALDEGGRVFVWGEQADGRCI-- 178
Query: 350 ERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV 409
H P + + L GV + +V G H +S SG +FT+G G LG +L+
Sbjct: 179 ------H-RPEPV-EQLSGVPIVRVLAGARHCLALSASGAVFTWGQNNSGELGIDDLRPQ 230
Query: 410 SQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDG 469
+ + V + GL V ACG HT +++ C G+ F++G G+ G
Sbjct: 231 TSVQHVHQMDGLGVVEAACGDNHT-----VLLTHC------GRTFSFGSDALGQCGFGKK 279
Query: 470 -ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITV 528
E++ PT V+ L+ + + G T+ + G Y G GQLGN K +S
Sbjct: 280 VEKRTNPTAVSDLIGSHVTRIAAGACHTIAICK-GAPYPFGLNSSGQLGNGKIMTQSTPR 338
Query: 529 VEGKLKEEFVKGISSGSYHVAVLTSGGSV 557
+L + V G+ +G + + S G++
Sbjct: 339 KTDEL--DHVTGVFAGYHQTFFVRSSGTI 365
Score = 175 (66.7 bits), Expect = 9.7e-21, Sum P(3) = 9.7e-21
Identities = 52/178 (29%), Positives = 80/178 (44%)
Query: 409 VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD 468
+ +P+ VE L G+ + V G H C + + G +FTWG + G LG D
Sbjct: 178 IHRPEPVEQLSGVPIVRVLAGARH-----------CLALSASGAVFTWGQNNSGELGIDD 226
Query: 469 GERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG-NPKAKDRSIT 527
+ V ++ V+A+CG TV LT G+ ++ GS GQ G K + R+
Sbjct: 227 LRPQTSVQHVHQMDGLGVVEAACGDNHTVLLTHCGRTFSFGSDALGQCGFGKKVEKRTNP 286
Query: 528 VVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEAL 585
L V I++G+ H + G Y +G N++GQLG G + TP + L
Sbjct: 287 TAVSDLIGSHVTRIAAGACHTIAICKGAP-YPFGLNSSGQLGNGKIMTQSTPRKTDEL 343
Score = 174 (66.3 bits), Expect = 9.7e-21, Sum P(3) = 9.7e-21
Identities = 48/176 (27%), Positives = 82/176 (46%)
Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKL-VECLSGINVQSVSCG 322
V +++ G +H +TK+G+++ G DG+LG + S V S + +S G
Sbjct: 43 VTSVTCGEQHTVFLTKDGKMWSVGSNMDGQLGRGSRTEGSFSIYPVSWTSSAKIIQISAG 102
Query: 323 EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHW--LPRKLFDTLDGVRVSKVACGEWH 380
T ++T G ++ WG N HG +G S+ W PR++ + D + +VA G H
Sbjct: 103 RSHTVSVTDDGRVFAWGSNEHGQ--LG-MESKFTWQGTPRRVQEIND---IVQVASGSNH 156
Query: 381 TAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAI 436
+ G++F +G+ G H +P+ VE L G+ + V G H A+
Sbjct: 157 CIALDEGGRVFVWGEQADGRCIH-------RPEPVEQLSGVPIVRVLAGARHCLAL 205
Score = 153 (58.9 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 61/237 (25%), Positives = 108/237 (45%)
Query: 404 GNLQNVSQPKEVESLRGLKVK-SVACGP--WHTAA-IVDIMVDRCKSNAI--GGKLFTWG 457
G + +V + + RG + + S + P W ++A I+ I R + ++ G++F WG
Sbjct: 60 GKMWSVGSNMDGQLGRGSRTEGSFSIYPVSWTSSAKIIQISAGRSHTVSVTDDGRVFAWG 119
Query: 458 DADKGRLGHVDGERKLLPTCVTRLVDF--DFVQASCGRMLTVGLTGLGKVYTMGSAVHGQ 515
+ G+LG E K R V D VQ + G + L G+V+ G G+
Sbjct: 120 SNEHGQLGM---ESKFTWQGTPRRVQEINDIVQVASGSNHCIALDEGGRVFVWGEQADGR 176
Query: 516 -LGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQ 574
+ P+ VE +L + + +G+ H L++ G+V+TWG+N +G+LG+ D +
Sbjct: 177 CIHRPEP-------VE-QLSGVPIVRVLAGARHCLALSASGAVFTWGQNNSGELGIDDLR 228
Query: 575 ERETPTFVEALRDRQVESVVCGSSITAAICLH--KSISVGDQSSCSQCRMPFGFRRK 629
+ + V + V CG + T + H ++ S G + QC GF +K
Sbjct: 229 PQTSVQHVHQMDGLGVVEAACGDNHTVLLT-HCGRTFSFGSDA-LGQC----GFGKK 279
Score = 152 (58.6 bits), Expect = 2.6e-15, Sum P(3) = 2.6e-15
Identities = 48/168 (28%), Positives = 71/168 (42%)
Query: 450 GGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMG 509
GG++F WG+ GR H P V +L V+ G + L+ G V+T G
Sbjct: 163 GGRVFVWGEQADGRCIH-------RPEPVEQLSGVPIVRVLAGARHCLALSASGAVFTWG 215
Query: 510 SAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLG 569
G+LG + ++ ++ V + G H +LT G +++G +A GQ G
Sbjct: 216 QNNSGELGIDDLRPQTSVQHVHQMDGLGVVEAACGDNHTVLLTHCGRTFSFGSDALGQCG 275
Query: 570 LGDSQERET-PTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSS 616
G E+ T PT V L V + G+ T AIC G SS
Sbjct: 276 FGKKVEKRTNPTAVSDLIGSHVTRIAAGACHTIAICKGAPYPFGLNSS 323
Score = 147 (56.8 bits), Expect = 9.0e-05, Sum P(2) = 9.0e-05
Identities = 52/189 (27%), Positives = 81/189 (42%)
Query: 334 EIYTWGHNNHGADLVGERRSRSH-WLPRKLF---DTLDGVRVSKVACGEWHTAIVSTSGQ 389
E+ GH G +G R S S +P ++ + +DG V+ V CGE HT ++ G+
Sbjct: 4 ELLGCGHTGEGQ--LGVRLSESTIQVPERIIGAPNDMDGTAVTSVTCGEQHTVFLTKDGK 61
Query: 390 LFTYGDGTFGVLGHGNLQNVS-QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNA 448
+++ G G LG G+ S V K+ ++ G HT ++ D D
Sbjct: 62 MWSVGSNMDGQLGRGSRTEGSFSIYPVSWTSSAKIIQISAGRSHTVSVTD---D------ 112
Query: 449 IGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDF--DFVQASCGRMLTVGLTGLGKVY 506
G++F WG + G+LG E K R V D VQ + G + L G+V+
Sbjct: 113 --GRVFAWGSNEHGQLGM---ESKFTWQGTPRRVQEINDIVQVASGSNHCIALDEGGRVF 167
Query: 507 TMGSAVHGQ 515
G G+
Sbjct: 168 VWGEQADGR 176
Score = 146 (56.5 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 40/134 (29%), Positives = 67/134 (50%)
Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITV--VEGKLKEEFVKGISSGSYH 547
+CG TV LT GK++++GS + GQLG + S ++ V + ++ IS+G H
Sbjct: 47 TCGEQHTVFLTKDGKMWSVGSNMDGQLGRGSRTEGSFSIYPVSWTSSAKIIQ-ISAGRSH 105
Query: 548 VAVLTSGGSVYTWGKNANGQLGLGDSQERE-TPTFVEALRDRQVESVVCGSSITAAICLH 606
+T G V+ WG N +GQLG+ + TP V+ + D + V GS+ A+
Sbjct: 106 TVSVTDDGRVFAWGSNEHGQLGMESKFTWQGTPRRVQEIND--IVQVASGSNHCIALDEG 163
Query: 607 KSISVGDQSSCSQC 620
+ V + + +C
Sbjct: 164 GRVFVWGEQADGRC 177
Score = 145 (56.1 bits), Expect = 2.6e-15, Sum P(3) = 2.6e-15
Identities = 49/191 (25%), Positives = 85/191 (44%)
Query: 282 EVFCWGEGKDGRLGHKVNMD-VSCPKLV----ECLSGINVQSVSCGEFQTCALTKSGEIY 336
E+ G +G+LG +++ + P+ + + G V SV+CGE T LTK G+++
Sbjct: 4 ELLGCGHTGEGQLGVRLSESTIQVPERIIGAPNDMDGTAVTSVTCGEQHTVFLTKDGKMW 63
Query: 337 TWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG 396
+ G N G G R S + + + ++ +++ G HT V+ G++F +G
Sbjct: 64 SVGSNMDGQLGRGSRTEGSFSIYPVSWTS--SAKIIQISAGRSHTVSVTDDGRVFAWGSN 121
Query: 397 TFGVLG-HGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFT 455
G LG P+ V+ + + VA G H A+ + GG++F
Sbjct: 122 EHGQLGMESKFTWQGTPRRVQEIND--IVQVASGSNHCIALDE-----------GGRVFV 168
Query: 456 WGDADKGRLGH 466
WG+ GR H
Sbjct: 169 WGEQADGRCIH 179
Score = 38 (18.4 bits), Expect = 9.7e-21, Sum P(3) = 9.7e-21
Identities = 10/37 (27%), Positives = 19/37 (51%)
Query: 650 INASLTPNKGKPSRVCDTCYN--HLQKITHSGRLLKQ 684
++A++ P+ + V TC+N L I LL++
Sbjct: 969 LHAAIQPSAPESLPVAHTCFNLLDLPNIADDVELLRR 1005
>UNIPROTKB|Q9BL11 [details] [associations]
symbol:herc-1 "Protein HERC-1" species:6239 "Caenorhabditis
elegans" [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
[GO:0005737 "cytoplasm" evidence=IBA] [GO:0005634 "nucleus"
evidence=IBA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0000003 GO:GO:0019915 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 GeneTree:ENSGT00660000095216 HOGENOM:HOG000208452
EMBL:FO081800 HSSP:Q05086 RefSeq:NP_490834.1
ProteinModelPortal:Q9BL11 SMR:Q9BL11 STRING:Q9BL11 PaxDb:Q9BL11
EnsemblMetazoa:Y48G8AL.1.1 EnsemblMetazoa:Y48G8AL.1.2 GeneID:171700
KEGG:cel:CELE_Y48G8AL.1 UCSC:Y48G8AL.1 CTD:171700
WormBase:Y48G8AL.1 InParanoid:Q9BL11 OMA:PRELMEL NextBio:872357
Uniprot:Q9BL11
Length = 1019
Score = 268 (99.4 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 90/329 (27%), Positives = 151/329 (45%)
Query: 233 IGGAVDGSVSQ-NKTQVD-ALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
+G +DG + + ++T+ ++ P S+ + +Q IS G H VT +G VF WG +
Sbjct: 65 VGSNMDGQLGRGSRTEGSFSIYPVSWTSSAKI-IQ-ISAGRSHTVSVTDDGRVFAWGSNE 122
Query: 291 DGRLGHKVNMD-VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVG 349
G+LG + P+ V+ ++ I VQ V+ G AL + G ++ WG G +
Sbjct: 123 HGQLGMESKFTWQGTPRRVQEINDI-VQ-VASGSNHCIALDEGGRVFVWGEQADGRCI-- 178
Query: 350 ERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV 409
H P + + L GV + +V G H +S SG +FT+G G LG +L+
Sbjct: 179 ------H-RPEPV-EQLSGVPIVRVLAGARHCLALSASGAVFTWGQNNSGELGIDDLRPQ 230
Query: 410 SQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDG 469
+ + V + GL V ACG HT +++ C G+ F++G G+ G
Sbjct: 231 TSVQHVHQMDGLGVVEAACGDNHT-----VLLTHC------GRTFSFGSDALGQCGFGKK 279
Query: 470 -ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITV 528
E++ PT V+ L+ + + G T+ + G Y G GQLGN K +S
Sbjct: 280 VEKRTNPTAVSDLIGSHVTRIAAGACHTIAICK-GAPYPFGLNSSGQLGNGKIMTQSTPR 338
Query: 529 VEGKLKEEFVKGISSGSYHVAVLTSGGSV 557
+L + V G+ +G + + S G++
Sbjct: 339 KTDEL--DHVTGVFAGYHQTFFVRSSGTI 365
Score = 175 (66.7 bits), Expect = 9.7e-21, Sum P(3) = 9.7e-21
Identities = 52/178 (29%), Positives = 80/178 (44%)
Query: 409 VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD 468
+ +P+ VE L G+ + V G H C + + G +FTWG + G LG D
Sbjct: 178 IHRPEPVEQLSGVPIVRVLAGARH-----------CLALSASGAVFTWGQNNSGELGIDD 226
Query: 469 GERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG-NPKAKDRSIT 527
+ V ++ V+A+CG TV LT G+ ++ GS GQ G K + R+
Sbjct: 227 LRPQTSVQHVHQMDGLGVVEAACGDNHTVLLTHCGRTFSFGSDALGQCGFGKKVEKRTNP 286
Query: 528 VVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEAL 585
L V I++G+ H + G Y +G N++GQLG G + TP + L
Sbjct: 287 TAVSDLIGSHVTRIAAGACHTIAICKGAP-YPFGLNSSGQLGNGKIMTQSTPRKTDEL 343
Score = 174 (66.3 bits), Expect = 9.7e-21, Sum P(3) = 9.7e-21
Identities = 48/176 (27%), Positives = 82/176 (46%)
Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKL-VECLSGINVQSVSCG 322
V +++ G +H +TK+G+++ G DG+LG + S V S + +S G
Sbjct: 43 VTSVTCGEQHTVFLTKDGKMWSVGSNMDGQLGRGSRTEGSFSIYPVSWTSSAKIIQISAG 102
Query: 323 EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHW--LPRKLFDTLDGVRVSKVACGEWH 380
T ++T G ++ WG N HG +G S+ W PR++ + D + +VA G H
Sbjct: 103 RSHTVSVTDDGRVFAWGSNEHGQ--LG-MESKFTWQGTPRRVQEIND---IVQVASGSNH 156
Query: 381 TAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAI 436
+ G++F +G+ G H +P+ VE L G+ + V G H A+
Sbjct: 157 CIALDEGGRVFVWGEQADGRCIH-------RPEPVEQLSGVPIVRVLAGARHCLAL 205
Score = 153 (58.9 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 61/237 (25%), Positives = 108/237 (45%)
Query: 404 GNLQNVSQPKEVESLRGLKVK-SVACGP--WHTAA-IVDIMVDRCKSNAI--GGKLFTWG 457
G + +V + + RG + + S + P W ++A I+ I R + ++ G++F WG
Sbjct: 60 GKMWSVGSNMDGQLGRGSRTEGSFSIYPVSWTSSAKIIQISAGRSHTVSVTDDGRVFAWG 119
Query: 458 DADKGRLGHVDGERKLLPTCVTRLVDF--DFVQASCGRMLTVGLTGLGKVYTMGSAVHGQ 515
+ G+LG E K R V D VQ + G + L G+V+ G G+
Sbjct: 120 SNEHGQLGM---ESKFTWQGTPRRVQEINDIVQVASGSNHCIALDEGGRVFVWGEQADGR 176
Query: 516 -LGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQ 574
+ P+ VE +L + + +G+ H L++ G+V+TWG+N +G+LG+ D +
Sbjct: 177 CIHRPEP-------VE-QLSGVPIVRVLAGARHCLALSASGAVFTWGQNNSGELGIDDLR 228
Query: 575 ERETPTFVEALRDRQVESVVCGSSITAAICLH--KSISVGDQSSCSQCRMPFGFRRK 629
+ + V + V CG + T + H ++ S G + QC GF +K
Sbjct: 229 PQTSVQHVHQMDGLGVVEAACGDNHTVLLT-HCGRTFSFGSDA-LGQC----GFGKK 279
Score = 152 (58.6 bits), Expect = 2.6e-15, Sum P(3) = 2.6e-15
Identities = 48/168 (28%), Positives = 71/168 (42%)
Query: 450 GGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMG 509
GG++F WG+ GR H P V +L V+ G + L+ G V+T G
Sbjct: 163 GGRVFVWGEQADGRCIH-------RPEPVEQLSGVPIVRVLAGARHCLALSASGAVFTWG 215
Query: 510 SAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLG 569
G+LG + ++ ++ V + G H +LT G +++G +A GQ G
Sbjct: 216 QNNSGELGIDDLRPQTSVQHVHQMDGLGVVEAACGDNHTVLLTHCGRTFSFGSDALGQCG 275
Query: 570 LGDSQERET-PTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSS 616
G E+ T PT V L V + G+ T AIC G SS
Sbjct: 276 FGKKVEKRTNPTAVSDLIGSHVTRIAAGACHTIAICKGAPYPFGLNSS 323
Score = 147 (56.8 bits), Expect = 9.0e-05, Sum P(2) = 9.0e-05
Identities = 52/189 (27%), Positives = 81/189 (42%)
Query: 334 EIYTWGHNNHGADLVGERRSRSH-WLPRKLF---DTLDGVRVSKVACGEWHTAIVSTSGQ 389
E+ GH G +G R S S +P ++ + +DG V+ V CGE HT ++ G+
Sbjct: 4 ELLGCGHTGEGQ--LGVRLSESTIQVPERIIGAPNDMDGTAVTSVTCGEQHTVFLTKDGK 61
Query: 390 LFTYGDGTFGVLGHGNLQNVS-QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNA 448
+++ G G LG G+ S V K+ ++ G HT ++ D D
Sbjct: 62 MWSVGSNMDGQLGRGSRTEGSFSIYPVSWTSSAKIIQISAGRSHTVSVTD---D------ 112
Query: 449 IGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDF--DFVQASCGRMLTVGLTGLGKVY 506
G++F WG + G+LG E K R V D VQ + G + L G+V+
Sbjct: 113 --GRVFAWGSNEHGQLGM---ESKFTWQGTPRRVQEINDIVQVASGSNHCIALDEGGRVF 167
Query: 507 TMGSAVHGQ 515
G G+
Sbjct: 168 VWGEQADGR 176
Score = 146 (56.5 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 40/134 (29%), Positives = 67/134 (50%)
Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITV--VEGKLKEEFVKGISSGSYH 547
+CG TV LT GK++++GS + GQLG + S ++ V + ++ IS+G H
Sbjct: 47 TCGEQHTVFLTKDGKMWSVGSNMDGQLGRGSRTEGSFSIYPVSWTSSAKIIQ-ISAGRSH 105
Query: 548 VAVLTSGGSVYTWGKNANGQLGLGDSQERE-TPTFVEALRDRQVESVVCGSSITAAICLH 606
+T G V+ WG N +GQLG+ + TP V+ + D + V GS+ A+
Sbjct: 106 TVSVTDDGRVFAWGSNEHGQLGMESKFTWQGTPRRVQEIND--IVQVASGSNHCIALDEG 163
Query: 607 KSISVGDQSSCSQC 620
+ V + + +C
Sbjct: 164 GRVFVWGEQADGRC 177
Score = 145 (56.1 bits), Expect = 2.6e-15, Sum P(3) = 2.6e-15
Identities = 49/191 (25%), Positives = 85/191 (44%)
Query: 282 EVFCWGEGKDGRLGHKVNMD-VSCPKLV----ECLSGINVQSVSCGEFQTCALTKSGEIY 336
E+ G +G+LG +++ + P+ + + G V SV+CGE T LTK G+++
Sbjct: 4 ELLGCGHTGEGQLGVRLSESTIQVPERIIGAPNDMDGTAVTSVTCGEQHTVFLTKDGKMW 63
Query: 337 TWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG 396
+ G N G G R S + + + ++ +++ G HT V+ G++F +G
Sbjct: 64 SVGSNMDGQLGRGSRTEGSFSIYPVSWTS--SAKIIQISAGRSHTVSVTDDGRVFAWGSN 121
Query: 397 TFGVLG-HGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFT 455
G LG P+ V+ + + VA G H A+ + GG++F
Sbjct: 122 EHGQLGMESKFTWQGTPRRVQEIND--IVQVASGSNHCIALDE-----------GGRVFV 168
Query: 456 WGDADKGRLGH 466
WG+ GR H
Sbjct: 169 WGEQADGRCIH 179
Score = 38 (18.4 bits), Expect = 9.7e-21, Sum P(3) = 9.7e-21
Identities = 10/37 (27%), Positives = 19/37 (51%)
Query: 650 INASLTPNKGKPSRVCDTCYN--HLQKITHSGRLLKQ 684
++A++ P+ + V TC+N L I LL++
Sbjct: 969 LHAAIQPSAPESLPVAHTCFNLLDLPNIADDVELLRR 1005
>UNIPROTKB|F1SI31 [details] [associations]
symbol:ALS2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051036 "regulation of endosome size" evidence=IEA]
[GO:0048812 "neuron projection morphogenesis" evidence=IEA]
[GO:0043539 "protein serine/threonine kinase activator activity"
evidence=IEA] [GO:0043234 "protein complex" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=IEA] [GO:0032313 "regulation of Rab GTPase activity"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0030676 "Rac
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0030027 "lamellipodium" evidence=IEA] [GO:0017137 "Rab GTPase
binding" evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange
factor activity" evidence=IEA] [GO:0016197 "endosomal transport"
evidence=IEA] [GO:0016050 "vesicle organization" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0008104
"protein localization" evidence=IEA] [GO:0007626 "locomotory
behavior" evidence=IEA] [GO:0007528 "neuromuscular junction
development" evidence=IEA] [GO:0006979 "response to oxidative
stress" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005769 "early endosome"
evidence=IEA] [GO:0001881 "receptor recycling" evidence=IEA]
[GO:0001726 "ruffle" evidence=IEA] [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0005543 "phospholipid binding"
evidence=IEA] InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621
PROSITE:PS50003 PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408
Pfam:PF00415 Pfam:PF02204 GO:GO:0005829 GO:GO:0005813 GO:GO:0043234
GO:GO:0014069 GO:GO:0008104 GO:GO:0006979 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0007528 GO:GO:0048812
GO:GO:0007626 GO:GO:0035249 GO:GO:0043539 GO:GO:0016197
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 InterPro:IPR003409
InterPro:IPR003123 Pfam:PF02493 SMART:SM00698 PROSITE:PS51205
GeneTree:ENSGT00600000084242 OMA:AKPAIDF GO:GO:0005769
GO:GO:0017112 GO:GO:0030676 GO:GO:0001662 GO:GO:0032855
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
Ensembl:ENSSSCT00000017539 Uniprot:F1SI31
Length = 1644
Score = 229 (85.7 bits), Expect = 9.9e-21, Sum P(2) = 9.9e-21
Identities = 63/196 (32%), Positives = 102/196 (52%)
Query: 250 ALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVE 309
++ P+ L V +LG KH L+T++GEV+ +G R + S P L
Sbjct: 29 SVTPERLPGWTGKTVLQAALGVKHGVLLTEDGEVYSFGT-LPWR-SEPAELCPSSPILEN 86
Query: 310 CLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDT---- 365
L G V +V+ G F + A+T+SG +Y WG N+ G V ++ P + D+
Sbjct: 87 ALVGQYVVTVATGSFHSGAVTESGVVYMWGENSAGQCAVANQQYVPEPNPVSISDSETSP 146
Query: 366 LDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT-FGVLGHGNLQNVSQPKEVESLRGLKVK 424
L VR+ ++ACGE HT +S S +++ +G G G++ V++P++VE L G V
Sbjct: 147 LLAVRILQLACGEEHTLALSISREIWAWGTGCQLGLIT--TTFPVTKPQKVEHLAGRVVL 204
Query: 425 SVACGPWHTAAIVDIM 440
VACG +H+ A+V +
Sbjct: 205 QVACGAFHSLALVQCL 220
Score = 152 (58.6 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 34/97 (35%), Positives = 50/97 (51%)
Query: 253 PKLLESAVMLDVQNISL-----GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKL 307
P+LL A + + + L G A L + EV+ WG+GKDG+LGH + P
Sbjct: 487 PRLLRRAARVKTRTVVLTPTYSGEADALLPSLRTEVWTWGKGKDGQLGHGDVLPRLQPLC 546
Query: 308 VECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHG 344
V+CL G V + G + + ALT ++Y+WG N G
Sbjct: 547 VKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGSNTFG 583
Score = 113 (44.8 bits), Expect = 9.9e-21, Sum P(2) = 9.9e-21
Identities = 31/97 (31%), Positives = 46/97 (47%)
Query: 504 KVYTMGSAVHGQLGN----PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYT 559
+V+T G GQLG+ P+ + + ++GK E + + +G YH LT+ VY+
Sbjct: 521 EVWTWGKGKDGQLGHGDVLPRLQPLCVKCLDGK---EVIH-LEAGGYHSLALTAKSQVYS 576
Query: 560 WGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCG 596
WG N GQLG D P + + V SV G
Sbjct: 577 WGSNTFGQLGHSDFPTT-VPRLAKMNSENGVWSVAAG 612
Score = 79 (32.9 bits), Expect = 3.4e-17, Sum P(2) = 3.4e-17
Identities = 18/47 (38%), Positives = 26/47 (55%)
Query: 557 VYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
V+TWGK +GQLG GD R P V+ L ++V + G + A+
Sbjct: 522 VWTWGKGKDGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLAL 568
Score = 39 (18.8 bits), Expect = 4.9e-13, Sum P(2) = 4.9e-13
Identities = 10/34 (29%), Positives = 20/34 (58%)
Query: 561 GKNANGQLGLGDSQERETPTFVEALRDRQVESVV 594
G ++ G GL DS+E + E+++ ++ S+V
Sbjct: 431 GSSSMGPEGLKDSREEQVKQ--ESMQGKKSSSLV 462
>UNIPROTKB|P18754 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=IDA]
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0007088
"regulation of mitosis" evidence=IDA] [GO:0000082 "G1/S transition
of mitotic cell cycle" evidence=IMP] [GO:0007090 "regulation of S
phase of mitotic cell cycle" evidence=IMP] [GO:0042393 "histone
binding" evidence=IDA] [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0000794 "condensed nuclear chromosome" evidence=IDA]
[GO:0007052 "mitotic spindle organization" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0031492 "nucleosomal DNA binding" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0007059
"chromosome segregation" evidence=IMP] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0016032 "viral reproduction" evidence=TAS]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 Reactome:REACT_116125 GO:GO:0007088 GO:GO:0007059
GO:GO:0005654 GO:GO:0016032 GO:GO:0051301 GO:GO:0007067
GO:GO:0007052 GO:GO:0051225 GO:GO:0000082 GO:GO:0031965
GO:GO:0000790 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0000794 GO:GO:0042393 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GO:GO:0007090 GO:GO:0031492 PDB:1I2M PDBsum:1I2M KO:K11493
EMBL:X12654 EMBL:X06130 EMBL:D00591 EMBL:AF498924 EMBL:BC007300
EMBL:BC010067 EMBL:BC036903 EMBL:BC069198 EMBL:S75708
IPI:IPI00001661 IPI:IPI00747309 PIR:A26691 RefSeq:NP_001041659.1
RefSeq:NP_001041660.1 RefSeq:NP_001041664.1 RefSeq:NP_001260.1
UniGene:Hs.469723 PDB:1A12 PDBsum:1A12 ProteinModelPortal:P18754
SMR:P18754 DIP:DIP-35416N IntAct:P18754 MINT:MINT-240062
STRING:P18754 PhosphoSite:P18754 DMDM:132170 PaxDb:P18754
PRIDE:P18754 DNASU:1104 Ensembl:ENST00000373831
Ensembl:ENST00000373832 Ensembl:ENST00000373833
Ensembl:ENST00000398958 GeneID:1104 KEGG:hsa:1104 UCSC:uc001bqa.2
UCSC:uc001bqf.2 CTD:1104 GeneCards:GC01P028834 HGNC:HGNC:1913
HPA:CAB015413 HPA:HPA027573 HPA:HPA027574 MIM:179710
neXtProt:NX_P18754 PharmGKB:PA26449 HOGENOM:HOG000234341
HOVERGEN:HBG017712 OMA:RETTEEG PhylomeDB:P18754
EvolutionaryTrace:P18754 GenomeRNAi:1104 NextBio:4572
ArrayExpress:P18754 Bgee:P18754 CleanEx:HS_RCC1
Genevestigator:P18754 GermOnline:ENSG00000180198 Uniprot:P18754
Length = 421
Score = 272 (100.8 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 105/350 (30%), Positives = 165/350 (47%)
Query: 273 HAALVTKEGEVFCWGEGKDGRLGHKVN-MDVSCPKLVECLSGINVQSVSCGEFQTCALTK 331
H + T+ G V G+G G+LG N M+ P LV + VQ+ G T L+K
Sbjct: 27 HRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDV-VQA-EAGGMHTVCLSK 84
Query: 332 SGEIYTWGHNNHGADLVGERRS--RSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQ 389
SG++Y++G N+ GA +G S S +P K+ + + +V +V+ G+ HTA ++ G+
Sbjct: 85 SGQVYSFGCNDEGA--LGRDTSVEGSEMVPGKV-ELQE--KVVQVSAGDSHTAALTDDGR 139
Query: 390 LFTYGD--GTFGVLGHGNLQNVSQ-PKEVESLRGLKVKSVACGPWHTAAIV---DIMVDR 443
+F +G GV+G S P +V+ + V VA G H + D+
Sbjct: 140 VFLWGSFRDNNGVIGLLEPMKKSMVPVQVQL--DVPVVKVASGNDHLVMLTADGDLYTLG 197
Query: 444 CKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCV---TR--LVDFDFVQASCGRMLTVG 498
C G+L + R G ER L+P CV +R F A CG T
Sbjct: 198 CGEQ---GQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFA 254
Query: 499 LTGLGKVYTMGSAVHGQLGNPKAKD----RSITVVEGKLKEEFVKGISSGSYHVAVLTSG 554
++ G VY G + + QLG P + +++T + K +V G S G +H + S
Sbjct: 255 ISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKS-WV-GFSGGQHHTVCMDSE 312
Query: 555 GSVYTWGKNANGQLGLGD-SQERETPTFVEALRDRQVESVVCGSSITAAI 603
G Y+ G+ G+LGLG+ ++E+ PT + L V SV CG+S+ A+
Sbjct: 313 GKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLP--AVSSVACGASVGYAV 360
Score = 268 (99.4 bits), Expect = 3.1e-20, P = 3.1e-20
Identities = 111/397 (27%), Positives = 182/397 (45%)
Query: 239 GSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKV 298
G + + ++ P L+ ++ DV G H ++K G+V+ +G +G LG
Sbjct: 46 GQLGLGENVMERKKPALV--SIPEDVVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDT 103
Query: 299 NMDVS--CPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG--HNNHGADLVGERRSR 354
+++ S P VE + VQ VS G+ T ALT G ++ WG +N+G + E +
Sbjct: 104 SVEGSEMVPGKVELQEKV-VQ-VSAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLEPMKK 161
Query: 355 SHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGH--------GNL 406
S +P ++ LD V V KVA G H +++ G L+T G G G LG G
Sbjct: 162 S-MVPVQV--QLD-VPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGR 217
Query: 407 QNVSQ---PKEV----ESLRG-LKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
Q + + PK V RG ++ + CG + T AI S+ G ++ +G
Sbjct: 218 QGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAI---------SHE--GHVYGFGL 266
Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDF--DFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
++ +LG E +P +T + +V S G+ TV + GK Y++G A +G+L
Sbjct: 267 SNYHQLGTPGTESCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRL 326
Query: 517 G-NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQE 575
G A+++SI + +L V ++ G+ +T G V+ WG N QLG G ++
Sbjct: 327 GLGEGAEEKSIPTLISRLPA--VSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQDED 384
Query: 576 RETPTFV--EALRDRQVESVVCGSSITAAICLHKSIS 610
+P + + L +R V SV G T + K S
Sbjct: 385 AWSPVEMMGKQLENRVVLSVSSGGQHTVLLVKDKEQS 421
>UNIPROTKB|Q96Q42 [details] [associations]
symbol:ALS2 "Alsin" species:9606 "Homo sapiens" [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001881 "receptor recycling"
evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA] [GO:0007528
"neuromuscular junction development" evidence=IEA] [GO:0007626
"locomotory behavior" evidence=IEA] [GO:0008104 "protein
localization" evidence=IEA] [GO:0008219 "cell death" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016050 "vesicle organization"
evidence=IEA] [GO:0016197 "endosomal transport" evidence=IEA]
[GO:0016601 "Rac protein signal transduction" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0032313 "regulation of Rab
GTPase activity" evidence=IEA] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange factor
activity" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0005769 "early endosome"
evidence=IDA] [GO:0007032 "endosome organization" evidence=IGI;NAS]
[GO:0043234 "protein complex" evidence=IDA] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IDA]
[GO:0017137 "Rab GTPase binding" evidence=NAS;IDA] [GO:0051036
"regulation of endosome size" evidence=IEP] [GO:0032855 "positive
regulation of Rac GTPase activity" evidence=IDA] [GO:0035022
"positive regulation of Rac protein signal transduction"
evidence=IC] [GO:0030425 "dendrite" evidence=IDA] [GO:0048812
"neuron projection morphogenesis" evidence=IDA] [GO:0043539
"protein serine/threonine kinase activator activity" evidence=IDA]
[GO:0045860 "positive regulation of protein kinase activity"
evidence=IDA] [GO:0001726 "ruffle" evidence=ISS] [GO:0030027
"lamellipodium" evidence=ISS] [GO:0005087 "Ran guanyl-nucleotide
exchange factor activity" evidence=NAS] [GO:0030676 "Rac
guanyl-nucleotide exchange factor activity" evidence=IDA]
[GO:0042803 "protein homodimerization activity" evidence=IPI]
[GO:0030426 "growth cone" evidence=ISS] [GO:0005813 "centrosome"
evidence=IDA] [GO:0071902 "positive regulation of protein
serine/threonine kinase activity" evidence=IDA] InterPro:IPR000219
InterPro:IPR001849 Pfam:PF00621 PROSITE:PS00741 PROSITE:PS50003
PROSITE:PS50010 SMART:SM00233 EMBL:AB053305 EMBL:AB053306
INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204 GO:GO:0005829
GO:GO:0005813 GO:GO:0043234 GO:GO:0014069 GO:GO:0008104
GO:GO:0006979 GO:GO:0016020 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0008219 EMBL:CH471063 GO:GO:0030424
GO:GO:0043025 GO:GO:0030425 GO:GO:0007528 GO:GO:0001701
GO:GO:0048812 GO:GO:0007626 GO:GO:0035249 GO:GO:0043539
GO:GO:0030027 GO:GO:0016197 GO:GO:0030426 Gene3D:1.20.900.10
SUPFAM:SSF48065 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0007409 GO:GO:0001726 GO:GO:0016601
GO:GO:0007032 eggNOG:COG4642 InterPro:IPR003409 InterPro:IPR003123
Pfam:PF02493 SMART:SM00698 PROSITE:PS51205 EMBL:AF391100
EMBL:AB046783 EMBL:AK023024 EMBL:AC007242 EMBL:AC007279
EMBL:BC029174 IPI:IPI00242146 IPI:IPI00295004 IPI:IPI00295005
RefSeq:NP_001129217.1 RefSeq:NP_065970.2 UniGene:Hs.471096
UniGene:Hs.621812 ProteinModelPortal:Q96Q42 SMR:Q96Q42
MINT:MINT-1632128 STRING:Q96Q42 PhosphoSite:Q96Q42 DMDM:296434394
PaxDb:Q96Q42 PRIDE:Q96Q42 Ensembl:ENST00000264276
Ensembl:ENST00000467448 GeneID:57679 KEGG:hsa:57679 UCSC:uc002uyo.3
UCSC:uc002uyq.3 UCSC:uc002uyr.3 CTD:57679 GeneCards:GC02M202564
H-InvDB:HIX0200249 HGNC:HGNC:443 HPA:HPA046588 MIM:205100
MIM:606352 MIM:606353 MIM:607225 neXtProt:NX_Q96Q42 Orphanet:803
Orphanet:293168 Orphanet:300605 Orphanet:247604 PharmGKB:PA24732
HOVERGEN:HBG037320 InParanoid:Q96Q42 KO:K04575 OMA:AKPAIDF
OrthoDB:EOG4FTVZP ChiTaRS:ALS2 GenomeRNAi:57679 NextBio:64490
ArrayExpress:Q96Q42 Bgee:Q96Q42 CleanEx:HS_ALS2
Genevestigator:Q96Q42 GermOnline:ENSG00000003393 GO:GO:0005769
GO:GO:0031982 GO:GO:0017137 GO:GO:0017112 GO:GO:0030676
GO:GO:0005087 GO:GO:0001662 GO:GO:0032855 GO:GO:0035022
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
Uniprot:Q96Q42
Length = 1657
Score = 225 (84.3 bits), Expect = 1.4e-20, Sum P(3) = 1.4e-20
Identities = 62/182 (34%), Positives = 97/182 (53%)
Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
V +LG KH L+T++GEV+ +G R G V + S P L L G V +V+ G
Sbjct: 43 VLQAALGVKHGVLLTEDGEVYSFGT-LPWRSG-PVEICPSSPILENALVGQYVITVATGS 100
Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDT----LDGVRVSKVACGEW 379
F + A+T +G Y WG N+ G V ++ P + D+ L VR+ ++ACGE
Sbjct: 101 FHSGAVTDNGVAYMWGENSAGQCAVANQQYVPEPNPVSIADSEASPLLAVRILQLACGEE 160
Query: 380 HTAIVSTSGQLFTYGDGT-FGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVD 438
HT +S S +++ +G G G++ V++P++VE L G V VACG +H+ A+V
Sbjct: 161 HTLALSISREIWAWGTGCQLGLIT--TAFPVTKPQKVEHLAGRVVLQVACGAFHSLALVQ 218
Query: 439 IM 440
+
Sbjct: 219 CL 220
Score = 149 (57.5 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 33/97 (34%), Positives = 50/97 (51%)
Query: 253 PKLLESAVMLDVQNISL-----GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKL 307
P+LL A + + + L G A L + EV+ WG+GK+G+LGH + P
Sbjct: 493 PRLLRKAARVKTRTVVLTPTYSGEADALLPSLRTEVWTWGKGKEGQLGHGDVLPRLQPLC 552
Query: 308 VECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHG 344
V+CL G V + G + + ALT ++Y+WG N G
Sbjct: 553 VKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGSNTFG 589
Score = 121 (47.7 bits), Expect = 6.4e-10, Sum P(3) = 6.4e-10
Identities = 33/115 (28%), Positives = 57/115 (49%)
Query: 404 GNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGR 463
G L VS P+ + +K ++V P ++ D ++ ++ +++TWG +G+
Sbjct: 486 GLLSQVS-PRLLRKAARVKTRTVVLTPTYSGE-ADALLPSLRT-----EVWTWGKGKEGQ 538
Query: 464 LGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
LGH D +L P CV L + + G ++ LT +VY+ GS GQLG+
Sbjct: 539 LGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGSNTFGQLGH 593
Score = 117 (46.2 bits), Expect = 6.4e-10, Sum P(3) = 6.4e-10
Identities = 42/139 (30%), Positives = 66/139 (47%)
Query: 255 LLESAVMLD-VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVEC--- 310
+LE+A++ V ++ G+ H+ VT G + WGE G+ V P V
Sbjct: 83 ILENALVGQYVITVATGSFHSGAVTDNGVAYMWGENSAGQCAVANQQYVPEPNPVSIADS 142
Query: 311 ----LSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTL 366
L + + ++CGE T AL+ S EI+ WG G L + P+K+ + L
Sbjct: 143 EASPLLAVRILQLACGEEHTLALSISREIWAWGT---GCQLGLITTAFPVTKPQKV-EHL 198
Query: 367 DGVRVSKVACGEWHT-AIV 384
G V +VACG +H+ A+V
Sbjct: 199 AGRVVLQVACGAFHSLALV 217
Score = 114 (45.2 bits), Expect = 1.4e-20, Sum P(3) = 1.4e-20
Identities = 30/97 (30%), Positives = 46/97 (47%)
Query: 504 KVYTMGSAVHGQLGN----PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYT 559
+V+T G GQLG+ P+ + + ++GK E + + +G YH LT+ VY+
Sbjct: 527 EVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGK---EVIH-LEAGGYHSLALTAKSQVYS 582
Query: 560 WGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCG 596
WG N GQLG D P + + V S+ G
Sbjct: 583 WGSNTFGQLGHSDFPTT-VPRLAKISSENGVWSIAAG 618
Score = 107 (42.7 bits), Expect = 1.7e-08, Sum P(3) = 1.7e-08
Identities = 34/105 (32%), Positives = 52/105 (49%)
Query: 377 GEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAI 436
GE + S +++T+G G G LGHG++ QP V+ L G +V + G +H+ A+
Sbjct: 515 GEADALLPSLRTEVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLAL 574
Query: 437 VDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRL 481
KS ++++WG G+LGH D PT V RL
Sbjct: 575 T------AKS-----QVYSWGSNTFGQLGHSD-----FPTTVPRL 603
Score = 96 (38.9 bits), Expect = 4.3e-07, Sum P(3) = 4.3e-07
Identities = 36/141 (25%), Positives = 59/141 (41%)
Query: 305 PKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRK--L 362
P+ + G V + G LT+ GE+Y++G + R P L
Sbjct: 32 PERLPGWGGKTVLQAALGVKHGVLLTEDGEVYSFG-------TLPWRSGPVEICPSSPIL 84
Query: 363 FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPK-------EV 415
+ L G V VA G +H+ V+ +G + +G+ + G N Q V +P E
Sbjct: 85 ENALVGQYVITVATGSFHSGAVTDNGVAYMWGENSAGQCAVANQQYVPEPNPVSIADSEA 144
Query: 416 ESLRGLKVKSVACGPWHTAAI 436
L +++ +ACG HT A+
Sbjct: 145 SPLLAVRILQLACGEEHTLAL 165
Score = 78 (32.5 bits), Expect = 7.0e-17, Sum P(3) = 7.0e-17
Identities = 18/47 (38%), Positives = 25/47 (53%)
Query: 557 VYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
V+TWGK GQLG GD R P V+ L ++V + G + A+
Sbjct: 528 VWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLAL 574
Score = 52 (23.4 bits), Expect = 1.4e-20, Sum P(3) = 1.4e-20
Identities = 20/71 (28%), Positives = 31/71 (43%)
Query: 613 DQSSCSQC-RMPFGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNKGKPSR--VCDTCY 669
D SSC +C + G +RK+ Y G K +T + KP R +C++
Sbjct: 870 DSSSCYECLALHLGRKRKEAE-YTLGFW--------KTFPGKMTDSLRKPERRLLCESS- 919
Query: 670 NHLQKITHSGR 680
N + H+GR
Sbjct: 920 NRALSLQHAGR 930
Score = 41 (19.5 bits), Expect = 4.1e-13, Sum P(3) = 4.1e-13
Identities = 11/34 (32%), Positives = 20/34 (58%)
Query: 561 GKNANGQLGLGDSQERETPTFVEALRDRQVESVV 594
G +A G GL DS+E + E+++ ++ S+V
Sbjct: 437 GSSAIGPEGLKDSREEQVKQ--ESMQGKKSSSLV 468
>UNIPROTKB|A7Z018 [details] [associations]
symbol:RCC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0000794 "condensed nuclear chromosome" evidence=IEA]
[GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=IEA] [GO:0051225
"spindle assembly" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031492 "nucleosomal DNA binding" evidence=IEA] [GO:0007090
"regulation of S phase of mitotic cell cycle" evidence=IEA]
[GO:0007088 "regulation of mitosis" evidence=IEA] [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0007052 "mitotic spindle
organization" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 GO:GO:0007088 GO:GO:0007059 GO:GO:0007052
GO:GO:0051225 GO:GO:0000082 GO:GO:0031965 GO:GO:0000790
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0000794
GO:GO:0005087 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 GO:GO:0007090 GO:GO:0031492
GeneTree:ENSGT00700000104160 KO:K11493 CTD:1104
HOGENOM:HOG000234341 HOVERGEN:HBG017712 OrthoDB:EOG4320Z9
EMBL:DAAA02006335 EMBL:BC153215 IPI:IPI00868581
RefSeq:NP_001098878.1 UniGene:Bt.54942 SMR:A7Z018 STRING:A7Z018
Ensembl:ENSBTAT00000032060 GeneID:534142 KEGG:bta:534142
InParanoid:A7Z018 OMA:GTESCFV NextBio:20876286 Uniprot:A7Z018
Length = 422
Score = 270 (100.1 bits), Expect = 1.9e-20, P = 1.9e-20
Identities = 107/348 (30%), Positives = 165/348 (47%)
Query: 273 HAALVTKEGEVFCWGEGKDGRLGHKVN-MDVSCPKLVECLSGINVQSVSCGEFQTCALTK 331
H + T+ G V G+G G+LG N M+ P LV I VQ+ G T L+K
Sbjct: 27 HRSHGTEPGVVLTLGQGDVGQLGLGENVMERKKPALVSIPEDI-VQA-EAGGMHTVCLSK 84
Query: 332 SGEIYTWGHNNHGADLVGERRS--RSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQ 389
SG++Y++G N+ GA +G S S +P K+ D + +V +V+ G+ HTA ++ G+
Sbjct: 85 SGQVYSFGCNDEGA--LGRDTSVEGSEMVPGKV-DLQE--KVIQVSAGDSHTAALTEDGR 139
Query: 390 LFTYGD--GTFGVLGHGNLQNVSQ-PKEVESLRGLKVKSVACGPWHTAAI-VDIMVDRCK 445
+F +G GV+G S P +V+ + V VA G H + VD +
Sbjct: 140 VFLWGSFRDNNGVIGLLEPMKKSMVPVQVQL--SVPVVKVASGNDHLVMLTVDGDLYTLG 197
Query: 446 SNAIGGKLFTWGDADKGRLGHVDGERKLLPTCV---TR--LVDFDFVQASCGRMLTVGLT 500
S G+L + R G ER L+P CV +R F A CG T ++
Sbjct: 198 SGE-QGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAIS 256
Query: 501 GLGKVYTMGSAVHGQLGNPKAKD----RSITVVEGKLKEEFVKGISSGSYHVAVLTSGGS 556
G VY G + + QLG + +++T + K +V G S G +H + S G
Sbjct: 257 SEGHVYGFGLSNYHQLGTQGTESCFVPQNLTSFKNSTKS-WV-GFSGGQHHTVCMDSEGK 314
Query: 557 VYTWGKNANGQLGLGD-SQERETPTFVEALRDRQVESVVCGSSITAAI 603
Y+ G+ G+LGLG+ ++E+ PT + L V SV CG+S+ A+
Sbjct: 315 AYSLGRAEYGRLGLGEGAEEKSVPTLIPRLPT--VSSVACGASVGYAV 360
Score = 255 (94.8 bits), Expect = 1.0e-18, P = 1.0e-18
Identities = 104/397 (26%), Positives = 181/397 (45%)
Query: 239 GSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKV 298
G + + ++ P L+ ++ D+ G H ++K G+V+ +G +G LG
Sbjct: 46 GQLGLGENVMERKKPALV--SIPEDIVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDT 103
Query: 299 NMDVS--CPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG--HNNHGADLVGERRSR 354
+++ S P V+ + +Q VS G+ T ALT+ G ++ WG +N+G + E +
Sbjct: 104 SVEGSEMVPGKVDLQEKV-IQ-VSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLEPMKK 161
Query: 355 SHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGH--------GNL 406
S +P ++ L V V KVA G H +++ G L+T G G G LG G
Sbjct: 162 S-MVPVQV--QLS-VPVVKVASGNDHLVMLTVDGDLYTLGSGEQGQLGRVPELFANRGGR 217
Query: 407 QNVSQ---PKEV----ESLRG-LKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
Q + + PK V RG ++ + CG + T AI + G ++ +G
Sbjct: 218 QGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAI-----------SSEGHVYGFGL 266
Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDF--DFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
++ +LG E +P +T + +V S G+ TV + GK Y++G A +G+L
Sbjct: 267 SNYHQLGTQGTESCFVPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRL 326
Query: 517 G-NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQE 575
G A+++S+ + +L V ++ G+ +T G V+ WG N QLG G ++
Sbjct: 327 GLGEGAEEKSVPTLIPRLPT--VSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQDED 384
Query: 576 RETPTFV--EALRDRQVESVVCGSSITAAICLHKSIS 610
+P + + L +R V +V G T + K S
Sbjct: 385 AWSPVEMTGKQLENRVVLTVSSGGQHTVLLVKDKEQS 421
>UNIPROTKB|F1RMH6 [details] [associations]
symbol:RCCD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
OMA:ERPGAWF GeneTree:ENSGT00700000104312 EMBL:CT868688
Ensembl:ENSSSCT00000002041 Uniprot:F1RMH6
Length = 382
Score = 166 (63.5 bits), Expect = 2.8e-20, Sum P(2) = 2.8e-20
Identities = 31/86 (36%), Positives = 51/86 (59%)
Query: 259 AVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQS 318
A L + + LGA+HA L+ G+VF WG G+ G+LGH P+++E L G+ +
Sbjct: 161 APTLRARRLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAEREPRVLEALQGLPMAE 220
Query: 319 VSCGEFQTCALTKSGEIYTWGHNNHG 344
V+ G + + ++++G+IY WG N G
Sbjct: 221 VAAGGWHSVCVSETGDIYIWGWNESG 246
Score = 155 (59.6 bits), Expect = 2.8e-20, Sum P(2) = 2.8e-20
Identities = 30/74 (40%), Positives = 48/74 (64%)
Query: 362 LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESL--R 419
L D G K +CG HTA+V+ +G+L+T+G G +G LGH + ++ +P VE +
Sbjct: 299 LLDLPLGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHKDTTSLDRPCRVEYFVDK 358
Query: 420 GLKVKSVACGPWHT 433
L+V++V+CGPW+T
Sbjct: 359 QLQVRTVSCGPWNT 372
Score = 148 (57.2 bits), Expect = 2.0e-14, Sum P(3) = 2.0e-14
Identities = 31/96 (32%), Positives = 52/96 (54%)
Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
+R ++ G H ++ +GQ+F++G G G LGHG L+ +P+ +E+L+GL + VA
Sbjct: 164 LRARRLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAEREPRVLEALQGLPMAEVAA 223
Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRL 464
G WH+ C S G ++ WG + G+L
Sbjct: 224 GGWHSV---------CVSET--GDIYIWGWNESGQL 248
Score = 142 (55.0 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 45/134 (33%), Positives = 64/134 (47%)
Query: 197 NESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDAL--LPK 254
NES +L P S + K I D E G + A +G T A+ P
Sbjct: 243 NESGQLALPAR-SLAEDGKTITGDAPGLNED--GSEAKRATEGE-DGGPTPFIAVQPFPA 298
Query: 255 LLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECL--S 312
LL+ + D S G++H A+VT+ GE++ WG GK G+LGHK + P VE
Sbjct: 299 LLDLPLGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHKDTTSLDRPCRVEYFVDK 358
Query: 313 GINVQSVSCGEFQT 326
+ V++VSCG + T
Sbjct: 359 QLQVRTVSCGPWNT 372
Score = 122 (48.0 bits), Expect = 7.7e-17, Sum P(2) = 7.7e-17
Identities = 42/128 (32%), Positives = 58/128 (45%)
Query: 489 ASCGRMLTVGLTGLGKVYTMGS-AVHGQLGNPK---AKDRSITVVEGKLKEEFVKGISSG 544
A G+ +T GL + + A G+ G P A +++ L + VK S G
Sbjct: 256 AEDGKTITGDAPGLNEDGSEAKRATEGEDGGPTPFIAVQPFPALLDLPLGSDAVKA-SCG 314
Query: 545 SYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQ--VESVVCGSSITAA 602
S H AV+T G +YTWG GQLG D+ + P VE D+Q V +V CG T
Sbjct: 315 SRHTAVVTRTGELYTWGWGKYGQLGHKDTTSLDRPCRVEYFVDKQLQVRTVSCGPWNTYV 374
Query: 603 ICLHKSIS 610
+ K S
Sbjct: 375 FAVEKEKS 382
Score = 117 (46.2 bits), Expect = 6.0e-07, Sum P(2) = 6.0e-07
Identities = 31/98 (31%), Positives = 52/98 (53%)
Query: 288 EGKDGRLGHKVNMDVS-CPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGAD 346
EG+DG G + V P L++ G + SCG T +T++GE+YTWG +G
Sbjct: 281 EGEDG--GPTPFIAVQPFPALLDLPLGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQ- 337
Query: 347 LVGERRSRSHWLPRKLFDTLDG-VRVSKVACGEWHTAI 383
+G + + S P ++ +D ++V V+CG W+T +
Sbjct: 338 -LGHKDTTSLDRPCRVEYFVDKQLQVRTVSCGPWNTYV 374
Score = 111 (44.1 bits), Expect = 2.1e-10, Sum P(3) = 2.1e-10
Identities = 24/88 (27%), Positives = 44/88 (50%)
Query: 314 INVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSK 373
+ + + G L +G++++WG HG +G + PR L + L G+ +++
Sbjct: 164 LRARRLELGAEHALLLDAAGQVFSWGGGRHGQ--LGHGTLEAEREPRVL-EALQGLPMAE 220
Query: 374 VACGEWHTAIVSTSGQLFTYGDGTFGVL 401
VA G WH+ VS +G ++ +G G L
Sbjct: 221 VAAGGWHSVCVSETGDIYIWGWNESGQL 248
Score = 82 (33.9 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 24/68 (35%), Positives = 35/68 (51%)
Query: 485 DFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAK--DRSITVVEGKLKEEFVKGIS 542
D V+ASCG T +T G++YT G +GQLG+ DR V K+ V+ +S
Sbjct: 307 DAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHKDTTSLDRPCRVEYFVDKQLQVRTVS 366
Query: 543 SGSYHVAV 550
G ++ V
Sbjct: 367 CGPWNTYV 374
Score = 79 (32.9 bits), Expect = 3.8e-11, Sum P(2) = 3.8e-11
Identities = 15/61 (24%), Positives = 32/61 (52%)
Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
GG G + + + P++LE+ L + ++ G H+ V++ G+++ WG + G+
Sbjct: 189 GGGRHGQLGHGTLEAERE-PRVLEALQGLPMAEVAAGGWHSVCVSETGDIYIWGWNESGQ 247
Query: 294 L 294
L
Sbjct: 248 L 248
Score = 65 (27.9 bits), Expect = 6.3e-11, Sum P(2) = 6.3e-11
Identities = 27/72 (37%), Positives = 34/72 (47%)
Query: 423 VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLV 482
VK+ +CG HTA +V R G+L+TWG G+LGH D P V V
Sbjct: 309 VKA-SCGSRHTA-----VVTRT------GELYTWGWGKYGQLGHKDTTSLDRPCRVEYFV 356
Query: 483 DFDF-VQA-SCG 492
D V+ SCG
Sbjct: 357 DKQLQVRTVSCG 368
Score = 38 (18.4 bits), Expect = 2.0e-14, Sum P(3) = 2.0e-14
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 253 PKLLE-SAVMLDVQNISLGAKHAALVTKEGEV 283
P+ LE LDV +S + A VT+ G +
Sbjct: 32 PEPLEVPGASLDVCRVSASWSYTATVTRGGRL 63
>MGI|MGI:2444156 [details] [associations]
symbol:Rccd1 "RCC1 domain containing 1" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] MGI:MGI:2444156
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005886 GO:GO:0005737
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 CTD:91433 HOGENOM:HOG000154085 HOVERGEN:HBG061852
OMA:ERPGAWF OrthoDB:EOG41NTMF EMBL:AK030872 EMBL:AK084219
EMBL:AK088662 EMBL:BC069844 IPI:IPI00881984 IPI:IPI00896067
RefSeq:NP_775621.2 UniGene:Mm.474502 ProteinModelPortal:Q8BTU7
SMR:Q8BTU7 PhosphoSite:Q8BTU7 PRIDE:Q8BTU7
Ensembl:ENSMUST00000047362 Ensembl:ENSMUST00000121882 GeneID:269955
KEGG:mmu:269955 UCSC:uc009ial.2 GeneTree:ENSGT00700000104312
InParanoid:Q8BTU7 NextBio:393123 Bgee:Q8BTU7 Genevestigator:Q8BTU7
Uniprot:Q8BTU7
Length = 377
Score = 174 (66.3 bits), Expect = 2.9e-20, Sum P(2) = 2.9e-20
Identities = 32/84 (38%), Positives = 53/84 (63%)
Query: 262 LDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGH-KVNMDVSCPKLVECLSGINVQSVS 320
L V+ + LGA+H L+ G+VF WG G+ G+LGH + ++ P+L+E L G+ + V+
Sbjct: 161 LRVRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHGTLEAELE-PRLLEALQGLRMAKVA 219
Query: 321 CGEFQTCALTKSGEIYTWGHNNHG 344
G + + L+++G+IY WG N G
Sbjct: 220 AGGWHSVCLSETGDIYIWGWNESG 243
Score = 150 (57.9 bits), Expect = 9.5e-15, Sum P(2) = 9.5e-15
Identities = 32/96 (33%), Positives = 54/96 (56%)
Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
+RV ++ G H ++ +GQ+F++G G G LGHG L+ +P+ +E+L+GL++ VA
Sbjct: 161 LRVRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHGTLEAELEPRLLEALQGLRMAKVAA 220
Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRL 464
G WH+ C S G ++ WG + G+L
Sbjct: 221 GGWHSV---------CLSET--GDIYIWGWNESGQL 245
Score = 146 (56.5 bits), Expect = 2.9e-20, Sum P(2) = 2.9e-20
Identities = 30/74 (40%), Positives = 46/74 (62%)
Query: 362 LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESL--R 419
L D G +CG HTA+V+ +G+L+T+G G +G LGH + ++ +P VE R
Sbjct: 294 LLDLPLGSDAVMASCGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTSLDRPCCVEYFVER 353
Query: 420 GLKVKSVACGPWHT 433
L+V++V CGPW+T
Sbjct: 354 QLEVRAVTCGPWNT 367
Score = 140 (54.3 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 41/132 (31%), Positives = 64/132 (48%)
Query: 197 NESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLL 256
NES +L PT E K ++ E L ++ A D + + P LL
Sbjct: 240 NESGQLALPTRSGT--ENKAEREEATELNEDGLKEELAVA-DAGAPAHFIAIQPF-PALL 295
Query: 257 ESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECL--SGI 314
+ + D S G++H A+VT+ GE++ WG GK G+LGHK + + P VE +
Sbjct: 296 DLPLGSDAVMASCGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTSLDRPCCVEYFVERQL 355
Query: 315 NVQSVSCGEFQT 326
V++V+CG + T
Sbjct: 356 EVRAVTCGPWNT 367
Score = 119 (46.9 bits), Expect = 1.9e-17, Sum P(2) = 1.9e-17
Identities = 27/57 (47%), Positives = 33/57 (57%)
Query: 542 SSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVE--SVVCG 596
S GS H AV+T G +YTWG GQLG DS + P VE +RQ+E +V CG
Sbjct: 307 SCGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTSLDRPCCVEYFVERQLEVRAVTCG 363
Score = 105 (42.0 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 25/80 (31%), Positives = 41/80 (51%)
Query: 305 PKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFD 364
P L++ G + SCG T +T++GE+YTWG +G +G + S S P +
Sbjct: 292 PALLDLPLGSDAVMASCGSRHTAVVTRTGELYTWGWGKYGQ--LGHKDSTSLDRPCCVEY 349
Query: 365 TLDG-VRVSKVACGEWHTAI 383
++ + V V CG W+T +
Sbjct: 350 FVERQLEVRAVTCGPWNTYV 369
Score = 94 (38.1 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 32/109 (29%), Positives = 50/109 (45%)
Query: 451 GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
G++F+WG G+LGH E +L P + L + + G +V L+ G +Y G
Sbjct: 180 GQVFSWGAGRHGQLGHGTLEAELEPRLLEALQGLRMAKVAAGGWHSVCLSETGDIYIWGW 239
Query: 511 AVHGQLGNP-------KAKDRSITVV-EGKLKEEF-VKGISSGSYHVAV 550
GQL P KA+ T + E LKEE V + ++ +A+
Sbjct: 240 NESGQLALPTRSGTENKAEREEATELNEDGLKEELAVADAGAPAHFIAI 288
Score = 82 (33.9 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 30/97 (30%), Positives = 46/97 (47%)
Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
AD G H + P + + D V ASCG T +T G++YT G +GQLG+
Sbjct: 277 ADAGAPAHFIAIQPF-PALLDLPLGSDAVMASCGSRHTAVVTRTGELYTWGWGKYGQLGH 335
Query: 519 PKAK--DRSITV---VEGKLKEEFVKGISSGSYHVAV 550
+ DR V VE +L+ V+ ++ G ++ V
Sbjct: 336 KDSTSLDRPCCVEYFVERQLE---VRAVTCGPWNTYV 369
Score = 77 (32.2 bits), Expect = 5.9e-10, Sum P(2) = 5.9e-10
Identities = 15/61 (24%), Positives = 32/61 (52%)
Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
G G + + + L P+LLE+ L + ++ G H+ +++ G+++ WG + G+
Sbjct: 186 GAGRHGQLGHGTLEAE-LEPRLLEALQGLRMAKVAAGGWHSVCLSETGDIYIWGWNESGQ 244
Query: 294 L 294
L
Sbjct: 245 L 245
Score = 75 (31.5 bits), Expect = 6.9e-13, Sum P(2) = 6.9e-13
Identities = 25/68 (36%), Positives = 33/68 (48%)
Query: 427 ACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF 486
+CG HTA +V R G+L+TWG G+LGH D P CV V+
Sbjct: 307 SCGSRHTA-----VVTRT------GELYTWGWGKYGQLGHKDSTSLDRPCCVEYFVERQL 355
Query: 487 -VQA-SCG 492
V+A +CG
Sbjct: 356 EVRAVTCG 363
>RGD|1310372 [details] [associations]
symbol:Als2 "amyotrophic lateral sclerosis 2 (juvenile)"
species:10116 "Rattus norvegicus" [GO:0001662 "behavioral fear
response" evidence=IEA;ISO] [GO:0001701 "in utero embryonic
development" evidence=IEP] [GO:0001726 "ruffle" evidence=IEA;ISO]
[GO:0001881 "receptor recycling" evidence=IEA;ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0005085 "guanyl-nucleotide
exchange factor activity" evidence=ISO;ISS] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0005769 "early endosome" evidence=ISO;ISS]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=ISO;ISS] [GO:0006979 "response to oxidative stress"
evidence=IEA;ISO] [GO:0007032 "endosome organization" evidence=ISO]
[GO:0007409 "axonogenesis" evidence=IMP] [GO:0007528 "neuromuscular
junction development" evidence=IEA;ISO] [GO:0007626 "locomotory
behavior" evidence=IEA;ISO] [GO:0008104 "protein localization"
evidence=IEA;ISO] [GO:0008219 "cell death" evidence=IMP]
[GO:0014069 "postsynaptic density" evidence=IEA;ISO] [GO:0016020
"membrane" evidence=IDA] [GO:0016050 "vesicle organization"
evidence=IEA;ISO] [GO:0016197 "endosomal transport"
evidence=IEA;ISO] [GO:0016601 "Rac protein signal transduction"
evidence=IDA] [GO:0017112 "Rab guanyl-nucleotide exchange factor
activity" evidence=ISO;ISS] [GO:0017137 "Rab GTPase binding"
evidence=ISO;ISS] [GO:0030027 "lamellipodium" evidence=IEA;ISO]
[GO:0030424 "axon" evidence=IDA] [GO:0030425 "dendrite"
evidence=ISO;ISS;IDA] [GO:0030426 "growth cone" evidence=IDA]
[GO:0030676 "Rac guanyl-nucleotide exchange factor activity"
evidence=ISO;ISS] [GO:0031982 "vesicle" evidence=ISO;ISS]
[GO:0032313 "regulation of Rab GTPase activity" evidence=IEA;ISO]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=ISO;ISS] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IEA;ISO] [GO:0042803 "protein
homodimerization activity" evidence=ISO;ISS] [GO:0043005 "neuron
projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0043197 "dendritic spine" evidence=ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IDA] [GO:0043234 "protein complex" evidence=ISO;ISS]
[GO:0043539 "protein serine/threonine kinase activator activity"
evidence=ISO;ISS] [GO:0045860 "positive regulation of protein
kinase activity" evidence=ISO;ISS] [GO:0048812 "neuron projection
morphogenesis" evidence=ISO;ISS] [GO:0051036 "regulation of
endosome size" evidence=ISO;ISS] [GO:0071902 "positive regulation
of protein serine/threonine kinase activity" evidence=ISO]
InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621 PROSITE:PS00741
PROSITE:PS50003 PROSITE:PS50010 SMART:SM00233 RGD:1310372
INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204 GO:GO:0005829
GO:GO:0005813 GO:GO:0043234 GO:GO:0042803 GO:GO:0014069
GO:GO:0008104 GO:GO:0006979 GO:GO:0016020 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0008219 GO:GO:0030424
GO:GO:0043025 GO:GO:0030425 GO:GO:0007528 GO:GO:0001701
GO:GO:0007626 GO:GO:0035249 GO:GO:0043539 GO:GO:0016197
GO:GO:0030426 Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0007409 GO:GO:0016601
eggNOG:COG4642 InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493
SMART:SM00698 PROSITE:PS51205 GeneTree:ENSGT00600000084242
CTD:57679 HOVERGEN:HBG037320 KO:K04575 OrthoDB:EOG4FTVZP
GO:GO:0005769 GO:GO:0031982 GO:GO:0017137 GO:GO:0017112
GO:GO:0030676 GO:GO:0001662 GO:GO:0032855 GO:GO:0001881
GO:GO:0051036 GO:GO:0032313 GO:GO:0016050 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
HOGENOM:HOG000033908 EMBL:AABR03068212 EMBL:BK005190
IPI:IPI00366955 RefSeq:NP_001013431.1 UniGene:Rn.219733
ProteinModelPortal:P0C5Y8 STRING:P0C5Y8 PhosphoSite:P0C5Y8
Ensembl:ENSRNOT00000035209 GeneID:363235 KEGG:rno:363235
UCSC:RGD:1310372 InParanoid:P0C5Y8 NextBio:682932
Genevestigator:P0C5Y8 Uniprot:P0C5Y8
Length = 1651
Score = 233 (87.1 bits), Expect = 4.1e-20, Sum P(2) = 4.1e-20
Identities = 67/199 (33%), Positives = 105/199 (52%)
Query: 250 ALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPK--L 307
+L P+ L V +LG KH L+T++GEV+ +G L K CP L
Sbjct: 29 SLTPERLPGWGGKTVLQAALGVKHGVLLTEDGEVYSFGT-----LPWKSEAAEICPSSPL 83
Query: 308 VE-CLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDT- 365
+E L G +V +V+ G F + A+T+SG +Y WG N G V ++ S P + D+
Sbjct: 84 LESALVGHHVVTVATGSFHSGAVTESGVVYMWGENAAGQCAVANQQYVSEPSPVSISDSE 143
Query: 366 ---LDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT-FGVLGHGNLQNVSQPKEVESLRGL 421
L VR+ ++ACGE HT +S S +++ +G G G++ V++P++VE L G
Sbjct: 144 TSPLLAVRILQLACGEEHTLALSISREIWAWGTGCQLGLIT--TTFPVTKPQKVEHLAGR 201
Query: 422 KVKSVACGPWHTAAIVDIM 440
V VACG +H+ A+V +
Sbjct: 202 VVLQVACGAFHSLALVQCL 220
Score = 144 (55.7 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 33/97 (34%), Positives = 49/97 (50%)
Query: 253 PKLLESAVMLDVQNISL-----GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKL 307
P+LL A + + + L G A L + EV+ WG+GK+G+LGH + P
Sbjct: 487 PRLLRKAARVKTRTVVLTPTYSGEADALLPSLRTEVWTWGKGKEGQLGHGDVLPRLQPLC 546
Query: 308 VECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHG 344
V+CL G V + G + ALT ++Y+WG N G
Sbjct: 547 VKCLDGKEVIHLEAGGSHSLALTAKSQVYSWGSNTFG 583
Score = 103 (41.3 bits), Expect = 4.1e-20, Sum P(2) = 4.1e-20
Identities = 32/95 (33%), Positives = 45/95 (47%)
Query: 504 KVYTMGSAVHGQLGN----PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYT 559
+V+T G GQLG+ P+ + + ++GK E + + +G H LT+ VY+
Sbjct: 521 EVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGK---EVIH-LEAGGSHSLALTAKSQVYS 576
Query: 560 WGKNANGQLGLGDSQERETPTFVEALRDRQVESVV 594
WG N GQLG E PT V L ES V
Sbjct: 577 WGSNTFGQLG-----HSEFPTTVPRLSKVSSESGV 606
Score = 84 (34.6 bits), Expect = 3.9e-18, Sum P(2) = 3.9e-18
Identities = 19/47 (40%), Positives = 26/47 (55%)
Query: 557 VYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
V+TWGK GQLG GD R P V+ L ++V + G S + A+
Sbjct: 522 VWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGSHSLAL 568
>UNIPROTKB|I3LT85 [details] [associations]
symbol:RCC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051225 "spindle assembly" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0031492 "nucleosomal DNA binding" evidence=IEA]
[GO:0007090 "regulation of S phase of mitotic cell cycle"
evidence=IEA] [GO:0007088 "regulation of mitosis" evidence=IEA]
[GO:0007059 "chromosome segregation" evidence=IEA] [GO:0007052
"mitotic spindle organization" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005087 "Ran guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0000794 "condensed
nuclear chromosome" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IEA] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
GO:GO:0007088 GO:GO:0007059 GO:GO:0007052 GO:GO:0051225
GO:GO:0000082 GO:GO:0031965 GO:GO:0000790 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0000794 GO:GO:0005087
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0007090 GO:GO:0031492 GeneTree:ENSGT00700000104160 KO:K11493
CTD:1104 OMA:GTESCFV EMBL:FP565629 RefSeq:XP_003482053.1
Ensembl:ENSSSCT00000028011 GeneID:100621543 KEGG:ssc:100621543
Uniprot:I3LT85
Length = 421
Score = 267 (99.0 bits), Expect = 4.2e-20, P = 4.2e-20
Identities = 103/347 (29%), Positives = 163/347 (46%)
Query: 273 HAALVTKEGEVFCWGEGKDGRLGHKVN-MDVSCPKLVECLSGINVQSVSCGEFQTCALTK 331
H + T+ G V G+G G+LG N M+ P LV I VQ+ G T L+K
Sbjct: 27 HRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVPIPEDI-VQA-EAGGMHTVCLSK 84
Query: 332 SGEIYTWGHNNHGADLVGERRS--RSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQ 389
SG++Y++G N+ GA +G S S +P K+ + + +V +V+ G+ HTA ++ G+
Sbjct: 85 SGQVYSFGCNDEGA--LGRDTSVEGSEMVPGKV-ELQE--KVVQVSAGDSHTAALTEDGR 139
Query: 390 LFTYGD--GTFGVLGHGNLQNVSQ-PKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
+F +G GV+G S P +V+ + V VA G H +
Sbjct: 140 VFLWGSFRDNNGVIGLLEPMKKSMVPVQVQL--SMPVVKVASGNDHLVMLTADGELYTLG 197
Query: 447 NAIGGKLFTWGDADKGRLGHVDGERKLLPTCV---TR--LVDFDFVQASCGRMLTVGLTG 501
+ G+L + R G ER L+P CV +R F A CG T ++
Sbjct: 198 SGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISS 257
Query: 502 LGKVYTMGSAVHGQLGNPKAKD----RSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSV 557
G VY G + + QLG P + +++T + K +V+ S G +H + S G
Sbjct: 258 EGHVYGFGLSNYHQLGTPGTESCFVPQNLTSFKNSTKS-WVR-FSGGQHHTVCMDSEGRA 315
Query: 558 YTWGKNANGQLGLGD-SQERETPTFVEALRDRQVESVVCGSSITAAI 603
Y+ G+ G+LGLG+ ++E+ PT + L V SV CG+S+ A+
Sbjct: 316 YSLGRAEYGRLGLGEGAEEKSVPTLISRLP--AVSSVACGASVGYAV 360
Score = 266 (98.7 bits), Expect = 5.4e-20, P = 5.4e-20
Identities = 112/409 (27%), Positives = 189/409 (46%)
Query: 229 LG-GDIGGAVDG-SVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCW 286
LG GD+G G +V + K AL+P + D+ G H ++K G+V+ +
Sbjct: 40 LGQGDVGQLGLGENVMERKKP--ALVP------IPEDIVQAEAGGMHTVCLSKSGQVYSF 91
Query: 287 GEGKDGRLGHKVNMDVS--CPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG--HNN 342
G +G LG +++ S P VE + VQ VS G+ T ALT+ G ++ WG +N
Sbjct: 92 GCNDEGALGRDTSVEGSEMVPGKVELQEKV-VQ-VSAGDSHTAALTEDGRVFLWGSFRDN 149
Query: 343 HGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLG 402
+G + E +S +P ++ ++ V KVA G H +++ G+L+T G G G LG
Sbjct: 150 NGVIGLLEPMKKS-MVPVQVQLSMP---VVKVASGNDHLVMLTADGELYTLGSGEQGQLG 205
Query: 403 H--------GNLQNVSQ---PKEV----ESLRG-LKVKSVACGPWHTAAIVDIMVDRCKS 446
G Q + + PK V RG ++ + CG + T AI
Sbjct: 206 RVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAI---------- 255
Query: 447 NAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDF--DFVQASCGRMLTVGLTGLGK 504
+ G ++ +G ++ +LG E +P +T + +V+ S G+ TV + G+
Sbjct: 256 -SSEGHVYGFGLSNYHQLGTPGTESCFVPQNLTSFKNSTKSWVRFSGGQHHTVCMDSEGR 314
Query: 505 VYTMGSAVHGQLG-NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKN 563
Y++G A +G+LG A+++S+ + +L V ++ G+ +T G V+ WG
Sbjct: 315 AYSLGRAEYGRLGLGEGAEEKSVPTLISRLPA--VSSVACGASVGYAVTKDGRVFAWGMG 372
Query: 564 ANGQLGLGDSQERETPTFV--EALRDRQVESVVCGSSITAAICLHKSIS 610
N QLG G ++ +P + + L +R V SV G T + K S
Sbjct: 373 TNYQLGTGQEEDAWSPVEMTGKQLENRMVLSVSSGGQHTVLLVKDKEQS 421
Score = 227 (85.0 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 97/347 (27%), Positives = 151/347 (43%)
Query: 226 EGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFC 285
EG LG D +V+GS ++P +E + V +S G H A +T++G VF
Sbjct: 96 EGALGRDT--SVEGS---------EMVPGKVE--LQEKVVQVSAGDSHTAALTEDGRVFL 142
Query: 286 WGEGKD--GRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNH 343
WG +D G +G M S + LS + V V+ G LT GE+YT G
Sbjct: 143 WGSFRDNNGVIGLLEPMKKSMVPVQVQLS-MPVVKVASGNDHLVMLTADGELYTLGSGEQ 201
Query: 344 GA-----DLVGERRSRSHW----LPRKLFDTLDG----VRVSKVACGEWHTAIVSTSGQL 390
G +L R R +P+ + G VR CG + T +S+ G +
Sbjct: 202 GQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISSEGHV 261
Query: 391 FTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKS---VACGPWHTAAIVDIMVDRCKSN 447
+ +G + LG ++ P+ + S + KS + G HT C +
Sbjct: 262 YGFGLSNYHQLGTPGTESCFVPQNLTSFKN-STKSWVRFSGGQHHTV---------CMDS 311
Query: 448 AIGGKLFTWGDADKGRLGHVDG-ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVY 506
G+ ++ G A+ GRLG +G E K +PT ++RL V +CG + +T G+V+
Sbjct: 312 E--GRAYSLGRAEYGRLGLGEGAEEKSVPTLISRLPAVSSV--ACGASVGYAVTKDGRVF 367
Query: 507 TMGSAVHGQLGNPKAKDR-SITVVEGK-LKEEFVKGISSGSYHVAVL 551
G + QLG + +D S + GK L+ V +SSG H +L
Sbjct: 368 AWGMGTNYQLGTGQEEDAWSPVEMTGKQLENRMVLSVSSGGQHTVLL 414
>TAIR|locus:2099986 [details] [associations]
symbol:AT3G55580 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] INTERPRO:IPR000408 Pfam:PF00415
EMBL:CP002686 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:AL132975
HSSP:P18754 IPI:IPI00521720 PIR:T47697 RefSeq:NP_191117.1
UniGene:At.35013 ProteinModelPortal:Q9M2S1 SMR:Q9M2S1 PRIDE:Q9M2S1
EnsemblPlants:AT3G55580.1 GeneID:824723 KEGG:ath:AT3G55580
TAIR:At3g55580 InParanoid:Q9M2S1 OMA:HPIPCIE PhylomeDB:Q9M2S1
ProtClustDB:CLSN2685056 Genevestigator:Q9M2S1 Uniprot:Q9M2S1
Length = 488
Score = 252 (93.8 bits), Expect = 4.1e-18, P = 4.1e-18
Identities = 54/171 (31%), Positives = 93/171 (54%)
Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
V+ I+ G +H+A++T G + +G G G+ G D P V L GI ++ V+ G
Sbjct: 313 VKKIACGGRHSAVITDTGALLTFGWGLYGQCGQGSTDDELSPTCVSSLLGIRIEEVAAGL 372
Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL-FDTLDGVRVSKVACGEWHTA 382
+ T + G++Y +G N G +G ++ LP+ L L+ V V ++CG HTA
Sbjct: 373 WHTTCASSDGDVYAFGGNQFGQ--LGTGCDQAETLPKLLEAPNLENVNVKTISCGARHTA 430
Query: 383 IVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHT 433
+++ G++F +G +G LG G++ + + P EV ++ K++ACG WHT
Sbjct: 431 VITDEGRVFCWGWNKYGQLGIGDVIDRNAPAEVR-IKDCFPKNIACGWWHT 480
Score = 245 (91.3 bits), Expect = 2.4e-17, P = 2.4e-17
Identities = 78/245 (31%), Positives = 117/245 (47%)
Query: 368 GVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGN-LQNVSQPKEVESLR------- 419
GVR+ VA G HT +S GQ++ +G G G LG G+ ++ VS P + +
Sbjct: 233 GVRIVSVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRVRLVSSPHPIPCIEPSSYGKA 292
Query: 420 ---GLKVKSVA-CGPWHTAAIVDIMVDRCKSNAIG--GKLFTWGDADKGRLGHVDGERKL 473
G+ + SV CG + + I S I G L T+G G+ G + +L
Sbjct: 293 TSSGVNMSSVVQCGRVLGSYVKKIACGGRHSAVITDTGALLTFGWGLYGQCGQGSTDDEL 352
Query: 474 LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSIT-VVEG- 531
PTCV+ L+ + + G T + G VY G GQLG + ++ ++E
Sbjct: 353 SPTCVSSLLGIRIEEVAAGLWHTTCASSDGDVYAFGGNQFGQLGTGCDQAETLPKLLEAP 412
Query: 532 KLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVE 591
L+ VK IS G+ H AV+T G V+ WG N GQLG+GD +R P V ++D +
Sbjct: 413 NLENVNVKTISCGARHTAVITDEGRVFCWGWNKYGQLGIGDVIDRNAPAEVR-IKDCFPK 471
Query: 592 SVVCG 596
++ CG
Sbjct: 472 NIACG 476
Score = 224 (83.9 bits), Expect = 5.1e-20, Sum P(2) = 5.1e-20
Identities = 59/186 (31%), Positives = 94/186 (50%)
Query: 368 GVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVA 427
G V K+ACG H+A+++ +G L T+G G +G G G+ + P V SL G++++ VA
Sbjct: 310 GSYVKKIACGGRHSAVITDTGALLTFGWGLYGQCGQGSTDDELSPTCVSSLLGIRIEEVA 369
Query: 428 CGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVT--RLVDFD 485
G WHT C S+ G ++ +G G+LG + + LP + L + +
Sbjct: 370 AGLWHTT---------CASS--DGDVYAFGGNQFGQLGTGCDQAETLPKLLEAPNLENVN 418
Query: 486 FVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGS 545
SCG T +T G+V+ G +GQLG DR+ E ++K+ F K I+ G
Sbjct: 419 VKTISCGARHTAVITDEGRVFCWGWNKYGQLGIGDVIDRNAPA-EVRIKDCFPKNIACGW 477
Query: 546 YHVAVL 551
+H +L
Sbjct: 478 WHTLLL 483
Score = 208 (78.3 bits), Expect = 2.9e-13, P = 2.9e-13
Identities = 60/202 (29%), Positives = 96/202 (47%)
Query: 295 GHKVNMDVSCPKLVEC--LSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR 352
G + V+ +V+C + G V+ ++CG + +T +G + T+G +G G+
Sbjct: 290 GKATSSGVNMSSVVQCGRVLGSYVKKIACGGRHSAVITDTGALLTFGWGLYGQ--CGQGS 347
Query: 353 SRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
+ P + L G+R+ +VA G WHT S+ G ++ +G FG LG G Q + P
Sbjct: 348 TDDELSPTCVSSLL-GIRIEEVAAGLWHTTCASSDGDVYAFGGNQFGQLGTGCDQAETLP 406
Query: 413 K--EVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGE 470
K E +L + VK+++CG HTA I D G++F WG G+LG D
Sbjct: 407 KLLEAPNLENVNVKTISCGARHTAVITD-----------EGRVFCWGWNKYGQLGIGDVI 455
Query: 471 RKLLPTCVTRLVDFDFVQASCG 492
+ P V R+ D +CG
Sbjct: 456 DRNAPAEV-RIKDCFPKNIACG 476
Score = 194 (73.4 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 42/153 (27%), Positives = 76/153 (49%)
Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
G + G Q T D L P + S + + ++ ++ G H + +G+V+ +G + G+
Sbjct: 336 GWGLYGQCGQGSTD-DELSPTCVSSLLGIRIEEVAAGLWHTTCASSDGDVYAFGGNQFGQ 394
Query: 294 LGHKVNMDVSCPKLVEC--LSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER 351
LG + + PKL+E L +NV+++SCG T +T G ++ WG N +G +G+
Sbjct: 395 LGTGCDQAETLPKLLEAPNLENVNVKTISCGARHTAVITDEGRVFCWGWNKYGQLGIGDV 454
Query: 352 RSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIV 384
R+ ++ D +ACG WHT ++
Sbjct: 455 IDRNAPAEVRIKDCFP----KNIACGWWHTLLL 483
Score = 147 (56.8 bits), Expect = 6.3e-12, Sum P(2) = 6.3e-12
Identities = 38/117 (32%), Positives = 58/117 (49%)
Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDR-SITVVEGKLKEEFVKGISSGSYHV 548
+CG + +T G + T G ++GQ G D S T V L ++ +++G +H
Sbjct: 317 ACGGRHSAVITDTGALLTFGWGLYGQCGQGSTDDELSPTCVSSLLGIR-IEEVAAGLWHT 375
Query: 549 AVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEA--LRDRQVESVVCGSSITAAI 603
+S G VY +G N GQLG G Q P +EA L + V+++ CG+ TA I
Sbjct: 376 TCASSDGDVYAFGGNQFGQLGTGCDQAETLPKLLEAPNLENVNVKTISCGARHTAVI 432
Score = 146 (56.5 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 38/104 (36%), Positives = 58/104 (55%)
Query: 231 GDI---GGAVDGSVSQNKTQVDALLPKLLESAVM--LDVQNISLGAKHAALVTKEGEVFC 285
GD+ GG G + Q + L PKLLE+ + ++V+ IS GA+H A++T EG VFC
Sbjct: 382 GDVYAFGGNQFGQLGTGCDQAETL-PKLLEAPNLENVNVKTISCGARHTAVITDEGRVFC 440
Query: 286 WGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCAL 329
WG K G+LG +D + P V + ++++CG + T L
Sbjct: 441 WGWNKYGQLGIGDVIDRNAPAEVR-IKDCFPKNIACGWWHTLLL 483
Score = 99 (39.9 bits), Expect = 6.3e-12, Sum P(2) = 6.3e-12
Identities = 50/204 (24%), Positives = 83/204 (40%)
Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGK---DGRLGHKVNMDVSCPKLV----ECLSGINV 316
VQ G H VT+ +V+ WG + GR+ +V+ D SC + + E +S +
Sbjct: 119 VQKAEAGWAHCVAVTENQQVYTWGWRECIPTGRVFGQVDGD-SCERNISFSTEQVSSSSQ 177
Query: 317 QSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTL----DGVRVS 372
S G + + G T + E S+S + L GVR+
Sbjct: 178 GKKSSGGTSSQVEGRGGGEPTKKRRISPSKQAAENSSQSDNIDLSALPCLVSLAPGVRIV 237
Query: 373 KVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGN-LQNVSQPKEVESLRGLKVKSVACGPW 431
VA G HT +S GQ++ +G G G LG G+ ++ VS P + +
Sbjct: 238 SVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRVRLVSSPHPIPCIEPSSYGKATSSGV 297
Query: 432 HTAAIVD---IMVDRCKSNAIGGK 452
+ +++V ++ K A GG+
Sbjct: 298 NMSSVVQCGRVLGSYVKKIACGGR 321
Score = 95 (38.5 bits), Expect = 5.1e-20, Sum P(2) = 5.1e-20
Identities = 29/98 (29%), Positives = 52/98 (53%)
Query: 242 SQNKTQVDAL----LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG-- 295
++N +Q D + LP L+ A + + +++ G +H ++ G+V+ WG G +G+LG
Sbjct: 210 AENSSQSDNIDLSALPCLVSLAPGVRIVSVAAGGRHTLALSDIGQVWGWGYGGEGQLGLG 269
Query: 296 HKVNMDVSCPKLVECL----------SGINVQSV-SCG 322
+V + VS P + C+ SG+N+ SV CG
Sbjct: 270 SRVRL-VSSPHPIPCIEPSSYGKATSSGVNMSSVVQCG 306
Score = 83 (34.3 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 57/248 (22%), Positives = 92/248 (37%)
Query: 277 VTKEGEVFCWG--EGKDGRLGHKVN-MDVSCPKLVECLSGINVQSVSCGEFQTCALTKSG 333
V + V+ WG G + ++ ++V P VE S +V CG F A +SG
Sbjct: 27 VVSQRVVYMWGYLPGASPQRSPLMSPVEVKIPPAVES-SWKDVSGGGCG-F-AMATAESG 83
Query: 334 EIYTWGHNNH-GADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFT 392
++ TWG + G V S H + F V V K G H V+ + Q++T
Sbjct: 84 KLITWGSTDDLGQSYV---TSGKHGETPEPFPLPPEVCVQKAEAGWAHCVAVTENQQVYT 140
Query: 393 YGDGTFGVLGH--GNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIG 450
+G G G + S + + S +V S + G + + R
Sbjct: 141 WGWRECIPTGRVFGQVDGDSCERNI-SFSTEQVSSSSQGKKSSGGTSSQVEGRGGGEPTK 199
Query: 451 GKLFTWGDADKGRLGHVDG-ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMG 509
+ + D + LP V+ V + G T+ L+ +G+V+ G
Sbjct: 200 KRRISPSKQAAENSSQSDNIDLSALPCLVSLAPGVRIVSVAAGGRHTLALSDIGQVWGWG 259
Query: 510 SAVHGQLG 517
GQLG
Sbjct: 260 YGGEGQLG 267
>UNIPROTKB|P23800 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:10036 "Mesocricetus auratus" [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0007059
"chromosome segregation" evidence=ISS] [GO:0031492 "nucleosomal DNA
binding" evidence=ISS] [GO:0051225 "spindle assembly" evidence=ISS]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
GO:GO:0007059 GO:GO:0051301 GO:GO:0007067 GO:GO:0051225
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0031492 HOVERGEN:HBG017712 EMBL:M33579 PIR:A34726
ProteinModelPortal:P23800 SMR:P23800 Uniprot:P23800
Length = 421
Score = 265 (98.3 bits), Expect = 7.0e-20, P = 7.0e-20
Identities = 104/350 (29%), Positives = 165/350 (47%)
Query: 273 HAALVTKEGEVFCWGEGKDGRLGHKVN-MDVSCPKLVECLSGINVQSVSCGEFQTCALTK 331
H + T+ G V G+G G+LG + ++ P LV L + VQ+ G T L +
Sbjct: 27 HRSHKTEPGLVLTLGQGDVGQLGLGESVLERKKPALVPLLQDV-VQA-EAGGMHTVCLNQ 84
Query: 332 SGEIYTWGHNNHGADLVGERRS--RSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQ 389
SG++Y++G N+ GA +G S S +P K+ + + +V +V+ G+ HTA ++ G+
Sbjct: 85 SGQVYSFGCNDEGA--LGRDTSVEGSEMVPGKV-ELQE--KVVQVSAGDSHTAALTEDGR 139
Query: 390 LFTYGD--GTFGVLGHGNLQNVSQ-PKEVESLRGLKVKSVACGPWHTAAIV---DIMVDR 443
+F +G GV+G S P +V+ + V VA G H + D+
Sbjct: 140 VFLWGSFRDNNGVIGLLEPMKKSMVPVQVQL--DMPVVKVASGNDHLVMLTTDGDLYTLG 197
Query: 444 CKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCV---TR--LVDFDFVQASCGRMLTVG 498
C G+L + R G ER L+P CV +R F A CG LT
Sbjct: 198 CGEQ---GQLGRVPELFANRGGRQGLERLLVPKCVLLKSRGSRGRVRFQDAFCGAYLTFA 254
Query: 499 LTGLGKVYTMGSAVHGQLGNPKAKD----RSITVVEGKLKEEFVKGISSGSYHVAVLTSG 554
++ G VY G + + QLG P +++T + K +V G S G +H + S
Sbjct: 255 ISREGHVYGFGLSNYHQLGTPGTASCFIPQNLTSFKNSTKS-WV-GFSGGQHHTICMDSE 312
Query: 555 GSVYTWGKNANGQLGLGD-SQERETPTFVEALRDRQVESVVCGSSITAAI 603
G Y+ G+ G+LGLG+ ++E+ PT + L V SV CG+S+ A+
Sbjct: 313 GKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLP--VVSSVACGASVGYAV 360
Score = 258 (95.9 bits), Expect = 4.6e-19, P = 4.6e-19
Identities = 116/409 (28%), Positives = 189/409 (46%)
Query: 229 LG-GDIGGAVDG-SVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCW 286
LG GD+G G SV + K AL+P LL+ DV G H + + G+V+ +
Sbjct: 40 LGQGDVGQLGLGESVLERKKP--ALVP-LLQ-----DVVQAEAGGMHTVCLNQSGQVYSF 91
Query: 287 GEGKDGRLGHKVNMDVS--CPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG--HNN 342
G +G LG +++ S P VE + VQ VS G+ T ALT+ G ++ WG +N
Sbjct: 92 GCNDEGALGRDTSVEGSEMVPGKVELQEKV-VQ-VSAGDSHTAALTEDGRVFLWGSFRDN 149
Query: 343 HGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLG 402
+G + E +S +P ++ LD + V KVA G H +++T G L+T G G G LG
Sbjct: 150 NGVIGLLEPMKKS-MVPVQV--QLD-MPVVKVASGNDHLVMLTTDGDLYTLGCGEQGQLG 205
Query: 403 H--------GNLQNVSQ---PKEV----ESLRG-LKVKSVACGPWHTAAIVDIMVDRCKS 446
G Q + + PK V RG ++ + CG + T AI
Sbjct: 206 RVPELFANRGGRQGLERLLVPKCVLLKSRGSRGRVRFQDAFCGAYLTFAI---------- 255
Query: 447 NAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDF--DFVQASCGRMLTVGLTGLGK 504
+ G ++ +G ++ +LG +P +T + +V S G+ T+ + GK
Sbjct: 256 -SREGHVYGFGLSNYHQLGTPGTASCFIPQNLTSFKNSTKSWVGFSGGQHHTICMDSEGK 314
Query: 505 VYTMGSAVHGQLG-NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKN 563
Y++G A +G+LG A+++SI + +L V ++ G+ ++ G V+ WG
Sbjct: 315 AYSLGRAEYGRLGLGEGAEEKSIPTLISRLP--VVSSVACGASVGYAVSKDGRVFAWGMG 372
Query: 564 ANGQLGLGDSQERETPTFV--EALRDRQVESVVCGSSITAAICLHKSIS 610
N QLG G ++ +P + + L +R V +V G T + K S
Sbjct: 373 TNYQLGTGQDEDAWSPVEMTGKQLENRVVLTVSSGGQHTVLLVKDKEQS 421
Score = 206 (77.6 bits), Expect = 3.3e-13, P = 3.3e-13
Identities = 95/347 (27%), Positives = 148/347 (42%)
Query: 226 EGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFC 285
EG LG D +V+GS ++P +E + V +S G H A +T++G VF
Sbjct: 96 EGALGRDT--SVEGS---------EMVPGKVE--LQEKVVQVSAGDSHTAALTEDGRVFL 142
Query: 286 WGEGKD--GRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNH 343
WG +D G +G M S V+ + V V+ G LT G++YT G
Sbjct: 143 WGSFRDNNGVIGLLEPMKKSMVP-VQVQLDMPVVKVASGNDHLVMLTTDGDLYTLGCGEQ 201
Query: 344 GA-----DLVGERRSRSHW----LPRKLFDTLDG----VRVSKVACGEWHTAIVSTSGQL 390
G +L R R +P+ + G VR CG + T +S G +
Sbjct: 202 GQLGRVPELFANRGGRQGLERLLVPKCVLLKSRGSRGRVRFQDAFCGAYLTFAISREGHV 261
Query: 391 FTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKS---VACGPWHTAAIVDIMVDRCKSN 447
+ +G + LG + P+ + S + KS + G HT C +
Sbjct: 262 YGFGLSNYHQLGTPGTASCFIPQNLTSFKN-STKSWVGFSGGQHHTI---------CMDS 311
Query: 448 AIGGKLFTWGDADKGRLGHVDG-ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVY 506
GK ++ G A+ GRLG +G E K +PT ++RL V +CG + ++ G+V+
Sbjct: 312 E--GKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPVVSSV--ACGASVGYAVSKDGRVF 367
Query: 507 TMGSAVHGQLGNPKAKDR-SITVVEGK-LKEEFVKGISSGSYHVAVL 551
G + QLG + +D S + GK L+ V +SSG H +L
Sbjct: 368 AWGMGTNYQLGTGQDEDAWSPVEMTGKQLENRVVLTVSSGGQHTVLL 414
>ZFIN|ZDB-GENE-090311-7 [details] [associations]
symbol:si:ch211-281g13.5 "si:ch211-281g13.5"
species:7955 "Danio rerio" [GO:0006464 "cellular protein
modification process" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-090311-7 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
eggNOG:COG5021 HOGENOM:HOG000208452 HOVERGEN:HBG050878
GeneTree:ENSGT00700000104312 EMBL:BX321880 IPI:IPI00899041
RefSeq:NP_001139103.1 UniGene:Dr.155114 Ensembl:ENSDART00000113315
GeneID:100148091 OMA:TLAWFPS NextBio:20791722 Uniprot:B8A4S7
Length = 992
Score = 274 (101.5 bits), Expect = 7.8e-20, P = 7.8e-20
Identities = 66/221 (29%), Positives = 117/221 (52%)
Query: 256 LESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG-HKVNMDVSCPKLVECLSGI 314
L+S V I+ G +H+ ++ +G++F WGE G+LG K P+ ++ L I
Sbjct: 109 LKSLENRQVIQIACGDQHSMALSNDGQLFVWGENTHGQLGLRKEQAGTQSPQHLQSLCEI 168
Query: 315 NVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKV 374
V +S G + L+ SG ++ WG N+ G +G+ + R ++P + +L G + +
Sbjct: 169 PVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTKDR--FVPT-IVKSLCGKKTVSI 225
Query: 375 ACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTA 434
+CG HTA +S G +FT+G G FG LGH +L++ P+ + L G KV V CG HT
Sbjct: 226 SCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLIAELWGSKVSQVTCGRHHTL 285
Query: 435 AIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLP 475
+ S+ + ++++G +G+LG+ + ++ +P
Sbjct: 286 VFEE-------SSKL---IYSFGCGMQGQLGNGEQVKQSVP 316
Score = 251 (93.4 bits), Expect = 2.3e-17, P = 2.3e-17
Identities = 66/217 (30%), Positives = 106/217 (48%)
Query: 365 TLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQ-PKEVESLRGLKV 423
+L+ +V ++ACG+ H+ +S GQLF +G+ T G LG Q +Q P+ ++SL + V
Sbjct: 111 SLENRQVIQIACGDQHSMALSNDGQLFVWGENTHGQLGLRKEQAGTQSPQHLQSLCEIPV 170
Query: 424 KSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVD 483
++ G H+ + ++ G +F WG G+LG D + + +PT V L
Sbjct: 171 AQISAGGNHSFVL-----------SLSGVVFGWGSNSAGQLGLGDTKDRFVPTIVKSLCG 219
Query: 484 FDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISS 543
V SCG T L+ G V+T GS GQLG+ KD + +L V ++
Sbjct: 220 KKTVSISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLIAELWGSKVSQVTC 279
Query: 544 GSYHVAVLTSGGS-VYTWGKNANGQLGLGDSQERETP 579
G +H V +Y++G GQLG G+ ++ P
Sbjct: 280 GRHHTLVFEESSKLIYSFGCGMQGQLGNGEQVKQSVP 316
Score = 234 (87.4 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 60/183 (32%), Positives = 86/183 (46%)
Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
G G + K Q P+ L+S + V IS G H+ +++ G VF WG G+
Sbjct: 140 GENTHGQLGLRKEQAGTQSPQHLQSLCEIPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQ 199
Query: 294 LGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRS 353
LG D P +V+ L G S+SCG T L+K G ++T+G G +G
Sbjct: 200 LGLGDTKDRFVPTIVKSLCGKKTVSISCGGEHTATLSKGGTVFTFGSGGFGQ--LGHNSL 257
Query: 354 RSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQL-FTYGDGTFGVLGHGNLQNVSQP 412
+ PR L L G +VS+V CG HT + S +L +++G G G LG+G S P
Sbjct: 258 KDEHHPR-LIAELWGSKVSQVTCGRHHTLVFEESSKLIYSFGCGMQGQLGNGEQVKQSVP 316
Query: 413 KEV 415
V
Sbjct: 317 LPV 319
Score = 197 (74.4 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 59/186 (31%), Positives = 88/186 (47%)
Query: 413 KEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG-HVDGER 471
+ ++SL +V +ACG H+ A+ SN G+LF WG+ G+LG +
Sbjct: 107 RPLKSLENRQVIQIACGDQHSMAL---------SN--DGQLFVWGENTHGQLGLRKEQAG 155
Query: 472 KLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSI-TVVE 530
P + L + Q S G + L+ G V+ GS GQLG KDR + T+V+
Sbjct: 156 TQSPQHLQSLCEIPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTKDRFVPTIVK 215
Query: 531 GKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQV 590
++ V IS G H A L+ GG+V+T+G GQLG ++ P + L +V
Sbjct: 216 SLCGKKTVS-ISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLIAELWGSKV 274
Query: 591 ESVVCG 596
V CG
Sbjct: 275 SQVTCG 280
Score = 195 (73.7 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 51/147 (34%), Positives = 80/147 (54%)
Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
AD G++ +D P + L + +Q +CG ++ L+ G+++ G HGQLG
Sbjct: 92 ADDGKVLIMDQSTVCRP--LKSLENRQVIQIACGDQHSMALSNDGQLFVWGENTHGQLGL 149
Query: 519 PK--AKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQER 576
K A +S ++ L E V IS+G H VL+ G V+ WG N+ GQLGLGD+++R
Sbjct: 150 RKEQAGTQSPQHLQS-LCEIPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTKDR 208
Query: 577 ETPTFVEALRDRQVESVVCGSSITAAI 603
PT V++L ++ S+ CG TA +
Sbjct: 209 FVPTIVKSLCGKKTVSISCGGEHTATL 235
Score = 160 (61.4 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 49/156 (31%), Positives = 74/156 (47%)
Query: 227 GVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCW 286
GV+ G G G + T+ D +P +++S +IS G +H A ++K G VF +
Sbjct: 187 GVVFG-WGSNSAGQLGLGDTK-DRFVPTIVKSLCGKKTVSISCGGEHTATLSKGGTVFTF 244
Query: 287 GEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGE-IYTWGHNNHGA 345
G G G+LGH D P+L+ L G V V+CG T +S + IY++G G
Sbjct: 245 GSGGFGQLGHNSLKDEHHPRLIAELWGSKVSQVTCGRHHTLVFEESSKLIYSFGCGMQGQ 304
Query: 346 DLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT 381
GE+ +S LP L + K+ GE H+
Sbjct: 305 LGNGEQVKQSVPLPVLLPTECTEFTMEKLITGEHHS 340
Score = 45 (20.9 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 17/78 (21%), Positives = 31/78 (39%)
Query: 369 VRVSKVACGEWHTAIVSTSG-QLFTYGDGTFGVLGHGN-----LQNVSQPKEVE--SLRG 420
V+ +V G W +S Q + G G + G L N +++E L+
Sbjct: 16 VKPEQVRHGNWGIKFCPSSAVQDISAGKSCIGFIREGKVSVLRLHNEDADEKLEPLQLQN 75
Query: 421 LKVKSVACGPWHTAAIVD 438
+++S+ CG + D
Sbjct: 76 ERIRSIVCGEAGAVLLAD 93
>RGD|1592835 [details] [associations]
symbol:Rcc1 "regulator of chromosome condensation 1"
species:10116 "Rattus norvegicus" [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=ISO] [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0000794 "condensed nuclear chromosome"
evidence=ISO] [GO:0003682 "chromatin binding" evidence=ISO]
[GO:0005087 "Ran guanyl-nucleotide exchange factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0007052 "mitotic spindle
organization" evidence=ISO] [GO:0007059 "chromosome segregation"
evidence=ISO] [GO:0007088 "regulation of mitosis" evidence=ISO]
[GO:0007090 "regulation of S phase of mitotic cell cycle"
evidence=ISO] [GO:0031492 "nucleosomal DNA binding" evidence=ISO]
[GO:0031965 "nuclear membrane" evidence=ISO] [GO:0042393 "histone
binding" evidence=ISO] [GO:0050790 "regulation of catalytic
activity" evidence=ISO] [GO:0051225 "spindle assembly"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO] RGD:1592835
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 EMBL:CH473968 KO:K11493 CTD:1104
HOVERGEN:HBG017712 EMBL:BC160834 IPI:IPI00896784
RefSeq:NP_001121661.1 UniGene:Rn.217123 SMR:B1H227 GeneID:682908
KEGG:rno:682908 NextBio:724000 Genevestigator:B1H227 Uniprot:B1H227
Length = 421
Score = 264 (98.0 bits), Expect = 9.3e-20, P = 9.3e-20
Identities = 116/409 (28%), Positives = 191/409 (46%)
Query: 229 LG-GDIGGAVDG-SVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCW 286
LG GD+G G SV + K AL+P LL+ DV G H +++ G+V+ +
Sbjct: 40 LGQGDVGQLGLGESVLERKKP--ALVP-LLQ-----DVVQAEAGGMHTVCLSQSGQVYSF 91
Query: 287 GEGKDGRLGHKVNMDVS--CPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG--HNN 342
G +G LG +++ S P VE + VQ VS G+ T ALT+ G ++ WG +N
Sbjct: 92 GCNDEGALGRDTSVEGSEMVPGKVELQEKV-VQ-VSAGDSHTAALTEDGRVFLWGSFRDN 149
Query: 343 HGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLG 402
+G + E +S +P ++ LD +V KVA G H +++T G L+T G G G LG
Sbjct: 150 NGVIGLLEPMKKS-MVPVQV--QLD-TQVVKVASGNDHLVMLTTDGDLYTLGCGEQGQLG 205
Query: 403 H--------GNLQNVSQ---PKEV----ESLRG-LKVKSVACGPWHTAAIVDIMVDRCKS 446
G Q + + P+ V RG ++ + CG + T AI
Sbjct: 206 RVPELFANRGGRQGLERLLVPRCVLLKSRGTRGRVRFQDAFCGAYFTFAI---------- 255
Query: 447 NAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDF--DFVQASCGRMLTVGLTGLGK 504
+ G ++ +G ++ +LG +P +T + +V S G+ TV + GK
Sbjct: 256 -SREGHVYGFGLSNYHQLGTPGTGSCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGK 314
Query: 505 VYTMGSAVHGQLG-NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKN 563
Y++G A +G+LG A+++SI + +L V ++ G+ ++ G V+ WG
Sbjct: 315 AYSLGRAEYGRLGLGEGAEEKSIPTLISRLP--VVSSVACGASVGYAVSKDGRVFAWGMG 372
Query: 564 ANGQLGLGDSQERETPTFV--EALRDRQVESVVCGSSITAAICLHKSIS 610
N QLG G + +P + + L +R+V +V G T + K+ S
Sbjct: 373 TNYQLGTGQEDDAWSPVEMTGKQLENREVLTVSSGGQHTVLLVKDKTQS 421
Score = 262 (97.3 bits), Expect = 1.6e-19, P = 1.6e-19
Identities = 104/351 (29%), Positives = 165/351 (47%)
Query: 273 HAALVTKEGEVFCWGEGKDGRLGHKVN-MDVSCPKLVECLSGINVQSVSCGEFQTCALTK 331
H + T+ G V G+G G+LG + ++ P LV L + VQ+ G T L++
Sbjct: 27 HRSHNTEPGLVLTLGQGDVGQLGLGESVLERKKPALVPLLQDV-VQA-EAGGMHTVCLSQ 84
Query: 332 SGEIYTWGHNNHGADLVGERRS--RSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQ 389
SG++Y++G N+ GA +G S S +P K+ + + +V +V+ G+ HTA ++ G+
Sbjct: 85 SGQVYSFGCNDEGA--LGRDTSVEGSEMVPGKV-ELQE--KVVQVSAGDSHTAALTEDGR 139
Query: 390 LFTYGD--GTFGVLGHGNLQNVSQ-PKEVESLRGLKVKSVACGPWHTAAIV---DIMVDR 443
+F +G GV+G S P +V+ +V VA G H + D+
Sbjct: 140 VFLWGSFRDNNGVIGLLEPMKKSMVPVQVQL--DTQVVKVASGNDHLVMLTTDGDLYTLG 197
Query: 444 CKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCV------TRLVDFDFVQASCGRMLTV 497
C G+L + R G ER L+P CV TR F A CG T
Sbjct: 198 CGEQ---GQLGRVPELFANRGGRQGLERLLVPRCVLLKSRGTR-GRVRFQDAFCGAYFTF 253
Query: 498 GLTGLGKVYTMGSAVHGQLGNPKAKD----RSITVVEGKLKEEFVKGISSGSYHVAVLTS 553
++ G VY G + + QLG P +++T + K +V G S G +H + S
Sbjct: 254 AISREGHVYGFGLSNYHQLGTPGTGSCFIPQNLTSFKNSTKS-WV-GFSGGQHHTVCMDS 311
Query: 554 GGSVYTWGKNANGQLGLGD-SQERETPTFVEALRDRQVESVVCGSSITAAI 603
G Y+ G+ G+LGLG+ ++E+ PT + L V SV CG+S+ A+
Sbjct: 312 EGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLP--VVSSVACGASVGYAV 360
Score = 212 (79.7 bits), Expect = 7.0e-14, P = 7.0e-14
Identities = 97/347 (27%), Positives = 146/347 (42%)
Query: 226 EGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFC 285
EG LG D +V+GS ++P +E + V +S G H A +T++G VF
Sbjct: 96 EGALGRDT--SVEGS---------EMVPGKVE--LQEKVVQVSAGDSHTAALTEDGRVFL 142
Query: 286 WGEGKD--GRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNH 343
WG +D G +G M S V+ V V+ G LT G++YT G
Sbjct: 143 WGSFRDNNGVIGLLEPMKKSMVP-VQVQLDTQVVKVASGNDHLVMLTTDGDLYTLGCGEQ 201
Query: 344 GA-----DLVGERRSRSHW----LPR----KLFDTLDGVRVSKVACGEWHTAIVSTSGQL 390
G +L R R +PR K T VR CG + T +S G +
Sbjct: 202 GQLGRVPELFANRGGRQGLERLLVPRCVLLKSRGTRGRVRFQDAFCGAYFTFAISREGHV 261
Query: 391 FTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKS---VACGPWHTAAIVDIMVDRCKSN 447
+ +G + LG + P+ + S + KS + G HT C +
Sbjct: 262 YGFGLSNYHQLGTPGTGSCFIPQNLTSFKN-STKSWVGFSGGQHHTV---------CMDS 311
Query: 448 AIGGKLFTWGDADKGRLGHVDG-ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVY 506
GK ++ G A+ GRLG +G E K +PT ++RL V +CG + ++ G+V+
Sbjct: 312 E--GKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPVVSSV--ACGASVGYAVSKDGRVF 367
Query: 507 TMGSAVHGQLGNPKAKDR-SITVVEGK-LKEEFVKGISSGSYHVAVL 551
G + QLG + D S + GK L+ V +SSG H +L
Sbjct: 368 AWGMGTNYQLGTGQEDDAWSPVEMTGKQLENREVLTVSSGGQHTVLL 414
Score = 176 (67.0 bits), Expect = 6.7e-10, P = 6.7e-10
Identities = 57/164 (34%), Positives = 81/164 (49%)
Query: 439 IMVDRCKSNAIGGKLFTWGDADKGRLGHVDG--ERKLLPTCVTRLVDFDFVQASCGRMLT 496
+ V N G + T G D G+LG + ERK P V L D VQA G M T
Sbjct: 23 VKVSHRSHNTEPGLVLTLGQGDVGQLGLGESVLERKK-PALVPLLQDV--VQAEAGGMHT 79
Query: 497 VGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLK-EEFVKGISSGSYHVAVLTSGG 555
V L+ G+VY+ G G LG + + S +V GK++ +E V +S+G H A LT G
Sbjct: 80 VCLSQSGQVYSFGCNDEGALGRDTSVEGS-EMVPGKVELQEKVVQVSAGDSHTAALTEDG 138
Query: 556 SVYTWG--KNANGQLGLGDSQERETPTFVEALRDRQVESVVCGS 597
V+ WG ++ NG +GL + ++ V+ D QV V G+
Sbjct: 139 RVFLWGSFRDNNGVIGLLEPMKKSMVP-VQVQLDTQVVKVASGN 181
>UNIPROTKB|Q9P258 [details] [associations]
symbol:RCC2 "Protein RCC2" species:9606 "Homo sapiens"
[GO:0005874 "microtubule" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0000775 "chromosome, centromeric region"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005819
"spindle" evidence=IEA] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005829 Reactome:REACT_115566 Reactome:REACT_21300
GO:GO:0000775 GO:GO:0005730 GO:GO:0051301 GO:GO:0005819
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005874
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GO:GO:0000236 CTD:55920 HOGENOM:HOG000232061
HOVERGEN:HBG080538 OMA:FGENKLG OrthoDB:EOG4DNF4B EMBL:AJ421269
EMBL:AB040903 EMBL:BC004933 EMBL:BC042141 EMBL:BC053908
EMBL:AL359612 IPI:IPI00465044 PIR:T50630 RefSeq:NP_001129676.1
RefSeq:NP_061185.1 UniGene:Hs.380857 ProteinModelPortal:Q9P258
SMR:Q9P258 IntAct:Q9P258 STRING:Q9P258 PhosphoSite:Q9P258
DMDM:71152033 SWISS-2DPAGE:Q9P258 PaxDb:Q9P258 PeptideAtlas:Q9P258
PRIDE:Q9P258 Ensembl:ENST00000375433 Ensembl:ENST00000375436
GeneID:55920 KEGG:hsa:55920 UCSC:uc001bal.3 GeneCards:GC01M017733
HGNC:HGNC:30297 MIM:609587 neXtProt:NX_Q9P258 PharmGKB:PA142671091
InParanoid:Q9P258 GenomeRNAi:55920 NextBio:61323 Bgee:Q9P258
CleanEx:HS_RCC2 Genevestigator:Q9P258 GermOnline:ENSG00000179051
Uniprot:Q9P258
Length = 522
Score = 266 (98.7 bits), Expect = 1.4e-19, P = 1.4e-19
Identities = 88/354 (24%), Positives = 156/354 (44%)
Query: 271 AKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALT 330
A H+ L+T EG+++ WG + G+LGH V P+L+E LS + S +CG T ALT
Sbjct: 159 AAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALT 218
Query: 331 KSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQL 390
++G ++ +G N G +G + +P +G ++K+ACG + I+ G L
Sbjct: 219 ETGSVFAFGENKMGQLGLGNQTDA---VPSPAQIMYNGQPITKMACGAEFSMIMDCKGNL 275
Query: 391 FTYGDGTFGVLGHGN-------LQNVSQPKEVESLR-GLKVKSVACG---PWHTAAIVDI 439
+++G +G LGH + Q + E+ R + ++ G P + D+
Sbjct: 276 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 335
Query: 440 MVDRCKSNAIGG--KLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTV 497
+ + ++F+WG GRLGH + + +++P V +L DF AS +
Sbjct: 336 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLV-KLFDFPGRGAS---QIYA 391
Query: 498 GLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSV 557
G T V +G N + L ++ ++ G + ++ + S
Sbjct: 392 GYTCSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSI-IVAADEST 450
Query: 558 YTWGKNAN-GQLGLGDSQERETPTF--VEALRDRQVESVVCGSSITAAICLHKS 608
+WG + G+LG GD + + + V+ L E V G S + I +S
Sbjct: 451 ISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVIARDES 504
Score = 198 (74.8 bits), Expect = 4.2e-12, P = 4.2e-12
Identities = 93/353 (26%), Positives = 157/353 (44%)
Query: 305 PKLVECLSGINVQSVSCGEFQTCAL--TKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL 362
P CL+G+ V++V G +L T G++++WG N G +G ++ PR L
Sbjct: 139 PHRYGCLAGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQ--LGHGDTKRVEAPR-L 195
Query: 363 FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN-VSQPKEVESLRGL 421
+ L + ACG HT ++ +G +F +G+ G LG GN + V P ++ G
Sbjct: 196 IEGLSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTDAVPSPAQI-MYNGQ 254
Query: 422 KVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGH-VDG------ER--- 471
+ +ACG A +++D CK N L+++G + G+LGH DG +R
Sbjct: 255 PITKMACG-----AEFSMIMD-CKGN-----LYSFGCPEYGQLGHNSDGKFIARAQRIEY 303
Query: 472 --KLLPTCVTRLV----DFDFV--------QASCGRMLTVGLTGLGKVYTMGSAVHGQLG 517
+L+P V + D + +CG T+ L +V++ G +G+LG
Sbjct: 304 DCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLG 363
Query: 518 NPKAKDRSITVVEGKLKEEFVKGISS--GSYHVAVLTSG-GSVYTWGKNANGQLGLGDSQ 574
+ + KD + + KL + +G S Y + S G ++ WG +
Sbjct: 364 HAEQKDEMVPRLV-KLFDFPGRGASQIYAGYTCSFAVSEVGGLFFWGAT---------NT 413
Query: 575 ERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVG-DQSSCSQCRMP-FG 625
RE+ + +A++D +CG I + C SI V D+S+ S P FG
Sbjct: 414 SRESTMYPKAVQD------LCGWRIRSLACGKSSIIVAADESTISWGPSPTFG 460
Score = 183 (69.5 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 54/178 (30%), Positives = 89/178 (50%)
Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS--GINVQSVSC 321
V++++ GA H ++ + VF WG G GRLGH D P+LV+ G +
Sbjct: 332 VRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIYA 391
Query: 322 GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT 381
G + A+++ G ++ WG N R S + P+ + D L G R+ +ACG+ +
Sbjct: 392 GYTCSFAVSEVGGLFFWGATNTS------RESTMY--PKAVQD-LCGWRIRSLACGK-SS 441
Query: 382 AIVSTSGQLFTYGDG-TFGVLGHGNLQNVSQP--KEVESLRGLKVKSVACGPWHTAAI 436
IV+ ++G TFG LG+G+ + S +EV++L G+ + VA G H+ I
Sbjct: 442 IIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVI 499
Score = 168 (64.2 bits), Expect = 7.8e-09, P = 7.8e-09
Identities = 54/193 (27%), Positives = 90/193 (46%)
Query: 388 GQLFTYGDGTFGVLG----------HGNL-QNVSQPKEVESLRGLKVKSVACGPWHTAAI 436
GQL +G + ++G + NL QN+ P L G++V++V G + A
Sbjct: 104 GQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLAGVRVRTVVSG---SCAA 160
Query: 437 VDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLT 496
+++ GKL++WG +KG+LGH D +R P + L V A+CGR T
Sbjct: 161 HSLLI------TTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHT 214
Query: 497 VGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGS 556
+ LT G V+ G GQLG D + + + + ++ G+ ++ G+
Sbjct: 215 LALTETGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPITKMACGAEFSMIMDCKGN 274
Query: 557 VYTWGKNANGQLG 569
+Y++G GQLG
Sbjct: 275 LYSFGCPEYGQLG 287
Score = 38 (18.4 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 14/43 (32%), Positives = 20/43 (46%)
Query: 1 MDEKFLIWYSGQKEK-QLRLNSVTKIIMGQRTVNFQCQPQPDR 42
MD K ++ G E QL NS K I + + + C+ P R
Sbjct: 269 MDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRR 311
>UNIPROTKB|F1NAG9 [details] [associations]
symbol:NEK9 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0019901 "protein kinase binding"
evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 GeneTree:ENSGT00700000104074
OMA:GCDGTFL EMBL:AADN02003466 IPI:IPI00598995
Ensembl:ENSGALT00000016792 Uniprot:F1NAG9
Length = 984
Score = 270 (100.1 bits), Expect = 2.1e-19, P = 2.1e-19
Identities = 87/317 (27%), Positives = 143/317 (45%)
Query: 265 QNISLGAKHAALVTKEGEVFCW-----GEGKDGRLGHKVNMDVSCPKLVECLSGINVQSV 319
+ + G H A+VT E E++ W G G+LGH PK VE L G ++ V
Sbjct: 382 RQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDRASYRQPKHVEKLQGKAIRQV 441
Query: 320 SCGEFQTCALTKSGEIYTWGHNNHGADLVG-ERRSRSHWLPRKLFDTLDGVRVSKVACGE 378
SCG+ T +T G++Y +G + +G +G ++ S L D V +V+CG+
Sbjct: 442 SCGDDFTVCITDEGQLYAFGSDYYGC--IGIDKAYGSEVLEPLQLDFFLTNPVEQVSCGD 499
Query: 379 WHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVD 438
H A+++ + +++T+G G +G LG + ++ P++V+ + L + SV CG T +
Sbjct: 500 NHVAVLTRNREVYTWGCGEYGRLGLDSEEDHYTPQKVDVPKTLNIVSVHCGCDGTFLLTQ 559
Query: 439 I-MVDRC---KSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRM 494
V C + N +G T G + V L T +L + S G+
Sbjct: 560 TGKVLACGLNEFNKLGLNQCTSGIINHDTYCEVPYATSL--TLAKQLSFYKIRTISPGKT 617
Query: 495 LTVGLTGLGKVYTMGSAVHGQLG-NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTS 553
T + G++ T GS GQLG K I ++ G L + V +S G T
Sbjct: 618 HTASIDERGRLLTFGSNKCGQLGVGDYKKHLGINLLAGPLGGKQVIRVSCGDEFTIAATD 677
Query: 554 GGSVYTWGKNANGQLGL 570
++ WG NG+L +
Sbjct: 678 DNHIFAWGNGGNGRLAM 694
Score = 253 (94.1 bits), Expect = 1.4e-17, P = 1.4e-17
Identities = 92/349 (26%), Positives = 148/349 (42%)
Query: 274 AALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECL-SGINVQSVSCGEFQTCALTKS 332
A + ++ EV+ WG GK S P+ ++ + SG + + V G +T
Sbjct: 350 AVVTSRTSEVYVWGGGK------------STPQKLDAIKSGCSARQVCAGNTHFAVVTVE 397
Query: 333 GEIYTWGHNNHGADLVGE--RRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQL 390
E+YTW + G L G+ R+ + K + L G + +V+CG+ T ++ GQL
Sbjct: 398 KELYTWVNMQGGTKLHGQLGHGDRASYRQPKHVEKLQGKAIRQVSCGDDFTVCITDEGQL 457
Query: 391 FTYGDGTFGVLGHGNL--QNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNA 448
+ +G +G +G V +P +++ V+ V+CG H A + +R
Sbjct: 458 YAFGSDYYGCIGIDKAYGSEVLEPLQLDFFLTNPVEQVSCGDNHVAVLTR---NR----- 509
Query: 449 IGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTM 508
+++TWG + GRLG E P V + V CG T LT GKV
Sbjct: 510 ---EVYTWGCGEYGRLGLDSEEDHYTPQKVDVPKTLNIVSVHCGCDGTFLLTQTGKVLAC 566
Query: 509 GSAVHGQLGNPKAKD--------------RSITVVEGKLKEEFVKGISSGSYHVAVLTSG 554
G +LG + S+T+ + +L ++ IS G H A +
Sbjct: 567 GLNEFNKLGLNQCTSGIINHDTYCEVPYATSLTLAK-QLSFYKIRTISPGKTHTASIDER 625
Query: 555 GSVYTWGKNANGQLGLGDSQERETPTFVEA-LRDRQVESVVCGSSITAA 602
G + T+G N GQLG+GD ++ + L +QV V CG T A
Sbjct: 626 GRLLTFGSNKCGQLGVGDYKKHLGINLLAGPLGGKQVIRVSCGDEFTIA 674
Score = 197 (74.4 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 76/263 (28%), Positives = 115/263 (43%)
Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALL-PKLLESAVMLDVQNISLGAKHAALVTK 279
V I EG L G G + +K +L P L+ + V+ +S G H A++T+
Sbjct: 449 VCITDEGQLYA-FGSDYYGCIGIDKAYGSEVLEPLQLDFFLTNPVEQVSCGDNHVAVLTR 507
Query: 280 EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
EV+ WG G+ GRLG D P+ V+ +N+ SV CG T LT++G++ G
Sbjct: 508 NREVYTWGCGEYGRLGLDSEEDHYTPQKVDVPKTLNIVSVHCGCDGTFLLTQTGKVLACG 567
Query: 340 HNNHGADLVGERRSR--SH----WLPRK----LFDTLDGVRVSKVACGEWHTAIVSTSGQ 389
N + + S +H +P L L ++ ++ G+ HTA + G+
Sbjct: 568 LNEFNKLGLNQCTSGIINHDTYCEVPYATSLTLAKQLSFYKIRTISPGKTHTASIDERGR 627
Query: 390 LFTYGDGTFGVLGHGNLQ-NVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNA 448
L T+G G LG G+ + ++ L G +V V+CG T A D N
Sbjct: 628 LLTFGSNKCGQLGVGDYKKHLGINLLAGPLGGKQVIRVSCGDEFTIAATD-------DNH 680
Query: 449 IGGKLFTWGDADKGRLGHVDGER 471
I F WG+ GRL ER
Sbjct: 681 I----FAWGNGGNGRLAMTPTER 699
Score = 191 (72.3 bits), Expect = 6.7e-11, P = 6.7e-11
Identities = 69/280 (24%), Positives = 125/280 (44%)
Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG-HKV-NMDVSCPKLVEC 310
PK +E ++ +S G +T EG+++ +G G +G K +V P ++
Sbjct: 427 PKHVEKLQGKAIRQVSCGDDFTVCITDEGQLYAFGSDYYGCIGIDKAYGSEVLEPLQLDF 486
Query: 311 LSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR 370
V+ VSCG+ LT++ E+YTWG +G +G H+ P+K+ D +
Sbjct: 487 FLTNPVEQVSCGDNHVAVLTRNREVYTWGCGEYGR--LGLDSEEDHYTPQKV-DVPKTLN 543
Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTF----------GVLGHGNLQNVSQPKEVESLRG 420
+ V CG T +++ +G++ G F G++ H V + +
Sbjct: 544 IVSVHCGCDGTFLLTQTGKVLACGLNEFNKLGLNQCTSGIINHDTYCEVPYATSLTLAKQ 603
Query: 421 L---KVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL-LPT 476
L K+++++ G HTA+I D +R G+L T+G G+LG D ++ L +
Sbjct: 604 LSFYKIRTISPGKTHTASI-D---ER-------GRLLTFGSNKCGQLGVGDYKKHLGINL 652
Query: 477 CVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
L ++ SCG T+ T ++ G+ +G+L
Sbjct: 653 LAGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRL 692
Score = 128 (50.1 bits), Expect = 0.00040, P = 0.00040
Identities = 42/154 (27%), Positives = 75/154 (48%)
Query: 307 LVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTL 366
L + LS ++++S G+ T ++ + G + T+G N G VG+ + H L L
Sbjct: 600 LAKQLSFYKIRTISPGKTHTASIDERGRLLTFGSNKCGQLGVGDYKK--HLGINLLAGPL 657
Query: 367 DGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLG-------HGNLQNVSQPKEV-ESL 418
G +V +V+CG+ T + +F +G+G G L HG+ S P+ + SL
Sbjct: 658 GGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERAHGSDICTSWPRPIFGSL 717
Query: 419 RGLKVKSVACGPWHTAAIVDIMVDR--CKSNAIG 450
V ++C WHT +V+ +++ +SN+ G
Sbjct: 718 H--HVPDLSCRGWHTIIVVEKVLNSKTIRSNSSG 749
>TAIR|locus:2092190 [details] [associations]
symbol:AT3G26100 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002686
EMBL:AB023041 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 HSSP:P18754
EMBL:AK230272 IPI:IPI00540426 RefSeq:NP_974362.1 UniGene:At.25510
UniGene:At.69016 ProteinModelPortal:Q9LU80 SMR:Q9LU80 STRING:Q9LU80
PRIDE:Q9LU80 EnsemblPlants:AT3G26100.2 GeneID:822208
KEGG:ath:AT3G26100 TAIR:At3g26100 HOGENOM:HOG000070923
InParanoid:Q9LU80 OMA:LACQPNG PhylomeDB:Q9LU80
ProtClustDB:CLSN2688790 Genevestigator:Q9LU80 Uniprot:Q9LU80
Length = 532
Score = 264 (98.0 bits), Expect = 2.6e-19, P = 2.6e-19
Identities = 94/302 (31%), Positives = 141/302 (46%)
Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM-DVSCPKLVECL 311
P+L+ S + V ++G A++++EG+V+ + G DGRLGH+ DV L+ L
Sbjct: 240 PQLVTSLKNIFVVQAAIGNYFTAVLSREGKVYTFSWGNDGRLGHQTEAADVEPRPLLGPL 299
Query: 312 SGINVQSVSCGEFQTCALT--KSG-EIYTWGHNNHGADLVGERRSRSHWLPRKL--FDTL 366
+ V ++ G AL +G +Y+ G G G R + PR + F L
Sbjct: 300 ENVPVVQIAAGYCYLLALACQPNGMSVYSVGCGLGGKLGHGSRTDEKY--PRVIEQFQIL 357
Query: 367 DGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSV 426
+ ++ VA G WH A+V G++ T+G G +G LGHGN + S PK VE L +K V
Sbjct: 358 N-LQPRVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVEGLSHVKAVHV 416
Query: 427 ACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGH---VD--GERK---LLPTCV 478
A G + T + D G ++++G + LGH D G R L PT V
Sbjct: 417 ATGDYTTFVVSD-----------DGDVYSFGCGESASLGHHPSFDEQGNRHANVLSPTVV 465
Query: 479 TRL--VDFDFVQASCGRML-----TVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEG 531
T L V+ VQ S + T LT GK++ G+ GQLG K++ V
Sbjct: 466 TSLKQVNERMVQISLTNSIYWNAHTFALTESGKLFAFGAGDQGQLGTELGKNQKERCVPE 525
Query: 532 KL 533
K+
Sbjct: 526 KV 527
Score = 264 (98.0 bits), Expect = 2.6e-19, P = 2.6e-19
Identities = 97/353 (27%), Positives = 161/353 (45%)
Query: 239 GSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRL--GH 296
G + T+ +A + + S + + + GA L++ +G+V+ G+ G G
Sbjct: 173 GQLGHGHTEDEARIQPV-RSLQGVRIIQAAAGAARTMLISDDGKVYACGKESFGEAEYGG 231
Query: 297 KVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSH 356
+ V+ P+LV L I V + G + T L++ G++YT+ N G +G + +
Sbjct: 232 QGTKPVTTPQLVTSLKNIFVVQAAIGNYFTAVLSREGKVYTFSWGNDGR--LGHQTEAAD 289
Query: 357 WLPRKLFDTLDGVRVSKVACGEWHTAIVST--SGQ-LFTYGDGTFGVLGHGNLQNVSQPK 413
PR L L+ V V ++A G + ++ +G +++ G G G LGHG+ + P+
Sbjct: 290 VEPRPLLGPLENVPVVQIAAGYCYLLALACQPNGMSVYSVGCGLGGKLGHGSRTDEKYPR 349
Query: 414 EVESLR--GLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGER 471
+E + L+ + VA G WH AA+V D G++ TWG G LGH + E
Sbjct: 350 VIEQFQILNLQPRVVAAGAWH-AAVVG--QD--------GRVCTWGWGRYGCLGHGNEEC 398
Query: 472 KLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMG---SAVHG------QLGNPKAK 522
+ +P V L V + G T ++ G VY+ G SA G + GN A
Sbjct: 399 ESVPKVVEGLSHVKAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHHPSFDEQGNRHAN 458
Query: 523 DRSITVVEG--KLKEEFVK-GISSGSY---HVAVLTSGGSVYTWGKNANGQLG 569
S TVV ++ E V+ +++ Y H LT G ++ +G GQLG
Sbjct: 459 VLSPTVVTSLKQVNERMVQISLTNSIYWNAHTFALTESGKLFAFGAGDQGQLG 511
Score = 253 (94.1 bits), Expect = 4.2e-18, P = 4.2e-18
Identities = 90/348 (25%), Positives = 158/348 (45%)
Query: 270 GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCAL 329
G H+ VT +GEV+ +G G+LGH D + + V L G+ + + G +T +
Sbjct: 151 GPGHSVAVTSKGEVYTFGYNNSGQLGHGHTEDEARIQPVRSLQGVRIIQAAAGAARTMLI 210
Query: 330 TKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQ 389
+ G++Y G + G G + ++ P+ L +L + V + A G + TA++S G+
Sbjct: 211 SDDGKVYACGKESFGEAEYGGQGTKPVTTPQ-LVTSLKNIFVVQAAIGNYFTAVLSREGK 269
Query: 390 LFTYGDGTFGVLGHGNLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCKSNA 448
++T+ G G LGH +P+ + L + V +A G + A+ C+ N
Sbjct: 270 VYTFSWGNDGRLGHQTEAADVEPRPLLGPLENVPVVQIAAGYCYLLALA------CQPN- 322
Query: 449 IGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF----VQASCGRMLTVGLTGLGK 504
G +++ G G+LGH + P + + + V A VG G +
Sbjct: 323 -GMSVYSVGCGLGGKLGHGSRTDEKYPRVIEQFQILNLQPRVVAAGAWHAAVVGQDG--R 379
Query: 505 VYTMGSAVHGQLGNPKAKDRSIT-VVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKN 563
V T G +G LG+ + S+ VVEG + V +++G Y V++ G VY++G
Sbjct: 380 VCTWGWGRYGCLGHGNEECESVPKVVEGLSHVKAVH-VATGDYTTFVVSDDGDVYSFGCG 438
Query: 564 ANGQLGLGDSQERE--------TPTFVEALRDRQVESVVCGSSITAAI 603
+ LG S + + +PT V +L+ QV + S+T +I
Sbjct: 439 ESASLGHHPSFDEQGNRHANVLSPTVVTSLK--QVNERMVQISLTNSI 484
Score = 212 (79.7 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 71/237 (29%), Positives = 116/237 (48%)
Query: 372 SKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPW 431
S+ G H+ V++ G+++T+G G LGHG+ ++ ++ + V SL+G+++ A G
Sbjct: 146 SQAVAGPGHSVAVTSKGEVYTFGYNNSGQLGHGHTEDEARIQPVRSLQGVRIIQAAAGAA 205
Query: 432 HTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASC 491
T I D D K A G + F G+A+ G G + P VT L + VQA+
Sbjct: 206 RTMLISD---DG-KVYACGKESF--GEAEYGGQGT---KPVTTPQLVTSLKNIFVVQAAI 256
Query: 492 GRMLTVGLTGLGKVYTMGSAVHGQLGNP-KAKDRSITVVEGKLKEEFVKGISSGSYHVAV 550
G T L+ GKVYT G+LG+ +A D + G L+ V I++G ++
Sbjct: 257 GNYFTAVLSREGKVYTFSWGNDGRLGHQTEAADVEPRPLLGPLENVPVVQIAAGYCYLLA 316
Query: 551 LT---SGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVES-VVCGSSITAAI 603
L +G SVY+ G G+LG G + + P +E + ++ VV + AA+
Sbjct: 317 LACQPNGMSVYSVGCGLGGKLGHGSRTDEKYPRVIEQFQILNLQPRVVAAGAWHAAV 373
>DICTYBASE|DDB_G0282633 [details] [associations]
symbol:DDB_G0282633 "putative guanine nucleotide
exchange factor (GEF)" species:44689 "Dictyostelium discoideum"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088 PROSITE:PS50097
SMART:SM00225 SMART:SM00248 dictyBase:DDB_G0282633
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AAFI02000047 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
RefSeq:XP_640165.2 ProteinModelPortal:Q54S74
EnsemblProtists:DDB0234270 GeneID:8623703 KEGG:ddi:DDB_G0282633
OMA:RLAYLCN ProtClustDB:CLSZ2501699 Uniprot:Q54S74
Length = 919
Score = 268 (99.4 bits), Expect = 3.0e-19, P = 3.0e-19
Identities = 109/410 (26%), Positives = 180/410 (43%)
Query: 237 VDGSVSQNKTQVDALLPKLLESAVMLDVQNI--SLGAKHAALVTKEG-EVFCWGEGKDGR 293
VDGS+ N+ L+ AVM+D + I L +++T E ++ WG+
Sbjct: 122 VDGSLKDNRNMT------ALDIAVMMDHKTIIKELKKLKTSMMTMEQTSIYQWGQILTSS 175
Query: 294 LGHKVNMDVSCPKLVECLSGINVQS---VSCGEFQTCALTKSGEIYTWGHNNHGADLVGE 350
L K SC K L + + G+ LT +G +Y+ G ++G G
Sbjct: 176 LTLK-----SCAKATNMLFNDEISAPIQTEFGQNYNLILTDTGAVYSSGLCSYGK--TGH 228
Query: 351 RRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGN-LQNV 409
++ R +P ++ + L R+ +ACG H+ + GQ++++G+G G LG GN V
Sbjct: 229 KKKRDVLIPTQILE-LSNKRIKSIACGTHHSLAMDDLGQVYSWGNGASGRLGLGNDFSIV 287
Query: 410 SQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDG 469
P + + +A A + M+ SN G ++++G +LG+ +
Sbjct: 288 PTPTLISVINRFGSNEIATAI--AAGCDNSMI--LGSN---GDVYSFGSNLHYKLGYKEC 340
Query: 470 ERKL----LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAK--- 522
+ L P + ++ + +C +V L G+VYT GS+ +G+LG +
Sbjct: 341 DGALGFQSTPKKIPSILQMKSI--ACASWHSVFLDLKGRVYTCGSSTNGRLGRAISSYSS 398
Query: 523 ---DR-SIT--VVEGKL-KEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGL----G 571
+R SIT G L +EE +K I+ G+ VL+ GS+Y+WG N QLGL G
Sbjct: 399 FYPERVSITNSKTNGTLPQEEVIKQIACGTNFTTVLSESGSLYSWGVNTKSQLGLINLVG 458
Query: 572 DSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSI-SVGDQSSCSQC 620
S+ P V AL + S G A+ + GD S+ QC
Sbjct: 459 ISEYYSQPKLVTALNPYTIHSFAVGDQHVVALSDQGEVFCYGDNSTL-QC 507
Score = 241 (89.9 bits), Expect = 2.5e-16, P = 2.5e-16
Identities = 87/341 (25%), Positives = 150/341 (43%)
Query: 255 LLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGI 314
L + +Q G + ++T G V+ G G+ GHK DV P + LS
Sbjct: 188 LFNDEISAPIQT-EFGQNYNLILTDTGAVYSSGLCSYGKTGHKKKRDVLIPTQILELSNK 246
Query: 315 NVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRK-LFDTLD--GVR- 370
++S++CG + A+ G++Y+WG+ G +G S +P L ++ G
Sbjct: 247 RIKSIACGTHHSLAMDDLGQVYSWGNGASGRLGLGNDFSI---VPTPTLISVINRFGSNE 303
Query: 371 -VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGH----GNLQNVSQPKEVESLRGLKVKS 425
+ +A G ++ I+ ++G ++++G LG+ G L S PK++ S+ L++KS
Sbjct: 304 IATAIAAGCDNSMILGSNGDVYSFGSNLHYKLGYKECDGALGFQSTPKKIPSI--LQMKS 361
Query: 426 VACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDG-------ERKLLPTCV 478
+AC WH+ + +D + G+++T G + GRLG ER +
Sbjct: 362 IACASWHS-----VFLD------LKGRVYTCGSSTNGRLGRAISSYSSFYPERVSITNSK 410
Query: 479 TR--LVDFDFV-QASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKE 535
T L + + Q +CG T L+ G +Y+ G QLG S + KL
Sbjct: 411 TNGTLPQEEVIKQIACGTNFTTVLSESGSLYSWGVNTKSQLGLINLVGISEYYSQPKLVT 470
Query: 536 EF----VKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGD 572
+ + G HV L+ G V+ +G N+ Q G G+
Sbjct: 471 ALNPYTIHSFAVGDQHVVALSDQGEVFCYGDNSTLQCGFGE 511
Score = 201 (75.8 bits), Expect = 5.1e-12, P = 5.1e-12
Identities = 82/338 (24%), Positives = 146/338 (43%)
Query: 244 NKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMD-V 302
+K + D L+P + +++I+ G H+ + G+V+ WG G GRLG + V
Sbjct: 228 HKKKRDVLIPTQILELSNKRIKSIACGTHHSLAMDDLGQVYSWGNGASGRLGLGNDFSIV 287
Query: 303 SCPKLVECLS--GIN--VQSVSCGEFQTCALTKSGEIYTWGHNNH---G-ADLVGERRSR 354
P L+ ++ G N +++ G + L +G++Y++G N H G + G +
Sbjct: 288 PTPTLISVINRFGSNEIATAIAAGCDNSMILGSNGDVYSFGSNLHYKLGYKECDGALGFQ 347
Query: 355 SHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQ--P 412
S P+K+ L ++ +AC WH+ + G+++T G T G LG + + S P
Sbjct: 348 S--TPKKIPSIL---QMKSIACASWHSVFLDLKGRVYTCGSSTNGRLGRA-ISSYSSFYP 401
Query: 413 KEVESLRGLK----------VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKG 462
+ V S+ K +K +ACG T + + G L++WG K
Sbjct: 402 ERV-SITNSKTNGTLPQEEVIKQIACGTNFTTVLSE-----------SGSLYSWGVNTKS 449
Query: 463 RLGHVD----GERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
+LG ++ E P VT L + + G V L+ G+V+ G Q G
Sbjct: 450 QLGLINLVGISEYYSQPKLVTALNPYTIHSFAVGDQHVVALSDQGEVFCYGDNSTLQCGF 509
Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGS 556
+ + I + + K++ G V +++GGS
Sbjct: 510 GEVLNFEINLTKVKIETTSSDAPIIGGGGVFKVSAGGS 547
>UNIPROTKB|E1BX75 [details] [associations]
symbol:ALS2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005543 "phospholipid binding" evidence=IEA]
[GO:0001662 "behavioral fear response" evidence=IEA] [GO:0001726
"ruffle" evidence=IEA] [GO:0001881 "receptor recycling"
evidence=IEA] [GO:0005769 "early endosome" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0007626 "locomotory behavior" evidence=IEA]
[GO:0008104 "protein localization" evidence=IEA] [GO:0014069
"postsynaptic density" evidence=IEA] [GO:0016050 "vesicle
organization" evidence=IEA] [GO:0016197 "endosomal transport"
evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange factor
activity" evidence=IEA] [GO:0017137 "Rab GTPase binding"
evidence=IEA] [GO:0030027 "lamellipodium" evidence=IEA] [GO:0030676
"Rac guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0031982 "vesicle" evidence=IEA] [GO:0032313 "regulation of Rab
GTPase activity" evidence=IEA] [GO:0032855 "positive regulation of
Rac GTPase activity" evidence=IEA] [GO:0035249 "synaptic
transmission, glutamatergic" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0043234 "protein
complex" evidence=IEA] [GO:0043539 "protein serine/threonine kinase
activator activity" evidence=IEA] [GO:0048812 "neuron projection
morphogenesis" evidence=IEA] [GO:0051036 "regulation of endosome
size" evidence=IEA] InterPro:IPR000219 InterPro:IPR001849
Pfam:PF00621 PROSITE:PS50003 PROSITE:PS50010 SMART:SM00233
INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204 GO:GO:0005829
GO:GO:0005813 GO:GO:0043234 GO:GO:0014069 GO:GO:0008104
GO:GO:0006979 GO:GO:0005543 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0043539 GO:GO:0016197 Gene3D:1.20.900.10 SUPFAM:SSF48065
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493 SMART:SM00698
PROSITE:PS51205 GeneTree:ENSGT00600000084242 OMA:AKPAIDF
GO:GO:0005769 GO:GO:0017112 GO:GO:0030676 GO:GO:0032855
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:AADN02019863
IPI:IPI00580588 Ensembl:ENSGALT00000013707 Uniprot:E1BX75
Length = 1651
Score = 222 (83.2 bits), Expect = 4.8e-19, Sum P(2) = 4.8e-19
Identities = 61/196 (31%), Positives = 101/196 (51%)
Query: 250 ALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVE 309
++ P+ L V +LG H L+T+ GEV+ +G+ R G + + P L
Sbjct: 29 SVTPERLPGLCGKTVLQAALGTNHGLLLTEGGEVYSFGK-LPWRSGPE-EFCANSPILEN 86
Query: 310 CLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDT---- 365
L G +V +V+ G F A+T+ G +Y WG+N+ G V + P + D+
Sbjct: 87 TLLGQHVITVAAGSFHNGAVTEGGVVYMWGNNSSGQCAVANQPYVPEPQPISISDSETSP 146
Query: 366 LDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT-FGVLGHGNLQNVSQPKEVESLRGLKVK 424
L VRV ++ACGE HT +S S +++ +G G G++ V++P++VE L G V
Sbjct: 147 LLSVRVLQLACGEEHTLALSLSREIWAWGSGCQLGLIT--TTFPVTKPQKVEHLAGRVVL 204
Query: 425 SVACGPWHTAAIVDIM 440
+ACG +H+ A+V +
Sbjct: 205 QIACGAYHSLALVQCL 220
Score = 104 (41.7 bits), Expect = 4.8e-19, Sum P(2) = 4.8e-19
Identities = 35/105 (33%), Positives = 54/105 (51%)
Query: 504 KVYTMGSAVHGQLGN----PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYT 559
+V++ G GQLG+ P+ + + ++GK E ++ +S+G +H LT+ VY+
Sbjct: 522 EVWSWGRGKDGQLGHGDVLPRLQPLCVKSLDGK---EVIQ-LSAGGHHSLALTAKSQVYS 577
Query: 560 WGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSI--TAA 602
WG N GQLG +S PT V L + VCG + TAA
Sbjct: 578 WGSNIFGQLGHTNS-----PTTVPRL------AKVCGDGVWSTAA 611
Score = 75 (31.5 bits), Expect = 5.1e-16, Sum P(2) = 5.1e-16
Identities = 16/47 (34%), Positives = 27/47 (57%)
Query: 557 VYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
V++WG+ +GQLG GD R P V++L ++V + G + A+
Sbjct: 523 VWSWGRGKDGQLGHGDVLPRLQPLCVKSLDGKEVIQLSAGGHHSLAL 569
>TAIR|locus:2156233 [details] [associations]
symbol:RUG2 "RCC1/UVR8/GEF-like 2" species:3702
"Arabidopsis thaliana" [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0008150 "biological_process" evidence=ND] INTERPRO:IPR000408
Pfam:PF00415 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
HSSP:P18754 EMBL:BT005508 EMBL:AK117526 IPI:IPI00527447
RefSeq:NP_199644.2 UniGene:At.29855 ProteinModelPortal:Q8GYL6
SMR:Q8GYL6 PRIDE:Q8GYL6 EnsemblPlants:AT5G48330.1 GeneID:834886
KEGG:ath:AT5G48330 TAIR:At5g48330 HOGENOM:HOG000238877
InParanoid:Q8GYL6 OMA:SAGHYHS PhylomeDB:Q8GYL6
ProtClustDB:CLSN2680477 ArrayExpress:Q8GYL6 Genevestigator:Q8GYL6
Uniprot:Q8GYL6
Length = 455
Score = 185 (70.2 bits), Expect = 6.3e-19, Sum P(2) = 6.3e-19
Identities = 58/191 (30%), Positives = 95/191 (49%)
Query: 219 KDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVT 278
+ VM +G+G LG +G + S S +DA P ++ S + D+ +IS G H+ VT
Sbjct: 44 RTVMSFGDGNLGA-LGLS---SSSIPGMGMDAYEPTVV-SNLPSDISSISAGHYHSLAVT 98
Query: 279 KEGEVFCWGEGKDGRLGHKV---NMDV-SCPKLVECLSGINVQSVSCGEFQTCALTKSGE 334
GE++ WG +G+LG V + D S PK VE L +NVQ+ + A+ G
Sbjct: 99 SSGEIWAWGRNDEGQLGRIVIDSSRDSRSEPKRVEGLENVNVQAAFASGVVSAAIGDDGS 158
Query: 335 IYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYG 394
++ WG + G +G + +P ++ + L V KV+ G H ++ G++F +G
Sbjct: 159 LWVWGRSKRGQLGLGNGIIEAR-VPSRV-ENLAAEHVVKVSLGWGHALALTVDGKVFGWG 216
Query: 395 ---DGTFGVLG 402
DG G +G
Sbjct: 217 YVADGRVGNVG 227
Score = 156 (60.0 bits), Expect = 6.2e-07, Sum P(2) = 6.2e-07
Identities = 56/200 (28%), Positives = 92/200 (46%)
Query: 385 STSGQ---LFTYGDGTFGVLG------HGNLQNVSQPKEVESLRGLKVKSVACGPWHTAA 435
STSG+ + ++GDG G LG G + +P V +L + S++ G +H+ A
Sbjct: 38 STSGERRTVMSFGDGNLGALGLSSSSIPGMGMDAYEPTVVSNLPS-DISSISAGHYHSLA 96
Query: 436 IVDIMVDRCKSNAIGGKLFTWGDADKGRLGHV--DGER--KLLPTCVTRLVDFDFVQASC 491
+ G+++ WG D+G+LG + D R + P V L + + A
Sbjct: 97 VTS-----------SGEIWAWGRNDEGQLGRIVIDSSRDSRSEPKRVEGLENVNVQAAFA 145
Query: 492 GRMLTVGLTGLGKVYTMGSAVHGQLG--NPKAKDRSITVVEGKLKEEFVKGISSGSYHVA 549
+++ + G ++ G + GQLG N + R + VE E VK +S G H
Sbjct: 146 SGVVSAAIGDDGSLWVWGRSKRGQLGLGNGIIEARVPSRVENLAAEHVVK-VSLGWGHAL 204
Query: 550 VLTSGGSVYTWGKNANGQLG 569
LT G V+ WG A+G++G
Sbjct: 205 ALTVDGKVFGWGYVADGRVG 224
Score = 151 (58.2 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 60/240 (25%), Positives = 100/240 (41%)
Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGH----GNLQNVSQPKEVESLRGLKVKSV 426
+S ++ G +H+ V++SG+++ +G G LG + + S+PK VE L + V++
Sbjct: 84 ISSISAGHYHSLAVTSSGEIWAWGRNDEGQLGRIVIDSSRDSRSEPKRVEGLENVNVQAA 143
Query: 427 ACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDG--ERKLLPTCVTRLVDF 484
+AAI D G L+ WG + +G+LG +G E ++ P+ V L
Sbjct: 144 FASGVVSAAIGD-----------DGSLWVWGRSKRGQLGLGNGIIEARV-PSRVENLAAE 191
Query: 485 DFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSG 544
V+ S G + LT GKV+ G G++GN +E L + G G
Sbjct: 192 HVVKVSLGWGHALALTVDGKVFGWGYVADGRVGNVGLP------LEASLLDSITDGSMKG 245
Query: 545 SYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAIC 604
+ L + K D P VE + +V + CGS + +C
Sbjct: 246 HHAAGDLNLEAAEK---KVVEAMSKENDMPIAWEPCLVEETCNEKVADIACGSDHSLILC 302
Score = 145 (56.1 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 54/204 (26%), Positives = 99/204 (48%)
Query: 237 VDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGH 296
V+ +N + A P L+E V +I+ G+ H+ ++ +G + G G+LG
Sbjct: 262 VEAMSKENDMPI-AWEPCLVEETCNEKVADIACGSDHSLILCHDGTLLSAGSNIYGQLGR 320
Query: 297 -KVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGE--IYTWGHNNHGADLVGERRS 353
K ++ + + E S I S++ G + A+ GE I +WG N + +G R
Sbjct: 321 SKQDLGMKPVDITE--SPI---SIAAGLGHSLAICNRGERNILSWGWNR--SRQLG--RG 371
Query: 354 RSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPK 413
+ LPR++ + DG + V+ G H+ V+ G+ + +G G G LG G+ + +P
Sbjct: 372 KPENLPREV-EGFDGESPASVSAGRVHSLCVTEKGEAWVWGCGKNGRLGLGSSSDEPEPM 430
Query: 414 EVESLRGLKVKSVACGPWHTAAIV 437
+E + G +++VA G H+ +V
Sbjct: 431 LLEDVEGCVLQAVA-GFDHSLILV 453
Score = 134 (52.2 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 51/203 (25%), Positives = 85/203 (41%)
Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
G + G + ++A +P +E+ V +SLG HA +T +G+VF WG DGR
Sbjct: 163 GRSKRGQLGLGNGIIEARVPSRVENLAAEHVVKVSLGWGHALALTVDGKVFGWGYVADGR 222
Query: 294 LGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRS 353
+G+ V + + L G + G+ A K + N D+
Sbjct: 223 VGN-VGLPLEASLLDSITDGSMKGHHAAGDLNLEAAEKK-VVEAMSKEN---DMP----- 272
Query: 354 RSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPK 413
W P + +T + +V+ +ACG H+ I+ G L + G +G LG +P
Sbjct: 273 -IAWEPCLVEETCNE-KVADIACGSDHSLILCHDGTLLSAGSNIYGQLGRSKQDLGMKPV 330
Query: 414 EVESLRGLKVKSVACGPWHTAAI 436
++ S+A G H+ AI
Sbjct: 331 DITE----SPISIAAGLGHSLAI 349
Score = 125 (49.1 bits), Expect = 6.3e-19, Sum P(2) = 6.3e-19
Identities = 48/183 (26%), Positives = 74/183 (40%)
Query: 411 QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGE 470
+P VE KV +ACG H+ + C G L + G G+LG +
Sbjct: 276 EPCLVEETCNEKVADIACGSDHSLIL-------CHD----GTLLSAGSNIYGQLGRSKQD 324
Query: 471 RKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVE 530
+ P +T + A G L + G + + G QLG K ++ VE
Sbjct: 325 LGMKPVDITESPIS--IAAGLGHSLAICNRGERNILSWGWNRSRQLGRGKPENLP-REVE 381
Query: 531 GKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQV 590
G E +S+G H +T G + WG NG+LGLG S + P +E + +
Sbjct: 382 G-FDGESPASVSAGRVHSLCVTEKGEAWVWGCGKNGRLGLGSSSDEPEPMLLEDVEGCVL 440
Query: 591 ESV 593
++V
Sbjct: 441 QAV 443
Score = 40 (19.1 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 715 GQSFTSKQSRNVERKPGECLESASSLSSGL 744
GQ SKQ + KP + ES S+++GL
Sbjct: 316 GQLGRSKQDLGM--KPVDITESPISIAAGL 343
>ZFIN|ZDB-GENE-040426-2216 [details] [associations]
symbol:rcc1 "regulator of chromosome condensation
1" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-040426-2216
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GeneTree:ENSGT00700000104160 KO:K11493 CTD:1104
HOGENOM:HOG000234341 HOVERGEN:HBG017712 OrthoDB:EOG4320Z9
HSSP:P18754 OMA:GTESCFV EMBL:CR855299 EMBL:BC059796 EMBL:BC066721
IPI:IPI00511389 RefSeq:NP_998343.1 UniGene:Dr.77012 SMR:Q6NY65
STRING:Q6NY65 Ensembl:ENSDART00000054026 GeneID:406457
KEGG:dre:406457 InParanoid:Q6NY65 NextBio:20818049 Uniprot:Q6NY65
Length = 418
Score = 256 (95.2 bits), Expect = 7.4e-19, P = 7.4e-19
Identities = 106/363 (29%), Positives = 168/363 (46%)
Query: 269 LGAKHAALVTKEGEVFCWGEGKDGRLGHKVN-MDVSCPKLVECLSGINVQSVSCGEFQTC 327
L H + ++G V G+G G+LG + M+ P LV GI VQ+V+ G C
Sbjct: 23 LKVSHISHGQEKGLVLVLGQGDVGQLGLGEDVMERKKPALVTLPEGI-VQAVAGGMHTVC 81
Query: 328 ALTKSGEIYTWGHNNHGADLVGERRSR--SHWLPRKLFDTLDGVRVSKVACGEWHTAIVS 385
L+ +G +YT+G N+ GA +G S S +P K+ D G ++ +V+ G+ H+A ++
Sbjct: 82 -LSDTGNVYTFGCNDEGA--LGRDTSEEGSETVPAKV-DL--GEKIIQVSAGDSHSAALT 135
Query: 386 TSGQLFTYGD--GTFGVLGHGN-LQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
G ++ +G GV+G ++ + P +V + + VK V+ G H +M+
Sbjct: 136 EDGGVYVWGSFRDNNGVIGLLEPMKKCTVPVKVPIDKPV-VKIVS-GNDHL-----VML- 187
Query: 443 RCKSNAIGGKLFTWGDADKGRLGHVD------GERK-LLPTCVTRLVDFD------FVQA 489
G+L+T G ++G+LG V G RK L+ ++V F
Sbjct: 188 -----TAHGELYTSGCGEQGQLGRVAEHFANRGGRKGLMRLLEPQMVIIKPRGKVVFTDV 242
Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVK--GISSGSYH 547
CG T ++ G VY G + + QLG + V K G S G +H
Sbjct: 243 FCGAYFTFAVSKEGHVYGFGLSNYHQLGTQSTNTCFVPVKLSSFKNSTTSWVGFSGGQHH 302
Query: 548 VAVLTSGGSVYTWGKNANGQLGLG-DSQERETPTFVEALRDRQVESVVCGSSITAAICLH 606
L S G Y+ G+ G+LGLG D E+ PT V + D QV V CG+S++ A+
Sbjct: 303 TLCLNSEGKAYSLGRAEYGRLGLGKDVGEKSEPTVVPGISDVQV--VACGASVSYAVTKQ 360
Query: 607 KSI 609
S+
Sbjct: 361 GSV 363
Score = 252 (93.8 bits), Expect = 2.1e-18, P = 2.1e-18
Identities = 109/397 (27%), Positives = 178/397 (44%)
Query: 228 VLG-GDIGGAVDGS-VSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFC 285
VLG GD+G G V + K LP+ + AV G H ++ G V+
Sbjct: 39 VLGQGDVGQLGLGEDVMERKKPALVTLPEGIVQAVA--------GGMHTVCLSDTGNVYT 90
Query: 286 WGEGKDGRLGHKVNMDVS--CPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG--HN 341
+G +G LG + + S P V+ G + VS G+ + ALT+ G +Y WG +
Sbjct: 91 FGCNDEGALGRDTSEEGSETVPAKVDL--GEKIIQVSAGDSHSAALTEDGGVYVWGSFRD 148
Query: 342 NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVL 401
N+G + E + +P K+ +D V K+ G H +++ G+L+T G G G L
Sbjct: 149 NNGVIGLLEPMKKCT-VPVKV--PIDKP-VVKIVSGNDHLVMLTAHGELYTSGCGEQGQL 204
Query: 402 GHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIG--GKLFTWGDA 459
G ++ +R L+ + V P D+ + A+ G ++ +G +
Sbjct: 205 GRVAEHFANRGGRKGLMRLLEPQMVIIKPRGKVVFTDVFCGAYFTFAVSKEGHVYGFGLS 264
Query: 460 DKGRLGHVDGERKLLPTCVTRLVDF--DFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG 517
+ +LG +P ++ + +V S G+ T+ L GK Y++G A +G+LG
Sbjct: 265 NYHQLGTQSTNTCFVPVKLSSFKNSTTSWVGFSGGQHHTLCLNSEGKAYSLGRAEYGRLG 324
Query: 518 NPK-AKDRSI-TVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQE 575
K ++S TVV G + V +S SY V T GSV++WG N QLG G+ ++
Sbjct: 325 LGKDVGEKSEPTVVPGISDVQVVACGASVSYAV---TKQGSVFSWGMGTNLQLGTGEEED 381
Query: 576 RETPTFV--EALRDRQVESVVCGSSITAAICLHKSIS 610
+P + + L +R V SV G T + K S
Sbjct: 382 EWSPVEMTGKQLENRVVLSVSSGGQHTVLLVKDKQES 418
Score = 175 (66.7 bits), Expect = 8.5e-10, P = 8.5e-10
Identities = 63/213 (29%), Positives = 93/213 (43%)
Query: 423 VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDG--ERKLLPTCVTR 480
VK P + + V G + G D G+LG + ERK P VT
Sbjct: 7 VKRQTAAPSDSTVAKKLKVSHISHGQEKGLVLVLGQGDVGQLGLGEDVMERKK-PALVT- 64
Query: 481 LVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITV-VEGKLKEEFVK 539
+ VQA G M TV L+ G VYT G G LG +++ S TV + L E+ ++
Sbjct: 65 -LPEGIVQAVAGGMHTVCLSDTGNVYTFGCNDEGALGRDTSEEGSETVPAKVDLGEKIIQ 123
Query: 540 GISSGSYHVAVLTSGGSVYTWG--KNANGQLGLGDSQERETPTFVEALRDRQVESVVCGS 597
+S+G H A LT G VY WG ++ NG +GL + ++ T V+ D+ V +V G+
Sbjct: 124 -VSAGDSHSAALTEDGGVYVWGSFRDNNGVIGLLEPMKKCTVP-VKVPIDKPVVKIVSGN 181
Query: 598 SITAAICLHKSI---SVGDQSSCSQCRMPFGFR 627
+ H + G+Q + F R
Sbjct: 182 DHLVMLTAHGELYTSGCGEQGQLGRVAEHFANR 214
>MGI|MGI:1913989 [details] [associations]
symbol:Rcc1 "regulator of chromosome condensation 1"
species:10090 "Mus musculus" [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=ISO] [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0000794 "condensed nuclear chromosome"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0005085 "guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=ISO;IDA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007052
"mitotic spindle organization" evidence=ISO] [GO:0007059
"chromosome segregation" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007088 "regulation of mitosis" evidence=ISO]
[GO:0007090 "regulation of S phase of mitotic cell cycle"
evidence=ISO] [GO:0031492 "nucleosomal DNA binding" evidence=ISO]
[GO:0042393 "histone binding" evidence=ISO] [GO:0050790 "regulation
of catalytic activity" evidence=IDA] [GO:0051225 "spindle assembly"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
MGI:MGI:1913989 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0007088 GO:GO:0007059 GO:GO:0051301
GO:GO:0007067 GO:GO:0007052 GO:GO:0051225 GO:GO:0000082
GO:GO:0031965 GO:GO:0000790 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0000794 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GO:GO:0007090 GO:GO:0031492 GeneTree:ENSGT00700000104160 KO:K11493
CTD:1104 HOGENOM:HOG000234341 HOVERGEN:HBG017712 EMBL:AK150153
EMBL:BC019807 IPI:IPI00626402 RefSeq:NP_598639.1 UniGene:Mm.255045
ProteinModelPortal:Q8VE37 SMR:Q8VE37 MINT:MINT-2568412
STRING:Q8VE37 PhosphoSite:Q8VE37 PaxDb:Q8VE37 PRIDE:Q8VE37
Ensembl:ENSMUST00000084250 Ensembl:ENSMUST00000105951 GeneID:100088
KEGG:mmu:100088 OrthoDB:EOG4320Z9 ChiTaRS:RCC1 NextBio:354253
Bgee:Q8VE37 CleanEx:MM_RCC1 Genevestigator:Q8VE37
GermOnline:ENSMUSG00000028896 Uniprot:Q8VE37
Length = 421
Score = 255 (94.8 bits), Expect = 1.0e-18, P = 1.0e-18
Identities = 105/351 (29%), Positives = 165/351 (47%)
Query: 273 HAALVTKEGEVFCWGEGKDGRLGHKVN-MDVSCPKLVECLSGINVQSVSCGEFQTCALTK 331
H + T+ G V G+G G+LG + ++ P LV L + VQ+ G T L++
Sbjct: 27 HRSHNTEPGLVLTLGQGDVGQLGLGESVLERKKPALVPLLQDV-VQA-EAGGMHTVCLSQ 84
Query: 332 SGEIYTWGHNNHGADLVGERRS--RSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQ 389
SG++Y++G N+ GA +G S S +P K+ + + +V +V+ G+ HTA ++ G+
Sbjct: 85 SGQVYSFGCNDEGA--LGRDTSVEGSEMVPGKV-ELQE--KVVQVSAGDSHTAALTEDGR 139
Query: 390 LFTYGD--GTFGVLGHGNLQNVSQ-PKEVESLRGLKVKSVACGPWHTAAIV---DIMVDR 443
+F +G GV+G S P +V+ L VK VA G H + D+
Sbjct: 140 VFLWGSFRDNNGVIGLLEPMKKSMVPVQVQ-LDAPVVK-VASGNDHLVMLTNDGDLYTLG 197
Query: 444 CKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCV------TRLVDFDFVQASCGRMLTV 497
C G+L + R G R L+P CV TR F A CG T
Sbjct: 198 CGEQ---GQLGRVPELFANRGGRQGLGRLLVPRCVLLKSRGTR-GRVRFQDAFCGAYFTF 253
Query: 498 GLTGLGKVYTMGSAVHGQLGNPKAKD----RSITVVEGKLKEEFVKGISSGSYHVAVLTS 553
++ G VY G + + QLG P +++T + K +V G S G +H + S
Sbjct: 254 AISREGHVYGFGLSNYHQLGTPGTGSCFIPQNLTSFKNSTKS-WV-GFSGGQHHTVCMDS 311
Query: 554 GGSVYTWGKNANGQLGLGD-SQERETPTFVEALRDRQVESVVCGSSITAAI 603
G Y+ G+ G+LGLG+ ++E+ PT + L V SV CG+S+ A+
Sbjct: 312 EGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLP--VVSSVACGASVGYAV 360
Score = 251 (93.4 bits), Expect = 2.9e-18, P = 2.9e-18
Identities = 113/402 (28%), Positives = 186/402 (46%)
Query: 229 LG-GDIGGAVDG-SVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCW 286
LG GD+G G SV + K AL+P LL+ DV G H +++ G+V+ +
Sbjct: 40 LGQGDVGQLGLGESVLERKKP--ALVP-LLQ-----DVVQAEAGGMHTVCLSQSGQVYSF 91
Query: 287 GEGKDGRLGHKVNMDVS--CPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG--HNN 342
G +G LG +++ S P VE + VQ VS G+ T ALT+ G ++ WG +N
Sbjct: 92 GCNDEGALGRDTSVEGSEMVPGKVELQEKV-VQ-VSAGDSHTAALTEDGRVFLWGSFRDN 149
Query: 343 HGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLG 402
+G + E +S +P ++ LD V KVA G H +++ G L+T G G G LG
Sbjct: 150 NGVIGLLEPMKKS-MVPVQV--QLDAP-VVKVASGNDHLVMLTNDGDLYTLGCGEQGQLG 205
Query: 403 H--------GNLQNVSQ---PKEV----ESLRG-LKVKSVACGPWHTAAIVDIMVDRCKS 446
G Q + + P+ V RG ++ + CG + T AI
Sbjct: 206 RVPELFANRGGRQGLGRLLVPRCVLLKSRGTRGRVRFQDAFCGAYFTFAI---------- 255
Query: 447 NAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDF--DFVQASCGRMLTVGLTGLGK 504
+ G ++ +G ++ +LG +P +T + +V S G+ TV + GK
Sbjct: 256 -SREGHVYGFGLSNYHQLGTPGTGSCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGK 314
Query: 505 VYTMGSAVHGQLG-NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKN 563
Y++G A +G+LG A+++SI + +L V ++ G+ ++ G V+ WG
Sbjct: 315 AYSLGRAEYGRLGLGEGAEEKSIPTLISRLP--VVSSVACGASVGYAVSKDGRVFAWGMG 372
Query: 564 ANGQLGLGDSQERETPTFV--EALRDRQVESVVCGSSITAAI 603
N QLG G ++ +P + + L +R V +V G T +
Sbjct: 373 TNYQLGTGQDEDAWSPVEMTGKQLENRVVLTVSSGGQHTVLL 414
Score = 214 (80.4 bits), Expect = 4.2e-14, P = 4.2e-14
Identities = 97/347 (27%), Positives = 147/347 (42%)
Query: 226 EGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFC 285
EG LG D +V+GS ++P +E + V +S G H A +T++G VF
Sbjct: 96 EGALGRDT--SVEGS---------EMVPGKVE--LQEKVVQVSAGDSHTAALTEDGRVFL 142
Query: 286 WGEGKD--GRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNH 343
WG +D G +G M S V+ V V+ G LT G++YT G
Sbjct: 143 WGSFRDNNGVIGLLEPMKKSMVP-VQVQLDAPVVKVASGNDHLVMLTNDGDLYTLGCGEQ 201
Query: 344 GA-----DLVGERRSRSHW----LPR----KLFDTLDGVRVSKVACGEWHTAIVSTSGQL 390
G +L R R +PR K T VR CG + T +S G +
Sbjct: 202 GQLGRVPELFANRGGRQGLGRLLVPRCVLLKSRGTRGRVRFQDAFCGAYFTFAISREGHV 261
Query: 391 FTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKS---VACGPWHTAAIVDIMVDRCKSN 447
+ +G + LG + P+ + S + KS + G HT C +
Sbjct: 262 YGFGLSNYHQLGTPGTGSCFIPQNLTSFKN-STKSWVGFSGGQHHTV---------CMDS 311
Query: 448 AIGGKLFTWGDADKGRLGHVDG-ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVY 506
GK ++ G A+ GRLG +G E K +PT ++RL V +CG + ++ G+V+
Sbjct: 312 E--GKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPVVSSV--ACGASVGYAVSKDGRVF 367
Query: 507 TMGSAVHGQLGNPKAKDR-SITVVEGK-LKEEFVKGISSGSYHVAVL 551
G + QLG + +D S + GK L+ V +SSG H +L
Sbjct: 368 AWGMGTNYQLGTGQDEDAWSPVEMTGKQLENRVVLTVSSGGQHTVLL 414
Score = 170 (64.9 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 56/164 (34%), Positives = 80/164 (48%)
Query: 439 IMVDRCKSNAIGGKLFTWGDADKGRLGHVDG--ERKLLPTCVTRLVDFDFVQASCGRMLT 496
+ V N G + T G D G+LG + ERK P V L D VQA G M T
Sbjct: 23 VKVSHRSHNTEPGLVLTLGQGDVGQLGLGESVLERKK-PALVPLLQDV--VQAEAGGMHT 79
Query: 497 VGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLK-EEFVKGISSGSYHVAVLTSGG 555
V L+ G+VY+ G G LG + + S +V GK++ +E V +S+G H A LT G
Sbjct: 80 VCLSQSGQVYSFGCNDEGALGRDTSVEGS-EMVPGKVELQEKVVQVSAGDSHTAALTEDG 138
Query: 556 SVYTWG--KNANGQLGLGDSQERETPTFVEALRDRQVESVVCGS 597
V+ WG ++ NG +GL + ++ V+ D V V G+
Sbjct: 139 RVFLWGSFRDNNGVIGLLEPMKKSMVP-VQVQLDAPVVKVASGN 181
>UNIPROTKB|F1MDF3 [details] [associations]
symbol:ALS2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051036 "regulation of endosome size" evidence=IEA]
[GO:0048812 "neuron projection morphogenesis" evidence=IEA]
[GO:0043539 "protein serine/threonine kinase activator activity"
evidence=IEA] [GO:0043234 "protein complex" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=IEA] [GO:0032313 "regulation of Rab GTPase activity"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0030676 "Rac
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0030027 "lamellipodium" evidence=IEA] [GO:0017137 "Rab GTPase
binding" evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange
factor activity" evidence=IEA] [GO:0016197 "endosomal transport"
evidence=IEA] [GO:0016050 "vesicle organization" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0008104
"protein localization" evidence=IEA] [GO:0007626 "locomotory
behavior" evidence=IEA] [GO:0007528 "neuromuscular junction
development" evidence=IEA] [GO:0006979 "response to oxidative
stress" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005769 "early endosome"
evidence=IEA] [GO:0001881 "receptor recycling" evidence=IEA]
[GO:0001726 "ruffle" evidence=IEA] [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0005543 "phospholipid binding"
evidence=IEA] InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621
PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415
Pfam:PF02204 GO:GO:0005829 GO:GO:0005813 GO:GO:0043234
GO:GO:0014069 GO:GO:0008104 GO:GO:0006979 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0007528 GO:GO:0048812
GO:GO:0007626 GO:GO:0035249 GO:GO:0043539 GO:GO:0016197
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 InterPro:IPR003409
InterPro:IPR003123 Pfam:PF02493 SMART:SM00698 PROSITE:PS51205
GeneTree:ENSGT00600000084242 OMA:AKPAIDF GO:GO:0005769
GO:GO:0017112 GO:GO:0030676 GO:GO:0001662 GO:GO:0032855
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:DAAA02005594
EMBL:DAAA02005595 EMBL:DAAA02005596 IPI:IPI00905690
Ensembl:ENSBTAT00000060956 Uniprot:F1MDF3
Length = 1661
Score = 208 (78.3 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 63/188 (33%), Positives = 96/188 (51%)
Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKD---GRLGHKVNMDVSCPK---LVECLSGINVQ 317
V + +LG KH L+T EVF +G+ G L + +CP L L G V
Sbjct: 43 VLHAALGVKHGVLLT---EVFKPSDGEVYSFGTLPWRSEPAETCPSNPILESALVGQYVV 99
Query: 318 SVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDT----LDGVRVSK 373
+V+ G F T A+T SG +Y WG N+ G V + P + D+ L VR+ +
Sbjct: 100 TVATGSFHTGAVTDSGVVYMWGENSAGQCAVANQPYVPEPNPVSISDSETSPLLAVRILQ 159
Query: 374 VACGEWHTAIVSTSGQLFTYGDGT-FGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWH 432
+ACGE HT +S S +++ +G G G++ V++P++VE L G V VACG +H
Sbjct: 160 LACGEEHTLALSLSREIWAWGTGCQLGLIT--TTFPVTKPQKVEHLAGRVVLQVACGAFH 217
Query: 433 TAAIVDIM 440
+ A+V +
Sbjct: 218 SLALVQCL 225
Score = 149 (57.5 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 33/97 (34%), Positives = 50/97 (51%)
Query: 253 PKLLESAVMLDVQNISL-----GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKL 307
P+LL A + + + L G A L + EV+ WG+GK+G+LGH + P
Sbjct: 497 PRLLRKAARVKTRTVVLTPTYSGEADALLPSLRTEVWTWGKGKEGQLGHGDVLPRLQPLC 556
Query: 308 VECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHG 344
V+CL G V + G + + ALT ++Y+WG N G
Sbjct: 557 VKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGSNTFG 593
Score = 123 (48.4 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 44/139 (31%), Positives = 66/139 (47%)
Query: 255 LLESAVMLD-VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVEC--- 310
+LESA++ V ++ G+ H VT G V+ WGE G+ V P V
Sbjct: 88 ILESALVGQYVVTVATGSFHTGAVTDSGVVYMWGENSAGQCAVANQPYVPEPNPVSISDS 147
Query: 311 ----LSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTL 366
L + + ++CGE T AL+ S EI+ WG G L + P+K+ + L
Sbjct: 148 ETSPLLAVRILQLACGEEHTLALSLSREIWAWGT---GCQLGLITTTFPVTKPQKV-EHL 203
Query: 367 DGVRVSKVACGEWHT-AIV 384
G V +VACG +H+ A+V
Sbjct: 204 AGRVVLQVACGAFHSLALV 222
Score = 115 (45.5 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 31/97 (31%), Positives = 46/97 (47%)
Query: 504 KVYTMGSAVHGQLGN----PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYT 559
+V+T G GQLG+ P+ + + ++GK E + + +G YH LT+ VY+
Sbjct: 531 EVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGK---EVIH-LEAGGYHSLALTAKSQVYS 586
Query: 560 WGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCG 596
WG N GQLG D P + + V SV G
Sbjct: 587 WGSNTFGQLGHSDFPTT-VPRLAKVNSENGVWSVAAG 622
Score = 107 (42.7 bits), Expect = 7.6e-09, Sum P(2) = 7.6e-09
Identities = 34/105 (32%), Positives = 52/105 (49%)
Query: 377 GEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAI 436
GE + S +++T+G G G LGHG++ QP V+ L G +V + G +H+ A+
Sbjct: 519 GEADALLPSLRTEVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLAL 578
Query: 437 VDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRL 481
KS ++++WG G+LGH D PT V RL
Sbjct: 579 T------AKS-----QVYSWGSNTFGQLGHSD-----FPTTVPRL 607
Score = 78 (32.5 bits), Expect = 7.7e-15, Sum P(2) = 7.7e-15
Identities = 18/47 (38%), Positives = 25/47 (53%)
Query: 557 VYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
V+TWGK GQLG GD R P V+ L ++V + G + A+
Sbjct: 532 VWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLAL 578
>MGI|MGI:1919784 [details] [associations]
symbol:Rcc2 "regulator of chromosome condensation 2"
species:10090 "Mus musculus" [GO:0000775 "chromosome, centromeric
region" evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0051301 "cell division"
evidence=IEA] MGI:MGI:1919784 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 GO:GO:0000775 GO:GO:0005730 GO:GO:0051301
GO:GO:0007067 GO:GO:0005819 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0005874 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 EMBL:AL954710 eggNOG:COG5184
GeneTree:ENSGT00700000104160 CTD:55920 HOGENOM:HOG000232061
HOVERGEN:HBG080538 OMA:FGENKLG OrthoDB:EOG4DNF4B EMBL:AK076040
EMBL:BC086666 EMBL:AK129370 IPI:IPI00222509 RefSeq:NP_776292.1
UniGene:Mm.253 ProteinModelPortal:Q8BK67 SMR:Q8BK67 STRING:Q8BK67
PhosphoSite:Q8BK67 PaxDb:Q8BK67 PRIDE:Q8BK67
Ensembl:ENSMUST00000038893 Ensembl:ENSMUST00000071169 GeneID:108911
KEGG:mmu:108911 UCSC:uc008vna.2 InParanoid:A2AWQ3 ChiTaRS:RCC2
NextBio:361459 Bgee:Q8BK67 CleanEx:MM_RCC2 Genevestigator:Q8BK67
GermOnline:ENSMUSG00000040945 Uniprot:Q8BK67
Length = 520
Score = 257 (95.5 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 85/354 (24%), Positives = 154/354 (43%)
Query: 271 AKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALT 330
A H+ L+T EG+++ WG + G+LGH V P+L+E LS + +CG T ALT
Sbjct: 157 AAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALT 216
Query: 331 KSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQL 390
+G ++ +G N G +G + +P +G ++K+ACG + ++ G L
Sbjct: 217 DTGSVFAFGENKMGQLGLGNQTDA---VPSPAQIMYNGQPITKMACGAEFSMLMDCKGNL 273
Query: 391 FTYGDGTFGVLGHGN-------LQNVSQPKEVESLR-GLKVKSVACG---PWHTAAIVDI 439
+++G +G LGH + Q + E+ R + ++ G P + D+
Sbjct: 274 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 333
Query: 440 MVDRCKSNAIGG--KLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTV 497
+ + ++F+WG GRLGH + + +++P V +L DF A+ +
Sbjct: 334 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLV-KLFDFPGRGAT---QIYA 389
Query: 498 GLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSV 557
G T V +G N + L ++ ++ G + ++ + S
Sbjct: 390 GYTCSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSI-IVAADEST 448
Query: 558 YTWGKNAN-GQLGLGDSQERETPTF--VEALRDRQVESVVCGSSITAAICLHKS 608
+WG + G+LG GD + + + V+ L E V G S + I +S
Sbjct: 449 ISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVIARDES 502
Score = 201 (75.8 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 93/353 (26%), Positives = 157/353 (44%)
Query: 305 PKLVECLSGINVQSVSCGEFQTCAL--TKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL 362
P CLSG+ V++V G +L T G++++WG N G +G ++ PR L
Sbjct: 137 PHRYGCLSGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQ--LGHGDTKRVEAPR-L 193
Query: 363 FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN-VSQPKEVESLRGL 421
+ L + ACG HT ++ +G +F +G+ G LG GN + V P ++ G
Sbjct: 194 IEALSHEAIVLAACGRNHTLALTDTGSVFAFGENKMGQLGLGNQTDAVPSPAQI-MYNGQ 252
Query: 422 KVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGH-VDG------ER--- 471
+ +ACG A +++D CK N L+++G + G+LGH DG +R
Sbjct: 253 PITKMACG-----AEFSMLMD-CKGN-----LYSFGCPEYGQLGHNSDGKFIARAQRIEY 301
Query: 472 --KLLPTCVTRLV----DFDFV--------QASCGRMLTVGLTGLGKVYTMGSAVHGQLG 517
+L+P V + D + +CG T+ L +V++ G +G+LG
Sbjct: 302 DCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLG 361
Query: 518 NPKAKDRSITVVEGKLKEEFVKGISS--GSYHVAVLTSG-GSVYTWGKNANGQLGLGDSQ 574
+ + KD + + KL + +G + Y + S G ++ WG +
Sbjct: 362 HAEQKDEMVPRLV-KLFDFPGRGATQIYAGYTCSFAVSEVGGLFFWGAT---------NT 411
Query: 575 ERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVG-DQSSCSQCRMP-FG 625
RE+ + +A++D +CG I + C SI V D+S+ S P FG
Sbjct: 412 SRESTMYPKAVQD------LCGWRIRSLACGKSSIIVAADESTISWGPSPTFG 458
Score = 182 (69.1 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 54/178 (30%), Positives = 89/178 (50%)
Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS--GINVQSVSC 321
V++++ GA H ++ + VF WG G GRLGH D P+LV+ G +
Sbjct: 330 VRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGATQIYA 389
Query: 322 GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT 381
G + A+++ G ++ WG N R S + P+ + D L G R+ +ACG+ +
Sbjct: 390 GYTCSFAVSEVGGLFFWGATNTS------RESTMY--PKAVQD-LCGWRIRSLACGK-SS 439
Query: 382 AIVSTSGQLFTYGDG-TFGVLGHGNLQNVSQP--KEVESLRGLKVKSVACGPWHTAAI 436
IV+ ++G TFG LG+G+ + S +EV++L G+ + VA G H+ I
Sbjct: 440 IIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVI 497
Score = 167 (63.8 bits), Expect = 9.9e-09, P = 9.9e-09
Identities = 54/193 (27%), Positives = 90/193 (46%)
Query: 388 GQLFTYGDGTFGVLG----------HGNL-QNVSQPKEVESLRGLKVKSVACGPWHTAAI 436
GQL +G + ++G + NL QN+ P L G++V++V G + A
Sbjct: 102 GQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVRVRTVVSG---SCAA 158
Query: 437 VDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLT 496
+++ GKL++WG +KG+LGH D +R P + L V A+CGR T
Sbjct: 159 HSLLI------TTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHT 212
Query: 497 VGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGS 556
+ LT G V+ G GQLG D + + + + ++ G+ ++ G+
Sbjct: 213 LALTDTGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPITKMACGAEFSMLMDCKGN 272
Query: 557 VYTWGKNANGQLG 569
+Y++G GQLG
Sbjct: 273 LYSFGCPEYGQLG 285
Score = 38 (18.4 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 14/43 (32%), Positives = 20/43 (46%)
Query: 1 MDEKFLIWYSGQKEK-QLRLNSVTKIIMGQRTVNFQCQPQPDR 42
MD K ++ G E QL NS K I + + + C+ P R
Sbjct: 267 MDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRR 309
>MGI|MGI:1921268 [details] [associations]
symbol:Als2 "amyotrophic lateral sclerosis 2 (juvenile)"
species:10090 "Mus musculus" [GO:0001662 "behavioral fear response"
evidence=IMP] [GO:0001726 "ruffle" evidence=IDA] [GO:0001881
"receptor recycling" evidence=IMP] [GO:0005085 "guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0005089 "Rho
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0005097 "Rab GTPase activator activity" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0005769 "early endosome"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO;IDA]
[GO:0005829 "cytosol" evidence=ISO] [GO:0006979 "response to
oxidative stress" evidence=IMP] [GO:0007032 "endosome organization"
evidence=ISO] [GO:0007041 "lysosomal transport" evidence=ISO]
[GO:0007409 "axonogenesis" evidence=ISO] [GO:0007528 "neuromuscular
junction development" evidence=IMP] [GO:0007626 "locomotory
behavior" evidence=IMP] [GO:0008104 "protein localization"
evidence=IMP] [GO:0008219 "cell death" evidence=ISO] [GO:0014069
"postsynaptic density" evidence=IDA] [GO:0016020 "membrane"
evidence=ISO] [GO:0016050 "vesicle organization" evidence=IDA]
[GO:0016197 "endosomal transport" evidence=IMP] [GO:0016601 "Rac
protein signal transduction" evidence=ISO] [GO:0017112 "Rab
guanyl-nucleotide exchange factor activity" evidence=ISO]
[GO:0017137 "Rab GTPase binding" evidence=ISO] [GO:0030027
"lamellipodium" evidence=IDA] [GO:0030424 "axon" evidence=ISO]
[GO:0030425 "dendrite" evidence=ISO] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030675 "Rac GTPase activator activity"
evidence=ISO] [GO:0030676 "Rac guanyl-nucleotide exchange factor
activity" evidence=ISO] [GO:0031982 "vesicle" evidence=ISO]
[GO:0032313 "regulation of Rab GTPase activity" evidence=IDA]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=ISO] [GO:0035023 "regulation of Rho protein signal
transduction" evidence=IEA] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IMP] [GO:0042802 "identical protein
binding" evidence=ISO] [GO:0042803 "protein homodimerization
activity" evidence=ISO] [GO:0043005 "neuron projection"
evidence=ISO] [GO:0043025 "neuronal cell body" evidence=ISO]
[GO:0043197 "dendritic spine" evidence=IDA] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0043539 "protein
serine/threonine kinase activator activity" evidence=ISO]
[GO:0045860 "positive regulation of protein kinase activity"
evidence=ISO] [GO:0048365 "Rac GTPase binding" evidence=ISO]
[GO:0048812 "neuron projection morphogenesis" evidence=ISO]
[GO:0051260 "protein homooligomerization" evidence=ISO] [GO:0071902
"positive regulation of protein serine/threonine kinase activity"
evidence=ISO] InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621
PROSITE:PS00741 PROSITE:PS50003 PROSITE:PS50010 SMART:SM00233
MGI:MGI:1921268 INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204
GO:GO:0005829 GO:GO:0043234 GO:GO:0042803 GO:GO:0014069
GO:GO:0008104 GO:GO:0006979 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0007528 GO:GO:0048812 GO:GO:0007626
GO:GO:0035249 GO:GO:0043539 GO:GO:0030027 GO:GO:0016197
GO:GO:0030426 Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 EMBL:CH466548 GO:GO:0001726
eggNOG:COG4642 InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493
SMART:SM00698 PROSITE:PS51205 GeneTree:ENSGT00600000084242
CTD:57679 HOVERGEN:HBG037320 KO:K04575 OMA:AKPAIDF
OrthoDB:EOG4FTVZP ChiTaRS:ALS2 GO:GO:0005769 GO:GO:0031982
GO:GO:0017137 GO:GO:0017112 GO:GO:0030676 GO:GO:0001662
GO:GO:0032855 GO:GO:0001881 GO:GO:0051036 GO:GO:0032313
GO:GO:0016050 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 EMBL:AB053307 EMBL:AC153652 EMBL:BC031479
EMBL:BC046828 EMBL:AK014320 IPI:IPI00170364 IPI:IPI00309844
RefSeq:NP_001153420.2 RefSeq:NP_082993.4 RefSeq:NP_666221.1
UniGene:Mm.272078 STRING:Q920R0 PhosphoSite:Q920R0 PaxDb:Q920R0
PRIDE:Q920R0 Ensembl:ENSMUST00000027178 Ensembl:ENSMUST00000163058
GeneID:74018 KEGG:mmu:74018 UCSC:uc007bdm.2 UCSC:uc007bdn.2
HOGENOM:HOG000033908 InParanoid:Q920R0 NextBio:339546
Genevestigator:Q920R0 GermOnline:ENSMUSG00000026024 Uniprot:Q920R0
Length = 1651
Score = 220 (82.5 bits), Expect = 1.6e-18, Sum P(2) = 1.6e-18
Identities = 61/196 (31%), Positives = 100/196 (51%)
Query: 250 ALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVE 309
+L P+ L V +LG +H L+T++GEV+ +G + S P L
Sbjct: 29 SLTPERLPGWGGKTVLQAALGVRHGVLLTEDGEVYSFGTLP--WKSESAEICPSSPLLES 86
Query: 310 CLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG- 368
L G +V +V+ G F + A+T+SG +Y WG N G V ++ P + D+
Sbjct: 87 ALVGHHVITVATGSFHSGAVTESGVVYMWGENAAGQCAVANQQYVPEPSPVSISDSETSP 146
Query: 369 ---VRVSKVACGEWHTAIVSTSGQLFTYGDGT-FGVLGHGNLQNVSQPKEVESLRGLKVK 424
VR+ ++ACGE HT +S S +++ +G G G++ V++P++VE L G V
Sbjct: 147 SLAVRILQLACGEEHTLALSLSREIWAWGTGCQLGLIT--TTFPVTKPQKVEHLAGRVVL 204
Query: 425 SVACGPWHTAAIVDIM 440
VACG +H+ A+V +
Sbjct: 205 QVACGAFHSLALVQCL 220
Score = 144 (55.7 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 33/97 (34%), Positives = 49/97 (50%)
Query: 253 PKLLESAVMLDVQNISL-----GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKL 307
P+LL A + + + L G A L + EV+ WG+GK+G+LGH + P
Sbjct: 487 PRLLRKAARVKTRTVVLTPTYSGEADALLPSLRTEVWTWGKGKEGQLGHGDVLPRLQPLC 546
Query: 308 VECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHG 344
V+CL G V + G + ALT ++Y+WG N G
Sbjct: 547 VKCLDGKEVIHLEAGGSHSLALTAKSQVYSWGSNTFG 583
Score = 101 (40.6 bits), Expect = 1.6e-18, Sum P(2) = 1.6e-18
Identities = 29/97 (29%), Positives = 45/97 (46%)
Query: 504 KVYTMGSAVHGQLGN----PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYT 559
+V+T G GQLG+ P+ + + ++GK E + + +G H LT+ VY+
Sbjct: 521 EVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGK---EVIH-LEAGGSHSLALTAKSQVYS 576
Query: 560 WGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCG 596
WG N GQLG + P + + V SV G
Sbjct: 577 WGSNTFGQLGHSEFPTT-VPRLSKVSSENGVWSVAAG 612
Score = 84 (34.6 bits), Expect = 9.5e-17, Sum P(2) = 9.5e-17
Identities = 19/47 (40%), Positives = 26/47 (55%)
Query: 557 VYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
V+TWGK GQLG GD R P V+ L ++V + G S + A+
Sbjct: 522 VWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGSHSLAL 568
>FB|FBgn0000247 [details] [associations]
symbol:ca "claret" species:7227 "Drosophila melanogaster"
[GO:0006727 "ommochrome biosynthetic process" evidence=IMP]
[GO:0006856 "eye pigment precursor transport" evidence=TAS]
[GO:0017137 "Rab GTPase binding" evidence=IPI] [GO:0005622
"intracellular" evidence=IDA] [GO:0008057 "eye pigment granule
organization" evidence=IMP] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IPI] [GO:0017112 "Rab guanyl-nucleotide
exchange factor activity" evidence=IPI] [GO:0060967 "negative
regulation of gene silencing by RNA" evidence=IMP]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE014297 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PROSITE:PS50012 GO:GO:0008057
GO:GO:0060967 GO:GO:0006727 GO:GO:0006856
GeneTree:ENSGT00700000104208 FlyBase:FBgn0000247 EMBL:BT057978
RefSeq:NP_733309.3 UniGene:Dm.6851 SMR:Q9VAG5 MINT:MINT-1644098
STRING:Q9VAG5 EnsemblMetazoa:FBtr0085484 GeneID:43518
KEGG:dme:Dmel_CG31037 UCSC:CG31037-RA CTD:43518 InParanoid:Q9VAG5
OMA:DNTLHIV GenomeRNAi:43518 NextBio:834351 Uniprot:Q9VAG5
Length = 1961
Score = 215 (80.7 bits), Expect = 1.9e-18, Sum P(3) = 1.9e-18
Identities = 59/206 (28%), Positives = 102/206 (49%)
Query: 267 ISLGAKHAALVTKEGEVFCWGE-GKDGRLGHKVNMDVSCP----KLVECLSGINVQ--SV 319
IS G + A V +G + WG G + + + P K ++ LS +N+Q ++
Sbjct: 1120 ISAGCAYCACVV-DGTAYFWGSSGIPSYYSAQKSTEPPEPAHAVKSLDLLSQLNLQVHAI 1178
Query: 320 SCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEW 379
CG T LT +G +Y+ G+NN +G R L L LDG+ ++ + G++
Sbjct: 1179 KCGRQHTLILTNNG-LYSLGNNN--LCQLGIGRHMQMALQPMLVTALDGMNITMLEAGQY 1235
Query: 380 HTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDI 439
H A V+ G+L+ +G G +G LG G+ +N++ P+ V + K+ ++ G HT +
Sbjct: 1236 HNAAVA-DGKLYMWGWGIYGQLGQGSCENIATPQLVSFFKFKKILQISLGHAHTLVLCGA 1294
Query: 440 MVDRCKSNAIGGKLFTWGDADKGRLG 465
++N G +LF +G G+LG
Sbjct: 1295 PNSHMEANHCGNELFVFGSNHFGQLG 1320
Score = 149 (57.5 bits), Expect = 1.7e-11, Sum P(3) = 1.7e-11
Identities = 57/221 (25%), Positives = 95/221 (42%)
Query: 256 LESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC-PKLVECLSGI 314
L S + L V I G +H ++T G ++ G +LG +M ++ P LV L G+
Sbjct: 1167 LLSQLNLQVHAIKCGRQHTLILTNNG-LYSLGNNNLCQLGIGRHMQMALQPMLVTALDGM 1225
Query: 315 NVQSVSCGEFQTCALTKSGEIYTWGHNNHG------ADLVGERRSRSHWLPRKLFDTLDG 368
N+ + G++ A+ G++Y WG +G + + + S + +K+ G
Sbjct: 1226 NITMLEAGQYHNAAVA-DGKLYMWGWGIYGQLGQGSCENIATPQLVSFFKFKKILQISLG 1284
Query: 369 VRVSKVACG--EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSV 426
+ V CG H +LF +G FG LG GN + K +R L+V
Sbjct: 1285 HAHTLVLCGAPNSHMEANHCGNELFVFGSNHFGQLGTGNSDH-GDTKTNLPVR-LEVGDC 1342
Query: 427 ACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKG-RLGH 466
+ HT ++ VD +LFTWG + + RL +
Sbjct: 1343 SLRLIHTKFFTNLAVDE------QDRLFTWGSSPQALRLAN 1377
Score = 113 (44.8 bits), Expect = 1.9e-18, Sum P(3) = 1.9e-18
Identities = 28/87 (32%), Positives = 44/87 (50%)
Query: 541 ISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET--PTFVEALRDRQVESVVCGSS 598
ISSG +H +++S ++YTWGKN QLG D R P+ ++++ +R + V CGS
Sbjct: 1506 ISSGLFHFCLISSSCTLYTWGKNLEHQLGTEDKDRRAVLKPSPIDSI-ERPMY-VDCGSD 1563
Query: 599 ITAAICLHKSISVGDQSSCSQCRMPFG 625
T + + +S QC G
Sbjct: 1564 FTLVMTTDHVVRAFGGNSNGQCGRDLG 1590
Score = 80 (33.2 bits), Expect = 4.6e-15, Sum P(3) = 4.6e-15
Identities = 35/113 (30%), Positives = 48/113 (42%)
Query: 468 DGERKLLPTCV-TRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSI 526
D L P V T V +Q S G ++ +YT G + QLG + KDR
Sbjct: 1484 DPTEHLTPHLVDTSEVAGRILQISSGLFHFCLISSSCTLYTWGKNLEHQLGT-EDKDRRA 1542
Query: 527 TVVEGKLKE-EFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLG--LGDSQER 576
+ + E + GS V+T+ V +G N+NGQ G LG S ER
Sbjct: 1543 VLKPSPIDSIERPMYVDCGSDFTLVMTTDHVVRAFGGNSNGQCGRDLGPSVER 1595
Score = 57 (25.1 bits), Expect = 1.0e-12, Sum P(3) = 1.0e-12
Identities = 20/67 (29%), Positives = 32/67 (47%)
Query: 453 LFTWGDADKGRLGHVDGERK--LLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
L+TWG + +LG D +R+ L P+ + + +V CG T+ +T V G
Sbjct: 1522 LYTWGKNLEHQLGTEDKDRRAVLKPSPIDSIERPMYVD--CGSDFTLVMTTDHVVRAFGG 1579
Query: 511 AVHGQLG 517
+GQ G
Sbjct: 1580 NSNGQCG 1586
Score = 45 (20.9 bits), Expect = 1.9e-18, Sum P(3) = 1.9e-18
Identities = 23/99 (23%), Positives = 37/99 (37%)
Query: 187 LNYADTRCPKNESHRLVTPTYGSPLIERKDIL-KDVMIWGEGVLGGDIGGAVDGSVSQNK 245
++Y D C + H PL+ + +D I E V D+ S S
Sbjct: 555 IHYVDLHCRSDSDHFTAASLLDDPLVANTEKENRDADI--EKVDQSDVSAQKSDSTSATT 612
Query: 246 TQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVF 284
T +L + S + V IS + A+L T + + F
Sbjct: 613 TATSSLDQSDMPSTAINAVSVIS--SAMASLHTSDEDRF 649
Score = 38 (18.4 bits), Expect = 8.5e-11, Sum P(3) = 8.5e-11
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 694 NLQGSLSEEVKEEKGALTPS 713
NL+ L E K+ + L PS
Sbjct: 1528 NLEHQLGTEDKDRRAVLKPS 1547
>ZFIN|ZDB-GENE-090311-56 [details] [associations]
symbol:si:ch73-190m4.1 "si:ch73-190m4.1"
species:7955 "Danio rerio" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0006464 "cellular protein modification process" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-090311-56
GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 GeneTree:ENSGT00700000104312
EMBL:CR788312 EMBL:CU467858 IPI:IPI00933554 RefSeq:XP_688463.5
UniGene:Dr.113692 UniGene:Dr.113776 Ensembl:ENSDART00000111114
GeneID:559981 KEGG:dre:559981 NextBio:20883233 Uniprot:F1RDE7
Length = 992
Score = 280 (103.6 bits), Expect = 2.5e-18, Sum P(3) = 2.5e-18
Identities = 78/274 (28%), Positives = 142/274 (51%)
Query: 214 RKDILKDVMIWGE-GVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAK 272
+K+ ++ +++ GE G + D GG V + T+ L K LE+ ++ I+ G +
Sbjct: 77 KKNTIR-LIVCGEYGAVLLDDGGKV--LIMDKSTECSPL--KGLENRQVIQ---IACGDQ 128
Query: 273 HAALVTKEGEVFCWGEGKDGRLG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTK 331
H+ +T +G++F WGE G+LG K P+ ++ L GI V +S G + L+
Sbjct: 129 HSMALTNDGQLFVWGENALGQLGLRKEQAGTQSPRHLQSLCGIPVAQISAGGNHSFVLSL 188
Query: 332 SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
SG ++ WG N+ G +G+ R ++P + ++L ++ ++CG HTA ++ G +F
Sbjct: 189 SGVVFGWGGNSAGQLGLGDTTDR--FVPT-VVNSLKRKKIVSISCGGEHTAALAKGGTVF 245
Query: 392 TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
T+G G FG LGH + ++ P+ V L G KV V CG HT S A
Sbjct: 246 TFGSGGFGQLGHNSFKDEHHPRLVAELWGSKVSQVTCGRNHTLV----------STASPK 295
Query: 452 KLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFD 485
++++G +G+LG+ + ++ +P V + +++
Sbjct: 296 LIYSFGCGMQGQLGNGEQVKQSVPLPVDQPTEYN 329
Score = 251 (93.4 bits), Expect = 3.6e-16, Sum P(2) = 3.6e-16
Identities = 67/220 (30%), Positives = 106/220 (48%)
Query: 366 LDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQ-PKEVESLRGLKVK 424
L+ +V ++ACG+ H+ ++ GQLF +G+ G LG Q +Q P+ ++SL G+ V
Sbjct: 115 LENRQVIQIACGDQHSMALTNDGQLFVWGENALGQLGLRKEQAGTQSPRHLQSLCGIPVA 174
Query: 425 SVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDF 484
++ G H+ + ++ G +F WG G+LG D + +PT V L
Sbjct: 175 QISAGGNHSFVL-----------SLSGVVFGWGGNSAGQLGLGDTTDRFVPTVVNSLKRK 223
Query: 485 DFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSG 544
V SCG T L G V+T GS GQLG+ KD + +L V ++ G
Sbjct: 224 KIVSISCGGEHTAALAKGGTVFTFGSGGFGQLGHNSFKDEHHPRLVAELWGSKVSQVTCG 283
Query: 545 SYHVAVLTSGGS-VYTWGKNANGQLGLGDSQERETPTFVE 583
H V T+ +Y++G GQLG G+ ++ P V+
Sbjct: 284 RNHTLVSTASPKLIYSFGCGMQGQLGNGEQVKQSVPLPVD 323
Score = 196 (74.1 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 60/201 (29%), Positives = 87/201 (43%)
Query: 404 GNLQNVSQPKEVESLRGLK---VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDAD 460
G + + + E L+GL+ V +ACG H+ A+ + G+LF WG+
Sbjct: 98 GKVLIMDKSTECSPLKGLENRQVIQIACGDQHSMALTN-----------DGQLFVWGENA 146
Query: 461 KGRLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNP 519
G+LG + P + L Q S G + L+ G V+ G GQLG
Sbjct: 147 LGQLGLRKEQAGTQSPRHLQSLCGIPVAQISAGGNHSFVLSLSGVVFGWGGNSAGQLGLG 206
Query: 520 KAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETP 579
DR + V LK + + IS G H A L GG+V+T+G GQLG ++ P
Sbjct: 207 DTTDRFVPTVVNSLKRKKIVSISCGGEHTAALAKGGTVFTFGSGGFGQLGHNSFKDEHHP 266
Query: 580 TFVEALRDRQVESVVCGSSIT 600
V L +V V CG + T
Sbjct: 267 RLVAELWGSKVSQVTCGRNHT 287
Score = 184 (69.8 bits), Expect = 5.2e-09, Sum P(2) = 5.2e-09
Identities = 49/147 (33%), Positives = 79/147 (53%)
Query: 460 DKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNP 519
D G++ +D + P + L + +Q +CG ++ LT G+++ G GQLG
Sbjct: 96 DGGKVLIMDKSTECSP--LKGLENRQVIQIACGDQHSMALTNDGQLFVWGENALGQLG-- 151
Query: 520 KAKDRSITVVEGKLKEEF---VKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQER 576
K+++ T L+ V IS+G H VL+ G V+ WG N+ GQLGLGD+ +R
Sbjct: 152 LRKEQAGTQSPRHLQSLCGIPVAQISAGGNHSFVLSLSGVVFGWGGNSAGQLGLGDTTDR 211
Query: 577 ETPTFVEALRDRQVESVVCGSSITAAI 603
PT V +L+ +++ S+ CG TAA+
Sbjct: 212 FVPTVVNSLKRKKIVSISCGGEHTAAL 238
Score = 41 (19.5 bits), Expect = 2.5e-18, Sum P(3) = 2.5e-18
Identities = 11/35 (31%), Positives = 20/35 (57%)
Query: 938 SGSVEDSKVARTEPQQKGTKASKLEYAEQYEPGIY 972
SGS D A EP+Q T +++ ++ ++Y I+
Sbjct: 807 SGSELDLDPA--EPEQHITTSNRTKFVDEYVDHIF 839
Score = 37 (18.1 bits), Expect = 2.5e-18, Sum P(3) = 2.5e-18
Identities = 7/27 (25%), Positives = 15/27 (55%)
Query: 488 QASCGRMLTVGLTGLGKVYTMGSAVHG 514
Q CG+ + L KV++ ++++G
Sbjct: 374 QCECGKDPRKAIKDLKKVFSSAASLNG 400
>WB|WBGene00017195 [details] [associations]
symbol:glo-4 species:6239 "Caenorhabditis elegans"
[GO:0019915 "lipid storage" evidence=IMP] [GO:0045202 "synapse"
evidence=IDA] [GO:0030424 "axon" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0030424 GO:GO:0045202 GO:GO:0019915
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GeneTree:ENSGT00700000104208 EMBL:FO081074
PIR:T28816 PIR:T28817 RefSeq:NP_505392.2 ProteinModelPortal:Q5DX34
SMR:Q5DX34 STRING:Q5DX34 PaxDb:Q5DX34 EnsemblMetazoa:F07C3.4
GeneID:179306 KEGG:cel:CELE_F07C3.4 UCSC:F07C3.4 CTD:179306
WormBase:F07C3.4 HOGENOM:HOG000021586 InParanoid:Q5DX34 OMA:MANHEDV
NextBio:904820 Uniprot:Q5DX34
Length = 1392
Score = 223 (83.6 bits), Expect = 2.8e-18, Sum P(3) = 2.8e-18
Identities = 66/208 (31%), Positives = 99/208 (47%)
Query: 358 LPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVES 417
LPR L G R +ACG H ++S+SGQL +G FG G G+ ++ +V+
Sbjct: 767 LPRVL--EYPGGRPRAIACGAEHILVLSSSGQLSAWGGNRFGQCGVGHSFRIANLHQVDG 824
Query: 418 LRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHV--DGERKLLP 475
++ +ACG +H+A I C G L+T+G G+LGH + +L+P
Sbjct: 825 -DWPAIEKIACGQFHSAFI-------CSD----GSLWTFGWGVWGQLGHGGRNNSNQLVP 872
Query: 476 TCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKE 535
T V L+ Q +CGR TV LT G+V GS +GQ+G + L
Sbjct: 873 TRVNGLI-CKVTQIACGRAHTVVLTDTGRVLVCGSGSYGQMGVDDDIKKVFAFTPLPLGP 931
Query: 536 EFVKGISSGSYHVAVLTSGGSVYTWGKN 563
V+ I++ YH +T V+ WG+N
Sbjct: 932 LRVRDIATHYYHSICITEDNRVFEWGRN 959
Score = 194 (73.4 bits), Expect = 4.1e-16, Sum P(3) = 4.1e-16
Identities = 50/151 (33%), Positives = 76/151 (50%)
Query: 305 PKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGE--RRSRSHWLPRKL 362
P+++E G ++++CG L+ SG++ WG N G VG R + H +
Sbjct: 768 PRVLEYPGG-RPRAIACGAEHILVLSSSGQLSAWGGNRFGQCGVGHSFRIANLHQVDG-- 824
Query: 363 FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQ--PKEVESLRG 420
D + K+ACG++H+A + + G L+T+G G +G LGHG N +Q P V L
Sbjct: 825 ----DWPAIEKIACGQFHSAFICSDGSLWTFGWGVWGQLGHGGRNNSNQLVPTRVNGLI- 879
Query: 421 LKVKSVACGPWHTAAIVDI-MVDRCKSNAIG 450
KV +ACG HT + D V C S + G
Sbjct: 880 CKVTQIACGRAHTVVLTDTGRVLVCGSGSYG 910
Score = 162 (62.1 bits), Expect = 8.0e-12, Sum P(3) = 8.0e-12
Identities = 42/188 (22%), Positives = 97/188 (51%)
Query: 252 LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECL 311
LP++LE + I+ GA+H +++ G++ WG + G+ G + ++ V+
Sbjct: 767 LPRVLEYPGGRP-RAIACGAEHILVLSSSGQLSAWGGNRFGQCGVGHSFRIANLHQVDG- 824
Query: 312 SGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRV 371
++ ++CG+F + + G ++T+G G G R + + +P ++ + +V
Sbjct: 825 DWPAIEKIACGQFHSAFICSDGSLWTFGWGVWGQLGHGGRNNSNQLVPTRVNGLI--CKV 882
Query: 372 SKVACGEWHTAIVSTSGQLFTYGDGTFGVLG-HGNLQNVSQPKEVESLRGLKVKSVACGP 430
+++ACG HT +++ +G++ G G++G +G +++ V + L L+V+ +A
Sbjct: 883 TQIACGRAHTVVLTDTGRVLVCGSGSYGQMGVDDDIKKVFAFTPLP-LGPLRVRDIATHY 941
Query: 431 WHTAAIVD 438
+H+ I +
Sbjct: 942 YHSICITE 949
Score = 151 (58.2 bits), Expect = 7.1e-05, Sum P(2) = 7.1e-05
Identities = 42/143 (29%), Positives = 70/143 (48%)
Query: 236 AVDGSVSQNKTQVDALLPK----LLESAVMLD--VQNISLGAKHAALVTKEGEVFCWGEG 289
+ +GS + + A +P+ L E LD + +++ G H+AL+T EG ++ WG+G
Sbjct: 990 STNGSTPRVNLNLPAEIPREDLGLREVKHFLDGNIVSVACGLSHSALITSEGTLYTWGKG 1049
Query: 290 KDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHG-ADLV 348
D +LGH + P V +G +VS G T A T G ++ WG N+ G ++
Sbjct: 1050 LDYQLGHGNKNERMEPHQVFEPNGAKWVNVSLGNNHTIASTDDGSVFAWGKNDFGQCGVL 1109
Query: 349 GERRSRSHWLPRKLF-DTLDGVR 370
++ S + +K F DG R
Sbjct: 1110 TKKNGNSADVTKKFFFQARDGRR 1132
Score = 142 (55.0 bits), Expect = 8.0e-08, Sum P(3) = 8.0e-08
Identities = 39/106 (36%), Positives = 54/106 (50%)
Query: 360 RKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLR 419
R++ LDG VS VACG H+A++++ G L+T+G G LGHGN +P +V
Sbjct: 1014 REVKHFLDGNIVS-VACGLSHSALITSEGTLYTWGKGLDYQLGHGNKNERMEPHQVFEPN 1072
Query: 420 GLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG 465
G K +V+ G HT A D G +F WG D G+ G
Sbjct: 1073 GAKWVNVSLGNNHTIASTD-----------DGSVFAWGKNDFGQCG 1107
Score = 114 (45.2 bits), Expect = 4.1e-16, Sum P(3) = 4.1e-16
Identities = 31/95 (32%), Positives = 46/95 (48%)
Query: 478 VTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSIT--VVEGKLKE 535
V +D + V +CG + +T G +YT G + QLG+ +R V E
Sbjct: 1016 VKHFLDGNIVSVACGLSHSALITSEGTLYTWGKGLDYQLGHGNKNERMEPHQVFEPN-GA 1074
Query: 536 EFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGL 570
++V +S G+ H T GSV+ WGKN GQ G+
Sbjct: 1075 KWVN-VSLGNNHTIASTDDGSVFAWGKNDFGQCGV 1108
Score = 105 (42.0 bits), Expect = 2.8e-18, Sum P(3) = 2.8e-18
Identities = 26/83 (31%), Positives = 42/83 (50%)
Query: 538 VKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGS 597
+ ++ G H A++TS G++YTWGK + QLG G+ ER P V + +V G+
Sbjct: 1024 IVSVACGLSHSALITSEGTLYTWGKGLDYQLGHGNKNERMEPHQVFEPNGAKWVNVSLGN 1083
Query: 598 SITAAICLHKSISVGDQSSCSQC 620
+ T A S+ ++ QC
Sbjct: 1084 NHTIASTDDGSVFAWGKNDFGQC 1106
Score = 89 (36.4 bits), Expect = 3.3e-10, Sum P(3) = 3.3e-10
Identities = 31/105 (29%), Positives = 43/105 (40%)
Query: 413 KEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERK 472
+EV+ + SVACG H+A I G L+TWG +LGH + +
Sbjct: 1014 REVKHFLDGNIVSVACGLSHSALITS-----------EGTLYTWGKGLDYQLGHGNKNER 1062
Query: 473 LLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG 517
+ P V +V S G T+ T G V+ G GQ G
Sbjct: 1063 MEPHQVFEPNGAKWVNVSLGNNHTIASTDDGSVFAWGKNDFGQCG 1107
Score = 86 (35.3 bits), Expect = 8.0e-08, Sum P(3) = 8.0e-08
Identities = 29/129 (22%), Positives = 55/129 (42%)
Query: 217 ILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAAL 276
I D +W G + G + N Q L+P + + ++ V I+ G H +
Sbjct: 842 ICSDGSLW---TFGWGVWGQLGHGGRNNSNQ---LVPTRV-NGLICKVTQIACGRAHTVV 894
Query: 277 VTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVEC----LSGINVQSVSCGEFQTCALTKS 332
+T G V G G G++G V+ D+ K+ L + V+ ++ + + +T+
Sbjct: 895 LTDTGRVLVCGSGSYGQMG--VDDDIK--KVFAFTPLPLGPLRVRDIATHYYHSICITED 950
Query: 333 GEIYTWGHN 341
++ WG N
Sbjct: 951 NRVFEWGRN 959
Score = 38 (18.4 bits), Expect = 2.8e-18, Sum P(3) = 2.8e-18
Identities = 8/18 (44%), Positives = 14/18 (77%)
Query: 122 ELSQVRSLCGSPSLSLSE 139
ELSQ+ S+ + +LS+S+
Sbjct: 474 ELSQIYSIAKAINLSMSD 491
Score = 37 (18.1 bits), Expect = 2.4e-11, Sum P(3) = 2.4e-11
Identities = 15/52 (28%), Positives = 22/52 (42%)
Query: 552 TSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
++ GS N ++ D RE F+ D + SV CG S +A I
Sbjct: 990 STNGSTPRVNLNLPAEIPREDLGLREVKHFL----DGNIVSVACGLSHSALI 1037
>UNIPROTKB|Q3MHW0 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9913 "Bos taurus" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0050709 "negative regulation of protein
secretion" evidence=IEA] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=IEA] InterPro:IPR027048 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 GO:GO:0005730 GO:GO:0045111 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0050709
eggNOG:COG5184 GeneTree:ENSGT00700000104160 EMBL:BC104610
IPI:IPI00689945 RefSeq:NP_001069489.1 UniGene:Bt.1247
ProteinModelPortal:Q3MHW0 STRING:Q3MHW0 PRIDE:Q3MHW0
Ensembl:ENSBTAT00000007022 GeneID:534377 KEGG:bta:534377 CTD:26297
HOGENOM:HOG000154414 HOVERGEN:HBG051746 InParanoid:Q3MHW0 KO:K15421
OMA:NIWAPKP OrthoDB:EOG4J1183 NextBio:20876380
PANTHER:PTHR22870:SF7 Uniprot:Q3MHW0
Length = 464
Score = 252 (93.8 bits), Expect = 3.4e-18, P = 3.4e-18
Identities = 92/301 (30%), Positives = 139/301 (46%)
Query: 283 VFCWGEGKDGRLG--HKVNMDVSCPKLVE-CLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
+F WG G+LG HK ++ +S +L + C SG ++ ++ G + +T G ++ G
Sbjct: 17 LFAWGANSYGQLGLGHKEDV-LSAQQLSDFCKSGC-IKRITGGGGHSAVVTDEGSLFVCG 74
Query: 340 HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
N G +G ++ P K +L G + +VACG T I++ +GQ+ + G +FG
Sbjct: 75 LNKDGQLGLGHTEEVLYFTPCK---SLLGCAIQQVACGWDFTIILTENGQVLSCGSNSFG 131
Query: 400 VLG--HGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
LG HG + V P+ +E LR KV S+A G H A G +F WG
Sbjct: 132 QLGVPHGPRRCVI-PQAIELLRE-KVVSIAAGLRHALAAT-----------ASGTVFQWG 178
Query: 458 D--ADKGRLGHVDGERKLL------PTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMG 509
A GR G+ L P+ VT L + V G + LT G++Y G
Sbjct: 179 TGLASSGRR-LCPGQTLPLFLTAKEPSTVTGLENSQAVCVLAGSDHSASLTDAGELYVWG 237
Query: 510 SAVHGQLGNPKAKDRSITVVEGK-LKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
S HGQL + A +E + + E + + SG H+ T G V+TWG+ GQL
Sbjct: 238 SNKHGQLASQAAFLLLPQRIEARCFQNEKIAAVWSGWTHLVAQTVTGKVFTWGRADYGQL 297
Query: 569 G 569
G
Sbjct: 298 G 298
Score = 232 (86.7 bits), Expect = 5.8e-16, P = 5.8e-16
Identities = 107/368 (29%), Positives = 159/368 (43%)
Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
++ I+ G H+A+VT EG +F G KDG+LG +V + L G +Q V+CG
Sbjct: 51 IKRITGGGGHSAVVTDEGSLFVCGLNKDGQLGLGHTEEVLYFTPCKSLLGCAIQQVACGW 110
Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
T LT++G++ + G N+ G L R +P+ + L +V +A G H
Sbjct: 111 DFTIILTENGQVLSCGSNSFG-QLGVPHGPRRCVIPQAI--ELLREKVVSIAAGLRHALA 167
Query: 384 VSTSGQLFTYGDGTFGV---LGHGN-LQNVSQPKEVESLRGLKVKSVAC---GPWHTAAI 436
+ SG +F +G G L G L KE ++ GL+ C G H+A++
Sbjct: 168 ATASGTVFQWGTGLASSGRRLCPGQTLPLFLTAKEPSTVTGLENSQAVCVLAGSDHSASL 227
Query: 437 VDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCV-TRLVDFDFVQAS-CGRM 494
D G+L+ WG G+L LLP + R + + A G
Sbjct: 228 TD-----------AGELYVWGSNKHGQLAS-QAAFLLLPQRIEARCFQNEKIAAVWSGWT 275
Query: 495 LTVGLTGLGKVYTMGSAVHGQLGNP---------KAKDRSITVVEGKLKEE-----FVKG 540
V T GKV+T G A +GQLG + +D S+ G K + G
Sbjct: 276 HLVAQTVTGKVFTWGRADYGQLGRTVETREGWESEKQDPSLPG-SGPQKGTPSCLPCLTG 334
Query: 541 ---ISSGSYH-VAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCG 596
IS GS H +AV+ GG ++WG N +G G G + P V LR V CG
Sbjct: 335 ATEISCGSEHNLAVI--GGVCHSWGWNEHGMCGDGTEADVWAPKPVPGLRFFLGLHVGCG 392
Query: 597 SSITAAIC 604
+ + A+C
Sbjct: 393 AGHSLALC 400
Score = 180 (68.4 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 66/235 (28%), Positives = 107/235 (45%)
Query: 378 EWHTA-IVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESL-RGLKVKSVACGPWHTAA 435
E H++ V T+ LF +G ++G LG G+ ++V +++ + +K + G H+A
Sbjct: 4 EPHSSEAVPTAAALFAWGANSYGQLGLGHKEDVLSAQQLSDFCKSGCIKRITGGGGHSAV 63
Query: 436 IVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRML 495
+ D G LF G G+LG E L T L+ Q +CG
Sbjct: 64 VTD-----------EGSLFVCGLNKDGQLGLGHTEEVLYFTPCKSLLGCAIQQVACGWDF 112
Query: 496 TVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGG 555
T+ LT G+V + GS GQLG P R + +L E V I++G H T+ G
Sbjct: 113 TIILTENGQVLSCGSNSFGQLGVPHGPRRCVIPQAIELLREKVVSIAAGLRHALAATASG 172
Query: 556 SVYTWGKN--ANGQ-LGLGDSQE----RETPTFVEALRDRQVESVVCGSSITAAI 603
+V+ WG ++G+ L G + + P+ V L + Q V+ GS +A++
Sbjct: 173 TVFQWGTGLASSGRRLCPGQTLPLFLTAKEPSTVTGLENSQAVCVLAGSDHSASL 227
Score = 179 (68.1 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 63/250 (25%), Positives = 108/250 (43%)
Query: 328 ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
A+ + ++ WG N++G +G + ++L D + ++ G H+A+V+
Sbjct: 10 AVPTAAALFAWGANSYGQLGLGHKEDVLS--AQQLSDFCKSGCIKRITGGGGHSAVVTDE 67
Query: 388 GQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSN 447
G LF G G LG G+ + V +SL G ++ VACG W I+ N
Sbjct: 68 GSLFVCGLNKDGQLGLGHTEEVLYFTPCKSLLGCAIQQVACG-WDFTIILT-------EN 119
Query: 448 AIGGKLFTWGDADKGRLGHVDGERK-LLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVY 506
G++ + G G+LG G R+ ++P + L + V + G + T G V+
Sbjct: 120 ---GQVLSCGSNSFGQLGVPHGPRRCVIPQAIELLRE-KVVSIAAGLRHALAATASGTVF 175
Query: 507 TMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISS--------GSYHVAVLTSGGSVY 558
G+ + G +++ + + V G+ + GS H A LT G +Y
Sbjct: 176 QWGTGLASS-GRRLCPGQTLPLFLTAKEPSTVTGLENSQAVCVLAGSDHSASLTDAGELY 234
Query: 559 TWGKNANGQL 568
WG N +GQL
Sbjct: 235 VWGSNKHGQL 244
Score = 175 (66.7 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 74/283 (26%), Positives = 119/283 (42%)
Query: 251 LLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEG--KDGRL---GHKVNMDVSC- 304
++P+ +E + V +I+ G +HA T G VF WG G GR G + + ++
Sbjct: 143 VIPQAIE-LLREKVVSIAAGLRHALAATASGTVFQWGTGLASSGRRLCPGQTLPLFLTAK 201
Query: 305 -PKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL- 362
P V L V G + +LT +GE+Y WG N HG L + + LP+++
Sbjct: 202 EPSTVTGLENSQAVCVLAGSDHSASLTDAGELYVWGSNKHG-QLASQ--AAFLLLPQRIE 258
Query: 363 FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHG--NLQNVSQPKEVESLRG 420
+++ V G H + +G++FT+G +G LG + K+ SL G
Sbjct: 259 ARCFQNEKIAAVWSGWTHLVAQTVTGKVFTWGRADYGQLGRTVETREGWESEKQDPSLPG 318
Query: 421 LKVK--SVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDG-ERKL-LPT 476
+ + +C P T A IGG +WG + G G DG E + P
Sbjct: 319 SGPQKGTPSCLPCLTGATEISCGSEHNLAVIGGVCHSWGWNEHGMCG--DGTEADVWAPK 376
Query: 477 CVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNP 519
V L F + CG ++ L L + +G H + +P
Sbjct: 377 PVPGLRFFLGLHVGCGAGHSLALCQLPALPALGQ--HPSVTSP 417
Score = 134 (52.2 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 38/125 (30%), Positives = 61/125 (48%)
Query: 505 VYTMGSAVHGQLGNPKAKD-RSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKN 563
++ G+ +GQLG +D S + K +K I+ G H AV+T GS++ G N
Sbjct: 17 LFAWGANSYGQLGLGHKEDVLSAQQLSDFCKSGCIKRITGGGGHSAVVTDEGSLFVCGLN 76
Query: 564 ANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMP 623
+GQLGLG ++E T ++L ++ V CG T + + + +S Q +P
Sbjct: 77 KDGQLGLGHTEEVLYFTPCKSLLGCAIQQVACGWDFTIILTENGQVLSCGSNSFGQLGVP 136
Query: 624 FGFRR 628
G RR
Sbjct: 137 HGPRR 141
>TAIR|locus:2144291 [details] [associations]
symbol:AT5G11580 "AT5G11580" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008536 "Ran GTPase binding" evidence=ISS]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002688 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 HSSP:P18754 EMBL:AY058861 EMBL:AY079040
IPI:IPI00537184 RefSeq:NP_568250.1 UniGene:At.5137 UniGene:At.75215
ProteinModelPortal:Q93Z10 SMR:Q93Z10 PRIDE:Q93Z10
EnsemblPlants:AT5G11580.1 GeneID:831030 KEGG:ath:AT5G11580
TAIR:At5g11580 InParanoid:Q93Z10 OMA:WTFGLGD PhylomeDB:Q93Z10
ProtClustDB:CLSN2689608 Genevestigator:Q93Z10 Uniprot:Q93Z10
Length = 553
Score = 180 (68.4 bits), Expect = 4.8e-18, Sum P(2) = 4.8e-18
Identities = 60/225 (26%), Positives = 105/225 (46%)
Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLR---GLKVKSVA 427
V+ V G+ H L+++G+ G LG G+ ++ ++P+ VE+ GL V +A
Sbjct: 210 VALVGPGDIHKDNSYDVSVLYSWGNNHHGQLGLGDGESRARPQTVETFNQKSGLTVYDIA 269
Query: 428 CGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF- 486
CG HTA ++ + K +I +T+G + G+LGH + LP V+ L + +
Sbjct: 270 CGAHHTA-LLTYRKETPKGPSI---CWTFGFGENGQLGHRSNKSSSLPEPVSDLPEHAYL 325
Query: 487 VQASCGRMLTVGLTGLGKVYT------MGSAVHGQLGNPKAKDRSIT--VVEGKLKEEFV 538
V CG T ++ G V++ +G +A D S+ + G +
Sbjct: 326 VSVDCGLFHTSVVSSEGYVWSWGMERGLGLCPDVNFTEVEAGDDSVPRKISGGSSRFRDP 385
Query: 539 KGISSGSYHVAVLTSGG-SVYTWGKNANGQLGLGDSQERETPTFV 582
+S G+ H ++ GG +++WG+ NG LG G+ + PT V
Sbjct: 386 VQVSCGAAHTVLVVDGGYKLWSWGRGRNGVLGTGNVSDCYVPTLV 430
Score = 176 (67.0 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 82/309 (26%), Positives = 137/309 (44%)
Query: 262 LDVQNISLGAKHAALVTKEGEVFCWGE--GKDGRLGHKVNM-DVSCPKLVECLSGINVQS 318
L V + G+ + + G ++ WG +D +++ + P + G V
Sbjct: 142 LKVCTVKAGSMMSLAIDNVGGLWMWGNVPPQDSEPDPRLSFTSIPIPFPILDFHGRTVLK 201
Query: 319 VSCGEFQTCALTKSGEI-----------YTWGHNNHGADLVGERRSRSHWLPRKLFDTLD 367
V+CG+ AL G+I Y+WG+N+HG +G+ SR+ + F+
Sbjct: 202 VACGDEHVVALVGPGDIHKDNSYDVSVLYSWGNNHHGQLGLGDGESRARPQTVETFNQKS 261
Query: 368 GVRVSKVACGEWHTAIVSTSGQL-------FTYGDGTFGVLGHGNLQNVSQPKEVESL-R 419
G+ V +ACG HTA+++ + +T+G G G LGH + ++ S P+ V L
Sbjct: 262 GLTVYDIACGAHHTALLTYRKETPKGPSICWTFGFGENGQLGHRSNKSSSLPEPVSDLPE 321
Query: 420 GLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG-DADKGRLGHVD-GERKLLPTC 477
+ SV CG +HT+ + S+ G +++WG + G V+ E +
Sbjct: 322 HAYLVSVDCGLFHTSVV---------SSE--GYVWSWGMERGLGLCPDVNFTEVEAGDDS 370
Query: 478 VTRLVD-----F-DFVQASCGRMLTVGLTGLG-KVYTMGSAVHGQLGNPKAKDRSI-TVV 529
V R + F D VQ SCG TV + G K+++ G +G LG D + T+V
Sbjct: 371 VPRKISGGSSRFRDPVQVSCGAAHTVLVVDGGYKLWSWGRGRNGVLGTGNVSDCYVPTLV 430
Query: 530 --EGKLKEE 536
+LK E
Sbjct: 431 FWPNELKPE 439
Score = 174 (66.3 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 76/267 (28%), Positives = 120/267 (44%)
Query: 312 SGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLD--GV 369
S + V +V G + A+ G ++ WG N D + R +P F LD G
Sbjct: 140 SDLKVCTVKAGSMMSLAIDNVGGLWMWG-NVPPQDSEPDPRLSFTSIPIP-FPILDFHGR 197
Query: 370 RVSKVACGEWHTAIVSTSGQ-----------LFTYGDGTFGVLGHGNLQNVSQPKEVESL 418
V KVACG+ H + G L+++G+ G LG G+ ++ ++P+ VE+
Sbjct: 198 TVLKVACGDEHVVALVGPGDIHKDNSYDVSVLYSWGNNHHGQLGLGDGESRARPQTVETF 257
Query: 419 R---GLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLP 475
GL V +ACG HTA ++ + K +I +T+G + G+LGH + LP
Sbjct: 258 NQKSGLTVYDIACGAHHTA-LLTYRKETPKGPSI---CWTFGFGENGQLGHRSNKSSSLP 313
Query: 476 TCVTRLVDFDF-VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLK 534
V+ L + + V CG T ++ G V++ G G LG D + T VE
Sbjct: 314 EPVSDLPEHAYLVSVDCGLFHTSVVSSEGYVWSWGME-RG-LG--LCPDVNFTEVEAG-D 368
Query: 535 EEFVKGISSGS--YHVAVLTSGGSVYT 559
+ + IS GS + V S G+ +T
Sbjct: 369 DSVPRKISGGSSRFRDPVQVSCGAAHT 395
Score = 155 (59.6 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 37/111 (33%), Positives = 58/111 (52%)
Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITV-VEGKLKEEF----VKGI 541
+ + G T+ LTG G VY+ G + G+LG K D + V VE + E + G+
Sbjct: 19 ISLAAGEAHTIALTGDGCVYSWGRGMFGRLGTGKESDELVPVLVEFPNQAEGDRIRIVGV 78
Query: 542 SSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVES 592
++G+YH ++ GSV+ WG N GQLG D + P ++ L +R+ S
Sbjct: 79 AAGAYHSLAVSDDGSVWCWGYNIYGQLGF-DGENSLAPCLIKNLFERETSS 128
Score = 125 (49.1 bits), Expect = 4.8e-18, Sum P(2) = 4.8e-18
Identities = 37/119 (31%), Positives = 58/119 (48%)
Query: 253 PKLLESA-VMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVEC- 310
P LL S + + +++ G H +T +G V+ WG G GRLG D P LVE
Sbjct: 6 PTLLISEDLSRKIISLAAGEAHTIALTGDGCVYSWGRGMFGRLGTGKESDELVPVLVEFP 65
Query: 311 --LSG--INVQSVSCGEFQTCALTKSGEIYTWGHNNHGA-DLVGERRSRSHWLPRKLFD 364
G I + V+ G + + A++ G ++ WG+N +G GE S + L + LF+
Sbjct: 66 NQAEGDRIRIVGVAAGAYHSLAVSDDGSVWCWGYNIYGQLGFDGEN-SLAPCLIKNLFE 123
Score = 117 (46.2 bits), Expect = 3.6e-10, Sum P(2) = 3.6e-10
Identities = 35/120 (29%), Positives = 57/120 (47%)
Query: 370 RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN------VSQPKEVESLRGLKV 423
++ +A GE HT ++ G ++++G G FG LG G + V P + E R +++
Sbjct: 17 KIISLAAGEAHTIALTGDGCVYSWGRGMFGRLGTGKESDELVPVLVEFPNQAEGDR-IRI 75
Query: 424 KSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVD 483
VA G +H+ A+ D G ++ WG G+LG DGE L P + L +
Sbjct: 76 VGVAAGAYHSLAVSD-----------DGSVWCWGYNIYGQLGF-DGENSLAPCLIKNLFE 123
Score = 115 (45.5 bits), Expect = 4.9e-11, Sum P(2) = 4.9e-11
Identities = 42/161 (26%), Positives = 63/161 (39%)
Query: 483 DFDFVQASCGRMLTVGLTGLGKVYTMGSAV-HGQLGNPKAKDRSITVVEGKLK--EEFVK 539
D G M+++ + +G ++ G+ +P+ SI + L V
Sbjct: 141 DLKVCTVKAGSMMSLAIDNVGGLWMWGNVPPQDSEPDPRLSFTSIPIPFPILDFHGRTVL 200
Query: 540 GISSGSYHVAVLTSGGSV-----------YTWGKNANGQLGLGDSQERETPTFVEALRDR 588
++ G HV L G + Y+WG N +GQLGLGD + R P VE +
Sbjct: 201 KVACGDEHVVALVGPGDIHKDNSYDVSVLYSWGNNHHGQLGLGDGESRARPQTVETFNQK 260
Query: 589 Q---VESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGF 626
V + CG+ TA + K G S C FGF
Sbjct: 261 SGLTVYDIACGAHHTALLTYRKETPKGP-SIC----WTFGF 296
Score = 95 (38.5 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 35/110 (31%), Positives = 55/110 (50%)
Query: 505 VYTMGSAVHGQLG--NPKAKDRSITVVEGKLKEEF-VKGISSGSYHVAVLT------SGG 555
+Y+ G+ HGQLG + +++ R TV K V I+ G++H A+LT G
Sbjct: 229 LYSWGNNHHGQLGLGDGESRARPQTVETFNQKSGLTVYDIACGAHHTALLTYRKETPKGP 288
Query: 556 SV-YTWGKNANGQLGLGDSQERETPTFVEALRDRQ-VESVVCGSSITAAI 603
S+ +T+G NGQLG ++ P V L + + SV CG T+ +
Sbjct: 289 SICWTFGFGENGQLGHRSNKSSSLPEPVSDLPEHAYLVSVDCGLFHTSVV 338
Score = 56 (24.8 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 26/114 (22%), Positives = 42/114 (36%)
Query: 729 KPGECLESASSLSSGLQRWGQVSCPIRFKTHCHEKSVEPTPIPKTQMSTHSPLLRKISLG 788
K G + A GL WG V P + S PIP + H + K++ G
Sbjct: 148 KAGSMMSLAIDNVGGLWMWGNV--PPQDSEPDPRLSFTSIPIPFPILDFHGRTVLKVACG 205
Query: 789 SNFIPIASTVEKDLSESNKMLNEEVQRLRDQARNLEKQCQIGNQKVQECQQKIE 842
+ +A D+ + N +V L N Q +G+ + + Q +E
Sbjct: 206 DEHV-VALVGPGDIHKDNSY---DVSVLYSWGNNHHGQLGLGDGESRARPQTVE 255
>UNIPROTKB|F1MM88 [details] [associations]
symbol:NEK9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PROSITE:PS50012 GeneTree:ENSGT00700000104074 OMA:GCDGTFL
EMBL:DAAA02029619 IPI:IPI00714098 Ensembl:ENSBTAT00000022098
Uniprot:F1MM88
Length = 994
Score = 257 (95.5 bits), Expect = 5.3e-18, P = 5.3e-18
Identities = 84/316 (26%), Positives = 137/316 (43%)
Query: 265 QNISLGAKHAALVTKEGEVFCW-----GEGKDGRLGHKVNMDVSCPKLVECLSGINVQSV 319
+ + G H A+VT E E++ W G G+LGH PK VE L G ++ V
Sbjct: 389 RQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQV 448
Query: 320 SCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEW 379
SCG+ T +T G++Y +G + +G V + P +L D V +V+CG+
Sbjct: 449 SCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGAEVLEPMQL-DFFLSNPVEQVSCGDN 507
Query: 380 HTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDI 439
H +++ + +++++G G +G LG + ++ P++V+ + L + +V CG T +
Sbjct: 508 HVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQS 567
Query: 440 -MVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASC---GRML 495
V C N KL G + H T T F + G+
Sbjct: 568 GKVLACGLNEFN-KLGL-NQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTH 625
Query: 496 TVGLTGLGKVYTMGSAVHGQLGNPKAKDR-SITVVEGKLKEEFVKGISSGSYHVAVLTSG 554
T L G++ T G GQLG K R I ++ G L + V +S G T
Sbjct: 626 TAALDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDD 685
Query: 555 GSVYTWGKNANGQLGL 570
++ WG NG+L +
Sbjct: 686 NHIFAWGNGGNGRLAM 701
Score = 249 (92.7 bits), Expect = 3.9e-17, P = 3.9e-17
Identities = 88/349 (25%), Positives = 154/349 (44%)
Query: 274 AALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECL-SGINVQSVSCGEFQTCALTKS 332
A + ++ EV+ WG GK S P+ ++ + SG + + V G +T
Sbjct: 357 AVVTSRTSEVYVWGGGK------------STPQKLDVIKSGCSARQVCAGNTHFAVVTVE 404
Query: 333 GEIYTWGHNNHGADLVGE--RRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQL 390
E+YTW + G L G+ ++ + K + L G + +V+CG+ T V+ GQL
Sbjct: 405 KELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQL 464
Query: 391 FTYGDGTFGVLGHGNLQN--VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNA 448
+ +G +G +G + V +P +++ V+ V+CG H +++ R K
Sbjct: 465 YAFGSDYYGCMGVDKVAGAEVLEPMQLDFFLSNPVEQVSCGDNHV-----VVLTRNK--- 516
Query: 449 IGGKLFTWGDADKGRLG-----------HVDGERKLLPTCVTRLVDFDFVQASCGRMLTV 497
++++WG + GRLG VD + L+ V D F+ G++L
Sbjct: 517 ---EVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVLAC 573
Query: 498 GLTGLGKV---YTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSG 554
GL K+ M ++ + + S T+ + +L ++ I+ G H A L
Sbjct: 574 GLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAK-QLSFYKIRTIAPGKTHTAALDER 632
Query: 555 GSVYTWGKNANGQLGLGDSQERETPTFVEA-LRDRQVESVVCGSSITAA 602
G + T+G N GQLG+G+ ++R + L +QV V CG T A
Sbjct: 633 GRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIA 681
Score = 197 (74.4 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 76/263 (28%), Positives = 113/263 (42%)
Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQ-VDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
V + EG L G G + +K + L P L+ + V+ +S G H ++T+
Sbjct: 456 VCVTDEGQLYA-FGSDYYGCMGVDKVAGAEVLEPMQLDFFLSNPVEQVSCGDNHVVVLTR 514
Query: 280 EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
EV+ WG G+ GRLG D P+ V+ + + +V CG T LT+SG++ G
Sbjct: 515 NKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACG 574
Query: 340 HNNH---GAD--LVGERRSRS-HWLPRK----LFDTLDGVRVSKVACGEWHTAIVSTSGQ 389
N G + + G + H +P L L ++ +A G+ HTA + G+
Sbjct: 575 LNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAALDERGR 634
Query: 390 LFTYGDGTFGVLGHGNLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCKSNA 448
L T+G G LG GN + + L G +V V+CG T A D N
Sbjct: 635 LLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATD-------DNH 687
Query: 449 IGGKLFTWGDADKGRLGHVDGER 471
I F WG+ GRL ER
Sbjct: 688 I----FAWGNGGNGRLAMTPTER 706
Score = 185 (70.2 bits), Expect = 4.8e-10, Sum P(2) = 4.8e-10
Identities = 70/280 (25%), Positives = 126/280 (45%)
Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG-HKV-NMDVSCPKLVEC 310
PK +E ++ +S G VT EG+++ +G G +G KV +V P ++
Sbjct: 434 PKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGAEVLEPMQLDF 493
Query: 311 LSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR 370
V+ VSCG+ LT++ E+Y+WG +G +G ++ P+K+ D +
Sbjct: 494 FLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGR--LGLDSEEDYYTPQKV-DVPKALI 550
Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTF----------GVLGHGNLQNVSQPKE---VES 417
+ V CG T +++ SG++ G F G++ H V +
Sbjct: 551 IVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQ 610
Query: 418 LRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL-LPT 476
L K++++A G HTAA+ D +R G+L T+G G+LG + +++L +
Sbjct: 611 LSFYKIRTIAPGKTHTAAL-D---ER-------GRLLTFGCNKCGQLGVGNYKKRLGINL 659
Query: 477 CVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
L ++ SCG T+ T ++ G+ +G+L
Sbjct: 660 LGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRL 699
Score = 50 (22.7 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 30/98 (30%), Positives = 43/98 (43%)
Query: 525 SITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEA 584
+I +VE L + ++ SSG +++ T S G + G+ QE ETP
Sbjct: 737 TILIVEKVLNSKTIRSNSSG---LSIGTVVQSSSPGGGSGGGREDDDSQQESETPDPSGG 793
Query: 585 LR-----DRQVESVVCGSSITAAICLHKSISVGDQSSC 617
R DR +E +V S T A+ IS G SSC
Sbjct: 794 FRGTMEADRGMEGLV---SPTEAM----RISSGASSSC 824
>FB|FBgn0002638 [details] [associations]
symbol:Rcc1 "Regulator of chromosome condensation 1 ortholog
(H. sapiens)" species:7227 "Drosophila melanogaster" [GO:0005634
"nucleus" evidence=ISS;NAS;IDA] [GO:0007417 "central nervous system
development" evidence=IDA] [GO:0030261 "chromosome condensation"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=ISS;IDA]
[GO:0007076 "mitotic chromosome condensation" evidence=NAS]
[GO:0005087 "Ran guanyl-nucleotide exchange factor activity"
evidence=ISS;NAS] [GO:0005737 "cytoplasm" evidence=NAS] [GO:0007346
"regulation of mitotic cell cycle" evidence=IDA] [GO:0006607
"NLS-bearing substrate import into nucleus" evidence=IMP]
[GO:0000793 "condensed chromosome" evidence=IDA] [GO:0046822
"regulation of nucleocytoplasmic transport" evidence=IMP]
[GO:0050767 "regulation of neurogenesis" evidence=IMP] [GO:0022008
"neurogenesis" evidence=IMP] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0007346 GO:GO:0005737 EMBL:AE014296
GO:GO:0051301 GO:GO:0007067 GO:GO:0007417 GO:GO:0046822
GO:GO:0003682 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005085 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 GO:GO:0050767 PDB:3MVD PDBsum:3MVD
GeneTree:ENSGT00700000104160 EMBL:X58530 EMBL:AY070540 PIR:S15028
RefSeq:NP_523943.1 RefSeq:NP_729118.1 RefSeq:NP_729119.1
UniGene:Dm.8023 ProteinModelPortal:P25171 SMR:P25171 DIP:DIP-17766N
IntAct:P25171 MINT:MINT-781282 STRING:P25171 PaxDb:P25171
EnsemblMetazoa:FBtr0077074 EnsemblMetazoa:FBtr0077075
EnsemblMetazoa:FBtr0077076 GeneID:38669 KEGG:dme:Dmel_CG10480
CTD:38669 FlyBase:FBgn0002638 InParanoid:P25171 KO:K11493
OMA:PFEAIWA OrthoDB:EOG437PW4 PhylomeDB:P25171 ChiTaRS:Bj1
GenomeRNAi:38669 NextBio:809817 Bgee:P25171 GermOnline:CG10480
Uniprot:P25171
Length = 547
Score = 258 (95.9 bits), Expect = 6.2e-18, Sum P(2) = 6.2e-18
Identities = 100/385 (25%), Positives = 169/385 (43%)
Query: 211 LIERKDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLG 270
L +R+ +L +V++ G G +G +G D + + K +L A + D +IS G
Sbjct: 34 LPKRRTVLGNVLVCGNGDVG-QLGLGED--ILERK--------RLSPVAGIPDAVDISAG 82
Query: 271 AKHAALVTKEGEVFCWGEGKDGRLGHKVNMD--VSCPKLVECLSGINVQSVSCGEFQTCA 328
H ++TK G+++ +G +G LG + D S P L++ L G +S G+ +
Sbjct: 83 GMHNLVLTKSGDIYSFGCNDEGALGRDTSEDGSESKPDLID-LPG-KALCISAGDSHSAC 140
Query: 329 LTKSGEIYTWG-----HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
L + G ++ WG H N G + G +R+ P D ++G +A G H I
Sbjct: 141 LLEDGRVFAWGSFRDSHGNMGLTIDGNKRT-----P---IDLMEGTVCCSIASGADHLVI 192
Query: 384 VSTSGQLFTYG---DGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIM 440
++T+G++FT G G G L ++ + + + LR ++ P+ +
Sbjct: 193 LTTAGKVFTVGCAEQGQLGRLSERSISGEGRRGKRDLLRPTQLIITRAKPFEAIWATNYC 252
Query: 441 VDRCKSNAIGGKLFTWGDADKGRLGH-VDGERKLLPTCVTRLVDFDFVQASCGRMLTVGL 499
+S ++ G + +L H G+ L T L D + G+ TV L
Sbjct: 253 TFMRESQT--QVIWATGLNNFKQLAHETKGKEFALTPIKTELKDIRHIAG--GQHHTVIL 308
Query: 500 TGLGKVYTMGSAVHGQLGNPKAKD--RSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSV 557
T K +G +G+LG KD T+V+ KL E+ V + G +T G +
Sbjct: 309 TTDLKCSVVGRPEYGRLGLGDVKDVVEKPTIVK-KLTEKIVS-VGCGEVCSYAVTIDGKL 366
Query: 558 YTWGKNANGQLGLGDSQERETPTFV 582
Y+WG N QLG+GD + P V
Sbjct: 367 YSWGSGVNNQLGVGDGDDELEPIVV 391
Score = 235 (87.8 bits), Expect = 2.2e-15, Sum P(2) = 2.2e-15
Identities = 100/348 (28%), Positives = 168/348 (48%)
Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGI-NVQSVSCGEFQTCALTKSGEIYTWG 339
G V G G G+LG + D+ K + ++GI + +S G LTKSG+IY++G
Sbjct: 42 GNVLVCGNGDVGQLG--LGEDILERKRLSPVAGIPDAVDISAGGMHNLVLTKSGDIYSFG 99
Query: 340 HNNHGADLVGERRSR--SHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
N+ GA +G S S P L D L G + ++ G+ H+A + G++F +G +
Sbjct: 100 CNDEGA--LGRDTSEDGSESKP-DLID-LPGKALC-ISAGDSHSACLLEDGRVFAWG--S 152
Query: 398 FGVLGHGNLQ-NVSQPKE--VESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLF 454
F HGN+ + K ++ + G S+A G H + GK+F
Sbjct: 153 FRD-SHGNMGLTIDGNKRTPIDLMEGTVCCSIASGADHLVILTT-----------AGKVF 200
Query: 455 TWGDADKGRLGHVD----------GERKLL-PT--CVTRLVDFDFVQAS--CGRMLTVGL 499
T G A++G+LG + G+R LL PT +TR F+ + A+ C +
Sbjct: 201 TVGCAEQGQLGRLSERSISGEGRRGKRDLLRPTQLIITRAKPFEAIWATNYC-TFMRESQ 259
Query: 500 TGLGKVYTMGSAVHGQLGNP-KAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVY 558
T + ++ G QL + K K+ ++T ++ +LK+ ++ I+ G +H +LT+
Sbjct: 260 TQV--IWATGLNNFKQLAHETKGKEFALTPIKTELKD--IRHIAGGQHHTVILTTDLKCS 315
Query: 559 TWGKNANGQLGLGDSQER-ETPTFVEALRDRQVESVVCGSSITAAICL 605
G+ G+LGLGD ++ E PT V+ L ++ V SV CG + A+ +
Sbjct: 316 VVGRPEYGRLGLGDVKDVVEKPTIVKKLTEKIV-SVGCGEVCSYAVTI 362
Score = 41 (19.5 bits), Expect = 6.2e-18, Sum P(2) = 6.2e-18
Identities = 13/32 (40%), Positives = 16/32 (50%)
Query: 938 SGSVEDSKVARTEPQQKGTK-ASKLEYAEQYE 968
SGS SK +T PQ K A ++ EQ E
Sbjct: 431 SGSSSISKKDKTPPQDNVDKEAENVDKQEQKE 462
>UNIPROTKB|F1NXI5 [details] [associations]
symbol:SERGEF "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IEA] [GO:0050709 "negative regulation of
protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005730 GO:GO:0045111
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0050709
GeneTree:ENSGT00700000104160 PANTHER:PTHR22870:SF7
EMBL:AADN02030419 EMBL:AADN02030421 EMBL:AADN02030420
IPI:IPI00682810 Ensembl:ENSGALT00000010072 OMA:PIELDIT
Uniprot:F1NXI5
Length = 382
Score = 245 (91.3 bits), Expect = 7.7e-18, P = 7.7e-18
Identities = 113/380 (29%), Positives = 166/380 (43%)
Query: 249 DALLPKLLE--SAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPK 306
D L+P+LL+ S D+++I+ G H+A++T GE+F G K G+LG DV C
Sbjct: 15 DVLVPQLLKDVSCKCQDIKSIAGGGGHSAVITGAGELFVCGHNKAGQLGLNHTEDVLCFT 74
Query: 307 LVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTL 366
L LSG VQ V+CG T L ++G + + G N G L + S +P+K+ +L
Sbjct: 75 LCTALSGFCVQEVACGWDFTIILGRAGLVLSCGSNAFG-QLGVPQISGPCLIPQKI-KSL 132
Query: 367 DGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSV 426
V +A G H + SG +F +G G + V Q K + K
Sbjct: 133 KEKAVG-IAAGLRHALAATESGLVFQWGTGMAS-----RAKRVHQGKTLPVFWAAKEPCE 186
Query: 427 ACG-PWHTAAIVDIMVDRCKSNAIG-GKLFTWGDADKGRLGHVDGERKLL-PTCV-TRLV 482
G P V + + G G L+ WG G+L V E L+ P + T+
Sbjct: 187 IKGNPGVLLCQVSLSAYLTSLSTAGEGHLYVWGSNKHGQL--VSKEVFLVEPKKIDTQFF 244
Query: 483 DFDFVQAS-CGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA---KDRSITVVEGKL----K 534
+ + A G V T GKV+T G A +GQLG A DR I + + L +
Sbjct: 245 SHEKIGAVWSGWTHLVAQTETGKVFTWGRADYGQLGRHAAVYVADRVIKL-DSFLPCCPQ 303
Query: 535 EEFVKG---------ISSGSYH-VAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEA 584
E K I+ GS H +AV+ G +WG N +G G G P V+A
Sbjct: 304 PEAEKNGNHTILLFQIACGSEHNLAVV--GDCCLSWGWNEHGMCGDGTEANVHVPKPVKA 361
Query: 585 LRDRQVESVVCGSSITAAIC 604
L + + CG+ + A+C
Sbjct: 362 LGYAKQILIGCGAGHSLALC 381
Score = 159 (61.0 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 55/171 (32%), Positives = 80/171 (46%)
Query: 394 GDGTFGVLGHGNLQNVSQPKEVE--SLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
G ++G LG G+ ++V P+ ++ S + +KS+A G H+A I G
Sbjct: 1 GANSYGQLGLGHKEDVLVPQLLKDVSCKCQDIKSIAGGGGHSAVITG-----------AG 49
Query: 452 KLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
+LF G G+LG E L T T L F + +CG T+ L G V + GS
Sbjct: 50 ELFVCGHNKAGQLGLNHTEDVLCFTLCTALSGFCVQEVACGWDFTIILGRAGLVLSCGSN 109
Query: 512 VHGQLGNPKAKDRSITVVEGK-LKEEFVKGISSGSYHVAVLTSGGSVYTWG 561
GQLG P+ + + K LKE+ V GI++G H T G V+ WG
Sbjct: 110 AFGQLGVPQISGPCLIPQKIKSLKEKAV-GIAAGLRHALAATESGLVFQWG 159
>ZFIN|ZDB-GENE-070402-2 [details] [associations]
symbol:als2a "amyotrophic lateral sclerosis 2a
(juvenile)" species:7955 "Danio rerio" [GO:0035023 "regulation of
Rho protein signal transduction" evidence=IEA] [GO:0005089 "Rho
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0043025 "neuronal
cell body" evidence=ISS] [GO:0030425 "dendrite" evidence=ISS]
[GO:0005769 "early endosome" evidence=ISS] [GO:0016197 "endosomal
transport" evidence=ISS] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=ISS] [GO:0005813 "centrosome" evidence=ISS]
[GO:0014069 "postsynaptic density" evidence=ISS] [GO:0007528
"neuromuscular junction development" evidence=ISS] [GO:0030424
"axon" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0043197 "dendritic spine" evidence=ISS] [GO:0007409
"axonogenesis" evidence=ISS] [GO:0016050 "vesicle organization"
evidence=ISS] [GO:0017137 "Rab GTPase binding" evidence=ISS]
[GO:0017112 "Rab guanyl-nucleotide exchange factor activity"
evidence=ISS] InterPro:IPR000219 Pfam:PF00621 PROSITE:PS50010
INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204 ZFIN:ZDB-GENE-070402-2
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0005622 GO:GO:0005089
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023 InterPro:IPR003409
InterPro:IPR003123 Pfam:PF02493 SMART:SM00698 PROSITE:PS51205
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:BK005193
UniGene:Dr.102729 ProteinModelPortal:I7L9G3 Uniprot:I7L9G3
Length = 1590
Score = 190 (71.9 bits), Expect = 9.5e-18, Sum P(2) = 9.5e-18
Identities = 62/193 (32%), Positives = 98/193 (50%)
Query: 254 KLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSG 313
KLL S +L + +LG+ H L+ + G+V+ +GE + V + L LSG
Sbjct: 27 KLLLSRPVL---HAALGSLHGLLLIEGGQVYSFGE----QPWKPVEPPPASLVLESTLSG 79
Query: 314 INVQSVSCGEFQTCALTKSGEIYTWGHNNHG-ADLVGERRSRSHWLPRKLFDTLDG---- 368
+V SVS G + A+T+ G + WG N++G + G R S P + D
Sbjct: 80 QHVISVSAGSYHCSAVTEDGLVLMWGENSYGQCGVSGTDRVPSP-TPVTVVDDETHPPQL 138
Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGT-FGVLGHGNLQNVSQPKEVESLRGLKVKSVA 427
VRV VACG HT +S +++ +G G G++ N+ V +P++VE L G V +A
Sbjct: 139 VRVLNVACGAQHTLALSNKHEVWAWGSGCQLGLVT--NVFPVWKPQKVEHLVGRYVVQIA 196
Query: 428 CGPWHTAAIVDIM 440
CG +H+ A+V +
Sbjct: 197 CGAFHSLALVQFL 209
Score = 143 (55.4 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 35/104 (33%), Positives = 55/104 (52%)
Query: 282 EVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
EV+ WG+G +G+LGH + P ++ LS V ++ G + ALT ++Y+WG
Sbjct: 521 EVWSWGKGHEGQLGHGDYLPRLQPLCIKSLSKKEVVKITAGANHSLALTAQCQVYSWGSE 580
Query: 342 NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVS 385
G +G S S +P L DG+RV VA G+ HT +++
Sbjct: 581 KFGQ--LGRMNSPST-VPN-LTTVSDGIRVWDVAAGQTHTLLLA 620
Score = 124 (48.7 bits), Expect = 9.5e-18, Sum P(2) = 9.5e-18
Identities = 31/105 (29%), Positives = 55/105 (52%)
Query: 452 KLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
++++WG +G+LGH D +L P C+ L + V+ + G ++ LT +VY+ GS
Sbjct: 521 EVWSWGKGHEGQLGHGDYLPRLQPLCIKSLSKKEVVKITAGANHSLALTAQCQVYSWGSE 580
Query: 512 VHGQLG--NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSG 554
GQLG N + ++T V ++ V +++G H +L G
Sbjct: 581 KFGQLGRMNSPSTVPNLTTVSDGIR---VWDVAAGQTHTLLLADG 622
Score = 94 (38.1 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 30/98 (30%), Positives = 46/98 (46%)
Query: 504 KVYTMGSAVHGQLGNPKAKDRSITV-VEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGK 562
+V++ G GQLG+ R + ++ K+E VK I++G+ H LT+ VY+WG
Sbjct: 521 EVWSWGKGHEGQLGHGDYLPRLQPLCIKSLSKKEVVK-ITAGANHSLALTAQCQVYSWGS 579
Query: 563 NANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSIT 600
GQLG +S P +V V G + T
Sbjct: 580 EKFGQLGRMNSPST-VPNLTTVSDGIRVWDVAAGQTHT 616
Score = 84 (34.6 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 16/47 (34%), Positives = 28/47 (59%)
Query: 557 VYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
V++WGK GQLG GD R P +++L ++V + G++ + A+
Sbjct: 522 VWSWGKGHEGQLGHGDYLPRLQPLCIKSLSKKEVVKITAGANHSLAL 568
Score = 48 (22.0 bits), Expect = 7.2e-10, Sum P(2) = 7.2e-10
Identities = 16/57 (28%), Positives = 27/57 (47%)
Query: 695 LQGSLSEEVKEEKGALTPSRGQSFT----SKQSRNVERKPGE-CLESASSLSSGLQR 746
L +L+E+ G+ PSR S T S+QS + +P L S++S ++
Sbjct: 340 LDQTLAEQATSAGGSHPPSRQSSLTCPFGSEQSDELTLRPSSPALSRTDSITSSARK 396
>UNIPROTKB|F1S2Q4 [details] [associations]
symbol:NEK9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PROSITE:PS50012 GeneTree:ENSGT00700000104074 OMA:GCDGTFL
EMBL:CT737372 Ensembl:ENSSSCT00000002648 Uniprot:F1S2Q4
Length = 1004
Score = 254 (94.5 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 82/316 (25%), Positives = 138/316 (43%)
Query: 265 QNISLGAKHAALVTKEGEVFCW-----GEGKDGRLGHKVNMDVSCPKLVECLSGINVQSV 319
+ + G H A+VT E E++ W G G+LGH PK VE L G ++ V
Sbjct: 391 RQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQV 450
Query: 320 SCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEW 379
SCG+ T +T G++Y +G + +G V + P +L + V +V+CG+
Sbjct: 451 SCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQL-NFFSNNPVEQVSCGDN 509
Query: 380 HTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDI 439
H +++ + +++++G G +G LG + ++ P++V+ + L + +V CG T +
Sbjct: 510 HVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQS 569
Query: 440 -MVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ---ASCGRML 495
V C N KL G + H T T F + + G+
Sbjct: 570 GKVLACGLNEFN-KLGL-NQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTVAPGKTH 627
Query: 496 TVGLTGLGKVYTMGSAVHGQLGNPKAKDR-SITVVEGKLKEEFVKGISSGSYHVAVLTSG 554
T + G++ T G GQLG K R I ++ G L + V +S G T
Sbjct: 628 TAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDD 687
Query: 555 GSVYTWGKNANGQLGL 570
++ WG NG+L +
Sbjct: 688 NHIFAWGNGGNGRLAM 703
Score = 245 (91.3 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 86/349 (24%), Positives = 153/349 (43%)
Query: 274 AALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECL-SGINVQSVSCGEFQTCALTKS 332
A + ++ EV+ WG GK S P+ ++ + SG + + V G +T
Sbjct: 359 AVVTSRTSEVYVWGGGK------------STPQKLDVIKSGCSARQVCAGNTHFAVVTVE 406
Query: 333 GEIYTWGHNNHGADLVGE--RRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQL 390
E+YTW + G L G+ ++ + K + L G + +V+CG+ T V+ GQL
Sbjct: 407 KELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQL 466
Query: 391 FTYGDGTFGVLGHGNLQN--VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNA 448
+ +G +G +G + V +P ++ V+ V+CG H +++ R K
Sbjct: 467 YAFGSDYYGCMGVDKVAGPEVLEPMQLNFFSNNPVEQVSCGDNHV-----VVLTRNK--- 518
Query: 449 IGGKLFTWGDADKGRLG-----------HVDGERKLLPTCVTRLVDFDFVQASCGRMLTV 497
++++WG + GRLG VD + L+ V D F+ G++L
Sbjct: 519 ---EVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVLAC 575
Query: 498 GLTGLGKV---YTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSG 554
GL K+ M ++ + + S T+ + +L ++ ++ G H A +
Sbjct: 576 GLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAK-QLSFYKIRTVAPGKTHTAAIDER 634
Query: 555 GSVYTWGKNANGQLGLGDSQERETPTFVEA-LRDRQVESVVCGSSITAA 602
G + T+G N GQLG+G+ ++R + L +QV V CG T A
Sbjct: 635 GRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIA 683
Score = 192 (72.6 bits), Expect = 7.0e-11, Sum P(2) = 7.0e-11
Identities = 77/263 (29%), Positives = 111/263 (42%)
Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQ-VDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
V + EG L G G + +K + L P L V+ +S G H ++T+
Sbjct: 458 VCVTDEGQLYA-FGSDYYGCMGVDKVAGPEVLEPMQLNFFSNNPVEQVSCGDNHVVVLTR 516
Query: 280 EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
EV+ WG G+ GRLG D P+ V+ + + +V CG T LT+SG++ G
Sbjct: 517 NKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACG 576
Query: 340 HNNH---GAD--LVGERRSRS-HWLPRK----LFDTLDGVRVSKVACGEWHTAIVSTSGQ 389
N G + + G + H +P L L ++ VA G+ HTA + G+
Sbjct: 577 LNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTVAPGKTHTAAIDERGR 636
Query: 390 LFTYGDGTFGVLGHGNLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCKSNA 448
L T+G G LG GN + + L G +V V+CG T A D N
Sbjct: 637 LLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATD-------DNH 689
Query: 449 IGGKLFTWGDADKGRLGHVDGER 471
I F WG+ GRL ER
Sbjct: 690 I----FAWGNGGNGRLAMTPTER 708
Score = 191 (72.3 bits), Expect = 8.9e-11, Sum P(2) = 8.9e-11
Identities = 73/280 (26%), Positives = 126/280 (45%)
Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG-HKV-NMDVSCPKLVEC 310
PK +E ++ +S G VT EG+++ +G G +G KV +V P +
Sbjct: 436 PKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNF 495
Query: 311 LSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR 370
S V+ VSCG+ LT++ E+Y+WG +G +G ++ P+K+ D +
Sbjct: 496 FSNNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGR--LGLDSEEDYYTPQKV-DVPKALI 552
Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTF----------GVLGHGNLQNVSQPKE---VES 417
+ V CG T +++ SG++ G F G++ H V +
Sbjct: 553 IVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQ 612
Query: 418 LRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL-LPT 476
L K+++VA G HTAAI D +R G+L T+G G+LG + +++L +
Sbjct: 613 LSFYKIRTVAPGKTHTAAI-D---ER-------GRLLTFGCNKCGQLGVGNYKKRLGINL 661
Query: 477 CVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
L ++ SCG T+ T ++ G+ +G+L
Sbjct: 662 LGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRL 701
Score = 125 (49.1 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 47/165 (28%), Positives = 78/165 (47%)
Query: 296 HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRS 355
H+V S L + LS +++V+ G+ T A+ + G + T+G N G VG + R
Sbjct: 599 HEVPYTTSFT-LAKQLSFYKIRTVAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRL 657
Query: 356 HWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLG-------HGNLQN 408
L L G +V +V+CG+ T + +F +G+G G L HG+
Sbjct: 658 GI--NLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDIC 715
Query: 409 VSQPKEV-ESLRGLKVKSVACGPWHTAAIVDIMVDR--CKSNAIG 450
S P+ + SL V ++C WHT IV+ +++ +SN+ G
Sbjct: 716 TSWPRPIFGSLH--HVPDLSCRGWHTILIVEKVLNSKTIRSNSSG 758
Score = 51 (23.0 bits), Expect = 7.0e-11, Sum P(2) = 7.0e-11
Identities = 35/102 (34%), Positives = 45/102 (44%)
Query: 525 SITVVEGKLKEEFVKGISSG-SYHVAVLTS--GGSVYTWGKNANGQLGLGDS-QERETPT 580
+I +VE L + ++ SSG S V +S GG G G+ DS QE ETP
Sbjct: 739 TILIVEKVLNSKTIRSNSSGLSIGTVVQSSSPGGGGGGGGGGGGGEEE--DSRQESETPD 796
Query: 581 FVEALR-----DRQVESVVCGSSITAAICLHKSISVGDQSSC 617
R DR +E +V S T A+ IS G SSC
Sbjct: 797 PSGGFRGTMEADRGMEGLV---SPTEAM----RISSGASSSC 831
>UNIPROTKB|E2QYP0 [details] [associations]
symbol:NEK9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0019901 "protein kinase binding"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] InterPro:IPR000719
InterPro:IPR002290 InterPro:IPR008271 InterPro:IPR011009
Pfam:PF00069 PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS50012 KO:K08857
GeneTree:ENSGT00700000104074 CTD:91754 OMA:GCDGTFL
EMBL:AAEX03005855 RefSeq:XP_547912.3 Ensembl:ENSCAFT00000026967
GeneID:490790 KEGG:cfa:490790 NextBio:20863745 Uniprot:E2QYP0
Length = 976
Score = 253 (94.1 bits), Expect = 1.4e-17, P = 1.4e-17
Identities = 83/316 (26%), Positives = 138/316 (43%)
Query: 265 QNISLGAKHAALVTKEGEVFCW-----GEGKDGRLGHKVNMDVSCPKLVECLSGINVQSV 319
+ + G H A+VT E E++ W G G+LGH PK VE L G ++ V
Sbjct: 372 RQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQV 431
Query: 320 SCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEW 379
SCG+ T +T G++Y +G + +G V + P +L L+ V +V+CG+
Sbjct: 432 SCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFFLNNP-VEQVSCGDN 490
Query: 380 HTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDI 439
H +++ + +++++G G +G LG + ++ P++V+ + L + +V CG T +
Sbjct: 491 HVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQS 550
Query: 440 -MVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASC---GRML 495
V C N KL G + H T T F + G+
Sbjct: 551 GKVLACGLNEFN-KLGL-NQCMSGIINHEAYHEIPYTTSFTLAKQLSFYKIRTIAPGKTH 608
Query: 496 TVGLTGLGKVYTMGSAVHGQLGNPKAKDR-SITVVEGKLKEEFVKGISSGSYHVAVLTSG 554
T + G++ T G GQLG K R I ++ G L + V +S G T
Sbjct: 609 TAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDD 668
Query: 555 GSVYTWGKNANGQLGL 570
++ WG NG+L +
Sbjct: 669 NHIFAWGNGGNGRLAM 684
Score = 244 (91.0 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 87/349 (24%), Positives = 153/349 (43%)
Query: 274 AALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECL-SGINVQSVSCGEFQTCALTKS 332
A + ++ EV+ WG GK S P+ ++ + SG + + V G +T
Sbjct: 340 AVVTSRTSEVYVWGGGK------------STPQKLDVIKSGCSARQVCAGNTHFAVVTVE 387
Query: 333 GEIYTWGHNNHGADLVGE--RRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQL 390
E+YTW + G L G+ ++ + K + L G + +V+CG+ T V+ GQL
Sbjct: 388 KELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQL 447
Query: 391 FTYGDGTFGVLGHGNLQN--VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNA 448
+ +G +G +G + V +P ++ V+ V+CG H +++ R K
Sbjct: 448 YAFGSDYYGCMGVDKVAGPEVLEPMQLNFFLNNPVEQVSCGDNHV-----VVLTRNK--- 499
Query: 449 IGGKLFTWGDADKGRLG-----------HVDGERKLLPTCVTRLVDFDFVQASCGRMLTV 497
++++WG + GRLG VD + L+ V D F+ G++L
Sbjct: 500 ---EVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVLAC 556
Query: 498 GLTGLGKV---YTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSG 554
GL K+ M ++ + + S T+ + +L ++ I+ G H A +
Sbjct: 557 GLNEFNKLGLNQCMSGIINHEAYHEIPYTTSFTLAK-QLSFYKIRTIAPGKTHTAAIDER 615
Query: 555 GSVYTWGKNANGQLGLGDSQERETPTFVEA-LRDRQVESVVCGSSITAA 602
G + T+G N GQLG+G+ ++R + L +QV V CG T A
Sbjct: 616 GRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIA 664
Score = 195 (73.7 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 76/263 (28%), Positives = 112/263 (42%)
Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQ-VDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
V + EG L G G + +K + L P L + V+ +S G H ++T+
Sbjct: 439 VCVTDEGQLYA-FGSDYYGCMGVDKVAGPEVLEPMQLNFFLNNPVEQVSCGDNHVVVLTR 497
Query: 280 EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
EV+ WG G+ GRLG D P+ V+ + + +V CG T LT+SG++ G
Sbjct: 498 NKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACG 557
Query: 340 HNNH---GAD--LVGERRSRS-HWLPRK----LFDTLDGVRVSKVACGEWHTAIVSTSGQ 389
N G + + G + H +P L L ++ +A G+ HTA + G+
Sbjct: 558 LNEFNKLGLNQCMSGIINHEAYHEIPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGR 617
Query: 390 LFTYGDGTFGVLGHGNLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCKSNA 448
L T+G G LG GN + + L G +V V+CG T A D N
Sbjct: 618 LLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATD-------DNH 670
Query: 449 IGGKLFTWGDADKGRLGHVDGER 471
I F WG+ GRL ER
Sbjct: 671 I----FAWGNGGNGRLAMTPTER 689
Score = 183 (69.5 bits), Expect = 4.8e-10, P = 4.8e-10
Identities = 70/280 (25%), Positives = 125/280 (44%)
Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG-HKV-NMDVSCPKLVEC 310
PK +E ++ +S G VT EG+++ +G G +G KV +V P +
Sbjct: 417 PKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNF 476
Query: 311 LSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR 370
V+ VSCG+ LT++ E+Y+WG +G +G ++ P+K+ D +
Sbjct: 477 FLNNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGR--LGLDSEEDYYTPQKV-DVPKALI 533
Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTF----------GVLGHGNLQNVSQPKE---VES 417
+ V CG T +++ SG++ G F G++ H + +
Sbjct: 534 IVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEIPYTTSFTLAKQ 593
Query: 418 LRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL-LPT 476
L K++++A G HTAAI D +R G+L T+G G+LG + +++L +
Sbjct: 594 LSFYKIRTIAPGKTHTAAI-D---ER-------GRLLTFGCNKCGQLGVGNYKKRLGINL 642
Query: 477 CVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
L ++ SCG T+ T ++ G+ +G+L
Sbjct: 643 LGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRL 682
>UNIPROTKB|Q8TD19 [details] [associations]
symbol:NEK9 "Serine/threonine-protein kinase Nek9"
species:9606 "Homo sapiens" [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005739 "mitochondrion" evidence=IDA]
InterPro:IPR000719 InterPro:IPR002290 InterPro:IPR008271
InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0051301
GO:GO:0007067 GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112
GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
EMBL:AC007055 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
KO:K08857 CleanEx:HS_NEK8 EMBL:AY048580 EMBL:AY080896 EMBL:AB082526
EMBL:BC009336 EMBL:BC093881 EMBL:BC112101 IPI:IPI00301609
RefSeq:NP_149107.4 UniGene:Hs.7200 ProteinModelPortal:Q8TD19
SMR:Q8TD19 IntAct:Q8TD19 MINT:MINT-2984282 STRING:Q8TD19
PhosphoSite:Q8TD19 DMDM:116242675 PaxDb:Q8TD19 PeptideAtlas:Q8TD19
PRIDE:Q8TD19 DNASU:91754 Ensembl:ENST00000238616 GeneID:91754
KEGG:hsa:91754 UCSC:uc001xrl.3 CTD:91754 GeneCards:GC14M075548
HGNC:HGNC:18591 HPA:HPA001405 MIM:609798 neXtProt:NX_Q8TD19
PharmGKB:PA38593 HOVERGEN:HBG039572 InParanoid:Q8TD19 OMA:GCDGTFL
OrthoDB:EOG4NZTSM PhylomeDB:Q8TD19 BindingDB:Q8TD19
ChEMBL:CHEMBL5257 GenomeRNAi:91754 NextBio:77443
ArrayExpress:Q8TD19 Bgee:Q8TD19 CleanEx:HS_NEK9
Genevestigator:Q8TD19 GermOnline:ENSG00000119638 Uniprot:Q8TD19
Length = 979
Score = 253 (94.1 bits), Expect = 1.4e-17, P = 1.4e-17
Identities = 83/316 (26%), Positives = 137/316 (43%)
Query: 265 QNISLGAKHAALVTKEGEVFCW-----GEGKDGRLGHKVNMDVSCPKLVECLSGINVQSV 319
+ + G H A+VT E E++ W G G+LGH PK VE L G ++ V
Sbjct: 372 RQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQV 431
Query: 320 SCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEW 379
SCG+ T +T G++Y +G + +G V + P +L L V +V+CG+
Sbjct: 432 SCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFFLSNP-VEQVSCGDN 490
Query: 380 HTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDI 439
H +++ + +++++G G +G LG + ++ P++V+ + L + +V CG T +
Sbjct: 491 HVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQS 550
Query: 440 -MVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASC---GRML 495
V C N KL G + H T T F + G+
Sbjct: 551 GKVLACGLNEFN-KLGL-NQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTH 608
Query: 496 TVGLTGLGKVYTMGSAVHGQLGNPKAKDR-SITVVEGKLKEEFVKGISSGSYHVAVLTSG 554
T + G++ T G GQLG K R I ++ G L + V +S G T
Sbjct: 609 TAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDD 668
Query: 555 GSVYTWGKNANGQLGL 570
++ WG NG+L +
Sbjct: 669 NHIFAWGNGGNGRLAM 684
Score = 245 (91.3 bits), Expect = 1.0e-16, P = 1.0e-16
Identities = 87/349 (24%), Positives = 153/349 (43%)
Query: 274 AALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECL-SGINVQSVSCGEFQTCALTKS 332
A + ++ EV+ WG GK S P+ ++ + SG + + V G +T
Sbjct: 340 AVVTSRTSEVYVWGGGK------------STPQKLDVIKSGCSARQVCAGNTHFAVVTVE 387
Query: 333 GEIYTWGHNNHGADLVGE--RRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQL 390
E+YTW + G L G+ ++ + K + L G + +V+CG+ T V+ GQL
Sbjct: 388 KELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQL 447
Query: 391 FTYGDGTFGVLGHGNLQN--VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNA 448
+ +G +G +G + V +P ++ V+ V+CG H +++ R K
Sbjct: 448 YAFGSDYYGCMGVDKVAGPEVLEPMQLNFFLSNPVEQVSCGDNHV-----VVLTRNK--- 499
Query: 449 IGGKLFTWGDADKGRLG-----------HVDGERKLLPTCVTRLVDFDFVQASCGRMLTV 497
++++WG + GRLG VD + L+ V D F+ G++L
Sbjct: 500 ---EVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVLAC 556
Query: 498 GLTGLGKV---YTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSG 554
GL K+ M ++ + + S T+ + +L ++ I+ G H A +
Sbjct: 557 GLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAK-QLSFYKIRTIAPGKTHTAAIDER 615
Query: 555 GSVYTWGKNANGQLGLGDSQERETPTFVEA-LRDRQVESVVCGSSITAA 602
G + T+G N GQLG+G+ ++R + L +QV V CG T A
Sbjct: 616 GRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIA 664
Score = 195 (73.7 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 76/263 (28%), Positives = 112/263 (42%)
Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQ-VDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
V + EG L G G + +K + L P L + V+ +S G H ++T+
Sbjct: 439 VCVTDEGQLYA-FGSDYYGCMGVDKVAGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTR 497
Query: 280 EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
EV+ WG G+ GRLG D P+ V+ + + +V CG T LT+SG++ G
Sbjct: 498 NKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACG 557
Query: 340 HNNH---GAD--LVGERRSRS-HWLPRK----LFDTLDGVRVSKVACGEWHTAIVSTSGQ 389
N G + + G + H +P L L ++ +A G+ HTA + G+
Sbjct: 558 LNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGR 617
Query: 390 LFTYGDGTFGVLGHGNLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCKSNA 448
L T+G G LG GN + + L G +V V+CG T A D N
Sbjct: 618 LLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATD-------DNH 670
Query: 449 IGGKLFTWGDADKGRLGHVDGER 471
I F WG+ GRL ER
Sbjct: 671 I----FAWGNGGNGRLAMTPTER 689
Score = 184 (69.8 bits), Expect = 3.8e-10, P = 3.8e-10
Identities = 71/280 (25%), Positives = 125/280 (44%)
Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG-HKV-NMDVSCPKLVEC 310
PK +E ++ +S G VT EG+++ +G G +G KV +V P +
Sbjct: 417 PKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNF 476
Query: 311 LSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR 370
V+ VSCG+ LT++ E+Y+WG +G +G ++ P+K+ D +
Sbjct: 477 FLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGR--LGLDSEEDYYTPQKV-DVPKALI 533
Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTF----------GVLGHGNLQNVSQPKE---VES 417
+ V CG T +++ SG++ G F G++ H V +
Sbjct: 534 IVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQ 593
Query: 418 LRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL-LPT 476
L K++++A G HTAAI D +R G+L T+G G+LG + +++L +
Sbjct: 594 LSFYKIRTIAPGKTHTAAI-D---ER-------GRLLTFGCNKCGQLGVGNYKKRLGINL 642
Query: 477 CVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
L ++ SCG T+ T ++ G+ +G+L
Sbjct: 643 LGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRL 682
>FB|FBgn0045980 [details] [associations]
symbol:niki "nimA-like kinase" species:7227 "Drosophila
melanogaster" [GO:0004702 "receptor signaling protein
serine/threonine kinase activity" evidence=ISS;NAS] [GO:0006468
"protein phosphorylation" evidence=IEA;NAS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0048812 "neuron projection
morphogenesis" evidence=IMP] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE014297
GO:GO:0005524 eggNOG:COG0515 SUPFAM:SSF56112 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004702 HSSP:O14965
PRINTS:PR00633 PROSITE:PS50012 KO:K08857
GeneTree:ENSGT00700000104137 RefSeq:NP_651293.1 UniGene:Dm.27397
ProteinModelPortal:Q9VC32 SMR:Q9VC32 PRIDE:Q9VC32
EnsemblMetazoa:FBtr0084737 GeneID:42959 KEGG:dme:Dmel_CG10951
UCSC:CG10951-RA CTD:42959 FlyBase:FBgn0045980 InParanoid:Q9VC32
OMA:WRHYPTK OrthoDB:EOG4FJ6QP PhylomeDB:Q9VC32 GenomeRNAi:42959
NextBio:831528 ArrayExpress:Q9VC32 Bgee:Q9VC32 Uniprot:Q9VC32
Length = 841
Score = 251 (93.4 bits), Expect = 1.8e-17, P = 1.8e-17
Identities = 89/325 (27%), Positives = 144/325 (44%)
Query: 254 KLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG-HKVNMDVSCPKLVECLS 312
+L AV++DV ++ H +V ++G + WGEG G+LG + P +E +
Sbjct: 447 QLPPKAVIVDV---AMSDSHFVVVNEDGSAYAWGEGTHGQLGLTALEAWKHYPSRMESVR 503
Query: 313 GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVS 372
+V S G+ T +T++G + + G N H A +G+ R++ P KL L VRV
Sbjct: 504 NYHVVSACAGDGFTILVTQAGSLLSCGSNAHLA--LGQDEQRNYHSP-KLIARLADVRVE 560
Query: 373 KVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQ-PKEVESLRGLKVK--SVACG 429
+VA G H +S G ++ +G T G LG GN Q + P+++ L +K K + CG
Sbjct: 561 QVAAGLQHVLALSREGAVYVWGTSTCGALGLGNYQQQQKFPQKI-LLSHVKTKPSKIYCG 619
Query: 430 PWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRL-VDFDFVQ 488
P T+A++ +N G+L G D +LG +R T ++ + Q
Sbjct: 620 P-DTSAVLF-------AN---GELHVCGSNDYNKLGF---QRSAKITAFKKVQLPHKVTQ 665
Query: 489 ASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHV 548
A +V L G VYTMG GQ G + +K ++ +
Sbjct: 666 ACFSSTHSVFLVEGGYVYTMGRNAEGQRGIRHCNSVDHPTLVDSVKSRYIVKANCSDQCT 725
Query: 549 AVLTSGGSVYTWGKNANGQLGLGDS 573
V + + WG NG G+G +
Sbjct: 726 IVASEDNIITVWGTR-NGLPGIGST 749
Score = 215 (80.7 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 69/288 (23%), Positives = 121/288 (42%)
Query: 316 VQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVA 375
+ V+ + + + G Y WG HG + + H+ P ++ +++ V
Sbjct: 454 IVDVAMSDSHFVVVNEDGSAYAWGEGTHGQLGLTALEAWKHY-PSRM-ESVRNYHVVSAC 511
Query: 376 CGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAA 435
G+ T +V+ +G L + G LG +N PK + L ++V+ VA G H A
Sbjct: 512 AGDGFTILVTQAGSLLSCGSNAHLALGQDEQRNYHSPKLIARLADVRVEQVAAGLQHVLA 571
Query: 436 IVDIMVDRCKSNAIGGKLFTWGDADKGRLG--HVDGERKLLPTCVTRLVDFDFVQASCGR 493
+ + G ++ WG + G LG + ++K + V + CG
Sbjct: 572 L-----------SREGAVYVWGTSTCGALGLGNYQQQQKFPQKILLSHVKTKPSKIYCGP 620
Query: 494 MLTVGLTGLGKVYTMGSAVHGQLGNPK-AKDRSITVVEGKLKEEFVKGISSGSYHVAVLT 552
+ L G+++ GS + +LG + AK + V+ L + + S S H L
Sbjct: 621 DTSAVLFANGELHVCGSNDYNKLGFQRSAKITAFKKVQ--LPHKVTQACFS-STHSVFLV 677
Query: 553 SGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSIT 600
GG VYT G+NA GQ G+ + PT V++++ R + C T
Sbjct: 678 EGGYVYTMGRNAEGQRGIRHCNSVDHPTLVDSVKSRYIVKANCSDQCT 725
Score = 174 (66.3 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 60/247 (24%), Positives = 105/247 (42%)
Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
P +ES V + G LVT+ G + G LG + PKL+ L+
Sbjct: 496 PSRMESVRNYHVVSACAGDGFTILVTQAGSLLSCGSNAHLALGQDEQRNYHSPKLIARLA 555
Query: 313 GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVS 372
+ V+ V+ G AL++ G +Y WG + GA +G + + + P+K+ + + S
Sbjct: 556 DVRVEQVAAGLQHVLALSREGAVYVWGTSTCGALGLGNYQQQQKF-PQKILLSHVKTKPS 614
Query: 373 KVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWH 432
K+ CG +A++ +G+L G + LG ++ K+V+ KV H
Sbjct: 615 KIYCGPDTSAVLFANGELHVCGSNDYNKLGFQRSAKITAFKKVQLPH--KVTQACFSSTH 672
Query: 433 TAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG--HVDGERKLLPTCVTRLVDFDFVQAS 490
+ +V+ GG ++T G +G+ G H + PT V + V+A+
Sbjct: 673 SVFLVE-----------GGYVYTMGRNAEGQRGIRHCNSVDH--PTLVDSVKSRYIVKAN 719
Query: 491 CGRMLTV 497
C T+
Sbjct: 720 CSDQCTI 726
Score = 166 (63.5 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 47/183 (25%), Positives = 86/183 (46%)
Query: 434 AAIVDIMVDRCKSNAIG--GKLFTWGDADKGRLGHVDGER-KLLPTCVTRLVDFDFVQAS 490
A IVD+ + + G + WG+ G+LG E K P+ + + ++ V A
Sbjct: 452 AVIVDVAMSDSHFVVVNEDGSAYAWGEGTHGQLGLTALEAWKHYPSRMESVRNYHVVSAC 511
Query: 491 CGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAV 550
G T+ +T G + + GS H LG + ++ + +L + V+ +++G HV
Sbjct: 512 AGDGFTILVTQAGSLLSCGSNAHLALGQDEQRNYHSPKLIARLADVRVEQVAAGLQHVLA 571
Query: 551 LTSGGSVYTWGKNANGQLGLGDSQERET-PTFVEALRDRQVES-VVCGSSITAAICLHKS 608
L+ G+VY WG + G LGLG+ Q+++ P + + S + CG +A + +
Sbjct: 572 LSREGAVYVWGTSTCGALGLGNYQQQQKFPQKILLSHVKTKPSKIYCGPDTSAVLFANGE 631
Query: 609 ISV 611
+ V
Sbjct: 632 LHV 634
>UNIPROTKB|Q74DR4 [details] [associations]
symbol:GSU1251 "ATS1 domain repeat protein" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
Gene3D:2.60.40.360 InterPro:IPR008962 InterPro:IPR011040
SUPFAM:SSF50939 RefSeq:NP_952304.1 ProteinModelPortal:Q74DR4
GeneID:2688149 KEGG:gsu:GSU1251 PATRIC:22025273
HOGENOM:HOG000144307 OMA:QADGTLW
BioCyc:GSUL243231:GH27-1279-MONOMER Uniprot:Q74DR4
Length = 2082
Score = 254 (94.5 bits), Expect = 3.0e-17, P = 3.0e-17
Identities = 88/330 (26%), Positives = 147/330 (44%)
Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
V +++ G H + +G ++ G + G+LG ++ + P V G ++V+ G
Sbjct: 34 VPHVAAGGNHVLTLRSDGTLWAAGSNQFGQLGDGTGINRTSPVQVP---G-TWKTVAAGT 89
Query: 324 FQTCALTKSGEIYTWGHN---NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWH 380
+ + G ++ WG N G LV + + + + P ++ D V VS GE
Sbjct: 90 THSLGIKADGSLWAWGSNLFGQLGQPLVNGQLATNKFSPIRIGTGNDWVAVS---AGELT 146
Query: 381 TAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEV--ESLRGLKVKSVACGPWHTAAIVD 438
+ + G L+++G+ FG LG G + QP +V + L + +VA G H A+
Sbjct: 147 SFGLKGDGTLWSWGNNLFGELGDGTTVSRPQPVQVVADPLSNGRYVAVAAGGEHALAL-- 204
Query: 439 IMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLV--DFDFVQASCGRMLT 496
D G L+ WG G+LG G +LP + D D+ S G M +
Sbjct: 205 -QAD--------GTLWAWGANLTGQLG--TGGTGILPNPTPLKIGTDRDWTAISAGEMHS 253
Query: 497 VGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLK--EEFVKGISSGSYHVAVLTSG 554
V L G +++ G + G+LGN A + ++ ++V I++G+ H L
Sbjct: 254 VALKADGSLWSWGQNLFGELGNGVALPGANVTTPTRVGTGSDWV-AIAAGALHTVALHRN 312
Query: 555 GSVYTWGKNANGQLGLGDSQERETPTFVEA 584
G+V WG NA G +G G R TPT + A
Sbjct: 313 GTVSAWGNNAQGAVGDGTVANRSTPTLIVA 342
Score = 230 (86.0 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 76/315 (24%), Positives = 139/315 (44%)
Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQT 326
++ G +HA + +G ++ WG G+LG + P ++ + + ++S GE +
Sbjct: 194 VAAGGEHALALQADGTLWAWGANLTGQLGTGGTGILPNPTPLKIGTDRDWTAISAGEMHS 253
Query: 327 CALTKSGEIYTWGHNNHGADLVGERRSRSH-WLPRKLFDTLDGVRVSKVACGEWHTAIVS 385
AL G +++WG N G G ++ P ++ D V + A G HT +
Sbjct: 254 VALKADGSLWSWGQNLFGELGNGVALPGANVTTPTRVGTGSDWVAI---AAGALHTVALH 310
Query: 386 TSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCK 445
+G + +G+ G +G G + N S P + + L V +VA T ++ +
Sbjct: 311 RNGTVSAWGNNAQGAVGDGTVANRSTPTLIVAPVTL-VNNVAIAAG-TGVSFSVLAN--- 365
Query: 446 SNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKV 505
G +F WG G+LG+ PT ++ ++ G ++GL G +
Sbjct: 366 -----GTVFGWGGNGAGQLGNGTFGAVTAPTVLSAGASA-WLGVEPGGAFSLGLRSNGTL 419
Query: 506 YTMGSAVHGQLGNPKAKDRSITV-VEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNA 564
+ G GQLG+ +I V V G + ++G+ H + + G+++ WG N+
Sbjct: 420 WAWGGNASGQLGDGTTTPSAIPVPVVGGAGNW--RTTATGTAHSVAVRADGTLWAWGDNS 477
Query: 565 NGQLGLGDSQERETP 579
+GQLG+G + TP
Sbjct: 478 SGQLGIGSTVAASTP 492
Score = 219 (82.2 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 106/404 (26%), Positives = 171/404 (42%)
Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAAL--VT 278
V WG G +G DG+V+ T P L+ + V L V N+++ A V
Sbjct: 315 VSAWGNNAQGA-VG---DGTVANRST------PTLIVAPVTL-VNNVAIAAGTGVSFSVL 363
Query: 279 KEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTW 338
G VF WG G+LG+ V+ P ++ + + G F + L +G ++ W
Sbjct: 364 ANGTVFGWGGNGAGQLGNGTFGAVTAPTVLSAGASAWLGVEPGGAF-SLGLRSNGTLWAW 422
Query: 339 GHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTF 398
G N G +G+ + +P + R + A G H+ V G L+ +GD +
Sbjct: 423 GGNASGQ--LGDGTTTPSAIPVPVVGGAGNWRTT--ATGTAHSVAVRADGTLWAWGDNSS 478
Query: 399 GVLGHGNLQNVSQPKEVE----SLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLF 454
G LG G+ S P+++ + G +VA G H+ + K++ G L+
Sbjct: 479 GQLGIGSTVAASTPQQITVTNPASAGNDWTAVAGGGAHSLGL--------KAD---GTLW 527
Query: 455 TWGDADKGRLGHVDG-ERKLLPT-CVT-RLVDFD--FVQASCGRMLTVGLTGLGKVYTMG 509
+WGD G+LG G + P VT +FD +V + G + ++ L G ++T G
Sbjct: 528 SWGDNTFGQLGDGTGTSNRTTPVQIVTGNPGNFDRNWVAVAAGGVFSLALQADGTIWTWG 587
Query: 510 SAVHGQLG-NPK----AKDRSITV---VEGKLKEEFVKG---ISSGSYHVAVLTSGGSVY 558
QLG +P A R++ V F I++G H L + G+++
Sbjct: 588 DNSLLQLGTDPAMLTPATQRNVPAQLAVASPPSTAFNSSWVAIAAGQDHGLSLQADGTLW 647
Query: 559 TWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
WG N+ GQLG G + TP V S+ G+S + A
Sbjct: 648 AWGANSVGQLGNGVTTATFTPVQVINAEGVPYVSLAAGTSHSLA 691
Score = 217 (81.4 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 93/376 (24%), Positives = 151/376 (40%)
Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM---DVSCPKLVE 309
P L+ D IS G H+ + +G ++ WG+ G LG+ V + +V+ P V
Sbjct: 232 PTPLKIGTDRDWTAISAGEMHSVALKADGSLWSWGQNLFGELGNGVALPGANVTTPTRVG 291
Query: 310 CLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGV 369
+G + +++ G T AL ++G + WG+N GA VG+ + P + + V
Sbjct: 292 --TGSDWVAIAAGALHTVALHRNGTVSAWGNNAQGA--VGDGTVANRSTPTLIVAPVTLV 347
Query: 370 RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACG 429
+A G + V +G +F +G G LG+G V+ P V S
Sbjct: 348 NNVAIAAGTGVSFSVLANGTVFGWGGNGAGQLGNGTFGAVTAPT---------VLSAGAS 398
Query: 430 PWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQA 489
W +SN G L+ WG G+LG +P V ++
Sbjct: 399 AWLGVEPGGAFSLGLRSN---GTLWAWGGNASGQLGDGTTTPSAIPVPVVGGAG-NWRTT 454
Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK----AKDRSITVVEGKLKEEFVKGISSGS 545
+ G +V + G ++ G GQLG + + ITV ++ G
Sbjct: 455 ATGTAHSVAVRADGTLWAWGDNSSGQLGIGSTVAASTPQQITVTNPASAGNDWTAVAGGG 514
Query: 546 YHVAVLTSGGSVYTWGKNANGQLGLGD-SQERETPTFVEALR----DRQVESVVCGSSIT 600
H L + G++++WG N GQLG G + R TP + DR +V G +
Sbjct: 515 AHSLGLKADGTLWSWGDNTFGQLGDGTGTSNRTTPVQIVTGNPGNFDRNWVAVAAGGVFS 574
Query: 601 AAICLHKSI-SVGDQS 615
A+ +I + GD S
Sbjct: 575 LALQADGTIWTWGDNS 590
Score = 206 (77.6 bits), Expect = 4.2e-12, P = 4.2e-12
Identities = 67/238 (28%), Positives = 106/238 (44%)
Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
V VA G H + + G L+ G FG LG G N + P +V K+VA G
Sbjct: 34 VPHVAAGGNHVLTLRSDGTLWAAGSNQFGQLGDGTGINRTSPVQVPGTW----KTVAAGT 89
Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGH--VDGERKLLPTCVTRL-VDFDFV 487
H+ I K++ G L+ WG G+LG V+G+ R+ D+V
Sbjct: 90 THSLGI--------KAD---GSLWAWGSNLFGQLGQPLVNGQLATNKFSPIRIGTGNDWV 138
Query: 488 QASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRS--ITVVEGKLKEEFVKGISSGS 545
S G + + GL G G +++ G+ + G+LG+ R + VV L +++G
Sbjct: 139 AVSAGELTSFGLKGDGTLWSWGNNLFGELGDGTTVSRPQPVQVVADPLSNGRYVAVAAGG 198
Query: 546 YHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
H L + G+++ WG N GQLG G + PT ++ DR ++ G + A+
Sbjct: 199 EHALALQADGTLWAWGANLTGQLGTGGTGILPNPTPLKIGTDRDWTAISAGEMHSVAL 256
Score = 156 (60.0 bits), Expect = 9.4e-07, P = 9.4e-07
Identities = 72/289 (24%), Positives = 114/289 (39%)
Query: 312 SGINVQSVSCGEFQTCALTKSGEIYTWGHNNHG--ADLVG-ERRSRSHWLPRKLFDTLDG 368
+G + +V+ G + L G +++WG N G D G R+ + D
Sbjct: 503 AGNDWTAVAGGGAHSLGLKADGTLWSWGDNTFGQLGDGTGTSNRTTPVQIVTGNPGNFDR 562
Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGH--GNLQNVSQPKEVESLRGLKVKSV 426
V+ A G + A+ G ++T+GD + LG L +Q L S
Sbjct: 563 NWVAVAAGGVFSLAL-QADGTIWTWGDNSLLQLGTDPAMLTPATQRNVPAQLAVASPPST 621
Query: 427 ACGP-WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFD 485
A W A D S G L+ WG G+LG+ P V
Sbjct: 622 AFNSSWVAIAAGQ---DHGLSLQADGTLWAWGANSVGQLGNGVTTATFTPVQVINAEGVP 678
Query: 486 FVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG-----------NPKAKD---RSITVVEG 531
+V + G ++ G ++ G+ GQLG NP+ R +T
Sbjct: 679 YVSLAAGTSHSLAGRSDGTLWAWGNNTSGQLGTGPHPGDADPLNPQPHTVPARILTSNPV 738
Query: 532 KLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPT 580
++++ + GS H A L S G+++TWG+N +GQLG G + E + PT
Sbjct: 739 SAADDWLVATAGGS-HSAALKSNGTLWTWGQNTSGQLGNGTTTEADIPT 786
>TIGR_CMR|GSU_1251 [details] [associations]
symbol:GSU_1251 "BNR repeat domain protein" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
Gene3D:2.60.40.360 InterPro:IPR008962 InterPro:IPR011040
SUPFAM:SSF50939 RefSeq:NP_952304.1 ProteinModelPortal:Q74DR4
GeneID:2688149 KEGG:gsu:GSU1251 PATRIC:22025273
HOGENOM:HOG000144307 OMA:QADGTLW
BioCyc:GSUL243231:GH27-1279-MONOMER Uniprot:Q74DR4
Length = 2082
Score = 254 (94.5 bits), Expect = 3.0e-17, P = 3.0e-17
Identities = 88/330 (26%), Positives = 147/330 (44%)
Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
V +++ G H + +G ++ G + G+LG ++ + P V G ++V+ G
Sbjct: 34 VPHVAAGGNHVLTLRSDGTLWAAGSNQFGQLGDGTGINRTSPVQVP---G-TWKTVAAGT 89
Query: 324 FQTCALTKSGEIYTWGHN---NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWH 380
+ + G ++ WG N G LV + + + + P ++ D V VS GE
Sbjct: 90 THSLGIKADGSLWAWGSNLFGQLGQPLVNGQLATNKFSPIRIGTGNDWVAVS---AGELT 146
Query: 381 TAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEV--ESLRGLKVKSVACGPWHTAAIVD 438
+ + G L+++G+ FG LG G + QP +V + L + +VA G H A+
Sbjct: 147 SFGLKGDGTLWSWGNNLFGELGDGTTVSRPQPVQVVADPLSNGRYVAVAAGGEHALAL-- 204
Query: 439 IMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLV--DFDFVQASCGRMLT 496
D G L+ WG G+LG G +LP + D D+ S G M +
Sbjct: 205 -QAD--------GTLWAWGANLTGQLG--TGGTGILPNPTPLKIGTDRDWTAISAGEMHS 253
Query: 497 VGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLK--EEFVKGISSGSYHVAVLTSG 554
V L G +++ G + G+LGN A + ++ ++V I++G+ H L
Sbjct: 254 VALKADGSLWSWGQNLFGELGNGVALPGANVTTPTRVGTGSDWV-AIAAGALHTVALHRN 312
Query: 555 GSVYTWGKNANGQLGLGDSQERETPTFVEA 584
G+V WG NA G +G G R TPT + A
Sbjct: 313 GTVSAWGNNAQGAVGDGTVANRSTPTLIVA 342
Score = 230 (86.0 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 76/315 (24%), Positives = 139/315 (44%)
Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQT 326
++ G +HA + +G ++ WG G+LG + P ++ + + ++S GE +
Sbjct: 194 VAAGGEHALALQADGTLWAWGANLTGQLGTGGTGILPNPTPLKIGTDRDWTAISAGEMHS 253
Query: 327 CALTKSGEIYTWGHNNHGADLVGERRSRSH-WLPRKLFDTLDGVRVSKVACGEWHTAIVS 385
AL G +++WG N G G ++ P ++ D V + A G HT +
Sbjct: 254 VALKADGSLWSWGQNLFGELGNGVALPGANVTTPTRVGTGSDWVAI---AAGALHTVALH 310
Query: 386 TSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCK 445
+G + +G+ G +G G + N S P + + L V +VA T ++ +
Sbjct: 311 RNGTVSAWGNNAQGAVGDGTVANRSTPTLIVAPVTL-VNNVAIAAG-TGVSFSVLAN--- 365
Query: 446 SNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKV 505
G +F WG G+LG+ PT ++ ++ G ++GL G +
Sbjct: 366 -----GTVFGWGGNGAGQLGNGTFGAVTAPTVLSAGASA-WLGVEPGGAFSLGLRSNGTL 419
Query: 506 YTMGSAVHGQLGNPKAKDRSITV-VEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNA 564
+ G GQLG+ +I V V G + ++G+ H + + G+++ WG N+
Sbjct: 420 WAWGGNASGQLGDGTTTPSAIPVPVVGGAGNW--RTTATGTAHSVAVRADGTLWAWGDNS 477
Query: 565 NGQLGLGDSQERETP 579
+GQLG+G + TP
Sbjct: 478 SGQLGIGSTVAASTP 492
Score = 219 (82.2 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 106/404 (26%), Positives = 171/404 (42%)
Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAAL--VT 278
V WG G +G DG+V+ T P L+ + V L V N+++ A V
Sbjct: 315 VSAWGNNAQGA-VG---DGTVANRST------PTLIVAPVTL-VNNVAIAAGTGVSFSVL 363
Query: 279 KEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTW 338
G VF WG G+LG+ V+ P ++ + + G F + L +G ++ W
Sbjct: 364 ANGTVFGWGGNGAGQLGNGTFGAVTAPTVLSAGASAWLGVEPGGAF-SLGLRSNGTLWAW 422
Query: 339 GHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTF 398
G N G +G+ + +P + R + A G H+ V G L+ +GD +
Sbjct: 423 GGNASGQ--LGDGTTTPSAIPVPVVGGAGNWRTT--ATGTAHSVAVRADGTLWAWGDNSS 478
Query: 399 GVLGHGNLQNVSQPKEVE----SLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLF 454
G LG G+ S P+++ + G +VA G H+ + K++ G L+
Sbjct: 479 GQLGIGSTVAASTPQQITVTNPASAGNDWTAVAGGGAHSLGL--------KAD---GTLW 527
Query: 455 TWGDADKGRLGHVDG-ERKLLPT-CVT-RLVDFD--FVQASCGRMLTVGLTGLGKVYTMG 509
+WGD G+LG G + P VT +FD +V + G + ++ L G ++T G
Sbjct: 528 SWGDNTFGQLGDGTGTSNRTTPVQIVTGNPGNFDRNWVAVAAGGVFSLALQADGTIWTWG 587
Query: 510 SAVHGQLG-NPK----AKDRSITV---VEGKLKEEFVKG---ISSGSYHVAVLTSGGSVY 558
QLG +P A R++ V F I++G H L + G+++
Sbjct: 588 DNSLLQLGTDPAMLTPATQRNVPAQLAVASPPSTAFNSSWVAIAAGQDHGLSLQADGTLW 647
Query: 559 TWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
WG N+ GQLG G + TP V S+ G+S + A
Sbjct: 648 AWGANSVGQLGNGVTTATFTPVQVINAEGVPYVSLAAGTSHSLA 691
Score = 217 (81.4 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 93/376 (24%), Positives = 151/376 (40%)
Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM---DVSCPKLVE 309
P L+ D IS G H+ + +G ++ WG+ G LG+ V + +V+ P V
Sbjct: 232 PTPLKIGTDRDWTAISAGEMHSVALKADGSLWSWGQNLFGELGNGVALPGANVTTPTRVG 291
Query: 310 CLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGV 369
+G + +++ G T AL ++G + WG+N GA VG+ + P + + V
Sbjct: 292 --TGSDWVAIAAGALHTVALHRNGTVSAWGNNAQGA--VGDGTVANRSTPTLIVAPVTLV 347
Query: 370 RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACG 429
+A G + V +G +F +G G LG+G V+ P V S
Sbjct: 348 NNVAIAAGTGVSFSVLANGTVFGWGGNGAGQLGNGTFGAVTAPT---------VLSAGAS 398
Query: 430 PWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQA 489
W +SN G L+ WG G+LG +P V ++
Sbjct: 399 AWLGVEPGGAFSLGLRSN---GTLWAWGGNASGQLGDGTTTPSAIPVPVVGGAG-NWRTT 454
Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK----AKDRSITVVEGKLKEEFVKGISSGS 545
+ G +V + G ++ G GQLG + + ITV ++ G
Sbjct: 455 ATGTAHSVAVRADGTLWAWGDNSSGQLGIGSTVAASTPQQITVTNPASAGNDWTAVAGGG 514
Query: 546 YHVAVLTSGGSVYTWGKNANGQLGLGD-SQERETPTFVEALR----DRQVESVVCGSSIT 600
H L + G++++WG N GQLG G + R TP + DR +V G +
Sbjct: 515 AHSLGLKADGTLWSWGDNTFGQLGDGTGTSNRTTPVQIVTGNPGNFDRNWVAVAAGGVFS 574
Query: 601 AAICLHKSI-SVGDQS 615
A+ +I + GD S
Sbjct: 575 LALQADGTIWTWGDNS 590
Score = 206 (77.6 bits), Expect = 4.2e-12, P = 4.2e-12
Identities = 67/238 (28%), Positives = 106/238 (44%)
Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
V VA G H + + G L+ G FG LG G N + P +V K+VA G
Sbjct: 34 VPHVAAGGNHVLTLRSDGTLWAAGSNQFGQLGDGTGINRTSPVQVPGTW----KTVAAGT 89
Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGH--VDGERKLLPTCVTRL-VDFDFV 487
H+ I K++ G L+ WG G+LG V+G+ R+ D+V
Sbjct: 90 THSLGI--------KAD---GSLWAWGSNLFGQLGQPLVNGQLATNKFSPIRIGTGNDWV 138
Query: 488 QASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRS--ITVVEGKLKEEFVKGISSGS 545
S G + + GL G G +++ G+ + G+LG+ R + VV L +++G
Sbjct: 139 AVSAGELTSFGLKGDGTLWSWGNNLFGELGDGTTVSRPQPVQVVADPLSNGRYVAVAAGG 198
Query: 546 YHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
H L + G+++ WG N GQLG G + PT ++ DR ++ G + A+
Sbjct: 199 EHALALQADGTLWAWGANLTGQLGTGGTGILPNPTPLKIGTDRDWTAISAGEMHSVAL 256
Score = 156 (60.0 bits), Expect = 9.4e-07, P = 9.4e-07
Identities = 72/289 (24%), Positives = 114/289 (39%)
Query: 312 SGINVQSVSCGEFQTCALTKSGEIYTWGHNNHG--ADLVG-ERRSRSHWLPRKLFDTLDG 368
+G + +V+ G + L G +++WG N G D G R+ + D
Sbjct: 503 AGNDWTAVAGGGAHSLGLKADGTLWSWGDNTFGQLGDGTGTSNRTTPVQIVTGNPGNFDR 562
Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGH--GNLQNVSQPKEVESLRGLKVKSV 426
V+ A G + A+ G ++T+GD + LG L +Q L S
Sbjct: 563 NWVAVAAGGVFSLAL-QADGTIWTWGDNSLLQLGTDPAMLTPATQRNVPAQLAVASPPST 621
Query: 427 ACGP-WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFD 485
A W A D S G L+ WG G+LG+ P V
Sbjct: 622 AFNSSWVAIAAGQ---DHGLSLQADGTLWAWGANSVGQLGNGVTTATFTPVQVINAEGVP 678
Query: 486 FVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG-----------NPKAKD---RSITVVEG 531
+V + G ++ G ++ G+ GQLG NP+ R +T
Sbjct: 679 YVSLAAGTSHSLAGRSDGTLWAWGNNTSGQLGTGPHPGDADPLNPQPHTVPARILTSNPV 738
Query: 532 KLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPT 580
++++ + GS H A L S G+++TWG+N +GQLG G + E + PT
Sbjct: 739 SAADDWLVATAGGS-HSAALKSNGTLWTWGQNTSGQLGNGTTTEADIPT 786
>RGD|1307187 [details] [associations]
symbol:Nek9 "NIMA-related kinase 9" species:10116 "Rattus
norvegicus" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0019901 "protein kinase binding"
evidence=ISO] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 RGD:1307187 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PROSITE:PS50012 OMA:GCDGTFL OrthoDB:EOG4NZTSM IPI:IPI00870835
Ensembl:ENSRNOT00000009300 UCSC:RGD:1307187 ArrayExpress:D4A4B2
Uniprot:D4A4B2
Length = 975
Score = 251 (93.4 bits), Expect = 3.9e-17, Sum P(2) = 3.9e-17
Identities = 83/316 (26%), Positives = 135/316 (42%)
Query: 265 QNISLGAKHAALVTKEGEVFCW-----GEGKDGRLGHKVNMDVSCPKLVECLSGINVQSV 319
+ + G H A+VT E E++ W G G+LGH PK VE L G + V
Sbjct: 370 RQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIHQV 429
Query: 320 SCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEW 379
SCG+ T +T G++Y +G + +G V + P +L L V +V+CG+
Sbjct: 430 SCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGPEVLEPMQLNFFLSNP-VEQVSCGDN 488
Query: 380 HTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDI 439
H +++ + +++++G G +G LG + ++ P+ V+ + L + +V CG T +
Sbjct: 489 HVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALIIVAVQCGCDGTFLLTQS 548
Query: 440 -MVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASC---GRML 495
V C N KL G + H T T F + G+
Sbjct: 549 GKVLACGLNEFN-KLGL-NQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTH 606
Query: 496 TVGLTGLGKVYTMGSAVHGQLGNPKAKDR-SITVVEGKLKEEFVKGISSGSYHVAVLTSG 554
T + G++ T G GQLG K R I ++ G L + V +S G T
Sbjct: 607 TAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDD 666
Query: 555 GSVYTWGKNANGQLGL 570
++ WG NG+L +
Sbjct: 667 NHIFAWGNGGNGRLAM 682
Score = 247 (92.0 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 87/349 (24%), Positives = 153/349 (43%)
Query: 274 AALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECL-SGINVQSVSCGEFQTCALTKS 332
A + ++ EV+ WG GK S P+ ++ + SG + + V G +T
Sbjct: 338 AVVTSRTSEVYVWGGGK------------STPQKLDVIKSGCSARQVCAGNTHFAVVTVE 385
Query: 333 GEIYTWGHNNHGADLVGE--RRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQL 390
E+YTW + G L G+ ++ + K + L G + +V+CG+ T V+ GQL
Sbjct: 386 KELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQL 445
Query: 391 FTYGDGTFGVLGHGNLQN--VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNA 448
+ +G +G +G + V +P ++ V+ V+CG H +++ R K
Sbjct: 446 YAFGSDYYGCMGVDKVSGPEVLEPMQLNFFLSNPVEQVSCGDNHV-----VVLTRNK--- 497
Query: 449 IGGKLFTWGDADKGRLG-----------HVDGERKLLPTCVTRLVDFDFVQASCGRMLTV 497
++++WG + GRLG VD + L+ V D F+ G++L
Sbjct: 498 ---EVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALIIVAVQCGCDGTFLLTQSGKVLAC 554
Query: 498 GLTGLGKV---YTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSG 554
GL K+ M ++ + + S T+ + +L ++ I+ G H A +
Sbjct: 555 GLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAK-QLSFYKIRTIAPGKTHTAAIDER 613
Query: 555 GSVYTWGKNANGQLGLGDSQERETPTFVEA-LRDRQVESVVCGSSITAA 602
G + T+G N GQLG+G+ ++R + L +QV V CG T A
Sbjct: 614 GRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIA 662
Score = 196 (74.1 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 76/263 (28%), Positives = 112/263 (42%)
Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQ-VDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
V + EG L G G + +K + L P L + V+ +S G H ++T+
Sbjct: 437 VCVTDEGQLYA-FGSDYYGCMGVDKVSGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTR 495
Query: 280 EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
EV+ WG G+ GRLG D P+ V+ + + +V CG T LT+SG++ G
Sbjct: 496 NKEVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALIIVAVQCGCDGTFLLTQSGKVLACG 555
Query: 340 HNNH---GAD--LVGERRSRS-HWLPRK----LFDTLDGVRVSKVACGEWHTAIVSTSGQ 389
N G + + G + H +P L L ++ +A G+ HTA + G+
Sbjct: 556 LNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGR 615
Query: 390 LFTYGDGTFGVLGHGNLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCKSNA 448
L T+G G LG GN + + L G +V V+CG T A D N
Sbjct: 616 LLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATD-------DNH 668
Query: 449 IGGKLFTWGDADKGRLGHVDGER 471
I F WG+ GRL ER
Sbjct: 669 I----FAWGNGGNGRLAMTPTER 687
Score = 181 (68.8 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 70/280 (25%), Positives = 125/280 (44%)
Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG-HKVN-MDVSCPKLVEC 310
PK +E + +S G VT EG+++ +G G +G KV+ +V P +
Sbjct: 415 PKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGPEVLEPMQLNF 474
Query: 311 LSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR 370
V+ VSCG+ LT++ E+Y+WG +G +G ++ P+++ D +
Sbjct: 475 FLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGR--LGLDSEEDYYTPQRV-DVPKALI 531
Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTF----------GVLGHGNLQNVSQPKE---VES 417
+ V CG T +++ SG++ G F G++ H V +
Sbjct: 532 IVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQ 591
Query: 418 LRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL-LPT 476
L K++++A G HTAAI D +R G+L T+G G+LG + +++L +
Sbjct: 592 LSFYKIRTIAPGKTHTAAI-D---ER-------GRLLTFGCNKCGQLGVGNYKKRLGINL 640
Query: 477 CVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
L ++ SCG T+ T ++ G+ +G+L
Sbjct: 641 LGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRL 680
Score = 134 (52.2 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 52/189 (27%), Positives = 88/189 (46%)
Query: 296 HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRS 355
H+V S L + LS +++++ G+ T A+ + G + T+G N G VG + R
Sbjct: 578 HEVPYTTSFT-LAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRL 636
Query: 356 HWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLG-------HGNLQN 408
L L G +V +V+CG+ T + +F +G+G G L HG+
Sbjct: 637 GI--NLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDIC 694
Query: 409 VSQPKEV-ESLRGLKVKSVACGPWHTAAIVDIMVDR--CKSNAIGGKLFT--WGDADKGR 463
S P+ + SL V ++C WHT IV+ +++ +SN+ G + T + GR
Sbjct: 695 TSWPRPIFGSLH--HVPDLSCRGWHTILIVEKVLNSKTIRSNSSGLSIGTVVQSSSPGGR 752
Query: 464 LGHVDGERK 472
+G GE +
Sbjct: 753 IGGGGGEEE 761
Score = 50 (22.7 bits), Expect = 3.9e-17, Sum P(2) = 3.9e-17
Identities = 16/65 (24%), Positives = 27/65 (41%)
Query: 685 ENQSPRNLLNLQGSLSEEVKEEKGALTPSRGQSFTSKQSRNVER--KPGECLESASSLSS 742
++ SP + G E+ ++E PS G T + R +E P E + ++ SS
Sbjct: 745 QSSSPGGRIGGGGGEEEDSQQESETPDPSGGFRGTMEADRGMEGLISPTEAVGNSCGASS 804
Query: 743 GLQRW 747
W
Sbjct: 805 SCPGW 809
>UNIPROTKB|Q9UGK8 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0050709 "negative
regulation of protein secretion" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IDA] InterPro:IPR027048 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0007165 GO:GO:0005730
GO:GO:0045111 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005087 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0050709 eggNOG:COG5184 CTD:26297
HOGENOM:HOG000154414 HOVERGEN:HBG051746 KO:K15421 OMA:NIWAPKP
OrthoDB:EOG4J1183 PANTHER:PTHR22870:SF7 EMBL:AJ243950 EMBL:AJ243951
EMBL:BC065375 IPI:IPI00015919 IPI:IPI00383576 RefSeq:NP_036271.1
UniGene:Hs.32470 ProteinModelPortal:Q9UGK8 SMR:Q9UGK8 IntAct:Q9UGK8
STRING:Q9UGK8 PhosphoSite:Q9UGK8 DMDM:38257790 PaxDb:Q9UGK8
PeptideAtlas:Q9UGK8 PRIDE:Q9UGK8 Ensembl:ENST00000265965
Ensembl:ENST00000528200 GeneID:26297 KEGG:hsa:26297 UCSC:uc001mnm.3
UCSC:uc001mnn.3 GeneCards:GC11M017767 HGNC:HGNC:17499 HPA:HPA037811
MIM:606051 neXtProt:NX_Q9UGK8 PharmGKB:PA143485610
InParanoid:Q9UGK8 PhylomeDB:Q9UGK8 GenomeRNAi:26297 NextBio:48643
ArrayExpress:Q9UGK8 Bgee:Q9UGK8 CleanEx:HS_SERGEF
Genevestigator:Q9UGK8 GermOnline:ENSG00000129158 Uniprot:Q9UGK8
Length = 458
Score = 240 (89.5 bits), Expect = 7.1e-17, P = 7.1e-17
Identities = 112/393 (28%), Positives = 165/393 (41%)
Query: 249 DALLPKLLESAVM-LDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKL 307
D LLP+ L V+ I+ G H+A+VT G++F G KDG+LG D+ P
Sbjct: 35 DVLLPQQLNDFCKPRSVRRITGGGGHSAVVTDGGDLFVCGLNKDGQLGLGHTEDI--PYF 92
Query: 308 VECLS--GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDT 365
C S G +Q V+CG T LT++G++ + G N+ G L R +P+ +
Sbjct: 93 TPCKSLFGCPIQQVACGWDFTIMLTENGQVLSCGSNSFG-QLGVPHGPRRCVVPQAI--E 149
Query: 366 LDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV---LGHGNLQ----NVSQPKEVESL 418
L +V +A G H + SG +F +G G L G +P V L
Sbjct: 150 LHKEKVVCIAAGLRHAVAATASGIVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGL 209
Query: 419 RGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPT-- 476
K V G H+A++ D G+++ WG G+L + E LP
Sbjct: 210 ENSKAMCVLAGSDHSASLTD-----------AGEVYVWGSNKHGQLAN---EAAFLPVPQ 255
Query: 477 -CVTRLVDFDFVQAS-CGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEG-KL 533
+ V A G V T GK++T G A +GQLG R + EG KL
Sbjct: 256 KIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLG------RKLETYEGWKL 309
Query: 534 KEE--FVK----------------G---ISSGSYH-VAVLTSGGSVYTWGKNANGQLGLG 571
+++ F+ G +S GS H +A++ GG Y+WG N +G G G
Sbjct: 310 EKQDSFLPCSRPPNSMPSSPHCLTGATEVSCGSEHNLAII--GGVCYSWGWNEHGMCGDG 367
Query: 572 DSQERETPTFVEALRDRQVESVVCGSSITAAIC 604
P V+AL V CG+ + A+C
Sbjct: 368 TEANVWAPKPVQALLSSSGLLVGCGAGHSLALC 400
Score = 231 (86.4 bits), Expect = 7.1e-16, P = 7.1e-16
Identities = 88/298 (29%), Positives = 131/298 (43%)
Query: 283 VFCWGEGKDGRLGHKVNMDVSCPK-LVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
+F WG G+LG DV P+ L + +V+ ++ G + +T G+++ G N
Sbjct: 17 LFAWGANSYGQLGLGHKEDVLLPQQLNDFCKPRSVRRITGGGGHSAVVTDGGDLFVCGLN 76
Query: 342 NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVL 401
G +G ++ P K +L G + +VACG T +++ +GQ+ + G +FG L
Sbjct: 77 KDGQLGLGHTEDIPYFTPCK---SLFGCPIQQVACGWDFTIMLTENGQVLSCGSNSFGQL 133
Query: 402 G--HGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD- 458
G HG + V P+ +E L KV +A G H A G +F WG
Sbjct: 134 GVPHGPRRCVV-PQAIE-LHKEKVVCIAAGLRHAVAAT-----------ASGIVFQWGTG 180
Query: 459 -ADKGRLGHVDGERKLLPTCV--TRLVDFDFVQASC---GRMLTVGLTGLGKVYTMGSAV 512
A GR L T +R+ + +A C G + LT G+VY GS
Sbjct: 181 LASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNK 240
Query: 513 HGQLGNPKAKDRSITVVEGK-LKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLG 569
HGQL N A +E + E V I SG H+ T G ++TWG+ GQLG
Sbjct: 241 HGQLANEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLG 298
Score = 190 (71.9 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 71/279 (25%), Positives = 118/279 (42%)
Query: 328 ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
A + ++ WG N++G +G LP++L D V ++ G H+A+V+
Sbjct: 10 AAPAAAALFAWGANSYGQ--LGLGHKEDVLLPQQLNDFCKPRSVRRITGGGGHSAVVTDG 67
Query: 388 GQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSN 447
G LF G G LG G+ +++ +SL G ++ VACG W IM+
Sbjct: 68 GDLFVCGLNKDGQLGLGHTEDIPYFTPCKSLFGCPIQQVACG-WDFT----IMLTE---- 118
Query: 448 AIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYT 507
G++ + G G+LG G R+ + L V + G V T G V+
Sbjct: 119 --NGQVLSCGSNSFGQLGVPHGPRRCVVPQAIELHKEKVVCIAAGLRHAVAATASGIVFQ 176
Query: 508 MGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISS--------GSYHVAVLTSGGSVYT 559
G+ + G +++ + + V G+ + GS H A LT G VY
Sbjct: 177 WGTGL-ASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYV 235
Query: 560 WGKNANGQLGLGDSQERETPTFVEA--LRDRQVESVVCG 596
WG N +GQL ++ P +EA ++ +V ++ G
Sbjct: 236 WGSNKHGQLA-NEAAFLPVPQKIEAHCFQNEKVTAIWSG 273
Score = 171 (65.3 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 62/224 (27%), Positives = 101/224 (45%)
Query: 390 LFTYGDGTFGVLGHGNLQNVSQPKEVESL-RGLKVKSVACGPWHTAAIVDIMVDRCKSNA 448
LF +G ++G LG G+ ++V P+++ + V+ + G H+A + D
Sbjct: 17 LFAWGANSYGQLGLGHKEDVLLPQQLNDFCKPRSVRRITGGGGHSAVVTD---------- 66
Query: 449 IGGKLFTWGDADKGRLG--HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVY 506
GG LF G G+LG H + P C + L Q +CG T+ LT G+V
Sbjct: 67 -GGDLFVCGLNKDGQLGLGHTEDIPYFTP-CKS-LFGCPIQQVACGWDFTIMLTENGQVL 123
Query: 507 TMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGK---N 563
+ GS GQLG P R + +L +E V I++G H T+ G V+ WG +
Sbjct: 124 SCGSNSFGQLGVPHGPRRCVVPQAIELHKEKVVCIAAGLRHAVAATASGIVFQWGTGLAS 183
Query: 564 ANGQLGLGDSQE----RETPTFVEALRDRQVESVVCGSSITAAI 603
+L G + + P+ V L + + V+ GS +A++
Sbjct: 184 CGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASL 227
Score = 166 (63.5 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 49/186 (26%), Positives = 83/186 (44%)
Query: 270 GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVE--CLSGINVQSVSCGEFQTC 327
G+ H+A +T GEV+ WG K G+L ++ + P+ +E C V ++ G
Sbjct: 220 GSDHSASLTDAGEVYVWGSNKHGQLANEAAF-LPVPQKIEAHCFQNEKVTAIWSGWTHLV 278
Query: 328 ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR--------------VSK 373
A T++G+++TWG ++G L + + W K L R ++
Sbjct: 279 AQTETGKMFTWGRADYG-QLGRKLETYEGWKLEKQDSFLPCSRPPNSMPSSPHCLTGATE 337
Query: 374 VACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHT 433
V+CG H + G +++G G+ G G NV PK V++L V CG H+
Sbjct: 338 VSCGSEHNLAI-IGGVCYSWGWNEHGMCGDGTEANVWAPKPVQALLSSSGLLVGCGAGHS 396
Query: 434 AAIVDI 439
A+ +
Sbjct: 397 LALCQL 402
Score = 131 (51.2 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 36/125 (28%), Positives = 61/125 (48%)
Query: 505 VYTMGSAVHGQLGNPKAKDRSITV-VEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKN 563
++ G+ +GQLG +D + + K V+ I+ G H AV+T GG ++ G N
Sbjct: 17 LFAWGANSYGQLGLGHKEDVLLPQQLNDFCKPRSVRRITGGGGHSAVVTDGGDLFVCGLN 76
Query: 564 ANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMP 623
+GQLGLG +++ T ++L ++ V CG T + + + +S Q +P
Sbjct: 77 KDGQLGLGHTEDIPYFTPCKSLFGCPIQQVACGWDFTIMLTENGQVLSCGSNSFGQLGVP 136
Query: 624 FGFRR 628
G RR
Sbjct: 137 HGPRR 141
>UNIPROTKB|F1NDJ4 [details] [associations]
symbol:RCCD1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104312 EMBL:AADN02038799 IPI:IPI00812606
Ensembl:ENSGALT00000038135 OMA:GHKDTSS Uniprot:F1NDJ4
Length = 221
Score = 158 (60.7 bits), Expect = 8.5e-17, Sum P(2) = 8.5e-17
Identities = 30/69 (43%), Positives = 43/69 (62%)
Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESL--RGLKVKSVAC 428
V+ V+CG HTA ++ G+L T+G G +G LGHG+ + P+ VE L GL+ + V C
Sbjct: 118 VAAVSCGSRHTAALTRGGELNTWGWGKYGQLGHGDRASCDHPRRVEQLWAEGLRAQEVVC 177
Query: 429 GPWHTAAIV 437
GPW+T V
Sbjct: 178 GPWNTYVCV 186
Score = 133 (51.9 bits), Expect = 9.3e-10, Sum P(2) = 9.3e-10
Identities = 28/69 (40%), Positives = 40/69 (57%)
Query: 316 VQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDT-LDGVRVSKV 374
V +VSCG T ALT+ GE+ TWG +G G+R S H PR++ +G+R +V
Sbjct: 118 VAAVSCGSRHTAALTRGGELNTWGWGKYGQLGHGDRASCDH--PRRVEQLWAEGLRAQEV 175
Query: 375 ACGEWHTAI 383
CG W+T +
Sbjct: 176 VCGPWNTYV 184
Score = 131 (51.2 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 33/86 (38%), Positives = 46/86 (53%)
Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECL- 311
P LL+ + V +S G++H A +T+ GE+ WG GK G+LGH P+ VE L
Sbjct: 107 PALLDLPLEPAVAAVSCGSRHTAALTRGGELNTWGWGKYGQLGHGDRASCDHPRRVEQLW 166
Query: 312 -SGINVQSVSCGEFQT--CALTKSGE 334
G+ Q V CG + T C L + GE
Sbjct: 167 AEGLRAQEVVCGPWNTYVCVL-QQGE 191
Score = 129 (50.5 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 27/67 (40%), Positives = 41/67 (61%)
Query: 399 GVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
G LGHG+L++ QP+ VE+L G+ +++VA G WH+A + D GG L+ WG
Sbjct: 11 GQLGHGSLESEQQPRLVEALGGVPMRAVAAGGWHSACVSD-----------GGDLYVWGW 59
Query: 459 ADKGRLG 465
+ G+LG
Sbjct: 60 NESGQLG 66
Score = 118 (46.6 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 28/64 (43%), Positives = 33/64 (51%)
Query: 535 EEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEAL--RDRQVES 592
E V +S GS H A LT GG + TWG GQLG GD + P VE L + +
Sbjct: 115 EPAVAAVSCGSRHTAALTRGGELNTWGWGKYGQLGHGDRASCDHPRRVEQLWAEGLRAQE 174
Query: 593 VVCG 596
VVCG
Sbjct: 175 VVCG 178
Score = 103 (41.3 bits), Expect = 8.5e-17, Sum P(2) = 8.5e-17
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 290 KDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHG 344
+ G+LGH P+LVE L G+ +++V+ G + + ++ G++Y WG N G
Sbjct: 9 RHGQLGHGSLESEQQPRLVEALGGVPMRAVAAGGWHSACVSDGGDLYVWGWNESG 63
Score = 93 (37.8 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 24/62 (38%), Positives = 31/62 (50%)
Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
+ HG +G S PR L + L GV + VA G WH+A VS G L+ +G G
Sbjct: 8 HRHGQ--LGHGSLESEQQPR-LVEALGGVPMRAVAAGGWHSACVSDGGDLYVWGWNESGQ 64
Query: 401 LG 402
LG
Sbjct: 65 LG 66
Score = 76 (31.8 bits), Expect = 5.5e-14, Sum P(2) = 5.5e-14
Identities = 13/43 (30%), Positives = 28/43 (65%)
Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG 295
P+L+E+ + ++ ++ G H+A V+ G+++ WG + G+LG
Sbjct: 24 PRLVEALGGVPMRAVAAGGWHSACVSDGGDLYVWGWNESGQLG 66
Score = 69 (29.3 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 19/46 (41%), Positives = 24/46 (52%)
Query: 423 VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD 468
V +V+CG HTAA+ GG+L TWG G+LGH D
Sbjct: 118 VAAVSCGSRHTAALTR-----------GGELNTWGWGKYGQLGHGD 152
Score = 57 (25.1 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
SCG T LT G++ T G +GQLG+
Sbjct: 122 SCGSRHTAALTRGGELNTWGWGKYGQLGH 150
Score = 51 (23.0 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 17/58 (29%), Positives = 24/58 (41%)
Query: 462 GRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNP 519
G+LGH E + P V L + G + ++ G +Y G GQLG P
Sbjct: 11 GQLGHGSLESEQQPRLVEALGGVPMRAVAAGGWHSACVSDGGDLYVWGWNESGQLGLP 68
Score = 39 (18.8 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 579 PTFVEALRDRQVESVVCGSSITAAI 603
P ++ + V +V CGS TAA+
Sbjct: 107 PALLDLPLEPAVAAVSCGSRHTAAL 131
>RGD|1563497 [details] [associations]
symbol:Sergef "secretion regulating guanine nucleotide exchange
factor" species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IEA;ISO] [GO:0050709 "negative regulation of
protein secretion" evidence=IEA;ISO] InterPro:IPR027048 RGD:1563497
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005730 GO:GO:0045111
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0050709
GeneTree:ENSGT00700000104160 OrthoDB:EOG4J1183
PANTHER:PTHR22870:SF7 IPI:IPI00360920 Ensembl:ENSRNOT00000015352
UCSC:RGD:1563497 Uniprot:D3ZN16
Length = 339
Score = 232 (86.7 bits), Expect = 9.3e-17, P = 9.3e-17
Identities = 96/316 (30%), Positives = 135/316 (42%)
Query: 277 VTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVE--CLSGINVQSVSCGEFQTCALTKSGE 334
V+ +F WG G+LG DV P+ + C SG ++SV+ G + +T G
Sbjct: 11 VSAAAVLFAWGANSYGQLGLGHKEDVLLPQQLSDFCKSGC-IKSVTGGGGHSVVVTDGGG 69
Query: 335 IYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYG 394
++ G N G +G + K L G + +VACG T +++ GQ+ + G
Sbjct: 70 LFVCGLNKDGQLGLGHTEEVLRFTICK---PLLGCPIRQVACGWDFTIMLTEKGQVLSCG 126
Query: 395 DGTFGVLG--HGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGK 452
FG LG HG + V P+ +E LR KV VA G H A D G
Sbjct: 127 SNAFGQLGVPHGPRKCVV-PQAIECLRE-KVVCVAAGLRHALATTDT-----------GS 173
Query: 453 LFTWGD--ADKGRLGHVDGERKLL------PTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
F WG A GR G+ L P+ VT L V A G + LT G+
Sbjct: 174 TFQWGTGLASSGRR-LCPGQNLPLFLTAKEPSRVTGLESSTVVCAVAGSDHSASLTDTGE 232
Query: 505 VYTMGSAVHGQLGNPKAKDRSITVVEGK-LKEEFVKGISSGSYHVAVLTSGGSVYTWGKN 563
+Y G HGQL + VE ++E V + SG H+ T G V+TWG+
Sbjct: 233 LYVWGRNKHGQLASLATFLPLPQRVEAHYFQDEKVTAVWSGWTHLVAKTETGKVFTWGRA 292
Query: 564 ANGQLG--LGDSQERE 577
GQLG LG + ++
Sbjct: 293 DYGQLGRTLGSPEAQK 308
Score = 182 (69.1 bits), Expect = 7.8e-11, P = 7.8e-11
Identities = 79/278 (28%), Positives = 120/278 (43%)
Query: 249 DALLPKLLESAVMLD-VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKL 307
D LLP+ L +++++ G H+ +VT G +F G KDG+LG +V +
Sbjct: 35 DVLLPQQLSDFCKSGCIKSVTGGGGHSVVVTDGGGLFVCGLNKDGQLGLGHTEEVLRFTI 94
Query: 308 VECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLD 367
+ L G ++ V+CG T LT+ G++ + G N G L R +P+ + + L
Sbjct: 95 CKPLLGCPIRQVACGWDFTIMLTEKGQVLSCGSNAFG-QLGVPHGPRKCVVPQAI-ECLR 152
Query: 368 GVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV---LGHG-NLQNVSQPKEVESLRGLKV 423
+V VA G H + +G F +G G L G NL KE + GL+
Sbjct: 153 E-KVVCVAAGLRHALATTDTGSTFQWGTGLASSGRRLCPGQNLPLFLTAKEPSRVTGLES 211
Query: 424 KSVAC---GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTR 480
+V C G H+A++ D G+L+ WG G+L + L
Sbjct: 212 STVVCAVAGSDHSASLTDT-----------GELYVWGRNKHGQLASLATFLPLPQRVEAH 260
Query: 481 LVDFDFVQAS-CGRMLTVGLTGLGKVYTMGSAVHGQLG 517
+ V A G V T GKV+T G A +GQLG
Sbjct: 261 YFQDEKVTAVWSGWTHLVAKTETGKVFTWGRADYGQLG 298
Score = 180 (68.4 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 74/280 (26%), Positives = 121/280 (43%)
Query: 328 ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
A++ + ++ WG N++G +G LP++L D + V G H+ +V+
Sbjct: 10 AVSAAAVLFAWGANSYGQ--LGLGHKEDVLLPQQLSDFCKSGCIKSVTGGGGHSVVVTDG 67
Query: 388 GQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSN 447
G LF G G LG G+ + V + + L G ++ VACG W IM+ K
Sbjct: 68 GGLFVCGLNKDGQLGLGHTEEVLRFTICKPLLGCPIRQVACG-WDFT----IMLTE-K-- 119
Query: 448 AIGGKLFTWGDADKGRLGHVDGERK-LLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVY 506
G++ + G G+LG G RK ++P + L + V + G + T G +
Sbjct: 120 ---GQVLSCGSNAFGQLGVPHGPRKCVVPQAIECLRE-KVVCVAAGLRHALATTDTGSTF 175
Query: 507 TMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISS--------GSYHVAVLTSGGSVY 558
G+ + G +++ + + V G+ S GS H A LT G +Y
Sbjct: 176 QWGTGLASS-GRRLCPGQNLPLFLTAKEPSRVTGLESSTVVCAVAGSDHSASLTDTGELY 234
Query: 559 TWGKNANGQLGLGDSQERETPTFVEA--LRDRQVESVVCG 596
WG+N +GQL + P VEA +D +V +V G
Sbjct: 235 VWGRNKHGQLA-SLATFLPLPQRVEAHYFQDEKVTAVWSG 273
Score = 177 (67.4 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 64/232 (27%), Positives = 98/232 (42%)
Query: 384 VSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESL-RGLKVKSVACGPWHTAAIVDIMVD 442
VS + LF +G ++G LG G+ ++V P+++ + +KSV G H+ + D
Sbjct: 11 VSAAAVLFAWGANSYGQLGLGHKEDVLLPQQLSDFCKSGCIKSVTGGGGHSVVVTD---- 66
Query: 443 RCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGL 502
GG LF G G+LG E L T L+ Q +CG T+ LT
Sbjct: 67 -------GGGLFVCGLNKDGQLGLGHTEEVLRFTICKPLLGCPIRQVACGWDFTIMLTEK 119
Query: 503 GKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGK 562
G+V + GS GQLG P + + + E V +++G H T GS + WG
Sbjct: 120 GQVLSCGSNAFGQLGVPHGPRKCVVPQAIECLREKVVCVAAGLRHALATTDTGSTFQWGT 179
Query: 563 N-ANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGD 613
A+ L Q P F+ A +V + + + A S S+ D
Sbjct: 180 GLASSGRRLCPGQN--LPLFLTAKEPSRVTGLESSTVVCAVAGSDHSASLTD 229
Score = 124 (48.7 bits), Expect = 0.00022, P = 0.00022
Identities = 33/125 (26%), Positives = 57/125 (45%)
Query: 505 VYTMGSAVHGQLGNPKAKDRSITV-VEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKN 563
++ G+ +GQLG +D + + K +K ++ G H V+T GG ++ G N
Sbjct: 17 LFAWGANSYGQLGLGHKEDVLLPQQLSDFCKSGCIKSVTGGGGHSVVVTDGGGLFVCGLN 76
Query: 564 ANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMP 623
+GQLGLG ++E T + L + V CG T + + ++ Q +P
Sbjct: 77 KDGQLGLGHTEEVLRFTICKPLLGCPIRQVACGWDFTIMLTEKGQVLSCGSNAFGQLGVP 136
Query: 624 FGFRR 628
G R+
Sbjct: 137 HGPRK 141
>UNIPROTKB|I3L8I2 [details] [associations]
symbol:LOC100737658 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA]
InterPro:IPR000719 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104137 Ensembl:ENSSSCT00000025619
Uniprot:I3L8I2
Length = 676
Score = 242 (90.2 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 80/275 (29%), Positives = 123/275 (44%)
Query: 344 GADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGH 403
GA L G + + GV + VACG+ TA ++ G + T+G G+ G LGH
Sbjct: 357 GALLPGAIEQPQPQFVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGH 416
Query: 404 GNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGR 463
G+L ++SQP VE+L G ++ VACG H A+ +R +LF WG D GR
Sbjct: 417 GSLNDISQPTIVEALLGYEMVQVACGASHVLAL---STER--------ELFAWGRGDGGR 465
Query: 464 LGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG-NP--- 519
LG E P V + + CG ++ LT G+ GS +LG +P
Sbjct: 466 LGLGTRESHCCPQLVPMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLDPLSL 525
Query: 520 -------KAKDRSITVV---EGKLKEEFVKGISSGSYHVAVLT-SGGSVYTWGKNANGQL 568
+ + ++T L +E + + G+ H A +T + G YT+G NA
Sbjct: 526 GEEPAPHQQVEEAVTFTPLGSAPLDQEPLLSVDLGTAHSAAVTXASGDCYTFGSNAR--- 582
Query: 569 GLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
+ P V+ L+ ++ +V CG + T AI
Sbjct: 583 -----RVSRAPCRVQGLQGIKISTVACGDAFTVAI 612
Score = 238 (88.8 bits), Expect = 3.1e-16, P = 3.1e-16
Identities = 75/302 (24%), Positives = 128/302 (42%)
Query: 229 LGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGE 288
LG G + G++ Q + Q + + LE + +++++ G A +T G + +G
Sbjct: 352 LGAGGGALLPGAIEQPQPQ---FVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGS 408
Query: 289 GKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLV 348
G +G LGH D+S P +VE L G + V+CG AL+ E++ WG + G +
Sbjct: 409 GSNGCLGHGSLNDISQPTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDGGRLGL 468
Query: 349 GERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN 408
G R S H P+ L G +V CG + I++ GQ G F LG L
Sbjct: 469 GTRES--HCCPQ-LVPMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLDPLSL 525
Query: 409 VSQPKEVESLR-GLKVKSVACGPWHTAAIVDIMVDRCKSNAI---GGKLFTWGDADKGRL 464
+P + + + + P ++ + + S A+ G +T+G ++ R+
Sbjct: 526 GEEPAPHQQVEEAVTFTPLGSAPLDQEPLLSVDLGTAHSAAVTXASGDCYTFG-SNARRV 584
Query: 465 GHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDR 524
P V L +CG TV + G+V++ G G+LG K +D
Sbjct: 585 SRA-------PCRVQGLQGIKISTVACGDAFTVAIGAEGEVFSWGKGARGRLGR-KDEDA 636
Query: 525 SI 526
+
Sbjct: 637 GL 638
Score = 198 (74.8 bits), Expect = 6.7e-12, P = 6.7e-12
Identities = 79/301 (26%), Positives = 128/301 (42%)
Query: 306 KLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDT 365
+ +E SG+ ++ V+CG+ T LT G I T+G ++G G S P + +
Sbjct: 374 RFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLNDISQ--PT-IVEA 430
Query: 366 LDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKS 425
L G + +VACG H +ST +LF +G G G LG G ++ P+ V G + +
Sbjct: 431 LLGYEMVQVACGASHVLALSTERELFAWGRGDGGRLGLGTRESHCCPQLVPMPPGQEAQR 490
Query: 426 VACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFD 485
V CG ++ I+ + ++ A G F D LG + + VT
Sbjct: 491 VVCGI-DSSMILTVPG---QALACGSNRFNKLGLDPLSLGEEPAPHQQVEEAVT-FTPLG 545
Query: 486 FVQASCGRMLTVGL-TGLGKVYTMGSAVHGQLG-NPKAKDRSITVVEGKLKEEFVKGISS 543
+L+V L T T S G N + R+ V+G L+ + ++
Sbjct: 546 SAPLDQEPLLSVDLGTAHSAAVTXASGDCYTFGSNARRVSRAPCRVQG-LQGIKISTVAC 604
Query: 544 GSYHVAVLTSGGSVYTWGKNANGQLGLGDSQER-ETPTFVEALRDRQVESVVC--GSSIT 600
G + + G V++WGK A G+LG D P ++ V SV C G+++
Sbjct: 605 GDAFTVAIGAEGEVFSWGKGARGRLGRKDEDAGLPRPVQLDETHPYTVTSVSCCHGNTLL 664
Query: 601 A 601
A
Sbjct: 665 A 665
>UNIPROTKB|I3L5B6 [details] [associations]
symbol:LOC100737658 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA]
InterPro:IPR000719 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104137 Ensembl:ENSSSCT00000029356 OMA:PEREMAM
Uniprot:I3L5B6
Length = 680
Score = 242 (90.2 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 80/275 (29%), Positives = 123/275 (44%)
Query: 344 GADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGH 403
GA L G + + GV + VACG+ TA ++ G + T+G G+ G LGH
Sbjct: 361 GALLPGAIEQPQPQFVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGH 420
Query: 404 GNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGR 463
G+L ++SQP VE+L G ++ VACG H A+ +R +LF WG D GR
Sbjct: 421 GSLNDISQPTIVEALLGYEMVQVACGASHVLAL---STER--------ELFAWGRGDGGR 469
Query: 464 LGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG-NP--- 519
LG E P V + + CG ++ LT G+ GS +LG +P
Sbjct: 470 LGLGTRESHCCPQLVPMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLDPLSL 529
Query: 520 -------KAKDRSITVV---EGKLKEEFVKGISSGSYHVAVLT-SGGSVYTWGKNANGQL 568
+ + ++T L +E + + G+ H A +T + G YT+G NA
Sbjct: 530 GEEPAPHQQVEEAVTFTPLGSAPLDQEPLLSVDLGTAHSAAVTXASGDCYTFGSNAR--- 586
Query: 569 GLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
+ P V+ L+ ++ +V CG + T AI
Sbjct: 587 -----RVSRAPCRVQGLQGIKISTVACGDAFTVAI 616
Score = 238 (88.8 bits), Expect = 3.2e-16, P = 3.2e-16
Identities = 75/302 (24%), Positives = 128/302 (42%)
Query: 229 LGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGE 288
LG G + G++ Q + Q + + LE + +++++ G A +T G + +G
Sbjct: 356 LGAGGGALLPGAIEQPQPQ---FVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGS 412
Query: 289 GKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLV 348
G +G LGH D+S P +VE L G + V+CG AL+ E++ WG + G +
Sbjct: 413 GSNGCLGHGSLNDISQPTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDGGRLGL 472
Query: 349 GERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN 408
G R S H P+ L G +V CG + I++ GQ G F LG L
Sbjct: 473 GTRES--HCCPQ-LVPMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLDPLSL 529
Query: 409 VSQPKEVESLR-GLKVKSVACGPWHTAAIVDIMVDRCKSNAI---GGKLFTWGDADKGRL 464
+P + + + + P ++ + + S A+ G +T+G ++ R+
Sbjct: 530 GEEPAPHQQVEEAVTFTPLGSAPLDQEPLLSVDLGTAHSAAVTXASGDCYTFG-SNARRV 588
Query: 465 GHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDR 524
P V L +CG TV + G+V++ G G+LG K +D
Sbjct: 589 SRA-------PCRVQGLQGIKISTVACGDAFTVAIGAEGEVFSWGKGARGRLGR-KDEDA 640
Query: 525 SI 526
+
Sbjct: 641 GL 642
Score = 198 (74.8 bits), Expect = 6.8e-12, P = 6.8e-12
Identities = 79/301 (26%), Positives = 128/301 (42%)
Query: 306 KLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDT 365
+ +E SG+ ++ V+CG+ T LT G I T+G ++G G S P + +
Sbjct: 378 RFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLNDISQ--PT-IVEA 434
Query: 366 LDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKS 425
L G + +VACG H +ST +LF +G G G LG G ++ P+ V G + +
Sbjct: 435 LLGYEMVQVACGASHVLALSTERELFAWGRGDGGRLGLGTRESHCCPQLVPMPPGQEAQR 494
Query: 426 VACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFD 485
V CG ++ I+ + ++ A G F D LG + + VT
Sbjct: 495 VVCGI-DSSMILTVPG---QALACGSNRFNKLGLDPLSLGEEPAPHQQVEEAVT-FTPLG 549
Query: 486 FVQASCGRMLTVGL-TGLGKVYTMGSAVHGQLG-NPKAKDRSITVVEGKLKEEFVKGISS 543
+L+V L T T S G N + R+ V+G L+ + ++
Sbjct: 550 SAPLDQEPLLSVDLGTAHSAAVTXASGDCYTFGSNARRVSRAPCRVQG-LQGIKISTVAC 608
Query: 544 GSYHVAVLTSGGSVYTWGKNANGQLGLGDSQER-ETPTFVEALRDRQVESVVC--GSSIT 600
G + + G V++WGK A G+LG D P ++ V SV C G+++
Sbjct: 609 GDAFTVAIGAEGEVFSWGKGARGRLGRKDEDAGLPRPVQLDETHPYTVTSVSCCHGNTLL 668
Query: 601 A 601
A
Sbjct: 669 A 669
>UNIPROTKB|Q74AS9 [details] [associations]
symbol:GSU2272 "ATS1 domain repeat lipoprotein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 RefSeq:NP_953321.1
ProteinModelPortal:Q74AS9 GeneID:2686981 KEGG:gsu:GSU2272
PATRIC:22027399 HOGENOM:HOG000020996 OMA:TGTALAW
BioCyc:GSUL243231:GH27-2248-MONOMER Uniprot:Q74AS9
Length = 403
Score = 235 (87.8 bits), Expect = 1.6e-16, P = 1.6e-16
Identities = 95/404 (23%), Positives = 158/404 (39%)
Query: 190 ADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVD 249
AD P ++S + +P Y + + + + +WG G +G DG T
Sbjct: 23 ADGDLPYSDSTSISSPAYSHSAVFQN--MTTLAVWGNNE-SGQLG---DG------TTTS 70
Query: 250 ALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVF---CWGEGKDGRLGHK-VNMDVSC- 304
A PK L + GA H + + V WG G++G + S
Sbjct: 71 AATPKRLRLGFATYSSGFATGASHTLAIARFDNVSGVRAWGSNSAGQIGRDPATVPTSST 130
Query: 305 PKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFD 364
P + G VQ V+ G + AL G ++ WG N+ G + S + + PR++
Sbjct: 131 PVKIGGFGGA-VQQVAAGGLHSMALA-GGTVWAWGSNSAGQLALNPISSATRFAPRQVET 188
Query: 365 TLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVK 424
+ + + G H+ I TS + + +G+ G LG+G + P++V+ + ++
Sbjct: 189 AKLPIAPTAIVAGGSHS-IAYTSTEAYAWGNNASGQLGNGTTLSNHMPQKVQLPSSITIR 247
Query: 425 SVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDF 484
++ G H A+ D G ++ WG G+LG+ + P +T
Sbjct: 248 KISAGGSHNLAL-----DST------GAIWAWGSNAYGQLGNGTTTNQSTPVQLTLPAGV 296
Query: 485 D-FVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDR-SITVVEGKLKEEFV---K 539
F+ G +V + VYT G G L D+ S V F +
Sbjct: 297 TGFIDVFAGPSHSVAVASNFTVYTWGFNTLGLLSVGTTGDQLSPAQVRDASNVPFTDVER 356
Query: 540 GISSGSYHVAVLTSG-GSVYTWGKNANGQLGLGDSQERETPTFV 582
+ GS+ V +G G ++ WG N GQLG G + R P V
Sbjct: 357 VVLLGSFFTIVKKNGSGGMWAWGYNGYGQLGDGTTSNRTAPVQV 400
Score = 186 (70.5 bits), Expect = 4.7e-11, P = 4.7e-11
Identities = 86/355 (24%), Positives = 147/355 (41%)
Query: 263 DVQNISLGA-KHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSC 321
D +IS A H+A+ + WG + G+LG + PK + +
Sbjct: 31 DSTSISSPAYSHSAVFQNMTTLAVWGNNESGQLGDGTTTSAATPKRLRLGFATYSSGFAT 90
Query: 322 GEFQTCALTK----SGEIYTWGHNNHGADLVGERRSR--SHWLPRKLFDTLDGVRVSKVA 375
G T A+ + SG + WG N+ G +G + + P K+ G V +VA
Sbjct: 91 GASHTLAIARFDNVSG-VRAWGSNSAGQ--IGRDPATVPTSSTPVKIGGF--GGAVQQVA 145
Query: 376 CGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQ--PKEVESLR-GLKVKSVACGPWH 432
G H+ ++ G ++ +G + G L + + ++ P++VE+ + + ++ G H
Sbjct: 146 AGGLHSMALA-GGTVWAWGSNSAGQLALNPISSATRFAPRQVETAKLPIAPTAIVAGGSH 204
Query: 433 TAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCG 492
+ A + + WG+ G+LG+ +P V + S G
Sbjct: 205 SIAYTST------------EAYAWGNNASGQLGNGTTLSNHMPQKVQLPSSITIRKISAG 252
Query: 493 RMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKG---ISSGSYHVA 549
+ L G ++ GS +GQLGN ++S T V+ L V G + +G H
Sbjct: 253 GSHNLALDSTGAIWAWGSNAYGQLGNGTTTNQS-TPVQLTLPAG-VTGFIDVFAGPSHSV 310
Query: 550 VLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRD---RQVESVVC-GSSIT 600
+ S +VYTWG N G L +G + ++ +P V + VE VV GS T
Sbjct: 311 AVASNFTVYTWGFNTLGLLSVGTTGDQLSPAQVRDASNVPFTDVERVVLLGSFFT 365
Score = 162 (62.1 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 73/294 (24%), Positives = 117/294 (39%)
Query: 303 SCPKLVECLSG----INVQSVSCGEFQTCALTKS-GEIYTWGHNNHGADLVGERRSRSHW 357
SC L C G + S+S + A+ ++ + WG+N G +G+ + S
Sbjct: 15 SCTLLSACADGDLPYSDSTSISSPAYSHSAVFQNMTTLAVWGNNESGQ--LGDGTTTSAA 72
Query: 358 LPRKL---FDTLDGVRVSKVACGEWHTAIVS----TSGQLFTYGDGTFGVLGH--GNLQN 408
P++L F T S A G HT ++ SG + +G + G +G +
Sbjct: 73 TPKRLRLGFATYS----SGFATGASHTLAIARFDNVSG-VRAWGSNSAGQIGRDPATVPT 127
Query: 409 VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG--H 466
S P ++ G V+ VA G H+ A+ GG ++ WG G+L
Sbjct: 128 SSTPVKIGGFGGA-VQQVAAGGLHSMALA------------GGTVWAWGSNSAGQLALNP 174
Query: 467 VDGERKLLPTCV-TRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRS 525
+ + P V T + G ++ T + Y G+ GQLGN
Sbjct: 175 ISSATRFAPRQVETAKLPIAPTAIVAGGSHSIAYTST-EAYAWGNNASGQLGNGTTLSNH 233
Query: 526 ITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETP 579
+ ++ IS+G H L S G+++ WG NA GQLG G + + TP
Sbjct: 234 MPQKVQLPSSITIRKISAGGSHNLALDSTGAIWAWGSNAYGQLGNGTTTNQSTP 287
Score = 152 (58.6 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 63/245 (25%), Positives = 96/245 (39%)
Query: 367 DGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSV 426
D +S A H+A+ L +G+ G LG G + + PK +
Sbjct: 31 DSTSISSPAYS--HSAVFQNMTTLAVWGNNESGQLGDGTTTSAATPKRLRLGFATYSSGF 88
Query: 427 ACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVT--RLVDF 484
A G HT AI N G + WG G++G + +PT T ++ F
Sbjct: 89 ATGASHTLAIARF------DNVSGVR--AWGSNSAGQIGR---DPATVPTSSTPVKIGGF 137
Query: 485 DFV--QASCGRMLTVGLTGLGKVYTMGSAVHGQLG-NPKAKDRSIT---VVEGKLKEEFV 538
Q + G + ++ L G G V+ GS GQL NP + V KL
Sbjct: 138 GGAVQQVAAGGLHSMALAG-GTVWAWGSNSAGQLALNPISSATRFAPRQVETAKLPIAPT 196
Query: 539 KGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSS 598
++ GS+ +A ++ Y WG NA+GQLG G + P V+ + + G S
Sbjct: 197 AIVAGGSHSIAYTST--EAYAWGNNASGQLGNGTTLSNHMPQKVQLPSSITIRKISAGGS 254
Query: 599 ITAAI 603
A+
Sbjct: 255 HNLAL 259
>TIGR_CMR|GSU_2272 [details] [associations]
symbol:GSU_2272 "lipoprotein, putative" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 RefSeq:NP_953321.1
ProteinModelPortal:Q74AS9 GeneID:2686981 KEGG:gsu:GSU2272
PATRIC:22027399 HOGENOM:HOG000020996 OMA:TGTALAW
BioCyc:GSUL243231:GH27-2248-MONOMER Uniprot:Q74AS9
Length = 403
Score = 235 (87.8 bits), Expect = 1.6e-16, P = 1.6e-16
Identities = 95/404 (23%), Positives = 158/404 (39%)
Query: 190 ADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVD 249
AD P ++S + +P Y + + + + +WG G +G DG T
Sbjct: 23 ADGDLPYSDSTSISSPAYSHSAVFQN--MTTLAVWGNNE-SGQLG---DG------TTTS 70
Query: 250 ALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVF---CWGEGKDGRLGHK-VNMDVSC- 304
A PK L + GA H + + V WG G++G + S
Sbjct: 71 AATPKRLRLGFATYSSGFATGASHTLAIARFDNVSGVRAWGSNSAGQIGRDPATVPTSST 130
Query: 305 PKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFD 364
P + G VQ V+ G + AL G ++ WG N+ G + S + + PR++
Sbjct: 131 PVKIGGFGGA-VQQVAAGGLHSMALA-GGTVWAWGSNSAGQLALNPISSATRFAPRQVET 188
Query: 365 TLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVK 424
+ + + G H+ I TS + + +G+ G LG+G + P++V+ + ++
Sbjct: 189 AKLPIAPTAIVAGGSHS-IAYTSTEAYAWGNNASGQLGNGTTLSNHMPQKVQLPSSITIR 247
Query: 425 SVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDF 484
++ G H A+ D G ++ WG G+LG+ + P +T
Sbjct: 248 KISAGGSHNLAL-----DST------GAIWAWGSNAYGQLGNGTTTNQSTPVQLTLPAGV 296
Query: 485 D-FVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDR-SITVVEGKLKEEFV---K 539
F+ G +V + VYT G G L D+ S V F +
Sbjct: 297 TGFIDVFAGPSHSVAVASNFTVYTWGFNTLGLLSVGTTGDQLSPAQVRDASNVPFTDVER 356
Query: 540 GISSGSYHVAVLTSG-GSVYTWGKNANGQLGLGDSQERETPTFV 582
+ GS+ V +G G ++ WG N GQLG G + R P V
Sbjct: 357 VVLLGSFFTIVKKNGSGGMWAWGYNGYGQLGDGTTSNRTAPVQV 400
Score = 186 (70.5 bits), Expect = 4.7e-11, P = 4.7e-11
Identities = 86/355 (24%), Positives = 147/355 (41%)
Query: 263 DVQNISLGA-KHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSC 321
D +IS A H+A+ + WG + G+LG + PK + +
Sbjct: 31 DSTSISSPAYSHSAVFQNMTTLAVWGNNESGQLGDGTTTSAATPKRLRLGFATYSSGFAT 90
Query: 322 GEFQTCALTK----SGEIYTWGHNNHGADLVGERRSR--SHWLPRKLFDTLDGVRVSKVA 375
G T A+ + SG + WG N+ G +G + + P K+ G V +VA
Sbjct: 91 GASHTLAIARFDNVSG-VRAWGSNSAGQ--IGRDPATVPTSSTPVKIGGF--GGAVQQVA 145
Query: 376 CGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQ--PKEVESLR-GLKVKSVACGPWH 432
G H+ ++ G ++ +G + G L + + ++ P++VE+ + + ++ G H
Sbjct: 146 AGGLHSMALA-GGTVWAWGSNSAGQLALNPISSATRFAPRQVETAKLPIAPTAIVAGGSH 204
Query: 433 TAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCG 492
+ A + + WG+ G+LG+ +P V + S G
Sbjct: 205 SIAYTST------------EAYAWGNNASGQLGNGTTLSNHMPQKVQLPSSITIRKISAG 252
Query: 493 RMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKG---ISSGSYHVA 549
+ L G ++ GS +GQLGN ++S T V+ L V G + +G H
Sbjct: 253 GSHNLALDSTGAIWAWGSNAYGQLGNGTTTNQS-TPVQLTLPAG-VTGFIDVFAGPSHSV 310
Query: 550 VLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRD---RQVESVVC-GSSIT 600
+ S +VYTWG N G L +G + ++ +P V + VE VV GS T
Sbjct: 311 AVASNFTVYTWGFNTLGLLSVGTTGDQLSPAQVRDASNVPFTDVERVVLLGSFFT 365
Score = 162 (62.1 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 73/294 (24%), Positives = 117/294 (39%)
Query: 303 SCPKLVECLSG----INVQSVSCGEFQTCALTKS-GEIYTWGHNNHGADLVGERRSRSHW 357
SC L C G + S+S + A+ ++ + WG+N G +G+ + S
Sbjct: 15 SCTLLSACADGDLPYSDSTSISSPAYSHSAVFQNMTTLAVWGNNESGQ--LGDGTTTSAA 72
Query: 358 LPRKL---FDTLDGVRVSKVACGEWHTAIVS----TSGQLFTYGDGTFGVLGH--GNLQN 408
P++L F T S A G HT ++ SG + +G + G +G +
Sbjct: 73 TPKRLRLGFATYS----SGFATGASHTLAIARFDNVSG-VRAWGSNSAGQIGRDPATVPT 127
Query: 409 VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG--H 466
S P ++ G V+ VA G H+ A+ GG ++ WG G+L
Sbjct: 128 SSTPVKIGGFGGA-VQQVAAGGLHSMALA------------GGTVWAWGSNSAGQLALNP 174
Query: 467 VDGERKLLPTCV-TRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRS 525
+ + P V T + G ++ T + Y G+ GQLGN
Sbjct: 175 ISSATRFAPRQVETAKLPIAPTAIVAGGSHSIAYTST-EAYAWGNNASGQLGNGTTLSNH 233
Query: 526 ITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETP 579
+ ++ IS+G H L S G+++ WG NA GQLG G + + TP
Sbjct: 234 MPQKVQLPSSITIRKISAGGSHNLALDSTGAIWAWGSNAYGQLGNGTTTNQSTP 287
Score = 152 (58.6 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 63/245 (25%), Positives = 96/245 (39%)
Query: 367 DGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSV 426
D +S A H+A+ L +G+ G LG G + + PK +
Sbjct: 31 DSTSISSPAYS--HSAVFQNMTTLAVWGNNESGQLGDGTTTSAATPKRLRLGFATYSSGF 88
Query: 427 ACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVT--RLVDF 484
A G HT AI N G + WG G++G + +PT T ++ F
Sbjct: 89 ATGASHTLAIARF------DNVSGVR--AWGSNSAGQIGR---DPATVPTSSTPVKIGGF 137
Query: 485 DFV--QASCGRMLTVGLTGLGKVYTMGSAVHGQLG-NPKAKDRSIT---VVEGKLKEEFV 538
Q + G + ++ L G G V+ GS GQL NP + V KL
Sbjct: 138 GGAVQQVAAGGLHSMALAG-GTVWAWGSNSAGQLALNPISSATRFAPRQVETAKLPIAPT 196
Query: 539 KGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSS 598
++ GS+ +A ++ Y WG NA+GQLG G + P V+ + + G S
Sbjct: 197 AIVAGGSHSIAYTST--EAYAWGNNASGQLGNGTTLSNHMPQKVQLPSSITIRKISAGGS 254
Query: 599 ITAAI 603
A+
Sbjct: 255 HNLAL 259
>UNIPROTKB|F1S9B1 [details] [associations]
symbol:SERGEF "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050709 "negative regulation of protein secretion"
evidence=IEA] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR027048 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005730 GO:GO:0045111 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GO:GO:0050709 GeneTree:ENSGT00700000104160 PANTHER:PTHR22870:SF7
EMBL:CU914672 EMBL:CU467662 EMBL:CU693468
Ensembl:ENSSSCT00000014607 OMA:VYQWGTG Uniprot:F1S9B1
Length = 338
Score = 230 (86.0 bits), Expect = 1.6e-16, P = 1.6e-16
Identities = 94/303 (31%), Positives = 135/303 (44%)
Query: 283 VFCWGEGKDGRLGHKVNMDVSCPK-LVE-CLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
+F WG G+LG DV P+ L E C G V+ ++ G + +T G ++ G
Sbjct: 17 LFAWGANSYGQLGLGHKEDVLLPQQLSEFCKPGC-VKRITGGGGHSAIVTDQGSLFVCGL 75
Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
N G +G ++ L +L G + +VACG T I++ +GQ+ + G +FG
Sbjct: 76 NKDGQLGLGHTEDVLYFT---LCKSLLGCPIQQVACGWDFTIILTKNGQVLSCGSNSFGQ 132
Query: 401 LG--HGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
LG HG + V P+ +E R KV S+A G H A G +F WG
Sbjct: 133 LGVPHGPRRCVV-PQAIEVQRE-KVVSIAAGLRHALAAT-----------ASGLVFQWGT 179
Query: 459 --ADKGRLGHVDGERKLL------PTCVTRLVDFDFVQASC---GRMLTVGLTGLGKVYT 507
A GR G+ L P+ VT V + QA C G + LT G++Y
Sbjct: 180 GLASSGRR-LCPGQTLPLFLTAKEPSKVT--VGLENSQAVCVLAGSGHSASLTDAGELYV 236
Query: 508 MGSAVHGQLGNPKAKDRSITVVEG-KLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANG 566
GS HGQL + A +E + + E V + SG H+ T G V+TWG+ G
Sbjct: 237 WGSNKHGQLASQAAFLPLPQKIEAHRFQNEKVAAVWSGWTHLVAQTETGKVFTWGRADYG 296
Query: 567 QLG 569
QLG
Sbjct: 297 QLG 299
Score = 205 (77.2 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 81/279 (29%), Positives = 118/279 (42%)
Query: 249 DALLPKLLESAVMLD-VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKL 307
D LLP+ L V+ I+ G H+A+VT +G +F G KDG+LG DV L
Sbjct: 35 DVLLPQQLSEFCKPGCVKRITGGGGHSAIVTDQGSLFVCGLNKDGQLGLGHTEDVLYFTL 94
Query: 308 VECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLD 367
+ L G +Q V+CG T LTK+G++ + G N+ G L R +P+ + +
Sbjct: 95 CKSLLGCPIQQVACGWDFTIILTKNGQVLSCGSNSFG-QLGVPHGPRRCVVPQAI--EVQ 151
Query: 368 GVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV---LGHGN----LQNVSQPKEVE-SLR 419
+V +A G H + SG +F +G G L G +P +V L
Sbjct: 152 REKVVSIAAGLRHALAATASGLVFQWGTGLASSGRRLCPGQTLPLFLTAKEPSKVTVGLE 211
Query: 420 GLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVT 479
+ V G H+A++ D G+L+ WG G+L L
Sbjct: 212 NSQAVCVLAGSGHSASLTD-----------AGELYVWGSNKHGQLASQAAFLPLPQKIEA 260
Query: 480 RLVDFDFVQAS-CGRMLTVGLTGLGKVYTMGSAVHGQLG 517
+ V A G V T GKV+T G A +GQLG
Sbjct: 261 HRFQNEKVAAVWSGWTHLVAQTETGKVFTWGRADYGQLG 299
Score = 181 (68.8 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 76/274 (27%), Positives = 119/274 (43%)
Query: 335 IYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYG 394
++ WG N++G +G LP++L + V ++ G H+AIV+ G LF G
Sbjct: 17 LFAWGANSYGQ--LGLGHKEDVLLPQQLSEFCKPGCVKRITGGGGHSAIVTDQGSLFVCG 74
Query: 395 DGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLF 454
G LG G+ ++V +SL G ++ VACG W D + K+ G++
Sbjct: 75 LNKDGQLGLGHTEDVLYFTLCKSLLGCPIQQVACG-W------DFTIILTKN----GQVL 123
Query: 455 TWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS--AV 512
+ G G+LG G R+ + + V + G + T G V+ G+ A
Sbjct: 124 SCGSNSFGQLGVPHGPRRCVVPQAIEVQREKVVSIAAGLRHALAATASGLVFQWGTGLAS 183
Query: 513 HGQLGNP--------KAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNA 564
G+ P AK+ S V G L+ + +GS H A LT G +Y WG N
Sbjct: 184 SGRRLCPGQTLPLFLTAKEPSKVTV-G-LENSQAVCVLAGSGHSASLTDAGELYVWGSNK 241
Query: 565 NGQLGLGDSQERETPTFVEALR--DRQVESVVCG 596
+GQL + P +EA R + +V +V G
Sbjct: 242 HGQLA-SQAAFLPLPQKIEAHRFQNEKVAAVWSG 274
Score = 178 (67.7 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 64/219 (29%), Positives = 96/219 (43%)
Query: 390 LFTYGDGTFGVLGHGNLQNVSQPKEV-ESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNA 448
LF +G ++G LG G+ ++V P+++ E + VK + G H+A + D
Sbjct: 17 LFAWGANSYGQLGLGHKEDVLLPQQLSEFCKPGCVKRITGGGGHSAIVTD---------- 66
Query: 449 IGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTM 508
G LF G G+LG E L T L+ Q +CG T+ LT G+V +
Sbjct: 67 -QGSLFVCGLNKDGQLGLGHTEDVLYFTLCKSLLGCPIQQVACGWDFTIILTKNGQVLSC 125
Query: 509 GSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
GS GQLG P R + +++ E V I++G H T+ G V+ WG
Sbjct: 126 GSNSFGQLGVPHGPRRCVVPQAIEVQREKVVSIAAGLRHALAATASGLVFQWGT------ 179
Query: 569 GLGDSQERETP--TFVEALRDRQVESVVCGSSITAAICL 605
GL S R P T L ++ V G + A+C+
Sbjct: 180 GLASSGRRLCPGQTLPLFLTAKEPSKVTVGLENSQAVCV 218
Score = 131 (51.2 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 36/125 (28%), Positives = 61/125 (48%)
Query: 505 VYTMGSAVHGQLGNPKAKDRSITVVEGKL-KEEFVKGISSGSYHVAVLTSGGSVYTWGKN 563
++ G+ +GQLG +D + + K VK I+ G H A++T GS++ G N
Sbjct: 17 LFAWGANSYGQLGLGHKEDVLLPQQLSEFCKPGCVKRITGGGGHSAIVTDQGSLFVCGLN 76
Query: 564 ANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMP 623
+GQLGLG +++ T ++L ++ V CG T + + + +S Q +P
Sbjct: 77 KDGQLGLGHTEDVLYFTLCKSLLGCPIQQVACGWDFTIILTKNGQVLSCGSNSFGQLGVP 136
Query: 624 FGFRR 628
G RR
Sbjct: 137 HGPRR 141
>UNIPROTKB|G3V1B4 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CH471064 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 PANTHER:PTHR22870:SF7 UniGene:Hs.32470
HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058 EMBL:AC124078
ProteinModelPortal:G3V1B4 SMR:G3V1B4 Ensembl:ENST00000525422
ArrayExpress:G3V1B4 Bgee:G3V1B4 Uniprot:G3V1B4
Length = 354
Score = 231 (86.4 bits), Expect = 2.0e-16, P = 2.0e-16
Identities = 88/298 (29%), Positives = 131/298 (43%)
Query: 283 VFCWGEGKDGRLGHKVNMDVSCPK-LVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
+F WG G+LG DV P+ L + +V+ ++ G + +T G+++ G N
Sbjct: 17 LFAWGANSYGQLGLGHKEDVLLPQQLNDFCKPRSVRRITGGGGHSAVVTDGGDLFVCGLN 76
Query: 342 NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVL 401
G +G ++ P K +L G + +VACG T +++ +GQ+ + G +FG L
Sbjct: 77 KDGQLGLGHTEDIPYFTPCK---SLFGCPIQQVACGWDFTIMLTENGQVLSCGSNSFGQL 133
Query: 402 G--HGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD- 458
G HG + V P+ +E L KV +A G H A G +F WG
Sbjct: 134 GVPHGPRRCVV-PQAIE-LHKEKVVCIAAGLRHAVAAT-----------ASGIVFQWGTG 180
Query: 459 -ADKGRLGHVDGERKLLPTCV--TRLVDFDFVQASC---GRMLTVGLTGLGKVYTMGSAV 512
A GR L T +R+ + +A C G + LT G+VY GS
Sbjct: 181 LASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNK 240
Query: 513 HGQLGNPKAKDRSITVVEGK-LKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLG 569
HGQL N A +E + E V I SG H+ T G ++TWG+ GQLG
Sbjct: 241 HGQLANEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLG 298
Score = 203 (76.5 bits), Expect = 3.8e-13, P = 3.8e-13
Identities = 87/303 (28%), Positives = 129/303 (42%)
Query: 249 DALLPKLLESAVM-LDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKL 307
D LLP+ L V+ I+ G H+A+VT G++F G KDG+LG D+ P
Sbjct: 35 DVLLPQQLNDFCKPRSVRRITGGGGHSAVVTDGGDLFVCGLNKDGQLGLGHTEDI--PYF 92
Query: 308 VECLS--GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDT 365
C S G +Q V+CG T LT++G++ + G N+ G L R +P+ +
Sbjct: 93 TPCKSLFGCPIQQVACGWDFTIMLTENGQVLSCGSNSFG-QLGVPHGPRRCVVPQAI--E 149
Query: 366 LDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV---LGHGNLQ----NVSQPKEVESL 418
L +V +A G H + SG +F +G G L G +P V L
Sbjct: 150 LHKEKVVCIAAGLRHAVAATASGIVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGL 209
Query: 419 RGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPT-- 476
K V G H+A++ D G+++ WG G+L + E LP
Sbjct: 210 ENSKAMCVLAGSDHSASLTD-----------AGEVYVWGSNKHGQLAN---EAAFLPVPQ 255
Query: 477 -CVTRLVDFDFVQAS-CGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEG-KL 533
+ V A G V T GK++T G A +GQLG R + EG KL
Sbjct: 256 KIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLG------RKLETYEGWKL 309
Query: 534 KEE 536
+++
Sbjct: 310 EKQ 312
Score = 190 (71.9 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 71/279 (25%), Positives = 118/279 (42%)
Query: 328 ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
A + ++ WG N++G +G LP++L D V ++ G H+A+V+
Sbjct: 10 AAPAAAALFAWGANSYGQ--LGLGHKEDVLLPQQLNDFCKPRSVRRITGGGGHSAVVTDG 67
Query: 388 GQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSN 447
G LF G G LG G+ +++ +SL G ++ VACG W IM+
Sbjct: 68 GDLFVCGLNKDGQLGLGHTEDIPYFTPCKSLFGCPIQQVACG-WDFT----IMLTE---- 118
Query: 448 AIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYT 507
G++ + G G+LG G R+ + L V + G V T G V+
Sbjct: 119 --NGQVLSCGSNSFGQLGVPHGPRRCVVPQAIELHKEKVVCIAAGLRHAVAATASGIVFQ 176
Query: 508 MGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISS--------GSYHVAVLTSGGSVYT 559
G+ + G +++ + + V G+ + GS H A LT G VY
Sbjct: 177 WGTGL-ASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYV 235
Query: 560 WGKNANGQLGLGDSQERETPTFVEA--LRDRQVESVVCG 596
WG N +GQL ++ P +EA ++ +V ++ G
Sbjct: 236 WGSNKHGQLA-NEAAFLPVPQKIEAHCFQNEKVTAIWSG 273
Score = 171 (65.3 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 62/224 (27%), Positives = 101/224 (45%)
Query: 390 LFTYGDGTFGVLGHGNLQNVSQPKEVESL-RGLKVKSVACGPWHTAAIVDIMVDRCKSNA 448
LF +G ++G LG G+ ++V P+++ + V+ + G H+A + D
Sbjct: 17 LFAWGANSYGQLGLGHKEDVLLPQQLNDFCKPRSVRRITGGGGHSAVVTD---------- 66
Query: 449 IGGKLFTWGDADKGRLG--HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVY 506
GG LF G G+LG H + P C + L Q +CG T+ LT G+V
Sbjct: 67 -GGDLFVCGLNKDGQLGLGHTEDIPYFTP-CKS-LFGCPIQQVACGWDFTIMLTENGQVL 123
Query: 507 TMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGK---N 563
+ GS GQLG P R + +L +E V I++G H T+ G V+ WG +
Sbjct: 124 SCGSNSFGQLGVPHGPRRCVVPQAIELHKEKVVCIAAGLRHAVAATASGIVFQWGTGLAS 183
Query: 564 ANGQLGLGDSQE----RETPTFVEALRDRQVESVVCGSSITAAI 603
+L G + + P+ V L + + V+ GS +A++
Sbjct: 184 CGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASL 227
Score = 131 (51.2 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 36/125 (28%), Positives = 61/125 (48%)
Query: 505 VYTMGSAVHGQLGNPKAKDRSITV-VEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKN 563
++ G+ +GQLG +D + + K V+ I+ G H AV+T GG ++ G N
Sbjct: 17 LFAWGANSYGQLGLGHKEDVLLPQQLNDFCKPRSVRRITGGGGHSAVVTDGGDLFVCGLN 76
Query: 564 ANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMP 623
+GQLGLG +++ T ++L ++ V CG T + + + +S Q +P
Sbjct: 77 KDGQLGLGHTEDIPYFTPCKSLFGCPIQQVACGWDFTIMLTENGQVLSCGSNSFGQLGVP 136
Query: 624 FGFRR 628
G RR
Sbjct: 137 HGPRR 141
>UNIPROTKB|F1RJL0 [details] [associations]
symbol:WBSCR16 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104312 OMA:MVTLAKS
EMBL:FP326664 RefSeq:XP_003354559.2 Ensembl:ENSSSCT00000008468
GeneID:100513850 KEGG:ssc:100513850 Uniprot:F1RJL0
Length = 470
Score = 233 (87.1 bits), Expect = 4.7e-16, P = 4.7e-16
Identities = 96/332 (28%), Positives = 149/332 (44%)
Query: 290 KDGRLGHKVNMDVS-CPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGA--- 345
KD G++ ++ S P + V VSCG + LT +++ G+N++G
Sbjct: 155 KDKTRGYEYVLEPSPVPLPLHRPQETQVLQVSCGRAHSLVLTDGEGVFSMGNNSYGQCGR 214
Query: 346 DLV-GERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHG 404
+V E S SH + R DG +V +VACG+ H+ ++ G++++ G G G G G
Sbjct: 215 KVVENEIYSESHKVHR--MQDFDG-QVVQVACGQDHSLFLTDKGEVYSCGWGADGQTGLG 271
Query: 405 NLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGR 463
+ S P ++ L G+ V VA T D C + + G LF WG+++ +
Sbjct: 272 HYNITSAPTKLGGDLAGVNVVQVA-----TYG------DCCLAVSADGSLFGWGNSEYLQ 320
Query: 464 LGHV-DGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN--PK 520
L V D + +P C+ QA+CG L G G V+ G + G+ N
Sbjct: 321 LASVTDSTQVNVPRCLPFSGVGQVKQAACGGTGCAVLNGEGHVFVWGYGILGKGPNLVET 380
Query: 521 AKDRSIT-VVEG--KLKEEF-VKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQER 576
A I + G +L E V I G H A LT G ++ WGKN G LG+G +++
Sbjct: 381 ALPEMIPPTLFGLTELNPEVRVSRIRCGLSHFAALTDRGELFVWGKNIRGCLGIGRLEDQ 440
Query: 577 ETPTFVEALRDRQVESVVCGSSITAAICLHKS 608
P V + V+ V CG + + L KS
Sbjct: 441 YFPWRV-TMPGEPVD-VACG--VDHMVTLAKS 468
Score = 205 (77.2 bits), Expect = 5.7e-13, P = 5.7e-13
Identities = 87/295 (29%), Positives = 139/295 (47%)
Query: 221 VMIWGEGV--LGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVT 278
V+ GEGV +G + G V +N+ ++ ++ VQ ++ G H+ +T
Sbjct: 194 VLTDGEGVFSMGNNSYGQCGRKVVENEIYSESHKVHRMQDFDGQVVQ-VACGQDHSLFLT 252
Query: 279 KEGEVFCWGEGKDGR--LGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKS--GE 334
+GEV+ G G DG+ LGH N+ + KL L+G+NV V+ + C L S G
Sbjct: 253 DKGEVYSCGWGADGQTGLGH-YNITSAPTKLGGDLAGVNVVQVAT--YGDCCLAVSADGS 309
Query: 335 IYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGV-RVSKVACGEWHTAIVSTSGQLFTY 393
++ WG++ + L S +PR L GV +V + ACG A+++ G +F +
Sbjct: 310 LFGWGNSEY-LQLASVTDSTQVNVPRCL--PFSGVGQVKQAACGGTGCAVLNGEGHVFVW 366
Query: 394 GDGTFGVLGHG-NLQNVSQPKEVE-SLRGL-------KVKSVACGPWHTAAIVDIMVDRC 444
G +G+LG G NL + P+ + +L GL +V + CG H AA+ D
Sbjct: 367 G---YGILGKGPNLVETALPEMIPPTLFGLTELNPEVRVSRIRCGLSHFAALTD------ 417
Query: 445 KSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCG--RMLTV 497
G+LF WG +G LG E + P VT + + V +CG M+T+
Sbjct: 418 -----RGELFVWGKNIRGCLGIGRLEDQYFPWRVT--MPGEPVDVACGVDHMVTL 465
Score = 162 (62.1 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 90/337 (26%), Positives = 142/337 (42%)
Query: 207 YGSPLIERKDILKDVM-IWGEGV-LGGDIG---GAVDGSVSQNKTQVDALLPKLLESAVM 261
YG L+ K +DV +WG G+ +G D + + +P L
Sbjct: 122 YGFTLLSSKT--RDVTKVWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVPLPLHRPQE 179
Query: 262 LDVQNISLGAKHAALVTKEGE-VFCWGEGKDGRLGHKV--NMDVSCPKLVECLSGINVQ- 317
V +S G H+ ++T +GE VF G G+ G KV N S V + + Q
Sbjct: 180 TQVLQVSCGRAHSLVLT-DGEGVFSMGNNSYGQCGRKVVENEIYSESHKVHRMQDFDGQV 238
Query: 318 -SVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC 376
V+CG+ + LT GE+Y+ G G +G S P KL L GV V +VA
Sbjct: 239 VQVACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITS--APTKLGGDLAGVNVVQVAT 296
Query: 377 -GEWHTAIVSTSGQLFTYGDGTFGVLGH-GNLQNVSQPKEVESLRGL-KVKSVACGPWHT 433
G+ A VS G LF +G+ + L + V+ P+ + G+ +VK ACG
Sbjct: 297 YGDCCLA-VSADGSLFGWGNSEYLQLASVTDSTQVNVPRCLP-FSGVGQVKQAACGGTGC 354
Query: 434 AAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHV--DGERKLLPTCVTRLVDFD-FVQAS 490
A + N G +F WG G+ ++ +++P + L + + V+ S
Sbjct: 355 AVL----------NG-EGHVFVWGYGILGKGPNLVETALPEMIPPTLFGLTELNPEVRVS 403
Query: 491 ---CGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDR 524
CG LT G+++ G + G LG + +D+
Sbjct: 404 RIRCGLSHFAALTDRGELFVWGKNIRGCLGIGRLEDQ 440
>UNIPROTKB|F1NXI7 [details] [associations]
symbol:SERGEF "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0050709 "negative regulation of protein
secretion" evidence=IEA] InterPro:IPR027048 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104160 PANTHER:PTHR22870:SF7
EMBL:AADN02030419 EMBL:AADN02030421 EMBL:AADN02030420
IPI:IPI00587804 Ensembl:ENSGALT00000010065 Uniprot:F1NXI7
Length = 231
Score = 212 (79.7 bits), Expect = 5.3e-16, P = 5.3e-16
Identities = 64/197 (32%), Positives = 98/197 (49%)
Query: 249 DALLPKLLE--SAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPK 306
D L+P+LL+ S D+++I+ G H+A++T GE+F G K G+LG DV C
Sbjct: 35 DVLVPQLLKDVSCKCQDIKSIAGGGGHSAVITGAGELFVCGHNKAGQLGLNHTEDVLCFT 94
Query: 307 LVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTL 366
L LSG VQ V+CG T L ++G + + G N G L + S +P+K+ +L
Sbjct: 95 LCTALSGFCVQEVACGWDFTIILGRAGLVLSCGSNAFG-QLGVPQISGPCLIPQKIKQSL 153
Query: 367 DGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV---LGHGNLQNV----SQPKEVESLR 419
V +A G H + SG +F +G G + G V +P E++ L
Sbjct: 154 KEKAVG-IAAGLRHALAATESGLVFQWGTGMASRAKRVHQGKTLPVFWAAKEPCEIKGLE 212
Query: 420 GLKVKSVACGPWHTAAI 436
+KVK VA G +H ++
Sbjct: 213 DVKVKRVAAGSYHCVSL 229
Score = 167 (63.8 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 66/238 (27%), Positives = 105/238 (44%)
Query: 372 SKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVE--SLRGLKVKSVACG 429
+ +AC H+ ++ + + G ++G LG G+ ++V P+ ++ S + +KS+A G
Sbjct: 2 NNIAC---HSHLILRATCVCLKGANSYGQLGLGHKEDVLVPQLLKDVSCKCQDIKSIAGG 58
Query: 430 PWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQA 489
H+A I G+LF G G+LG E L T T L F +
Sbjct: 59 GGHSAVITG-----------AGELFVCGHNKAGQLGLNHTEDVLCFTLCTALSGFCVQEV 107
Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITV--VEGKLKEEFVKGISSGSYH 547
+CG T+ L G V + GS GQLG P+ + ++ LKE+ V GI++G H
Sbjct: 108 ACGWDFTIILGRAGLVLSCGSNAFGQLGVPQISGPCLIPQKIKQSLKEKAV-GIAAGLRH 166
Query: 548 VAVLTSGGSVYTWGKNANGQLGLGDSQERETPTF--------VEALRDRQVESVVCGS 597
T G V+ WG + Q + P F ++ L D +V+ V GS
Sbjct: 167 ALAATESGLVFQWGTGMASR-AKRVHQGKTLPVFWAAKEPCEIKGLEDVKVKRVAAGS 223
Score = 138 (53.6 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 63/242 (26%), Positives = 100/242 (41%)
Query: 271 AKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGI--NVQSVSCGEFQTCA 328
A H+ L+ + V G G+LG DV P+L++ +S +++S++ G +
Sbjct: 5 ACHSHLILRATCVCLKGANSYGQLGLGHKEDVLVPQLLKDVSCKCQDIKSIAGGGGHSAV 64
Query: 329 LTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSG 388
+T +GE++ GHN G +G + L L L G V +VACG T I+ +G
Sbjct: 65 ITGAGELFVCGHNKAGQ--LGLNHTEDV-LCFTLCTALSGFCVQEVACGWDFTIILGRAG 121
Query: 389 QLFTYGDGTFGVLGHGNLQNVSQ-PKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSN 447
+ + G FG LG + P++++ K +A G H A +
Sbjct: 122 LVLSCGSNAFGQLGVPQISGPCLIPQKIKQSLKEKAVGIAAGLRHALAATE--------- 172
Query: 448 AIGGKLFTWGDADKGRLGHVDGERKLLPT-------C-VTRLVDFDFVQASCGRMLTVGL 499
G +F WG R V + K LP C + L D + + G V L
Sbjct: 173 --SGLVFQWGTGMASRAKRVH-QGKTLPVFWAAKEPCEIKGLEDVKVKRVAAGSYHCVSL 229
Query: 500 TG 501
TG
Sbjct: 230 TG 231
>MGI|MGI:2387995 [details] [associations]
symbol:Nek9 "NIMA (never in mitosis gene a)-related
expressed kinase 9" species:10090 "Mus musculus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004672 "protein kinase
activity" evidence=IEA] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006468 "protein phosphorylation"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
[GO:0016310 "phosphorylation" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0016772 "transferase
activity, transferring phosphorus-containing groups" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=ISO] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220 MGI:MGI:2387995
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0019901 GO:GO:0051301 GO:GO:0007067
GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 EMBL:CH466590
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 KO:K08857
GeneTree:ENSGT00700000104074 CTD:91754 HOVERGEN:HBG039572
OMA:GCDGTFL OrthoDB:EOG4NZTSM EMBL:AJ489828 EMBL:BC024926
EMBL:BC117971 EMBL:BC117972 IPI:IPI00169806 RefSeq:NP_660120.2
UniGene:Mm.29071 ProteinModelPortal:Q8K1R7 SMR:Q8K1R7
DIP:DIP-56880N IntAct:Q8K1R7 STRING:Q8K1R7 PhosphoSite:Q8K1R7
PaxDb:Q8K1R7 PRIDE:Q8K1R7 Ensembl:ENSMUST00000040992 GeneID:217718
KEGG:mmu:217718 InParanoid:Q148U2 NextBio:375996 Bgee:Q8K1R7
Genevestigator:Q8K1R7 GermOnline:ENSMUSG00000034290 Uniprot:Q8K1R7
Length = 984
Score = 251 (93.4 bits), Expect = 7.1e-16, Sum P(2) = 7.1e-16
Identities = 83/316 (26%), Positives = 135/316 (42%)
Query: 265 QNISLGAKHAALVTKEGEVFCW-----GEGKDGRLGHKVNMDVSCPKLVECLSGINVQSV 319
+ + G H A+VT E E++ W G G+LGH PK VE L G + V
Sbjct: 372 RQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIHQV 431
Query: 320 SCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEW 379
SCG+ T +T G++Y +G + +G V + P +L L V +V+CG+
Sbjct: 432 SCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGPEVLEPMQLNFFLSNP-VEQVSCGDN 490
Query: 380 HTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDI 439
H +++ + +++++G G +G LG + ++ P+ V+ + L + +V CG T +
Sbjct: 491 HVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALIIVAVQCGCDGTFLLTQS 550
Query: 440 -MVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASC---GRML 495
V C N KL G + H T T F + G+
Sbjct: 551 GKVLACGLNEFN-KLGL-NQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTH 608
Query: 496 TVGLTGLGKVYTMGSAVHGQLGNPKAKDR-SITVVEGKLKEEFVKGISSGSYHVAVLTSG 554
T + G++ T G GQLG K R I ++ G L + V +S G T
Sbjct: 609 TAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDD 668
Query: 555 GSVYTWGKNANGQLGL 570
++ WG NG+L +
Sbjct: 669 NHIFAWGNGGNGRLAM 684
Score = 247 (92.0 bits), Expect = 1.9e-15, Sum P(2) = 1.9e-15
Identities = 87/349 (24%), Positives = 153/349 (43%)
Query: 274 AALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECL-SGINVQSVSCGEFQTCALTKS 332
A + ++ EV+ WG GK S P+ ++ + SG + + V G +T
Sbjct: 340 AVVTSRTSEVYVWGGGK------------STPQKLDVIKSGCSARQVCAGNTHFAVVTVE 387
Query: 333 GEIYTWGHNNHGADLVGE--RRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQL 390
E+YTW + G L G+ ++ + K + L G + +V+CG+ T V+ GQL
Sbjct: 388 KELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQL 447
Query: 391 FTYGDGTFGVLGHGNLQN--VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNA 448
+ +G +G +G + V +P ++ V+ V+CG H +++ R K
Sbjct: 448 YAFGSDYYGCMGVDKVSGPEVLEPMQLNFFLSNPVEQVSCGDNHV-----VVLTRNK--- 499
Query: 449 IGGKLFTWGDADKGRLG-----------HVDGERKLLPTCVTRLVDFDFVQASCGRMLTV 497
++++WG + GRLG VD + L+ V D F+ G++L
Sbjct: 500 ---EVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALIIVAVQCGCDGTFLLTQSGKVLAC 556
Query: 498 GLTGLGKV---YTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSG 554
GL K+ M ++ + + S T+ + +L ++ I+ G H A +
Sbjct: 557 GLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAK-QLSFYKIRTIAPGKTHTAAIDER 615
Query: 555 GSVYTWGKNANGQLGLGDSQERETPTFVEA-LRDRQVESVVCGSSITAA 602
G + T+G N GQLG+G+ ++R + L +QV V CG T A
Sbjct: 616 GRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIA 664
Score = 196 (74.1 bits), Expect = 1.1e-10, Sum P(3) = 1.1e-10
Identities = 76/263 (28%), Positives = 112/263 (42%)
Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQ-VDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
V + EG L G G + +K + L P L + V+ +S G H ++T+
Sbjct: 439 VCVTDEGQLYA-FGSDYYGCMGVDKVSGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTR 497
Query: 280 EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
EV+ WG G+ GRLG D P+ V+ + + +V CG T LT+SG++ G
Sbjct: 498 NKEVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALIIVAVQCGCDGTFLLTQSGKVLACG 557
Query: 340 HNNH---GAD--LVGERRSRS-HWLPRK----LFDTLDGVRVSKVACGEWHTAIVSTSGQ 389
N G + + G + H +P L L ++ +A G+ HTA + G+
Sbjct: 558 LNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGR 617
Query: 390 LFTYGDGTFGVLGHGNLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCKSNA 448
L T+G G LG GN + + L G +V V+CG T A D N
Sbjct: 618 LLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATD-------DNH 670
Query: 449 IGGKLFTWGDADKGRLGHVDGER 471
I F WG+ GRL ER
Sbjct: 671 I----FAWGNGGNGRLAMTPTER 689
Score = 181 (68.8 bits), Expect = 4.1e-09, Sum P(3) = 4.1e-09
Identities = 70/280 (25%), Positives = 125/280 (44%)
Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG-HKVN-MDVSCPKLVEC 310
PK +E + +S G VT EG+++ +G G +G KV+ +V P +
Sbjct: 417 PKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGPEVLEPMQLNF 476
Query: 311 LSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR 370
V+ VSCG+ LT++ E+Y+WG +G +G ++ P+++ D +
Sbjct: 477 FLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGR--LGLDSEEDYYTPQRV-DVPKALI 533
Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTF----------GVLGHGNLQNVSQPKE---VES 417
+ V CG T +++ SG++ G F G++ H V +
Sbjct: 534 IVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQ 593
Query: 418 LRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL-LPT 476
L K++++A G HTAAI D +R G+L T+G G+LG + +++L +
Sbjct: 594 LSFYKIRTIAPGKTHTAAI-D---ER-------GRLLTFGCNKCGQLGVGNYKKRLGINL 642
Query: 477 CVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
L ++ SCG T+ T ++ G+ +G+L
Sbjct: 643 LGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRL 682
Score = 53 (23.7 bits), Expect = 1.1e-10, Sum P(3) = 1.1e-10
Identities = 34/103 (33%), Positives = 45/103 (43%)
Query: 525 SITVVEGKLKEEFVKGISSG-SYHVAVLTS--GGSVYTWGKNANGQLGLG-DSQ-ERETP 579
+I +VE L + ++ SSG S V +S GG + G G G DSQ E ETP
Sbjct: 720 TILIVEKVLNSKTIRSNSSGLSIGTVVQSSSPGGGIGGGGGGGGGGGGEEEDSQQESETP 779
Query: 580 TFVEALR-----DRQVESVVCGSSITAAICLHKSISVGDQSSC 617
R DR +E ++ S T A+ S G SSC
Sbjct: 780 DPSGGFRGTMEADRGMEGLI---SPTEAV----GNSCGASSSC 815
Score = 38 (18.4 bits), Expect = 7.1e-16, Sum P(2) = 7.1e-16
Identities = 10/29 (34%), Positives = 17/29 (58%)
Query: 811 EEVQRLRDQARNLEKQCQIGNQKVQECQQ 839
EE Q+L+ + + Q Q N+K++ QQ
Sbjct: 916 EEQQKLQQENLQMFTQLQKLNKKLEGGQQ 944
>UNIPROTKB|Q96I51 [details] [associations]
symbol:WBSCR16 "Williams-Beuren syndrome chromosomal region
16 protein" species:9606 "Homo sapiens" [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 Orphanet:904 MIM:194050
EMBL:AF410455 EMBL:AL136804 EMBL:CH471292 EMBL:BC007823
EMBL:BC019008 IPI:IPI00305992 RefSeq:NP_110425.1 UniGene:Hs.723684
ProteinModelPortal:Q96I51 SMR:Q96I51 IntAct:Q96I51 STRING:Q96I51
PhosphoSite:Q96I51 DMDM:116242843 PaxDb:Q96I51 PeptideAtlas:Q96I51
PRIDE:Q96I51 DNASU:81554 Ensembl:ENST00000329959 GeneID:81554
KEGG:hsa:81554 UCSC:uc003ubr.3 CTD:81554 GeneCards:GC07M074456
HGNC:HGNC:14948 neXtProt:NX_Q96I51 PharmGKB:PA37941
HOGENOM:HOG000232125 HOVERGEN:HBG054246 InParanoid:Q96I51
OMA:MVTLAKS OrthoDB:EOG4F1X33 PhylomeDB:Q96I51 ChiTaRS:WBSCR16
GenomeRNAi:81554 NextBio:71806 ArrayExpress:Q96I51 Bgee:Q96I51
CleanEx:HS_WBSCR16 Genevestigator:Q96I51 GermOnline:ENSG00000174374
Uniprot:Q96I51
Length = 464
Score = 230 (86.0 bits), Expect = 9.6e-16, P = 9.6e-16
Identities = 107/374 (28%), Positives = 163/374 (43%)
Query: 264 VQNISLGAKHAALVTKEGEVF-CWGEG--KDGRLG-HKVNMD-------------VSCPK 306
+ + + G L +K +V WG G KD +LG H+ D VS P
Sbjct: 109 ISSAACGYGFTLLSSKTADVTKVWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVSLP- 167
Query: 307 LVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGA---DLV-GERRSRSHWLPRKL 362
++ V VSCG + LT +++ G+N++G +V E S SH + R
Sbjct: 168 -LDRPQETRVLQVSCGRAHSLVLTDREGVFSMGNNSYGQCGRKVVENEIYSESHRVHR-- 224
Query: 363 FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVES-LRGL 421
DG +V +VACG+ H+ ++ G++++ G G G G G+ S P ++ L G+
Sbjct: 225 MQDFDG-QVVQVACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSSPTKLGGDLAGV 283
Query: 422 KVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHV-DGERKLLPTCVTR 480
V VA T D C + + G LF WG+++ +L V D + +P C+
Sbjct: 284 NVIQVA-----TYG------DCCLAVSADGGLFGWGNSEYLQLASVTDSTQVNVPRCLHF 332
Query: 481 LVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN--PKAKDRSITVVEGKLKE--- 535
QA+CG L G G V+ G + G+ N A I L E
Sbjct: 333 SGVGKVRQAACGGTGCAVLNGEGHVFVWGYGILGKGPNLVESAVPEMIPPTLFGLTEFNP 392
Query: 536 EF-VKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVV 594
E V I G H A LT+ G ++ WGKN G LG+G +++ P V + V+ V
Sbjct: 393 EIQVSRIRCGLSHFAALTNKGELFVWGKNIRGCLGIGRLEDQYFPWRV-TMPGEPVD-VA 450
Query: 595 CGSSITAAICLHKS 608
CG + + L KS
Sbjct: 451 CG--VDHMVTLAKS 462
Score = 161 (61.7 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 53/210 (25%), Positives = 91/210 (43%)
Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
G DG + + KL ++V ++ V+ +G +F WG + +
Sbjct: 255 GWGADGQTGLGHYNITSSPTKLGGDLAGVNVIQVATYGDCCLAVSADGGLFGWGNSEYLQ 314
Query: 294 LGHKVNM-DVSCPKLVECLSGIN-VQSVSCGEFQTCALTKSGEIYTWGHN--NHGADLVG 349
L + V+ P+ + SG+ V+ +CG L G ++ WG+ G +LV
Sbjct: 315 LASVTDSTQVNVPRCLH-FSGVGKVRQAACGGTGCAVLNGEGHVFVWGYGILGKGPNLV- 372
Query: 350 ERRSRSHWLPRKLFDTLD---GVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNL 406
+ +P LF + ++VS++ CG H A ++ G+LF +G G LG G L
Sbjct: 373 -ESAVPEMIPPTLFGLTEFNPEIQVSRIRCGLSHFAALTNKGELFVWGKNIRGCLGIGRL 431
Query: 407 QNVSQPKEVESLRGLKVKSVACGPWHTAAI 436
++ P V ++ G V VACG H +
Sbjct: 432 EDQYFPWRV-TMPGEPV-DVACGVDHMVTL 459
Score = 134 (52.2 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 46/150 (30%), Positives = 68/150 (45%)
Query: 244 NKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVS 303
+ TQV+ +P+ L + + V+ + G A++ EG VF WG G G+ + V V
Sbjct: 320 DSTQVN--VPRCLHFSGVGKVRQAACGGTGCAVLNGEGHVFVWGYGILGKGPNLVESAVP 377
Query: 304 --CPK----LVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHW 357
P L E I V + CG ALT GE++ WG N G +G R +
Sbjct: 378 EMIPPTLFGLTEFNPEIQVSRIRCGLSHFAALTNKGELFVWGKNIRGC--LGIGRLEDQY 435
Query: 358 LPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
P ++ T+ G V VACG H ++ S
Sbjct: 436 FPWRV--TMPGEPVD-VACGVDHMVTLAKS 462
>DICTYBASE|DDB_G0278255 [details] [associations]
symbol:DDB_G0278255 "regulator of chromosome
condensation (RCC1) domain-containing protein" species:44689
"Dictyostelium discoideum" [GO:0044351 "macropinocytosis"
evidence=RCA] dictyBase:DDB_G0278255 INTERPRO:IPR000408
Pfam:PF00415 EMBL:AAFI02000023 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 RefSeq:XP_642243.1
ProteinModelPortal:Q54YF9 PRIDE:Q54YF9 EnsemblProtists:DDB0235387
GeneID:8621452 KEGG:ddi:DDB_G0278255 InParanoid:Q54YF9 OMA:DIACGGY
Uniprot:Q54YF9
Length = 514
Score = 230 (86.0 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 70/259 (27%), Positives = 120/259 (46%)
Query: 197 NESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGG---AVDGSVSQNKTQVDALLP 253
N++ + Y L+ KD + WG +GG D S S + D
Sbjct: 175 NDNIISIVSGYEHSLVVTKD--DGIYGWGRNHKN-QLGGRERVKDKSSSPSSPSEDEYYS 231
Query: 254 K----LLES-AVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMD----VSC 304
K L E+ + D + I G+ H L+ +G ++ WG G G LGH V + +
Sbjct: 232 KPIKVLKETDPIFKDFKKICSGSDHNLLLGNDGSLYSWGNGYFGALGHGVGSNDKENIYT 291
Query: 305 PKLVECLSGINVQS----VSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPR 360
PK + + N +S ++CG + + LT EIYT+G+ G GE + +H++P+
Sbjct: 292 PKKITTFTLNNNESRIVDIACGGYHSMFLTNDNEIYTFGYGEFGQLGHGENDTLNHYIPK 351
Query: 361 KLFDTLD---GVRVSKVACGEWHTAI-VSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVE 416
++ T D G ++ + G+ + ++T G ++++G G LGHG +N PK+++
Sbjct: 352 RIKSTGDNAAGNKIKSIFAGDHANSFYITTDGSVYSWGWNDGGSLGHGTNENHYSPKKIQ 411
Query: 417 SLRGLKVKSVACGPWHTAA 435
SL +K + G HT A
Sbjct: 412 SLSN--IKKITSGFKHTLA 428
Score = 186 (70.5 bits), Expect = 8.3e-11, P = 8.3e-11
Identities = 55/210 (26%), Positives = 91/210 (43%)
Query: 317 QSVSCGEFQTCALTKSGEIYTWGHNNHGA--DLVGERRSRSHWLPRKLFD-TLDG--VRV 371
+ + G L G +Y+WG+ GA VG + + P+K+ TL+ R+
Sbjct: 248 KKICSGSDHNLLLGNDGSLYSWGNGYFGALGHGVGSNDKENIYTPKKITTFTLNNNESRI 307
Query: 372 SKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQ--PKEVESL----RGLKVKS 425
+ACG +H+ ++ +++T+G G FG LGHG ++ PK ++S G K+KS
Sbjct: 308 VDIACGGYHSMFLTNDNEIYTFGYGEFGQLGHGENDTLNHYIPKRIKSTGDNAAGNKIKS 367
Query: 426 VACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFD 485
+ G H + I D G +++WG D G LGH E P + L +
Sbjct: 368 IFAGD-HANSFY-ITTD--------GSVYSWGWNDGGSLGHGTNENHYSPKKIQSLSNIK 417
Query: 486 FVQASCGRMLTVGLTGLGKVYTMGSAVHGQ 515
+ + L + +Y G GQ
Sbjct: 418 KITSGFKHTLAQSINN--DIYVFGDNTFGQ 445
Score = 169 (64.5 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 55/204 (26%), Positives = 90/204 (44%)
Query: 451 GKLFTWGDADKGRLGHV----DGERKLLPTCVTRLV----DFDFVQASCGRMLTVGLTGL 502
G L++WG+ G LGH D E P +T + V +CG ++ LT
Sbjct: 264 GSLYSWGNGYFGALGHGVGSNDKENIYTPKKITTFTLNNNESRIVDIACGGYHSMFLTND 323
Query: 503 GKVYTMGSAVHGQLGN----------PKA-KDRSITVVEGKLKEEFVKGISSGSYHVAVL 551
++YT G GQLG+ PK K K+K F G + S+++
Sbjct: 324 NEIYTFGYGEFGQLGHGENDTLNHYIPKRIKSTGDNAAGNKIKSIFA-GDHANSFYI--- 379
Query: 552 TSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISV 611
T+ GSVY+WG N G LG G ++ +P +++L + ++ + G T A ++ I V
Sbjct: 380 TTDGSVYSWGWNDGGSLGHGTNENHYSPKKIQSLSN--IKKITSGFKHTLAQSINNDIYV 437
Query: 612 GDQSSCSQCRMPFGFRRKKHNCYN 635
++ Q + F + +N N
Sbjct: 438 FGDNTFGQTALKFNYNSNNNNDKN 461
Score = 131 (51.2 bits), Expect = 7.9e-05, P = 7.9e-05
Identities = 72/289 (24%), Positives = 118/289 (40%)
Query: 311 LSGINVQSVSCGEFQTCALTKSGEIYTWG-HNNHGADLVGERRSRSHWLPRKLFDTLDGV 369
L+G+ + + + + + ++ E Y WG ++N LV E +P K+ D
Sbjct: 69 LNGLKAKDIFANAYHSGIINENDEFYHWGLYSN----LVTE-------VPNKIKINNDK- 116
Query: 370 RVSKVACGEWHTAIVSTS--GQLFTYGDGTFGVLGHG--------NLQNVSQPKEVESLR 419
++S V+ G + I+ T QL++ G +GVLG G N N + ++E
Sbjct: 117 KISNVSLGG-NFIILQTKDDNQLYSIGKSKYGVLGIGRSIDDDDDNNNNNEKVYKIEKFN 175
Query: 420 GLKVKSVACGPWHTAAIV-DIMV---DRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLP 475
+ S+ G H+ + D + R N +GG+ D + E P
Sbjct: 176 D-NIISIVSGYEHSLVVTKDDGIYGWGRNHKNQLGGRERV-KDKSSSPSSPSEDEYYSKP 233
Query: 476 TCVTRLVD--F-DFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG-----NPKAK---DR 524
V + D F DF + G + L G +Y+ G+ G LG N K +
Sbjct: 234 IKVLKETDPIFKDFKKICSGSDHNLLLGNDGSLYSWGNGYFGALGHGVGSNDKENIYTPK 293
Query: 525 SITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDS 573
IT E + I+ G YH LT+ +YT+G GQLG G++
Sbjct: 294 KITTFTLNNNESRIVDIACGGYHSMFLTNDNEIYTFGYGEFGQLGHGEN 342
>DICTYBASE|DDB_G0282575 [details] [associations]
symbol:DDB_G0282575 "putative GTPase activating
protein (GAP)" species:44689 "Dictyostelium discoideum" [GO:0032851
"positive regulation of Rab GTPase activity" evidence=IEA]
[GO:0032313 "regulation of Rab GTPase activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005097 "Rab GTPase
activator activity" evidence=IEA] InterPro:IPR000195 Pfam:PF00566
PROSITE:PS50086 SMART:SM00164 dictyBase:DDB_G0282575
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AAFI02000047 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5210
GO:GO:0005097 GO:GO:0032851 SUPFAM:SSF47923 RefSeq:XP_640136.1
ProteinModelPortal:Q54SA3 EnsemblProtists:DDB0235329 GeneID:8623673
KEGG:ddi:DDB_G0282575 InParanoid:Q54SA3 OMA:NIVFRIW Uniprot:Q54SA3
Length = 1194
Score = 146 (56.5 bits), Expect = 2.3e-09, Sum P(4) = 2.3e-09
Identities = 52/211 (24%), Positives = 93/211 (44%)
Query: 235 GAVDGSVSQNKTQVDALLPKLLESA---VMLDVQNISLGAKHAALVTKEG---EVFCWGE 288
GA GS+S + T + P + ++ + S A + L K+ +V +G
Sbjct: 285 GATLGSLSSSTTTSNNSTPNTTANNSPNLLSSSSSSSSAATNNELKFKQTTPTKVLSFGG 344
Query: 289 GKDGR-LGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADL 347
D LG +N ++ + + ++ I + +SCG AL+ +Y+WG HG
Sbjct: 345 SNDNNFLGGVINNELQM--MTDQMNSIKIIQISCGSNHILALSDQYHVYSWGSAEHGKLG 402
Query: 348 VGERRS----RSHWL--PRKLFDTLD-GVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
GE S W+ P+K+ + GV V V+ G H ++ + T+G G+ G
Sbjct: 403 HGEDYSFVSQNPRWINSPKKIKSLQEKGVTVISVSSGYSHCMALTLDSGILTWGKGSDGQ 462
Query: 401 LGHGNLQNVSQPKEVESL--RGLKVKSVACG 429
LG G ++ P E++ + + K+ + CG
Sbjct: 463 LGTGFRHDIWSPFEIKRVIDKNEKIVQICCG 493
Score = 139 (54.0 bits), Expect = 8.4e-13, Sum P(4) = 8.4e-13
Identities = 47/169 (27%), Positives = 77/169 (45%)
Query: 452 KLFTWGDA-DKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
K+ ++G + D LG V + T ++ +Q SCG + L+ VY+ GS
Sbjct: 338 KVLSFGGSNDNNFLGGVINNELQMMT--DQMNSIKIIQISCGSNHILALSDQYHVYSWGS 395
Query: 511 AVHGQLG----------NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
A HG+LG NP+ + + + K V +SSG H LT + TW
Sbjct: 396 AEHGKLGHGEDYSFVSQNPRWINSPKKIKSLQEKGVTVISVSSGYSHCMALTLDSGILTW 455
Query: 561 GKNANGQLGLGDSQERETPTFVEALRDR--QVESVVCGSSITAAICLHK 607
GK ++GQLG G + +P ++ + D+ ++ + CG + I L K
Sbjct: 456 GKGSDGQLGTGFRHDIWSPFEIKRVIDKNEKIVQICCGYFNSFFITLEK 504
Score = 136 (52.9 bits), Expect = 0.00037, Sum P(3) = 0.00037
Identities = 42/130 (32%), Positives = 66/130 (50%)
Query: 452 KLFTWGDADKGRLGHVDGERKLL-PTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
++F WG G G++ ++ P V L + VQ SCG T+ L+ G +Y+ GS
Sbjct: 11 QIFYWGR------GVNQGDKHIIEPIEVPELNKKNIVQLSCGSTHTLVLSDSGDLYSWGS 64
Query: 511 A-VHGQLGNPKAKD--------RSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWG 561
+ GQLG+ +K+ + ++++ L + V +S+G VLT GS+Y WG
Sbjct: 65 SNSSGQLGHGDSKNQYGKPKNIKKFSLIKA-LSGDSVIQVSTGLDFTFVLTDQGSIYNWG 123
Query: 562 KNANGQLGLG 571
N GQL LG
Sbjct: 124 SNIEGQLALG 133
Score = 128 (50.1 bits), Expect = 8.4e-13, Sum P(4) = 8.4e-13
Identities = 38/139 (27%), Positives = 66/139 (47%)
Query: 282 EVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
++F WG G + H + + P+L + N+ +SCG T L+ SG++Y+WG +
Sbjct: 11 QIFYWGRGVNQGDKHIIE-PIEVPEL----NKKNIVQLSCGSTHTLVLSDSGDLYSWGSS 65
Query: 342 NHGADLVGERRSRSHW-LPRK-----LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGD 395
N L G S++ + P+ L L G V +V+ G T +++ G ++ +G
Sbjct: 66 NSSGQL-GHGDSKNQYGKPKNIKKFSLIKALSGDSVIQVSTGLDFTFVLTDQGSIYNWGS 124
Query: 396 GTFGVLGHGNLQNVSQPKE 414
G L G N ++ KE
Sbjct: 125 NIEGQLALGQPVNKNE-KE 142
Score = 127 (49.8 bits), Expect = 1.9e-15, Sum P(4) = 1.9e-15
Identities = 43/141 (30%), Positives = 67/141 (47%)
Query: 219 KDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDAL-LPKLLESAVMLDVQNISLGAKHAALV 277
K + WG GV GD K ++ + +P+L + + VQ +S G+ H ++
Sbjct: 10 KQIFYWGRGVNQGD------------KHIIEPIEVPELNKKNI---VQ-LSCGSTHTLVL 53
Query: 278 TKEGEVFCWGEGKD-GRLGHKVNMD-VSCPK------LVECLSGINVQSVSCGEFQTCAL 329
+ G+++ WG G+LGH + + PK L++ LSG +V VS G T L
Sbjct: 54 SDSGDLYSWGSSNSSGQLGHGDSKNQYGKPKNIKKFSLIKALSGDSVIQVSTGLDFTFVL 113
Query: 330 TKSGEIYTWGHNNHGADLVGE 350
T G IY WG N G +G+
Sbjct: 114 TDQGSIYNWGSNIEGQLALGQ 134
Score = 121 (47.7 bits), Expect = 1.9e-15, Sum P(4) = 1.9e-15
Identities = 39/143 (27%), Positives = 69/143 (48%)
Query: 364 DTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGN-----LQN---VSQPKEV 415
D ++ +++ +++CG H +S ++++G G LGHG QN ++ PK++
Sbjct: 364 DQMNSIKIIQISCGSNHILALSDQYHVYSWGSAEHGKLGHGEDYSFVSQNPRWINSPKKI 423
Query: 416 ESL--RGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL 473
+SL +G+ V SV+ G H C + + + TWG G+LG G R
Sbjct: 424 KSLQEKGVTVISVSSGYSH-----------CMALTLDSGILTWGKGSDGQLG--TGFRHD 470
Query: 474 L--PTCVTRLVDFD--FVQASCG 492
+ P + R++D + VQ CG
Sbjct: 471 IWSPFEIKRVIDKNEKIVQICCG 493
Score = 118 (46.6 bits), Expect = 3.1e-09, Sum P(4) = 3.1e-09
Identities = 36/125 (28%), Positives = 61/125 (48%)
Query: 221 VMIWGEGVLGGDIGGAVDGS-VSQNKTQVDALLPKLLESAVM--LDVQNISLGAKHAALV 277
V WG G +G D S VSQN +++ PK ++S + V ++S G H +
Sbjct: 390 VYSWGSAE-HGKLGHGEDYSFVSQNPRWINS--PKKIKSLQEKGVTVISVSSGYSHCMAL 446
Query: 278 TKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGIN--VQSVSCGEFQTCALT-KSGE 334
T + + WG+G DG+LG D+ P ++ + N + + CG F + +T + E
Sbjct: 447 TLDSGILTWGKGSDGQLGTGFRHDIWSPFEIKRVIDKNEKIVQICCGYFNSFFITLEKRE 506
Query: 335 IYTWG 339
+Y +G
Sbjct: 507 LYQFG 511
Score = 116 (45.9 bits), Expect = 1.3e-10, Sum P(3) = 1.3e-10
Identities = 26/75 (34%), Positives = 42/75 (56%)
Query: 370 RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLG----HGNLQN---VSQPKEVESLRGLK 422
R+ +++ G HT I++ +G+ + G G FG LG H ++ V+ P + +L
Sbjct: 565 RIKQISSGYSHTLILNENGECLSIGQGEFGQLGIPLDHSSIDKDSFVNYPTVIPALLPYF 624
Query: 423 VKSVACGPWHTAAIV 437
V+SV CG WH+ AIV
Sbjct: 625 VESVQCGRWHSVAIV 639
Score = 88 (36.0 bits), Expect = 1.9e-15, Sum P(4) = 1.9e-15
Identities = 26/79 (32%), Positives = 41/79 (51%)
Query: 538 VKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLG---DSQERET----PTFVEALRDRQV 590
+K ISSG H +L G + G+ GQLG+ S ++++ PT + AL V
Sbjct: 566 IKQISSGYSHTLILNENGECLSIGQGEFGQLGIPLDHSSIDKDSFVNYPTVIPALLPYFV 625
Query: 591 ESVVCGSSITAAICLHKSI 609
ESV CG + AI ++++
Sbjct: 626 ESVQCGRWHSVAIVSNRNL 644
Score = 66 (28.3 bits), Expect = 2.4e-09, Sum P(4) = 2.4e-09
Identities = 22/83 (26%), Positives = 34/83 (40%)
Query: 220 DVMIWGEGVLGGDIG-GAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVT 278
D+ WG G +G G + K L K L ++ V S G ++T
Sbjct: 58 DLYSWGSSNSSGQLGHGDSKNQYGKPKNIKKFSLIKALSGDSVIQV---STGLDFTFVLT 114
Query: 279 KEGEVFCWGEGKDGRL--GHKVN 299
+G ++ WG +G+L G VN
Sbjct: 115 DQGSIYNWGSNIEGQLALGQPVN 137
Score = 65 (27.9 bits), Expect = 7.2e-10, Sum P(4) = 7.2e-10
Identities = 35/146 (23%), Positives = 60/146 (41%)
Query: 385 STSGQLFTYG---DGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMV 441
+T ++ ++G D F LG G + N Q + + +K+ ++CG H A+ D
Sbjct: 334 TTPTKVLSFGGSNDNNF--LG-GVINNELQMM-TDQMNSIKIIQISCGSNHILALSDQY- 388
Query: 442 DRCKSNAIGGKLFTWGDADKGRLGH------VDGERKLL--PTCVTRLVD--FDFVQASC 491
+++WG A+ G+LGH V + + P + L + + S
Sbjct: 389 ----------HVYSWGSAEHGKLGHGEDYSFVSQNPRWINSPKKIKSLQEKGVTVISVSS 438
Query: 492 GRMLTVGLTGLGKVYTMGSAVHGQLG 517
G + LT + T G GQLG
Sbjct: 439 GYSHCMALTLDSGILTWGKGSDGQLG 464
Score = 58 (25.5 bits), Expect = 1.9e-12, Sum P(4) = 1.9e-12
Identities = 28/108 (25%), Positives = 47/108 (43%)
Query: 488 QASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA-----KDRSI---TVVEGKLKEEFVK 539
Q S G T+ L G+ ++G GQLG P KD + TV+ L FV+
Sbjct: 568 QISSGYSHTLILNENGECLSIGQGEFGQLGIPLDHSSIDKDSFVNYPTVIPALLPY-FVE 626
Query: 540 GISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRD 587
+ G +H + S ++ N+ L + Q+++ T +E L +
Sbjct: 627 SVQCGRWHSVAIVSNRNLRDHLTNSKK---LKEKQKQKQQTNLEILEE 671
Score = 49 (22.3 bits), Expect = 1.9e-15, Sum P(4) = 1.9e-15
Identities = 12/28 (42%), Positives = 15/28 (53%)
Query: 884 EGVDANLPPKLDTDKHPEVKLPKDRKVD 911
EG +ANLPP L + +K KVD
Sbjct: 957 EGFEANLPPNLPKEYSTFIKTFNMIKVD 984
Score = 42 (19.8 bits), Expect = 8.4e-13, Sum P(4) = 8.4e-13
Identities = 24/93 (25%), Positives = 42/93 (45%)
Query: 735 ESASSLSSGLQRWGQVSCPIRFKTHCHEKSVE-PTPIPKTQMSTHSPLLRKISLGS-NFI 792
E+ LS G +GQ+ P+ + + V PT IP + + + + G + +
Sbjct: 581 ENGECLSIGQGEFGQLGIPLDHSSIDKDSFVNYPTVIPA--LLPY--FVESVQCGRWHSV 636
Query: 793 PIASTVE-KDLSESNKMLNEEVQRLRDQARNLE 824
I S +D ++K L E+ Q+ + Q NLE
Sbjct: 637 AIVSNRNLRDHLTNSKKLKEK-QKQKQQT-NLE 667
Score = 41 (19.5 bits), Expect = 8.3e-05, Sum P(4) = 8.3e-05
Identities = 16/57 (28%), Positives = 30/57 (52%)
Query: 451 GKLFTWGDADKGRLG----H--VDGERKL-LPTCVTRLVDFDFVQA-SCGRMLTVGL 499
G+ + G + G+LG H +D + + PT + L+ + FV++ CGR +V +
Sbjct: 583 GECLSIGQGEFGQLGIPLDHSSIDKDSFVNYPTVIPALLPY-FVESVQCGRWHSVAI 638
Score = 40 (19.1 bits), Expect = 2.3e-09, Sum P(4) = 2.3e-09
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 170 ITPSSPHMETENFMKWELNYADTRCPKNES 199
IT SSP NF+K E+ ++ NE+
Sbjct: 239 ITSSSPFSSVSNFIK-EMVGSNNNNNNNEN 267
>UNIPROTKB|F1Q1C6 [details] [associations]
symbol:WBSCR16 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104312 OMA:MVTLAKS EMBL:AAEX03004216
EMBL:AAEX03004217 Ensembl:ENSCAFT00000018027 Uniprot:F1Q1C6
Length = 465
Score = 226 (84.6 bits), Expect = 2.7e-15, P = 2.7e-15
Identities = 103/374 (27%), Positives = 164/374 (43%)
Query: 264 VQNISLGAKHAALVTKEGEVF-CWGEG--KDGRLG-HKVNMDVS-----------CPKLV 308
+ + + G L +K +V WG G KD +LG H+ + D + P +
Sbjct: 110 ISSAACGYGFTLLSSKTKDVTKVWGMGLNKDSQLGFHRSHKDKTRGYEYVLEPSPVPLPL 169
Query: 309 ECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGA---DLV-GERRSRSHWLPRKLFD 364
+ V VSCG + LT +++ G+N +G ++V E S SH + R
Sbjct: 170 DRPQETRVLQVSCGRAHSLILTDCEGVFSMGNNAYGQCGRNVVENEIYSESHKVNR--MQ 227
Query: 365 TLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVES-LRGLKV 423
DG +V +V CG+ H+ ++ G++++ G G G G G+ S P ++ L G+ V
Sbjct: 228 DFDG-QVVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGLGHYDITSVPTKLGGDLAGVNV 286
Query: 424 KSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHV-DGERKLLPTCVTRLV 482
VA T D C + + G LF WG+++ +L V D + +P C+
Sbjct: 287 VQVA-----TYG------DCCLAVSAEGGLFGWGNSEYLQLASVTDSTQVNVPRCLPFSG 335
Query: 483 DFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSIT-VVEGKL--KEEFVK 539
QA+CG L G G V+ G + G+ P + + V+ L EF
Sbjct: 336 VGKVKQAACGGTGCAVLNGEGHVFVWGYGILGK--GPNLVETAFPEVIPPTLFGLTEFNP 393
Query: 540 GIS-----SGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVV 594
G+ G H A LTS G ++ WGKN G LG+G +++ P V + V+ V
Sbjct: 394 GVHVSHIWCGLSHFAALTSKGELFVWGKNIRGCLGIGRLEDQYFPWRV-TMPGEPVD-VA 451
Query: 595 CGSSITAAICLHKS 608
CG + + L KS
Sbjct: 452 CG--VDHMVTLAKS 463
Score = 170 (64.9 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 57/215 (26%), Positives = 93/215 (43%)
Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
G DG + ++ KL ++V ++ V+ EG +F WG + +
Sbjct: 256 GWGADGQTGLGHYDITSVPTKLGGDLAGVNVVQVATYGDCCLAVSAEGGLFGWGNSEYLQ 315
Query: 294 LGHKVNM-DVSCPKLVECLSGIN-VQSVSCGEFQTCALTKSGEIYTWGHN--NHGADLVG 349
L + V+ P+ + SG+ V+ +CG L G ++ WG+ G +LV
Sbjct: 316 LASVTDSTQVNVPRCLP-FSGVGKVKQAACGGTGCAVLNGEGHVFVWGYGILGKGPNLV- 373
Query: 350 ERRSRSHWLPRKLFDTLD---GVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNL 406
+ +P LF + GV VS + CG H A +++ G+LF +G G LG G L
Sbjct: 374 -ETAFPEVIPPTLFGLTEFNPGVHVSHIWCGLSHFAALTSKGELFVWGKNIRGCLGIGRL 432
Query: 407 QNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMV 441
++ P V ++ G V VACG H + V
Sbjct: 433 EDQYFPWRV-TMPGEPV-DVACGVDHMVTLAKSFV 465
>MGI|MGI:2137600 [details] [associations]
symbol:Wbscr16 "Williams-Beuren syndrome chromosome region
16 homolog (human)" species:10090 "Mus musculus" [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=NAS]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0050790 "regulation
of catalytic activity" evidence=NAS] MGI:MGI:2137600
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GeneTree:ENSGT00700000104312 CTD:81554 HOGENOM:HOG000232125
HOVERGEN:HBG054246 OMA:MVTLAKS OrthoDB:EOG4F1X33 EMBL:AK017733
EMBL:BC024714 EMBL:BC055335 IPI:IPI00111460 RefSeq:NP_291050.1
UniGene:Mm.29508 ProteinModelPortal:Q9CYF5 SMR:Q9CYF5 STRING:Q9CYF5
PhosphoSite:Q9CYF5 PRIDE:Q9CYF5 Ensembl:ENSMUST00000076228
GeneID:94254 KEGG:mmu:94254 InParanoid:Q9CYF5 NextBio:352275
Bgee:Q9CYF5 Genevestigator:Q9CYF5 GermOnline:ENSMUSG00000061979
Uniprot:Q9CYF5
Length = 461
Score = 225 (84.3 bits), Expect = 3.4e-15, P = 3.4e-15
Identities = 93/334 (27%), Positives = 150/334 (44%)
Query: 290 KDGRLGHKVNMDVS-CPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGA--- 345
KD G++ ++ S P ++ V VSCG + LT +++ G+N+HG
Sbjct: 146 KDKTRGYEYVLEPSPVPLPLDRPQETKVLQVSCGRAHSLVLTDREGVFSMGNNSHGQCGR 205
Query: 346 DLV-GERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHG 404
+V E S SH + R DG +V +V CG+ H+ ++ G++++ G G G G G
Sbjct: 206 KVVEDEVYSESHKVHR--MQDFDG-QVVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGLG 262
Query: 405 NLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGR 463
+ S P ++ L G+ V VA T D C + + G +F WG+++ +
Sbjct: 263 HYNITSTPSKLGGDLAGVTVVQVA-----TYG------DCCLALSADGGVFGWGNSEYLQ 311
Query: 464 LGHV-DGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAK 522
L V D + +P C+ Q +CG L G V+ G + G+ PK
Sbjct: 312 LASVTDSTQVNVPRCLPFSGVGKVKQVACGGTGCAVLNAEGHVFVWGYGILGK--GPKLL 369
Query: 523 DRSIT-VVEGKL--KEEF-----VKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQ 574
+ +I ++ L EF V I G H A LT+ G ++ WGKN G LG+G +
Sbjct: 370 ETAIPEMIPPTLFGLTEFNPEVQVSQIRCGLSHFAALTNKGELFVWGKNIRGCLGIGRLE 429
Query: 575 ERETPTFVEALRDRQVESVVCGSSITAAICLHKS 608
++ P V + V+ V CG + + L KS
Sbjct: 430 DQYFPWRV-TMPGEPVD-VACG--VDHMVTLAKS 459
Score = 187 (70.9 bits), Expect = 5.1e-11, P = 5.1e-11
Identities = 75/248 (30%), Positives = 118/248 (47%)
Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGR--LGHKVNMDVSCPKLVECLSGINVQSVSC 321
V + G H+ +T +GEV+ G G DG+ LGH N+ + KL L+G+ V V+
Sbjct: 229 VVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGLGH-YNITSTPSKLGGDLAGVTVVQVAT 287
Query: 322 GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGV-RVSKVACGEWH 380
AL+ G ++ WG++ + L S +PR L GV +V +VACG
Sbjct: 288 YGDCCLALSADGGVFGWGNSEY-LQLASVTDSTQVNVPRCL--PFSGVGKVKQVACGGTG 344
Query: 381 TAIVSTSGQLFTYGDGTFGVLGHG-NLQNVSQPKEVE-SLRGL-------KVKSVACGPW 431
A+++ G +F +G +G+LG G L + P+ + +L GL +V + CG
Sbjct: 345 CAVLNAEGHVFVWG---YGILGKGPKLLETAIPEMIPPTLFGLTEFNPEVQVSQIRCGLS 401
Query: 432 HTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASC 491
H AA+ + K G+LF WG +G LG E + P VT + + V +C
Sbjct: 402 HFAALTN------K-----GELFVWGKNIRGCLGIGRLEDQYFPWRVT--MPGEPVDVAC 448
Query: 492 G--RMLTV 497
G M+T+
Sbjct: 449 GVDHMVTL 456
Score = 178 (67.7 bits), Expect = 5.0e-10, P = 5.0e-10
Identities = 92/336 (27%), Positives = 141/336 (41%)
Query: 207 YGSPLIERKDILKDVM-IWGEGV-LGGDIG---GAVDGSVSQNKTQVDALLPKLLESAVM 261
YG L+ K KDV +WG G+ +G D + + +P L+
Sbjct: 113 YGFTLLSSKT--KDVTKVWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVPLPLDRPQE 170
Query: 262 LDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMD--VSCPKLVECLSGINVQSV 319
V +S G H+ ++T VF G G+ G KV D S V + + Q V
Sbjct: 171 TKVLQVSCGRAHSLVLTDREGVFSMGNNSHGQCGRKVVEDEVYSESHKVHRMQDFDGQVV 230
Query: 320 S--CGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC- 376
CG+ + LT GE+Y+ G G +G S P KL L GV V +VA
Sbjct: 231 QVVCGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITS--TPSKLGGDLAGVTVVQVATY 288
Query: 377 GEWHTAIVSTSGQLFTYGDGTFGVLGH-GNLQNVSQPKEVESLRGL-KVKSVACGPWHTA 434
G+ A+ S G +F +G+ + L + V+ P+ + G+ KVK VACG A
Sbjct: 289 GDCCLAL-SADGGVFGWGNSEYLQLASVTDSTQVNVPRCLP-FSGVGKVKQVACGGTGCA 346
Query: 435 AIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHV--DGERKLLPTCVTRLVDFD-FVQAS- 490
+ NA G +F WG G+ + +++P + L +F+ VQ S
Sbjct: 347 VL----------NA-EGHVFVWGYGILGKGPKLLETAIPEMIPPTLFGLTEFNPEVQVSQ 395
Query: 491 --CGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDR 524
CG LT G+++ G + G LG + +D+
Sbjct: 396 IRCGLSHFAALTNKGELFVWGKNIRGCLGIGRLEDQ 431
Score = 146 (56.5 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 45/152 (29%), Positives = 75/152 (49%)
Query: 244 NKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVS 303
+ TQV+ +P+ L + + V+ ++ G A++ EG VF WG G G+ G K+ ++ +
Sbjct: 317 DSTQVN--VPRCLPFSGVGKVKQVACGGTGCAVLNAEGHVFVWGYGILGK-GPKL-LETA 372
Query: 304 CPKLVE-CLSG-------INVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRS 355
P+++ L G + V + CG ALT GE++ WG N G +G R
Sbjct: 373 IPEMIPPTLFGLTEFNPEVQVSQIRCGLSHFAALTNKGELFVWGKNIRGC--LGIGRLED 430
Query: 356 HWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
+ P ++ T+ G V VACG H ++ S
Sbjct: 431 QYFPWRV--TMPGEPVD-VACGVDHMVTLAKS 459
>MGI|MGI:1351630 [details] [associations]
symbol:Sergef "secretion regulating guanine nucleotide
exchange factor" species:10090 "Mus musculus" [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0005087 "Ran guanyl-nucleotide exchange factor activity"
evidence=ISA] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0050709 "negative regulation of
protein secretion" evidence=ISO] [GO:0050790 "regulation of
catalytic activity" evidence=ISA] InterPro:IPR027048
MGI:MGI:1351630 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0005730 GO:GO:0045111 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0050709
eggNOG:COG5184 GeneTree:ENSGT00700000104160 CTD:26297
HOGENOM:HOG000154414 HOVERGEN:HBG051746 KO:K15421 OMA:NIWAPKP
OrthoDB:EOG4J1183 PANTHER:PTHR22870:SF7 EMBL:AJ243952 EMBL:AK145819
EMBL:AK147848 EMBL:BC049603 EMBL:BC119533 EMBL:BC119534
IPI:IPI00134816 RefSeq:NP_038817.1 UniGene:Mm.76659
ProteinModelPortal:Q80YD6 SMR:Q80YD6 STRING:Q80YD6 PRIDE:Q80YD6
Ensembl:ENSMUST00000033127 GeneID:27414 KEGG:mmu:27414
UCSC:uc009gyp.2 InParanoid:Q80YD6 NextBio:305446 Bgee:Q80YD6
Genevestigator:Q80YD6 GermOnline:ENSMUSG00000030839 Uniprot:Q80YD6
Length = 464
Score = 230 (86.0 bits), Expect = 8.8e-15, Sum P(2) = 8.8e-15
Identities = 91/306 (29%), Positives = 132/306 (43%)
Query: 277 VTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVE--CLSGINVQSVSCGEFQTCALTKSGE 334
V+ +F WG G+LG DV P+ + C +G ++SV+ G + +T G+
Sbjct: 11 VSAAAVLFAWGANSYGQLGLGHKEDVFLPQQLSDFCQAGC-IKSVTGGGGHSAVVTDGGD 69
Query: 335 IYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYG 394
++ G N G +G + K L G + +VACG T +++ GQ+ + G
Sbjct: 70 LFVCGLNKDGQLGLGHTEEVLRFTICK---PLRGCPIRQVACGWDFTIMLTEKGQVLSCG 126
Query: 395 DGTFGVLG--HGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGK 452
FG LG HG + V P+ +E LR KV VA G H A G
Sbjct: 127 SNAFGQLGVPHGPRKCVV-PQAIECLRE-KVVCVAAGLRHALA-----------TTATGS 173
Query: 453 LFTWGD--ADKGRLGHVDGERKLL------PTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
+F WG A GR G+ L P+ VT L + V A G + LT G+
Sbjct: 174 VFQWGTGLASSGRR-LCPGQNLPLFLTAKEPSRVTGLENSTAVCAVAGSDHSASLTDTGE 232
Query: 505 VYTMGSAVHGQLGNPKAKDRSITVVEGK-LKEEFVKGISSGSYHVAVLTSGGSVYTWGKN 563
+Y G HGQL + +E ++E V + SG H+ T G V+TWG+
Sbjct: 233 LYVWGRNKHGQLASRAVFLPLPQRIEAHYFQDEKVTAVWSGWTHLVAKTETGKVFTWGRA 292
Query: 564 ANGQLG 569
GQLG
Sbjct: 293 DYGQLG 298
Score = 224 (83.9 bits), Expect = 4.4e-15, P = 4.4e-15
Identities = 110/408 (26%), Positives = 176/408 (43%)
Query: 249 DALLPKLLESAVMLD-VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKL 307
D LP+ L +++++ G H+A+VT G++F G KDG+LG +V +
Sbjct: 35 DVFLPQQLSDFCQAGCIKSVTGGGGHSAVVTDGGDLFVCGLNKDGQLGLGHTEEVLRFTI 94
Query: 308 VECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLD 367
+ L G ++ V+CG T LT+ G++ + G N G L R +P+ + + L
Sbjct: 95 CKPLRGCPIRQVACGWDFTIMLTEKGQVLSCGSNAFG-QLGVPHGPRKCVVPQAI-ECLR 152
Query: 368 GVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV---LGHG-NLQNVSQPKEVESLRGLKV 423
+V VA G H + +G +F +G G L G NL KE + GL+
Sbjct: 153 E-KVVCVAAGLRHALATTATGSVFQWGTGLASSGRRLCPGQNLPLFLTAKEPSRVTGLEN 211
Query: 424 KSVAC---GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTR 480
+ C G H+A++ D G+L+ WG + + G + LP + +
Sbjct: 212 STAVCAVAGSDHSASLTDT-----------GELYVWG---RNKHGQLASRAVFLP--LPQ 255
Query: 481 LVDFDFVQAS------CGRMLTVGLTGLGKVYTMGSAVHGQLGN----PKAK-----DRS 525
++ + Q G V T GKV+T G A +GQLG P+A+ D S
Sbjct: 256 RIEAHYFQDEKVTAVWSGWTHLVAKTETGKVFTWGRADYGQLGRRLEPPEAQKPVEQDSS 315
Query: 526 ITVV--EGKLKEEF--VKG---ISSGSYH-VAVLTSGGSVYTWGKNANGQLGLGDSQERE 577
+ + + + G IS GS H +AV+ +WG N +G G G
Sbjct: 316 LAFQGPQNSVPSPLHCLTGATEISCGSEHNLAVIRD--KCCSWGWNEHGMCGDGTESNVW 373
Query: 578 TPTFVEAL--RDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMP 623
TPT V+AL ++ V CG+ + A+C + V Q C +P
Sbjct: 374 TPTPVQALPPSPSRLLLVGCGAGHSLAVCQLPAHPVPCQDLKVTCPLP 421
Score = 183 (69.5 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 66/232 (28%), Positives = 101/232 (43%)
Query: 384 VSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESL-RGLKVKSVACGPWHTAAIVDIMVD 442
VS + LF +G ++G LG G+ ++V P+++ + +KSV G H+A + D
Sbjct: 11 VSAAAVLFAWGANSYGQLGLGHKEDVFLPQQLSDFCQAGCIKSVTGGGGHSAVVTD---- 66
Query: 443 RCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGL 502
GG LF G G+LG E L T L Q +CG T+ LT
Sbjct: 67 -------GGDLFVCGLNKDGQLGLGHTEEVLRFTICKPLRGCPIRQVACGWDFTIMLTEK 119
Query: 503 GKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGK 562
G+V + GS GQLG P + + + E V +++G H T+ GSV+ WG
Sbjct: 120 GQVLSCGSNAFGQLGVPHGPRKCVVPQAIECLREKVVCVAAGLRHALATTATGSVFQWGT 179
Query: 563 N-ANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGD 613
A+ L Q P F+ A +V + +++ A S S+ D
Sbjct: 180 GLASSGRRLCPGQN--LPLFLTAKEPSRVTGLENSTAVCAVAGSDHSASLTD 229
Score = 130 (50.8 bits), Expect = 0.00086, Sum P(2) = 0.00086
Identities = 34/125 (27%), Positives = 59/125 (47%)
Query: 505 VYTMGSAVHGQLGNPKAKDRSITV-VEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKN 563
++ G+ +GQLG +D + + + +K ++ G H AV+T GG ++ G N
Sbjct: 17 LFAWGANSYGQLGLGHKEDVFLPQQLSDFCQAGCIKSVTGGGGHSAVVTDGGDLFVCGLN 76
Query: 564 ANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMP 623
+GQLGLG ++E T + LR + V CG T + + ++ Q +P
Sbjct: 77 KDGQLGLGHTEEVLRFTICKPLRGCPIRQVACGWDFTIMLTEKGQVLSCGSNAFGQLGVP 136
Query: 624 FGFRR 628
G R+
Sbjct: 137 HGPRK 141
Score = 37 (18.1 bits), Expect = 8.8e-15, Sum P(2) = 8.8e-15
Identities = 10/47 (21%), Positives = 18/47 (38%)
Query: 697 GSLSEEVKEEKGALTPSRGQSFTSKQSRNVERKPGECLESASSLSSG 743
G L ++ + + S + +N P CL A+ +S G
Sbjct: 295 GQLGRRLEPPEAQKPVEQDSSLAFQGPQNSVPSPLHCLTGATEISCG 341
>UNIPROTKB|E1BIS5 [details] [associations]
symbol:WBSCR16 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104312 CTD:81554 OMA:MVTLAKS
EMBL:DAAA02058190 IPI:IPI00705939 RefSeq:NP_001179275.1
UniGene:Bt.1520 Ensembl:ENSBTAT00000015608 GeneID:513273
KEGG:bta:513273 NextBio:20870790 Uniprot:E1BIS5
Length = 464
Score = 229 (85.7 bits), Expect = 7.1e-15, Sum P(2) = 7.1e-15
Identities = 89/322 (27%), Positives = 147/322 (45%)
Query: 290 KDGRLGHKVNMDVS-CPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGA--- 345
KD G++ ++ S P ++ V VSCG + LT +++ G+N++G
Sbjct: 149 KDKTRGYEYVLEPSPVPLPLDRPQETRVLQVSCGRAHSLVLTDGEGVFSMGNNSYGQCGR 208
Query: 346 DLV-GERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHG 404
+V E S SH + R DG +V +VACG+ H+ ++ G++++ G G G G G
Sbjct: 209 KVVENEIYSESHRVHR--MQDFDG-QVVQVACGQDHSLFLTDQGEVYSCGWGADGQTGLG 265
Query: 405 NLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGR 463
+ S P ++ L G+ V VA T D C + + G LF WG+++ +
Sbjct: 266 HYNITSTPTKLGGDLAGVNVVQVA-----TYG------DCCLAVSADGGLFGWGNSEYLQ 314
Query: 464 LGHV-DGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAK 522
L V D + +P C+ QA+CG L G G V+ G + G+ P
Sbjct: 315 LASVTDSTQVNVPRCLPFSGVGQVKQAACGGTGCAVLNGEGHVFVWGYGILGK--GPNLL 372
Query: 523 DRSIT-VVEGKL--KEEFVKGIS-----SGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQ 574
+ ++ ++ L EF G+ G H A LT+ G ++ WGKN G LG+G +
Sbjct: 373 ETALPEMIPPTLFGLSEFNPGVQVSRIRCGLSHFAALTNRGELFVWGKNIRGCLGIGRLE 432
Query: 575 ERETPTFVEALRDRQVESVVCG 596
++ P V + ++ V CG
Sbjct: 433 DQYFPWRV-TMPGEPMD-VACG 452
Score = 196 (74.1 bits), Expect = 5.4e-12, P = 5.4e-12
Identities = 84/295 (28%), Positives = 138/295 (46%)
Query: 221 VMIWGEGV--LGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVT 278
V+ GEGV +G + G V +N+ ++ ++ VQ ++ G H+ +T
Sbjct: 188 VLTDGEGVFSMGNNSYGQCGRKVVENEIYSESHRVHRMQDFDGQVVQ-VACGQDHSLFLT 246
Query: 279 KEGEVFCWGEGKDGR--LGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKS--GE 334
+GEV+ G G DG+ LGH N+ + KL L+G+NV V+ + C L S G
Sbjct: 247 DQGEVYSCGWGADGQTGLGH-YNITSTPTKLGGDLAGVNVVQVAT--YGDCCLAVSADGG 303
Query: 335 IYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGV-RVSKVACGEWHTAIVSTSGQLFTY 393
++ WG++ + L S +PR L GV +V + ACG A+++ G +F +
Sbjct: 304 LFGWGNSEY-LQLASVTDSTQVNVPRCL--PFSGVGQVKQAACGGTGCAVLNGEGHVFVW 360
Query: 394 GDGTFGVLGHG-NLQNVSQPKEV--------ESLRGLKVKSVACGPWHTAAIVDIMVDRC 444
G +G+LG G NL + P+ + E G++V + CG H AA+ +
Sbjct: 361 G---YGILGKGPNLLETALPEMIPPTLFGLSEFNPGVQVSRIRCGLSHFAALTN------ 411
Query: 445 KSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCG--RMLTV 497
G+LF WG +G LG E + P VT + + + +CG M+T+
Sbjct: 412 -----RGELFVWGKNIRGCLGIGRLEDQYFPWRVT--MPGEPMDVACGVDHMVTL 459
Score = 171 (65.3 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 92/337 (27%), Positives = 144/337 (42%)
Query: 207 YGSPLIERKDILKDVM-IWGEGV-LGGDIG---GAVDGSVSQNKTQVDALLPKLLESAVM 261
YG L+ K KD+ +WG G+ +G D + + +P L+
Sbjct: 116 YGFTLLSSKT--KDITKVWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVPLPLDRPQE 173
Query: 262 LDVQNISLGAKHAALVTKEGE-VFCWGEGKDGRLGHKV--NMDVSCPKLVECLSGINVQ- 317
V +S G H+ ++T +GE VF G G+ G KV N S V + + Q
Sbjct: 174 TRVLQVSCGRAHSLVLT-DGEGVFSMGNNSYGQCGRKVVENEIYSESHRVHRMQDFDGQV 232
Query: 318 -SVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC 376
V+CG+ + LT GE+Y+ G G +G S P KL L GV V +VA
Sbjct: 233 VQVACGQDHSLFLTDQGEVYSCGWGADGQTGLGHYNITS--TPTKLGGDLAGVNVVQVAT 290
Query: 377 -GEWHTAIVSTSGQLFTYGDGTFGVLGH-GNLQNVSQPKEVESLRGL-KVKSVACGPWHT 433
G+ A VS G LF +G+ + L + V+ P+ + G+ +VK ACG
Sbjct: 291 YGDCCLA-VSADGGLFGWGNSEYLQLASVTDSTQVNVPRCLP-FSGVGQVKQAACGGTGC 348
Query: 434 AAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHV--DGERKLLPTCVTRLVDFD-FVQAS 490
A + N G +F WG G+ ++ +++P + L +F+ VQ S
Sbjct: 349 AVL----------NG-EGHVFVWGYGILGKGPNLLETALPEMIPPTLFGLSEFNPGVQVS 397
Query: 491 ---CGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDR 524
CG LT G+++ G + G LG + +D+
Sbjct: 398 RIRCGLSHFAALTNRGELFVWGKNIRGCLGIGRLEDQ 434
Score = 39 (18.8 bits), Expect = 7.1e-15, Sum P(2) = 7.1e-15
Identities = 7/18 (38%), Positives = 9/18 (50%)
Query: 278 TKEGEVFCWGEGKDGRLG 295
T+ +F WG G LG
Sbjct: 56 TRADRIFVWGFSFSGALG 73
>DICTYBASE|DDB_G0276527 [details] [associations]
symbol:DDB_G0276527 "putative bifunctional
serine/threonine-protein kinase/ubiquitin-protein ligase
DDB_G0276527" species:44689 "Dictyostelium discoideum" [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0006468 "protein phosphorylation" evidence=IEA]
[GO:0006464 "cellular protein modification process" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] [GO:0004672 "protein kinase activity"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016310
"phosphorylation" evidence=IEA] [GO:0016301 "kinase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 InterPro:IPR000719 InterPro:IPR008271
InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 PROSITE:PS50237 SMART:SM00119 UniPathway:UPA00143
dictyBase:DDB_G0276527 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005524 eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674
GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 EMBL:AAFI02000015 SUPFAM:SSF56204 HSSP:Q9H0M0
RefSeq:XP_643080.1 ProteinModelPortal:Q8SSY6
EnsemblProtists:DDB0219986 GeneID:8620484 KEGG:ddi:DDB_G0276527
InParanoid:Q8SSY6 OMA:IITIIVE Uniprot:Q8SSY6
Length = 1887
Score = 224 (83.9 bits), Expect = 7.0e-13, Sum P(2) = 7.0e-13
Identities = 94/373 (25%), Positives = 171/373 (45%)
Query: 253 PKLLE---SAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVE 309
PKL+E + L V +I+ G KH+ +T G+V+ WG +LG S L +
Sbjct: 231 PKLVEFFQTKPSLRVVSIANGGKHSLALTICGKVYSWGGNDSCQLGLGNGSSSSYYSLPQ 290
Query: 310 CLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGV 369
++ N+ S + + T +NN+ D G ++ S L + + +
Sbjct: 291 LIN-FNI-SYNNNN------NNNNNNSTNNNNNNNND--GAQQQFS--LSQNSSSNNNKI 338
Query: 370 RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHG--NLQNVSQPKEVESLRGLKVKSVA 427
++ K++CG +A+++ G LFT+G G G LG G +L S PK V+SL+G + ++
Sbjct: 339 KIVKLSCGTNRSAVITDKGLLFTFGRGDHGRLGLGEQSLLMQSTPKLVQSLQGHFIIDMS 398
Query: 428 CGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG-HVDGERKLLPTCVT------- 479
G H+ + + K G +F++G D+G+LG ++ +P +
Sbjct: 399 SGGGHSLVLTN------K-----GLVFSFGRNDQGQLGIGCFSNQQTIPKQIQWFQTSQQ 447
Query: 480 -RLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNP--KAKDRSITVV--EGKLK 534
+ + ++ S G ++ ++ Y G + +G LG DR++ V+ +
Sbjct: 448 QQQQPINIIKVSAGGYHSIAISDNNDTYAWGRSDYGVLGTSIDVQGDRNLPVLINSNSVV 507
Query: 535 EEFVK--GISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPT--FVEALRDRQV 590
+ VK +SSG H ++ GS+Y+WG NA +LG + + TP F+ + +D +
Sbjct: 508 VDNVKFIDVSSGFQHNVAMSIDGSLYSWGCNAGQRLGFKSDENQLTPKKCFINS-KDSKP 566
Query: 591 ESVVCGSSITAAI 603
CG IT +
Sbjct: 567 LLFTCGEIITIIV 579
Score = 154 (59.3 bits), Expect = 1.7e-14, Sum P(3) = 1.7e-14
Identities = 38/119 (31%), Positives = 66/119 (55%)
Query: 370 RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLR---GLKVKSV 426
++ ++ G H++ ++ G L+T+GDG G LGHGNL++ S PK VE + L+V S+
Sbjct: 189 KIVLISTGAIHSSFITDQGNLYTFGDGLLGKLGHGNLESYSSPKLVEFFQTKPSLRVVSI 248
Query: 427 ACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFD 485
A G H+ A+ I GK+++WG D +LG +G + + +L++F+
Sbjct: 249 ANGGKHSLALT-----------ICGKVYSWGGNDSCQLGLGNGSSSSYYS-LPQLINFN 295
Score = 143 (55.4 bits), Expect = 2.4e-13, Sum P(3) = 2.4e-13
Identities = 35/98 (35%), Positives = 56/98 (57%)
Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS---GINVQSVSCGE 323
IS GA H++ +T +G ++ +G+G G+LGH S PKLVE + V S++ G
Sbjct: 193 ISTGAIHSSFITDQGNLYTFGDGLLGKLGHGNLESYSSPKLVEFFQTKPSLRVVSIANGG 252
Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHW-LPR 360
+ ALT G++Y+WG N+ +G S S++ LP+
Sbjct: 253 KHSLALTICGKVYSWGGNDSCQLGLGNGSSSSYYSLPQ 290
Score = 138 (53.6 bits), Expect = 1.7e-14, Sum P(3) = 1.7e-14
Identities = 38/132 (28%), Positives = 67/132 (50%)
Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAVHGQLG--NPKAKDRSITVVEGKLKEEFVKGISSG 544
V+ SCG + +T G ++T G HG+LG +S + L+ F+ +SSG
Sbjct: 341 VKLSCGTNRSAVITDKGLLFTFGRGDHGRLGLGEQSLLMQSTPKLVQSLQGHFIIDMSSG 400
Query: 545 SYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGSSITAAI 603
H VLT+ G V+++G+N GQLG+G ++T P ++ + Q + + I +
Sbjct: 401 GGHSLVLTNKGLVFSFGRNDQGQLGIGCFSNQQTIPKQIQWFQTSQQQQQQPINIIKVSA 460
Query: 604 CLHKSISVGDQS 615
+ SI++ D +
Sbjct: 461 GGYHSIAISDNN 472
Score = 96 (38.9 bits), Expect = 1.4e-08, Sum P(3) = 1.4e-08
Identities = 30/122 (24%), Positives = 55/122 (45%)
Query: 286 WGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGA 345
WG G + + N ++S E + + +S G + +T G +YT+G G
Sbjct: 164 WGNG----IRNYKNCNMSSIGFSEMYNQQKIVLISTGAIHSSFITDQGNLYTFGDGLLGK 219
Query: 346 DLVGERRSRSHWLPR--KLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGH 403
+G S+ P+ + F T +RV +A G H+ ++ G+++++G LG
Sbjct: 220 --LGHGNLESYSSPKLVEFFQTKPSLRVVSIANGGKHSLALTICGKVYSWGGNDSCQLGL 277
Query: 404 GN 405
GN
Sbjct: 278 GN 279
Score = 44 (20.5 bits), Expect = 1.7e-14, Sum P(3) = 1.7e-14
Identities = 14/74 (18%), Positives = 33/74 (44%)
Query: 769 PIPKTQMSTHSPLLRKISLGSNFIPIASTVEKDLSESNKMLNEEVQRLRDQARNLE-KQC 827
P+ S+ + + +N + + K+ ES ++ EE+Q + + + K
Sbjct: 895 PLTTATASSTTATATATTTTANTTNSSGIINKNFGESLRLSMEEIQLIVLETQKYAIKYH 954
Query: 828 QIGNQKVQECQQKI 841
+ +Q++Q+C I
Sbjct: 955 SLLSQQLQQCDDLI 968
Score = 43 (20.2 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 8/41 (19%), Positives = 22/41 (53%)
Query: 553 SGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESV 593
SGG++ W +N N ++ +R P ++ + + ++++
Sbjct: 1232 SGGNLLDWCRNNNND---NENNKRRQPWEIQKIFQQIIQAI 1269
Score = 41 (19.5 bits), Expect = 3.3e-14, Sum P(3) = 3.3e-14
Identities = 11/23 (47%), Positives = 16/23 (69%)
Query: 1005 EENQVVVY--QKYGIEEYSNLNQ 1025
EE Q++V QKY I+ +S L+Q
Sbjct: 937 EEIQLIVLETQKYAIKYHSLLSQ 959
>POMBASE|SPBC557.03c [details] [associations]
symbol:pim1 "Ran GDP/GTP exchange factor" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005087 "Ran guanyl-nucleotide exchange factor
activity" evidence=IGI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006406 "mRNA export from nucleus" evidence=IMP] [GO:0006407
"rRNA export from nucleus" evidence=ISO] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IMP] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IC] [GO:0007346 "regulation of
mitotic cell cycle" evidence=IMP] [GO:0030071 "regulation of
mitotic metaphase/anaphase transition" evidence=IMP] [GO:0031291
"Ran protein signal transduction" evidence=IGI] [GO:0032888
"regulation of mitotic spindle elongation" evidence=IMP]
[GO:0042992 "negative regulation of transcription factor import
into nucleus" evidence=IMP] [GO:0060623 "regulation of chromosome
condensation" evidence=IGI] [GO:1901673 "regulation of spindle
assembly involved in mitosis" evidence=IMP] PomBase:SPBC557.03c
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0051301 GO:GO:0030071
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0000790
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0006406
GO:GO:0090307 GO:GO:0005087 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0007093 eggNOG:COG5184
GO:GO:0060623 GO:GO:0042992 GO:GO:0006407 GO:GO:0031291 EMBL:M73528
PIR:B40039 PIR:T50368 RefSeq:NP_596026.1 ProteinModelPortal:P28745
STRING:P28745 EnsemblFungi:SPBC557.03c.1 GeneID:2541059
KEGG:spo:SPBC557.03c HOGENOM:HOG000170207 OMA:KGIVYAW
OrthoDB:EOG466ZVF NextBio:20802173 Uniprot:P28745
Length = 539
Score = 218 (81.8 bits), Expect = 2.9e-14, P = 2.9e-14
Identities = 87/298 (29%), Positives = 129/298 (43%)
Query: 330 TKSGEIYTWGHNNHGADLVGERRSRSHWLPR--KLFDTLDGVRVSKVACGEWHTAIVSTS 387
T+ +Y +G + +GE + PR + T D V V +A G H+A +S
Sbjct: 68 TERLNVYVFGSGSMNELGMGEEEMDVVYRPRLNPILST-DKVGVVDLAVGGMHSAALSHD 126
Query: 388 GQLFTYG---DGTFGVLG------HGN-LQN---VSQPKEVE-SLRGLKVKSVACGPWHT 433
G+++T+G D G L +G+ + N P +VE +L L+V V C T
Sbjct: 127 GRVYTWGVNDDYALGRLTKDQKDENGDKVDNDLLEGTPSKVEGALSHLRVTKVICSDNLT 186
Query: 434 AAIVDIMVDRCKSNAIGGKLFTWGD--ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASC 491
AAI D G FTWG G LG+ D +++ RL + Q +
Sbjct: 187 AAITD-----------NGCCFTWGTFRCSDGVLGYSDSQKRTAEPTQMRLPEI--CQLAT 233
Query: 492 GRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSIT-VVEGKLKEEFVKGISSGSYHVAV 550
G + LT GKVYT G+ QLG + R + + L + + + +GSYH
Sbjct: 234 GTDHIIALTTTGKVYTWGNGQQFQLGRRMLERRRLQGLTPQPLALKNIISVGAGSYHSFA 293
Query: 551 LTSGGSVYTWGKNANGQLGLGDSQERE-----TPTFVEALRDRQVESVVCGSSITAAI 603
+ + G VY WG N Q G+ E E PT V+AL V+S+ G T A+
Sbjct: 294 IDNKGRVYAWGLNITRQCGIEVEDEEEGAVITKPTLVDALEGYNVKSITGGEHHTLAL 351
Score = 182 (69.1 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 85/324 (26%), Positives = 139/324 (42%)
Query: 295 GHKVNMDV--SCPKLVE-CLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER 351
G KV+ D+ P VE LS + V V C + T A+T +G +TWG ++G
Sbjct: 152 GDKVDNDLLEGTPSKVEGALSHLRVTKVICSDNLTAAITDNGCCFTWGTFRCSDGVLGYS 211
Query: 352 RSRSHWL-PRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVS 410
S+ P ++ L + ++A G H ++T+G+++T+G+G LG L+
Sbjct: 212 DSQKRTAEPTQM--RLP--EICQLATGTDHIIALTTTGKVYTWGNGQQFQLGRRMLERRR 267
Query: 411 -QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDG 469
Q + L + SV G +H+ AI D K L +G
Sbjct: 268 LQGLTPQPLALKNIISVGAGSYHSFAI-----DN-KGRVYAWGLNITRQCGIEVEDEEEG 321
Query: 470 ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSI--T 527
PT V L ++ + G T+ L G+V G QLG P D ++ T
Sbjct: 322 AVITKPTLVDALEGYNVKSITGGEHHTLALLEDGRVLAWGRDDRHQLGIP---DNALPET 378
Query: 528 VVEGKLKEEF-------VKGISS------GSYHVAVLTSGGSVYTWGKNANGQLGLGDSQ 574
VV+ + + + G+++ G++H +TS G VY+WG N ++G GD+
Sbjct: 379 VVKDEKGNNYYLSTPTIIPGLTNVIQVVCGTHHNLAVTSDGKVYSWGSAENYEVGQGDND 438
Query: 575 ER-ETPTFVEALRDRQVESVVCGS 597
E PT V + ++V V G+
Sbjct: 439 EDVAVPTLVRSKAIKEVAIRVAGA 462
Score = 176 (67.0 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 80/310 (25%), Positives = 136/310 (43%)
Query: 234 GGAVDGSVSQNKTQVDALL-PKL--LESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
G + + ++D + P+L + S + V ++++G H+A ++ +G V+ WG
Sbjct: 77 GSGSMNELGMGEEEMDVVYRPRLNPILSTDKVGVVDLAVGGMHSAALSHDGRVYTWGVND 136
Query: 291 D---GRL--------GHKVNMDV--SCPKLVE-CLSGINVQSVSCGEFQTCALTKSGEIY 336
D GRL G KV+ D+ P VE LS + V V C + T A+T +G +
Sbjct: 137 DYALGRLTKDQKDENGDKVDNDLLEGTPSKVEGALSHLRVTKVICSDNLTAAITDNGCCF 196
Query: 337 TWGHNNHGADLVGERRSRSHWL-PRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGD 395
TWG ++G S+ P ++ L + ++A G H ++T+G+++T+G+
Sbjct: 197 TWGTFRCSDGVLGYSDSQKRTAEPTQM--RLP--EICQLATGTDHIIALTTTGKVYTWGN 252
Query: 396 GTFGVLGHGNLQNVS-QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLF 454
G LG L+ Q + L + SV G +H+ AI N G+++
Sbjct: 253 GQQFQLGRRMLERRRLQGLTPQPLALKNIISVGAGSYHSFAI---------DNK--GRVY 301
Query: 455 TWGDADKGRLG-HVDGERK----LLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMG 509
WG + G V+ E + PT V L ++ + G T+ L G+V G
Sbjct: 302 AWGLNITRQCGIEVEDEEEGAVITKPTLVDALEGYNVKSITGGEHHTLALLEDGRVLAWG 361
Query: 510 SAVHGQLGNP 519
QLG P
Sbjct: 362 RDDRHQLGIP 371
Score = 167 (63.8 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 54/227 (23%), Positives = 99/227 (43%)
Query: 263 DVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLV-ECLSGINVQSVSC 321
++ ++ G H +T G+V+ WG G+ +LG ++ L + L+ N+ SV
Sbjct: 227 EICQLATGTDHIIALTTTGKVYTWGNGQQFQLGRRMLERRRLQGLTPQPLALKNIISVGA 286
Query: 322 GEFQTCALTKSGEIYTWGHN---NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGE 378
G + + A+ G +Y WG N G ++ E P L D L+G V + GE
Sbjct: 287 GSYHSFAIDNKGRVYAWGLNITRQCGIEVEDEEEGAVITKPT-LVDALEGYNVKSITGGE 345
Query: 379 WHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRG----LKVKSVACGPWHTA 434
HT + G++ +G LG + N V+ +G L ++ G
Sbjct: 346 HHTLALLEDGRVLAWGRDDRHQLGIPD--NALPETVVKDEKGNNYYLSTPTIIPG---LT 400
Query: 435 AIVDIMVDRCKSNAI--GGKLFTWGDADKGRLGHVDGERKL-LPTCV 478
++ ++ + A+ GK+++WG A+ +G D + + +PT V
Sbjct: 401 NVIQVVCGTHHNLAVTSDGKVYSWGSAENYEVGQGDNDEDVAVPTLV 447
Score = 159 (61.0 bits), Expect = 7.8e-08, P = 7.8e-08
Identities = 49/200 (24%), Positives = 97/200 (48%)
Query: 245 KTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMD--- 301
+ ++ L P+ L + ++ ++ G+ H+ + +G V+ WG + G +V +
Sbjct: 265 RRRLQGLTPQPL---ALKNIISVGAGSYHSFAIDNKGRVYAWGLNITRQCGIEVEDEEEG 321
Query: 302 --VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN-HGADL---------VG 349
++ P LV+ L G NV+S++ GE T AL + G + WG ++ H + V
Sbjct: 322 AVITKPTLVDALEGYNVKSITGGEHHTLALLEDGRVLAWGRDDRHQLGIPDNALPETVVK 381
Query: 350 ERRSRSHWLPRKLFDTLDGV-RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHG-NLQ 407
+ + +++L + G+ V +V CG H V++ G+++++G +G G N +
Sbjct: 382 DEKGNNYYLSTPTI--IPGLTNVIQVVCGTHHNLAVTSDGKVYSWGSAENYEVGQGDNDE 439
Query: 408 NVSQPKEVESLRGLKVKSVA 427
+V+ P V R +K VA
Sbjct: 440 DVAVPTLV---RSKAIKEVA 456
>UNIPROTKB|F1MD33 [details] [associations]
symbol:F1MD33 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042462 "eye photoreceptor cell development"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0005929 "cilium" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104160 EMBL:DAAA02073693
IPI:IPI00698306 Ensembl:ENSBTAT00000005090 OMA:SAEKHET
Uniprot:F1MD33
Length = 158
Score = 194 (73.4 bits), Expect = 4.4e-14, P = 4.4e-14
Identities = 51/158 (32%), Positives = 83/158 (52%)
Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGIN-VQSVSCGEFQTCALTKSGEIYTWG 339
G+V+ G +G+LG + S L+ + + ++ +S G + ALT GE+YT+G
Sbjct: 3 GQVYATGGNNEGQLGLGDTDERSAFHLISFFTSQHKIKQLSAGSNTSAALTAEGELYTFG 62
Query: 340 HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
G + + +H +P+ + + +V +VACG HT +V T ++T+G G FG
Sbjct: 63 EPESGKLGLPPKLLVNHKVPQLVPGISE--KVIQVACGGGHT-VVLTEKAVYTFGLGQFG 119
Query: 400 VLGHGNLQ-NVSQPKEVESLRGLKVKSVACGPWHTAAI 436
LG G S+PK +ES++ K+ V CG HTA I
Sbjct: 120 QLGLGTFTFETSEPKVIESVKDKKISHVCCGENHTALI 157
Score = 174 (66.3 bits), Expect = 6.1e-12, P = 6.1e-12
Identities = 50/159 (31%), Positives = 79/159 (49%)
Query: 450 GGKLFTWGDADKGRLGHVD-GERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTM 508
GG+++ G ++G+LG D ER Q S G + LT G++YT
Sbjct: 2 GGQVYATGGNNEGQLGLGDTDERSAFHLISFFTSQHKIKQLSAGSNTSAALTAEGELYTF 61
Query: 509 GSAVHGQLGNPK---AKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
G G+LG P + +V G + E+ ++ ++ G H VLT +VYT+G
Sbjct: 62 GEPESGKLGLPPKLLVNHKVPQLVPG-ISEKVIQ-VACGGGHTVVLTEK-AVYTFGLGQF 118
Query: 566 GQLGLGD-SQERETPTFVEALRDRQVESVVCGSSITAAI 603
GQLGLG + E P +E+++D+++ V CG + TA I
Sbjct: 119 GQLGLGTFTFETSEPKVIESVKDKKISHVCCGENHTALI 157
Score = 147 (56.8 bits), Expect = 4.6e-09, P = 4.6e-09
Identities = 45/161 (27%), Positives = 82/161 (50%)
Query: 230 GGDI---GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCW 286
GG + GG +G + T + + ++ +S G+ +A +T EGE++ +
Sbjct: 2 GGQVYATGGNNEGQLGLGDTDERSAFHLISFFTSQHKIKQLSAGSNTSAALTAEGELYTF 61
Query: 287 GEGKDGRLG--HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHG 344
GE + G+LG K+ ++ P+LV +S +Q V+CG T LT+ +YT+G G
Sbjct: 62 GEPESGKLGLPPKLLVNHKVPQLVPGISEKVIQ-VACGGGHTVVLTEKA-VYTFGLGQFG 119
Query: 345 ADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVS 385
+G + P K+ +++ ++S V CGE HTA+++
Sbjct: 120 QLGLGTFTFETSE-P-KVIESVKDKKISHVCCGENHTALIT 158
Score = 121 (47.7 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 32/106 (30%), Positives = 53/106 (50%)
Query: 501 GLGKVYTMGSAVHGQLGNPKAKDRS-ITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYT 559
G G+VY G GQLG +RS ++ + +K +S+GS A LT+ G +YT
Sbjct: 1 GGGQVYATGGNNEGQLGLGDTDERSAFHLISFFTSQHKIKQLSAGSNTSAALTAEGELYT 60
Query: 560 WGKNANGQLGLGDSQ--ERETPTFVEALRDRQVESVVCGSSITAAI 603
+G+ +G+LGL + P V + ++ ++ V CG T +
Sbjct: 61 FGEPESGKLGLPPKLLVNHKVPQLVPGISEKVIQ-VACGGGHTVVL 105
>ZFIN|ZDB-GENE-080929-1 [details] [associations]
symbol:als2b "amyotrophic lateral sclerosis 2b
(juvenile)" species:7955 "Danio rerio" [GO:0035023 "regulation of
Rho protein signal transduction" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005089 "Rho guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0005543 "phospholipid
binding" evidence=IEA] InterPro:IPR000219 InterPro:IPR001849
Pfam:PF00621 PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408
Pfam:PF00415 Pfam:PF02204 ZFIN:ZDB-GENE-080929-1 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0005622 GO:GO:0005089
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023 InterPro:IPR003409
InterPro:IPR003123 Pfam:PF02493 SMART:SM00698 PROSITE:PS51205
GeneTree:ENSGT00600000084242 KO:K04575 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 EMBL:CU570787 EMBL:BX927225
EMBL:CU915284 IPI:IPI01024580 RefSeq:XP_002662342.2
UniGene:Dr.158633 Ensembl:ENSDART00000149896 GeneID:100318899
KEGG:dre:100318899 CTD:100318899 Uniprot:F8W4K3
Length = 1681
Score = 180 (68.4 bits), Expect = 7.6e-14, Sum P(3) = 7.6e-14
Identities = 55/180 (30%), Positives = 89/180 (49%)
Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVEC-LSGINVQSVSCG 322
V +LGA+H L+ + G+V+ +GE L K N S ++E LS V V+ G
Sbjct: 40 VLQAALGARHGVLLVEGGQVYSFGE-----LPWKQNQTSSAEPILEAVLSEQRVVFVAAG 94
Query: 323 EFQTCALTKSGEIYTWGHNNHG-ADLVGERRSRSHWLPRKLFDTL----DGVRVSKVACG 377
+ +T+ G ++ WG N HG L+G + P + D+ V++ +VACG
Sbjct: 95 SAHSGVVTEDGGVHMWGENVHGQCGLLGLSVIPNP-TPVGVLDSEATPPQTVKILEVACG 153
Query: 378 EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
+ HT +S +++ +G G L V +P++V+ L G V VACG H+ A+V
Sbjct: 154 DQHTLALSAKHEVWAWGSGCQLGLNTSTFP-VWKPQKVDHLSGRHVLQVACGSAHSVALV 212
Score = 152 (58.6 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 37/112 (33%), Positives = 61/112 (54%)
Query: 274 AALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSG 333
A L + + EV+ WG+G+DG+LGH + P V+ L+G V V+ G + ALT
Sbjct: 542 AHLPSLQTEVWSWGQGQDGQLGHGDLLPRLQPDCVKSLNGKEVLKVAAGAHHSLALTAQS 601
Query: 334 EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVS 385
++++WG N G +G S + + P+ L DG+RV + G HT +++
Sbjct: 602 QVFSWGCNTSGQ--LGHMESPTTF-PQ-LTKLSDGIRVWDIGAGLQHTLLLA 649
Score = 144 (55.7 bits), Expect = 4.5e-10, Sum P(3) = 4.5e-10
Identities = 50/163 (30%), Positives = 78/163 (47%)
Query: 234 GGAVD--GSVSQNKTQVDALLPKLLESAVMLD--VQNISLGAKHAALVTKEGEVFCWGEG 289
GG V G + + Q + P +LE AV+ + V ++ G+ H+ +VT++G V WGE
Sbjct: 56 GGQVYSFGELPWKQNQTSSAEP-ILE-AVLSEQRVVFVAAGSAHSGVVTEDGGVHMWGEN 113
Query: 290 KDGRLGHKVNMDVSCPKLVECLSG-------INVQSVSCGEFQTCALTKSGEIYTWGHNN 342
G+ G + P V L + + V+CG+ T AL+ E++ WG
Sbjct: 114 VHGQCGLLGLSVIPNPTPVGVLDSEATPPQTVKILEVACGDQHTLALSAKHEVWAWGS-- 171
Query: 343 HGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT-AIV 384
G L + W P+K+ D L G V +VACG H+ A+V
Sbjct: 172 -GCQLGLNTSTFPVWKPQKV-DHLSGRHVLQVACGSAHSVALV 212
Score = 111 (44.1 bits), Expect = 7.2e-06, Sum P(3) = 7.2e-06
Identities = 30/105 (28%), Positives = 49/105 (46%)
Query: 334 EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
E+++WG G G+ R L +L+G V KVA G H+ ++ Q+F++
Sbjct: 550 EVWSWGQGQDGQLGHGDLLPR---LQPDCVKSLNGKEVLKVAAGAHHSLALTAQSQVFSW 606
Query: 394 GDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVD 438
G T G LGH + P+ + G++V + G HT + D
Sbjct: 607 GCNTSGQLGHME-SPTTFPQLTKLSDGIRVWDIGAGLQHTLLLAD 650
Score = 110 (43.8 bits), Expect = 7.6e-14, Sum P(3) = 7.6e-14
Identities = 29/107 (27%), Positives = 52/107 (48%)
Query: 452 KLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
++++WG G+LGH D +L P CV L + ++ + G ++ LT +V++ G
Sbjct: 550 EVWSWGQGQDGQLGHGDLLPRLQPDCVKSLNGKEVLKVAAGAHHSLALTAQSQVFSWGCN 609
Query: 512 VHGQLGNPKAKDRSITVVEGKLKEEF-VKGISSGSYHVAVLTSGGSV 557
GQLG+ ++ + KL + V I +G H +L G +
Sbjct: 610 TSGQLGHMESPTTFPQLT--KLSDGIRVWDIGAGLQHTLLLADGDCI 654
Score = 110 (43.8 bits), Expect = 4.5e-10, Sum P(3) = 4.5e-10
Identities = 33/99 (33%), Positives = 52/99 (52%)
Query: 385 STSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRC 444
S +++++G G G LGHG+L QP V+SL G +V VA G H+ A+
Sbjct: 546 SLQTEVWSWGQGQDGQLGHGDLLPRLQPDCVKSLNGKEVLKVAAGAHHSLALT------A 599
Query: 445 KSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVD 483
+S ++F+WG G+LGH++ P +T+L D
Sbjct: 600 QS-----QVFSWGCNTSGQLGHMESPTTF-PQ-LTKLSD 631
Score = 102 (41.0 bits), Expect = 7.2e-06, Sum P(3) = 7.2e-06
Identities = 34/112 (30%), Positives = 54/112 (48%)
Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
V +WGE V G G + SV N T V L + + + ++ G +H ++ +
Sbjct: 107 VHMWGENVHGQC--GLLGLSVIPNPTPVGVLDSEATPPQTV-KILEVACGDQHTLALSAK 163
Query: 281 GEVFCWGEGKDGRLGHKVN-MDVSCPKLVECLSGINVQSVSCGEFQTCALTK 331
EV+ WG G +LG + V P+ V+ LSG +V V+CG + AL +
Sbjct: 164 HEVWAWGSGC--QLGLNTSTFPVWKPQKVDHLSGRHVLQVACGSAHSVALVR 213
Score = 99 (39.9 bits), Expect = 1.0e-12, Sum P(3) = 1.0e-12
Identities = 23/70 (32%), Positives = 41/70 (58%)
Query: 504 KVYTMGSAVHGQLGN----PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYT 559
+V++ G GQLG+ P+ + + + GK E +K +++G++H LT+ V++
Sbjct: 550 EVWSWGQGQDGQLGHGDLLPRLQPDCVKSLNGK---EVLK-VAAGAHHSLALTAQSQVFS 605
Query: 560 WGKNANGQLG 569
WG N +GQLG
Sbjct: 606 WGCNTSGQLG 615
Score = 87 (35.7 bits), Expect = 8.7e-13, Sum P(2) = 8.7e-13
Identities = 21/70 (30%), Positives = 35/70 (50%)
Query: 540 GISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSI 599
GI H+ L + V++WG+ +GQLG GD R P V++L ++V V G+
Sbjct: 536 GIPETDAHLPSLQT--EVWSWGQGQDGQLGHGDLLPRLQPDCVKSLNGKEVLKVAAGAHH 593
Query: 600 TAAICLHKSI 609
+ A+ +
Sbjct: 594 SLALTAQSQV 603
Score = 37 (18.1 bits), Expect = 7.6e-14, Sum P(3) = 7.6e-14
Identities = 6/22 (27%), Positives = 13/22 (59%)
Query: 574 QERETPTFVEALRDRQVESVVC 595
Q+R++P + + +ES+ C
Sbjct: 1360 QQRDSPELLSRSHHKTLESLEC 1381
>FB|FBgn0031769 [details] [associations]
symbol:CG9135 species:7227 "Drosophila melanogaster"
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
[GO:0005875 "microtubule associated complex" evidence=IDA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005875 EMBL:AE014134
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GeneTree:ENSGT00700000104160 OMA:FGENKLG EMBL:AY058682
EMBL:AM294309 EMBL:AM294310 EMBL:AM294311 EMBL:AM294312
EMBL:AM294313 EMBL:AM294314 EMBL:AM294315 EMBL:AM294316
EMBL:AM294317 EMBL:AM294318 EMBL:FM245376 EMBL:FM245377
EMBL:FM245378 EMBL:FM245379 EMBL:FM245380 EMBL:FM245381
EMBL:FM245382 EMBL:FM245383 EMBL:FM245384 EMBL:FM245385
EMBL:FM245386 EMBL:FM245387 RefSeq:NP_608985.1 RefSeq:NP_723150.1
UniGene:Dm.4234 HSSP:P18754 SMR:Q9VMI5 IntAct:Q9VMI5
MINT:MINT-744911 STRING:Q9VMI5 EnsemblMetazoa:FBtr0079185
EnsemblMetazoa:FBtr0079186 GeneID:33850 KEGG:dme:Dmel_CG9135
UCSC:CG9135-RA FlyBase:FBgn0031769 InParanoid:Q9VMI5
OrthoDB:EOG4QV9T7 ChiTaRS:CG9135 GenomeRNAi:33850 NextBio:785598
Uniprot:Q9VMI5
Length = 487
Score = 213 (80.0 bits), Expect = 8.2e-14, P = 8.2e-14
Identities = 88/352 (25%), Positives = 151/352 (42%)
Query: 271 AKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVS-CPKLVECLSGINVQSVSCGEFQTCAL 329
A H L+ + + +G G+LG ++ ++ P ++ L +N+ + G T L
Sbjct: 125 AAHTILINMDRKALGFGRNPSGQLGLSQDIKLAEKPTIIPALEQLNIVQAAVGRHHTLFL 184
Query: 330 TKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQ 389
T +G +Y G N G VG + + P + G + ++ CG + I+ G
Sbjct: 185 TDTGTVYACGENKSGQCGVGNTHANIY-SPTPI--NYRGPPIIRIGCGAEFSVILDIKGS 241
Query: 390 LFTYGDGTFGVLGHG-------NLQNVS-----QPKEVESLRGLKVKSVACGPWHTAAIV 437
L T+G +G LGH N +S PK+V L K K P IV
Sbjct: 242 LHTFGLPEYGQLGHNTDAKYFVNANKLSFHFETSPKKVV-LYIEKSKEGHVTPVDGVQIV 300
Query: 438 DIMVDRCKSNAIGGK--LFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRML 495
D + AI K +++WG GRLGH + + +++P RL+ F Q GR +
Sbjct: 301 DFACGNNHTVAIDSKKRVYSWGFGGFGRLGHAEPKDEMVP----RLMKFFDTQGRGGRSV 356
Query: 496 TVGLTGLGKVYTMGSA-VHGQLGNPKAKDRSITVVEGK-LKEEFVKGISSGSYHVAVLTS 553
G T V +G + GQ N K + ++ + L + I + + ++++
Sbjct: 357 FCGSTFSLIVNELGLLFLFGQ--NKKTGEANMYPKPVQDLSGWNITDIGCANTSI-MISA 413
Query: 554 GGSVYTWGKNAN-GQLGLGDSQERET-PTFVEALRDRQVESVVCGSSITAAI 603
++ WG + G+LG+G+ Q+ T P V L + ++ V G S T +
Sbjct: 414 DDTLIAWGASPTFGELGIGEFQKSSTVPKEVPKLDNIKIPQVTMGYSHTVLL 465
Score = 184 (69.8 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 54/182 (29%), Positives = 85/182 (46%)
Query: 262 LDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS--GINVQSV 319
+ + + + G H + + V+ WG G GRLGH D P+L++ G +SV
Sbjct: 297 VQIVDFACGNNHTVAIDSKKRVYSWGFGGFGRLGHAEPKDEMVPRLMKFFDTQGRGGRSV 356
Query: 320 SCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEW 379
CG + + + G ++ +G N GE ++ P+ + D L G ++ + C
Sbjct: 357 FCGSTFSLIVNELGLLFLFGQNKK----TGE----ANMYPKPVQD-LSGWNITDIGCA-- 405
Query: 380 HTAI-VSTSGQLFTYGDG-TFGVLGHGNLQNVSQ-PKEVESLRGLKVKSVACGPWHTAAI 436
+T+I +S L +G TFG LG G Q S PKEV L +K+ V G HT +
Sbjct: 406 NTSIMISADDTLIAWGASPTFGELGIGEFQKSSTVPKEVPKLDNIKIPQVTMGYSHTVLL 465
Query: 437 VD 438
VD
Sbjct: 466 VD 467
Score = 133 (51.9 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 59/192 (30%), Positives = 90/192 (46%)
Query: 386 TSGQLFTYGDGTFGVLGHGNLQNVSQPK-EVESLRGL---KVKSVACGPWHTAAIVDIMV 441
T GQ+ G T+ + G + +NV++ + + S K + VA GP A + I +
Sbjct: 75 TPGQMLIAGMVTWDLTGKRDRKNVTKVRPNLYSFHRFTEEKYRYVASGP-SAAHTILINM 133
Query: 442 DRCKSNAIGGKLFTWGDADKGRLGHVDGERKLL--PTCVTRLVDFDFVQASCGRMLTVGL 499
DR A+G +G G+LG + + KL PT + L + VQA+ GR T+ L
Sbjct: 134 DR---KALG-----FGRNPSGQLG-LSQDIKLAEKPTIIPALEQLNIVQAAVGRHHTLFL 184
Query: 500 TGLGKVYTMGSAVHGQ--LGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSV 557
T G VY G GQ +GN A S T + + ++ I G+ +L GS+
Sbjct: 185 TDTGTVYACGENKSGQCGVGNTHANIYSPTPINYR-GPPIIR-IGCGAEFSVILDIKGSL 242
Query: 558 YTWGKNANGQLG 569
+T+G GQLG
Sbjct: 243 HTFGLPEYGQLG 254
>RGD|1307558 [details] [associations]
symbol:Wbscr16 "Williams-Beuren syndrome chromosome region 16"
species:10116 "Rattus norvegicus" [GO:0005739 "mitochondrion"
evidence=IEA;ISO] RGD:1307558 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
EMBL:CH473973 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104312 CTD:81554 OMA:MVTLAKS
OrthoDB:EOG4F1X33 IPI:IPI00189798 RefSeq:NP_001101802.1
UniGene:Rn.40552 Ensembl:ENSRNOT00000002032 GeneID:360796
KEGG:rno:360796 UCSC:RGD:1307558 NextBio:674123 Uniprot:D4AE90
Length = 461
Score = 210 (79.0 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 90/334 (26%), Positives = 148/334 (44%)
Query: 290 KDGRLGHKVNMDVS-CPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGA--- 345
KD G++ ++ S P ++ V VSCG + LT +++ G+N HG
Sbjct: 146 KDKTRGYEYVLEPSPVPLPLDRPQETKVLQVSCGRAHSLVLTDREGVFSMGNNAHGQCGR 205
Query: 346 DLV-GERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHG 404
+V E S SH + R +G +V +V CG+ H+ ++ G++++ G G G G G
Sbjct: 206 KVVEDEVYSESHKVHR--MQDFEG-QVVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGLG 262
Query: 405 NLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGR 463
+ S P ++ L G+ V VA T D C + + G +F WG+++ +
Sbjct: 263 HYNITSTPSKLGGDLAGVTVVQVA-----TYG------DCCLALSADGGVFGWGNSEYLQ 311
Query: 464 LGHV-DGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAK 522
L V D + +P C+ Q +CG L G V+ G + G+ P
Sbjct: 312 LASVTDSTQVNVPRCLPFSGVGKVKQVACGGTGCAILNEEGHVFVWGYGILGK--GPNLS 369
Query: 523 DRSIT-VVEGKL--KEEF-----VKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQ 574
+ ++ ++ L EF V I G H A LT+ G ++ WGKN G LG+G +
Sbjct: 370 ETALPEMIPPTLFGLTEFNPEVKVSQIRCGLSHFAALTNKGELFVWGKNIRGCLGIGRLE 429
Query: 575 ERETPTFVEALRDRQVESVVCGSSITAAICLHKS 608
++ P V + V+ V CG + + L KS
Sbjct: 430 DQYFPWRV-TMPGEPVD-VACG--VDHMVTLAKS 459
Score = 200 (75.5 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 78/248 (31%), Positives = 119/248 (47%)
Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGR--LGHKVNMDVSCPKLVECLSGINVQSVSC 321
V + G H+ +T +GEV+ G G DG+ LGH N+ + KL L+G+ V V+
Sbjct: 229 VVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGLGH-YNITSTPSKLGGDLAGVTVVQVAT 287
Query: 322 GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGV-RVSKVACGEWH 380
AL+ G ++ WG++ + L S +PR L GV +V +VACG
Sbjct: 288 YGDCCLALSADGGVFGWGNSEY-LQLASVTDSTQVNVPRCL--PFSGVGKVKQVACGGTG 344
Query: 381 TAIVSTSGQLFTYGDGTFGVLGHG-NLQNVSQPKEVE-SLRGL-------KVKSVACGPW 431
AI++ G +F +G +G+LG G NL + P+ + +L GL KV + CG
Sbjct: 345 CAILNEEGHVFVWG---YGILGKGPNLSETALPEMIPPTLFGLTEFNPEVKVSQIRCGLS 401
Query: 432 HTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASC 491
H AA+ + K G+LF WG +G LG E + P VT + + V +C
Sbjct: 402 HFAALTN------K-----GELFVWGKNIRGCLGIGRLEDQYFPWRVT--MPGEPVDVAC 448
Query: 492 G--RMLTV 497
G M+T+
Sbjct: 449 GVDHMVTL 456
Score = 172 (65.6 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 89/337 (26%), Positives = 141/337 (41%)
Query: 207 YGSPLIERKDILKDVM-IWGEGV-LGGDIG---GAVDGSVSQNKTQVDALLPKLLESAVM 261
YG L+ K KDV +WG G+ +G D + + +P L+
Sbjct: 113 YGFTLLSSKT--KDVTKVWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVPLPLDRPQE 170
Query: 262 LDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDV---SCPKL--VECLSGINV 316
V +S G H+ ++T VF G G+ G KV D K+ ++ G V
Sbjct: 171 TKVLQVSCGRAHSLVLTDREGVFSMGNNAHGQCGRKVVEDEVYSESHKVHRMQDFEGQVV 230
Query: 317 QSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC 376
Q V CG+ + LT GE+Y+ G G +G S P KL L GV V +VA
Sbjct: 231 QVV-CGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITS--TPSKLGGDLAGVTVVQVAT 287
Query: 377 -GEWHTAIVSTSGQLFTYGDGTFGVLGH-GNLQNVSQPKEVESLRGL-KVKSVACGPWHT 433
G+ A+ S G +F +G+ + L + V+ P+ + G+ KVK VACG
Sbjct: 288 YGDCCLAL-SADGGVFGWGNSEYLQLASVTDSTQVNVPRCLP-FSGVGKVKQVACGGTGC 345
Query: 434 AAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGER--KLLPTCVTRLVDFD----FV 487
A + + G +F WG G+ ++ +++P + L +F+
Sbjct: 346 AILNE-----------EGHVFVWGYGILGKGPNLSETALPEMIPPTLFGLTEFNPEVKVS 394
Query: 488 QASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDR 524
Q CG LT G+++ G + G LG + +D+
Sbjct: 395 QIRCGLSHFAALTNKGELFVWGKNIRGCLGIGRLEDQ 431
Score = 143 (55.4 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 44/152 (28%), Positives = 75/152 (49%)
Query: 244 NKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVS 303
+ TQV+ +P+ L + + V+ ++ G A++ +EG VF WG G G+ G ++ + +
Sbjct: 317 DSTQVN--VPRCLPFSGVGKVKQVACGGTGCAILNEEGHVFVWGYGILGK-GPNLS-ETA 372
Query: 304 CPKLVE-CLSG-------INVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRS 355
P+++ L G + V + CG ALT GE++ WG N G +G R
Sbjct: 373 LPEMIPPTLFGLTEFNPEVKVSQIRCGLSHFAALTNKGELFVWGKNIRGC--LGIGRLED 430
Query: 356 HWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
+ P ++ T+ G V VACG H ++ S
Sbjct: 431 QYFPWRV--TMPGEPVD-VACGVDHMVTLAKS 459
>TAIR|locus:2035423 [details] [associations]
symbol:AT1G19880 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002684
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 OMA:FGENKLG
IPI:IPI00543359 RefSeq:NP_173417.2 UniGene:At.16200
ProteinModelPortal:F4HQZ1 SMR:F4HQZ1 PRIDE:F4HQZ1
EnsemblPlants:AT1G19880.1 GeneID:838576 KEGG:ath:AT1G19880
Uniprot:F4HQZ1
Length = 538
Score = 216 (81.1 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 60/194 (30%), Positives = 87/194 (44%)
Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
PK + S + ++ G H V K G V+ WG G GRLGH+ D P+ ++
Sbjct: 226 PKAIASLAGETIVKVACGTNHTVAVDKNGYVYTWGFGGYGRLGHREQKDEWAPRRIDVFQ 285
Query: 313 GINVQS----VSCGEFQTCALTKSGEIYTWGH-NNHGADLVGERRSRSHWL-PRKLFDTL 366
NV +S G + G++Y WG N+G D W+ P+ + D L
Sbjct: 286 RNNVLPPNAILSAGSANSACTAGGGQLYMWGKIKNNGDD----------WMYPKPMMD-L 334
Query: 367 DGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHG-NLQNVSQ-PKEVESLRGLKVK 424
G + + G H V ++G +G LG+G N Q S PK+V+ L G+ V
Sbjct: 335 SGWNLRWMDSGSMHH-FVGADSSCISWGHAQYGELGYGPNGQKSSAAPKKVDMLEGMHVM 393
Query: 425 SVACGPWHTAAIVD 438
VACG H+ IVD
Sbjct: 394 GVACGFCHSMVIVD 407
Score = 197 (74.4 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 93/389 (23%), Positives = 162/389 (41%)
Query: 227 GVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAK--HAALVTKEGEVF 284
G DI G G++ N P L V ++++ ++ G H + EG +
Sbjct: 26 GATAWDIIGKRKGAMEGNLVS-----PTRLRPLVGVNIRFVATGCASFHCVALDVEGRCY 80
Query: 285 CWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHG 344
WG + G+LGH + P +V LS + + G T ++ G+ +G N +G
Sbjct: 81 TWGRNEKGQLGHGDMIQRDRPTVVSGLSKHKIVKAAAGRNHTVVVSDDGQSLGFGWNKYG 140
Query: 345 ADLVGERRSRSHWLPRKLFDT-LDGV---RVSKVACGEWHTA-IVSTSG-QLFTYGDGTF 398
+G +++ ++ ++ T L V V+ VACG T + ST G + T G +
Sbjct: 141 Q--LGLGSAKNGFVSVEVESTPLPCVVSDEVTNVACGADFTVWLSSTEGASILTAGLPQY 198
Query: 399 GVLGHG-----NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKL 453
G LGHG N+++ S E+ + K++A T V + + G +
Sbjct: 199 GQLGHGTDNEFNMKDSSVRLAYEAQP--RPKAIASLAGETIVKVACGTNHTVAVDKNGYV 256
Query: 454 FTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQA----SCGRMLTVGLTGLGKVYTMG 509
+TWG GRLGH + + + P + + + S G + G G++Y G
Sbjct: 257 YTWGFGGYGRLGHREQKDEWAPRRIDVFQRNNVLPPNAILSAGSANSACTAGGGQLYMWG 316
Query: 510 SAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLG 569
+ G+ + + + G ++ + SGS H V + S +WG G+LG
Sbjct: 317 KIKNN--GDDWMYPKPMMDLSGWN----LRWMDSGSMHHFV-GADSSCISWGHAQYGELG 369
Query: 570 LGDSQERET--PTFVEALRDRQVESVVCG 596
G + ++ + P V+ L V V CG
Sbjct: 370 YGPNGQKSSAAPKKVDMLEGMHVMGVACG 398
Score = 185 (70.2 bits), Expect = 5.0e-10, Sum P(2) = 5.0e-10
Identities = 78/285 (27%), Positives = 120/285 (42%)
Query: 331 KSGEIYTWGHNNHGADLVGERRSRSHW---LPRKLFDTLDGVRVSKVA--CGEWHTAIVS 385
K GE+ G D++G+R+ P +L L GV + VA C +H +
Sbjct: 18 KGGELLFCGAT--AWDIIGKRKGAMEGNLVSPTRL-RPLVGVNIRFVATGCASFHCVALD 74
Query: 386 TSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCK 445
G+ +T+G G LGHG++ +P V L K+ A G HT + D D +
Sbjct: 75 VEGRCYTWGRNEKGQLGHGDMIQRDRPTVVSGLSKHKIVKAAAGRNHTVVVSD---DG-Q 130
Query: 446 SNAIG----GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTG 501
S G G+L G A G + V+ E LP CV V + +CG TV L+
Sbjct: 131 SLGFGWNKYGQLGL-GSAKNGFVS-VEVESTPLP-CV---VSDEVTNVACGADFTVWLSS 184
Query: 502 L--GKVYTMGSAVHGQLGNP-----KAKDRSITVV-EGK--------LKEEFVKGISSGS 545
+ T G +GQLG+ KD S+ + E + L E + ++ G+
Sbjct: 185 TEGASILTAGLPQYGQLGHGTDNEFNMKDSSVRLAYEAQPRPKAIASLAGETIVKVACGT 244
Query: 546 YHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQV 590
H + G VYTWG G+LG + ++ P ++ + V
Sbjct: 245 NHTVAVDKNGYVYTWGFGGYGRLGHREQKDEWAPRRIDVFQRNNV 289
Score = 143 (55.4 bits), Expect = 5.0e-07, Sum P(2) = 5.0e-07
Identities = 54/175 (30%), Positives = 79/175 (45%)
Query: 450 GGKLFTWG----DADKGRLGHVDGERKLLPTCVTRLVDFD--FVQASCGRMLTVGLTGLG 503
GG+L G D R G ++G + PT + LV + FV C V L G
Sbjct: 19 GGELLFCGATAWDIIGKRKGAMEGNL-VSPTRLRPLVGVNIRFVATGCASFHCVALDVEG 77
Query: 504 KVYTMGSAVHGQLGNPKA--KDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWG 561
+ YT G GQLG+ +DR TVV G K + VK ++G H V++ G +G
Sbjct: 78 RCYTWGRNEKGQLGHGDMIQRDRP-TVVSGLSKHKIVKA-AAGRNHTVVVSDDGQSLGFG 135
Query: 562 KNANGQLGLGDSQERETPTFVEA-----LRDRQVESVVCGSSITAAICLHKSISV 611
N GQLGLG ++ VE+ + +V +V CG+ T + + S+
Sbjct: 136 WNKYGQLGLGSAKNGFVSVEVESTPLPCVVSDEVTNVACGADFTVWLSSTEGASI 190
Score = 57 (25.1 bits), Expect = 5.0e-07, Sum P(2) = 5.0e-07
Identities = 18/60 (30%), Positives = 30/60 (50%)
Query: 735 ESASSLSSGLQRWGQVSCPIRFKTHCHEKSV----EPTPIPKTQMSTHSPLLRKISLGSN 790
E AS L++GL ++GQ+ + + + SV E P PK S + K++ G+N
Sbjct: 186 EGASILTAGLPQYGQLGHGTDNEFNMKDSSVRLAYEAQPRPKAIASLAGETIVKVACGTN 245
Score = 42 (19.8 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 696 QGSLSEEVKEEKGALTPSRGQSFTSKQSRNVERK 729
+GSL E V+E K + Q+ T K+ + +RK
Sbjct: 424 KGSLEESVEEVKEETLAPKQQAVT-KRGASKKRK 456
>UNIPROTKB|F1P3N0 [details] [associations]
symbol:WBSCR16 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005739 "mitochondrion" evidence=IEA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104312 OMA:MVTLAKS EMBL:AADN02026016
EMBL:AADN02026017 IPI:IPI00579944 Ensembl:ENSGALT00000001779
Uniprot:F1P3N0
Length = 454
Score = 208 (78.3 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 108/420 (25%), Positives = 175/420 (41%)
Query: 207 YGSPLIERKDILKDVMIWG---EGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLD 263
Y ++RKD V +WG G LG + V K + P LE+
Sbjct: 47 YVGKAVKRKD---RVFVWGFSYSGALG--VPSFVKPDAGWKKPRRIQATPYRLETEEK-- 99
Query: 264 VQNISLGAKHAALVTKEGEVF-CWGEG--KDGRLG-----------HKVNMDVS-CPKLV 308
+ + + G L + ++ WG G KD +LG ++ ++ S P +
Sbjct: 100 ITSAACGYGFTLLSSNTTDITKVWGMGLNKDSQLGFQRSIRDRTKGYEYVLEPSPIPLPL 159
Query: 309 ECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGA---DLV-GERRSRSHWLPRKLFD 364
E V VSCG + LT S ++T G+N++G +V E S SH L +L D
Sbjct: 160 EKPQKTRVLQVSCGRAHSLVLTDSEGVFTMGNNSYGQCGRKVVEDEIYSESH-LIHQLND 218
Query: 365 TLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVES-LRGLKV 423
D RV +V CG+ H+ + G +F G G G G G+ S P ++ + G+ +
Sbjct: 219 -FDS-RVVQVVCGQDHSLFRTKKGAVFACGWGADGQTGLGHYNITSVPTKLGGDIAGVNI 276
Query: 424 KSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL-LPTCVTRLV 482
V+ D C + + G LF WG+++ +L V ++ +P + +
Sbjct: 277 VQVSS-----------YGDCCLAVSDEGDLFGWGNSEYLQLASVTETTQVNVPRHLPFKI 325
Query: 483 DFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN------PKAKDRSITVVEGKLKEE 536
+A+CG + LT G V+ G + G+ N P+ S+ +
Sbjct: 326 G-KIKEAACGGTGNIVLTEEGAVFVWGYGILGKGPNLTETAVPEMIPPSLFGWSDFSSDV 384
Query: 537 FVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCG 596
V + G H A LT+ G ++ WGKN G LG+G +++ P V +V V CG
Sbjct: 385 RVARVRCGLSHFAALTNRGELFVWGKNLRGCLGIGRMEDQYFPWRVTI--PGEVVDVACG 442
>DICTYBASE|DDB_G0284187 [details] [associations]
symbol:Dd5P2 "inositol 5-phosphatase" species:44689
"Dictyostelium discoideum" [GO:0046856 "phosphatidylinositol
dephosphorylation" evidence=IDA] [GO:0046855 "inositol phosphate
dephosphorylation" evidence=IDA] [GO:0034485
"phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity"
evidence=IDA] [GO:0004445 "inositol-polyphosphate 5-phosphatase
activity" evidence=IDA] [GO:0004439
"phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity"
evidence=IDA] [GO:0046854 "phosphatidylinositol phosphorylation"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR000300 SMART:SM00128 dictyBase:DDB_G0284187
INTERPRO:IPR000408 Pfam:PF00415 GenomeReviews:CM000153_GR
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR005135
SUPFAM:SSF56219 EMBL:AAFI02000064 GO:GO:0046854 GO:GO:0046855
GO:GO:0004439 GO:GO:0046856 GO:GO:0004445 eggNOG:COG5411
GO:GO:0034485 RefSeq:XP_638694.1 ProteinModelPortal:Q54PV1
EnsemblProtists:DDB0191414 GeneID:8624525 KEGG:ddi:DDB_G0284187
InParanoid:Q54PV1 OMA:SHEKMER Uniprot:Q54PV1
Length = 1800
Score = 214 (80.4 bits), Expect = 5.7e-12, Sum P(2) = 5.7e-12
Identities = 95/365 (26%), Positives = 154/365 (42%)
Query: 239 GSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKV 298
G +D P + L++ +S+G H+A + E WGE +G K
Sbjct: 10 GKTGNTCHNIDKKYPSPPSVLISLNLDQLSMGPNHSAAIVNN-ECLMWGEV----MGRKH 64
Query: 299 NMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWL 358
L + + V SVSCG T LT +I++ G N G +G +
Sbjct: 65 TT------LFKIVWKRRVVSVSCGFNHTLLLTSEYKIFSMGFNQTGQ--LGIENVVDSAV 116
Query: 359 PRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQ---------NV 409
P + DTL V K+ G +A ++ +G L+ +G +G LG+G + +
Sbjct: 117 PLPV-DTLSKFNVIKIKAGNNVSAAITEAGDLYCWGSSAYGQLGNGKMNAKLHSFTPTTI 175
Query: 410 SQP------KEVESLRGLKVKSVACGPWHTAAIVDI-MVDRCKSNAIG--------GKLF 454
P K+ + L+ ++ G HT AI + SN G KL
Sbjct: 176 LNPLIPDAEKDDPIYQNLQYTNICFGAQHTIAISTTGAIFSWGSNQYGQLGLGHCNAKLV 235
Query: 455 T----WGDADKGRLGHVDGERKLLPTCVT-RLVDFDFVQASCGRMLTVGLTGLGKVYTMG 509
++ + R GH++ +++ T T + + V +CG + LT G ++ G
Sbjct: 236 PVPIHLDNSFERRAGHINSLGEIVTTDFTAKTIHRIVVDIACGNFHSALLTLEGDLFLWG 295
Query: 510 SAVHGQLGNPKAKDRSIT-VVEGKLKEEFVK--GISSGSYHVAVLTSGGSVYTWGKNANG 566
S +GQLG + D+S+ V+G L EFVK ++ G+ H +LT V+T+G N
Sbjct: 296 SNQYGQLGQGDSLDQSVPKTVKGSL--EFVKINRMALGNNHTILLTKEQDVFTFGSNEFY 353
Query: 567 QLGLG 571
QLG G
Sbjct: 354 QLGHG 358
Score = 164 (62.8 bits), Expect = 7.0e-13, Sum P(3) = 7.0e-13
Identities = 64/250 (25%), Positives = 109/250 (43%)
Query: 283 VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN 342
++ WG+GK G H N+D P L +N+ +S G + A+ + E WG
Sbjct: 4 LYTWGKGKTGNTCH--NIDKKYPSPPSVLISLNLDQLSMGPNHSAAIVNN-ECLMWG--- 57
Query: 343 HGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLG 402
+++G R H LF + RV V+CG HT ++++ ++F+ G G LG
Sbjct: 58 ---EVMG----RKH---TTLFKIVWKRRVVSVSCGFNHTLLLTSEYKIFSMGFNQTGQLG 107
Query: 403 HGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKG 462
N+ + + P V++L V + G +AAI + G L+ WG + G
Sbjct: 108 IENVVDSAVPLPVDTLSKFNVIKIKAGNNVSAAITE-----------AGDLYCWGSSAYG 156
Query: 463 RLGHVDGERKL---LPTCVTR-LV-----------DFDFVQASCGRMLTVGLTGLGKVYT 507
+LG+ KL PT + L+ + + G T+ ++ G +++
Sbjct: 157 QLGNGKMNAKLHSFTPTTILNPLIPDAEKDDPIYQNLQYTNICFGAQHTIAISTTGAIFS 216
Query: 508 MGSAVHGQLG 517
GS +GQLG
Sbjct: 217 WGSNQYGQLG 226
Score = 158 (60.7 bits), Expect = 1.3e-09, Sum P(3) = 1.3e-09
Identities = 32/126 (25%), Positives = 67/126 (53%)
Query: 316 VQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVA 375
V ++CG F + LT G+++ WG N +G +G+ S +P+ + +L+ V+++++A
Sbjct: 272 VVDIACGNFHSALLTLEGDLFLWGSNQYGQ--LGQGDSLDQSVPKTVKGSLEFVKINRMA 329
Query: 376 CGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQ---PKEVESLRGLKVKSVACGPWH 432
G HT +++ +FT+G F LGHG++ ++ P +++ + + A G
Sbjct: 330 LGNNHTILLTKEQDVFTFGSNEFYQLGHGSIGGKNRLYFPTQIQKPKVMASDIFAAGDCS 389
Query: 433 TAAIVD 438
++D
Sbjct: 390 AYFVLD 395
Score = 150 (57.9 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 41/143 (28%), Positives = 69/143 (48%)
Query: 452 KLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
K+F+ G G+LG + +P V L F+ ++ G ++ +T G +Y GS+
Sbjct: 94 KIFSMGFNQTGQLGIENVVDSAVPLPVDTLSKFNVIKIKAGNNVSAAITEAGDLYCWGSS 153
Query: 512 VHGQLGNPK--AKDRSIT-------VVEGKLKEEFV------KGISSGSYHVAVLTSGGS 556
+GQLGN K AK S T ++ K++ + I G+ H +++ G+
Sbjct: 154 AYGQLGNGKMNAKLHSFTPTTILNPLIPDAEKDDPIYQNLQYTNICFGAQHTIAISTTGA 213
Query: 557 VYTWGKNANGQLGLGDSQERETP 579
+++WG N GQLGLG + P
Sbjct: 214 IFSWGSNQYGQLGLGHCNAKLVP 236
Score = 129 (50.5 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 36/114 (31%), Positives = 60/114 (52%)
Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVE-SLRGLKVKSVACG 429
V +ACG +H+A+++ G LF +G +G LG G+ + S PK V+ SL +K+ +A G
Sbjct: 272 VVDIACGNFHSALLTLEGDLFLWGSNQYGQLGQGDSLDQSVPKTVKGSLEFVKINRMALG 331
Query: 430 PWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGH--VDGERKL-LPTCVTR 480
HT + K + FT+G + +LGH + G+ +L PT + +
Sbjct: 332 NNHTILLT-------KEQDV----FTFGSNEFYQLGHGSIGGKNRLYFPTQIQK 374
Score = 110 (43.8 bits), Expect = 7.0e-13, Sum P(3) = 7.0e-13
Identities = 24/79 (30%), Positives = 42/79 (53%)
Query: 532 KLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVE-ALRDRQV 590
K V I+ G++H A+LT G ++ WG N GQLG GDS ++ P V+ +L ++
Sbjct: 266 KTIHRIVVDIACGNFHSALLTLEGDLFLWGSNQYGQLGQGDSLDQSVPKTVKGSLEFVKI 325
Query: 591 ESVVCGSSITAAICLHKSI 609
+ G++ T + + +
Sbjct: 326 NRMALGNNHTILLTKEQDV 344
Score = 84 (34.6 bits), Expect = 1.3e-09, Sum P(3) = 1.3e-09
Identities = 22/81 (27%), Positives = 39/81 (48%)
Query: 220 DVMIWGEGVLGGDIGGAVDGSV-SQNKTQV-DALLPKL-LESAVMLDVQ--NISLGAKHA 274
D+ WG G G ++ + S T + + L+P + + ++Q NI GA+H
Sbjct: 146 DLYCWGSSAYGQLGNGKMNAKLHSFTPTTILNPLIPDAEKDDPIYQNLQYTNICFGAQHT 205
Query: 275 ALVTKEGEVFCWGEGKDGRLG 295
++ G +F WG + G+LG
Sbjct: 206 IAISTTGAIFSWGSNQYGQLG 226
Score = 45 (20.9 bits), Expect = 7.0e-13, Sum P(3) = 7.0e-13
Identities = 26/120 (21%), Positives = 42/120 (35%)
Query: 615 SSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINASLT--PNKGKPSRVCDTCYNHL 672
S S +P G K N G+ F + +N+ L P+ K R Y +
Sbjct: 552 SEVSGAVVPCGMMGKIGNKGGLGVRFTLYKTGICFVNSHLAAGPSHEKMERRTQD-YKKI 610
Query: 673 QKITHSGRLLKQENQSPRNLLNLQGSLSEEVKEEKGALTPSRGQSFTSKQSRNVERKPGE 732
Q +T L +++ +L + E K + Q + N ERK G+
Sbjct: 611 QMMTFENHLSMLDHECLIWFGDLNYRIDLPYSETKALIEQKNWQKLQAHDQLNNERKAGK 670
Score = 38 (18.4 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 15/63 (23%), Positives = 26/63 (41%)
Query: 572 DSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKH 631
+ E + F+++ D V C S T L+ S+GD +C +P F + +
Sbjct: 1211 EEDEEDDEDFIDSESDSDVGGY-CSSMPT----LN---SLGDSGACHLEDLPLNFLKNRE 1262
Query: 632 NCY 634
Y
Sbjct: 1263 INY 1265
>TAIR|locus:2014345 [details] [associations]
symbol:BRX-LIKE3 "AT1G54180" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
EMBL:AC005287 EMBL:AC006577 HOGENOM:HOG000240563 InterPro:IPR013591
Pfam:PF08381 PROSITE:PS51514 EMBL:BT020396 EMBL:BT020515
EMBL:AY735539 EMBL:AY924710 IPI:IPI00534377 IPI:IPI00929932
PIR:A96583 RefSeq:NP_001154422.1 RefSeq:NP_175820.2
UniGene:At.66930 EnsemblPlants:AT1G54180.1 GeneID:841858
KEGG:ath:AT1G54180 TAIR:At1g54180 eggNOG:NOG258623
InParanoid:Q5HZ09 OMA:KFSEMHA Genevestigator:Q5HZ09 Uniprot:Q5HZ09
Length = 370
Score = 189 (71.6 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 48/131 (36%), Positives = 70/131 (53%)
Query: 887 DANLPPKLDTDKHPEVKLPKDRKVDSLCSSPIVFSNKLKSVYGRELCHDNSSGSVEDSKV 946
D+ + P L+ ++ P +P S+P KL S+ G + + GS S V
Sbjct: 249 DSPVTPPLERER-PHRNIPGS---SGFASTP-----KLSSISGTKTETSSIDGSARSSSV 299
Query: 947 ARTEPQQKGTKASKLE--YAEQYEPGIYITFTTLPSGQKGLKRVRFSRRRFTEKAAERWW 1004
R+E + + AS +E + EQ EPGIYIT LP G + L+RVRFSR +F E A WW
Sbjct: 300 DRSE-EVSVSNASDMESEWVEQDEPGIYITIRALPDGNRELRRVRFSRDKFGETHARLWW 358
Query: 1005 EENQVVVYQKY 1015
E+N+ + Q+Y
Sbjct: 359 EQNRARIQQQY 369
Score = 102 (41.0 bits), Expect = 0.00034, Sum P(3) = 0.00034
Identities = 28/88 (31%), Positives = 42/88 (47%)
Query: 908 RKVDSLCSSPIVFSNKLKSVYGRELCHDNSSGSVEDSKVARTEPQQKGTKASKLEYAEQY 967
++ + S+P ++ N+++S L +S S RTE E+ Q
Sbjct: 91 QRAGTATSTPKIWGNEMES----RLKGISSEEGTPTSMSGRTESIVFMEDDEVKEWVAQV 146
Query: 968 EPGIYITFTTLPSGQKGLKRVRFSRRRF 995
EPG+ ITF +LP G LKR+RF RF
Sbjct: 147 EPGVLITFVSLPQGGNDLKRIRFRSTRF 174
Score = 54 (24.1 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 18/53 (33%), Positives = 28/53 (52%)
Query: 513 HGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
HG +G P+ K ++I + +LK+ VK +SG+Y SG T +N N
Sbjct: 26 HGVIGTPRTK-QAIKSLTSQLKDMAVK--ASGAYKNCKPCSG----TTNRNQN 71
Score = 54 (24.1 bits), Expect = 0.00034, Sum P(3) = 0.00034
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 992 RRRFTEKAAERWWEENQVVVYQKYGIE 1018
R F + A++WW EN V + Y ++
Sbjct: 197 REMFNKWQAQKWWVENFEKVMELYNVQ 223
>GENEDB_PFALCIPARUM|PFE0420c [details] [associations]
symbol:PFE0420c "guanidine nucleotide exchange
factor, putative" species:5833 "Plasmodium falciparum" [GO:0006323
"DNA packaging" evidence=ISS] [GO:0020011 "apicoplast"
evidence=RCA] INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0006323 EMBL:AL844504
GenomeReviews:AL844504_GR RefSeq:XP_001351643.1
ProteinModelPortal:Q8I418 EnsemblProtists:PFE0420c:mRNA
GeneID:812857 KEGG:pfa:PFE0420c EuPathDB:PlasmoDB:PF3D7_0508500
HOGENOM:HOG000284105 ProtClustDB:CLSZ2446497 Uniprot:Q8I418
Length = 2606
Score = 150 (57.9 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 57/198 (28%), Positives = 88/198 (44%)
Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
D+ WG G G +G + S NK Q L+ L ++ + G H+ +
Sbjct: 459 DIYSWGYGG-NGRLG--LGNIKSYNKPQ---LIKGLRNKRILY----VCAGTSHSGCIDS 508
Query: 280 EGEVFCWGEGKDGRLGH-KVNMDVSCPKLVECLS-GINVQSVSCGEFQTCALTKSGEIYT 337
V+ WG GK +LGH ++D+ PKLVECL+ V +S G F + AL G++Y
Sbjct: 509 NYNVYTWGNGKFYKLGHGNDDIDIYYPKLVECLNHNKKVCMLSFGCFNSLALNVKGDVYV 568
Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
WG N + V S+ LP+++ +T C H + G + GD
Sbjct: 569 WGTFNITNNYVNYYISK---LPKQI-NT-------NYKCISIHASTYVCFG-ITLVGD-- 614
Query: 398 FGVLGHGNLQNVSQPKEV 415
++ GN +N S KE+
Sbjct: 615 --LISFGNYKNYSYEKEI 630
Score = 122 (48.0 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 38/161 (23%), Positives = 77/161 (47%)
Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
V + S G+KH+ G+++ WG G +GRLG + P+L++ L + V G
Sbjct: 441 VIHCSAGSKHSLACNLHGDIYSWGYGGNGRLGLGNIKSYNKPQLIKGLRNKRILYVCAGT 500
Query: 324 FQTCALTKSGEIYTWGHNN-----HGADLVGERRSRSHWLPRKLFDTLD-GVRVSKVACG 377
+ + + +YTWG+ HG D + + P KL + L+ +V ++ G
Sbjct: 501 SHSGCIDSNYNVYTWGNGKFYKLGHGNDDI------DIYYP-KLVECLNHNKKVCMLSFG 553
Query: 378 EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQ-PKEVES 417
+++ ++ G ++ +G TF + + +S+ PK++ +
Sbjct: 554 CFNSLALNVKGDVYVWG--TFNITNNYVNYYISKLPKQINT 592
Score = 118 (46.6 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 37/121 (30%), Positives = 62/121 (51%)
Query: 496 TVGLTGLGKVYTMGSAVHGQLGNPK---AKDRSITVVEGKLKEEFVKGISSGSYHVAVLT 552
+V L GKVYT G +G+LGN + K + ++ + +K I+ G +V ++
Sbjct: 764 SVFLLESGKVYTAGYNKNGELGNGEFNLKKKFGVPILLNICVNKIIK-IACGYNYVLCVS 822
Query: 553 SGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVG 612
G VY WGKN QLG+G ++ P V+ L + V ++ G +A I ++K + G
Sbjct: 823 DVGLVYGWGKNDKSQLGIGVIKDFYEPVHVKNLTN--VINIFAGYDHSACI-INKLLDKG 879
Query: 613 D 613
+
Sbjct: 880 N 880
Score = 116 (45.9 bits), Expect = 4.3e-08, Sum P(3) = 4.3e-08
Identities = 33/122 (27%), Positives = 66/122 (54%)
Query: 329 LTKSGEIYTWGHNNHGADLVGERRSRSHW-LPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
L +SG++YT G+N +G GE + + +P L ++ ++ K+ACG + VS
Sbjct: 767 LLESGKVYTAGYNKNGELGNGEFNLKKKFGVPILLNICVN--KIIKIACGYNYVLCVSDV 824
Query: 388 GQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSN 447
G ++ +G LG G +++ +P V++L V ++ G H+A I++ ++D+ +N
Sbjct: 825 GLVYGWGKNDKSQLGIGVIKDFYEPVHVKNLTN--VINIFAGYDHSACIINKLLDKGNTN 882
Query: 448 AI 449
+
Sbjct: 883 GV 884
Score = 115 (45.5 bits), Expect = 5.5e-08, Sum P(3) = 5.5e-08
Identities = 23/70 (32%), Positives = 38/70 (54%)
Query: 534 KEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESV 593
K+ V S+GS H G +Y+WG NG+LGLG+ + P ++ LR++++ V
Sbjct: 437 KKNVVIHCSAGSKHSLACNLHGDIYSWGYGGNGRLGLGNIKSYNKPQLIKGLRNKRILYV 496
Query: 594 VCGSSITAAI 603
G+S + I
Sbjct: 497 CAGTSHSGCI 506
Score = 111 (44.1 bits), Expect = 2.7e-08, Sum P(3) = 2.7e-08
Identities = 20/71 (28%), Positives = 37/71 (52%)
Query: 348 VGERRSRSHWL---PRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHG 404
+ E ++ W P K+ ++ ++CG+ HT + T G L+++G FG +G+G
Sbjct: 325 IKENDNKHDWFTPFPMKIVFPKKNTKIKFISCGDMHTLAICTGGVLYSWGYNNFGCIGNG 384
Query: 405 NLQNVSQPKEV 415
QNV +P +
Sbjct: 385 TNQNVYEPTPI 395
Score = 106 (42.4 bits), Expect = 3.2e-11, Sum P(3) = 3.2e-11
Identities = 46/178 (25%), Positives = 79/178 (44%)
Query: 339 GHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVA--C--GEWHTAIVSTSGQLFTYG 394
G NN D + + S + K D++ + V C G H+ + G ++++G
Sbjct: 406 GDNNDD-DYDDDNNNNSTYKFHKKEDSIKWDKKKNVVIHCSAGSKHSLACNLHGDIYSWG 464
Query: 395 DGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLF 454
G G LG GN+++ ++P+ ++ LR ++ V G H+ I D SN ++
Sbjct: 465 YGGNGRLGLGNIKSYNKPQLIKGLRNKRILYVCAGTSHSGCI-D-------SNY---NVY 513
Query: 455 TWGDADKGRLGHVDGERKLL-PTCVTRLVDFDFV-QASCGRMLTVGLTGLGKVYTMGS 510
TWG+ +LGH + + + P V L V S G ++ L G VY G+
Sbjct: 514 TWGNGKFYKLGHGNDDIDIYYPKLVECLNHNKKVCMLSFGCFNSLALNVKGDVYVWGT 571
Score = 103 (41.3 bits), Expect = 7.4e-11, Sum P(2) = 7.4e-11
Identities = 37/135 (27%), Positives = 69/135 (51%)
Query: 451 GKLFTWGDADKGRLG-HVDGERK--LLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYT 507
G L+ WG+A+ G++G VD + LLP + +++ + S G ++ LT ++Y
Sbjct: 905 GDLYIWGNAESGKVGLGVDYTQGCILLPRKIN-IIN-KIYKCSLGNSHSLFLTNTNELYV 962
Query: 508 MGSAVHGQLGN-PKAKDR-SITVVEGKL---KEEFVKGISSGSYHVAVLTSGGSVYTWGK 562
GS +G+LG K+K +I V K+ ++K I +G+ + +L+ G +Y +G+
Sbjct: 963 CGSNNNGRLGLFEKSKMVCNIVSVPTKVILHNNIYIKDILAGNTYSIILSVDGFIYIFGE 1022
Query: 563 NANGQLGLGDSQERE 577
G G ++ E
Sbjct: 1023 FIKGSNGNSNNMSCE 1037
Score = 93 (37.8 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 17/58 (29%), Positives = 32/58 (55%)
Query: 306 KLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLF 363
K+V ++ +SCG+ T A+ G +Y+WG+NN G +G +++ + P +F
Sbjct: 341 KIVFPKKNTKIKFISCGDMHTLAICTGGVLYSWGYNNFGC--IGNGTNQNVYEPTPIF 396
Score = 92 (37.4 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 28/102 (27%), Positives = 51/102 (50%)
Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAVHGQLG--NPKAKDRSITVVEGKLKEEFVKGISSG 544
+ S G ++ G +Y+ G +G+LG N K+ ++ +++G L+ + + + +G
Sbjct: 442 IHCSAGSKHSLACNLHGDIYSWGYGGNGRLGLGNIKSYNKP-QLIKG-LRNKRILYVCAG 499
Query: 545 SYHVAVLTSGGSVYTWGKNANGQLGLG-DSQERETPTFVEAL 585
+ H + S +VYTWG +LG G D + P VE L
Sbjct: 500 TSHSGCIDSNYNVYTWGNGKFYKLGHGNDDIDIYYPKLVECL 541
Score = 85 (35.0 bits), Expect = 3.2e-11, Sum P(3) = 3.2e-11
Identities = 31/106 (29%), Positives = 46/106 (43%)
Query: 267 ISLGAKHAALVT---KEGEVFCWGEGKDGRLGHKVNMD-VSCPKLVECLSGINVQSVSCG 322
IS G H A V + +F WG +LG +N V+ P +V V S+ C
Sbjct: 22 ISTGLDHYACVAYYKNKPSIFTWGGNSCNQLGLGINNRFVNNPTVVCFFDSFIVASICCT 81
Query: 323 EFQTCALTKSG------EIYTWGHNNHGADLVGERRSRSHWLPRKL 362
+ T L K +Y++G N+G L+G ++ R LP L
Sbjct: 82 NYATFVLVKKNVNDIGCSVYSFGKGNNG--LLGYKKKRE--LPNFL 123
Score = 81 (33.6 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 28/77 (36%), Positives = 39/77 (50%)
Query: 497 VGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAV-LTSGG 555
V L YT + ++G GN K++ V++ K+K I GS H +V L G
Sbjct: 721 VTLNNNDNYYTYDN-INGSHGNIFEKNK--LVLKSKVK------IIDGSDHFSVFLLESG 771
Query: 556 SVYTWGKNANGQLGLGD 572
VYT G N NG+LG G+
Sbjct: 772 KVYTAGYNKNGELGNGE 788
Score = 74 (31.1 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 28/98 (28%), Positives = 45/98 (45%)
Query: 373 KVACGEWHTAIVS---TSGQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVAC 428
K++ G H A V+ +FT+G + LG G N + V+ P V V S+ C
Sbjct: 21 KISTGLDHYACVAYYKNKPSIFTWGGNSCNQLGLGINNRFVNNPTVVCFFDSFIVASICC 80
Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGH 466
+ T +V V N IG ++++G + G LG+
Sbjct: 81 TNYATFVLVKKNV-----NDIGCSVYSFGKGNNGLLGY 113
Score = 73 (30.8 bits), Expect = 1.1e-06, Sum P(3) = 1.1e-06
Identities = 25/103 (24%), Positives = 47/103 (45%)
Query: 503 GKVYTMGSAVHGQLGNPKAKDRSITVVEGKLK--EEFVKGISSGSYHVAVLTSGGSVYTW 560
G +Y G+A G++G + ++ K+ + K S G+ H LT+ +Y
Sbjct: 905 GDLYIWGNAESGKVGLGVDYTQGCILLPRKINIINKIYK-CSLGNSHSLFLTNTNELYVC 963
Query: 561 GKNANGQLGLGDSQER-----ETPTFVEALRDRQVESVVCGSS 598
G N NG+LGL + + PT V + ++ ++ G++
Sbjct: 964 GSNNNGRLGLFEKSKMVCNIVSVPTKVILHNNIYIKDILAGNT 1006
Score = 71 (30.1 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 45/197 (22%), Positives = 85/197 (43%)
Query: 388 GQLFTYGDGTFGVLGHG--NLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRC 444
G L+ +G+ G +G G Q + P+++ + K+ + G H+ + +
Sbjct: 905 GDLYIWGNAESGKVGLGVDYTQGCILLPRKINIIN--KIYKCSLGNSHSLFLTN------ 956
Query: 445 KSNAIGGKLFTWGDADKGRLGHVDGERKL-----LPTCVTRLVDFDFVQASCGRMLTVGL 499
+N +L+ G + GRLG + + + +PT V + G ++ L
Sbjct: 957 -TN----ELYVCGSNNNGRLGLFEKSKMVCNIVSVPTKVILHNNIYIKDILAGNTYSIIL 1011
Query: 500 TGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSY-HVAVLTSGGSVY 558
+ G +Y G + G GN + + S V+ + VK ++ G Y HV LT ++
Sbjct: 1012 SVDGFIYIFGEFIKGSNGN--SNNMSCEVISLYNEITNVKYMN-GKYEHVFFLTYDNKLF 1068
Query: 559 TWGKNANGQLGLGDSQE 575
G N N Q+ L D+++
Sbjct: 1069 GIGNNKNCQI-LCDNEK 1084
Score = 65 (27.9 bits), Expect = 4.3e-07, Sum P(3) = 4.3e-07
Identities = 18/58 (31%), Positives = 28/58 (48%)
Query: 419 RGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPT 476
+ K+K ++CG HT AI C GG L++WG + G +G+ + PT
Sbjct: 347 KNTKIKFISCGDMHTLAI-------CT----GGVLYSWGYNNFGCIGNGTNQNVYEPT 393
Score = 61 (26.5 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 23/80 (28%), Positives = 36/80 (45%)
Query: 451 GKLFTWGDADKGRLGHVDGERK-------LLPTCVTRLVDFDFVQASCGRMLTVGLTGLG 503
GK++T G G LG+ + K LL CV +++ + +CG + ++ +G
Sbjct: 771 GKVYTAGYNKNGELGNGEFNLKKKFGVPILLNICVNKII-----KIACGYNYVLCVSDVG 825
Query: 504 KVYTMGSAVHGQLGNPKAKD 523
VY G QLG KD
Sbjct: 826 LVYGWGKNDKSQLGIGVIKD 845
Score = 59 (25.8 bits), Expect = 1.3e-08, Sum P(3) = 1.3e-08
Identities = 16/69 (23%), Positives = 30/69 (43%)
Query: 240 SVSQNKTQVDALLP---KLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGH 296
++ +N + D P K++ ++ IS G H + G ++ WG G +G+
Sbjct: 324 NIKENDNKHDWFTPFPMKIVFPKKNTKIKFISCGDMHTLAICTGGVLYSWGYNNFGCIGN 383
Query: 297 KVNMDVSCP 305
N +V P
Sbjct: 384 GTNQNVYEP 392
Score = 51 (23.0 bits), Expect = 2.7e-08, Sum P(3) = 2.7e-08
Identities = 12/37 (32%), Positives = 21/37 (56%)
Query: 283 VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSV 319
V+ +G+G +G LG+K ++ P +E N+Q V
Sbjct: 100 VYSFGKGNNGLLGYKKKREL--PNFLEHEEKKNIQKV 134
Score = 47 (21.6 bits), Expect = 5.3e-05, Sum P(3) = 5.3e-05
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
SCG M T+ + G +Y+ G G +GN
Sbjct: 355 SCGDMHTLAICTGGVLYSWGYNNFGCIGN 383
>UNIPROTKB|Q8I418 [details] [associations]
symbol:RCC1 "Guanidine nucleotide exchange factor"
species:36329 "Plasmodium falciparum 3D7" [GO:0006323 "DNA
packaging" evidence=ISS] [GO:0020011 "apicoplast" evidence=RCA]
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0006323 EMBL:AL844504
GenomeReviews:AL844504_GR RefSeq:XP_001351643.1
ProteinModelPortal:Q8I418 EnsemblProtists:PFE0420c:mRNA
GeneID:812857 KEGG:pfa:PFE0420c EuPathDB:PlasmoDB:PF3D7_0508500
HOGENOM:HOG000284105 ProtClustDB:CLSZ2446497 Uniprot:Q8I418
Length = 2606
Score = 150 (57.9 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 57/198 (28%), Positives = 88/198 (44%)
Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
D+ WG G G +G + S NK Q L+ L ++ + G H+ +
Sbjct: 459 DIYSWGYGG-NGRLG--LGNIKSYNKPQ---LIKGLRNKRILY----VCAGTSHSGCIDS 508
Query: 280 EGEVFCWGEGKDGRLGH-KVNMDVSCPKLVECLS-GINVQSVSCGEFQTCALTKSGEIYT 337
V+ WG GK +LGH ++D+ PKLVECL+ V +S G F + AL G++Y
Sbjct: 509 NYNVYTWGNGKFYKLGHGNDDIDIYYPKLVECLNHNKKVCMLSFGCFNSLALNVKGDVYV 568
Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
WG N + V S+ LP+++ +T C H + G + GD
Sbjct: 569 WGTFNITNNYVNYYISK---LPKQI-NT-------NYKCISIHASTYVCFG-ITLVGD-- 614
Query: 398 FGVLGHGNLQNVSQPKEV 415
++ GN +N S KE+
Sbjct: 615 --LISFGNYKNYSYEKEI 630
Score = 122 (48.0 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 38/161 (23%), Positives = 77/161 (47%)
Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
V + S G+KH+ G+++ WG G +GRLG + P+L++ L + V G
Sbjct: 441 VIHCSAGSKHSLACNLHGDIYSWGYGGNGRLGLGNIKSYNKPQLIKGLRNKRILYVCAGT 500
Query: 324 FQTCALTKSGEIYTWGHNN-----HGADLVGERRSRSHWLPRKLFDTLD-GVRVSKVACG 377
+ + + +YTWG+ HG D + + P KL + L+ +V ++ G
Sbjct: 501 SHSGCIDSNYNVYTWGNGKFYKLGHGNDDI------DIYYP-KLVECLNHNKKVCMLSFG 553
Query: 378 EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQ-PKEVES 417
+++ ++ G ++ +G TF + + +S+ PK++ +
Sbjct: 554 CFNSLALNVKGDVYVWG--TFNITNNYVNYYISKLPKQINT 592
Score = 118 (46.6 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 37/121 (30%), Positives = 62/121 (51%)
Query: 496 TVGLTGLGKVYTMGSAVHGQLGNPK---AKDRSITVVEGKLKEEFVKGISSGSYHVAVLT 552
+V L GKVYT G +G+LGN + K + ++ + +K I+ G +V ++
Sbjct: 764 SVFLLESGKVYTAGYNKNGELGNGEFNLKKKFGVPILLNICVNKIIK-IACGYNYVLCVS 822
Query: 553 SGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVG 612
G VY WGKN QLG+G ++ P V+ L + V ++ G +A I ++K + G
Sbjct: 823 DVGLVYGWGKNDKSQLGIGVIKDFYEPVHVKNLTN--VINIFAGYDHSACI-INKLLDKG 879
Query: 613 D 613
+
Sbjct: 880 N 880
Score = 116 (45.9 bits), Expect = 4.3e-08, Sum P(3) = 4.3e-08
Identities = 33/122 (27%), Positives = 66/122 (54%)
Query: 329 LTKSGEIYTWGHNNHGADLVGERRSRSHW-LPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
L +SG++YT G+N +G GE + + +P L ++ ++ K+ACG + VS
Sbjct: 767 LLESGKVYTAGYNKNGELGNGEFNLKKKFGVPILLNICVN--KIIKIACGYNYVLCVSDV 824
Query: 388 GQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSN 447
G ++ +G LG G +++ +P V++L V ++ G H+A I++ ++D+ +N
Sbjct: 825 GLVYGWGKNDKSQLGIGVIKDFYEPVHVKNLTN--VINIFAGYDHSACIINKLLDKGNTN 882
Query: 448 AI 449
+
Sbjct: 883 GV 884
Score = 115 (45.5 bits), Expect = 5.5e-08, Sum P(3) = 5.5e-08
Identities = 23/70 (32%), Positives = 38/70 (54%)
Query: 534 KEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESV 593
K+ V S+GS H G +Y+WG NG+LGLG+ + P ++ LR++++ V
Sbjct: 437 KKNVVIHCSAGSKHSLACNLHGDIYSWGYGGNGRLGLGNIKSYNKPQLIKGLRNKRILYV 496
Query: 594 VCGSSITAAI 603
G+S + I
Sbjct: 497 CAGTSHSGCI 506
Score = 111 (44.1 bits), Expect = 2.7e-08, Sum P(3) = 2.7e-08
Identities = 20/71 (28%), Positives = 37/71 (52%)
Query: 348 VGERRSRSHWL---PRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHG 404
+ E ++ W P K+ ++ ++CG+ HT + T G L+++G FG +G+G
Sbjct: 325 IKENDNKHDWFTPFPMKIVFPKKNTKIKFISCGDMHTLAICTGGVLYSWGYNNFGCIGNG 384
Query: 405 NLQNVSQPKEV 415
QNV +P +
Sbjct: 385 TNQNVYEPTPI 395
Score = 106 (42.4 bits), Expect = 3.2e-11, Sum P(3) = 3.2e-11
Identities = 46/178 (25%), Positives = 79/178 (44%)
Query: 339 GHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVA--C--GEWHTAIVSTSGQLFTYG 394
G NN D + + S + K D++ + V C G H+ + G ++++G
Sbjct: 406 GDNNDD-DYDDDNNNNSTYKFHKKEDSIKWDKKKNVVIHCSAGSKHSLACNLHGDIYSWG 464
Query: 395 DGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLF 454
G G LG GN+++ ++P+ ++ LR ++ V G H+ I D SN ++
Sbjct: 465 YGGNGRLGLGNIKSYNKPQLIKGLRNKRILYVCAGTSHSGCI-D-------SNY---NVY 513
Query: 455 TWGDADKGRLGHVDGERKLL-PTCVTRLVDFDFV-QASCGRMLTVGLTGLGKVYTMGS 510
TWG+ +LGH + + + P V L V S G ++ L G VY G+
Sbjct: 514 TWGNGKFYKLGHGNDDIDIYYPKLVECLNHNKKVCMLSFGCFNSLALNVKGDVYVWGT 571
Score = 103 (41.3 bits), Expect = 7.4e-11, Sum P(2) = 7.4e-11
Identities = 37/135 (27%), Positives = 69/135 (51%)
Query: 451 GKLFTWGDADKGRLG-HVDGERK--LLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYT 507
G L+ WG+A+ G++G VD + LLP + +++ + S G ++ LT ++Y
Sbjct: 905 GDLYIWGNAESGKVGLGVDYTQGCILLPRKIN-IIN-KIYKCSLGNSHSLFLTNTNELYV 962
Query: 508 MGSAVHGQLGN-PKAKDR-SITVVEGKL---KEEFVKGISSGSYHVAVLTSGGSVYTWGK 562
GS +G+LG K+K +I V K+ ++K I +G+ + +L+ G +Y +G+
Sbjct: 963 CGSNNNGRLGLFEKSKMVCNIVSVPTKVILHNNIYIKDILAGNTYSIILSVDGFIYIFGE 1022
Query: 563 NANGQLGLGDSQERE 577
G G ++ E
Sbjct: 1023 FIKGSNGNSNNMSCE 1037
Score = 93 (37.8 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 17/58 (29%), Positives = 32/58 (55%)
Query: 306 KLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLF 363
K+V ++ +SCG+ T A+ G +Y+WG+NN G +G +++ + P +F
Sbjct: 341 KIVFPKKNTKIKFISCGDMHTLAICTGGVLYSWGYNNFGC--IGNGTNQNVYEPTPIF 396
Score = 92 (37.4 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 28/102 (27%), Positives = 51/102 (50%)
Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAVHGQLG--NPKAKDRSITVVEGKLKEEFVKGISSG 544
+ S G ++ G +Y+ G +G+LG N K+ ++ +++G L+ + + + +G
Sbjct: 442 IHCSAGSKHSLACNLHGDIYSWGYGGNGRLGLGNIKSYNKP-QLIKG-LRNKRILYVCAG 499
Query: 545 SYHVAVLTSGGSVYTWGKNANGQLGLG-DSQERETPTFVEAL 585
+ H + S +VYTWG +LG G D + P VE L
Sbjct: 500 TSHSGCIDSNYNVYTWGNGKFYKLGHGNDDIDIYYPKLVECL 541
Score = 85 (35.0 bits), Expect = 3.2e-11, Sum P(3) = 3.2e-11
Identities = 31/106 (29%), Positives = 46/106 (43%)
Query: 267 ISLGAKHAALVT---KEGEVFCWGEGKDGRLGHKVNMD-VSCPKLVECLSGINVQSVSCG 322
IS G H A V + +F WG +LG +N V+ P +V V S+ C
Sbjct: 22 ISTGLDHYACVAYYKNKPSIFTWGGNSCNQLGLGINNRFVNNPTVVCFFDSFIVASICCT 81
Query: 323 EFQTCALTKSG------EIYTWGHNNHGADLVGERRSRSHWLPRKL 362
+ T L K +Y++G N+G L+G ++ R LP L
Sbjct: 82 NYATFVLVKKNVNDIGCSVYSFGKGNNG--LLGYKKKRE--LPNFL 123
Score = 81 (33.6 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 28/77 (36%), Positives = 39/77 (50%)
Query: 497 VGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAV-LTSGG 555
V L YT + ++G GN K++ V++ K+K I GS H +V L G
Sbjct: 721 VTLNNNDNYYTYDN-INGSHGNIFEKNK--LVLKSKVK------IIDGSDHFSVFLLESG 771
Query: 556 SVYTWGKNANGQLGLGD 572
VYT G N NG+LG G+
Sbjct: 772 KVYTAGYNKNGELGNGE 788
Score = 74 (31.1 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 28/98 (28%), Positives = 45/98 (45%)
Query: 373 KVACGEWHTAIVS---TSGQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVAC 428
K++ G H A V+ +FT+G + LG G N + V+ P V V S+ C
Sbjct: 21 KISTGLDHYACVAYYKNKPSIFTWGGNSCNQLGLGINNRFVNNPTVVCFFDSFIVASICC 80
Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGH 466
+ T +V V N IG ++++G + G LG+
Sbjct: 81 TNYATFVLVKKNV-----NDIGCSVYSFGKGNNGLLGY 113
Score = 73 (30.8 bits), Expect = 1.1e-06, Sum P(3) = 1.1e-06
Identities = 25/103 (24%), Positives = 47/103 (45%)
Query: 503 GKVYTMGSAVHGQLGNPKAKDRSITVVEGKLK--EEFVKGISSGSYHVAVLTSGGSVYTW 560
G +Y G+A G++G + ++ K+ + K S G+ H LT+ +Y
Sbjct: 905 GDLYIWGNAESGKVGLGVDYTQGCILLPRKINIINKIYK-CSLGNSHSLFLTNTNELYVC 963
Query: 561 GKNANGQLGLGDSQER-----ETPTFVEALRDRQVESVVCGSS 598
G N NG+LGL + + PT V + ++ ++ G++
Sbjct: 964 GSNNNGRLGLFEKSKMVCNIVSVPTKVILHNNIYIKDILAGNT 1006
Score = 71 (30.1 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 45/197 (22%), Positives = 85/197 (43%)
Query: 388 GQLFTYGDGTFGVLGHG--NLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRC 444
G L+ +G+ G +G G Q + P+++ + K+ + G H+ + +
Sbjct: 905 GDLYIWGNAESGKVGLGVDYTQGCILLPRKINIIN--KIYKCSLGNSHSLFLTN------ 956
Query: 445 KSNAIGGKLFTWGDADKGRLGHVDGERKL-----LPTCVTRLVDFDFVQASCGRMLTVGL 499
+N +L+ G + GRLG + + + +PT V + G ++ L
Sbjct: 957 -TN----ELYVCGSNNNGRLGLFEKSKMVCNIVSVPTKVILHNNIYIKDILAGNTYSIIL 1011
Query: 500 TGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSY-HVAVLTSGGSVY 558
+ G +Y G + G GN + + S V+ + VK ++ G Y HV LT ++
Sbjct: 1012 SVDGFIYIFGEFIKGSNGN--SNNMSCEVISLYNEITNVKYMN-GKYEHVFFLTYDNKLF 1068
Query: 559 TWGKNANGQLGLGDSQE 575
G N N Q+ L D+++
Sbjct: 1069 GIGNNKNCQI-LCDNEK 1084
Score = 65 (27.9 bits), Expect = 4.3e-07, Sum P(3) = 4.3e-07
Identities = 18/58 (31%), Positives = 28/58 (48%)
Query: 419 RGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPT 476
+ K+K ++CG HT AI C GG L++WG + G +G+ + PT
Sbjct: 347 KNTKIKFISCGDMHTLAI-------CT----GGVLYSWGYNNFGCIGNGTNQNVYEPT 393
Score = 61 (26.5 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 23/80 (28%), Positives = 36/80 (45%)
Query: 451 GKLFTWGDADKGRLGHVDGERK-------LLPTCVTRLVDFDFVQASCGRMLTVGLTGLG 503
GK++T G G LG+ + K LL CV +++ + +CG + ++ +G
Sbjct: 771 GKVYTAGYNKNGELGNGEFNLKKKFGVPILLNICVNKII-----KIACGYNYVLCVSDVG 825
Query: 504 KVYTMGSAVHGQLGNPKAKD 523
VY G QLG KD
Sbjct: 826 LVYGWGKNDKSQLGIGVIKD 845
Score = 59 (25.8 bits), Expect = 1.3e-08, Sum P(3) = 1.3e-08
Identities = 16/69 (23%), Positives = 30/69 (43%)
Query: 240 SVSQNKTQVDALLP---KLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGH 296
++ +N + D P K++ ++ IS G H + G ++ WG G +G+
Sbjct: 324 NIKENDNKHDWFTPFPMKIVFPKKNTKIKFISCGDMHTLAICTGGVLYSWGYNNFGCIGN 383
Query: 297 KVNMDVSCP 305
N +V P
Sbjct: 384 GTNQNVYEP 392
Score = 51 (23.0 bits), Expect = 2.7e-08, Sum P(3) = 2.7e-08
Identities = 12/37 (32%), Positives = 21/37 (56%)
Query: 283 VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSV 319
V+ +G+G +G LG+K ++ P +E N+Q V
Sbjct: 100 VYSFGKGNNGLLGYKKKREL--PNFLEHEEKKNIQKV 134
Score = 47 (21.6 bits), Expect = 5.3e-05, Sum P(3) = 5.3e-05
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
SCG M T+ + G +Y+ G G +GN
Sbjct: 355 SCGDMHTLAICTGGVLYSWGYNNFGCIGN 383
>UNIPROTKB|F1RQL8 [details] [associations]
symbol:IBTK "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051209 "release of sequestered calcium ion into
cytosol" evidence=IEA] [GO:0030292 "protein tyrosine kinase
inhibitor activity" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 GO:GO:0051209
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 GO:GO:0030292
OMA:VSALHHK GeneTree:ENSGT00700000104160 EMBL:CU392845
Ensembl:ENSSSCT00000004926 Uniprot:F1RQL8
Length = 1346
Score = 206 (77.6 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 81/310 (26%), Positives = 148/310 (47%)
Query: 278 TKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS--GINVQSVSCGEFQTCALTKSGEI 335
T +V+ WG+ + LGH P+LV+ S G+ ++ V +F + L++ G++
Sbjct: 139 TDPTDVYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGVYIKQVVLCKFHSVFLSQKGQV 198
Query: 336 YTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGD 395
YT GH G +G ++ +PR L + L G S+VA + HT +++ G ++T+G
Sbjct: 199 YTCGHGPGGR--LGHGDEQTCLVPR-LVEGLSGHNCSQVAAAKDHTVVLTEDGCVYTFGL 255
Query: 396 GTF---GVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGK 452
F G++ + NV + + + L+G + VA G +HT ++ R A+
Sbjct: 256 NIFHQLGIIPPPSNCNVPRQMQAKYLKGRTIIGVAAGRFHT-----VLWTR---EAV--- 304
Query: 453 LFTWGDADKGRLGHV---DGERKLL-PTCVTRL----VDFDFVQASCGRMLTVGLTGLGK 504
+T G + G+LGH+ GE+ + P V+ L + V AS G TV +T G
Sbjct: 305 -YTLG-LNGGQLGHLLDPSGEKCVTAPRQVSALHHKDIALSLVAASDGA--TVCVTARGD 360
Query: 505 VYTMGSAVHGQLGNPKAKDRSITV----VEGKLKEEFVKGISSGSYHVAVLTSGGS--VY 558
+Y + +L + + + + V +E K+ E +K +G + +L G+ V+
Sbjct: 361 IYLLADYQCKKLASKQLNLKKVLVSGGHMEYKVDPEHLK--ENGGQKICILAMDGAGRVF 418
Query: 559 TWGKNANGQL 568
W ++A+ L
Sbjct: 419 CW-RSASSSL 427
Score = 197 (74.4 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 71/236 (30%), Positives = 112/236 (47%)
Query: 380 HTAIVSTSG-QLFTYGDGTFGVLGHGNLQNVSQPKEVE--SLRGLKVKSVACGPWHTAAI 436
H +T ++T+GD T LGHG+ + P+ V+ S G+ +K V +H+ +
Sbjct: 133 HVVFKNTDPTDVYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGVYIKQVVLCKFHSVFL 192
Query: 437 VDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLT 496
G+++T G GRLGH D + L+P V L + Q + + T
Sbjct: 193 SQ-----------KGQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLSGHNCSQVAAAKDHT 241
Query: 497 VGLTGLGKVYTMGSAVHGQLGN-PKAKDRSIT-VVEGK-LKEEFVKGISSGSYHVAVLTS 553
V LT G VYT G + QLG P + ++ ++ K LK + G+++G +H VL +
Sbjct: 242 VVLTEDGCVYTFGLNIFHQLGIIPPPSNCNVPRQMQAKYLKGRTIIGVAAGRFHT-VLWT 300
Query: 554 GGSVYTWGKNANGQLG--LGDSQER--ETPTFVEALRDRQVESVVCGSSITAAICL 605
+VYT G N GQLG L S E+ P V AL + + + +S A +C+
Sbjct: 301 REAVYTLGLNG-GQLGHLLDPSGEKCVTAPRQVSALHHKDIALSLVAASDGATVCV 355
Score = 179 (68.1 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 70/244 (28%), Positives = 113/244 (46%)
Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
DV WG+ G SQN L+ S V ++ + L H+ +++
Sbjct: 143 DVYTWGDNT------NFTLGHGSQNSKHHPELVDLFSRSGVY--IKQVVLCKFHSVFLSQ 194
Query: 280 EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
+G+V+ G G GRLGH P+LVE LSG N V+ + T LT+ G +YT+G
Sbjct: 195 KGQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLSGHNCSQVAAAKDHTVVLTEDGCVYTFG 254
Query: 340 HNN-HGADLVGERRSRSHWLPRKL-FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYG-DG 396
N H ++ + + +PR++ L G + VA G +HT ++ T ++T G +G
Sbjct: 255 LNIFHQLGIIPPPSNCN--VPRQMQAKYLKGRTIIGVAAGRFHT-VLWTREAVYTLGLNG 311
Query: 397 TFGVLGH----GNLQNVSQPKEVESL--RGLKVKSVACGPWHTAAIV---DI--MVD-RC 444
G LGH + V+ P++V +L + + + VA T + DI + D +C
Sbjct: 312 --GQLGHLLDPSGEKCVTAPRQVSALHHKDIALSLVAASDGATVCVTARGDIYLLADYQC 369
Query: 445 KSNA 448
K A
Sbjct: 370 KKLA 373
>WB|WBGene00021461 [details] [associations]
symbol:nekl-1 species:6239 "Caenorhabditis elegans"
[GO:0004672 "protein kinase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006468 "protein phosphorylation"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] [GO:0004713 "protein tyrosine kinase
activity" evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 GO:GO:0005524 eggNOG:COG0515
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 EMBL:FO081209
KO:K08857 GeneTree:ENSGT00700000104137 RefSeq:NP_490968.2
ProteinModelPortal:Q6AW07 SMR:Q6AW07 EnsemblMetazoa:Y39G10AR.3
GeneID:189769 KEGG:cel:CELE_Y39G10AR.3 UCSC:Y39G10AR.3 CTD:189769
WormBase:Y39G10AR.3 HOGENOM:HOG000017263 InParanoid:Q6AW07
OMA:RNDNTEL NextBio:943564 Uniprot:Q6AW07
Length = 998
Score = 152 (58.6 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 59/232 (25%), Positives = 100/232 (43%)
Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
+ + +VA + HT +++ +LF +GD + G LG G + + VESL+G ++SV
Sbjct: 467 ISIKQVALSKTHTMVLTNDNELFGFGDNSCGQLGFGKFSKMENGRLVESLKGRDIQSVGV 526
Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ 488
G + + I DR G L T+G A LG D + P + +L+ +
Sbjct: 527 GNYFSV----ICCDR-------GTLLTFGTAKNLGLGK-DAKDSAKPMLLEQLLRENIKD 574
Query: 489 ASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD----------RSITVVEGKLK---- 534
CG V + G+ GS +GQLG P + T + G +
Sbjct: 575 IYCGHDHVVAVLESGECLGWGSNQYGQLGLPTLEHFFAPTKVFFLNEATALYGPFQIPMP 634
Query: 535 --EEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGD-----SQERETP 579
++ V G +G +L+ GS+ G N + +L L ++E++TP
Sbjct: 635 SNKKIVYG-KAGKDATMLLSDDGSLIAMGSNKHNKLNLTQRVGFFTKEKKTP 685
Score = 149 (57.5 bits), Expect = 3.3e-12, Sum P(2) = 3.3e-12
Identities = 46/186 (24%), Positives = 83/186 (44%)
Query: 235 GAVDGSVSQNKTQVDALLPKLLESAV-----MLDVQNISLGAKHAALVTKEGEVFCWGEG 289
G++ SVS T D +P + S++ + ++ ++L H ++T + E+F +G+
Sbjct: 436 GSMRSSVSFT-TLYDLHVPTITLSSIPDLPSRISIKQVALSKTHTMVLTNDNELFGFGDN 494
Query: 290 KDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVG 349
G+LG + +LVE L G ++QSV G + + G + T+G A +G
Sbjct: 495 SCGQLGFGKFSKMENGRLVESLKGRDIQSVGVGNYFSVICCDRGTLLTFGT----AKNLG 550
Query: 350 ERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV 409
+ L + L + + CG H V SG+ +G +G LG L++
Sbjct: 551 LGKDAKDSAKPMLLEQLLRENIKDIYCGHDHVVAVLESGECLGWGSNQYGQLGLPTLEHF 610
Query: 410 SQPKEV 415
P +V
Sbjct: 611 FAPTKV 616
Score = 108 (43.1 bits), Expect = 3.3e-12, Sum P(2) = 3.3e-12
Identities = 38/129 (29%), Positives = 58/129 (44%)
Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK-----AKDRSI--------TVVEGKL 533
V G+ T+ L+ G + MGS H +L + K++ T+++G
Sbjct: 640 VYGKAGKDATMLLSDDGSLIAMGSNKHNKLNLTQRVGFFTKEKKTPNDYVNKPTILQGF- 698
Query: 534 KEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTF--VEALRDRQVE 591
E V S GSYH V+ G V +G+N N +LGLG+SQ+ V++L
Sbjct: 699 -PERVVDFSVGSYHSGVILESGQVMIFGRNDNTELGLGNSQKMAVRCVKPVKSLLHHACT 757
Query: 592 SVVCGSSIT 600
V+CG T
Sbjct: 758 HVLCGDGFT 766
>SGD|S000003065 [details] [associations]
symbol:SRM1 "Nucleotide exchange factor for Gsp1p"
species:4932 "Saccharomyces cerevisiae" [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0007067 "mitosis" evidence=IEA] [GO:0019236
"response to pheromone" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IDA]
[GO:0004871 "signal transducer activity" evidence=IMP] [GO:0006810
"transport" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=ISM] [GO:0000054
"ribosomal subunit export from nucleus" evidence=IMP] [GO:0006407
"rRNA export from nucleus" evidence=IMP] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IEA]
SGD:S000003065 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016021
GO:GO:0051301 GO:GO:0007067 EMBL:BK006941 GO:GO:0000790
GO:GO:0004871 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005085 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 GO:GO:0019236 GO:GO:0000054
GeneTree:ENSGT00700000104160 GO:GO:0006407 OMA:PFEAIWA
HOGENOM:HOG000170207 OrthoDB:EOG466ZVF EMBL:M27013 EMBL:Z72619
PIR:A32320 RefSeq:NP_011418.1 PDB:3OF7 PDBsum:3OF7
ProteinModelPortal:P21827 SMR:P21827 DIP:DIP-2315N IntAct:P21827
MINT:MINT-561451 STRING:P21827 PaxDb:P21827 PeptideAtlas:P21827
EnsemblFungi:YGL097W GeneID:852782 KEGG:sce:YGL097W CYGD:YGL097w
EvolutionaryTrace:P21827 NextBio:972265 Genevestigator:P21827
GermOnline:YGL097W Uniprot:P21827
Length = 482
Score = 177 (67.4 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 84/324 (25%), Positives = 139/324 (42%)
Query: 303 SCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVG--ERRSRSHWLPR 360
S P L E G V ++ + +CAL +GE+Y WG ++G + + + P
Sbjct: 157 SFPPLAE---GHKVVQLAATDNMSCALFSNGEVYAWGTFRCNEGILGFYQDKIKIQKTPW 213
Query: 361 KLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLR- 419
K+ T + ++A G+ H + G +F +G+G LG ++ + K ++
Sbjct: 214 KV-PTFSKYNIVQLAPGKDHILFLDEEGMVFAWGNGQQNQLGRKVMERF-RLKTLDPRPF 271
Query: 420 GLK-VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG-HVDGERKLLPTC 477
GL+ VK +A G H A+ K N KL +WG G+ G D E L T
Sbjct: 272 GLRHVKYIASGENHCFALT-------KDN----KLVSWGLNQFGQCGVSEDVEDGALVTK 320
Query: 478 VTRLVDFDFV---QASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITV--VEGK 532
RL D V + G ++ L+ G +Y+ G ++G PK T V GK
Sbjct: 321 PKRLALPDNVVIRSIAAGEHHSLILSQDGDLYSCGRLDMFEVGIPKDNLPEYTYKDVHGK 380
Query: 533 LKE-----------EFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQE-RETPT 580
+ +F K +++GS+H + G Y+WG +GLG ++ E PT
Sbjct: 381 ARAVPLPTKLNNVPKF-KSVAAGSHHSVAVAQNGIAYSWGFGETYAVGLGPFEDDTEVPT 439
Query: 581 FVE--ALRDRQVESVVCGSSITAA 602
++ A +D + V CG + +
Sbjct: 440 RIKNTATQDHNIILVGCGGQFSVS 463
Score = 170 (64.9 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 66/255 (25%), Positives = 109/255 (42%)
Query: 263 DVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGI-NVQSVSC 321
++ ++ G H + +EG VF WG G+ +LG KV L G+ +V+ ++
Sbjct: 222 NIVQLAPGKDHILFLDEEGMVFAWGNGQQNQLGRKVMERFRLKTLDPRPFGLRHVKYIAS 281
Query: 322 GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPR-KLFDTLDGVRVSKVACGEWH 380
GE ALTK ++ +WG N G V E + + K D V + +A GE H
Sbjct: 282 GENHCFALTKDNKLVSWGLNQFGQCGVSEDVEDGALVTKPKRLALPDNVVIRSIAAGEHH 341
Query: 381 TAIVSTSGQLFTYGDGTFGVLG--------------HGNLQNVSQPKEVESLRGLKVKSV 426
+ I+S G L++ G +G HG + V P ++ ++ K KSV
Sbjct: 342 SLILSQDGDLYSCGRLDMFEVGIPKDNLPEYTYKDVHGKARAVPLPTKLNNVP--KFKSV 399
Query: 427 ACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGR--LGHVDGERKLLPTCV--TRLV 482
A G H+ A+ N I ++WG + LG + + ++ PT + T
Sbjct: 400 AAGSHHSVAVAQ--------NGIA---YSWGFGETYAVGLGPFEDDTEV-PTRIKNTATQ 447
Query: 483 DFDFVQASCGRMLTV 497
D + + CG +V
Sbjct: 448 DHNIILVGCGGQFSV 462
Score = 116 (45.9 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 49/181 (27%), Positives = 80/181 (44%)
Query: 451 GKLFTWGD--ADKGRLGHVDGERKL--LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVY 506
G+++ WG ++G LG + K+ P V ++ VQ + G+ + L G V+
Sbjct: 184 GEVYAWGTFRCNEGILGFYQDKIKIQKTPWKVPTFSKYNIVQLAPGKDHILFLDEEGMVF 243
Query: 507 TMGSAVHGQLGNPKAKDR-SITVVEGK-LKEEFVKGISSGSYHVAVLTSGGSVYTWGKNA 564
G+ QLG K +R + ++ + VK I+SG H LT + +WG N
Sbjct: 244 AWGNGQQNQLGR-KVMERFRLKTLDPRPFGLRHVKYIASGENHCFALTKDNKLVSWGLNQ 302
Query: 565 NGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISV---GDQSSCSQCR 621
GQ G+ + E + + R ++VV SI A H S+ + GD SC +
Sbjct: 303 FGQCGVSEDVE-DGALVTKPKRLALPDNVVI-RSIAAGE--HHSLILSQDGDLYSCGRLD 358
Query: 622 M 622
M
Sbjct: 359 M 359
Score = 109 (43.4 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 40/163 (24%), Positives = 77/163 (47%)
Query: 281 GEVFCWGEGK--DGRLGH---KVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEI 335
GEV+ WG + +G LG K+ + + P V S N+ ++ G+ L + G +
Sbjct: 184 GEVYAWGTFRCNEGILGFYQDKIKIQKT-PWKVPTFSKYNIVQLAPGKDHILFLDEEGMV 242
Query: 336 YTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR-VSKVACGEWHTAIVSTSGQLFTYG 394
+ WG+ +G R+ + + L G+R V +A GE H ++ +L ++G
Sbjct: 243 FAWGNGQQNQ--LG-RKVMERFRLKTLDPRPFGLRHVKYIASGENHCFALTKDNKLVSWG 299
Query: 395 DGTFGVLGHG-NLQN---VSQPKEVESLRGLKVKSVACGPWHT 433
FG G ++++ V++PK + + ++S+A G H+
Sbjct: 300 LNQFGQCGVSEDVEDGALVTKPKRLALPDNVVIRSIAAGEHHS 342
Score = 93 (37.8 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 25/79 (31%), Positives = 37/79 (46%)
Query: 272 KHAALVTKEGEVFCWGEGKDGRLGH---KVNMDVSCPKLVECL--SGINVQSVSCGEFQT 326
KH L + ++FCWG G LG N +V P+L L + S + G T
Sbjct: 37 KHMYLSVQPLDIFCWGTGSMCELGLGPLAKNKEVKRPRLNPFLPRDEAKIISFAVGGMHT 96
Query: 327 CALTKSGEIYTWGHNNHGA 345
AL + +++WG N+ GA
Sbjct: 97 LALDEESNVWSWGCNDVGA 115
Score = 65 (27.9 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 18/77 (23%), Positives = 38/77 (49%)
Query: 220 DVMIWGEGVLGGDIG-GAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVT 278
D+ WG G + ++G G + + + +++ LP+ + A ++ + ++G H +
Sbjct: 47 DIFCWGTGSMC-ELGLGPLAKNKEVKRPRLNPFLPR--DEAKII---SFAVGGMHTLALD 100
Query: 279 KEGEVFCWGEGKDGRLG 295
+E V+ WG G LG
Sbjct: 101 EESNVWSWGCNDVGALG 117
Score = 53 (23.7 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 26/81 (32%), Positives = 39/81 (48%)
Query: 390 LFTYGDGTFGVLGHGNL---QNVSQPKEVESL-RG-LKVKSVACGPWHTAAIVDIMVDRC 444
+F +G G+ LG G L + V +P+ L R K+ S A G HT A+ +
Sbjct: 48 IFCWGTGSMCELGLGPLAKNKEVKRPRLNPFLPRDEAKIISFAVGGMHTLALDE------ 101
Query: 445 KSNAIGGKLFTWGDADKGRLG 465
+SN +++WG D G LG
Sbjct: 102 ESN-----VWSWGCNDVGALG 117
Score = 53 (23.7 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 18/86 (20%), Positives = 36/86 (41%)
Query: 334 EIYTWGHNNHGADLVGE-RRSRSHWLPR-KLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
+I+ WG + +G +++ PR F D ++ A G HT + ++
Sbjct: 47 DIFCWGTGSMCELGLGPLAKNKEVKRPRLNPFLPRDEAKIISFAVGGMHTLALDEESNVW 106
Query: 392 TYGDGTFGVLGHGNLQNVSQPKEVES 417
++G G LG Q K++++
Sbjct: 107 SWGCNDVGALGRDTSNAKEQLKDMDA 132
>ASPGD|ASPL0000064315 [details] [associations]
symbol:rcc1 species:162425 "Emericella nidulans"
[GO:0000790 "nuclear chromatin" evidence=IDA] [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0006406
"mRNA export from nucleus" evidence=IEA] [GO:0006407 "rRNA export
from nucleus" evidence=IEA] [GO:0000054 "ribosomal subunit export
from nucleus" evidence=IEA] [GO:0031291 "Ran protein signal
transduction" evidence=IEA] [GO:0042992 "negative regulation of
transcription factor import into nucleus" evidence=IEA] [GO:1901673
"regulation of spindle assembly involved in mitosis" evidence=IEA]
[GO:0060623 "regulation of chromosome condensation" evidence=IEA]
[GO:0007093 "mitotic cell cycle checkpoint" evidence=IEA]
[GO:0030071 "regulation of mitotic metaphase/anaphase transition"
evidence=IEA] [GO:0032888 "regulation of mitotic spindle
elongation" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 EMBL:BN001304
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AACD01000117 eggNOG:COG5184 OMA:PFEAIWA HOGENOM:HOG000170207
OrthoDB:EOG466ZVF RefSeq:XP_664582.1 ProteinModelPortal:Q5AXK2
STRING:Q5AXK2 EnsemblFungi:CADANIAT00000503 GeneID:2870170
KEGG:ani:AN6978.2 Uniprot:Q5AXK2
Length = 533
Score = 161 (61.7 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 74/284 (26%), Positives = 121/284 (42%)
Query: 264 VQNISLGAKHAALVTKEGEVFCWG--EGKDGRLGHKVNMDV-SCPKLVECLSGINVQSVS 320
+ ++ G + +T EG+V+ WG DG LG V + PKL+ L ++ +
Sbjct: 233 IVEVAAGDSSSFALTDEGQVYGWGTFRSNDGILGFDAKTKVQTTPKLLPDLK--KIKHLV 290
Query: 321 CGEFQTCALTKSGEIYTWG---HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
CG+ AL G + +WG N G ++ ER + PR+ F G+ + G
Sbjct: 291 CGDNHVLALNDKGAVLSWGSGQQNQLGRRII-ERNKLNGLQPRE-FGLPKGI--VHIGAG 346
Query: 378 EWHTAIVSTSGQLFTYGDGTFGVLG----HGNLQN-VSQPKEVESLRGLKVKSVACGPWH 432
+H+ V SG++F +G +FG G G+ + + P V+SL V + G H
Sbjct: 347 AFHSFAVHQSGKVFAWGLNSFGETGIRENAGDSEAAIVHPTVVDSLSKKNVTQICGGAHH 406
Query: 433 T-AAIVD---IMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLL-PTCVTRLVDFDFV 487
+ AA D ++ R G K+ T D D D R L+ PT V + V
Sbjct: 407 SIAATQDGECLVWGRLDGYQTGLKIDTLPD-DAVIKDERDRPRILIEPTAVPG-IKAKAV 464
Query: 488 QASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSI-TVVE 530
A + + +G + ++ G + Q G D + TV+E
Sbjct: 465 AAGSDHSIAIDTSG--RPWSWGFSATYQTGQGTQDDVEVATVIE 506
Score = 152 (58.6 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 71/298 (23%), Positives = 125/298 (41%)
Query: 313 GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVG-ERRSRSHWLPRKLFDTLDGVRV 371
G + V+ G+ + ALT G++Y WG ++G + +++ P+ L D ++
Sbjct: 230 GTVIVEVAAGDSSSFALTDEGQVYGWGTFRSNDGILGFDAKTKVQTTPKLLPDLK---KI 286
Query: 372 SKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHG----NLQNVSQPKEVESLRGLKVKSVA 427
+ CG+ H ++ G + ++G G LG N N QP+E +G + +
Sbjct: 287 KHLVCGDNHVLALNDKGAVLSWGSGQQNQLGRRIIERNKLNGLQPREFGLPKG--IVHIG 344
Query: 428 CGPWHTAAIVDI-MVDRCKSNAIG--GKLFTWGDADKGRLGH---VDGERKLLPTCVTRL 481
G +H+ A+ V N+ G G GD++ + H VD K T +
Sbjct: 345 AGAFHSFAVHQSGKVFAWGLNSFGETGIRENAGDSEAA-IVHPTVVDSLSKKNVTQICGG 403
Query: 482 VDFDFVQASCGRMLTVGL-----TGLGKVYTM--GSAVHGQLGNPKAKDRSITVVEGKLK 534
G L G TGL K+ T+ + + + P+ T V G +K
Sbjct: 404 AHHSIAATQDGECLVWGRLDGYQTGL-KIDTLPDDAVIKDERDRPRILIEP-TAVPG-IK 460
Query: 535 EEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVE--ALRDRQV 590
K +++GS H + + G ++WG +A Q G G + E T +E A+R + +
Sbjct: 461 ---AKAVAAGSDHSIAIDTSGRPWSWGFSATYQTGQGTQDDVEVATVIENTAVRGKSL 515
Score = 149 (57.5 bits), Expect = 9.3e-07, P = 9.3e-07
Identities = 58/220 (26%), Positives = 96/220 (43%)
Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
V+ WG G +G + + +NK ++ L P+ E + + +I GA H+ V +
Sbjct: 305 VLSWGSGQQN-QLGRRI---IERNK--LNGLQPR--EFGLPKGIVHIGAGAFHSFAVHQS 356
Query: 281 GEVFCWGEGKDGRLGHKVNMDVS-----CPKLVECLSGINVQSVSCGEFQTCALTKSGEI 335
G+VF WG G G + N S P +V+ LS NV + G + A T+ GE
Sbjct: 357 GKVFAWGLNSFGETGIRENAGDSEAAIVHPTVVDSLSKKNVTQICGGAHHSIAATQDGEC 416
Query: 336 YTWGH-NNHGADL----------VGERRSRSHWLPRKLFD--TLDGVRVSKVACGEWHTA 382
WG + + L + + R R PR L + + G++ VA G H+
Sbjct: 417 LVWGRLDGYQTGLKIDTLPDDAVIKDERDR----PRILIEPTAVPGIKAKAVAAGSDHSI 472
Query: 383 IVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVES--LRG 420
+ TSG+ +++G G G +V +E+ +RG
Sbjct: 473 AIDTSGRPWSWGFSATYQTGQGTQDDVEVATVIENTAVRG 512
Score = 147 (56.8 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 54/209 (25%), Positives = 97/209 (46%)
Query: 245 KTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC 304
KT+V PKLL + ++++ G H + +G V WG G+ +LG ++
Sbjct: 270 KTKVQTT-PKLLPD--LKKIKHLVCGDNHVLALNDKGAVLSWGSGQQNQLGRRIIERNKL 326
Query: 305 PKLVECLSGI--NVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR--SRSHWLPR 360
L G+ + + G F + A+ +SG+++ WG N+ G + E S + +
Sbjct: 327 NGLQPREFGLPKGIVHIGAGAFHSFAVHQSGKVFAWGLNSFGETGIRENAGDSEAAIVHP 386
Query: 361 KLFDTLDGVRVSKVACGEWHTAIVSTS-GQLFTYG--DGTFGVLGHGNLQNVS------- 410
+ D+L V+++ CG H +I +T G+ +G DG L L + +
Sbjct: 387 TVVDSLSKKNVTQI-CGGAHHSIAATQDGECLVWGRLDGYQTGLKIDTLPDDAVIKDERD 445
Query: 411 QPK---EVESLRGLKVKSVACGPWHTAAI 436
+P+ E ++ G+K K+VA G H+ AI
Sbjct: 446 RPRILIEPTAVPGIKAKAVAAGSDHSIAI 474
Score = 81 (33.6 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 30/100 (30%), Positives = 43/100 (43%)
Query: 201 RLVTPTYGSP----LIERKDILK-DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKL 255
R+V P P +I K +V + GEG G++G V +V K L P L
Sbjct: 87 RVVKPAAAKPRPKVVINNAPTAKLNVYVCGEGS-SGELGLGVGKNVIDVKRP--RLNPHL 143
Query: 256 LESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG 295
L V V +++G H +T + +V WG G LG
Sbjct: 144 LPDDV--GVVQVAVGGMHCVALTHDNKVLTWGVNDQGALG 181
>UNIPROTKB|E9PDR5 [details] [associations]
symbol:IBTK "Inhibitor of Bruton tyrosine kinase"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PROSITE:PS50012 EMBL:AL050333
HGNC:HGNC:17853 ChiTaRS:IBTK IPI:IPI00964822
ProteinModelPortal:E9PDR5 SMR:E9PDR5 Ensembl:ENST00000503631
UCSC:uc011dyw.1 ArrayExpress:E9PDR5 Bgee:E9PDR5 Uniprot:E9PDR5
Length = 1152
Score = 197 (74.4 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 70/236 (29%), Positives = 110/236 (46%)
Query: 380 HTAIVSTSG-QLFTYGDGTFGVLGHGNLQNVSQPKEVE--SLRGLKVKSVACGPWHTAAI 436
H +T ++T+GD T LGHG+ + P+ V+ S G+ +K V +H+ +
Sbjct: 133 HVVFKNTDPTDVYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFL 192
Query: 437 VDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLT 496
G+++T G GRLGH D + L+P V L + Q + + T
Sbjct: 193 SQ-----------KGQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLNGHNCSQVAAAKDHT 241
Query: 497 VGLTGLGKVYTMGSAVHGQLG--NPKAKDRSITVVEGK-LKEEFVKGISSGSYHVAVLTS 553
V LT G VYT G + QLG P + ++ K LK + G+++G +H VL +
Sbjct: 242 VVLTEDGCVYTFGLNIFHQLGIIPPPSSCNVPRQIQAKYLKGRTIIGVAAGRFHT-VLWT 300
Query: 554 GGSVYTWGKNANGQLG--LGDSQER--ETPTFVEALRDRQVESVVCGSSITAAICL 605
+VYT G N GQLG L + E+ P V AL + + + +S A +C+
Sbjct: 301 REAVYTMGLNG-GQLGCLLDPNGEKCVTAPRQVSALHHKDIALSLVAASDGATVCV 355
Score = 197 (74.4 bits), Expect = 8.2e-10, Sum P(2) = 8.2e-10
Identities = 80/307 (26%), Positives = 142/307 (46%)
Query: 278 TKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS--GINVQSVSCGEFQTCALTKSGEI 335
T +V+ WG+ + LGH P+LV+ S GI ++ V +F + L++ G++
Sbjct: 139 TDPTDVYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQV 198
Query: 336 YTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGD 395
YT GH G +G ++ +PR L + L+G S+VA + HT +++ G ++T+G
Sbjct: 199 YTCGHGPGGR--LGHGDEQTCLVPR-LVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTFGL 255
Query: 396 GTF---GVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGK 452
F G++ + NV + + + L+G + VA G +HT V N GG+
Sbjct: 256 NIFHQLGIIPPPSSCNVPRQIQAKYLKGRTIIGVAAGRFHTVLWTREAVYTMGLN--GGQ 313
Query: 453 LFTWGDADKGRLGHVDGERKLL-PTCVTRL----VDFDFVQASCGRMLTVGLTGLGKVYT 507
L G L +GE+ + P V+ L + V AS G TV +T G +Y
Sbjct: 314 L--------GCLLDPNGEKCVTAPRQVSALHHKDIALSLVAASDGA--TVCVTTRGDIYL 363
Query: 508 MGSAVHGQLGNPKAKDRSITV----VEGKLKEEFVKGISSGSYHVAVLTSGGS--VYTWG 561
+ ++ + + + + V +E K+ E +K +G + +L G+ V+ W
Sbjct: 364 LADYQCKKMASKQLNLKKVLVSGGHMEYKVDPEHLK--ENGGQKICILAMDGAGRVFCW- 420
Query: 562 KNANGQL 568
++ N L
Sbjct: 421 RSVNSSL 427
Score = 180 (68.4 bits), Expect = 5.2e-08, Sum P(2) = 5.2e-08
Identities = 68/242 (28%), Positives = 111/242 (45%)
Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
DV WG+ G SQN L+ S + ++ + L H+ +++
Sbjct: 143 DVYTWGDNT------NFTLGHGSQNSKHHPELVDLFSRSGIY--IKQVVLCKFHSVFLSQ 194
Query: 280 EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
+G+V+ G G GRLGH P+LVE L+G N V+ + T LT+ G +YT+G
Sbjct: 195 KGQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTFG 254
Query: 340 HNN-HGADLVGERRSRSHWLPRKL-FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYG--D 395
N H ++ S + +PR++ L G + VA G +HT ++ T ++T G
Sbjct: 255 LNIFHQLGIIPPPSSCN--VPRQIQAKYLKGRTIIGVAAGRFHT-VLWTREAVYTMGLNG 311
Query: 396 GTFGVLGHGNLQN-VSQPKEVESL--RGLKVKSVACGPWHTAAIV---DI--MVD-RCKS 446
G G L N + V+ P++V +L + + + VA T + DI + D +CK
Sbjct: 312 GQLGCLLDPNGEKCVTAPRQVSALHHKDIALSLVAASDGATVCVTTRGDIYLLADYQCKK 371
Query: 447 NA 448
A
Sbjct: 372 MA 373
Score = 37 (18.1 bits), Expect = 8.2e-10, Sum P(2) = 8.2e-10
Identities = 6/26 (23%), Positives = 14/26 (53%)
Query: 569 GLGDSQERETPTFVEALRDRQVESVV 594
G+G ++ ++P F ++E+ V
Sbjct: 835 GVGSPRDLQSPDFTTGFHSDKIEAKV 860
>UNIPROTKB|E7EPI0 [details] [associations]
symbol:IBTK "Inhibitor of Bruton tyrosine kinase"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PROSITE:PS50012 EMBL:AL050333
HGNC:HGNC:17853 ChiTaRS:IBTK IPI:IPI00964356
ProteinModelPortal:E7EPI0 SMR:E7EPI0 Ensembl:ENST00000510291
UCSC:uc011dyv.1 ArrayExpress:E7EPI0 Bgee:E7EPI0 Uniprot:E7EPI0
Length = 1338
Score = 197 (74.4 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 70/236 (29%), Positives = 110/236 (46%)
Query: 380 HTAIVSTSG-QLFTYGDGTFGVLGHGNLQNVSQPKEVE--SLRGLKVKSVACGPWHTAAI 436
H +T ++T+GD T LGHG+ + P+ V+ S G+ +K V +H+ +
Sbjct: 133 HVVFKNTDPTDVYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFL 192
Query: 437 VDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLT 496
G+++T G GRLGH D + L+P V L + Q + + T
Sbjct: 193 SQ-----------KGQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLNGHNCSQVAAAKDHT 241
Query: 497 VGLTGLGKVYTMGSAVHGQLG--NPKAKDRSITVVEGK-LKEEFVKGISSGSYHVAVLTS 553
V LT G VYT G + QLG P + ++ K LK + G+++G +H VL +
Sbjct: 242 VVLTEDGCVYTFGLNIFHQLGIIPPPSSCNVPRQIQAKYLKGRTIIGVAAGRFHT-VLWT 300
Query: 554 GGSVYTWGKNANGQLG--LGDSQER--ETPTFVEALRDRQVESVVCGSSITAAICL 605
+VYT G N GQLG L + E+ P V AL + + + +S A +C+
Sbjct: 301 REAVYTMGLNG-GQLGCLLDPNGEKCVTAPRQVSALHHKDIALSLVAASDGATVCV 355
Score = 197 (74.4 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 80/307 (26%), Positives = 142/307 (46%)
Query: 278 TKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS--GINVQSVSCGEFQTCALTKSGEI 335
T +V+ WG+ + LGH P+LV+ S GI ++ V +F + L++ G++
Sbjct: 139 TDPTDVYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQV 198
Query: 336 YTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGD 395
YT GH G +G ++ +PR L + L+G S+VA + HT +++ G ++T+G
Sbjct: 199 YTCGHGPGGR--LGHGDEQTCLVPR-LVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTFGL 255
Query: 396 GTF---GVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGK 452
F G++ + NV + + + L+G + VA G +HT V N GG+
Sbjct: 256 NIFHQLGIIPPPSSCNVPRQIQAKYLKGRTIIGVAAGRFHTVLWTREAVYTMGLN--GGQ 313
Query: 453 LFTWGDADKGRLGHVDGERKLL-PTCVTRL----VDFDFVQASCGRMLTVGLTGLGKVYT 507
L G L +GE+ + P V+ L + V AS G TV +T G +Y
Sbjct: 314 L--------GCLLDPNGEKCVTAPRQVSALHHKDIALSLVAASDGA--TVCVTTRGDIYL 363
Query: 508 MGSAVHGQLGNPKAKDRSITV----VEGKLKEEFVKGISSGSYHVAVLTSGGS--VYTWG 561
+ ++ + + + + V +E K+ E +K +G + +L G+ V+ W
Sbjct: 364 LADYQCKKMASKQLNLKKVLVSGGHMEYKVDPEHLK--ENGGQKICILAMDGAGRVFCW- 420
Query: 562 KNANGQL 568
++ N L
Sbjct: 421 RSVNSSL 427
Score = 180 (68.4 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 68/242 (28%), Positives = 111/242 (45%)
Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
DV WG+ G SQN L+ S + ++ + L H+ +++
Sbjct: 143 DVYTWGDNT------NFTLGHGSQNSKHHPELVDLFSRSGIY--IKQVVLCKFHSVFLSQ 194
Query: 280 EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
+G+V+ G G GRLGH P+LVE L+G N V+ + T LT+ G +YT+G
Sbjct: 195 KGQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTFG 254
Query: 340 HNN-HGADLVGERRSRSHWLPRKL-FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYG--D 395
N H ++ S + +PR++ L G + VA G +HT ++ T ++T G
Sbjct: 255 LNIFHQLGIIPPPSSCN--VPRQIQAKYLKGRTIIGVAAGRFHT-VLWTREAVYTMGLNG 311
Query: 396 GTFGVLGHGNLQN-VSQPKEVESL--RGLKVKSVACGPWHTAAIV---DI--MVD-RCKS 446
G G L N + V+ P++V +L + + + VA T + DI + D +CK
Sbjct: 312 GQLGCLLDPNGEKCVTAPRQVSALHHKDIALSLVAASDGATVCVTTRGDIYLLADYQCKK 371
Query: 447 NA 448
A
Sbjct: 372 MA 373
Score = 53 (23.7 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 13/55 (23%), Positives = 28/55 (50%)
Query: 542 SSGSYHVA-VLTSGGSVYTWGKNANGQL-GLGDSQERETPTFVEALRDRQVESVV 594
SSG Y+++ ++ S S ++ G G+G ++ ++P F ++E+ V
Sbjct: 992 SSGGYNLSDIIQSPSSTELLTSDSEGSYAGVGSPRDLQSPDFTTGFHSDKIEAKV 1046
>UNIPROTKB|Q9P2D0 [details] [associations]
symbol:IBTK "Inhibitor of Bruton tyrosine kinase"
species:9606 "Homo sapiens" [GO:0016020 "membrane" evidence=IEA]
[GO:0001933 "negative regulation of protein phosphorylation"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0019901
"protein kinase binding" evidence=IDA] [GO:0030292 "protein
tyrosine kinase inhibitor activity" evidence=IDA] [GO:0051209
"release of sequestered calcium ion into cytosol" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=IDA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 GO:GO:0019901
GO:GO:0016020 Pathway_Interaction_DB:bcr_5pathway GO:GO:0051209
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GO:GO:0030292 EMBL:DQ005633 EMBL:DQ005634
EMBL:DQ005635 EMBL:AB037838 EMBL:AL050333 EMBL:BC027490
EMBL:BC038244 EMBL:BC042171 EMBL:BC113696 EMBL:BC113698
EMBL:AL050018 EMBL:AF235049 IPI:IPI00792333 IPI:IPI00829736
IPI:IPI00910313 PIR:T08705 RefSeq:NP_056340.2 UniGene:Hs.306425
ProteinModelPortal:Q9P2D0 SMR:Q9P2D0 IntAct:Q9P2D0 MINT:MINT-215747
STRING:Q9P2D0 PhosphoSite:Q9P2D0 DMDM:134034141 PaxDb:Q9P2D0
PRIDE:Q9P2D0 DNASU:25998 Ensembl:ENST00000306270 GeneID:25998
KEGG:hsa:25998 UCSC:uc003pjl.1 UCSC:uc003pjm.2 CTD:25998
GeneCards:GC06M082879 HGNC:HGNC:17853 HPA:HPA023826 MIM:606457
neXtProt:NX_Q9P2D0 PharmGKB:PA134898277 HOVERGEN:HBG081779
InParanoid:Q9P2D0 OMA:VSALHHK OrthoDB:EOG4J6RQ1 ChiTaRS:IBTK
GenomeRNAi:25998 NextBio:47714 ArrayExpress:Q9P2D0 Bgee:Q9P2D0
Genevestigator:Q9P2D0 Uniprot:Q9P2D0
Length = 1353
Score = 197 (74.4 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 70/236 (29%), Positives = 110/236 (46%)
Query: 380 HTAIVSTSG-QLFTYGDGTFGVLGHGNLQNVSQPKEVE--SLRGLKVKSVACGPWHTAAI 436
H +T ++T+GD T LGHG+ + P+ V+ S G+ +K V +H+ +
Sbjct: 133 HVVFKNTDPTDVYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFL 192
Query: 437 VDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLT 496
G+++T G GRLGH D + L+P V L + Q + + T
Sbjct: 193 SQ-----------KGQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLNGHNCSQVAAAKDHT 241
Query: 497 VGLTGLGKVYTMGSAVHGQLG--NPKAKDRSITVVEGK-LKEEFVKGISSGSYHVAVLTS 553
V LT G VYT G + QLG P + ++ K LK + G+++G +H VL +
Sbjct: 242 VVLTEDGCVYTFGLNIFHQLGIIPPPSSCNVPRQIQAKYLKGRTIIGVAAGRFHT-VLWT 300
Query: 554 GGSVYTWGKNANGQLG--LGDSQER--ETPTFVEALRDRQVESVVCGSSITAAICL 605
+VYT G N GQLG L + E+ P V AL + + + +S A +C+
Sbjct: 301 REAVYTMGLNG-GQLGCLLDPNGEKCVTAPRQVSALHHKDIALSLVAASDGATVCV 355
Score = 197 (74.4 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 80/307 (26%), Positives = 142/307 (46%)
Query: 278 TKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS--GINVQSVSCGEFQTCALTKSGEI 335
T +V+ WG+ + LGH P+LV+ S GI ++ V +F + L++ G++
Sbjct: 139 TDPTDVYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQV 198
Query: 336 YTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGD 395
YT GH G +G ++ +PR L + L+G S+VA + HT +++ G ++T+G
Sbjct: 199 YTCGHGPGGR--LGHGDEQTCLVPR-LVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTFGL 255
Query: 396 GTF---GVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGK 452
F G++ + NV + + + L+G + VA G +HT V N GG+
Sbjct: 256 NIFHQLGIIPPPSSCNVPRQIQAKYLKGRTIIGVAAGRFHTVLWTREAVYTMGLN--GGQ 313
Query: 453 LFTWGDADKGRLGHVDGERKLL-PTCVTRL----VDFDFVQASCGRMLTVGLTGLGKVYT 507
L G L +GE+ + P V+ L + V AS G TV +T G +Y
Sbjct: 314 L--------GCLLDPNGEKCVTAPRQVSALHHKDIALSLVAASDGA--TVCVTTRGDIYL 363
Query: 508 MGSAVHGQLGNPKAKDRSITV----VEGKLKEEFVKGISSGSYHVAVLTSGGS--VYTWG 561
+ ++ + + + + V +E K+ E +K +G + +L G+ V+ W
Sbjct: 364 LADYQCKKMASKQLNLKKVLVSGGHMEYKVDPEHLK--ENGGQKICILAMDGAGRVFCW- 420
Query: 562 KNANGQL 568
++ N L
Sbjct: 421 RSVNSSL 427
Score = 180 (68.4 bits), Expect = 7.6e-08, Sum P(2) = 7.6e-08
Identities = 68/242 (28%), Positives = 111/242 (45%)
Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
DV WG+ G SQN L+ S + ++ + L H+ +++
Sbjct: 143 DVYTWGDNT------NFTLGHGSQNSKHHPELVDLFSRSGIY--IKQVVLCKFHSVFLSQ 194
Query: 280 EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
+G+V+ G G GRLGH P+LVE L+G N V+ + T LT+ G +YT+G
Sbjct: 195 KGQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTFG 254
Query: 340 HNN-HGADLVGERRSRSHWLPRKL-FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYG--D 395
N H ++ S + +PR++ L G + VA G +HT ++ T ++T G
Sbjct: 255 LNIFHQLGIIPPPSSCN--VPRQIQAKYLKGRTIIGVAAGRFHT-VLWTREAVYTMGLNG 311
Query: 396 GTFGVLGHGNLQN-VSQPKEVESL--RGLKVKSVACGPWHTAAIV---DI--MVD-RCKS 446
G G L N + V+ P++V +L + + + VA T + DI + D +CK
Sbjct: 312 GQLGCLLDPNGEKCVTAPRQVSALHHKDIALSLVAASDGATVCVTTRGDIYLLADYQCKK 371
Query: 447 NA 448
A
Sbjct: 372 MA 373
Score = 37 (18.1 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 6/26 (23%), Positives = 14/26 (53%)
Query: 569 GLGDSQERETPTFVEALRDRQVESVV 594
G+G ++ ++P F ++E+ V
Sbjct: 1036 GVGSPRDLQSPDFTTGFHSDKIEAKV 1061
>UNIPROTKB|C9JQZ4 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0031965 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341 IPI:IPI00925791
ProteinModelPortal:C9JQZ4 SMR:C9JQZ4 STRING:C9JQZ4
Ensembl:ENST00000430407 ArrayExpress:C9JQZ4 Bgee:C9JQZ4
Uniprot:C9JQZ4
Length = 283
Score = 181 (68.8 bits), Expect = 4.0e-11, P = 4.0e-11
Identities = 83/269 (30%), Positives = 126/269 (46%)
Query: 273 HAALVTKEGEVFCWGEGKDGRLGHKVN-MDVSCPKLVECLSGINVQSVSCGEFQTCALTK 331
H + T+ G V G+G G+LG N M+ P LV + VQ+ G T L+K
Sbjct: 27 HRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDV-VQA-EAGGMHTVCLSK 84
Query: 332 SGEIYTWGHNNHGADLVGERRS--RSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQ 389
SG++Y++G N+ GA +G S S +P K+ + + +V +V+ G+ HTA ++ G+
Sbjct: 85 SGQVYSFGCNDEGA--LGRDTSVEGSEMVPGKV-ELQE--KVVQVSAGDSHTAALTDDGR 139
Query: 390 LFTYGD--GTFGVLGHGNLQNVSQ-PKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
+F +G GV+G S P +V+ + V VA G H +V + D
Sbjct: 140 VFLWGSFRDNNGVIGLLEPMKKSMVPVQVQL--DVPVVKVASGNDH---LVMLTAD---- 190
Query: 447 NAIGGKLFTWGDADKGRLGHV----------DG-ERKLLPTCV---TR--LVDFDFVQAS 490
G L+T G ++G+LG V G ER L+P CV +R F A
Sbjct: 191 ----GDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAF 246
Query: 491 CGRMLTVGLTGLGKVYTMGSAVHGQLGNP 519
CG T ++ G VY G + + QLG P
Sbjct: 247 CGAYFTFAISHEGHVYGFGLSNYHQLGTP 275
Score = 166 (63.5 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 53/152 (34%), Positives = 78/152 (51%)
Query: 451 GKLFTWGDADKGRLGHVDG--ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTM 508
G + T G D G+LG + ERK P V+ + D VQA G M TV L+ G+VY+
Sbjct: 35 GLVLTLGQGDVGQLGLGENVMERKK-PALVS--IPEDVVQAEAGGMHTVCLSKSGQVYSF 91
Query: 509 GSAVHGQLGNPKAKDRSITVVEGKLK-EEFVKGISSGSYHVAVLTSGGSVYTWG--KNAN 565
G G LG + + S +V GK++ +E V +S+G H A LT G V+ WG ++ N
Sbjct: 92 GCNDEGALGRDTSVEGS-EMVPGKVELQEKVVQVSAGDSHTAALTDDGRVFLWGSFRDNN 150
Query: 566 GQLGLGDSQERETPTFVEALRDRQVESVVCGS 597
G +GL + ++ V+ D V V G+
Sbjct: 151 GVIGLLEPMKKSMVP-VQVQLDVPVVKVASGN 181
Score = 162 (62.1 bits), Expect = 7.3e-09, P = 7.3e-09
Identities = 52/168 (30%), Positives = 83/168 (49%)
Query: 239 GSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKV 298
G + + ++ P L+ ++ DV G H ++K G+V+ +G +G LG
Sbjct: 46 GQLGLGENVMERKKPALV--SIPEDVVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDT 103
Query: 299 NMDVS--CPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG--HNNHGADLVGERRSR 354
+++ S P VE + VQ VS G+ T ALT G ++ WG +N+G + E +
Sbjct: 104 SVEGSEMVPGKVELQEKV-VQ-VSAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLEPMKK 161
Query: 355 SHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLG 402
S +P ++ LD V V KVA G H +++ G L+T G G G LG
Sbjct: 162 S-MVPVQV--QLD-VPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLG 205
Score = 141 (54.7 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 65/222 (29%), Positives = 100/222 (45%)
Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQ--PKEVESLRGLKVKSVAC 428
V + G HT +S SGQ++++G G LG S+ P +VE KV V+
Sbjct: 69 VVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQE--KVVQVSA 126
Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA--DKGRLGHVDGERK-LLPTCVTRLVDFD 485
G HTAA+ D G++F WG + G +G ++ +K ++P V +D
Sbjct: 127 GDSHTAALTD-----------DGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQ--LDVP 173
Query: 486 FVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN-PK--AKDRSITVVEGKLKEEFVKGIS 542
V+ + G V LT G +YT+G GQLG P+ A +E L + V S
Sbjct: 174 VVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKS 233
Query: 543 SGSY-HVAVLTSG-GSVYTWGKNANGQL---GLGDSQERETP 579
GS HV + G+ +T+ + G + GL + + TP
Sbjct: 234 RGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLGTP 275
>UNIPROTKB|J9NZT9 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 EMBL:AAEX03016754 EMBL:AAEX03016753
Ensembl:ENSCAFT00000045241 Uniprot:J9NZT9
Length = 865
Score = 206 (77.6 bits), Expect = 4.2e-11, Sum P(2) = 4.2e-11
Identities = 51/138 (36%), Positives = 72/138 (52%)
Query: 280 EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
EG VF WG G+LG D P V+ L V +SCGE T LTKSG ++T+G
Sbjct: 23 EGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFG 82
Query: 340 HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT-AIVSTSGQLFTYGDGTF 398
+ G +G PR++ + + G V+++ACG HT A V +SG ++ +G G
Sbjct: 83 AGSCGQ--LGHDSMNDEVNPRRVLELM-GSEVTQIACGRQHTLAFVPSSGLIYAFGCGAK 139
Query: 399 GVLGHGNLQNVSQPKEVE 416
G LG G+ NV P V+
Sbjct: 140 GQLGTGHTCNVKCPSPVK 157
Score = 184 (69.8 bits), Expect = 9.2e-09, Sum P(2) = 9.2e-09
Identities = 45/133 (33%), Positives = 68/133 (51%)
Query: 333 GEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFT 392
G ++ WG NN G + + R KL T +V ++CGE HTA+++ SG +FT
Sbjct: 24 GAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQ---KVVYISCGEEHTAVLTKSGGVFT 80
Query: 393 YGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGK 452
+G G+ G LGH ++ + P+ V L G +V +ACG HT A V G
Sbjct: 81 FGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPS----------SGL 130
Query: 453 LFTWGDADKGRLG 465
++ +G KG+LG
Sbjct: 131 IYAFGCGAKGQLG 143
Score = 152 (58.6 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 46/134 (34%), Positives = 63/134 (47%)
Query: 451 GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
G +F WG + G+LG D E + P V L V SCG T LT G V+T G+
Sbjct: 24 GAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGA 83
Query: 511 AVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWGKNANGQLG 569
GQLG+ D +L V I+ G H +A + S G +Y +G A GQLG
Sbjct: 84 GSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAKGQLG 143
Query: 570 LGDSQERETPTFVE 583
G + + P+ V+
Sbjct: 144 TGHTCNVKCPSPVK 157
Score = 37 (18.1 bits), Expect = 4.2e-11, Sum P(2) = 4.2e-11
Identities = 10/44 (22%), Positives = 24/44 (54%)
Query: 770 IPKTQMSTHSPLLRKISLGSNFIPIASTVEKDLSESNKMLNEEV 813
IP M++ +++ + G ++P+A T +L + K ++E+
Sbjct: 805 IPIYGMASLQIVIQSTASGEEYLPVAHTCY-NLLDLPKYSSKEI 847
>DICTYBASE|DDB_G0280093 [details] [associations]
symbol:gacGG "RhoGAP domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0007165 "signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0043547 "positive regulation of GTPase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005096
"GTPase activator activity" evidence=IEA] InterPro:IPR000198
InterPro:IPR008936 Pfam:PF00620 PROSITE:PS50238 SMART:SM00324
dictyBase:DDB_G0280093 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 GO:GO:0007165 GO:GO:0005096 GO:GO:0043547
Gene3D:1.10.555.10 SUPFAM:SSF48350 GenomeReviews:CM000152_GR
EMBL:AAFI02000035 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 HSSP:Q07960 RefSeq:XP_641238.1
ProteinModelPortal:Q54VW7 EnsemblProtists:DDB0233849 GeneID:8622369
KEGG:ddi:DDB_G0280093 InParanoid:Q54VW7 OMA:INSIVEC Uniprot:Q54VW7
Length = 1203
Score = 155 (59.6 bits), Expect = 4.2e-11, Sum P(3) = 4.2e-11
Identities = 53/176 (30%), Positives = 87/176 (49%)
Query: 270 GAKHAALVTKEGEVFCWGEGKDGRLG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCA 328
G H+ +T+ GE++ WG+ + +L +K + P ++ + V+S+SCG + A
Sbjct: 42 GYNHSLALTETGELYGWGDNRHHQLSSNKAITSIDKPIKIQVIPNQRVKSISCGGNFSAA 101
Query: 329 LTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSG 388
+ ++G +Y WG + G + + S P K+ D L GV V+ G H A+V+ S
Sbjct: 102 IMENGLLYVWG-----TLIEGGKCTES---PTKV-DLLKGVTC--VSIGINHCAVVADSP 150
Query: 389 ------QLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVD 438
++T+G G LG + P+ V +L G K SV CG TAAIV+
Sbjct: 151 TTPEKRSVYTWGTNRKGQLGVVGDSITNAPRRV-TL-GSKAISVCCGEEFTAAIVE 204
Score = 142 (55.0 bits), Expect = 9.6e-10, Sum P(3) = 9.6e-10
Identities = 55/200 (27%), Positives = 86/200 (43%)
Query: 280 EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
+G ++CWG+ G K + P + +G N + ALT++GE+Y WG
Sbjct: 13 QGVLYCWGDKFSG----KPTFNPLIPNICFMDNGYN---------HSLALTETGELYGWG 59
Query: 340 HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
N H L + S P K+ + RV ++CG +A + +G L+ +G
Sbjct: 60 DNRHH-QLSSNKAITSIDKPIKI-QVIPNQRVKSISCGGNFSAAIMENGLLYVWG----- 112
Query: 400 VLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
L G + P +V+ L+G V V+ G H A + D K + ++TWG
Sbjct: 113 TLIEGG-KCTESPTKVDLLKG--VTCVSIGINHCAVVADSPTTPEKRS-----VYTWGTN 164
Query: 460 DKGRLGHVDGERKLLPTCVT 479
KG+LG V P VT
Sbjct: 165 RKGQLGVVGDSITNAPRRVT 184
Score = 100 (40.3 bits), Expect = 4.2e-11, Sum P(3) = 4.2e-11
Identities = 31/120 (25%), Positives = 58/120 (48%)
Query: 450 GGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMG 509
G ++F WG +K R + +++ V + D V+ SC + +G+G V G
Sbjct: 205 GNEVFVWG-YNKSRQICSNNSDEIISIPVKPFLGRDIVELSCTKNYIAARSGVGNVCVWG 263
Query: 510 SAVHG-QLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
S ++G+ D+ I K+K+ IS+ + H+ VL+ G +++WG + + QL
Sbjct: 264 SNEQVCRIGD----DKFINF-PNKIKQ-----ISASTSHILVLSEKGEIFSWGNSEDNQL 313
Score = 55 (24.4 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 23/97 (23%), Positives = 40/97 (41%)
Query: 656 PNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLN-LQGSLSEEVKEEKGALTPSR 714
PNK K +H+ ++ G + N L + L + S + G TP+
Sbjct: 280 PNKIKQ---ISASTSHILVLSEKGEIFSWGNSEDNQLSHKLDVNSSPNINSSSGTTTPTT 336
Query: 715 GQSFTSKQSRNVERKPGECLESASSLSSGLQRWGQVS 751
+ T+K+S ++ LE + LS + WG+ S
Sbjct: 337 NTTTTTKKS-TLQFNNVYQLEGRNVLS--VYSWGKSS 370
Score = 49 (22.3 bits), Expect = 5.4e-06, Sum P(4) = 5.4e-06
Identities = 6/16 (37%), Positives = 13/16 (81%)
Query: 451 GKLFTWGDADKGRLGH 466
G++F+WG+++ +L H
Sbjct: 300 GEIFSWGNSEDNQLSH 315
Score = 43 (20.2 bits), Expect = 5.4e-06, Sum P(4) = 5.4e-06
Identities = 13/65 (20%), Positives = 29/65 (44%)
Query: 471 RKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVE 530
R+LL ++ L + + Q + +G L V+ G++GN + + I ++
Sbjct: 525 RQLLIYLLSFLQEISYSQIKYQKQNAMGEKNLAIVFAPNILTRGEIGNDEIVEDMIRLLP 584
Query: 531 GKLKE 535
+K+
Sbjct: 585 TIMKQ 589
Score = 41 (19.5 bits), Expect = 4.2e-11, Sum P(3) = 4.2e-11
Identities = 14/61 (22%), Positives = 23/61 (37%)
Query: 683 KQENQSPRNLLNLQGSLSEEVKEEKGALTPSRGQSFTSKQSRNVERKPGECLESASSLSS 742
K+ N + N+ N + + L+PS S +QS +SLS+
Sbjct: 663 KENNNNNNNINNSNNNNTNNTNISPTTLSPSTLSSSQQQQSTPSSLTSSPSPSQRNSLST 722
Query: 743 G 743
G
Sbjct: 723 G 723
Score = 41 (19.5 bits), Expect = 4.2e-11, Sum P(3) = 4.2e-11
Identities = 36/172 (20%), Positives = 67/172 (38%)
Query: 675 ITHSGRLLKQENQSPRNLLNLQGSLSEEVKEEKGALTPSRGQSFTSKQSRNVERKPGECL 734
++ SG + S NLLN G + ++ + + G S + S N G
Sbjct: 799 LSFSGGTPSSRDSSVNNLLNTSGGAIQSIQRQFA----NSGSSSNNNNSNNSPSLIGSNS 854
Query: 735 ESASSLSSGLQRWGQVSCPIRFKTHCHEKSVEPTPIPKTQMSTHSPLLRKI-SLGSN--- 790
A + S+ G + I T +EK + P + + +L I L +N
Sbjct: 855 SPALTFSNSS---GNL---IE-TTKLYEKVLALILSPVLPIGSIMKVLPSIFELDTNNDL 907
Query: 791 FIPIASTVEKDLSESNKMLNEEVQRLRDQARNLEKQCQIGNQKVQECQQKIE 842
FI + +T+ K + L+E +Q+ + + QC K ++ + +E
Sbjct: 908 FIRLLTTI-KLVRTVRSNLDEFIQQQLVMIKEIN-QCSQFIDKAKQLNENVE 957
>DICTYBASE|DDB_G0282381 [details] [associations]
symbol:gefC "Ras nucleotide exchange factor"
species:44689 "Dictyostelium discoideum" [GO:0051056 "regulation of
small GTPase mediated signal transduction" evidence=IEA]
[GO:0035023 "regulation of Rho protein signal transduction"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005089 "Rho guanyl-nucleotide exchange factor
activity" evidence=IEA] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IEA] InterPro:IPR000219
InterPro:IPR000651 InterPro:IPR001895 InterPro:IPR008937
InterPro:IPR019804 Pfam:PF00617 Pfam:PF00618 Pfam:PF00621
PROSITE:PS00720 PROSITE:PS00741 PROSITE:PS50009 PROSITE:PS50010
PROSITE:PS50212 SMART:SM00147 SMART:SM00229 dictyBase:DDB_G0282381
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0007264 EMBL:AAFI02000047
GenomeReviews:CM000152_GR GO:GO:0005622 GO:GO:0005089
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
Gene3D:1.10.840.10 InterPro:IPR023578 SUPFAM:SSF48366
PANTHER:PTHR23113 HSSP:Q07889 EMBL:AY160092 RefSeq:XP_640241.1
ProteinModelPortal:Q8IS20 STRING:Q8IS20 EnsemblProtists:DDB0215004
GeneID:8623780 KEGG:ddi:DDB_G0282381 InParanoid:Q8IS20 OMA:SIATIRG
Uniprot:Q8IS20
Length = 1457
Score = 154 (59.3 bits), Expect = 8.5e-11, Sum P(2) = 8.5e-11
Identities = 61/222 (27%), Positives = 102/222 (45%)
Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
V +A G +TA ++ G+L+ +G G LG G+ + P V L+ V ++AC
Sbjct: 416 VKYIATGVKNTAALTEWGELYMWGINEHGELGLGDTIDRRTPTRVIRLKNEVVSTIACSS 475
Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQAS 490
H+A C + + GK++ WG +D+ G + LP + +D + +++
Sbjct: 476 THSA---------CYTES--GKMYVWGQSDE--TGKIQAIPSPLP--IHSYLDRE-IKSP 519
Query: 491 CGRMLTVGLTGLGKVYTMGS-----AVHGQLGNPKAKD-RSITV-VEGKLKEEFVKGISS 543
G + G GK+ + AV Q+G + I + + L+ V+ I
Sbjct: 520 NGGGVGGFFGGGGKIKQLACGQRCIAVLTQMGEVFMWEIPGIPIPLRNALENHSVRNIVM 579
Query: 544 GSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEAL 585
G++H+ LT G V T G+N GQLG D+ E E P V+ L
Sbjct: 580 GNFHLVCLTDSGEVVTIGRNKTGQLGRTDA-ENE-PGIVKQL 619
Score = 146 (56.5 bits), Expect = 6.9e-11, Sum P(3) = 6.9e-11
Identities = 33/98 (33%), Positives = 53/98 (54%)
Query: 518 NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERE 577
+P + T ++ + VK I++G + A LT G +Y WG N +G+LGLGD+ +R
Sbjct: 396 SPSSSSLQTTCTPKMVEIKCVKYIATGVKNTAALTEWGELYMWGINEHGELGLGDTIDRR 455
Query: 578 TPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQS 615
TPT V L++ V ++ C S+ +A + V QS
Sbjct: 456 TPTRVIRLKNEVVSTIACSSTHSACYTESGKMYVWGQS 493
Score = 146 (56.5 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 60/261 (22%), Positives = 110/261 (42%)
Query: 236 AVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG 295
A S S + Q PK++E V+ I+ G K+ A +T+ GE++ WG + G LG
Sbjct: 392 ASSSSPSSSSLQTTCT-PKMVEIKC---VKYIATGVKNTAALTEWGELYMWGINEHGELG 447
Query: 296 HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADL--VGERRS 353
+D P V L V +++C + T+SG++Y WG ++ + +
Sbjct: 448 LGDTIDRRTPTRVIRLKNEVVSTIACSSTHSACYTESGKMYVWGQSDETGKIQAIPSPLP 507
Query: 354 RSHWLPRKLFDTLDGV---------RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHG 404
+L R++ G ++ ++ACG+ A+++ G++F +
Sbjct: 508 IHSYLDREIKSPNGGGVGGFFGGGGKIKQLACGQRCIAVLTQMGEVFMW----------- 556
Query: 405 NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRL 464
+ + P +L V+++ G +H + D G++ T G G+L
Sbjct: 557 EIPGIPIPLR-NALENHSVRNIVMGNFHLVCLTD-----------SGEVVTIGRNKTGQL 604
Query: 465 GHVDGERKLLPTCVTRLVDFD 485
G D E + P V +L FD
Sbjct: 605 GRTDAENE--PGIVKQL-SFD 622
Score = 133 (51.9 bits), Expect = 1.6e-09, Sum P(3) = 1.6e-09
Identities = 37/121 (30%), Positives = 56/121 (46%)
Query: 473 LLPTCVTRLVDFDFVQ-ASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEG 531
L TC ++V+ V+ + G T LT G++Y G HG+LG DR
Sbjct: 402 LQTTCTPKMVEIKCVKYIATGVKNTAALTEWGELYMWGINEHGELGLGDTIDRRTPTRVI 461
Query: 532 KLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVE 591
+LK E V I+ S H A T G +Y WG++ G Q +P + + DR+++
Sbjct: 462 RLKNEVVSTIACSSTHSACYTESGKMYVWGQSDE----TGKIQAIPSPLPIHSYLDREIK 517
Query: 592 S 592
S
Sbjct: 518 S 518
Score = 127 (49.8 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
Identities = 21/41 (51%), Positives = 34/41 (82%)
Query: 538 VKGISSGSYHVAVLTSGGSVYTWGKNANGQLG-LGDSQERE 577
+K ++ G+YH+ +LT GG+V+TWG N+NGQLG L D+Q+++
Sbjct: 335 IKQVALGNYHIVLLTEGGNVWTWGSNSNGQLGYLVDTQQQQ 375
Score = 93 (37.8 bits), Expect = 6.9e-11, Sum P(3) = 6.9e-11
Identities = 22/62 (35%), Positives = 36/62 (58%)
Query: 335 IYTWGHNNHGADLVGERRSRSHWLPRKL--FDTLDGVRVSKVACGEWHTAIVSTSGQLFT 392
++T+GH ++GA +G+ + P+K+ F +D RV KVACG +HT V+ L+
Sbjct: 3 VFTFGHGSNGALGLGKITDDTCPTPQKVNYFTEIDK-RVKKVACGSYHTVFVTDDEHLYI 61
Query: 393 YG 394
G
Sbjct: 62 CG 63
Score = 87 (35.7 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 15/44 (34%), Positives = 29/44 (65%)
Query: 256 LESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVN 299
LE++ + ++ ++LG H L+T+ G V+ WG +G+LG+ V+
Sbjct: 327 LENSPLNTIKQVALGNYHIVLLTEGGNVWTWGSNSNGQLGYLVD 370
Score = 85 (35.0 bits), Expect = 1.4e-09, Sum P(3) = 1.4e-09
Identities = 19/53 (35%), Positives = 31/53 (58%)
Query: 390 LFTYGDGTFGVLGHGNLQNVS--QPKEVESLRGL--KVKSVACGPWHTAAIVD 438
+FT+G G+ G LG G + + + P++V + +VK VACG +HT + D
Sbjct: 3 VFTFGHGSNGALGLGKITDDTCPTPQKVNYFTEIDKRVKKVACGSYHTVFVTD 55
Score = 76 (31.8 bits), Expect = 2.2e-10, Sum P(3) = 2.2e-10
Identities = 23/72 (31%), Positives = 34/72 (47%)
Query: 283 VFCWGEGKDGRLGHKVNMDVSCP--KLVECLSGIN--VQSVSCGEFQTCALTKSGEIYTW 338
VF +G G +G LG D +CP + V + I+ V+ V+CG + T +T +Y
Sbjct: 3 VFTFGHGSNGALGLGKITDDTCPTPQKVNYFTEIDKRVKKVACGSYHTVFVTDDEHLYIC 62
Query: 339 GHNN---HGADL 347
G HG L
Sbjct: 63 GIKKDPKHGTTL 74
Score = 71 (30.1 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 12/34 (35%), Positives = 22/34 (64%)
Query: 312 SGIN-VQSVSCGEFQTCALTKSGEIYTWGHNNHG 344
S +N ++ V+ G + LT+ G ++TWG N++G
Sbjct: 330 SPLNTIKQVALGNYHIVLLTEGGNVWTWGSNSNG 363
Score = 70 (29.7 bits), Expect = 2.2e-10, Sum P(3) = 2.2e-10
Identities = 19/82 (23%), Positives = 40/82 (48%)
Query: 352 RSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGH---GNLQN 408
R +H+L +T + +VA G +H +++ G ++T+G + G LG+ Q
Sbjct: 321 RISTHFLENSPLNT-----IKQVALGNYHIVLLTEGGNVWTWGSNSNGQLGYLVDTQQQQ 375
Query: 409 VSQPKEVESLRGLKVKSVACGP 430
Q ++ +S+ L+ + + P
Sbjct: 376 QQQLQQQQSMSSLQPSASSSSP 397
Score = 58 (25.5 bits), Expect = 6.9e-11, Sum P(3) = 6.9e-11
Identities = 15/51 (29%), Positives = 26/51 (50%)
Query: 423 VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGH-VDGERK 472
+K VA G +H + + GG ++TWG G+LG+ VD +++
Sbjct: 335 IKQVALGNYHIVLLTE-----------GGNVWTWGSNSNGQLGYLVDTQQQ 374
Score = 53 (23.7 bits), Expect = 2.2e-10, Sum P(3) = 2.2e-10
Identities = 14/30 (46%), Positives = 17/30 (56%)
Query: 488 QASCGRMLTVGLTGLGKVYTMGSAVHGQLG 517
Q + G V LT G V+T GS +GQLG
Sbjct: 337 QVALGNYHIVLLTEGGNVWTWGSNSNGQLG 366
>UNIPROTKB|F1MMV0 [details] [associations]
symbol:IBTK "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051209 "release of sequestered calcium ion into
cytosol" evidence=IEA] [GO:0030292 "protein tyrosine kinase
inhibitor activity" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 GO:GO:0051209
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS50012 GO:GO:0030292 OMA:VSALHHK
GeneTree:ENSGT00700000104160 EMBL:DAAA02025482 EMBL:DAAA02025483
IPI:IPI00708608 Ensembl:ENSBTAT00000038116 Uniprot:F1MMV0
Length = 1353
Score = 200 (75.5 bits), Expect = 8.7e-11, Sum P(2) = 8.7e-11
Identities = 80/310 (25%), Positives = 148/310 (47%)
Query: 278 TKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS--GINVQSVSCGEFQTCALTKSGEI 335
T +V+ WG+ + LGH P+LV+ S GI ++ V +F + L++ G++
Sbjct: 139 TDPTDVYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQV 198
Query: 336 YTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGD 395
YT GH G +G ++ +PR L + L G S+VA + HT +++ G ++T+G
Sbjct: 199 YTCGHGPGGR--LGHGDEQTCLVPR-LVEGLSGHNCSQVAAAKDHTVVLTEDGCVYTFGL 255
Query: 396 GTF---GVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGK 452
F G++ + NV + + + L+G + VA G +HT ++ R A+
Sbjct: 256 NIFHQLGLIPPPSSCNVPRQMQAKYLKGRTIIGVAAGRFHT-----VLWTR---EAV--- 304
Query: 453 LFTWGDADKGRLGHV---DGERKLL-PTCVTRL----VDFDFVQASCGRMLTVGLTGLGK 504
+T G + G+LG++ +GE+ + P V+ L + V AS G TV +T G
Sbjct: 305 -YTMG-LNGGQLGYLLDPNGEKCVTAPRQVSALHHKDITLSLVAASDGA--TVCVTTKGD 360
Query: 505 VYTMGSAVHGQLGNPKAKDRSITV----VEGKLKEEFVKGISSGSYHVAVLTSGGS--VY 558
+Y + +L + + + + V +E K+ E +K +G + +L G+ V+
Sbjct: 361 IYLLADYQCKKLASKQLNLKKVLVSGGHMEYKVDPEHLK--ENGGQKICILAMDGAGRVF 418
Query: 559 TWGKNANGQL 568
W ++ N +
Sbjct: 419 CW-RSVNSSM 427
Score = 196 (74.1 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 70/236 (29%), Positives = 110/236 (46%)
Query: 380 HTAIVSTSG-QLFTYGDGTFGVLGHGNLQNVSQPKEVE--SLRGLKVKSVACGPWHTAAI 436
H +T ++T+GD T LGHG+ + P+ V+ S G+ +K V +H+ +
Sbjct: 133 HVVFKNTDPTDVYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFL 192
Query: 437 VDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLT 496
G+++T G GRLGH D + L+P V L + Q + + T
Sbjct: 193 SQ-----------KGQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLSGHNCSQVAAAKDHT 241
Query: 497 VGLTGLGKVYTMGSAVHGQLG--NPKAKDRSITVVEGK-LKEEFVKGISSGSYHVAVLTS 553
V LT G VYT G + QLG P + ++ K LK + G+++G +H VL +
Sbjct: 242 VVLTEDGCVYTFGLNIFHQLGLIPPPSSCNVPRQMQAKYLKGRTIIGVAAGRFHT-VLWT 300
Query: 554 GGSVYTWGKNANGQLG--LGDSQER--ETPTFVEALRDRQVESVVCGSSITAAICL 605
+VYT G N GQLG L + E+ P V AL + + + +S A +C+
Sbjct: 301 REAVYTMGLNG-GQLGYLLDPNGEKCVTAPRQVSALHHKDITLSLVAASDGATVCV 355
Score = 184 (69.8 bits), Expect = 4.3e-09, Sum P(2) = 4.3e-09
Identities = 70/242 (28%), Positives = 111/242 (45%)
Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
DV WG+ G SQN L+ S + ++ + L H+ +++
Sbjct: 143 DVYTWGDNT------NFTLGHGSQNSKHHPELVDLFSRSGIY--IKQVVLCKFHSVFLSQ 194
Query: 280 EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
+G+V+ G G GRLGH P+LVE LSG N V+ + T LT+ G +YT+G
Sbjct: 195 KGQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLSGHNCSQVAAAKDHTVVLTEDGCVYTFG 254
Query: 340 HNN-HGADLVGERRSRSHWLPRKL-FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYG--D 395
N H L+ S + +PR++ L G + VA G +HT ++ T ++T G
Sbjct: 255 LNIFHQLGLIPPPSSCN--VPRQMQAKYLKGRTIIGVAAGRFHT-VLWTREAVYTMGLNG 311
Query: 396 GTFGVLGHGNLQN-VSQPKEVESL--RGLKVKSVACGPWHTAAIV---DI--MVD-RCKS 446
G G L N + V+ P++V +L + + + VA T + DI + D +CK
Sbjct: 312 GQLGYLLDPNGEKCVTAPRQVSALHHKDITLSLVAASDGATVCVTTKGDIYLLADYQCKK 371
Query: 447 NA 448
A
Sbjct: 372 LA 373
Score = 45 (20.9 bits), Expect = 8.7e-11, Sum P(2) = 8.7e-11
Identities = 21/62 (33%), Positives = 30/62 (48%)
Query: 903 KLPKDRKVDSLCSSPIVFSNKLKSVYGRELCHDNSSGSVE--DSKVART--EPQQKGTKA 958
+L +RK + S+P SNK+ S E DN + E S A T E Q+ +K+
Sbjct: 651 RLNLNRKPEGYPSTPNCHSNKMNS---HE---DNQKSAFEAYKSNQAHTISEKQKSKSKS 704
Query: 959 SK 960
SK
Sbjct: 705 SK 706
Score = 43 (20.2 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 24/80 (30%), Positives = 37/80 (46%)
Query: 763 KSVEPTPIPKTQMSTHSPLLRKISLGSNFIPIASTVEKDLSESNKMLNEEVQRLRDQAR- 821
K P PIP ++ T S +S GS F P++ V DL + + E Q+ +
Sbjct: 1087 KITAPQPIPSNRIDTTSSS-NWVS-GS-FSPVSPPV-MDL-RTIMQIEESRQKCGTTPKT 1141
Query: 822 NLEKQCQIGNQKVQECQQKI 841
NL K G K+ + Q+K+
Sbjct: 1142 NLGKMISHG-VKLSQKQRKM 1160
>UNIPROTKB|C9JRH2 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0031965 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341 OrthoDB:EOG4320Z9
IPI:IPI00927389 ProteinModelPortal:C9JRH2 SMR:C9JRH2 STRING:C9JRH2
Ensembl:ENST00000427469 ArrayExpress:C9JRH2 Bgee:C9JRH2
Uniprot:C9JRH2
Length = 230
Score = 166 (63.5 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 53/152 (34%), Positives = 78/152 (51%)
Query: 451 GKLFTWGDADKGRLGHVDG--ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTM 508
G + T G D G+LG + ERK P V+ + D VQA G M TV L+ G+VY+
Sbjct: 35 GLVLTLGQGDVGQLGLGENVMERKK-PALVS--IPEDVVQAEAGGMHTVCLSKSGQVYSF 91
Query: 509 GSAVHGQLGNPKAKDRSITVVEGKLK-EEFVKGISSGSYHVAVLTSGGSVYTWG--KNAN 565
G G LG + + S +V GK++ +E V +S+G H A LT G V+ WG ++ N
Sbjct: 92 GCNDEGALGRDTSVEGS-EMVPGKVELQEKVVQVSAGDSHTAALTDDGRVFLWGSFRDNN 150
Query: 566 GQLGLGDSQERETPTFVEALRDRQVESVVCGS 597
G +GL + ++ V+ D V V G+
Sbjct: 151 GVIGLLEPMKKSMVP-VQVQLDVPVVKVASGN 181
Score = 162 (62.1 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 52/168 (30%), Positives = 83/168 (49%)
Query: 239 GSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKV 298
G + + ++ P L+ ++ DV G H ++K G+V+ +G +G LG
Sbjct: 46 GQLGLGENVMERKKPALV--SIPEDVVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDT 103
Query: 299 NMDVS--CPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG--HNNHGADLVGERRSR 354
+++ S P VE + VQ VS G+ T ALT G ++ WG +N+G + E +
Sbjct: 104 SVEGSEMVPGKVELQEKV-VQ-VSAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLEPMKK 161
Query: 355 SHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLG 402
S +P ++ LD V V KVA G H +++ G L+T G G G LG
Sbjct: 162 S-MVPVQV--QLD-VPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLG 205
Score = 152 (58.6 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 60/197 (30%), Positives = 96/197 (48%)
Query: 380 HTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLK--VKSVACGPWHTAAIV 437
H + + G + T G G G LG G +NV + K+ +L + V G HT
Sbjct: 27 HRSHSTEPGLVLTLGQGDVGQLGLG--ENVMERKK-PALVSIPEDVVQAEAGGMHTV--- 80
Query: 438 DIMVDRCKSNAIGGKLFTWGDADKGRLGH---VDGERKLLPTCVTRLVDFDFVQASCGRM 494
C S + G+++++G D+G LG V+G +++P V + VQ S G
Sbjct: 81 ------CLSKS--GQVYSFGCNDEGALGRDTSVEGS-EMVPGKVE--LQEKVVQVSAGDS 129
Query: 495 LTVGLTGLGKVYTMGSAV--HGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLT 552
T LT G+V+ GS +G +G + +S+ V+ +L VK ++SG+ H+ +LT
Sbjct: 130 HTAALTDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDVPVVK-VASGNDHLVMLT 188
Query: 553 SGGSVYTWGKNANGQLG 569
+ G +YT G GQLG
Sbjct: 189 ADGDLYTLGCGEQGQLG 205
Score = 149 (57.5 bits), Expect = 7.9e-08, P = 7.9e-08
Identities = 69/223 (30%), Positives = 107/223 (47%)
Query: 273 HAALVTKEGEVFCWGEGKDGRLGHKVN-MDVSCPKLVECLSGINVQSVSCGEFQTCALTK 331
H + T+ G V G+G G+LG N M+ P LV + VQ+ G T L+K
Sbjct: 27 HRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDV-VQA-EAGGMHTVCLSK 84
Query: 332 SGEIYTWGHNNHGADLVGERRS--RSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQ 389
SG++Y++G N+ GA +G S S +P K+ + + +V +V+ G+ HTA ++ G+
Sbjct: 85 SGQVYSFGCNDEGA--LGRDTSVEGSEMVPGKV-ELQE--KVVQVSAGDSHTAALTDDGR 139
Query: 390 LFTYGD--GTFGVLGHGNLQNVSQ-PKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
+F +G GV+G S P +V+ + V VA G H +V + D
Sbjct: 140 VFLWGSFRDNNGVIGLLEPMKKSMVPVQVQL--DVPVVKVASGNDH---LVMLTAD---- 190
Query: 447 NAIGGKLFTWGDADKGRLGHV----------DG-ERKLLPTCV 478
G L+T G ++G+LG V G ER L+P CV
Sbjct: 191 ----GDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCV 229
Score = 140 (54.3 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 48/152 (31%), Positives = 72/152 (47%)
Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQ--PKEVESLRGLKVKSVAC 428
V + G HT +S SGQ++++G G LG S+ P +VE KV V+
Sbjct: 69 VVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQE--KVVQVSA 126
Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA--DKGRLGHVDGERK-LLPTCVTRLVDFD 485
G HTAA+ D G++F WG + G +G ++ +K ++P V +D
Sbjct: 127 GDSHTAALTD-----------DGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQ--LDVP 173
Query: 486 FVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG 517
V+ + G V LT G +YT+G GQLG
Sbjct: 174 VVKVASGNDHLVMLTADGDLYTLGCGEQGQLG 205
>MGI|MGI:1918677 [details] [associations]
symbol:Ibtk "inhibitor of Bruton agammaglobulinemia tyrosine
kinase" species:10090 "Mus musculus" [GO:0001933 "negative
regulation of protein phosphorylation" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0016020 "membrane" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=ISO] [GO:0030292
"protein tyrosine kinase inhibitor activity" evidence=ISO]
[GO:0051209 "release of sequestered calcium ion into cytosol"
evidence=ISO] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=ISO] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 MGI:MGI:1918677
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
GO:GO:0016020 GO:GO:0051209 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 EMBL:CH466522
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GO:GO:0030292 CTD:25998 HOVERGEN:HBG081779 OMA:VSALHHK
OrthoDB:EOG4J6RQ1 ChiTaRS:IBTK EMBL:BC137798 EMBL:AK030895
EMBL:AK077387 EMBL:AK129353 IPI:IPI00660767 IPI:IPI00750982
RefSeq:NP_001074751.1 UniGene:Mm.22315 UniGene:Mm.487092
ProteinModelPortal:Q6ZPR6 SMR:Q6ZPR6 PhosphoSite:Q6ZPR6
PaxDb:Q6ZPR6 PRIDE:Q6ZPR6 Ensembl:ENSMUST00000039213 GeneID:108837
KEGG:mmu:108837 GeneTree:ENSGT00700000104160 HOGENOM:HOG000090207
InParanoid:Q6ZPR6 NextBio:361375 Bgee:Q6ZPR6 Genevestigator:Q6ZPR6
Uniprot:Q6ZPR6
Length = 1352
Score = 201 (75.8 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 70/226 (30%), Positives = 109/226 (48%)
Query: 389 QLFTYGDGTFGVLGHGNLQNVSQPKEVE--SLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
+++T+GD T LGHG+ + P+ ++ S G+ VK V +H+ +
Sbjct: 143 EVYTWGDNTNFTLGHGSQNSKHHPELLDLFSRSGVYVKQVVLCKFHSVFLSQ-------- 194
Query: 447 NAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVY 506
G+++T G GRLGH D + L+P V L + Q + + TV LT G VY
Sbjct: 195 ---KGQVYTCGHGRGGRLGHGDEQTCLVPRLVEGLSGHNCSQVAAAKDHTVVLTDDGCVY 251
Query: 507 TMGSAVHGQLG--NPKAKDRSITVVEGK-LKEEFVKGISSGSYHVAVLTSGGSVYTWGKN 563
T G + QLG P A ++ K LK + G+++G +H VL + +VYT G N
Sbjct: 252 TFGLNMFHQLGIIPPPASCNVPRQIQAKYLKGRTIIGVAAGRFHT-VLWTREAVYTLGLN 310
Query: 564 ANGQLG--LGDSQER--ETPTFVEALRDRQVESVVCGSSITAAICL 605
GQLG L + E+ TP V AL + + + +S A +C+
Sbjct: 311 G-GQLGHLLDPNGEKCVTTPRQVSALHHKDIAVSLVAASDGATVCV 355
Score = 192 (72.6 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 79/302 (26%), Positives = 141/302 (46%)
Query: 278 TKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS--GINVQSVSCGEFQTCALTKSGEI 335
T EV+ WG+ + LGH P+L++ S G+ V+ V +F + L++ G++
Sbjct: 139 TDPTEVYTWGDNTNFTLGHGSQNSKHHPELLDLFSRSGVYVKQVVLCKFHSVFLSQKGQV 198
Query: 336 YTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGD 395
YT GH G +G ++ +PR L + L G S+VA + HT +++ G ++T+G
Sbjct: 199 YTCGHGRGGR--LGHGDEQTCLVPR-LVEGLSGHNCSQVAAAKDHTVVLTDDGCVYTFGL 255
Query: 396 GTF---GVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGK 452
F G++ NV + + + L+G + VA G +HT ++ R A+
Sbjct: 256 NMFHQLGIIPPPASCNVPRQIQAKYLKGRTIIGVAAGRFHT-----VLWTR---EAV--- 304
Query: 453 LFTWGDADKGRLGHV---DGERKLL-PTCVTRL----VDFDFVQASCGRMLTVGLTGLGK 504
+T G + G+LGH+ +GE+ + P V+ L + V AS G TV +T G
Sbjct: 305 -YTLG-LNGGQLGHLLDPNGEKCVTTPRQVSALHHKDIAVSLVAASDGA--TVCVTTRGD 360
Query: 505 VYTMGSAVHGQLGNPKAKDRSITV----VEGKLKEEFVKGISSGSYHVAVLTSGGS--VY 558
+Y + ++ + + + V +E K+ E + +G + VL G+ V+
Sbjct: 361 IYLLADYQCKKMATKQLNLKKVLVSGGCMEYKVDPEHLT--ENGGQKICVLAMDGAGRVF 418
Query: 559 TW 560
W
Sbjct: 419 CW 420
Score = 191 (72.3 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 73/233 (31%), Positives = 111/233 (47%)
Query: 231 GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
GD G SQN LL S V V+ + L H+ ++++G+V+ G G+
Sbjct: 148 GDNTNFTLGHGSQNSKHHPELLDLFSRSGVY--VKQVVLCKFHSVFLSQKGQVYTCGHGR 205
Query: 291 DGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN-HGADLVG 349
GRLGH P+LVE LSG N V+ + T LT G +YT+G N H ++
Sbjct: 206 GGRLGHGDEQTCLVPRLVEGLSGHNCSQVAAAKDHTVVLTDDGCVYTFGLNMFHQLGIIP 265
Query: 350 ERRSRSHWLPRKL-FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYG-DGTFGVLGH---G 404
S + +PR++ L G + VA G +HT ++ T ++T G +G G LGH
Sbjct: 266 PPASCN--VPRQIQAKYLKGRTIIGVAAGRFHT-VLWTREAVYTLGLNG--GQLGHLLDP 320
Query: 405 NLQN-VSQPKEVESL--RGLKVKSVACGPWHTAAIV---DI--MVD-RCKSNA 448
N + V+ P++V +L + + V VA T + DI + D +CK A
Sbjct: 321 NGEKCVTTPRQVSALHHKDIAVSLVAASDGATVCVTTRGDIYLLADYQCKKMA 373
Score = 41 (19.5 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 22/77 (28%), Positives = 35/77 (45%)
Query: 894 LDTDKHPEVKLPKDRKVDSLCSSPIVFSNKLKSVYGRELCHDNSSGSVEDSKVARTEPQQ 953
L TD+ +K + + VD +CS +V +++L +E+C +VA TE
Sbjct: 828 LYTDEAVVIK--ESQNVDFVCSV-LVVADQLLITRLKEIC-----------EVALTENLT 873
Query: 954 KGTKASKLEYAEQYEPG 970
A LE+A Y G
Sbjct: 874 LKNAAMLLEFAALYNAG 890
>UNIPROTKB|F1NXV1 [details] [associations]
symbol:IBTK "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0030292 "protein tyrosine kinase inhibitor activity"
evidence=IEA] [GO:0051209 "release of sequestered calcium ion into
cytosol" evidence=IEA] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088 PROSITE:PS50097
SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005737 GO:GO:0051209 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 GO:GO:0030292 OMA:VSALHHK
GeneTree:ENSGT00700000104160 EMBL:AADN02002424 EMBL:AADN02002425
IPI:IPI00590269 Ensembl:ENSGALT00000025575 Uniprot:F1NXV1
Length = 1359
Score = 189 (71.6 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 70/226 (30%), Positives = 107/226 (47%)
Query: 389 QLFTYGDGTFGVLGHGNLQNVSQPKEVESL--RGLKVKSVACGPWHTAAIVDIMVDRCKS 446
+++T+G+ LGHG Q+ P+ V+ + +K V +H+ + S
Sbjct: 146 EVYTWGNNINFTLGHGGQQSKHHPELVDLFPRNSVYIKQVVLCKFHSVFL---------S 196
Query: 447 NAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVY 506
+ G+++T G GRLGH D + L+P V L Q + + TV LT G VY
Sbjct: 197 HK--GQIYTCGHGQGGRLGHGDEQTCLVPRLVEGLSSHQCSQIAAAKDHTVVLTEDGCVY 254
Query: 507 TMGSAVHGQLGN-PKAKDRSIT-VVEGK-LKEEFVKGISSGSYHVAVLTSGGSVYTWGKN 563
T G QLG P + S+ V+ K LK V G+++G +H VL + +VYT G N
Sbjct: 255 TFGLNTFHQLGILPPPANCSVPRQVQAKNLKGRMVIGVAAGRFHT-VLWTKEAVYTMGLN 313
Query: 564 ANGQLG--LGDSQER--ETPTFVEALRDRQVESVVCGSSITAAICL 605
GQLG L + E+ P V AL + V + +S A +C+
Sbjct: 314 G-GQLGYLLDPNGEKCVTAPRQVSALHHKDVSVSLVSASDGATVCV 358
Score = 178 (67.7 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 61/235 (25%), Positives = 113/235 (48%)
Query: 211 LIERKDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLG 270
++ +K L +V WG + +G G S++ ++ L P+ ++V ++ + L
Sbjct: 137 VVFKKTDLTEVYTWGNNI-NFTLGHG--GQQSKHHPELVDLFPR---NSVY--IKQVVLC 188
Query: 271 AKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALT 330
H+ ++ +G+++ G G+ GRLGH P+LVE LS ++ + T LT
Sbjct: 189 KFHSVFLSHKGQIYTCGHGQGGRLGHGDEQTCLVPRLVEGLSSHQCSQIAAAKDHTVVLT 248
Query: 331 KSGEIYTWGHNN-HGADLVGERRSRSHWLPRKL-FDTLDGVRVSKVACGEWHTAIVSTSG 388
+ G +YT+G N H ++ + S +PR++ L G V VA G +HT ++ T
Sbjct: 249 EDGCVYTFGLNTFHQLGILPPPANCS--VPRQVQAKNLKGRMVIGVAAGRFHT-VLWTKE 305
Query: 389 QLFTYG--DGTFGVLGHGNLQN-VSQPKEVESL--RGLKVKSVACGPWHTAAIVD 438
++T G G G L N + V+ P++V +L + + V V+ T + +
Sbjct: 306 AVYTMGLNGGQLGYLLDPNGEKCVTAPRQVSALHHKDVSVSLVSASDGATVCVTE 360
Score = 46 (21.3 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 16/70 (22%), Positives = 34/70 (48%)
Query: 770 IPKTQMSTHSP-LLRKISLGSNFIPIASTVEKDLSESNKMLNEEVQRLRDQARNLEKQCQ 828
+ KT P LL S GS + ++S + + K+ + E ++D+A +L +
Sbjct: 1016 LDKTNSVESLPELLTSDSEGS-YAGVSSPRDLQSPDFTKVFHPERTEMKDKACSLVMKAS 1074
Query: 829 IGNQKVQECQ 838
N++++ C+
Sbjct: 1075 QQNKEMKSCK 1084
Score = 37 (18.1 bits), Expect = 8.6e-09, Sum P(2) = 8.6e-09
Identities = 11/39 (28%), Positives = 19/39 (48%)
Query: 676 THSGRLLKQENQSPRNLLNLQGSLSEEVKEEKGALTPSR 714
+H+ L SP + S+ EE ++++ AL SR
Sbjct: 1272 SHNPWLATSPTNSPVMAPVMFASIVEEERQQEAALIRSR 1310
>UNIPROTKB|C9JMJ4 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0031965 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341 IPI:IPI00925317
ProteinModelPortal:C9JMJ4 SMR:C9JMJ4 STRING:C9JMJ4
Ensembl:ENST00000419074 ArrayExpress:C9JMJ4 Bgee:C9JMJ4
Uniprot:C9JMJ4
Length = 272
Score = 168 (64.2 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 81/266 (30%), Positives = 124/266 (46%)
Query: 273 HAALVTKEGEVFCWGEGKDGRLGHKVN-MDVSCPKLVECLSGINVQSVSCGEFQTCALTK 331
H + T+ G V G+G G+LG N M+ P LV + VQ+ G T L+K
Sbjct: 27 HRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDV-VQA-EAGGMHTVCLSK 84
Query: 332 SGEIYTWGHNNHGADLVGERRS--RSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQ 389
SG++Y++G N+ GA +G S S +P K+ + + +V +V+ G+ HTA ++ G+
Sbjct: 85 SGQVYSFGCNDEGA--LGRDTSVEGSEMVPGKV-ELQE--KVVQVSAGDSHTAALTDDGR 139
Query: 390 LFTYGD--GTFGVLGHGNLQNVSQ-PKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
+F +G GV+G S P +V+ + V VA G H +V + D
Sbjct: 140 VFLWGSFRDNNGVIGLLEPMKKSMVPVQVQL--DVPVVKVASGNDH---LVMLTAD---- 190
Query: 447 NAIGGKLFTWGDADKGRLGHV----------DG-ERKLLPTCV---TR--LVDFDFVQAS 490
G L+T G ++G+LG V G ER L+P CV +R F A
Sbjct: 191 ----GDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAF 246
Query: 491 CGRMLTVGLTGLGKVYTMGSAVHGQL 516
CG T ++ G VY G + + QL
Sbjct: 247 CGAYFTFAISHEGHVYGFGLSNYHQL 272
Score = 166 (63.5 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 53/152 (34%), Positives = 78/152 (51%)
Query: 451 GKLFTWGDADKGRLGHVDG--ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTM 508
G + T G D G+LG + ERK P V+ + D VQA G M TV L+ G+VY+
Sbjct: 35 GLVLTLGQGDVGQLGLGENVMERKK-PALVS--IPEDVVQAEAGGMHTVCLSKSGQVYSF 91
Query: 509 GSAVHGQLGNPKAKDRSITVVEGKLK-EEFVKGISSGSYHVAVLTSGGSVYTWG--KNAN 565
G G LG + + S +V GK++ +E V +S+G H A LT G V+ WG ++ N
Sbjct: 92 GCNDEGALGRDTSVEGS-EMVPGKVELQEKVVQVSAGDSHTAALTDDGRVFLWGSFRDNN 150
Query: 566 GQLGLGDSQERETPTFVEALRDRQVESVVCGS 597
G +GL + ++ V+ D V V G+
Sbjct: 151 GVIGLLEPMKKSMVP-VQVQLDVPVVKVASGN 181
Score = 162 (62.1 bits), Expect = 6.0e-09, P = 6.0e-09
Identities = 52/168 (30%), Positives = 83/168 (49%)
Query: 239 GSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKV 298
G + + ++ P L+ ++ DV G H ++K G+V+ +G +G LG
Sbjct: 46 GQLGLGENVMERKKPALV--SIPEDVVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDT 103
Query: 299 NMDVS--CPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG--HNNHGADLVGERRSR 354
+++ S P VE + VQ VS G+ T ALT G ++ WG +N+G + E +
Sbjct: 104 SVEGSEMVPGKVELQEKV-VQ-VSAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLEPMKK 161
Query: 355 SHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLG 402
S +P ++ LD V V KVA G H +++ G L+T G G G LG
Sbjct: 162 S-MVPVQV--QLD-VPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLG 205
Score = 152 (58.6 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 60/197 (30%), Positives = 96/197 (48%)
Query: 380 HTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLK--VKSVACGPWHTAAIV 437
H + + G + T G G G LG G +NV + K+ +L + V G HT
Sbjct: 27 HRSHSTEPGLVLTLGQGDVGQLGLG--ENVMERKK-PALVSIPEDVVQAEAGGMHTV--- 80
Query: 438 DIMVDRCKSNAIGGKLFTWGDADKGRLGH---VDGERKLLPTCVTRLVDFDFVQASCGRM 494
C S + G+++++G D+G LG V+G +++P V + VQ S G
Sbjct: 81 ------CLSKS--GQVYSFGCNDEGALGRDTSVEGS-EMVPGKVE--LQEKVVQVSAGDS 129
Query: 495 LTVGLTGLGKVYTMGSAV--HGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLT 552
T LT G+V+ GS +G +G + +S+ V+ +L VK ++SG+ H+ +LT
Sbjct: 130 HTAALTDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDVPVVK-VASGNDHLVMLT 188
Query: 553 SGGSVYTWGKNANGQLG 569
+ G +YT G GQLG
Sbjct: 189 ADGDLYTLGCGEQGQLG 205
Score = 140 (54.3 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 48/152 (31%), Positives = 72/152 (47%)
Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQ--PKEVESLRGLKVKSVAC 428
V + G HT +S SGQ++++G G LG S+ P +VE KV V+
Sbjct: 69 VVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQE--KVVQVSA 126
Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA--DKGRLGHVDGERK-LLPTCVTRLVDFD 485
G HTAA+ D G++F WG + G +G ++ +K ++P V +D
Sbjct: 127 GDSHTAALTD-----------DGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQ--LDVP 173
Query: 486 FVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG 517
V+ + G V LT G +YT+G GQLG
Sbjct: 174 VVKVASGNDHLVMLTADGDLYTLGCGEQGQLG 205
>UNIPROTKB|C9J3R0 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341
IPI:IPI00926548 ProteinModelPortal:C9J3R0 SMR:C9J3R0 STRING:C9J3R0
PRIDE:C9J3R0 Ensembl:ENST00000434290 ArrayExpress:C9J3R0
Bgee:C9J3R0 Uniprot:C9J3R0
Length = 273
Score = 151 (58.2 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 44/114 (38%), Positives = 61/114 (53%)
Query: 451 GKLFTWGDADKGRLGHVDG--ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTM 508
G + T G D G+LG + ERK P V+ + D VQA G M TV L+ G+VY+
Sbjct: 43 GLVLTLGQGDVGQLGLGENVMERKK-PALVS--IPEDVVQAEAGGMHTVCLSKSGQVYSF 99
Query: 509 GSAVHGQLGNPKAKDRSITVVEGKLK-EEFVKGISSGSYHVAVLTSGGSVYTWG 561
G G LG + + S +V GK++ +E V +S+G H A LT G V+ WG
Sbjct: 100 GCNDEGALGRDTSVEGS-EMVPGKVELQEKVVQVSAGDSHTAALTDDGRVFLWG 152
Score = 131 (51.2 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 51/156 (32%), Positives = 80/156 (51%)
Query: 273 HAALVTKEGEVFCWGEGKDGRLGHKVN-MDVSCPKLVECLSGINVQSVSCGEFQTCALTK 331
H + T+ G V G+G G+LG N M+ P LV + VQ+ G T L+K
Sbjct: 35 HRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDV-VQA-EAGGMHTVCLSK 92
Query: 332 SGEIYTWGHNNHGADLVGERRS--RSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQ 389
SG++Y++G N+ GA +G S S +P K+ L +V +V+ G+ HTA ++ G+
Sbjct: 93 SGQVYSFGCNDEGA--LGRDTSVEGSEMVPGKV--ELQE-KVVQVSAGDSHTAALTDDGR 147
Query: 390 LFTYGDGTFGVLGHGNLQNVSQPKEV--ESLRGLKV 423
+F +G L H + Q + KEV + L L+V
Sbjct: 148 VFLWGSFRH-CLFHTS-QRLGWGKEVWRQGLSHLRV 181
Score = 116 (45.9 bits), Expect = 6.5e-08, Sum P(2) = 6.5e-08
Identities = 38/137 (27%), Positives = 60/137 (43%)
Query: 239 GSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKV 298
G + + ++ P L+ ++ DV G H ++K G+V+ +G +G LG
Sbjct: 54 GQLGLGENVMERKKPALV--SIPEDVVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDT 111
Query: 299 NMDVS--CPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSH 356
+++ S P VE + VQ VS G+ T ALT G ++ WG H + R
Sbjct: 112 SVEGSEMVPGKVELQEKV-VQ-VSAGDSHTAALTDDGRVFLWGSFRH---CLFHTSQRLG 166
Query: 357 WLPRKLFDTLDGVRVSK 373
W L +RVSK
Sbjct: 167 WGKEVWRQGLSHLRVSK 183
Score = 90 (36.7 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 29/89 (32%), Positives = 41/89 (46%)
Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQ--PKEVESLRGLKVKSVAC 428
V + G HT +S SGQ++++G G LG S+ P +VE KV V+
Sbjct: 77 VVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQE--KVVQVSA 134
Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
G HTAA+ D G++F WG
Sbjct: 135 GDSHTAALTD-----------DGRVFLWG 152
Score = 87 (35.7 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 41/139 (29%), Positives = 63/139 (45%)
Query: 380 HTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLK--VKSVACGPWHTAAIV 437
H + + G + T G G G LG G +NV + K+ +L + V G HT
Sbjct: 35 HRSHSTEPGLVLTLGQGDVGQLGLG--ENVMERKK-PALVSIPEDVVQAEAGGMHTV--- 88
Query: 438 DIMVDRCKSNAIGGKLFTWGDADKGRLGH---VDGERKLLPTCVTRLVDFDFVQASCGRM 494
C S + G+++++G D+G LG V+G +++P V + VQ S G
Sbjct: 89 ------CLSKS--GQVYSFGCNDEGALGRDTSVEGS-EMVPGKVE--LQEKVVQVSAGDS 137
Query: 495 LTVGLTGLGKVYTMGSAVH 513
T LT G+V+ GS H
Sbjct: 138 HTAALTDDGRVFLWGSFRH 156
Score = 84 (34.6 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 513 HGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLG 569
+G +G + +S+ V+ +L VK ++SG+ H+ +LT+ G +YT G GQLG
Sbjct: 186 NGVIGLLEPMKKSMVPVQVQLDVPVVK-VASGNDHLVMLTADGDLYTLGCGEQGQLG 241
Score = 65 (27.9 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 17/37 (45%), Positives = 21/37 (56%)
Query: 366 LDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLG 402
LD V V KVA G H +++ G L+T G G G LG
Sbjct: 206 LD-VPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLG 241
Score = 63 (27.2 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 19/59 (32%), Positives = 31/59 (52%)
Query: 460 DKGRLGHVDGERK-LLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG 517
+ G +G ++ +K ++P V +D V+ + G V LT G +YT+G GQLG
Sbjct: 185 NNGVIGLLEPMKKSMVPVQVQ--LDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLG 241
>UNIPROTKB|Q83CB0 [details] [associations]
symbol:CBU_1217 "Hypothetical membrane spanning protein"
species:227377 "Coxiella burnetii RSA 493" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE016828
GenomeReviews:AE016828_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 OMA:GYIYAWG
RefSeq:NP_820212.1 ProteinModelPortal:Q83CB0 GeneID:1209121
KEGG:cbu:CBU_1217 PATRIC:17931169 HOGENOM:HOG000029001
ProtClustDB:CLSK914618 BioCyc:CBUR227377:GJ7S-1203-MONOMER
Uniprot:Q83CB0
Length = 497
Score = 175 (66.7 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 88/388 (22%), Positives = 166/388 (42%)
Query: 224 WGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNIS-LGAKHAALV-TKEG 281
WG G G + + +D+ +P++ ++ + L K +LV T++G
Sbjct: 92 WGNNYTGQLDFGNIHEMTKPARIPLDSFIPEMAPDDYVVQFASADFLSGKARSLVATRQG 151
Query: 282 EV--FCWGEGKDGR---LGHK-VNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEI 335
++ + W + R + H+ ++V+ +V+ LS + LT+ G I
Sbjct: 152 QLHEYYWERISNTRSEFIQHRHYELNVT---IVQLLSDYRHAFI---------LTEEGGI 199
Query: 336 YTWGHNNHGADLVGER--RSRSHWLPRKLFDTL--DGVRVSKVACGEWHTAIVSTSGQLF 391
Y WG N G +G+R RS+ LP+ F L G R+ ++ + + + G ++
Sbjct: 200 YGWGFNISGELGLGDRFERSQPTELPQNFFPYLLERGDRIVQLNFADRYLVARTAQGHVY 259
Query: 392 TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP-WHTAA-IVDIMVDRCKSNAI 449
+G G LG + Q+ P E+ S P WH I+ ++V + A+
Sbjct: 260 VWGFNYRGRLGLDDEQDRLHPVEL---------SWDFFPEWHPDDYIIQVVVGDRHTLAL 310
Query: 450 G--GKLFTWGDADKGRLGHVDGERK----LLP-TCVTRLVDFD--FVQASCGRMLTVGLT 500
G ++ WG G+LG D + + LLP L++ + ++ G ++ T
Sbjct: 311 TQLGYIYAWGKNSYGQLGFRDQQDRNRPALLPWNRFPGLLERNDRIIELIAGGARSLART 370
Query: 501 GLGKVYTMGSAVHGQLGNPKAKDRSITVVEG-----KLKEEFVKGISSGSYHVAVLTSGG 555
G +Y G+ G+P+ + + + E + + + + + +G H T G
Sbjct: 371 EQGFIYIWGARWLLVRGDPEFRHHPMLLTENYFPGLRRRGDHLVELIAGPDHTLARTEQG 430
Query: 556 SVYTWGKNANGQLGLGDSQERETPTFVE 583
+Y WG+N GQLGLGD + + P ++
Sbjct: 431 YIYAWGRNYYGQLGLGDRRIQRQPALLD 458
>TIGR_CMR|CBU_1217 [details] [associations]
symbol:CBU_1217 "hypothetical protein" species:227377
"Coxiella burnetii RSA 493" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] INTERPRO:IPR000408
Pfam:PF00415 EMBL:AE016828 GenomeReviews:AE016828_GR
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 OMA:GYIYAWG RefSeq:NP_820212.1
ProteinModelPortal:Q83CB0 GeneID:1209121 KEGG:cbu:CBU_1217
PATRIC:17931169 HOGENOM:HOG000029001 ProtClustDB:CLSK914618
BioCyc:CBUR227377:GJ7S-1203-MONOMER Uniprot:Q83CB0
Length = 497
Score = 175 (66.7 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 88/388 (22%), Positives = 166/388 (42%)
Query: 224 WGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNIS-LGAKHAALV-TKEG 281
WG G G + + +D+ +P++ ++ + L K +LV T++G
Sbjct: 92 WGNNYTGQLDFGNIHEMTKPARIPLDSFIPEMAPDDYVVQFASADFLSGKARSLVATRQG 151
Query: 282 EV--FCWGEGKDGR---LGHK-VNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEI 335
++ + W + R + H+ ++V+ +V+ LS + LT+ G I
Sbjct: 152 QLHEYYWERISNTRSEFIQHRHYELNVT---IVQLLSDYRHAFI---------LTEEGGI 199
Query: 336 YTWGHNNHGADLVGER--RSRSHWLPRKLFDTL--DGVRVSKVACGEWHTAIVSTSGQLF 391
Y WG N G +G+R RS+ LP+ F L G R+ ++ + + + G ++
Sbjct: 200 YGWGFNISGELGLGDRFERSQPTELPQNFFPYLLERGDRIVQLNFADRYLVARTAQGHVY 259
Query: 392 TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP-WHTAA-IVDIMVDRCKSNAI 449
+G G LG + Q+ P E+ S P WH I+ ++V + A+
Sbjct: 260 VWGFNYRGRLGLDDEQDRLHPVEL---------SWDFFPEWHPDDYIIQVVVGDRHTLAL 310
Query: 450 G--GKLFTWGDADKGRLGHVDGERK----LLP-TCVTRLVDFD--FVQASCGRMLTVGLT 500
G ++ WG G+LG D + + LLP L++ + ++ G ++ T
Sbjct: 311 TQLGYIYAWGKNSYGQLGFRDQQDRNRPALLPWNRFPGLLERNDRIIELIAGGARSLART 370
Query: 501 GLGKVYTMGSAVHGQLGNPKAKDRSITVVEG-----KLKEEFVKGISSGSYHVAVLTSGG 555
G +Y G+ G+P+ + + + E + + + + + +G H T G
Sbjct: 371 EQGFIYIWGARWLLVRGDPEFRHHPMLLTENYFPGLRRRGDHLVELIAGPDHTLARTEQG 430
Query: 556 SVYTWGKNANGQLGLGDSQERETPTFVE 583
+Y WG+N GQLGLGD + + P ++
Sbjct: 431 YIYAWGRNYYGQLGLGDRRIQRQPALLD 458
>WB|WBGene00004304 [details] [associations]
symbol:ran-3 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0051301 "cell division" evidence=IMP] [GO:0000910
"cytokinesis" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0016246 "RNA interference" evidence=IMP] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0009792 GO:GO:0040010
GO:GO:0007067 GO:GO:0007052 GO:GO:0002119 GO:GO:0016246
GO:GO:0000910 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005085 GO:GO:0040035 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184 EMBL:Z54327
GeneTree:ENSGT00700000104160 PIR:T19483 RefSeq:NP_495753.1
ProteinModelPortal:Q18211 SMR:Q18211 IntAct:Q18211 STRING:Q18211
PaxDb:Q18211 EnsemblMetazoa:C26D10.1.1 EnsemblMetazoa:C26D10.1.2
GeneID:174332 KEGG:cel:CELE_C26D10.1 UCSC:C26D10.1 CTD:174332
WormBase:C26D10.1 HOGENOM:HOG000016067 InParanoid:Q18211
OMA:TEPNDVE NextBio:883582 Uniprot:Q18211
Length = 569
Score = 132 (51.5 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 54/224 (24%), Positives = 95/224 (42%)
Query: 191 DTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDA 250
+ + P + +LV P L I V+ GEG G G + ++ +VD
Sbjct: 124 EPKTPGRKQAKLVAPLLTYDLFAPSIIGDRVLSCGEGEALGHPGR----TTTKKPRKVD- 178
Query: 251 LLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRL-GHKVNMDVSCPKLVE 309
+ E + +Q ++ G H+A++T EGEV+ G + G + V + S + +
Sbjct: 179 ----IFEEEGLKPLQAVA-GGVHSAVLTSEGEVYMCGINEKGTVPAEGVEKEGSTDEFAK 233
Query: 310 CLSGINVQS------VSCGEFQTCALTKSGEIYTWGH--NNHGADLVGERRSRSHWLPRK 361
+++ ++ G T ALT G + WG+ N++G V + P
Sbjct: 234 VKFEEDIEKEGKIVMLAAGASFTAALTDQGSVIAWGNLRNSNGNVDVHPLLHKMQEAPVV 293
Query: 362 LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGN 405
+ ++ K+A GE H ++ G L T+GDG G LG +
Sbjct: 294 IVHQAKR-KIVKIAAGENHLVMLDEKGCLLTFGDGEMGQLGRSS 336
Score = 92 (37.4 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 40/128 (31%), Positives = 54/128 (42%)
Query: 458 DADKGRLGHVDGE-RKLLPTCVTRL-VDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQ 515
+AD G+ G + E R LP + FV G V L GKV+ MG
Sbjct: 407 EADVGQDGQDNRELRVFLPAEAPAFGAERTFVNIE-GVQHVVILGSDGKVFAMGKNTDNA 465
Query: 516 LG--NPKAKDRSITVVEGKLKE-EF---VKGISSGSYHVAVLTSGGSVYTWGKNANGQLG 569
LG N KD + ++E EF + G+S+ + G+ Y WG + GQLG
Sbjct: 466 LGLGNWTGKDDQQHWLYDTIQEIEFDSKIVGVSAKLATSIAWSEDGTAYAWGFDTTGQLG 525
Query: 570 LGDSQERE 577
LG E E
Sbjct: 526 LGLKDEDE 533
Score = 79 (32.9 bits), Expect = 4.9e-08, Sum P(2) = 4.9e-08
Identities = 18/61 (29%), Positives = 32/61 (52%)
Query: 544 GSYHVAVLTSGGSVYTWGKNANGQLGLGD--SQERETPTFVEALRDRQVESVVCGSSITA 601
G HV +L S G V+ GKN + LGLG+ ++ + + +++ + +S + G S
Sbjct: 442 GVQHVVILGSDGKVFAMGKNTDNALGLGNWTGKDDQQHWLYDTIQEIEFDSKIVGVSAKL 501
Query: 602 A 602
A
Sbjct: 502 A 502
Score = 49 (22.3 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 11/41 (26%), Positives = 18/41 (43%)
Query: 530 EGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGL 570
+GK + K + + + V G Y +G N QLG+
Sbjct: 363 KGKFFDVVAKNVFASGFWTIVHGEDGKYYAFGLNNYAQLGI 403
>UNIPROTKB|H0YEL8 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 PANTHER:PTHR22870:SF7 HGNC:HGNC:17499 EMBL:AC055860
EMBL:AC124058 EMBL:AC124078 Ensembl:ENST00000529151 Uniprot:H0YEL8
Length = 299
Score = 166 (63.5 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 49/186 (26%), Positives = 83/186 (44%)
Query: 270 GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVE--CLSGINVQSVSCGEFQTC 327
G+ H+A +T GEV+ WG K G+L ++ + P+ +E C V ++ G
Sbjct: 84 GSDHSASLTDAGEVYVWGSNKHGQLANEAAF-LPVPQKIEAHCFQNEKVTAIWSGWTHLV 142
Query: 328 ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR--------------VSK 373
A T++G+++TWG ++G L + + W K L R ++
Sbjct: 143 AQTETGKMFTWGRADYG-QLGRKLETYEGWKLEKQDSFLPCSRPPNSMPSSPHCLTGATE 201
Query: 374 VACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHT 433
V+CG H + G +++G G+ G G NV PK V++L V CG H+
Sbjct: 202 VSCGSEHNLAI-IGGVCYSWGWNEHGMCGDGTEANVWAPKPVQALLSSSGLLVGCGAGHS 260
Query: 434 AAIVDI 439
A+ +
Sbjct: 261 LALCQL 266
Score = 156 (60.0 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 60/238 (25%), Positives = 93/238 (39%)
Query: 267 ISLGAKHAALVTKEGEVFCWGEG--KDGRL---GHKVNMDVSC--PKLVECLSGINVQSV 319
I+ G +HA T G VF WG G GR G + + + P V L V
Sbjct: 22 IAAGLRHAVAATASGIVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCV 81
Query: 320 SCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL-FDTLDGVRVSKVACGE 378
G + +LT +GE+Y WG N HG L E +P+K+ +V+ + G
Sbjct: 82 LAGSDHSASLTDAGEVYVWGSNKHG-QLANEAAFLP--VPQKIEAHCFQNEKVTAIWSGW 138
Query: 379 WHTAIVSTSGQLFTYGDGTFGVLGHG--NLQNVSQPKEVESLRGLKV-KSVACGPWHTAA 435
H + +G++FT+G +G LG + K+ L + S+ P
Sbjct: 139 THLVAQTETGKMFTWGRADYGQLGRKLETYEGWKLEKQDSFLPCSRPPNSMPSSPHCLTG 198
Query: 436 IVDIMVDRCKSNAI-GGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCG 492
++ + AI GG ++WG + G G P V L+ + CG
Sbjct: 199 ATEVSCGSEHNLAIIGGVCYSWGWNEHGMCGDGTEANVWAPKPVQALLSSSGLLVGCG 256
Score = 119 (46.9 bits), Expect = 0.00061, P = 0.00061
Identities = 66/271 (24%), Positives = 100/271 (36%)
Query: 359 PRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV---LGHGNLQ----NVSQ 411
P L +V +A G H + SG +F +G G L G +
Sbjct: 7 PESCCHMLHKEKVVCIAAGLRHAVAATASGIVFQWGTGLASCGRRLCPGQTLPLFFTAKE 66
Query: 412 PKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGER 471
P V L K V G H+A++ D G+++ WG G+L +
Sbjct: 67 PSRVTGLENSKAMCVLAGSDHSASLTD-----------AGEVYVWGSNKHGQLANEAAFL 115
Query: 472 KLLPTCVTRLVDFDFVQAS-CGRMLTVGLTGLGKVYTMGSAVHGQLGNP-------KAKD 523
+ + V A G V T GK++T G A +GQLG K +
Sbjct: 116 PVPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLGRKLETYEGWKLEK 175
Query: 524 RSITVVEGKLKEEF------VKG---ISSGSYH-VAVLTSGGSVYTWGKNANGQLGLGDS 573
+ + + + G +S GS H +A++ GG Y+WG N +G G G
Sbjct: 176 QDSFLPCSRPPNSMPSSPHCLTGATEVSCGSEHNLAII--GGVCYSWGWNEHGMCGDGTE 233
Query: 574 QERETPTFVEALRDRQVESVVCGSSITAAIC 604
P V+AL V CG+ + A+C
Sbjct: 234 ANVWAPKPVQALLSSSGLLVGCGAGHSLALC 264
>UNIPROTKB|D4A2D3 [details] [associations]
symbol:Mycbp2 "Protein Mycbp2" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 RGD:1312048 INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0015630 GO:GO:0046872
GO:GO:0030424 GO:GO:0008270 GO:GO:0032880 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0021952 Gene3D:3.30.40.10
InterPro:IPR014756 InterPro:IPR013083 SUPFAM:SSF81296
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 PANTHER:PTHR12846
OrthoDB:EOG4VQ9NB GO:GO:0021785 IPI:IPI00765932
ProteinModelPortal:D4A2D3 Ensembl:ENSRNOT00000014583
ArrayExpress:D4A2D3 Uniprot:D4A2D3
Length = 4715
Score = 137 (53.3 bits), Expect = 1.4e-08, Sum P(5) = 1.4e-08
Identities = 33/97 (34%), Positives = 54/97 (55%)
Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
VR +V+CG H+ ++ +G ++T+G G G LGHG++ + P V++L G + V
Sbjct: 902 VRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQ-VTA 960
Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG 465
G HTA +V + G++FT+G KG+LG
Sbjct: 961 GSNHTAVLV-----------MDGQVFTFGSFSKGQLG 986
Score = 134 (52.2 bits), Expect = 4.7e-09, Sum P(5) = 4.7e-09
Identities = 33/83 (39%), Positives = 43/83 (51%)
Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSY 546
VQ SCG +V L G VYT G HGQLG+ R + L + +++GS
Sbjct: 905 VQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQ-VTAGSN 963
Query: 547 HVAVLTSGGSVYTWGKNANGQLG 569
H AVL G V+T+G + GQLG
Sbjct: 964 HTAVLVMDGQVFTFGSFSKGQLG 986
Score = 121 (47.7 bits), Expect = 9.2e-08, Sum P(5) = 9.2e-08
Identities = 30/83 (36%), Positives = 40/83 (48%)
Query: 541 ISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSIT 600
+S G +H VL G VYT+G +GQLG GD R PT V+AL + V GS+ T
Sbjct: 907 VSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQ-VTAGSNHT 965
Query: 601 AAICLHKSISVGDQSSCSQCRMP 623
A + + + S Q P
Sbjct: 966 AVLVMDGQVFTFGSFSKGQLGRP 988
Score = 113 (44.8 bits), Expect = 4.7e-09, Sum P(5) = 4.7e-09
Identities = 40/145 (27%), Positives = 67/145 (46%)
Query: 264 VQNISLG--AKHAALVTKEGEVFCWG---EGKDGRLGHKVNMDVSC-PKLVECLSGINVQ 317
+ + S+G HA LV ++G VF G +G+DG PK + + G V
Sbjct: 544 IVHFSVGHDGSHALLVAEDGSVFFTGSASKGEDGESAKSRRQSKPYKPKKIIKMEGKIVV 603
Query: 318 SVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
+C + ++K GE+Y +G + +D S S L L G V++VA G
Sbjct: 604 CTACNNGSSSVISKDGELYMFGKDAIYSD------SSS------LVSDLKGHFVTQVAMG 651
Query: 378 EWHTAIVSTSGQLFTYGDGTFGVLG 402
+ HT ++ +G+++T+G G G
Sbjct: 652 KAHTCVLMKNGEVWTFGVNNKGQCG 676
Score = 105 (42.0 bits), Expect = 1.4e-08, Sum P(5) = 1.4e-08
Identities = 33/114 (28%), Positives = 55/114 (48%)
Query: 231 GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
G DG ++++ Q PK + V + +++++K+GE++ +G K
Sbjct: 569 GSASKGEDGESAKSRRQSKPYKPKKIIKMEGKIVVCTACNNGSSSVISKDGELYMFG--K 626
Query: 291 DGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHG 344
D + D S LV L G V V+ G+ TC L K+GE++T+G NN G
Sbjct: 627 DA-----IYSDSS--SLVSDLKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKG 673
Score = 97 (39.2 bits), Expect = 1.9e-05, Sum P(5) = 1.9e-05
Identities = 26/69 (37%), Positives = 34/69 (49%)
Query: 451 GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
G ++T+G G+LGH D + PT V L Q + G T L G+V+T GS
Sbjct: 921 GDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPG-PSTQVTAGSNHTAVLVMDGQVFTFGS 979
Query: 511 AVHGQLGNP 519
GQLG P
Sbjct: 980 FSKGQLGRP 988
Score = 51 (23.0 bits), Expect = 4.7e-09, Sum P(5) = 4.7e-09
Identities = 19/58 (32%), Positives = 26/58 (44%)
Query: 903 KLPKDRKVDSLCSSPIVFSNKLKSVYGRELCHDNSSGSVEDSKVARTEPQQKGTKASK 960
+L DR S S P+ S KS EL NS D +V+RT QK + ++
Sbjct: 2748 QLQSDRGTVSTSSRPV--STSAKS----ELPSKNSRSVKPDGRVSRTTADQKKPRGTE 2799
Score = 50 (22.7 bits), Expect = 4.7e-09, Sum P(5) = 4.7e-09
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 831 NQKVQECQQKIEEAWSLAR 849
N V+ C+ EAWSLAR
Sbjct: 2627 NSMVEFCESDEGEAWSLAR 2645
Score = 44 (20.5 bits), Expect = 4.7e-09, Sum P(5) = 4.7e-09
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 55 ERSLDLICKDKVQAESWFL-GLRAA 78
+RS+ + K+Q + WF G++ A
Sbjct: 286 QRSVQAVLVGKIQVQDWFSNGIKKA 310
Score = 42 (19.8 bits), Expect = 9.0e-07, Sum P(5) = 9.0e-07
Identities = 30/104 (28%), Positives = 43/104 (41%)
Query: 516 LGNPKAKDRSITVVEGKLKEEF--VKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDS 573
LGN K S+T + GK E+ +K + S H+ +TS G N ++
Sbjct: 3842 LGN---KVTSMTFLTGKAVEDLCRIKQVDLDSRHIGWVTSE---LPGGDNHIIKI----- 3890
Query: 574 QERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSC 617
E + P LR RQV+ + + I S SV Q SC
Sbjct: 3891 -ELKGPE--NTLRVRQVKVLGWKDGESTKIAGQISASVAQQRSC 3931
Score = 40 (19.1 bits), Expect = 1.1e-07, Sum P(4) = 1.1e-07
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 981 GQKGLKRVRFSRRRFTEKAAERWW 1004
G L V+ S RFT+ + R W
Sbjct: 1673 GLNSLHSVKASANRFTKTSQGRSW 1696
Score = 40 (19.1 bits), Expect = 9.0e-07, Sum P(5) = 9.0e-07
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 756 FKTHCHEKSVEPTPIPKTQMSTHSP 780
F CH+ T IPK ++ H P
Sbjct: 4653 FCNACHDDFQRMTSIPKEELP-HCP 4676
Score = 38 (18.4 bits), Expect = 1.4e-06, Sum P(5) = 1.4e-06
Identities = 6/12 (50%), Positives = 8/12 (66%)
Query: 633 CYNCGLHFCSAC 644
C+ HFC+AC
Sbjct: 4647 CFGT-THFCNAC 4657
Score = 37 (18.1 bits), Expect = 2.1e-07, Sum P(4) = 2.1e-07
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 1005 EENQVVVYQKYGIEEYSNLNQ 1025
EE Q V+ + Y E+YS +N+
Sbjct: 1179 EETQAVM-KVYSKEDYSIVNR 1198
Score = 37 (18.1 bits), Expect = 2.7e-06, Sum P(5) = 2.7e-06
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 462 GRLGHVDGERKLLPTC 477
GR DG++K +P C
Sbjct: 4283 GRWMGKDGQQKQMPMC 4298
>ZFIN|ZDB-GENE-030616-132 [details] [associations]
symbol:mycbp2 "MYC binding protein 2" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0021986 "habenula
development" evidence=IMP] [GO:0016198 "axon choice point
recognition" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0007411 "axon guidance" evidence=IMP] [GO:0031290 "retinal
ganglion cell axon guidance" evidence=IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0042068 "regulation of pteridine
metabolic process" evidence=IMP] InterPro:IPR001841
InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-030616-132
GO:GO:0005737 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872
GO:GO:0008270 GO:GO:0016198 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284 GO:GO:0031290
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 PANTHER:PTHR12846
GO:GO:0021986 EMBL:BX510646 EMBL:AL840634 EMBL:CR628366
EMBL:CU138551 IPI:IPI00993071 Ensembl:ENSDART00000124901
ArrayExpress:F1QI76 Bgee:F1QI76 GO:GO:0042068 Uniprot:F1QI76
Length = 4648
Score = 135 (52.6 bits), Expect = 4.9e-09, Sum P(7) = 4.9e-09
Identities = 32/97 (32%), Positives = 55/97 (56%)
Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
+R +V+CG H+ ++ +G ++T+G G G LGHG++ + P V++L G + V
Sbjct: 925 LRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGSPTLVQALPGPSTQ-VTA 983
Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG 465
G HTA + ++D G++FT+G KG+LG
Sbjct: 984 GSNHTAVL---LMD--------GQVFTFGSFSKGQLG 1009
Score = 134 (52.2 bits), Expect = 6.1e-09, Sum P(7) = 6.1e-09
Identities = 36/84 (42%), Positives = 47/84 (55%)
Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDR-SITVVEGKLKEEFVKGISSGS 545
VQ SCG +V L G VYT G HGQLG+ R S T+V+ L + +++GS
Sbjct: 928 VQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGSPTLVQA-LPGPSTQ-VTAGS 985
Query: 546 YHVAVLTSGGSVYTWGKNANGQLG 569
H AVL G V+T+G + GQLG
Sbjct: 986 NHTAVLLMDGQVFTFGSFSKGQLG 1009
Score = 123 (48.4 bits), Expect = 4.9e-09, Sum P(7) = 4.9e-09
Identities = 36/115 (31%), Positives = 58/115 (50%)
Query: 231 GDIGGAVDGSVSQNKTQVDALLPK-LLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEG 289
G DG ++++ Q PK +++ + V +++VTK+GE++ +G
Sbjct: 598 GSASKGEDGESTKSRRQPKPYKPKKMIKLETKMAVYTACNNGS-SSIVTKDGELYMFG-- 654
Query: 290 KDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHG 344
KD + D +C V L G V V+ G+ TC LTKSGE++T+G NN G
Sbjct: 655 KDA-----IYSDSTCQ--VSDLKGHFVTQVAMGKAHTCVLTKSGEVWTFGVNNKG 702
Score = 123 (48.4 bits), Expect = 7.2e-08, Sum P(7) = 7.2e-08
Identities = 30/83 (36%), Positives = 41/83 (49%)
Query: 541 ISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSIT 600
+S G +H VL G VYT+G +GQLG GD R +PT V+AL + V GS+ T
Sbjct: 930 VSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGSPTLVQALPGPSTQ-VTAGSNHT 988
Query: 601 AAICLHKSISVGDQSSCSQCRMP 623
A + + + S Q P
Sbjct: 989 AVLLMDGQVFTFGSFSKGQLGRP 1011
Score = 102 (41.0 bits), Expect = 5.2e-07, Sum P(7) = 5.2e-07
Identities = 40/164 (24%), Positives = 75/164 (45%)
Query: 264 VQNISLG--AKHAALVTKEGEVFCWG---EGKDGRL--GHKVNMDVSCPKLVECLSGINV 316
+ S+G HA LV ++G VF G +G+DG + K+++ + + V
Sbjct: 573 IVQFSVGHDGSHALLVAEDGSVFFTGSASKGEDGESTKSRRQPKPYKPKKMIKLETKMAV 632
Query: 317 QSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC 376
+ +C + +TK GE+Y +G + +D + L G V++VA
Sbjct: 633 YT-ACNNGSSSIVTKDGELYMFGKDAIYSDSTCQ------------VSDLKGHFVTQVAM 679
Query: 377 GEWHTAIVSTSGQLFTYGDGTFGVLGH--GNLQNVSQPKEVESL 418
G+ HT +++ SG+++T+G G G G + + VE++
Sbjct: 680 GKAHTCVLTKSGEVWTFGVNNKGQCGRDTGAMSQAGKAFGVENM 723
Score = 98 (39.6 bits), Expect = 1.4e-05, Sum P(7) = 1.4e-05
Identities = 31/99 (31%), Positives = 45/99 (45%)
Query: 421 LKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTR 480
L+ V+CG H+ +++ G ++T+G G+LGH D + PT V
Sbjct: 925 LRAVQVSCGFHHSVVLME-----------NGDVYTFGYGQHGQLGHGDVNSRGSPTLVQA 973
Query: 481 LVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNP 519
L Q + G T L G+V+T GS GQLG P
Sbjct: 974 LPG-PSTQVTAGSNHTAVLLMDGQVFTFGSFSKGQLGRP 1011
Score = 90 (36.7 bits), Expect = 6.4e-06, Sum P(7) = 6.4e-06
Identities = 55/211 (26%), Positives = 85/211 (40%)
Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVEC--LSGINVQSVSCGEF 324
I G + A + T G+++ GK LG K S K VE + S G
Sbjct: 525 IGAGREFALMKTASGKIYY--TGKYQSLGIKQG-GPSSGKWVELPVTKSPKIVQFSVGHD 581
Query: 325 QTCAL--TKSGEIYTWGHNNHGADLVGE----RRSRSHWLPRKLFDTLDGVRVSKVACGE 378
+ AL + G ++ G + G D GE RR + P+K+ L+ AC
Sbjct: 582 GSHALLVAEDGSVFFTGSASKGED--GESTKSRRQPKPYKPKKMIK-LETKMAVYTACNN 638
Query: 379 WHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVD 438
++IV+ G+L+ +G + Q V L+G V VA G HT +
Sbjct: 639 GSSSIVTKDGELYMFGKDA--IYSDSTCQ-------VSDLKGHFVTQVAMGKAHTCVLT- 688
Query: 439 IMVDRCKSNAIGGKLFTWGDADKGRLGHVDG 469
KS G+++T+G +KG+ G G
Sbjct: 689 ------KS----GEVWTFGVNNKGQCGRDTG 709
Score = 49 (22.3 bits), Expect = 4.9e-09, Sum P(7) = 4.9e-09
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 831 NQKVQECQQKIEEAWSLAR 849
N V+ C+ EAWSLAR
Sbjct: 2624 NSVVEFCESDEGEAWSLAR 2642
Score = 47 (21.6 bits), Expect = 4.9e-09, Sum P(7) = 4.9e-09
Identities = 11/39 (28%), Positives = 21/39 (53%)
Query: 19 LNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERS 57
L ++ ++ GQ+ +FQ +P PD + F ++ RS
Sbjct: 217 LQALLDMLQGQQPESFQTEP-PDVLESLFHLLLETTVRS 254
Score = 45 (20.9 bits), Expect = 5.6e-09, Sum P(6) = 5.6e-09
Identities = 15/45 (33%), Positives = 19/45 (42%)
Query: 673 QKITHSGRLLKQENQSPRNLLNLQGSLSEEVKEEKGALTPSRGQS 717
QK SGR SPR+ +L +V K L P R +S
Sbjct: 2800 QKTFTSGRSSPSSTSSPRSSSPHDKNLPAKVSPSKVHLDPPRERS 2844
Score = 43 (20.2 bits), Expect = 4.9e-09, Sum P(7) = 4.9e-09
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 55 ERSLDLICKDKVQAESWF-LGL-RAAI 79
+RS+ + K+Q + WF G+ RAA+
Sbjct: 315 QRSVQAVLVGKIQIQEWFGNGIKRAAL 341
Score = 43 (20.2 bits), Expect = 4.9e-09, Sum P(7) = 4.9e-09
Identities = 18/86 (20%), Positives = 35/86 (40%)
Query: 919 VFSNKLKSVYGRELCHDNSSGSVEDSKVARTEPQQKGTKASKLEYAEQYEPGIYITFTTL 978
VF V+G+ +C D ++ K + P+ + S + E + GI + + L
Sbjct: 3874 VFRLITSQVFGKLICGDAEPTPEQEEKNLLSSPEGEDKAPSDADLKE-HMVGIIFSRSKL 3932
Query: 979 PSGQKGL-KRVRFSRRRFTEKAAERW 1003
+ QK + + + R + E W
Sbjct: 3933 TNLQKQVCAHIVQAIRMEATRVREEW 3958
Score = 40 (19.1 bits), Expect = 4.9e-09, Sum P(7) = 4.9e-09
Identities = 10/36 (27%), Positives = 19/36 (52%)
Query: 703 VKEEKGALTPSRGQSFTSKQSRNVERKPGECLESAS 738
+K E A+ S+ +S + + ++R PG SA+
Sbjct: 2290 MKVEVKAVPVSQKKSIQQENMKKLQRLPGTSSNSAT 2325
Score = 40 (19.1 bits), Expect = 1.7e-08, Sum P(6) = 1.7e-08
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 884 EGVDANLPPKLDTDKH 899
E ++ NLP L T++H
Sbjct: 2208 EALEGNLPLHLQTNEH 2223
Score = 39 (18.8 bits), Expect = 1.3e-08, Sum P(6) = 1.3e-08
Identities = 8/25 (32%), Positives = 12/25 (48%)
Query: 756 FKTHCHEKSVEPTPIPKTQMSTHSP 780
F CH+ T +PK ++ H P
Sbjct: 4586 FCNACHDDFQRMTSVPKEELP-HCP 4609
Score = 38 (18.4 bits), Expect = 2.6e-08, Sum P(6) = 2.6e-08
Identities = 16/54 (29%), Positives = 26/54 (48%)
Query: 572 DSQERETPTFVEALRDRQVES--VVCGSSI--------TAAICLHKSISVGDQS 615
D Q +P V+A+ R+V S GSS+ + I H S+S G+++
Sbjct: 3458 DKQHSASPARVKAVPRRRVHSGDAEVGSSLLRHPSPELSRLISAHGSLSKGERN 3511
Score = 38 (18.4 bits), Expect = 7.5e-08, Sum P(6) = 7.5e-08
Identities = 6/12 (50%), Positives = 8/12 (66%)
Query: 633 CYNCGLHFCSAC 644
C+ HFC+AC
Sbjct: 4580 CFGT-THFCNAC 4590
Score = 37 (18.1 bits), Expect = 2.0e-08, Sum P(5) = 2.0e-08
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 1005 EENQVVVYQKYGIEEYSNLNQ 1025
EE Q V+ + Y E+YS +N+
Sbjct: 1202 EETQAVM-KVYSKEDYSVVNR 1221
Score = 37 (18.1 bits), Expect = 7.5e-08, Sum P(6) = 7.5e-08
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 462 GRLGHVDGERKLLPTC 477
GR DG++K +P C
Sbjct: 4216 GRWMGKDGQQKQMPMC 4231
>RGD|1312048 [details] [associations]
symbol:Mycbp2 "MYC binding protein 2, E3 ubiquitin protein
ligase" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0008045
"motor neuron axon guidance" evidence=ISO] [GO:0015630 "microtubule
cytoskeleton" evidence=ISO] [GO:0021785 "branchiomotor neuron axon
guidance" evidence=ISO] [GO:0021952 "central nervous system
projection neuron axonogenesis" evidence=ISO] [GO:0030424 "axon"
evidence=ISO] [GO:0032880 "regulation of protein localization"
evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=ISO] [GO:0048667 "cell morphogenesis involved in neuron
differentiation" evidence=ISO] [GO:0051493 "regulation of
cytoskeleton organization" evidence=ISO] InterPro:IPR027047
RGD:1312048 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 InterPro:IPR014756 SUPFAM:SSF81296 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR012983 Pfam:PF08005
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194 EMBL:CH473951
PANTHER:PTHR12846 IPI:IPI00950595 UniGene:Rn.13538
Ensembl:ENSRNOT00000064927 UCSC:RGD:1312048 Uniprot:D4A722
Length = 2667
Score = 137 (53.3 bits), Expect = 3.6e-08, Sum P(4) = 3.6e-08
Identities = 33/97 (34%), Positives = 54/97 (55%)
Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
VR +V+CG H+ ++ +G ++T+G G G LGHG++ + P V++L G + V
Sbjct: 916 VRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQ-VTA 974
Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG 465
G HTA +V + G++FT+G KG+LG
Sbjct: 975 GSNHTAVLV-----------MDGQVFTFGSFSKGQLG 1000
Score = 134 (52.2 bits), Expect = 1.2e-08, Sum P(4) = 1.2e-08
Identities = 33/83 (39%), Positives = 43/83 (51%)
Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSY 546
VQ SCG +V L G VYT G HGQLG+ R + L + +++GS
Sbjct: 919 VQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQ-VTAGSN 977
Query: 547 HVAVLTSGGSVYTWGKNANGQLG 569
H AVL G V+T+G + GQLG
Sbjct: 978 HTAVLVMDGQVFTFGSFSKGQLG 1000
Score = 121 (47.7 bits), Expect = 2.4e-07, Sum P(4) = 2.4e-07
Identities = 30/83 (36%), Positives = 40/83 (48%)
Query: 541 ISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSIT 600
+S G +H VL G VYT+G +GQLG GD R PT V+AL + V GS+ T
Sbjct: 921 VSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQ-VTAGSNHT 979
Query: 601 AAICLHKSISVGDQSSCSQCRMP 623
A + + + S Q P
Sbjct: 980 AVLVMDGQVFTFGSFSKGQLGRP 1002
Score = 113 (44.8 bits), Expect = 1.2e-08, Sum P(4) = 1.2e-08
Identities = 40/145 (27%), Positives = 67/145 (46%)
Query: 264 VQNISLG--AKHAALVTKEGEVFCWG---EGKDGRLGHKVNMDVSC-PKLVECLSGINVQ 317
+ + S+G HA LV ++G VF G +G+DG PK + + G V
Sbjct: 558 IVHFSVGHDGSHALLVAEDGSVFFTGSASKGEDGESAKSRRQSKPYKPKKIIKMEGKIVV 617
Query: 318 SVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
+C + ++K GE+Y +G + +D S S L L G V++VA G
Sbjct: 618 CTACNNGSSSVISKDGELYMFGKDAIYSD------SSS------LVSDLKGHFVTQVAMG 665
Query: 378 EWHTAIVSTSGQLFTYGDGTFGVLG 402
+ HT ++ +G+++T+G G G
Sbjct: 666 KAHTCVLMKNGEVWTFGVNNKGQCG 690
Score = 105 (42.0 bits), Expect = 3.6e-08, Sum P(4) = 3.6e-08
Identities = 33/114 (28%), Positives = 55/114 (48%)
Query: 231 GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
G DG ++++ Q PK + V + +++++K+GE++ +G K
Sbjct: 583 GSASKGEDGESAKSRRQSKPYKPKKIIKMEGKIVVCTACNNGSSSVISKDGELYMFG--K 640
Query: 291 DGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHG 344
D + D S LV L G V V+ G+ TC L K+GE++T+G NN G
Sbjct: 641 DA-----IYSDSS--SLVSDLKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKG 687
Score = 97 (39.2 bits), Expect = 5.4e-05, Sum P(4) = 5.4e-05
Identities = 26/69 (37%), Positives = 34/69 (49%)
Query: 451 GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
G ++T+G G+LGH D + PT V L Q + G T L G+V+T GS
Sbjct: 935 GDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPG-PSTQVTAGSNHTAVLVMDGQVFTFGS 993
Query: 511 AVHGQLGNP 519
GQLG P
Sbjct: 994 FSKGQLGRP 1002
Score = 44 (20.5 bits), Expect = 1.2e-08, Sum P(4) = 1.2e-08
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 55 ERSLDLICKDKVQAESWFL-GLRAA 78
+RS+ + K+Q + WF G++ A
Sbjct: 324 QRSVQAVLVGKIQVQDWFSNGIKKA 348
Score = 40 (19.1 bits), Expect = 1.2e-08, Sum P(4) = 1.2e-08
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 981 GQKGLKRVRFSRRRFTEKAAERWW 1004
G L V+ S RFT+ + R W
Sbjct: 1682 GLNSLHSVKASANRFTKTSQGRSW 1705
Score = 37 (18.1 bits), Expect = 2.3e-08, Sum P(4) = 2.3e-08
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 1005 EENQVVVYQKYGIEEYSNLNQ 1025
EE Q V+ + Y E+YS +N+
Sbjct: 1185 EETQAVM-KVYSKEDYSIVNR 1204
>TAIR|locus:2149897 [details] [associations]
symbol:BRXL4 "AT5G20540" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0010089 "xylem development" evidence=RCA]
[GO:0044036 "cell wall macromolecule metabolic process"
evidence=RCA] GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
EMBL:AF296833 HOGENOM:HOG000240563 InterPro:IPR013591 Pfam:PF08381
PROSITE:PS51514 EMBL:AK117133 IPI:IPI00532495 RefSeq:NP_197554.2
UniGene:At.49043 PaxDb:Q8GZ92 PRIDE:Q8GZ92
EnsemblPlants:AT5G20540.1 GeneID:832176 KEGG:ath:AT5G20540
TAIR:At5g20540 eggNOG:NOG313093 InParanoid:Q8GZ92 OMA:ADRSEEM
PhylomeDB:Q8GZ92 ProtClustDB:CLSN2918629 Genevestigator:Q8GZ92
Uniprot:Q8GZ92
Length = 384
Score = 168 (64.2 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 36/83 (43%), Positives = 50/83 (60%)
Query: 935 DNSSGSVEDSKVARTEPQQKGTKASKL--EYAEQYEPGIYITFTTLPSGQKGLKRVRFSR 992
D S S R+E + + AS + E+ EQ EPG+YIT LP G++ L+RVRFSR
Sbjct: 302 DASIRSSSSRDADRSE-EMSVSNASDVDNEWVEQDEPGVYITIKVLPGGKRELRRVRFSR 360
Query: 993 RRFTEKAAERWWEENQVVVYQKY 1015
RF E A WWEEN+ ++++Y
Sbjct: 361 ERFGEMHARLWWEENRARIHEQY 383
Score = 158 (60.7 bits), Expect = 5.2e-08, P = 5.2e-08
Identities = 41/137 (29%), Positives = 66/137 (48%)
Query: 893 KLDTDKHPEVKLPKDRKVDSLCSSPIVFSNKLKS--VYGREL---CHDNSSGSVEDSKVA 947
K D + K+ R S+ ++ V + + + V+G+E+ SSG +
Sbjct: 74 KSDFESDQRFKMLYGRSNSSITATAAVAATQQQQPRVWGKEMEARLKGISSGEATPKSAS 133
Query: 948 ---RTEPQQKGTKASKLEYAEQYEPGIYITFTTLPSGQKGLKRVRFSRRRFTEKAAERWW 1004
R +P + E+ Q EPG+ ITF +LP G LKR+RFSR F + A+RWW
Sbjct: 134 GRNRVDPIVFVEEKEPKEWVAQVEPGVLITFVSLPGGGNDLKRIRFSRDMFNKLQAQRWW 193
Query: 1005 EENQVVVYQKYGIEEYS 1021
+N V + Y +++ S
Sbjct: 194 ADNYDKVMELYNVQKLS 210
Score = 40 (19.1 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 266 NISLGAKHAALVTKEGEVFCWGEGKDGRL 294
N S+ A A T++ + WG+ + RL
Sbjct: 91 NSSITATAAVAATQQQQPRVWGKEMEARL 119
Score = 39 (18.8 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 10/16 (62%), Positives = 11/16 (68%)
Query: 529 VEGKLKEEFVKGISSG 544
V GK E +KGISSG
Sbjct: 110 VWGKEMEARLKGISSG 125
>TAIR|locus:2034486 [details] [associations]
symbol:BRX "BREVIS RADIX" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0015250
"water channel activity" evidence=ISS] [GO:0048364 "root
development" evidence=IMP] [GO:0042802 "identical protein binding"
evidence=IPI] [GO:0009734 "auxin mediated signaling pathway"
evidence=IMP] [GO:0009736 "cytokinin mediated signaling pathway"
evidence=IMP] [GO:0048527 "lateral root development" evidence=IMP]
[GO:0009737 "response to abscisic acid stimulus" evidence=IMP]
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0009737
GO:GO:0005634 GO:GO:0009734 EMBL:AC079041 GO:GO:0048527
GO:GO:0009736 eggNOG:NOG286599 HOGENOM:HOG000240563
ProtClustDB:CLSN2688709 InterPro:IPR013591 Pfam:PF08381
PROSITE:PS51514 EMBL:AY702648 EMBL:AY702649 EMBL:BT002854
EMBL:BT004390 IPI:IPI00541613 PIR:A86443 RefSeq:NP_174471.2
UniGene:At.40252 IntAct:Q17TI5 STRING:Q17TI5 PRIDE:Q17TI5
EnsemblPlants:AT1G31880.1 GeneID:840078 KEGG:ath:AT1G31880
TAIR:At1g31880 InParanoid:Q84JB6 OMA:NRERIQT PhylomeDB:Q17TI5
Genevestigator:Q17TI5 Uniprot:Q17TI5
Length = 344
Score = 160 (61.4 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 36/100 (36%), Positives = 55/100 (55%)
Query: 922 NKLKSVYGRELCHDNSSGSVEDSKVARTEPQQKGTKASKLEYAEQYEPGIYITFTTLPSG 981
+K S+YG +D S S + V + G K E+ Q EPG++ITF +LP+G
Sbjct: 111 SKFTSIYG----NDRESISAQSCDVVLDDD---GPK----EWMAQVEPGVHITFASLPTG 159
Query: 982 QKGLKRVRFSRRRFTEKAAERWWEENQVVVYQKYGIEEYS 1021
LKR+RFSR F + A+RWW EN + + Y ++ ++
Sbjct: 160 GNDLKRIRFSREMFDKWQAQRWWGENYDKIVELYNVQRFN 199
Score = 147 (56.8 bits), Expect = 6.6e-07, P = 6.6e-07
Identities = 27/65 (41%), Positives = 38/65 (58%)
Query: 951 PQQKGTKASKLEYAEQYEPGIYITFTTLPSGQKGLKRVRFSRRRFTEKAAERWWEENQVV 1010
P + E+ E+ EPG+YIT L G + L+RVRFSR RF E A+ WWE+N+
Sbjct: 279 PSMSNASEMQAEWIEEDEPGVYITIRQLSDGTRELRRVRFSRERFGEVHAKTWWEQNRER 338
Query: 1011 VYQKY 1015
+ +Y
Sbjct: 339 IQTQY 343
>MGI|MGI:2179432 [details] [associations]
symbol:Mycbp2 "MYC binding protein 2" species:10090 "Mus
musculus" [GO:0005515 "protein binding" evidence=IPI] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008045 "motor neuron axon
guidance" evidence=IMP] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0015630 "microtubule cytoskeleton" evidence=IDA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0021785
"branchiomotor neuron axon guidance" evidence=IMP] [GO:0021952
"central nervous system projection neuron axonogenesis"
evidence=IMP] [GO:0030424 "axon" evidence=IDA] [GO:0032880
"regulation of protein localization" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0048667 "cell morphogenesis
involved in neuron differentiation" evidence=IMP] [GO:0051493
"regulation of cytoskeleton organization" evidence=IMP]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 UniPathway:UPA00143 MGI:MGI:2179432
INTERPRO:IPR000408 Pfam:PF00415 Prosite:PS00518 GO:GO:0005634
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0015630 GO:GO:0006355
GO:GO:0046872 GO:GO:0016874 GO:GO:0030424 GO:GO:0008270
GO:GO:0032880 GO:GO:0006351 GO:GO:0016567 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0021952 Gene3D:3.30.40.10
InterPro:IPR014756 InterPro:IPR013083 SUPFAM:SSF81296
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 CleanEx:MM_PAM
InterPro:IPR004939 PROSITE:PS51284 InterPro:IPR012983 Pfam:PF08005
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194 KO:K10693
PANTHER:PTHR12846 CTD:23077 eggNOG:NOG240798 HOVERGEN:HBG053153
OrthoDB:EOG4VQ9NB ChiTaRS:MYCBP2 GO:GO:0021785 EMBL:AY325887
EMBL:BC059257 IPI:IPI00380409 IPI:IPI00608114 RefSeq:NP_997098.2
UniGene:Mm.6478 PDB:3GBW PDB:3HWJ PDBsum:3GBW PDBsum:3HWJ
ProteinModelPortal:Q7TPH6 SMR:Q7TPH6 IntAct:Q7TPH6 STRING:Q7TPH6
PhosphoSite:Q7TPH6 PaxDb:Q7TPH6 PRIDE:Q7TPH6 DNASU:105689
GeneID:105689 KEGG:mmu:105689 UCSC:uc007uwl.1 HOGENOM:HOG000112908
InParanoid:Q7TPH6 EvolutionaryTrace:Q7TPH6 NextBio:357830
CleanEx:MM_MYCBP2 Genevestigator:Q7TPH6
GermOnline:ENSMUSG00000033004 Uniprot:Q7TPH6
Length = 4711
Score = 136 (52.9 bits), Expect = 3.5e-08, Sum P(4) = 3.5e-08
Identities = 32/97 (32%), Positives = 55/97 (56%)
Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
+R +V+CG H+ ++ +G ++T+G G G LGHG++ + P V++L G + AC
Sbjct: 902 LRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQVTAC 961
Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG 465
HTA + ++D G++FT+G KG+LG
Sbjct: 962 SN-HTAVL---LMD--------GQVFTFGSFSKGQLG 986
Score = 124 (48.7 bits), Expect = 2.1e-06, Sum P(4) = 2.1e-06
Identities = 32/83 (38%), Positives = 42/83 (50%)
Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSY 546
VQ SCG +V L G VYT G HGQLG+ R + L + +++ S
Sbjct: 905 VQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQ-VTACSN 963
Query: 547 HVAVLTSGGSVYTWGKNANGQLG 569
H AVL G V+T+G + GQLG
Sbjct: 964 HTAVLLMDGQVFTFGSFSKGQLG 986
Score = 118 (46.6 bits), Expect = 8.5e-06, Sum P(4) = 8.5e-06
Identities = 29/83 (34%), Positives = 39/83 (46%)
Query: 541 ISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSIT 600
+S G +H VL G VYT+G +GQLG GD R PT V+AL + C S+ T
Sbjct: 907 VSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQVTAC-SNHT 965
Query: 601 AAICLHKSISVGDQSSCSQCRMP 623
A + + + S Q P
Sbjct: 966 AVLLMDGQVFTFGSFSKGQLGRP 988
Score = 110 (43.8 bits), Expect = 2.1e-06, Sum P(4) = 2.1e-06
Identities = 39/145 (26%), Positives = 64/145 (44%)
Query: 264 VQNISLG--AKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC----PKLVECLSGINVQ 317
+ + S+G HA LV ++G VF G G G PK + + G V
Sbjct: 544 IVHFSVGHDGSHALLVAEDGSVFFTGSASKGEDGESTKSRRQSKPYKPKKIIKMEGKIVV 603
Query: 318 SVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
+C + ++K GE+Y +G + +D S S L L G V++VA G
Sbjct: 604 YTACNNGSSSVISKDGELYMFGKDAIYSD------SSS------LVSDLKGHFVTQVAMG 651
Query: 378 EWHTAIVSTSGQLFTYGDGTFGVLG 402
+ HT ++ +G+++T+G G G
Sbjct: 652 KAHTCVLMKNGEVWTFGVNNKGQCG 676
Score = 106 (42.4 bits), Expect = 3.5e-08, Sum P(4) = 3.5e-08
Identities = 33/114 (28%), Positives = 55/114 (48%)
Query: 231 GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
G DG ++++ Q PK + V + +++++K+GE++ +G K
Sbjct: 569 GSASKGEDGESTKSRRQSKPYKPKKIIKMEGKIVVYTACNNGSSSVISKDGELYMFG--K 626
Query: 291 DGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHG 344
D + D S LV L G V V+ G+ TC L K+GE++T+G NN G
Sbjct: 627 DA-----IYSDSS--SLVSDLKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKG 673
Score = 97 (39.2 bits), Expect = 0.00059, Sum P(5) = 0.00058
Identities = 30/99 (30%), Positives = 44/99 (44%)
Query: 421 LKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTR 480
L+ V+CG H+ +++ G ++T+G G+LGH D + PT V
Sbjct: 902 LRAVQVSCGFHHSVVLME-----------NGDVYTFGYGQHGQLGHGDVNSRGCPTLVQA 950
Query: 481 LVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNP 519
L +C V L G+V+T GS GQLG P
Sbjct: 951 LPGPSTQVTACSNHTAVLLMD-GQVFTFGSFSKGQLGRP 988
Score = 50 (22.7 bits), Expect = 3.5e-08, Sum P(4) = 3.5e-08
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 831 NQKVQECQQKIEEAWSLAR 849
N V+ C+ EAWSLAR
Sbjct: 2624 NSMVEFCESDEGEAWSLAR 2642
Score = 48 (22.0 bits), Expect = 2.4e-07, Sum P(5) = 2.4e-07
Identities = 33/108 (30%), Positives = 45/108 (41%)
Query: 516 LGNPKAKDRSITVVEGKLKEEF--VKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDS 573
LGN K S+T + GK EE +K + S H+ +TS +L GD+
Sbjct: 3838 LGN---KVTSMTFLTGKAVEELCRIKQVDLDSRHIGWVTS-------------ELPGGDN 3881
Query: 574 Q----ERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSC 617
Q E + P LR RQV+ + + I S SV Q SC
Sbjct: 3882 QIIKIELKGPE--NTLRVRQVKVLGWKDGESTKIAGQISASVAQQRSC 3927
Score = 44 (20.5 bits), Expect = 3.5e-08, Sum P(4) = 3.5e-08
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 55 ERSLDLICKDKVQAESWFL-GLRAA 78
+RS+ + K+Q + WF G++ A
Sbjct: 286 QRSVQAVLVGKIQVQDWFSNGIKKA 310
Score = 40 (19.1 bits), Expect = 2.4e-07, Sum P(5) = 2.4e-07
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 756 FKTHCHEKSVEPTPIPKTQMSTHSP 780
F CH+ T IPK ++ H P
Sbjct: 4649 FCNACHDDFQRMTSIPKEELP-HCP 4672
Score = 40 (19.1 bits), Expect = 3.3e-07, Sum P(4) = 3.3e-07
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 981 GQKGLKRVRFSRRRFTEKAAERWW 1004
G L V+ S RFT+ + R W
Sbjct: 1673 GLNSLHSVKASANRFTKTSQGRSW 1696
Score = 38 (18.4 bits), Expect = 3.8e-07, Sum P(5) = 3.8e-07
Identities = 6/12 (50%), Positives = 8/12 (66%)
Query: 633 CYNCGLHFCSAC 644
C+ HFC+AC
Sbjct: 4643 CFGT-THFCNAC 4653
Score = 37 (18.1 bits), Expect = 6.4e-07, Sum P(4) = 6.4e-07
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 1005 EENQVVVYQKYGIEEYSNLNQ 1025
EE Q V+ + Y E+YS +N+
Sbjct: 1179 EETQAVM-KVYSKEDYSVVNR 1198
Score = 37 (18.1 bits), Expect = 2.7e-06, Sum P(5) = 2.7e-06
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 462 GRLGHVDGERKLLPTC 477
GR DG++K +P C
Sbjct: 4279 GRWMGKDGQQKQMPMC 4294
>UNIPROTKB|F1RP77 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051493 "regulation of cytoskeleton organization"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0032880 "regulation of protein localization"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0021952 "central
nervous system projection neuron axonogenesis" evidence=IEA]
[GO:0021785 "branchiomotor neuron axon guidance" evidence=IEA]
[GO:0015630 "microtubule cytoskeleton" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] InterPro:IPR001841
InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0015630 GO:GO:0046872 GO:GO:0030424
GO:GO:0008270 GO:GO:0032880 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0021952 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 PANTHER:PTHR12846
GO:GO:0021785 OMA:LLSILHW EMBL:CU457401 EMBL:CT978653 EMBL:CU041349
Ensembl:ENSSSCT00000010386 Uniprot:F1RP77
Length = 4460
Score = 133 (51.9 bits), Expect = 4.5e-08, Sum P(4) = 4.5e-08
Identities = 33/83 (39%), Positives = 43/83 (51%)
Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSY 546
VQ SCG +V L G VYT G HGQLG+ R + L + +++GS
Sbjct: 818 VQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQ-VTAGSN 876
Query: 547 HVAVLTSGGSVYTWGKNANGQLG 569
H AVL G V+T+G + GQLG
Sbjct: 877 HTAVLLMDGQVFTFGSFSKGQLG 899
Score = 132 (51.5 bits), Expect = 1.1e-07, Sum P(4) = 1.1e-07
Identities = 32/97 (32%), Positives = 55/97 (56%)
Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
+R +V+CG H+ ++ +G ++T+G G G LGHG++ + P V++L G + V
Sbjct: 815 LRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQ-VTA 873
Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG 465
G HTA + ++D G++FT+G KG+LG
Sbjct: 874 GSNHTAVL---LMD--------GQVFTFGSFSKGQLG 899
Score = 121 (47.7 bits), Expect = 7.2e-07, Sum P(4) = 7.2e-07
Identities = 30/83 (36%), Positives = 40/83 (48%)
Query: 541 ISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSIT 600
+S G +H VL G VYT+G +GQLG GD R PT V+AL + V GS+ T
Sbjct: 820 VSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQ-VTAGSNHT 878
Query: 601 AAICLHKSISVGDQSSCSQCRMP 623
A + + + S Q P
Sbjct: 879 AVLLMDGQVFTFGSFSKGQLGRP 901
Score = 108 (43.1 bits), Expect = 4.5e-08, Sum P(4) = 4.5e-08
Identities = 38/145 (26%), Positives = 64/145 (44%)
Query: 264 VQNISLG--AKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC----PKLVECLSGINVQ 317
+ + S+G HA LV ++G +F G G G PK + + G V
Sbjct: 457 IVHFSVGHDGSHALLVAEDGSIFFTGSASKGEDGESTKSRRQSKPYKPKKIIKMEGKIVV 516
Query: 318 SVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
+C + ++K GE+Y +G + +D S S L L G V++VA G
Sbjct: 517 YTACNNGSSSVISKDGELYMFGKDAIYSD------SSS------LVTDLKGHFVTQVAMG 564
Query: 378 EWHTAIVSTSGQLFTYGDGTFGVLG 402
+ HT ++ +G+++T+G G G
Sbjct: 565 KAHTCVLMKNGEVWTFGVNNKGQCG 589
Score = 105 (42.0 bits), Expect = 8.9e-08, Sum P(4) = 8.9e-08
Identities = 33/114 (28%), Positives = 55/114 (48%)
Query: 231 GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
G DG ++++ Q PK + V + +++++K+GE++ +G K
Sbjct: 482 GSASKGEDGESTKSRRQSKPYKPKKIIKMEGKIVVYTACNNGSSSVISKDGELYMFG--K 539
Query: 291 DGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHG 344
D + D S LV L G V V+ G+ TC L K+GE++T+G NN G
Sbjct: 540 DA-----IYSDSS--SLVTDLKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKG 586
Score = 99 (39.9 bits), Expect = 0.00010, Sum P(4) = 0.00010
Identities = 31/99 (31%), Positives = 45/99 (45%)
Query: 421 LKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTR 480
L+ V+CG H+ +++ G ++T+G G+LGH D + PT V
Sbjct: 815 LRAVQVSCGFHHSVVLME-----------NGDVYTFGYGQHGQLGHGDVNSRGCPTLVQA 863
Query: 481 LVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNP 519
L Q + G T L G+V+T GS GQLG P
Sbjct: 864 LPG-PSTQVTAGSNHTAVLLMDGQVFTFGSFSKGQLGRP 901
Score = 50 (22.7 bits), Expect = 4.5e-08, Sum P(4) = 4.5e-08
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 831 NQKVQECQQKIEEAWSLAR 849
N V+ C+ EAWSLAR
Sbjct: 2517 NSMVEFCESDEGEAWSLAR 2535
Score = 43 (20.2 bits), Expect = 4.5e-08, Sum P(4) = 4.5e-08
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 55 ERSLDLICKDKVQAESWFL-GLRAA 78
+RS+ + K+Q + WF G++ A
Sbjct: 199 QRSVQAVLVGKIQIQDWFSNGIKKA 223
Score = 40 (19.1 bits), Expect = 4.3e-07, Sum P(4) = 4.3e-07
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 981 GQKGLKRVRFSRRRFTEKAAERWW 1004
G L V+ S RFT+ + R W
Sbjct: 1589 GLNSLHSVKASANRFTKTSQGRSW 1612
Score = 40 (19.1 bits), Expect = 8.0e-06, Sum P(5) = 8.0e-06
Identities = 11/22 (50%), Positives = 14/22 (63%)
Query: 794 IASTVEKDLSESNKMLNEEVQR 815
I TV KDL + K L E+V+R
Sbjct: 4357 INHTVLKDLLDPIKELYEDVRR 4378
Score = 38 (18.4 bits), Expect = 6.6e-07, Sum P(4) = 6.6e-07
Identities = 20/86 (23%), Positives = 39/86 (45%)
Query: 761 HEKSVEPTPIPKTQMSTHSPLLRKISLGSNFIPIASTVEKDLSESN-KMLNEEV--QRLR 817
HEK + +MS H P+ K L + + E D+S + K ++ +
Sbjct: 3005 HEKCEDGKTEATFEMSVHHPMKSKSPLPLTLQHLVAFWE-DISLATIKAASQNMIFPSPG 3063
Query: 818 DQARNLEKQCQIGNQKVQECQQKIEE 843
A +K+C+ N+K ++ ++K E+
Sbjct: 3064 SCAVLKKKECEKENKKAKKEKKKKEK 3089
Score = 37 (18.1 bits), Expect = 8.3e-07, Sum P(4) = 8.3e-07
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 1005 EENQVVVYQKYGIEEYSNLNQ 1025
EE Q V+ + Y E+YS +N+
Sbjct: 1092 EETQAVM-KVYSKEDYSVVNR 1111
Score = 37 (18.1 bits), Expect = 8.0e-06, Sum P(5) = 8.0e-06
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 462 GRLGHVDGERKLLPTC 477
GR DG++K +P C
Sbjct: 4121 GRWMGKDGQQKQMPMC 4136
>TAIR|locus:2058694 [details] [associations]
symbol:BRXL1 "AT2G35600" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
EMBL:AC006068 EMBL:AC005314 EMBL:AY087525 IPI:IPI00518375
PIR:F84770 RefSeq:NP_565809.1 UniGene:At.37646 PaxDb:O82281
PRIDE:O82281 EnsemblPlants:AT2G35600.1 GeneID:818126
KEGG:ath:AT2G35600 TAIR:At2g35600 eggNOG:NOG286599
HOGENOM:HOG000240563 InParanoid:O82281 OMA:FTCINCT PhylomeDB:O82281
ProtClustDB:CLSN2688709 Genevestigator:O82281 InterPro:IPR013591
Pfam:PF08381 PROSITE:PS51514 Uniprot:O82281
Length = 331
Score = 157 (60.3 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 32/71 (45%), Positives = 46/71 (64%)
Query: 947 ARTEPQQKGTKASKL--EYAEQYEPGIYITFTTLPSGQKGLKRVRFSRRRFTEKAAERWW 1004
+R EP + AS++ E+ E+ EPG+YIT LP G + L+RVRFSR RF E A+ WW
Sbjct: 261 SRDEPPSM-SNASEMQGEWVEEDEPGVYITIRQLPDGTRELRRVRFSRERFGEVHAKTWW 319
Query: 1005 EENQVVVYQKY 1015
E+N+ + +Y
Sbjct: 320 EQNRDRIQTQY 330
Score = 155 (59.6 bits), Expect = 7.7e-08, P = 7.7e-08
Identities = 27/60 (45%), Positives = 40/60 (66%)
Query: 962 EYAEQYEPGIYITFTTLPSGQKGLKRVRFSRRRFTEKAAERWWEENQVVVYQKYGIEEYS 1021
E+ Q EPG++ITF +LPSG LKR+RFSR F + A+RWW EN + + Y ++ ++
Sbjct: 138 EWMAQVEPGVHITFVSLPSGGNDLKRIRFSREVFDKWQAQRWWGENYDRIVELYNVQRFN 197
>UNIPROTKB|E1BH40 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051493 "regulation of cytoskeleton organization"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0032880 "regulation of protein localization"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0021952 "central
nervous system projection neuron axonogenesis" evidence=IEA]
[GO:0021785 "branchiomotor neuron axon guidance" evidence=IEA]
[GO:0015630 "microtubule cytoskeleton" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] InterPro:IPR001841
InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0015630 GO:GO:0046872 GO:GO:0030424
GO:GO:0008270 GO:GO:0032880 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0021952 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 KO:K10693
PANTHER:PTHR12846 CTD:23077 GO:GO:0021785 OMA:LLSILHW
EMBL:DAAA02033607 EMBL:DAAA02033608 EMBL:DAAA02033609
EMBL:DAAA02033610 IPI:IPI00705654 RefSeq:NP_001179746.1
UniGene:Bt.105085 Ensembl:ENSBTAT00000025100 GeneID:534496
KEGG:bta:534496 NextBio:20876421 Uniprot:E1BH40
Length = 4640
Score = 136 (52.9 bits), Expect = 5.1e-08, Sum P(4) = 5.1e-08
Identities = 33/97 (34%), Positives = 56/97 (57%)
Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
+R +V+CG H+ ++ +G ++T+G G G LGHG++ + P V++L G + V
Sbjct: 902 LRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQ-VTA 960
Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG 465
G HTAA+ ++D G++FT+G KG+LG
Sbjct: 961 GSNHTAAL---LMD--------GQVFTFGSFSKGQLG 986
Score = 129 (50.5 bits), Expect = 1.3e-07, Sum P(4) = 1.3e-07
Identities = 32/83 (38%), Positives = 42/83 (50%)
Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSY 546
VQ SCG +V L G VYT G HGQLG+ R + L + +++GS
Sbjct: 905 VQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQ-VTAGSN 963
Query: 547 HVAVLTSGGSVYTWGKNANGQLG 569
H A L G V+T+G + GQLG
Sbjct: 964 HTAALLMDGQVFTFGSFSKGQLG 986
Score = 125 (49.1 bits), Expect = 3.4e-07, Sum P(4) = 3.4e-07
Identities = 31/83 (37%), Positives = 41/83 (49%)
Query: 541 ISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSIT 600
+S G +H VL G VYT+G +GQLG GD R PT V+AL + V GS+ T
Sbjct: 907 VSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQ-VTAGSNHT 965
Query: 601 AAICLHKSISVGDQSSCSQCRMP 623
AA+ + + S Q P
Sbjct: 966 AALLMDGQVFTFGSFSKGQLGRP 988
Score = 108 (43.1 bits), Expect = 1.3e-07, Sum P(4) = 1.3e-07
Identities = 38/145 (26%), Positives = 64/145 (44%)
Query: 264 VQNISLG--AKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC----PKLVECLSGINVQ 317
+ + S+G HA LV ++G +F G G G PK + + G V
Sbjct: 544 IVHFSVGHDGSHALLVAEDGSIFFTGSASKGEDGESTKSRRQSKPYKPKKIIKMEGKIVV 603
Query: 318 SVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
+C + ++K GE+Y +G + +D S S L L G V++VA G
Sbjct: 604 YTACNNGSSSVISKDGELYMFGKDAIYSD------SSS------LVTDLKGHFVTQVAMG 651
Query: 378 EWHTAIVSTSGQLFTYGDGTFGVLG 402
+ HT ++ +G+++T+G G G
Sbjct: 652 KAHTCVLMKNGEVWTFGVNNKGQCG 676
Score = 105 (42.0 bits), Expect = 5.1e-08, Sum P(4) = 5.1e-08
Identities = 33/114 (28%), Positives = 55/114 (48%)
Query: 231 GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
G DG ++++ Q PK + V + +++++K+GE++ +G K
Sbjct: 569 GSASKGEDGESTKSRRQSKPYKPKKIIKMEGKIVVYTACNNGSSSVISKDGELYMFG--K 626
Query: 291 DGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHG 344
D + D S LV L G V V+ G+ TC L K+GE++T+G NN G
Sbjct: 627 DA-----IYSDSS--SLVTDLKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKG 673
Score = 102 (41.0 bits), Expect = 6.2e-05, Sum P(4) = 6.2e-05
Identities = 31/99 (31%), Positives = 45/99 (45%)
Query: 421 LKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTR 480
L+ V+CG H+ +++ G ++T+G G+LGH D + PT V
Sbjct: 902 LRAVQVSCGFHHSVVLME-----------NGDVYTFGYGQHGQLGHGDVNSRGCPTLVQA 950
Query: 481 LVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNP 519
L Q + G T L G+V+T GS GQLG P
Sbjct: 951 LPG-PSTQVTAGSNHTAALLMDGQVFTFGSFSKGQLGRP 988
Score = 50 (22.7 bits), Expect = 5.1e-08, Sum P(4) = 5.1e-08
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 831 NQKVQECQQKIEEAWSLAR 849
N V+ C+ EAWSLAR
Sbjct: 2604 NSMVEFCESDEGEAWSLAR 2622
Score = 43 (20.2 bits), Expect = 5.1e-08, Sum P(4) = 5.1e-08
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 55 ERSLDLICKDKVQAESWFL-GLRAA 78
+RS+ + K+Q + WF G++ A
Sbjct: 286 QRSVQAVLVGKIQIQDWFSNGIKKA 310
Score = 40 (19.1 bits), Expect = 4.8e-07, Sum P(4) = 4.8e-07
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 981 GQKGLKRVRFSRRRFTEKAAERWW 1004
G L V+ S RFT+ + R W
Sbjct: 1676 GLNSLHSVKASANRFTKTSQGRSW 1699
Score = 40 (19.1 bits), Expect = 3.9e-06, Sum P(5) = 3.9e-06
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 756 FKTHCHEKSVEPTPIPKTQMSTHSP 780
F CH+ T IPK ++ H P
Sbjct: 4578 FCNACHDDFQRMTSIPKEELP-HCP 4601
Score = 38 (18.4 bits), Expect = 6.0e-06, Sum P(5) = 6.0e-06
Identities = 6/12 (50%), Positives = 8/12 (66%)
Query: 633 CYNCGLHFCSAC 644
C+ HFC+AC
Sbjct: 4572 CFGT-THFCNAC 4582
Score = 37 (18.1 bits), Expect = 9.5e-07, Sum P(4) = 9.5e-07
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 1005 EENQVVVYQKYGIEEYSNLNQ 1025
EE Q V+ + Y E+YS +N+
Sbjct: 1179 EETQAVM-KVYSKEDYSVVNR 1198
Score = 37 (18.1 bits), Expect = 3.9e-06, Sum P(5) = 3.9e-06
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 462 GRLGHVDGERKLLPTC 477
GR DG++K +P C
Sbjct: 4208 GRWMGKDGQQKQMPMC 4223
>UNIPROTKB|F1PB36 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0046872 GO:GO:0008270 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR014756 InterPro:IPR013083 SUPFAM:SSF81296
InterPro:IPR008979 SUPFAM:SSF49785 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 PANTHER:PTHR12846
EMBL:AAEX03013255 EMBL:AAEX03013256 EMBL:AAEX03013257
Ensembl:ENSCAFT00000008311 Uniprot:F1PB36
Length = 4640
Score = 133 (51.9 bits), Expect = 5.2e-08, Sum P(4) = 5.2e-08
Identities = 33/83 (39%), Positives = 43/83 (51%)
Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSY 546
VQ SCG +V L G VYT G HGQLG+ R + L + +++GS
Sbjct: 905 VQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQ-VTAGSN 963
Query: 547 HVAVLTSGGSVYTWGKNANGQLG 569
H AVL G V+T+G + GQLG
Sbjct: 964 HTAVLLMDGQVFTFGSFSKGQLG 986
Score = 132 (51.5 bits), Expect = 1.3e-07, Sum P(4) = 1.3e-07
Identities = 32/97 (32%), Positives = 55/97 (56%)
Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
+R +V+CG H+ ++ +G ++T+G G G LGHG++ + P V++L G + V
Sbjct: 902 LRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQ-VTA 960
Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG 465
G HTA + ++D G++FT+G KG+LG
Sbjct: 961 GSNHTAVL---LMD--------GQVFTFGSFSKGQLG 986
Score = 121 (47.7 bits), Expect = 8.4e-07, Sum P(4) = 8.4e-07
Identities = 30/83 (36%), Positives = 40/83 (48%)
Query: 541 ISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSIT 600
+S G +H VL G VYT+G +GQLG GD R PT V+AL + V GS+ T
Sbjct: 907 VSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQ-VTAGSNHT 965
Query: 601 AAICLHKSISVGDQSSCSQCRMP 623
A + + + S Q P
Sbjct: 966 AVLLMDGQVFTFGSFSKGQLGRP 988
Score = 108 (43.1 bits), Expect = 5.2e-08, Sum P(4) = 5.2e-08
Identities = 38/145 (26%), Positives = 64/145 (44%)
Query: 264 VQNISLG--AKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC----PKLVECLSGINVQ 317
+ + S+G HA LV ++G +F G G G PK + + G V
Sbjct: 544 IVHFSVGHDGSHALLVAEDGSIFFTGSASKGEDGESTKSRRQSKPYKPKKIIKMEGKIVV 603
Query: 318 SVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
+C + ++K GE+Y +G + +D S S L L G V++VA G
Sbjct: 604 YTACNNGSSSVISKDGELYMFGKDAIYSD------SSS------LVTDLKGHFVTQVAMG 651
Query: 378 EWHTAIVSTSGQLFTYGDGTFGVLG 402
+ HT ++ +G+++T+G G G
Sbjct: 652 KAHTCVLMKNGEVWTFGVNNKGQCG 676
Score = 105 (42.0 bits), Expect = 1.0e-07, Sum P(4) = 1.0e-07
Identities = 33/114 (28%), Positives = 55/114 (48%)
Query: 231 GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
G DG ++++ Q PK + V + +++++K+GE++ +G K
Sbjct: 569 GSASKGEDGESTKSRRQSKPYKPKKIIKMEGKIVVYTACNNGSSSVISKDGELYMFG--K 626
Query: 291 DGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHG 344
D + D S LV L G V V+ G+ TC L K+GE++T+G NN G
Sbjct: 627 DA-----IYSDSS--SLVTDLKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKG 673
Score = 99 (39.9 bits), Expect = 0.00012, Sum P(4) = 0.00012
Identities = 31/99 (31%), Positives = 45/99 (45%)
Query: 421 LKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTR 480
L+ V+CG H+ +++ G ++T+G G+LGH D + PT V
Sbjct: 902 LRAVQVSCGFHHSVVLME-----------NGDVYTFGYGQHGQLGHGDVNSRGCPTLVQA 950
Query: 481 LVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNP 519
L Q + G T L G+V+T GS GQLG P
Sbjct: 951 LPG-PSTQVTAGSNHTAVLLMDGQVFTFGSFSKGQLGRP 988
Score = 50 (22.7 bits), Expect = 5.2e-08, Sum P(4) = 5.2e-08
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 831 NQKVQECQQKIEEAWSLAR 849
N V+ C+ EAWSLAR
Sbjct: 2604 NSMVEFCESDEGEAWSLAR 2622
Score = 43 (20.2 bits), Expect = 5.2e-08, Sum P(4) = 5.2e-08
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 55 ERSLDLICKDKVQAESWFL-GLRAA 78
+RS+ + K+Q + WF G++ A
Sbjct: 286 QRSVQAVLVGKIQIQDWFSNGIKKA 310
Score = 40 (19.1 bits), Expect = 4.9e-07, Sum P(4) = 4.9e-07
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 981 GQKGLKRVRFSRRRFTEKAAERWW 1004
G L V+ S RFT+ + R W
Sbjct: 1676 GLNSLHSVKASANRFTKTSQGRSW 1699
Score = 40 (19.1 bits), Expect = 9.6e-06, Sum P(5) = 9.6e-06
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 756 FKTHCHEKSVEPTPIPKTQMSTHSP 780
F CH+ T IPK ++ H P
Sbjct: 4578 FCNACHDDFQRMTSIPKEELP-HCP 4601
Score = 38 (18.4 bits), Expect = 7.7e-07, Sum P(4) = 7.7e-07
Identities = 20/86 (23%), Positives = 39/86 (45%)
Query: 761 HEKSVEPTPIPKTQMSTHSPLLRKISLGSNFIPIASTVEKDLSESN-KMLNEEV--QRLR 817
HEK + +MS H P+ K L + + E D+S + K ++ +
Sbjct: 3092 HEKCEDGKTEATFEMSMHHPMKSKSPLPLTLQHLVAFWE-DISLATIKAASQNMIFPSPG 3150
Query: 818 DQARNLEKQCQIGNQKVQECQQKIEE 843
A +K+C+ N+K ++ ++K E+
Sbjct: 3151 SCAVLKKKECEKENKKAKKDKKKKEK 3176
Score = 38 (18.4 bits), Expect = 1.5e-05, Sum P(5) = 1.5e-05
Identities = 6/12 (50%), Positives = 8/12 (66%)
Query: 633 CYNCGLHFCSAC 644
C+ HFC+AC
Sbjct: 4572 CFGT-THFCNAC 4582
Score = 37 (18.1 bits), Expect = 9.7e-07, Sum P(4) = 9.7e-07
Identities = 8/13 (61%), Positives = 8/13 (61%)
Query: 969 PGIYITFTTLPSG 981
PGIY T PSG
Sbjct: 2550 PGIYKVVKTGPSG 2562
Score = 37 (18.1 bits), Expect = 9.7e-07, Sum P(4) = 9.7e-07
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 1005 EENQVVVYQKYGIEEYSNLNQ 1025
EE Q V+ + Y E+YS +N+
Sbjct: 1179 EETQAVM-KVYSKEDYSVVNR 1198
Score = 37 (18.1 bits), Expect = 9.6e-06, Sum P(5) = 9.6e-06
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 462 GRLGHVDGERKLLPTC 477
GR DG++K +P C
Sbjct: 4208 GRWMGKDGQQKQMPMC 4223
>UNIPROTKB|J9PB77 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0046872 GO:GO:0008270 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR014756 InterPro:IPR013083 SUPFAM:SSF81296
InterPro:IPR008979 SUPFAM:SSF49785 PROSITE:PS00626 PROSITE:PS50012
InterPro:IPR004939 PROSITE:PS51284 InterPro:IPR012983 Pfam:PF08005
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194
GeneTree:ENSGT00390000011403 PANTHER:PTHR12846 OMA:LLSILHW
EMBL:AAEX03013255 EMBL:AAEX03013256 EMBL:AAEX03013257
Ensembl:ENSCAFT00000044597 Uniprot:J9PB77
Length = 4727
Score = 133 (51.9 bits), Expect = 5.6e-08, Sum P(4) = 5.6e-08
Identities = 33/83 (39%), Positives = 43/83 (51%)
Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSY 546
VQ SCG +V L G VYT G HGQLG+ R + L + +++GS
Sbjct: 943 VQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQ-VTAGSN 1001
Query: 547 HVAVLTSGGSVYTWGKNANGQLG 569
H AVL G V+T+G + GQLG
Sbjct: 1002 HTAVLLMDGQVFTFGSFSKGQLG 1024
Score = 132 (51.5 bits), Expect = 1.4e-07, Sum P(4) = 1.4e-07
Identities = 32/97 (32%), Positives = 55/97 (56%)
Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
+R +V+CG H+ ++ +G ++T+G G G LGHG++ + P V++L G + V
Sbjct: 940 LRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQ-VTA 998
Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG 465
G HTA + ++D G++FT+G KG+LG
Sbjct: 999 GSNHTAVL---LMD--------GQVFTFGSFSKGQLG 1024
Score = 121 (47.7 bits), Expect = 9.0e-07, Sum P(4) = 9.0e-07
Identities = 30/83 (36%), Positives = 40/83 (48%)
Query: 541 ISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSIT 600
+S G +H VL G VYT+G +GQLG GD R PT V+AL + V GS+ T
Sbjct: 945 VSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQ-VTAGSNHT 1003
Query: 601 AAICLHKSISVGDQSSCSQCRMP 623
A + + + S Q P
Sbjct: 1004 AVLLMDGQVFTFGSFSKGQLGRP 1026
Score = 108 (43.1 bits), Expect = 5.6e-08, Sum P(4) = 5.6e-08
Identities = 38/145 (26%), Positives = 64/145 (44%)
Query: 264 VQNISLG--AKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC----PKLVECLSGINVQ 317
+ + S+G HA LV ++G +F G G G PK + + G V
Sbjct: 582 IVHFSVGHDGSHALLVAEDGSIFFTGSASKGEDGESTKSRRQSKPYKPKKIIKMEGKIVV 641
Query: 318 SVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
+C + ++K GE+Y +G + +D S S L L G V++VA G
Sbjct: 642 YTACNNGSSSVISKDGELYMFGKDAIYSD------SSS------LVTDLKGHFVTQVAMG 689
Query: 378 EWHTAIVSTSGQLFTYGDGTFGVLG 402
+ HT ++ +G+++T+G G G
Sbjct: 690 KAHTCVLMKNGEVWTFGVNNKGQCG 714
Score = 105 (42.0 bits), Expect = 1.1e-07, Sum P(4) = 1.1e-07
Identities = 33/114 (28%), Positives = 55/114 (48%)
Query: 231 GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
G DG ++++ Q PK + V + +++++K+GE++ +G K
Sbjct: 607 GSASKGEDGESTKSRRQSKPYKPKKIIKMEGKIVVYTACNNGSSSVISKDGELYMFG--K 664
Query: 291 DGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHG 344
D + D S LV L G V V+ G+ TC L K+GE++T+G NN G
Sbjct: 665 DA-----IYSDSS--SLVTDLKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKG 711
Score = 99 (39.9 bits), Expect = 0.00013, Sum P(4) = 0.00013
Identities = 31/99 (31%), Positives = 45/99 (45%)
Query: 421 LKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTR 480
L+ V+CG H+ +++ G ++T+G G+LGH D + PT V
Sbjct: 940 LRAVQVSCGFHHSVVLME-----------NGDVYTFGYGQHGQLGHGDVNSRGCPTLVQA 988
Query: 481 LVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNP 519
L Q + G T L G+V+T GS GQLG P
Sbjct: 989 LPG-PSTQVTAGSNHTAVLLMDGQVFTFGSFSKGQLGRP 1026
Score = 50 (22.7 bits), Expect = 5.6e-08, Sum P(4) = 5.6e-08
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 831 NQKVQECQQKIEEAWSLAR 849
N V+ C+ EAWSLAR
Sbjct: 2642 NSMVEFCESDEGEAWSLAR 2660
Score = 43 (20.2 bits), Expect = 5.6e-08, Sum P(4) = 5.6e-08
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 55 ERSLDLICKDKVQAESWFL-GLRAA 78
+RS+ + K+Q + WF G++ A
Sbjct: 324 QRSVQAVLVGKIQIQDWFSNGIKKA 348
Score = 40 (19.1 bits), Expect = 5.3e-07, Sum P(4) = 5.3e-07
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 981 GQKGLKRVRFSRRRFTEKAAERWW 1004
G L V+ S RFT+ + R W
Sbjct: 1714 GLNSLHSVKASANRFTKTSQGRSW 1737
Score = 40 (19.1 bits), Expect = 1.0e-05, Sum P(5) = 1.0e-05
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 756 FKTHCHEKSVEPTPIPKTQMSTHSP 780
F CH+ T IPK ++ H P
Sbjct: 4665 FCNACHDDFQRMTSIPKEELP-HCP 4688
Score = 38 (18.4 bits), Expect = 8.3e-07, Sum P(4) = 8.3e-07
Identities = 20/86 (23%), Positives = 39/86 (45%)
Query: 761 HEKSVEPTPIPKTQMSTHSPLLRKISLGSNFIPIASTVEKDLSESN-KMLNEEV--QRLR 817
HEK + +MS H P+ K L + + E D+S + K ++ +
Sbjct: 3182 HEKCEDGKTEATFEMSMHHPMKSKSPLPLTLQHLVAFWE-DISLATIKAASQNMIFPSPG 3240
Query: 818 DQARNLEKQCQIGNQKVQECQQKIEE 843
A +K+C+ N+K ++ ++K E+
Sbjct: 3241 SCAVLKKKECEKENKKAKKDKKKKEK 3266
Score = 38 (18.4 bits), Expect = 1.6e-05, Sum P(5) = 1.6e-05
Identities = 6/12 (50%), Positives = 8/12 (66%)
Query: 633 CYNCGLHFCSAC 644
C+ HFC+AC
Sbjct: 4659 CFGT-THFCNAC 4669
Score = 37 (18.1 bits), Expect = 1.0e-06, Sum P(4) = 1.0e-06
Identities = 8/13 (61%), Positives = 8/13 (61%)
Query: 969 PGIYITFTTLPSG 981
PGIY T PSG
Sbjct: 2588 PGIYKVVKTGPSG 2600
Score = 37 (18.1 bits), Expect = 1.0e-06, Sum P(4) = 1.0e-06
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 1005 EENQVVVYQKYGIEEYSNLNQ 1025
EE Q V+ + Y E+YS +N+
Sbjct: 1217 EETQAVM-KVYSKEDYSVVNR 1236
Score = 37 (18.1 bits), Expect = 1.0e-05, Sum P(5) = 1.0e-05
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 462 GRLGHVDGERKLLPTC 477
GR DG++K +P C
Sbjct: 4295 GRWMGKDGQQKQMPMC 4310
>TAIR|locus:2088212 [details] [associations]
symbol:ATBRXL2 "AT3G14000" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
EMBL:AB019229 HOGENOM:HOG000240563 InterPro:IPR013591 Pfam:PF08381
PROSITE:PS51514 EMBL:AK117522 EMBL:BT029002 IPI:IPI00533673
RefSeq:NP_188016.2 RefSeq:NP_974309.1 UniGene:At.39306
EnsemblPlants:AT3G14000.1 EnsemblPlants:AT3G14000.2 GeneID:820614
KEGG:ath:AT3G14000 TAIR:At3g14000 eggNOG:NOG241055
InParanoid:Q8GYL9 OMA:IETEWVE PhylomeDB:Q8GYL9
ProtClustDB:CLSN2690922 Genevestigator:Q8GYL9 Uniprot:Q8GYL9
Length = 374
Score = 157 (60.3 bits), Expect = 6.4e-08, P = 6.4e-08
Identities = 33/81 (40%), Positives = 48/81 (59%)
Query: 937 SSGSVEDSKVARTEPQQKGTKASKLE--YAEQYEPGIYITFTTLPSGQKGLKRVRFSRRR 994
SS S E+ + + + + AS +E + EQ E G+YIT LP G + L+RVRFSR +
Sbjct: 293 SSFSREEEEADHSGEELSVSNASDIETEWVEQDEAGVYITIRALPDGTRELRRVRFSREK 352
Query: 995 FTEKAAERWWEENQVVVYQKY 1015
F E A WWE+N+ + Q+Y
Sbjct: 353 FGETNARLWWEQNRARIQQQY 373
Score = 155 (59.6 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 33/100 (33%), Positives = 53/100 (53%)
Query: 922 NKLKSVYGRELCHDNSSGSVEDSKVARTEPQQKGTKASKLEYAEQYEPGIYITFTTLPSG 981
++LK E ++ SG E + E + K E+ Q EPG+ ITF +LP G
Sbjct: 111 SRLKGFLSGEGTPESMSGRTESTVFMEEEDELK-------EWVAQVEPGVLITFVSLPEG 163
Query: 982 QKGLKRVRFSRRRFTEKAAERWWEENQVVVYQKYGIEEYS 1021
+KR+RFSR F + A++WW EN V + Y +++++
Sbjct: 164 GNDMKRIRFSREMFDKWQAQKWWAENFDKVMELYNVQQFN 203
>UNIPROTKB|E9PMV6 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
PANTHER:PTHR22870:SF7 HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058
EMBL:AC124078 IPI:IPI00976302 ProteinModelPortal:E9PMV6 SMR:E9PMV6
Ensembl:ENST00000529728 ArrayExpress:E9PMV6 Bgee:E9PMV6
Uniprot:E9PMV6
Length = 229
Score = 147 (56.8 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 43/144 (29%), Positives = 64/144 (44%)
Query: 267 ISLGAKHAALVTKEGEVFCWGEG--KDGRL---GHKVNMDVSC--PKLVECLSGINVQSV 319
I+ G +HA T G VF WG G GR G + + + P V L V
Sbjct: 44 IAAGLRHAVAATASGIVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCV 103
Query: 320 SCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL-FDTLDGVRVSKVACGE 378
G + +LT +GE+Y WG N HG L E +P+K+ +V+ + G
Sbjct: 104 LAGSDHSASLTDAGEVYVWGSNKHG-QLANEAAFLP--VPQKIEAHCFQNEKVTAIWSGW 160
Query: 379 WHTAIVSTSGQLFTYGDGTFGVLG 402
H + +G++FT+G +G LG
Sbjct: 161 THLVAQTETGKMFTWGRADYGQLG 184
Score = 146 (56.5 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 61/197 (30%), Positives = 85/197 (43%)
Query: 383 IVSTSGQLFTYGDGTFGVLG--HGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIM 440
+++ +GQ+ + G +FG LG HG + V P+ +E L KV +A G H A
Sbjct: 1 MLTENGQVLSCGSNSFGQLGVPHGPRRCVV-PQAIE-LHKEKVVCIAAGLRHAVAAT--- 55
Query: 441 VDRCKSNAIGGKLFTWGD--ADKGRLGHVDGERKLLPTCV--TRLVDFDFVQASC---GR 493
G +F WG A GR L T +R+ + +A C G
Sbjct: 56 --------ASGIVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGS 107
Query: 494 MLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGK-LKEEFVKGISSGSYHVAVLT 552
+ LT G+VY GS HGQL N A +E + E V I SG H+ T
Sbjct: 108 DHSASLTDAGEVYVWGSNKHGQLANEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQT 167
Query: 553 SGGSVYTWGKNANGQLG 569
G ++TWG+ GQLG
Sbjct: 168 ETGKMFTWGRADYGQLG 184
Score = 140 (54.3 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 58/202 (28%), Positives = 86/202 (42%)
Query: 276 LVTKEGEVFCWGEGKDGRLG--HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSG 333
++T+ G+V G G+LG H V P+ +E L V ++ G A T SG
Sbjct: 1 MLTENGQVLSCGSNSFGQLGVPHGPRRCV-VPQAIE-LHKEKVVCIAAGLRHAVAATASG 58
Query: 334 EIYTWGHNNHGADLVGERRSRSHWLPRKLFDT------LDGVRVSKVAC---GEWHTAIV 384
++ WG G G R LP LF T + G+ SK C G H+A +
Sbjct: 59 IVFQWGT---GLASCGRRLCPGQTLP--LFFTAKEPSRVTGLENSKAMCVLAGSDHSASL 113
Query: 385 STSGQLFTYGDGTFGVLGH-GNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
+ +G+++ +G G L + V Q E + KV ++ G H A +
Sbjct: 114 TDAGEVYVWGSNKHGQLANEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTET---- 169
Query: 444 CKSNAIGGKLFTWGDADKGRLG 465
GK+FTWG AD G+LG
Sbjct: 170 -------GKMFTWGRADYGQLG 184
>UNIPROTKB|F1NZF2 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0015630 "microtubule cytoskeleton" evidence=IEA] [GO:0021785
"branchiomotor neuron axon guidance" evidence=IEA] [GO:0021952
"central nervous system projection neuron axonogenesis"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0032880
"regulation of protein localization" evidence=IEA] [GO:0042803
"protein homodimerization activity" evidence=IEA] [GO:0051493
"regulation of cytoskeleton organization" evidence=IEA]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0015630 GO:GO:0046872 GO:GO:0030424
GO:GO:0008270 GO:GO:0032880 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633 PROSITE:PS50012
InterPro:IPR004939 PROSITE:PS51284 InterPro:IPR012983 Pfam:PF08005
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194
GeneTree:ENSGT00390000011403 PANTHER:PTHR12846 OMA:LLSILHW
EMBL:AC149787 EMBL:AADN02042674 IPI:IPI00599046
Ensembl:ENSGALT00000027346 Uniprot:F1NZF2
Length = 4580
Score = 132 (51.5 bits), Expect = 1.3e-06, Sum P(5) = 1.3e-06
Identities = 33/97 (34%), Positives = 55/97 (56%)
Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
+R +V+CG H+ I+ +G ++T+G G G LGHG++ + P V++L G + V
Sbjct: 840 LRAVQVSCGFHHSVILMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQ-VTA 898
Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG 465
G HTA + ++D G++FT+G KG+LG
Sbjct: 899 GSNHTAIL---LMD--------GQVFTFGSFSKGQLG 924
Score = 131 (51.2 bits), Expect = 1.6e-07, Sum P(4) = 1.6e-07
Identities = 32/83 (38%), Positives = 43/83 (51%)
Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSY 546
VQ SCG +V L G VYT G HGQLG+ R + L + +++GS
Sbjct: 843 VQVSCGFHHSVILMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQ-VTAGSN 901
Query: 547 HVAVLTSGGSVYTWGKNANGQLG 569
H A+L G V+T+G + GQLG
Sbjct: 902 HTAILLMDGQVFTFGSFSKGQLG 924
Score = 119 (46.9 bits), Expect = 6.6e-06, Sum P(5) = 6.6e-06
Identities = 29/83 (34%), Positives = 40/83 (48%)
Query: 541 ISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSIT 600
+S G +H +L G VYT+G +GQLG GD R PT V+AL + V GS+ T
Sbjct: 845 VSCGFHHSVILMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQ-VTAGSNHT 903
Query: 601 AAICLHKSISVGDQSSCSQCRMP 623
A + + + S Q P
Sbjct: 904 AILLMDGQVFTFGSFSKGQLGRP 926
Score = 110 (43.8 bits), Expect = 1.6e-07, Sum P(4) = 1.6e-07
Identities = 40/152 (26%), Positives = 67/152 (44%)
Query: 273 HAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC----PKLVECLSGINVQSVSCGEFQTCA 328
HA LV +G +F G G G PK + + G V S +C +
Sbjct: 493 HALLVADDGSIFFTGSASKGEDGESTKSRRQSKPYKPKKIIKMEGKIVISTACNNGSSSV 552
Query: 329 LTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSG 388
++K GE+Y +G + +D S S L L G V++VA G+ HT ++ +G
Sbjct: 553 ISKDGELYMFGKDAIYSD------STS------LVTDLKGHFVTQVAMGKAHTCVLMKNG 600
Query: 389 QLFTYGDGTFGVLGH--GNLQNVSQPKEVESL 418
+++T+G G G G++ + VE++
Sbjct: 601 EVWTFGVNNKGQCGRDTGSMSQGGKGFGVENM 632
Score = 104 (41.7 bits), Expect = 1.3e-06, Sum P(5) = 1.3e-06
Identities = 32/114 (28%), Positives = 56/114 (49%)
Query: 231 GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
G DG ++++ Q PK + V + + +++++K+GE++ +G K
Sbjct: 507 GSASKGEDGESTKSRRQSKPYKPKKIIKMEGKIVISTACNNGSSSVISKDGELYMFG--K 564
Query: 291 DGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHG 344
D + D + LV L G V V+ G+ TC L K+GE++T+G NN G
Sbjct: 565 DA-----IYSDST--SLVTDLKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKG 611
Score = 97 (39.2 bits), Expect = 0.00079, Sum P(5) = 0.00079
Identities = 31/99 (31%), Positives = 45/99 (45%)
Query: 421 LKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTR 480
L+ V+CG H+ +++ G ++T+G G+LGH D + PT V
Sbjct: 840 LRAVQVSCGFHHSVILME-----------NGDVYTFGYGQHGQLGHGDVNSRGCPTLVQA 888
Query: 481 LVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNP 519
L Q + G T L G+V+T GS GQLG P
Sbjct: 889 LPG-PSTQVTAGSNHTAILLMDGQVFTFGSFSKGQLGRP 926
Score = 94 (38.1 bits), Expect = 1.4e-05, Sum P(5) = 1.4e-05
Identities = 55/217 (25%), Positives = 91/217 (41%)
Query: 263 DVQNISLGA--KHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVEC--LSGINVQS 318
D ++ LGA + A + T G+++ GK LG K S K VE +
Sbjct: 428 DEESAVLGAGREFALMKTASGKIYY--TGKYQSLGIKQG-GPSAGKWVELPITKSPKIIQ 484
Query: 319 VSCGEFQTCAL--TKSGEIYTWGHNNHGADLVGE----RRSRSHWLPRKLFDTLDGVRVS 372
S G + AL G I+ G + G D GE RR + P+K+ ++G V
Sbjct: 485 FSVGHDGSHALLVADDGSIFFTGSASKGED--GESTKSRRQSKPYKPKKIIK-MEGKIVI 541
Query: 373 KVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWH 432
AC ++++S G+L+ +G + + ++ V L+G V VA G H
Sbjct: 542 STACNNGSSSVISKDGELYMFGKDAI----YSDSTSL-----VTDLKGHFVTQVAMGKAH 592
Query: 433 TAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDG 469
T ++ G+++T+G +KG+ G G
Sbjct: 593 TCVLMK-----------NGEVWTFGVNNKGQCGRDTG 618
Score = 50 (22.7 bits), Expect = 4.3e-07, Sum P(5) = 4.3e-07
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 831 NQKVQECQQKIEEAWSLAR 849
N V+ C+ EAWSLAR
Sbjct: 2544 NSMVEFCESDEGEAWSLAR 2562
Score = 45 (20.9 bits), Expect = 1.6e-07, Sum P(4) = 1.6e-07
Identities = 31/117 (26%), Positives = 47/117 (40%)
Query: 909 KVDSLCSSPIVFSNKLKSVYGRELCH-DNSSGSVEDSKVA--RTEPQQKGTK-ASKL--E 962
K D C P V + + K YG ++ H N V+ V+ +T QQ+ K ++
Sbjct: 2177 KDDIRCGWPTVITVQTKDQYG-DVVHVPNMKVEVKAIPVSQKKTSLQQEQVKKVQRIPGS 2235
Query: 963 YAEQYEPGIYITFTTLPSGQKGLKRVRFSRRRFTEKAAERWWEENQVVVYQKYGIEE 1019
A P +TF LPS ++ S K A R+ + Y+ Y EE
Sbjct: 2236 PAAAASPCTDMTFGGLPS-----PKLDSSYEPMIVKEA-RYIAITMMKAYENYSFEE 2286
Score = 43 (20.2 bits), Expect = 1.6e-07, Sum P(4) = 1.6e-07
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 55 ERSLDLICKDKVQAESWFL-GLRAA 78
+RS+ + K+Q + WF G++ A
Sbjct: 224 QRSVQAVLVGKIQIQDWFSNGIKKA 248
Score = 40 (19.1 bits), Expect = 3.8e-06, Sum P(5) = 3.8e-06
Identities = 11/22 (50%), Positives = 14/22 (63%)
Query: 794 IASTVEKDLSESNKMLNEEVQR 815
I TV KDL + K L E+V+R
Sbjct: 4384 INHTVLKDLLDPIKELYEDVRR 4405
Score = 40 (19.1 bits), Expect = 3.8e-06, Sum P(5) = 3.8e-06
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 756 FKTHCHEKSVEPTPIPKTQMSTHSP 780
F CH+ T IPK ++ H P
Sbjct: 4518 FCNACHDDFQRMTSIPKEELP-HCP 4541
Score = 38 (18.4 bits), Expect = 7.5e-07, Sum P(4) = 7.5e-07
Identities = 6/12 (50%), Positives = 8/12 (66%)
Query: 633 CYNCGLHFCSAC 644
C+ HFC+AC
Sbjct: 4512 CFGT-THFCNAC 4522
Score = 38 (18.4 bits), Expect = 1.3e-06, Sum P(5) = 1.3e-06
Identities = 17/57 (29%), Positives = 22/57 (38%)
Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAAL--VTKEGEVFCWGE 288
G +G S+ +++L LLE V N S G AL V WGE
Sbjct: 135 GQQPEGLQSEPPEVLESLFQLLLEITVRSTGMNDSTGQSLTALSCACLFSLVAAWGE 191
Score = 37 (18.1 bits), Expect = 4.3e-07, Sum P(5) = 4.3e-07
Identities = 12/37 (32%), Positives = 20/37 (54%)
Query: 703 VKEEKGALTPSRGQ-SFTSKQSRNVERKPGECLESAS 738
+K E A+ S+ + S +Q + V+R PG +AS
Sbjct: 2205 MKVEVKAIPVSQKKTSLQQEQVKKVQRIPGSPAAAAS 2241
Score = 37 (18.1 bits), Expect = 9.3e-07, Sum P(4) = 9.3e-07
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 1005 EENQVVVYQKYGIEEYSNLNQ 1025
EE Q V+ + Y E+YS +N+
Sbjct: 1117 EETQAVM-KVYSKEDYSVVNR 1136
Score = 37 (18.1 bits), Expect = 1.1e-05, Sum P(5) = 1.1e-05
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 462 GRLGHVDGERKLLPTC 477
GR DG++K +P C
Sbjct: 4148 GRWMGKDGQQKQMPMC 4163
>FB|FBgn0030600 [details] [associations]
symbol:hiw "highwire" species:7227 "Drosophila melanogaster"
[GO:0008582 "regulation of synaptic growth at neuromuscular
junction" evidence=IMP;TAS] [GO:0016023 "cytoplasmic
membrane-bounded vesicle" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0007628 "adult walking behavior"
evidence=NAS] [GO:0040011 "locomotion" evidence=NAS] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0030514 "negative regulation
of BMP signaling pathway" evidence=IGI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0045886 "negative regulation of synaptic
growth at neuromuscular junction" evidence=IMP] [GO:0030509 "BMP
signaling pathway" evidence=IPI] [GO:0016567 "protein
ubiquitination" evidence=ISS] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] [GO:0006914 "autophagy" evidence=IDA]
[GO:0050808 "synapse organization" evidence=IDA] InterPro:IPR001841
InterPro:IPR027047 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415 Prosite:PS00518
GO:GO:0005886 GO:GO:0005634 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0046872 EMBL:AE014298 GO:GO:0008270 GO:GO:0006914
GO:GO:0040011 GO:GO:0050808 GO:GO:0006351 GO:GO:0016023
GO:GO:0045886 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0030509 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
GO:GO:0007628 eggNOG:COG5184 GO:GO:0030514 InterPro:IPR012983
Pfam:PF08005 InterPro:IPR017868 PROSITE:PS50194 EMBL:AF262977
EMBL:AY113376 RefSeq:NP_511159.3 UniGene:Dm.3259
ProteinModelPortal:Q9NB71 SMR:Q9NB71 IntAct:Q9NB71 STRING:Q9NB71
EnsemblMetazoa:FBtr0073970 GeneID:32429 KEGG:dme:Dmel_CG32592
UCSC:CG32592-RA CTD:32429 FlyBase:FBgn0030600
GeneTree:ENSGT00390000011403 InParanoid:Q9NB71 KO:K10693
OMA:DAQCQEY OrthoDB:EOG4ZPC91 PhylomeDB:Q9NB71 ChiTaRS:hiw
GenomeRNAi:32429 NextBio:778423 Bgee:Q9NB71 GermOnline:CG32592
PANTHER:PTHR12846 Uniprot:Q9NB71
Length = 5233
Score = 142 (55.0 bits), Expect = 1.9e-07, Sum P(4) = 1.9e-07
Identities = 46/130 (35%), Positives = 63/130 (48%)
Query: 445 KSNAIGGKLFTWGDADKGRLGHVDGER--KLLPTCVTRLVDFDFVQASCGRMLTVGLTGL 502
++ A GG T D DK D R L P + VQ +CG TV LT
Sbjct: 931 ETGAAGGGAATPTDLDK------DPPRVAPLAPQLLQLTSSSPVVQVACGLHHTVVLTLA 984
Query: 503 GKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEF---VKGISSGSYHVAVLTSGGSVYT 559
G+VYT GS +GQLG+ + V G ++ + + +++GS H +LTS G VYT
Sbjct: 985 GEVYTFGSNQYGQLGSG-----DLQPVSGPVRVQVPGAISQVAAGSNHTVLLTSKGMVYT 1039
Query: 560 WGKNANGQLG 569
+G GQLG
Sbjct: 1040 FGNYQKGQLG 1049
Score = 141 (54.7 bits), Expect = 0.00013, Sum P(5) = 0.00013
Identities = 35/105 (33%), Positives = 57/105 (54%)
Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
V +VACG HT +++ +G+++T+G +G LG G+LQ VS P V+ + G + VA G
Sbjct: 968 VVQVACGLHHTVVLTLAGEVYTFGSNQYGQLGSGDLQPVSGPVRVQ-VPGA-ISQVAAGS 1025
Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLP 475
HT + G ++T+G+ KG+LG + + L P
Sbjct: 1026 NHTVLLTS-----------KGMVYTFGNYQKGQLGRLPSDYGLKP 1059
Score = 104 (41.7 bits), Expect = 1.9e-07, Sum P(4) = 1.9e-07
Identities = 45/171 (26%), Positives = 76/171 (44%)
Query: 254 KLLESAVM--LDVQNISLGAK--HAALVTKEGEVFCWG---EGKDGRLGHKVNMDVSC-P 305
KL E + ++ ++++G HA LV +G VF G G+DG + P
Sbjct: 639 KLTELVISKAANIVHVAVGHDGIHALLVNDDGTVFFAGTARRGEDGDSSKNRRQPKAVKP 698
Query: 306 KLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDT 365
K + + G V +C + +TK+G++ +G + D +G +L +
Sbjct: 699 KKMTKIDGHVVVHAACNNGTSAFVTKTGKLIMYGKDTAHCDAMG--------FVSELLEQ 750
Query: 366 LDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP-KEV 415
V+KVA G+ H ++ GQLF++G G G + N QP K+V
Sbjct: 751 ----HVTKVALGKAHCVALNAKGQLFSFGLNNKGQCGR--IFNKLQPVKDV 795
Score = 92 (37.4 bits), Expect = 2.8e-06, Sum P(4) = 2.8e-06
Identities = 38/142 (26%), Positives = 57/142 (40%)
Query: 262 LDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECL--SGINVQSV 319
+DV ++ G + + G V+ +G K LG K KL E + N+ V
Sbjct: 597 VDVMGMACGKEFGLVRASNGRVYYYG--KSAALGLKCVGRTPTLKLTELVISKAANIVHV 654
Query: 320 SCGEFQTCAL--TKSGEIYTWGHNNHG--ADLVGERRSRSHWLPRKLFDTLDGVRVSKVA 375
+ G AL G ++ G G D RR P+K+ +DG V A
Sbjct: 655 AVGHDGIHALLVNDDGTVFFAGTARRGEDGDSSKNRRQPKAVKPKKM-TKIDGHVVVHAA 713
Query: 376 CGEWHTAIVSTSGQLFTYGDGT 397
C +A V+ +G+L YG T
Sbjct: 714 CNNGTSAFVTKTGKLIMYGKDT 735
Score = 80 (33.2 bits), Expect = 0.00013, Sum P(5) = 0.00013
Identities = 31/107 (28%), Positives = 51/107 (47%)
Query: 238 DGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHK 297
DG S+N+ Q A+ PK + V + + +A VTK G++ +G KD H
Sbjct: 683 DGDSSKNRRQPKAVKPKKMTKIDGHVVVHAACNNGTSAFVTKTGKLIMYG--KD--TAHC 738
Query: 298 VNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHG 344
M +L+E +V V+ G+ AL G+++++G NN G
Sbjct: 739 DAMGF-VSELLEQ----HVTKVALGKAHCVALNAKGQLFSFGLNNKG 780
Score = 46 (21.3 bits), Expect = 1.9e-07, Sum P(4) = 1.9e-07
Identities = 6/13 (46%), Positives = 11/13 (84%)
Query: 665 CDTCYNHLQKITH 677
CDTC++ Q++T+
Sbjct: 5172 CDTCHDDFQRLTN 5184
Score = 42 (19.8 bits), Expect = 0.00013, Sum P(5) = 0.00013
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 553 SGGSVYTWGKNANGQLGLGDSQERETPTFV 582
SG + + NG L Q+ +TP FV
Sbjct: 4638 SGSGGVSGSSSGNGGAVLKAGQQEKTPAFV 4667
Score = 38 (18.4 bits), Expect = 1.9e-07, Sum P(4) = 1.9e-07
Identities = 6/21 (28%), Positives = 14/21 (66%)
Query: 19 LNSVTKIIMGQRTVNFQCQPQ 39
L ++ +I GQ+ +F+ +P+
Sbjct: 265 LKALLDVIQGQQPESFKLEPE 285
Score = 37 (18.1 bits), Expect = 1.2e-05, Sum P(5) = 1.2e-05
Identities = 9/24 (37%), Positives = 11/24 (45%)
Query: 931 ELCHDNSSGSVEDSKVARTEPQQK 954
ELC +SS S +A T K
Sbjct: 3722 ELCSSSSSASGAAGSLAATSSSSK 3745
Score = 37 (18.1 bits), Expect = 1.2e-05, Sum P(5) = 1.2e-05
Identities = 11/49 (22%), Positives = 19/49 (38%)
Query: 764 SVEPTPIPKTQMSTHSPLLRKISLGSNFIPIASTVEKDLSESNKMLNEE 812
+V P ST S L + +PI + + + E+ + EE
Sbjct: 1230 AVTPVADSPAHASTSSLLAALTGTATAGVPINEQMSRSMHEARNQIFEE 1278
>RGD|1311697 [details] [associations]
symbol:Ibtk "inhibitor of Bruton agammaglobulinemia tyrosine
kinase" species:10116 "Rattus norvegicus" [GO:0001933 "negative
regulation of protein phosphorylation" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0019901 "protein kinase binding" evidence=ISO] [GO:0030292
"protein tyrosine kinase inhibitor activity" evidence=ISO]
[GO:0051209 "release of sequestered calcium ion into cytosol"
evidence=ISO] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088 PROSITE:PS50097
SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005737 GO:GO:0051209 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 GO:GO:0030292 OrthoDB:EOG4J6RQ1
GeneTree:ENSGT00700000104160 IPI:IPI00370548
Ensembl:ENSRNOT00000056930 ArrayExpress:D3ZH46 Uniprot:D3ZH46
Length = 1352
Score = 171 (65.3 bits), Expect = 2.3e-07, Sum P(3) = 2.3e-07
Identities = 76/287 (26%), Positives = 132/287 (45%)
Query: 231 GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
GD G SQN LL S V V+ + L H+ ++++G+V+ G G+
Sbjct: 148 GDNTNFTLGHGSQNSKHHPELLDLFSRSRVY--VKQVVLCKFHSVFLSQQGQVYTCGHGR 205
Query: 291 DGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN-HGADLVG 349
GRLGH P+LVE LSG + V+ + T LT+ G +YT+G N H ++
Sbjct: 206 GGRLGHGDEQTCLVPRLVEGLSGHSCSQVAAAKDHTVVLTEDGCVYTFGLNTFHQLGIIP 265
Query: 350 ERRSRSHWLPRKLFDTLDGVRVSKVACGE-WHT-AIVSTSGQLFTYGDGTFGVLGHGNLQ 407
S + +PR+L T+ + V C + W ++ TS G L G+L
Sbjct: 266 PPSSCN--VPRQL--TVRMKKGHTVVCRKAWRFWQVLWTSEDFLVLG------LNSGHLG 315
Query: 408 NVSQPKEVESLRGLKVKSVACGPWHT-AAIVDIMVDRCKS-NAIGGKLFTWGDAD---KG 462
+ +P + + ++ S +H +++V ++VDR +S N K+ + AD K
Sbjct: 316 ILRKPSGQQCVVSVRQTSA----YHILSSLVTLIVDRDESTNVFSVKMQFYLGADSIPKR 371
Query: 463 RLGHVDGERKLLPT--CVTRLVDFDFVQASCGRMLTV-GLTGLGKVY 506
L +K+L + C+ VD + + + G+ + + + G G+V+
Sbjct: 372 MLIRQLNLKKVLVSGGCMEYKVDPEHLTENGGQKICILAMDGAGRVF 418
Score = 155 (59.6 bits), Expect = 1.0e-05, Sum P(3) = 1.0e-05
Identities = 47/157 (29%), Positives = 81/157 (51%)
Query: 278 TKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINV---QSVSCGEFQTCALTKSGE 334
T EV+ WG+ + LGH P+L++ S V Q V C +F + L++ G+
Sbjct: 139 TDPTEVYTWGDNTNFTLGHGSQNSKHHPELLDLFSRSRVYVKQVVLC-KFHSVFLSQQGQ 197
Query: 335 IYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYG 394
+YT GH G +G ++ +PR L + L G S+VA + HT +++ G ++T+G
Sbjct: 198 VYTCGHGRGGR--LGHGDEQTCLVPR-LVEGLSGHSCSQVAAAKDHTVVLTEDGCVYTFG 254
Query: 395 DGTF---GVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
TF G++ + NV P+++ ++R K +V C
Sbjct: 255 LNTFHQLGIIPPPSSCNV--PRQL-TVRMKKGHTVVC 288
Score = 52 (23.4 bits), Expect = 2.3e-07, Sum P(3) = 2.3e-07
Identities = 37/140 (26%), Positives = 58/140 (41%)
Query: 677 HSGRLLKQENQSPRNLLNLQGSLSEEVKEEKGALTPSRGQSFTSKQSRNVERKPGECLES 736
HS +Q+ Q P+ + + SE+ ++ + P S ++ +VE P E L S
Sbjct: 971 HSEFCFQQDTQRPKGKPRQRSNTSEKQTDKPSSRVPPGLGLLKSAKTNSVESLP-ELLTS 1029
Query: 737 ASSLS-SGLQRWGQVSCPIRFKTHCHEKSVE----P----TPIPKTQMSTHSPLLRKISL 787
S S +G+ + P F H VE P TP+P T+ P + +
Sbjct: 1030 DSEGSYAGVGSPRDLQSP-DFTAGFHSDKVEGKAKPYVNGTPLPWTREDL-KPWEKSPTT 1087
Query: 788 GS--NFIPIASTVEKDLSES 805
S FIP +S V+ S S
Sbjct: 1088 KSAPQFIP-SSRVDTSGSSS 1106
Score = 37 (18.1 bits), Expect = 2.3e-07, Sum P(3) = 2.3e-07
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 55 ERSLDLICKDKVQAESWFLGLRAAI 79
E+ +DL+ KDK ES + L +I
Sbjct: 73 EKGVDLLVKDK---ESGWTALHRSI 94
>ASPGD|ASPL0000042168 [details] [associations]
symbol:AN2073 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097
SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408 EMBL:BN001307
Gene3D:1.25.40.20 InterPro:IPR020683 SUPFAM:SSF48403
PROSITE:PS50297 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 EMBL:AACD01000032 PRINTS:PR00633 PROSITE:PS50012
eggNOG:COG5184 OrthoDB:EOG42VCR5 RefSeq:XP_659677.1
ProteinModelPortal:Q5BBK7 EnsemblFungi:CADANIAT00008743
GeneID:2875213 KEGG:ani:AN2073.2 HOGENOM:HOG000182979 OMA:DRLSQIC
Uniprot:Q5BBK7
Length = 1680
Score = 160 (61.4 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 65/222 (29%), Positives = 100/222 (45%)
Query: 419 RGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCV 478
R LK++++A HTA I+ D +SN LF G GRLG D + C+
Sbjct: 421 RPLKIQTLAMSKLHTA----ILTDDPESN-----LFICGFGPGGRLGTGDESTRFSFVCI 471
Query: 479 TR--LVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN--PKAKDRSITVVE---- 530
L + + G+ T+ +T G +++ GS GQLG P+A ++ V+
Sbjct: 472 EGGGLANKKVASVALGQDHTLAITEHGDIFSWGSNKFGQLGYGLPRANNKDDVPVQLSPR 531
Query: 531 ---GKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERE-----TPTFV 582
K+E + G ++ + H V ++ G +YT+GKN GQLGL DS R TP V
Sbjct: 532 QIFNPFKKEVILGAAASAVHSVVYSTSG-LYTFGKN-EGQLGLVDSDARSLEVQTTPRRV 589
Query: 583 EA-LRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMP 623
A L ++SV TA + + + V S+ P
Sbjct: 590 GASLFSTPIQSVSATDQATAILLQNHEVWVFAHYGYSRLSFP 631
Score = 159 (61.0 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 60/207 (28%), Positives = 100/207 (48%)
Query: 249 DALLPKLLESAVMLDVQNISLGAKHAALVTKEGE--VFCWGEGKDGRLGHKVNMDVSCPK 306
D LP ++ A L +Q +++ H A++T + E +F G G GRLG D S
Sbjct: 411 DQDLPAFIK-ARPLKIQTLAMSKLHTAILTDDPESNLFICGFGPGGRLG---TGDESTRF 466
Query: 307 LVECLSG---IN--VQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRS------ 355
C+ G N V SV+ G+ T A+T+ G+I++WG N G G R+ +
Sbjct: 467 SFVCIEGGGLANKKVASVALGQDHTLAITEHGDIFSWGSNKFGQLGYGLPRANNKDDVPV 526
Query: 356 HWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYG--DGTFGVLGHG--NLQNVSQ 411
PR++F+ + A H+ + STSG L+T+G +G G++ +L+ +
Sbjct: 527 QLSPRQIFNPFKKEVILGAAASAVHSVVYSTSG-LYTFGKNEGQLGLVDSDARSLEVQTT 585
Query: 412 PKEV-ESLRGLKVKSVACGPWHTAAIV 437
P+ V SL ++SV+ TA ++
Sbjct: 586 PRRVGASLFSTPIQSVSATDQATAILL 612
>POMBASE|SPCC330.11 [details] [associations]
symbol:btb1 "BTB/POZ domain protein Btb1" species:4896
"Schizosaccharomyces pombe" [GO:0000151 "ubiquitin ligase complex"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IC] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00023 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 UniPathway:UPA00143
PomBase:SPCC330.11 INTERPRO:IPR000408 Pfam:PF00415 EMBL:CU329672
GenomeReviews:CU329672_GR Gene3D:1.25.40.20 InterPro:IPR020683
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0016567 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0006511 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0000151 eggNOG:COG5184
PIR:T41321 RefSeq:NP_587711.1 ProteinModelPortal:O74881
IntAct:O74881 STRING:O74881 EnsemblFungi:SPCC330.11.1
GeneID:2538714 KEGG:spo:SPCC330.11 OMA:STSELCT OrthoDB:EOG42VCR5
NextBio:20799899 Uniprot:O74881
Length = 1347
Score = 158 (60.7 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 65/250 (26%), Positives = 117/250 (46%)
Query: 389 QLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTA-AIVDIMVDRCKSN 447
+L+ +G LG N + S P+ V L+ + +S G + I+D+ + S
Sbjct: 150 ELYGFGTNVNNTLGIANGKEPSSPERVFLLKN-QTESPTSGQLFSRDKILDVQASKFHSV 208
Query: 448 AIGGK----LFTWGDADKGRLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGL 502
+ + ++ G GR+G + D + +P + ++ +Q S ++ LT
Sbjct: 209 VLTDEPSQNVYVCGIGAGGRIGFNTDVQYNFIP--IPGIIH-KVIQISVSHTHSLALTKF 265
Query: 503 GKVYTMGSAVHGQLG--NPKAK-DRSITVVEGKL---KEEFVKGISSG-SYHVAVLTSGG 555
G +Y+ G G+LG N + K D I + ++ K+ + G+++G SY VA +
Sbjct: 266 GSIYSWGKNGSGELGLSNDELKKDDPIQITPRRISAFKDYQIIGMAAGKSYSVAWTDT-- 323
Query: 556 SVYTWGKNANGQLGLGDS-QERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQ 614
+Y+WG N NGQLG+ D TP V L + +V C + A ICL ++ S+
Sbjct: 324 DIYSWGLN-NGQLGISDHISVVSTPRRVAGLLSPVIHAV-C--TTRATICLLQNNSIIAF 379
Query: 615 SSCSQCRMPF 624
+ +Q ++PF
Sbjct: 380 CNYNQVKLPF 389
Score = 53 (23.7 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 11/34 (32%), Positives = 20/34 (58%)
Query: 997 EKAAERWWEENQVVVYQKYGI---EEYSNLNQNQ 1027
E+ ++WWEE + V ++ GI E ++ N+ Q
Sbjct: 1267 EEEFQKWWEEESLRVQKELGILKTERDTSTNRKQ 1300
>UNIPROTKB|O75592 [details] [associations]
symbol:MYCBP2 "Probable E3 ubiquitin-protein ligase MYCBP2"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0015630 "microtubule cytoskeleton"
evidence=IEA] [GO:0021785 "branchiomotor neuron axon guidance"
evidence=IEA] [GO:0021952 "central nervous system projection neuron
axonogenesis" evidence=IEA] [GO:0030424 "axon" evidence=IEA]
[GO:0032880 "regulation of protein localization" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0051493 "regulation of cytoskeleton organization" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001841
InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415
Prosite:PS00518 GO:GO:0005634 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0015630 GO:GO:0006355 GO:GO:0046872 GO:GO:0016874
GO:GO:0030424 GO:GO:0008270 GO:GO:0032880 GO:GO:0006351
GO:GO:0016567 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0021952 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 CleanEx:HS_PAM InterPro:IPR004939
PROSITE:PS51284 InterPro:IPR012983 Pfam:PF08005 EMBL:AC001226
InterPro:IPR017868 EMBL:CH471093 PROSITE:PS50194 KO:K10693
PANTHER:PTHR12846 EMBL:AF075587 EMBL:AL159154 EMBL:AL159158
EMBL:AL359257 EMBL:AB020723 EMBL:BC037971 EMBL:AF083244
IPI:IPI00289776 IPI:IPI01014189 RefSeq:NP_055872.4
UniGene:Hs.591221 ProteinModelPortal:O75592 SMR:O75592
DIP:DIP-28142N IntAct:O75592 MINT:MINT-1632199 STRING:O75592
PhosphoSite:O75592 PaxDb:O75592 PRIDE:O75592
Ensembl:ENST00000357337 Ensembl:ENST00000544440 GeneID:23077
KEGG:hsa:23077 UCSC:uc010aev.3 CTD:23077 GeneCards:GC13M077618
HGNC:HGNC:23386 HPA:HPA039945 MIM:610392 neXtProt:NX_O75592
PharmGKB:PA134871126 eggNOG:NOG240798 HOVERGEN:HBG053153
InParanoid:O75592 OrthoDB:EOG4VQ9NB ChiTaRS:MYCBP2 GenomeRNAi:23077
NextBio:44191 ArrayExpress:O75592 Bgee:O75592 CleanEx:HS_MYCBP2
Genevestigator:O75592 GermOnline:ENSG00000005810 GO:GO:0021785
Uniprot:O75592
Length = 4640
Score = 133 (51.9 bits), Expect = 4.9e-07, Sum P(4) = 4.9e-07
Identities = 33/83 (39%), Positives = 43/83 (51%)
Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSY 546
VQ SCG +V L G VYT G HGQLG+ R + L + +++GS
Sbjct: 905 VQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQ-VTAGSN 963
Query: 547 HVAVLTSGGSVYTWGKNANGQLG 569
H AVL G V+T+G + GQLG
Sbjct: 964 HTAVLLMDGQVFTFGSFSKGQLG 986
Score = 132 (51.5 bits), Expect = 1.9e-06, Sum P(6) = 1.9e-06
Identities = 32/97 (32%), Positives = 55/97 (56%)
Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
+R +V+CG H+ ++ +G ++T+G G G LGHG++ + P V++L G + V
Sbjct: 902 LRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQ-VTA 960
Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG 465
G HTA + ++D G++FT+G KG+LG
Sbjct: 961 GSNHTAVL---LMD--------GQVFTFGSFSKGQLG 986
Score = 121 (47.7 bits), Expect = 1.2e-05, Sum P(6) = 1.2e-05
Identities = 30/83 (36%), Positives = 40/83 (48%)
Query: 541 ISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSIT 600
+S G +H VL G VYT+G +GQLG GD R PT V+AL + V GS+ T
Sbjct: 907 VSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQ-VTAGSNHT 965
Query: 601 AAICLHKSISVGDQSSCSQCRMP 623
A + + + S Q P
Sbjct: 966 AVLLMDGQVFTFGSFSKGQLGRP 988
Score = 108 (43.1 bits), Expect = 4.9e-07, Sum P(4) = 4.9e-07
Identities = 38/145 (26%), Positives = 64/145 (44%)
Query: 264 VQNISLG--AKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC----PKLVECLSGINVQ 317
+ + S+G HA LV ++G +F G G G PK + + G V
Sbjct: 544 IVHFSVGHDGSHALLVAEDGSIFFTGSASKGEDGESTKSRRQSKPYKPKKIIKMEGKIVV 603
Query: 318 SVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
+C + ++K GE+Y +G + +D S S L L G V++VA G
Sbjct: 604 YTACNNGSSSVISKDGELYMFGKDAIYSD------SSS------LVTDLKGHFVTQVAMG 651
Query: 378 EWHTAIVSTSGQLFTYGDGTFGVLG 402
+ HT ++ +G+++T+G G G
Sbjct: 652 KAHTCVLMKNGEVWTFGVNNKGQCG 676
Score = 105 (42.0 bits), Expect = 1.5e-06, Sum P(6) = 1.5e-06
Identities = 33/114 (28%), Positives = 55/114 (48%)
Query: 231 GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
G DG ++++ Q PK + V + +++++K+GE++ +G K
Sbjct: 569 GSASKGEDGESTKSRRQSKPYKPKKIIKMEGKIVVYTACNNGSSSVISKDGELYMFG--K 626
Query: 291 DGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHG 344
D + D S LV L G V V+ G+ TC L K+GE++T+G NN G
Sbjct: 627 DA-----IYSDSS--SLVTDLKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKG 673
Score = 50 (22.7 bits), Expect = 8.1e-07, Sum P(6) = 8.1e-07
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 831 NQKVQECQQKIEEAWSLAR 849
N V+ C+ EAWSLAR
Sbjct: 2604 NSMVEFCESDEGEAWSLAR 2622
Score = 43 (20.2 bits), Expect = 4.9e-07, Sum P(4) = 4.9e-07
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 55 ERSLDLICKDKVQAESWFL-GLRAA 78
+RS+ + K+Q + WF G++ A
Sbjct: 286 QRSVQAVLVGKIQIQDWFSNGIKKA 310
Score = 41 (19.5 bits), Expect = 8.1e-07, Sum P(6) = 8.1e-07
Identities = 12/41 (29%), Positives = 21/41 (51%)
Query: 921 SNKLKSVYGR-ELCHDNSSGSVEDSKVARTEPQQKGTKASK 960
S+K S G+ EL +S D +++RT QK + ++
Sbjct: 2684 SSKPASTSGKSELSSKHSRSLKPDGRMSRTTADQKKPRGTE 2724
Score = 40 (19.1 bits), Expect = 4.9e-07, Sum P(4) = 4.9e-07
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 981 GQKGLKRVRFSRRRFTEKAAERWW 1004
G L V+ S RFT+ + R W
Sbjct: 1676 GLNSLHSVKASANRFTKTSQGRSW 1699
Score = 40 (19.1 bits), Expect = 3.2e-06, Sum P(5) = 3.2e-06
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 756 FKTHCHEKSVEPTPIPKTQMSTHSP 780
F CH+ T IPK ++ H P
Sbjct: 4578 FCNACHDDFQRMTSIPKEELP-HCP 4601
Score = 38 (18.4 bits), Expect = 8.1e-07, Sum P(6) = 8.1e-07
Identities = 11/49 (22%), Positives = 23/49 (46%)
Query: 705 EEKGALTPSRGQSFTSKQSRNVERKPGECLESASSLSSGLQRWGQVSCP 753
E K + S Q++ +R PG +A+S ++ + +G ++ P
Sbjct: 2269 EVKAVPVSQKKMSLQQDQAKKPQRIPGSPAVTAASSNTDMT-YGGLASP 2316
Score = 38 (18.4 bits), Expect = 1.5e-05, Sum P(5) = 1.5e-05
Identities = 6/12 (50%), Positives = 8/12 (66%)
Query: 633 CYNCGLHFCSAC 644
C+ HFC+AC
Sbjct: 4572 CFGT-THFCNAC 4582
Score = 37 (18.1 bits), Expect = 9.7e-07, Sum P(4) = 9.7e-07
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 1005 EENQVVVYQKYGIEEYSNLNQ 1025
EE Q V+ + Y E+YS +N+
Sbjct: 1179 EETQAVM-KVYSKEDYSVVNR 1198
Score = 37 (18.1 bits), Expect = 9.6e-06, Sum P(5) = 9.6e-06
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 462 GRLGHVDGERKLLPTC 477
GR DG++K +P C
Sbjct: 4208 GRWMGKDGQQKQMPMC 4223
>UNIPROTKB|J3KPZ3 [details] [associations]
symbol:MYCBP2 "Probable E3 ubiquitin-protein ligase MYCBP2"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872 GO:GO:0008270
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.30.40.10 InterPro:IPR014756 InterPro:IPR013083
SUPFAM:SSF81296 InterPro:IPR008979 SUPFAM:SSF49785 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 EMBL:AC001226 InterPro:IPR017868
PROSITE:PS50194 KO:K10693 PANTHER:PTHR12846 EMBL:AL159154
EMBL:AL159158 EMBL:AL359257 RefSeq:NP_055872.4 UniGene:Hs.591221
GeneID:23077 KEGG:hsa:23077 CTD:23077 HGNC:HGNC:23386
ChiTaRS:MYCBP2 OMA:LLSILHW ProteinModelPortal:J3KPZ3
Ensembl:ENST00000407578 Uniprot:J3KPZ3
Length = 4678
Score = 133 (51.9 bits), Expect = 5.1e-07, Sum P(4) = 5.1e-07
Identities = 33/83 (39%), Positives = 43/83 (51%)
Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSY 546
VQ SCG +V L G VYT G HGQLG+ R + L + +++GS
Sbjct: 943 VQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQ-VTAGSN 1001
Query: 547 HVAVLTSGGSVYTWGKNANGQLG 569
H AVL G V+T+G + GQLG
Sbjct: 1002 HTAVLLMDGQVFTFGSFSKGQLG 1024
Score = 132 (51.5 bits), Expect = 2.0e-06, Sum P(6) = 2.0e-06
Identities = 32/97 (32%), Positives = 55/97 (56%)
Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
+R +V+CG H+ ++ +G ++T+G G G LGHG++ + P V++L G + V
Sbjct: 940 LRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQ-VTA 998
Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG 465
G HTA + ++D G++FT+G KG+LG
Sbjct: 999 GSNHTAVL---LMD--------GQVFTFGSFSKGQLG 1024
Score = 121 (47.7 bits), Expect = 1.2e-05, Sum P(6) = 1.2e-05
Identities = 30/83 (36%), Positives = 40/83 (48%)
Query: 541 ISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSIT 600
+S G +H VL G VYT+G +GQLG GD R PT V+AL + V GS+ T
Sbjct: 945 VSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQ-VTAGSNHT 1003
Query: 601 AAICLHKSISVGDQSSCSQCRMP 623
A + + + S Q P
Sbjct: 1004 AVLLMDGQVFTFGSFSKGQLGRP 1026
Score = 108 (43.1 bits), Expect = 5.1e-07, Sum P(4) = 5.1e-07
Identities = 38/145 (26%), Positives = 64/145 (44%)
Query: 264 VQNISLG--AKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC----PKLVECLSGINVQ 317
+ + S+G HA LV ++G +F G G G PK + + G V
Sbjct: 582 IVHFSVGHDGSHALLVAEDGSIFFTGSASKGEDGESTKSRRQSKPYKPKKIIKMEGKIVV 641
Query: 318 SVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
+C + ++K GE+Y +G + +D S S L L G V++VA G
Sbjct: 642 YTACNNGSSSVISKDGELYMFGKDAIYSD------SSS------LVTDLKGHFVTQVAMG 689
Query: 378 EWHTAIVSTSGQLFTYGDGTFGVLG 402
+ HT ++ +G+++T+G G G
Sbjct: 690 KAHTCVLMKNGEVWTFGVNNKGQCG 714
Score = 105 (42.0 bits), Expect = 1.6e-06, Sum P(6) = 1.6e-06
Identities = 33/114 (28%), Positives = 55/114 (48%)
Query: 231 GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
G DG ++++ Q PK + V + +++++K+GE++ +G K
Sbjct: 607 GSASKGEDGESTKSRRQSKPYKPKKIIKMEGKIVVYTACNNGSSSVISKDGELYMFG--K 664
Query: 291 DGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHG 344
D + D S LV L G V V+ G+ TC L K+GE++T+G NN G
Sbjct: 665 DA-----IYSDSS--SLVTDLKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKG 711
Score = 50 (22.7 bits), Expect = 8.4e-07, Sum P(6) = 8.4e-07
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 831 NQKVQECQQKIEEAWSLAR 849
N V+ C+ EAWSLAR
Sbjct: 2642 NSMVEFCESDEGEAWSLAR 2660
Score = 43 (20.2 bits), Expect = 5.1e-07, Sum P(4) = 5.1e-07
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 55 ERSLDLICKDKVQAESWFL-GLRAA 78
+RS+ + K+Q + WF G++ A
Sbjct: 324 QRSVQAVLVGKIQIQDWFSNGIKKA 348
Score = 41 (19.5 bits), Expect = 8.4e-07, Sum P(6) = 8.4e-07
Identities = 12/41 (29%), Positives = 21/41 (51%)
Query: 921 SNKLKSVYGR-ELCHDNSSGSVEDSKVARTEPQQKGTKASK 960
S+K S G+ EL +S D +++RT QK + ++
Sbjct: 2722 SSKPASTSGKSELSSKHSRSLKPDGRMSRTTADQKKPRGTE 2762
Score = 40 (19.1 bits), Expect = 5.1e-07, Sum P(4) = 5.1e-07
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 981 GQKGLKRVRFSRRRFTEKAAERWW 1004
G L V+ S RFT+ + R W
Sbjct: 1714 GLNSLHSVKASANRFTKTSQGRSW 1737
Score = 40 (19.1 bits), Expect = 3.3e-06, Sum P(5) = 3.3e-06
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 756 FKTHCHEKSVEPTPIPKTQMSTHSP 780
F CH+ T IPK ++ H P
Sbjct: 4616 FCNACHDDFQRMTSIPKEELP-HCP 4639
Score = 38 (18.4 bits), Expect = 8.4e-07, Sum P(6) = 8.4e-07
Identities = 11/49 (22%), Positives = 23/49 (46%)
Query: 705 EEKGALTPSRGQSFTSKQSRNVERKPGECLESASSLSSGLQRWGQVSCP 753
E K + S Q++ +R PG +A+S ++ + +G ++ P
Sbjct: 2307 EVKAVPVSQKKMSLQQDQAKKPQRIPGSPAVTAASSNTDMT-YGGLASP 2354
Score = 38 (18.4 bits), Expect = 1.5e-05, Sum P(5) = 1.5e-05
Identities = 6/12 (50%), Positives = 8/12 (66%)
Query: 633 CYNCGLHFCSAC 644
C+ HFC+AC
Sbjct: 4610 CFGT-THFCNAC 4620
Score = 37 (18.1 bits), Expect = 1.0e-06, Sum P(4) = 1.0e-06
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 1005 EENQVVVYQKYGIEEYSNLNQ 1025
EE Q V+ + Y E+YS +N+
Sbjct: 1217 EETQAVM-KVYSKEDYSVVNR 1236
Score = 37 (18.1 bits), Expect = 1.0e-05, Sum P(5) = 1.0e-05
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 462 GRLGHVDGERKLLPTC 477
GR DG++K +P C
Sbjct: 4246 GRWMGKDGQQKQMPMC 4261
>UNIPROTKB|H9KZT3 [details] [associations]
symbol:Gga.53772 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR000306 Pfam:PF01363 SMART:SM00064 GO:GO:0046872
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178
GeneTree:ENSGT00550000074558 EMBL:AADN02025204
Ensembl:ENSGALT00000018570 OMA:HAQCSSL Uniprot:H9KZT3
Length = 332
Score = 147 (56.8 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 28/74 (37%), Positives = 41/74 (55%)
Query: 599 ITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNK 658
+ A+ H + + + C QC F R+KH+C NCG FC+ACS+ ++ P+
Sbjct: 254 VNKALKGHTWLKDDEATHCKQCEKEFSISRRKHHCRNCGDIFCNACSSNELA----LPSY 309
Query: 659 GKPSRVCDTCYNHL 672
KP RVCDTC+ L
Sbjct: 310 PKPVRVCDTCHTLL 323
>POMBASE|SPAC19A8.05c [details] [associations]
symbol:sst4 "sorting receptor for ubiquitinated
membrane proteins, ESCRT 0 complex subunit Sst4" species:4896
"Schizosaccharomyces pombe" [GO:0005628 "prospore membrane"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006897 "endocytosis" evidence=IMP]
[GO:0006900 "membrane budding" evidence=IC] [GO:0010008 "endosome
membrane" evidence=IEA] [GO:0031321 "ascospore-type prospore
assembly" evidence=IGI] [GO:0032266
"phosphatidylinositol-3-phosphate binding" evidence=ISO]
[GO:0033565 "ESCRT-0 complex" evidence=IPI] [GO:0043130 "ubiquitin
binding" evidence=IMP] [GO:0043328 "protein targeting to vacuole
involved in ubiquitin-dependent protein catabolic process via the
multivesicular body sorting pathway" evidence=IMP] [GO:0045053
"protein retention in Golgi apparatus" evidence=ISO] [GO:0045324
"late endosome to vacuole transport" evidence=IMP] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR000306
InterPro:IPR002014 Pfam:PF00790 Pfam:PF01363 PROSITE:PS50179
SMART:SM00064 PomBase:SPAC19A8.05c Pfam:PF02809 GO:GO:0005829
GO:GO:0005634 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0046872
GO:GO:0006897 GO:GO:0010008 GO:GO:0005628 HSSP:P40343
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 eggNOG:NOG257212
InterPro:IPR003903 SMART:SM00726 PROSITE:PS50330 Gene3D:1.25.40.90
InterPro:IPR008942 SUPFAM:SSF48464 GO:GO:0043130 GO:GO:0032266
GO:GO:0043328 GO:GO:0006900 GO:GO:0045053 GO:GO:0031321
InterPro:IPR018205 SMART:SM00288 KO:K12182 InterPro:IPR017073
PIRSF:PIRSF036956 GO:GO:0033565 OMA:VRVDDGC OrthoDB:EOG40VZXZ
PIR:T37956 RefSeq:NP_593787.1 ProteinModelPortal:O13821 SMR:O13821
STRING:O13821 EnsemblFungi:SPAC19A8.05c.1 GeneID:2542403
KEGG:spo:SPAC19A8.05c NextBio:20803462 Uniprot:O13821
Length = 610
Score = 148 (57.2 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 27/58 (46%), Positives = 36/58 (62%)
Query: 613 DQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYN 670
D C +CR PF F +KH+C NCG FC+ CS+K + L N+ P RVCD+CY+
Sbjct: 172 DSEVCLRCRTPFTFTNRKHHCRNCGGVFCNQCSSKTLSLPHLGINQ--PVRVCDSCYS 227
Score = 48 (22.0 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 18/83 (21%), Positives = 37/83 (44%)
Query: 761 HEKSVEPTPIPKTQMSTHSPLLRKISLGSNFIPIAS---TVEKDLSESNKMLNEEVQRLR 817
H K+ TP + + R I L +P + + E+ SE+N +++++
Sbjct: 246 HAKT-RKTPSKPVTNNEDEDIKRAIELSLKEMPQSREPPSYERP-SEANVVISQDQHLTE 303
Query: 818 DQARNLEKQCQIGNQKVQECQQK 840
D+ L++ I ++ Q+ QK
Sbjct: 304 DEDEELKRAIAISLEEAQKSSQK 326
>UNIPROTKB|J3KQ33 [details] [associations]
symbol:ALS2 "Alsin" species:9606 "Homo sapiens" [GO:0001662
"behavioral fear response" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0001726 "ruffle"
evidence=IEA] [GO:0001881 "receptor recycling" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA] [GO:0007528
"neuromuscular junction development" evidence=IEA] [GO:0007626
"locomotory behavior" evidence=IEA] [GO:0008104 "protein
localization" evidence=IEA] [GO:0008219 "cell death" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016050 "vesicle organization"
evidence=IEA] [GO:0016197 "endosomal transport" evidence=IEA]
[GO:0016601 "Rac protein signal transduction" evidence=IEA]
[GO:0030027 "lamellipodium" evidence=IEA] [GO:0030424 "axon"
evidence=IEA] [GO:0030426 "growth cone" evidence=IEA] [GO:0032313
"regulation of Rab GTPase activity" evidence=IEA] [GO:0035249
"synaptic transmission, glutamatergic" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IEA] INTERPRO:IPR000408
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 EMBL:AC007242
EMBL:AC007279 HGNC:HGNC:443 ChiTaRS:ALS2 PROSITE:PS50012
ProteinModelPortal:J3KQ33 Ensembl:ENST00000409632 Uniprot:J3KQ33
Length = 139
Score = 122 (48.0 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 32/89 (35%), Positives = 47/89 (52%)
Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
V +LG KH L+T++GEV+ +G R G V + S P L L G V +V+ G
Sbjct: 43 VLQAALGVKHGVLLTEDGEVYSFGT-LPWRSG-PVEICPSSPILENALVGQYVITVATGS 100
Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERR 352
F + A+T +G Y WG N+ G V ++
Sbjct: 101 FHSGAVTDNGVAYMWGENSAGQCAVANQQ 129
Score = 109 (43.4 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 28/88 (31%), Positives = 48/88 (54%)
Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSY 546
+QA+ G V LT G+VY+ G+ + + G P S ++E L ++V +++GS+
Sbjct: 44 LQAALGVKHGVLLTEDGEVYSFGT-LPWRSG-PVEICPSSPILENALVGQYVITVATGSF 101
Query: 547 HVAVLTSGGSVYTWGKNANGQLGLGDSQ 574
H +T G Y WG+N+ GQ + + Q
Sbjct: 102 HSGAVTDNGVAYMWGENSAGQCAVANQQ 129
>UNIPROTKB|E1C396 [details] [associations]
symbol:HGS "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0005769 "early
endosome" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0046426 "negative regulation of JAK-STAT
cascade" evidence=IEA] InterPro:IPR000306 InterPro:IPR002014
Pfam:PF00790 Pfam:PF01363 PROSITE:PS50179 SMART:SM00064
GO:GO:0006886 GO:GO:0046872 Gene3D:3.30.40.10 InterPro:IPR017455
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
PROSITE:PS50178 InterPro:IPR003903 SMART:SM00726 PROSITE:PS50330
GO:GO:0005769 Gene3D:1.25.40.90 InterPro:IPR008942 SUPFAM:SSF48464
GO:GO:0046426 InterPro:IPR018205 SMART:SM00288
GeneTree:ENSGT00670000098022 InterPro:IPR024641 InterPro:IPR017073
Pfam:PF12210 PIRSF:PIRSF036956 EMBL:AADN02053584 IPI:IPI00585116
Ensembl:ENSGALT00000011691 Uniprot:E1C396
Length = 705
Score = 137 (53.3 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 28/64 (43%), Positives = 34/64 (53%)
Query: 613 DQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNKG--KPSRVCDTCYN 670
D C +CR+ FG +KH+C CG FC CS+K S P G K RVC+ CY
Sbjct: 162 DAEECHRCRVQFGVVTRKHHCRACGQIFCGKCSSKY----STIPKFGIEKEVRVCEPCYE 217
Query: 671 HLQK 674
HL K
Sbjct: 218 HLNK 221
Score = 58 (25.5 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 24/108 (22%), Positives = 47/108 (43%)
Query: 912 SLCSSPIVFSNKLKSVY--GRELCHDNSSGSVEDSKVARTEPQQKGTKASKLEYAEQYEP 969
+L ++ F N++KS + GR + +D++ S+ S + PQ ++L+ Y
Sbjct: 404 ALQNAVTTFVNRMKSNHMRGRSITNDSAVLSLFQS-INNMHPQLLEL-LNQLDERRMYYE 461
Query: 970 GIYITFTTLPSGQKGLKRVRFSRRRFTEKAAERWWEENQVVVYQKYGI 1017
+ + + L +R R +AAE + Q+ + QK I
Sbjct: 462 SLQDKLAQIRDARGALNALREEHREKVRRAAEEAERQRQIQLAQKLEI 509
Score = 48 (22.0 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 14/45 (31%), Positives = 24/45 (53%)
Query: 806 NKMLNEEVQRLRDQARNLEKQCQIG-NQKVQECQQKIEEAWSLAR 849
N + E +++R A E+Q QI QK++ +QK +E + R
Sbjct: 478 NALREEHREKVRRAAEEAERQRQIQLAQKLEIMRQKKQEYLEMQR 522
Score = 46 (21.3 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 19/66 (28%), Positives = 35/66 (53%)
Query: 783 RKISLGSNFIPIASTVEKDLSESNKMLNEEVQRLRDQARNLEKQCQIGNQKVQECQQKIE 842
R+I L + I +++ E + L +QRL++Q + E+Q ++ QK Q Q + +
Sbjct: 499 RQIQLAQK-LEIMRQKKQEYLEMQRQL--AIQRLQEQEK--ERQMRLEQQK-QTIQMRAQ 552
Query: 843 -EAWSL 847
A+SL
Sbjct: 553 MPAFSL 558
>RGD|69225 [details] [associations]
symbol:Hgs "hepatocyte growth factor-regulated tyrosine kinase
substrate" species:10116 "Rattus norvegicus" [GO:0005515 "protein
binding" evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005768 "endosome" evidence=ISO] [GO:0005769 "early endosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0008333
"endosome to lysosome transport" evidence=IMP] [GO:0016020
"membrane" evidence=IDA] [GO:0019904 "protein domain specific
binding" evidence=ISO;NAS] [GO:0030141 "secretory granule"
evidence=IDA] [GO:0031901 "early endosome membrane" evidence=IEA]
[GO:0032585 "multivesicular body membrane" evidence=IEA] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO] [GO:0046426
"negative regulation of JAK-STAT cascade" evidence=IEA;ISO]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000306
InterPro:IPR002014 Pfam:PF00790 Pfam:PF01363 PROSITE:PS50179
SMART:SM00064 RGD:69225 GO:GO:0005829 GO:GO:0019904 GO:GO:0006886
GO:GO:0031901 GO:GO:0016020 GO:GO:0046872 GO:GO:0030141
GO:GO:0032585 Gene3D:3.30.40.10 InterPro:IPR017455
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
PROSITE:PS50178 eggNOG:NOG257212 GO:GO:0008333 InterPro:IPR003903
SMART:SM00726 PROSITE:PS50330 Gene3D:1.25.40.90 InterPro:IPR008942
SUPFAM:SSF48464 GO:GO:0046426 InterPro:IPR018205 SMART:SM00288
CTD:9146 HOVERGEN:HBG062917 KO:K12182 OrthoDB:EOG4H463C
InterPro:IPR024641 InterPro:IPR017073 Pfam:PF12210 PIRSF:PIRSF036956
EMBL:U87863 EMBL:AB002811 EMBL:AF036344 EMBL:BC083561
IPI:IPI00201027 IPI:IPI00208700 RefSeq:NP_062260.2 UniGene:Rn.21
ProteinModelPortal:Q9JJ50 SMR:Q9JJ50 MINT:MINT-107197 STRING:Q9JJ50
PhosphoSite:Q9JJ50 PRIDE:Q9JJ50 GeneID:56084 KEGG:rno:56084
NextBio:611106 ArrayExpress:Q9JJ50 Genevestigator:Q9JJ50
Uniprot:Q9JJ50
Length = 776
Score = 129 (50.5 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 27/64 (42%), Positives = 33/64 (51%)
Query: 613 DQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNKG--KPSRVCDTCYN 670
D C +CR+ FG +KH+C CG FC CS+K S P G K RVC+ CY
Sbjct: 162 DAEECHRCRVQFGVVTRKHHCRACGQIFCGKCSSKY----STIPKFGIEKEVRVCEPCYE 217
Query: 671 HLQK 674
L K
Sbjct: 218 QLNK 221
Score = 66 (28.3 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 25/100 (25%), Positives = 45/100 (45%)
Query: 920 FSNKLKSVY--GRELCHDNSSGSVEDSKVARTEPQQKGTKASKLEYAEQYEPGIYITFTT 977
F N++KS + GR + +D++ S+ S + T PQ ++L+ Y G+
Sbjct: 418 FVNRMKSNHMRGRSITNDSAVLSLFQS-INSTHPQLLEL-LNRLDERRLYYEGLQDKLAQ 475
Query: 978 LPSGQKGLKRVRFSRRRFTEKAAERWWEENQVVVYQKYGI 1017
+ + L +R R +AAE + Q+ + QK I
Sbjct: 476 IRDARGALSALREEHREKLRRAAEEAERQRQIQLAQKLEI 515
>RGD|1305099 [details] [associations]
symbol:Rufy1 "RUN and FYVE domain containing 1" species:10116
"Rattus norvegicus" [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0008565 "protein transporter activity" evidence=ISO]
[GO:0015031 "protein transport" evidence=ISO] [GO:0030100
"regulation of endocytosis" evidence=ISO] [GO:0005770 "late
endosome" evidence=ISO] [GO:0005829 "cytosol" evidence=ISO]
InterPro:IPR000306 Pfam:PF01363 SMART:SM00064 RGD:1305099
GO:GO:0005737 GO:GO:0046872 GO:GO:0008565 GO:GO:0030100
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 eggNOG:NOG270133
HOVERGEN:HBG057053 HOGENOM:HOG000030913 OrthoDB:EOG41NTKP
IPI:IPI00372367 UniGene:Rn.39348 EMBL:BC099227 UCSC:RGD:1305099
InParanoid:Q4FZR3 ArrayExpress:Q4FZR3 Genevestigator:Q4FZR3
Uniprot:Q4FZR3
Length = 394
Score = 140 (54.3 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 26/74 (35%), Positives = 40/74 (54%)
Query: 599 ITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNK 658
+ A+ H + + + C QC F R+KH+C NCG FC+ CS+ ++ P+
Sbjct: 316 VNKALKGHTWLKDDEATHCKQCEKDFSISRRKHHCRNCGHIFCNTCSSNELA----LPSY 371
Query: 659 GKPSRVCDTCYNHL 672
KP RVCD+C+ L
Sbjct: 372 PKPVRVCDSCHTLL 385
>UNIPROTKB|E1C6V3 [details] [associations]
symbol:RUFY1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR000306 Pfam:PF01363 SMART:SM00064 GO:GO:0046872
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178
InterPro:IPR004012 Pfam:PF02759 SMART:SM00593 PROSITE:PS50826
OMA:AITSFEG GeneTree:ENSGT00550000074558 EMBL:AADN02028603
EMBL:AADN02028604 EMBL:AADN02028605 IPI:IPI00584008
Ensembl:ENSGALT00000009631 Uniprot:E1C6V3
Length = 681
Score = 143 (55.4 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 27/74 (36%), Positives = 41/74 (55%)
Query: 599 ITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNK 658
+ A+ H + + + C QC F R+KH+C NCG FC+ACS+ ++ P+
Sbjct: 603 VNKALKGHTWLKDDEATHCKQCEKEFSISRRKHHCRNCGDIFCNACSSNELA----LPSY 658
Query: 659 GKPSRVCDTCYNHL 672
KP RVCD+C+ L
Sbjct: 659 PKPVRVCDSCHTLL 672
>DICTYBASE|DDB_G0286231 [details] [associations]
symbol:DDB_G0286231 "FYVE-type zinc finger-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0046872
"metal ion binding" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR000306 Pfam:PF01363 SMART:SM00064
dictyBase:DDB_G0286231 GO:GO:0046872 EMBL:AAFI02000085
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 eggNOG:NOG247076
RefSeq:XP_637797.1 ProteinModelPortal:Q54M34 PRIDE:Q54M34
EnsemblProtists:DDB0305107 GeneID:8625511 KEGG:ddi:DDB_G0286231
InParanoid:Q54M34 OMA:CDECYRM ProtClustDB:CLSZ2430113
Uniprot:Q54M34
Length = 88
Score = 116 (45.9 bits), Expect = 9.4e-06, P = 9.4e-06
Identities = 21/54 (38%), Positives = 30/54 (55%)
Query: 616 SCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCY 669
+C +C+ F ++H+C CGL FC+ CS+ + L N P RVCD CY
Sbjct: 31 NCHKCKASFTLLNRRHHCRRCGLVFCNRCSSNEAKIPQLNYNF-VPVRVCDECY 83
>UNIPROTKB|E2QWE3 [details] [associations]
symbol:HGS "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046426 "negative regulation of JAK-STAT
cascade" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0005769 "early endosome" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR000306
InterPro:IPR002014 Pfam:PF00790 Pfam:PF01363 PROSITE:PS50179
SMART:SM00064 GO:GO:0006886 GO:GO:0046872 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 InterPro:IPR003903 SMART:SM00726
PROSITE:PS50330 GO:GO:0005769 Gene3D:1.25.40.90 InterPro:IPR008942
SUPFAM:SSF48464 GO:GO:0046426 InterPro:IPR018205 SMART:SM00288
CTD:9146 GeneTree:ENSGT00670000098022 KO:K12182 OMA:QEYLEMQ
InterPro:IPR024641 InterPro:IPR017073 Pfam:PF12210
PIRSF:PIRSF036956 EMBL:AAEX03006169 RefSeq:XP_540486.2
Ensembl:ENSCAFT00000009350 GeneID:483367 KEGG:cfa:483367
Uniprot:E2QWE3
Length = 782
Score = 129 (50.5 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 27/64 (42%), Positives = 33/64 (51%)
Query: 613 DQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNKG--KPSRVCDTCYN 670
D C +CR+ FG +KH+C CG FC CS+K S P G K RVC+ CY
Sbjct: 162 DAEECHRCRVQFGVVTRKHHCRACGQIFCGKCSSKY----STIPKFGIEKEVRVCEPCYE 217
Query: 671 HLQK 674
L K
Sbjct: 218 QLNK 221
Score = 63 (27.2 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 26/108 (24%), Positives = 48/108 (44%)
Query: 912 SLCSSPIVFSNKLKS--VYGRELCHDNSSGSVEDSKVARTEPQQKGTKASKLEYAEQYEP 969
+L ++ F N++KS V GR + +D++ S+ S + PQ ++L+ Y
Sbjct: 414 ALQNAVTTFVNRMKSNHVRGRSITNDSAVLSLFQS-INSMHPQLLEL-LNQLDERRLYYE 471
Query: 970 GIYITFTTLPSGQKGLKRVRFSRRRFTEKAAERWWEENQVVVYQKYGI 1017
G+ + + L +R R +AAE + Q+ + QK I
Sbjct: 472 GLQDKLAQIRDARGALSALREEHREKLRRAAEEAERQRQIQLAQKLEI 519
>UNIPROTKB|F1S429 [details] [associations]
symbol:RUFY1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030100 "regulation of endocytosis" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000306
Pfam:PF01363 PROSITE:PS50089 SMART:SM00064 GO:GO:0005737
GO:GO:0046872 GO:GO:0008565 GO:GO:0008270 GO:GO:0030100
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178
InterPro:IPR004012 Pfam:PF02759 SMART:SM00593 PROSITE:PS50826
OMA:AITSFEG GeneTree:ENSGT00550000074558 EMBL:CU914196
EMBL:CU915704 Ensembl:ENSSSCT00000015318 Uniprot:F1S429
Length = 718
Score = 141 (54.7 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 28/81 (34%), Positives = 44/81 (54%)
Query: 599 ITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNK 658
+ A+ H + + + C QC F R+KH+C NCG FC+ CS+ ++ P+
Sbjct: 639 VNKALKGHTWLKDDEATHCKQCEKEFSISRRKHHCRNCGHIFCNTCSSNELA----LPSY 694
Query: 659 GKPSRVCDTCYNHL-QKITHS 678
KP RVCD+C+ L Q+ + S
Sbjct: 695 PKPVRVCDSCHTLLLQRCSSS 715
>WB|WBGene00012370 [details] [associations]
symbol:W09G3.7 species:6239 "Caenorhabditis elegans"
[GO:0045132 "meiotic chromosome segregation" evidence=IMP]
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0045132 PRINTS:PR00633
PROSITE:PS50012 EMBL:AL032625 GeneTree:ENSGT00700000104312
EMBL:Z82080 EMBL:AL023854 RefSeq:NP_001021671.2
ProteinModelPortal:G5EEZ1 SMR:G5EEZ1 PRIDE:G5EEZ1
EnsemblMetazoa:W09G3.7a GeneID:173245 KEGG:cel:CELE_W09G3.7
CTD:173245 WormBase:W09G3.7a OMA:RKKVDCA NextBio:878861
Uniprot:G5EEZ1
Length = 404
Score = 137 (53.3 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 95/395 (24%), Positives = 171/395 (43%)
Query: 214 RKDILKDVMIWGEGVLGGDIGGAVDGSV--SQNKTQVDALLPKLLESAVMLDVQNISLGA 271
RK++ D ++G G L A+ V S + T +A PK + ++ IS G
Sbjct: 19 RKNV--DCAVYGCG-LSASGALAIPKLVANSDDVTAGEARFPKRIAYFNTKSIKFISSGF 75
Query: 272 KHAALVTKEGEVFCWGEGKDGRL---GHKVNMD------VSCPKLVECLSGINVQSVSCG 322
+ +K +G G + R G N++ +S K+ + G + +S G
Sbjct: 76 GFSLFASKNR---LYGAGINNRFQIGGQLTNINKYQDYYISAKKIN--IPGDEILEISSG 130
Query: 323 EFQTCALTKSGEIYTWGHNNHGA--------D-LVGERRSRSHWLPRKLFDTLDGVRVSK 373
+ T G ++ G NN G D +VG S LP F T + + +S
Sbjct: 131 RAHSLIRTNLG-VFAIGDNNFGQCGRNPENMDYVVGSEESPL--LPLS-FPTSEPI-IS- 184
Query: 374 VACGEWHTAIVSTSGQLFTYG---DGTFGVLGHGNLQNVSQPKEVES-LRGLKVKSVACG 429
+ C + +V +SG +F++G DG G +G +Q +P +V + G K++ V+
Sbjct: 185 IHCSMDTSFVVDSSGAVFSFGLNEDGQCGNEAYG-IQ--WEPAKVRGDVEGSKIQKVS-- 239
Query: 430 PWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL-----LPTCVTRLVDF 484
D ++ C N G++F WG + G+ E +L + + ++
Sbjct: 240 -----GSTDTLL-ACSEN---GEIFIWGQTEYGQAAGATDEIQLNTSRHVANSLGPIICV 290
Query: 485 DFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD-RSITVVEGKLKE-EFVKGIS 542
D Q+S V G V+ G V G +G P+A+ ++ T ++ L + + V +S
Sbjct: 291 DSTQSS-----VVARNSRGNVFVWGVGVLG-MG-PEAESLKTPTQMDQPLFDGKMVTSVS 343
Query: 543 SGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERE 577
+G+ ++ + G ++ WG+N LGLG Q+R+
Sbjct: 344 AGNSCMSAINEDGRLFIWGENRYSSLGLGH-QKRQ 377
Score = 130 (50.8 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 72/311 (23%), Positives = 129/311 (41%)
Query: 305 PKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNH---GADLVGERRSRSHWLPRK 361
PK + + +++ +S G F +Y G NN G L + + +++ K
Sbjct: 57 PKRIAYFNTKSIKFISSG-FGFSLFASKNRLYGAGINNRFQIGGQLTNINKYQDYYISAK 115
Query: 362 LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGL 421
+ + G + +++ G H+ I + G +F GD FG G N +N+ E L
Sbjct: 116 KIN-IPGDEILEISSGRAHSLIRTNLG-VFAIGDNNFGQCGR-NPENMDYVVGSEESPLL 172
Query: 422 KVKSVACGPW---HTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCV 478
+ P H + +VD G +F++G + G+ G+ + P V
Sbjct: 173 PLSFPTSEPIISIHCSMDTSFVVDS------SGAVFSFGLNEDGQCGNEAYGIQWEPAKV 226
Query: 479 TRLVDFDFVQASCGRMLTV-GLTGLGKVYTMGSAVHGQLGNPKAKDRSITV--VEGKLKE 535
V+ +Q G T+ + G+++ G +GQ + + T V L
Sbjct: 227 RGDVEGSKIQKVSGSTDTLLACSENGEIFIWGQTEYGQAAGATDEIQLNTSRHVANSLGP 286
Query: 536 EFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLG-DSQERETPTFVEA-LRD-RQVES 592
+ + S V S G+V+ WG G LG+G +++ +TPT ++ L D + V S
Sbjct: 287 --IICVDSTQSSVVARNSRGNVFVWGV---GVLGMGPEAESLKTPTQMDQPLFDGKMVTS 341
Query: 593 VVCGSSITAAI 603
V G+S +AI
Sbjct: 342 VSAGNSCMSAI 352
>UNIPROTKB|F1LR42 [details] [associations]
symbol:Rufy1 "Protein Rufy1" species:10116 "Rattus
norvegicus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0030100
"regulation of endocytosis" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR000306 Pfam:PF01363
SMART:SM00064 RGD:1305099 GO:GO:0005737 GO:GO:0046872 GO:GO:0008565
GO:GO:0030100 Gene3D:3.30.40.10 InterPro:IPR017455
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
PROSITE:PS50178 InterPro:IPR004012 Pfam:PF02759 SMART:SM00593
PROSITE:PS50826 CTD:80230 KO:K12482 OMA:AITSFEG
GeneTree:ENSGT00550000074558 IPI:IPI00372367 RefSeq:NP_001094197.1
UniGene:Rn.39348 PRIDE:F1LR42 Ensembl:ENSRNOT00000004740
GeneID:360521 KEGG:rno:360521 NextBio:673085 ArrayExpress:F1LR42
Uniprot:F1LR42
Length = 711
Score = 140 (54.3 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 26/74 (35%), Positives = 40/74 (54%)
Query: 599 ITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNK 658
+ A+ H + + + C QC F R+KH+C NCG FC+ CS+ ++ P+
Sbjct: 633 VNKALKGHTWLKDDEATHCKQCEKDFSISRRKHHCRNCGHIFCNTCSSNELA----LPSY 688
Query: 659 GKPSRVCDTCYNHL 672
KP RVCD+C+ L
Sbjct: 689 PKPVRVCDSCHTLL 702
>MGI|MGI:2429762 [details] [associations]
symbol:Rufy1 "RUN and FYVE domain containing 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005768
"endosome" evidence=IEA] [GO:0005770 "late endosome" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0006897 "endocytosis" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0008565 "protein transporter
activity" evidence=IDA] [GO:0015031 "protein transport"
evidence=IDA] [GO:0016020 "membrane" evidence=IEA] [GO:0030100
"regulation of endocytosis" evidence=IDA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR000306 Pfam:PF01363
SMART:SM00064 MGI:MGI:2429762 GO:GO:0005737 GO:GO:0031901
GO:GO:0046872 GO:GO:0008565 GO:GO:0006897 GO:GO:0030100
GO:GO:0008289 Gene3D:3.30.40.10 InterPro:IPR017455
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
PROSITE:PS50178 EMBL:AL645904 InterPro:IPR004012 Pfam:PF02759
SMART:SM00593 PROSITE:PS50826 CTD:80230 eggNOG:NOG270133
HOVERGEN:HBG057053 KO:K12482 OMA:AITSFEG EMBL:AK046625
EMBL:AK046633 EMBL:AK051178 EMBL:AJ250024 IPI:IPI00222147
RefSeq:NP_766145.1 UniGene:Mm.390400 ProteinModelPortal:Q8BIJ7
SMR:Q8BIJ7 IntAct:Q8BIJ7 STRING:Q8BIJ7 PhosphoSite:Q8BIJ7
PaxDb:Q8BIJ7 PRIDE:Q8BIJ7 DNASU:216724 Ensembl:ENSMUST00000020643
GeneID:216724 KEGG:mmu:216724 UCSC:uc007isn.1
GeneTree:ENSGT00550000074558 HOGENOM:HOG000030913 InParanoid:Q8BIJ7
OrthoDB:EOG41NTKP NextBio:375264 Bgee:Q8BIJ7 CleanEx:MM_RUFY1
Genevestigator:Q8BIJ7 GermOnline:ENSMUSG00000020375 Uniprot:Q8BIJ7
Length = 712
Score = 140 (54.3 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 26/74 (35%), Positives = 40/74 (54%)
Query: 599 ITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNK 658
+ A+ H + + + C QC F R+KH+C NCG FC+ CS+ ++ P+
Sbjct: 634 VNKALKGHTWLKDDEATHCKQCEKDFSISRRKHHCRNCGHIFCNTCSSNELA----LPSY 689
Query: 659 GKPSRVCDTCYNHL 672
KP RVCD+C+ L
Sbjct: 690 PKPVRVCDSCHTLL 703
>UNIPROTKB|Q0V8S0 [details] [associations]
symbol:HGS "Hepatocyte growth factor-regulated tyrosine
kinase substrate" species:9913 "Bos taurus" [GO:0032585
"multivesicular body membrane" evidence=IEA] [GO:0031901 "early
endosome membrane" evidence=IEA] [GO:0046426 "negative regulation
of JAK-STAT cascade" evidence=IEA] [GO:0019904 "protein domain
specific binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] InterPro:IPR000306 InterPro:IPR002014 Pfam:PF00790
Pfam:PF01363 PROSITE:PS50179 SMART:SM00064 GO:GO:0006886
GO:GO:0031901 GO:GO:0046872 GO:GO:0032585 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 eggNOG:NOG257212 InterPro:IPR003903
SMART:SM00726 PROSITE:PS50330 Gene3D:1.25.40.90 InterPro:IPR008942
SUPFAM:SSF48464 GO:GO:0046426 InterPro:IPR018205 SMART:SM00288
EMBL:BT026148 EMBL:BC111313 IPI:IPI00697763 RefSeq:NP_001039554.1
UniGene:Bt.6724 ProteinModelPortal:Q0V8S0 SMR:Q0V8S0 STRING:Q0V8S0
PRIDE:Q0V8S0 Ensembl:ENSBTAT00000000527 GeneID:511582
KEGG:bta:511582 CTD:9146 GeneTree:ENSGT00670000098022
HOGENOM:HOG000044175 HOVERGEN:HBG062917 InParanoid:Q0V8S0 KO:K12182
OMA:QEYLEMQ OrthoDB:EOG4H463C NextBio:20869998 InterPro:IPR024641
InterPro:IPR017073 Pfam:PF12210 PIRSF:PIRSF036956 Uniprot:Q0V8S0
Length = 777
Score = 127 (49.8 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 26/64 (40%), Positives = 33/64 (51%)
Query: 613 DQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNKG--KPSRVCDTCYN 670
D C +CR+ FG +KH+C CG FC CS+K S P G K RVC+ C+
Sbjct: 162 DAEECHRCRVQFGVMTRKHHCRACGQIFCGKCSSKY----STIPKFGIEKEVRVCEPCFE 217
Query: 671 HLQK 674
L K
Sbjct: 218 QLNK 221
Score = 63 (27.2 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 26/108 (24%), Positives = 48/108 (44%)
Query: 912 SLCSSPIVFSNKLKS--VYGRELCHDNSSGSVEDSKVARTEPQQKGTKASKLEYAEQYEP 969
+L ++ F N++KS V GR + +D++ S+ S + PQ ++L+ Y
Sbjct: 409 ALQNAVTTFVNRMKSNHVRGRSITNDSAVLSLFQS-INTMHPQLLEL-LNQLDERRLYYE 466
Query: 970 GIYITFTTLPSGQKGLKRVRFSRRRFTEKAAERWWEENQVVVYQKYGI 1017
G+ + + L +R R +AAE + Q+ + QK I
Sbjct: 467 GLQDKLAQIRDARGALSALREEHREKLRRAAEEAERQRQIQLAQKLEI 514
>UNIPROTKB|Q96T51 [details] [associations]
symbol:RUFY1 "RUN and FYVE domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006897 "endocytosis" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0008565 "protein transporter
activity" evidence=IEA] [GO:0030100 "regulation of endocytosis"
evidence=IEA] [GO:0031901 "early endosome membrane" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001841
InterPro:IPR000306 Pfam:PF01363 SMART:SM00064 GO:GO:0031901
GO:GO:0046872 GO:GO:0008565 GO:GO:0008270 GO:GO:0006897
GO:GO:0030100 GO:GO:0008289 Gene3D:3.30.40.10 InterPro:IPR017455
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
PROSITE:PS50178 InterPro:IPR004012 Pfam:PF02759 SMART:SM00593
PROSITE:PS50826 EMBL:AF312367 EMBL:AK025904 EMBL:AK075021
EMBL:BC032571 EMBL:AF361055 EMBL:AB209507 IPI:IPI00465429
IPI:IPI00556586 IPI:IPI00744637 RefSeq:NP_001035541.1
RefSeq:NP_001035542.1 RefSeq:NP_079434.3 UniGene:Hs.306769 PDB:2YQM
PDB:2YW8 PDBsum:2YQM PDBsum:2YW8 ProteinModelPortal:Q96T51
SMR:Q96T51 IntAct:Q96T51 STRING:Q96T51 PhosphoSite:Q96T51
DMDM:110282993 PaxDb:Q96T51 PRIDE:Q96T51 DNASU:80230
Ensembl:ENST00000319449 Ensembl:ENST00000377001
Ensembl:ENST00000393438 Ensembl:ENST00000437570 GeneID:80230
KEGG:hsa:80230 UCSC:uc003mka.1 CTD:80230 GeneCards:GC05P178977
HGNC:HGNC:19760 HPA:HPA038804 MIM:610327 neXtProt:NX_Q96T51
PharmGKB:PA134944787 eggNOG:NOG270133 HOVERGEN:HBG057053
InParanoid:Q96T51 KO:K12482 OMA:AITSFEG ChiTaRS:RUFY1
EvolutionaryTrace:Q96T51 GenomeRNAi:80230 NextBio:70661 Bgee:Q96T51
CleanEx:HS_RUFY1 Genevestigator:Q96T51 GermOnline:ENSG00000176783
Uniprot:Q96T51
Length = 708
Score = 139 (54.0 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 26/74 (35%), Positives = 40/74 (54%)
Query: 599 ITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNK 658
+ A+ H + + + C QC F R+KH+C NCG FC+ CS+ ++ P+
Sbjct: 630 VNQALKGHAWLKDDEATHCRQCEKEFSISRRKHHCRNCGHIFCNTCSSNELA----LPSY 685
Query: 659 GKPSRVCDTCYNHL 672
KP RVCD+C+ L
Sbjct: 686 PKPVRVCDSCHTLL 699
>FB|FBgn0025381 [details] [associations]
symbol:rush "rush hour" species:7227 "Drosophila
melanogaster" [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
[GO:0006897 "endocytosis" evidence=IGI] [GO:0005769 "early
endosome" evidence=IDA] [GO:0044448 "cell cortex part"
evidence=IDA] [GO:0035091 "phosphatidylinositol binding"
evidence=IDA] [GO:0008333 "endosome to lysosome transport"
evidence=IMP] [GO:0005770 "late endosome" evidence=IDA] [GO:0007032
"endosome organization" evidence=IMP] [GO:0016324 "apical plasma
membrane" evidence=IDA] Pfam:PF00169 InterPro:IPR000306
InterPro:IPR001849 Pfam:PF01363 PROSITE:PS50003 SMART:SM00064
SMART:SM00233 Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0046872
GO:GO:0016324 EMBL:AE014298 GO:GO:0006897 GO:GO:0005770
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 GO:GO:0008333
GO:GO:0035091 GO:GO:0007032 GO:GO:0005769
GeneTree:ENSGT00680000099588 GO:GO:0044448 HSSP:Q15075
EMBL:AL031027 eggNOG:NOG308864 OMA:INKCVSD EMBL:BT003610
EMBL:BT056254 PIR:T13601 RefSeq:NP_569923.2 UniGene:Dm.7010
SMR:O76902 DIP:DIP-21949N MINT:MINT-767382 STRING:O76902
EnsemblMetazoa:FBtr0070259 GeneID:31105 KEGG:dme:Dmel_CG14782
UCSC:CG14782-RA FlyBase:FBgn0025381 InParanoid:O76902
OrthoDB:EOG4BRV2C GenomeRNAi:31105 NextBio:771964 Uniprot:O76902
Length = 316
Score = 132 (51.5 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 26/67 (38%), Positives = 35/67 (52%)
Query: 613 DQSSCSQCRMP-FGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNH 671
D S C C+ F F +++H+C NCG C+ CS KK + L K RVCD CY
Sbjct: 154 DASVCMHCKKTQFTFIQRRHHCRNCGAVVCAGCSAKKFL---LPQQSTKALRVCDACYER 210
Query: 672 LQKITHS 678
L+ + S
Sbjct: 211 LKHVPSS 217
>MGI|MGI:104681 [details] [associations]
symbol:Hgs "HGF-regulated tyrosine kinase substrate"
species:10090 "Mus musculus" [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005768 "endosome" evidence=ISO] [GO:0005769 "early endosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=ISO] [GO:0006810
"transport" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0008333 "endosome to lysosome
transport" evidence=ISO] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=ISO] [GO:0016301
"kinase activity" evidence=IEA] [GO:0016310 "phosphorylation"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0030141 "secretory granule" evidence=ISO]
[GO:0046426 "negative regulation of JAK-STAT cascade" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000306
InterPro:IPR002014 Pfam:PF00790 Pfam:PF01363 PROSITE:PS50179
SMART:SM00064 MGI:MGI:104681 GO:GO:0005829 GO:GO:0005737
GO:GO:0006886 GO:GO:0031901 GO:GO:0046872 GO:GO:0030141
GO:GO:0032585 Gene3D:3.30.40.10 InterPro:IPR017455
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
PROSITE:PS50178 eggNOG:NOG257212 GO:GO:0008333 InterPro:IPR003903
SMART:SM00726 PROSITE:PS50330 Gene3D:1.25.40.90 InterPro:IPR008942
SUPFAM:SSF48464 GO:GO:0046426 InterPro:IPR018205 SMART:SM00288
CTD:9146 HOVERGEN:HBG062917 KO:K12182 InterPro:IPR024641
InterPro:IPR017073 Pfam:PF12210 PIRSF:PIRSF036956 EMBL:D50050
EMBL:AK046299 EMBL:BC003239 IPI:IPI00649267 PIR:I49759
RefSeq:NP_001152800.1 RefSeq:NP_032270.3 UniGene:Mm.7919
ProteinModelPortal:Q99LI8 SMR:Q99LI8 DIP:DIP-29102N IntAct:Q99LI8
MINT:MINT-267768 STRING:Q99LI8 PhosphoSite:Q99LI8 PaxDb:Q99LI8
PRIDE:Q99LI8 GeneID:15239 KEGG:mmu:15239 UCSC:uc007msx.2
InParanoid:Q99LI8 NextBio:287839 Bgee:Q99LI8 CleanEx:MM_HGS
Genevestigator:Q99LI8 GermOnline:ENSMUSG00000025793 Uniprot:Q99LI8
Length = 775
Score = 129 (50.5 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 27/64 (42%), Positives = 33/64 (51%)
Query: 613 DQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNKG--KPSRVCDTCYN 670
D C +CR+ FG +KH+C CG FC CS+K S P G K RVC+ CY
Sbjct: 162 DAEECHRCRVQFGVVTRKHHCRACGQIFCGKCSSKY----STIPKFGIEKEVRVCEPCYE 217
Query: 671 HLQK 674
L K
Sbjct: 218 QLNK 221
Score = 59 (25.8 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 24/100 (24%), Positives = 44/100 (44%)
Query: 920 FSNKLKSVY--GRELCHDNSSGSVEDSKVARTEPQQKGTKASKLEYAEQYEPGIYITFTT 977
F N++KS + GR + +D++ S+ S + PQ ++L+ Y G+
Sbjct: 417 FVNRMKSNHMRGRSITNDSAVLSLFQS-INTMHPQLLEL-LNQLDERRLYYEGLQDKLAQ 474
Query: 978 LPSGQKGLKRVRFSRRRFTEKAAERWWEENQVVVYQKYGI 1017
+ + L +R R +AAE + Q+ + QK I
Sbjct: 475 IRDARGALSALREEHREKLRRAAEEAERQRQIQLAQKLEI 514
>UNIPROTKB|O14964 [details] [associations]
symbol:HGS "Hepatocyte growth factor-regulated tyrosine
kinase substrate" species:9606 "Homo sapiens" [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0008333 "endosome to lysosome
transport" evidence=IEA] [GO:0030141 "secretory granule"
evidence=IEA] [GO:0031901 "early endosome membrane" evidence=IEA]
[GO:0032585 "multivesicular body membrane" evidence=IEA]
[GO:0016197 "endosomal transport" evidence=NAS;TAS] [GO:0019904
"protein domain specific binding" evidence=IPI] [GO:0005515
"protein binding" evidence=IPI] [GO:0007165 "signal transduction"
evidence=TAS] [GO:0008285 "negative regulation of cell
proliferation" evidence=TAS] [GO:0005769 "early endosome"
evidence=IDA] [GO:0005768 "endosome" evidence=IDA] [GO:0042176
"regulation of protein catabolic process" evidence=TAS] [GO:0046426
"negative regulation of JAK-STAT cascade" evidence=IDA] [GO:0005829
"cytosol" evidence=TAS] [GO:0007173 "epidermal growth factor
receptor signaling pathway" evidence=TAS] [GO:0016044 "cellular
membrane organization" evidence=TAS] [GO:0042059 "negative
regulation of epidermal growth factor receptor signaling pathway"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0043231
"intracellular membrane-bounded organelle" evidence=IDA]
Reactome:REACT_11123 InterPro:IPR000306 InterPro:IPR002014
Pfam:PF00790 Pfam:PF01363 PROSITE:PS50179 SMART:SM00064
GO:GO:0005829 Reactome:REACT_111102 Reactome:REACT_116125
GO:GO:0007173 GO:GO:0006886 GO:GO:0008285 GO:GO:0031901
GO:GO:0046872 GO:GO:0030141 GO:GO:0016197 GO:GO:0032585
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 eggNOG:NOG257212
GO:GO:0008333 InterPro:IPR003903 SMART:SM00726 PROSITE:PS50330
Pathway_Interaction_DB:met_pathway GO:GO:0005769 GO:GO:0042176
Gene3D:1.25.40.90 InterPro:IPR008942 SUPFAM:SSF48464 GO:GO:0016044
GO:GO:0042059 GO:GO:0046426 InterPro:IPR018205 SMART:SM00288
CTD:9146 HOGENOM:HOG000044175 HOVERGEN:HBG062917 KO:K12182
OMA:QEYLEMQ OrthoDB:EOG4H463C InterPro:IPR024641 InterPro:IPR017073
Pfam:PF12210 PIRSF:PIRSF036956 EMBL:U43895 EMBL:D84064
EMBL:AF260566 EMBL:BT009754 EMBL:BC003565 IPI:IPI00006176
IPI:IPI00916785 RefSeq:NP_004703.1 UniGene:Hs.741450 PDB:2D3G
PDB:3F1I PDB:3OBQ PDB:3ZYQ PDB:4AVX PDBsum:2D3G PDBsum:3F1I
PDBsum:3OBQ PDBsum:3ZYQ PDBsum:4AVX ProteinModelPortal:O14964
SMR:O14964 DIP:DIP-29050N IntAct:O14964 MINT:MINT-234372
STRING:O14964 PhosphoSite:O14964 PaxDb:O14964 PeptideAtlas:O14964
PRIDE:O14964 DNASU:9146 Ensembl:ENST00000329138 GeneID:9146
KEGG:hsa:9146 UCSC:uc002kbg.3 GeneCards:GC17P079651 HGNC:HGNC:4897
HPA:HPA004872 HPA:HPA007728 MIM:604375 neXtProt:NX_O14964
PharmGKB:PA29271 InParanoid:O14964 PhylomeDB:O14964 ChiTaRS:HGS
EvolutionaryTrace:O14964 GenomeRNAi:9146 NextBio:34307
ArrayExpress:O14964 Bgee:O14964 CleanEx:HS_HGS
Genevestigator:O14964 GermOnline:ENSG00000185359 Uniprot:O14964
Length = 777
Score = 129 (50.5 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 39/133 (29%), Positives = 56/133 (42%)
Query: 613 DQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNKG--KPSRVCDTCYN 670
D C +CR+ FG +KH+C CG FC CS+K S P G K RVC+ CY
Sbjct: 162 DAEECHRCRVQFGVMTRKHHCRACGQIFCGKCSSKY----STIPKFGIEKEVRVCEPCYE 217
Query: 671 HLQKITHSGRLLKQENQSPRNLLNLQGSLSE-EVKEEKGALTPSRGQSFTSKQSRNVERK 729
L + G+ P L + S+ K ++ AL S++ E +
Sbjct: 218 QLNRKAE-GKATSTTELPPEYLTSPLSQQSQLPPKRDETALQEEEELQLALALSQS-EAE 275
Query: 730 PGECLESASSLSS 742
E L S+ +S
Sbjct: 276 EKERLRQKSTYTS 288
Score = 59 (25.8 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 25/108 (23%), Positives = 48/108 (44%)
Query: 912 SLCSSPIVFSNKLKSVY--GRELCHDNSSGSVEDSKVARTEPQQKGTKASKLEYAEQYEP 969
+L ++ F N++KS + GR + +D++ S+ S + PQ ++L+ Y
Sbjct: 411 ALQNAVTTFVNRMKSNHMRGRSITNDSAVLSLFQS-INGMHPQLLEL-LNQLDERRLYYE 468
Query: 970 GIYITFTTLPSGQKGLKRVRFSRRRFTEKAAERWWEENQVVVYQKYGI 1017
G+ + + L +R R +AAE + Q+ + QK I
Sbjct: 469 GLQDKLAQIRDARGALSALREEHREKLRRAAEEAERQRQIQLAQKLEI 516
>WB|WBGene00017190 [details] [associations]
symbol:F07B7.12 species:6239 "Caenorhabditis elegans"
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR027047
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR012983 Pfam:PF08005 EMBL:FO081059
GeneTree:ENSGT00390000011403 KO:K10693 PANTHER:PTHR12846
eggNOG:NOG240798 RefSeq:NP_505281.1 ProteinModelPortal:Q965Y9
SMR:Q965Y9 STRING:Q965Y9 PaxDb:Q965Y9 EnsemblMetazoa:F07B7.12
GeneID:184118 KEGG:cel:CELE_F07B7.12 UCSC:F07B7.12 CTD:184118
WormBase:F07B7.12 InParanoid:Q965Y9 OMA:KESRITH NextBio:923582
Uniprot:Q965Y9
Length = 1900
Score = 155 (59.6 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 64/273 (23%), Positives = 108/273 (39%)
Query: 332 SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
SG +Y + N G +G + + ++ + LD V +S +A G+ H V+ +G LF
Sbjct: 577 SGHVYGYVSEN-GKIFMGGLHTMRVNVSSQMLNGLDNVMISSLALGKSHGVAVTRNGHLF 635
Query: 392 TYGDGTFGVLGH-GNLQNVSQPKEVESLRGLKVKSVACGPWHT-AAIVDIMVDRCKSNAI 449
T+G G + S P+ + ++ + W T V C + +
Sbjct: 636 TWGLNNMNQCGRVESTSTTSSPRH-SGRQEYQICPIGEHTWLTDTPSVCAQCGLCSARGV 694
Query: 450 G-GKLFTWGDADKGRLGHVD-GERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYT 507
G++ KG + H GE L + R CG + G +
Sbjct: 695 ACGRV----PRPKGTMCHCGVGESTCLRCGLCR---------PCGEVTEPAQPGRAQHVQ 741
Query: 508 MGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQ 567
S Q + + +G + V +S G++H +L S V+T+G N +GQ
Sbjct: 742 FSSTAAPQRST--LHPSRVILSQGP-HDVKVSSVSCGNFHTVLLASDRRVFTFGSNCHGQ 798
Query: 568 LGLGDSQERETPTFVEALRDRQVESVVCGSSIT 600
LG+GD+ + TP V D + V GS+ T
Sbjct: 799 LGVGDTLSKNTPQQVILPSDTVIVQVAAGSNHT 831
Score = 131 (51.2 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 46/169 (27%), Positives = 78/169 (46%)
Query: 305 PKLVECLSGINVQS-VSCGEFQTCA-LTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL 362
PK C G+ + + CG + C +T+ + H + +RS H L
Sbjct: 702 PKGTMCHCGVGESTCLRCGLCRPCGEVTEPAQPGRAQHVQFSST-AAPQRSTLHPSRVIL 760
Query: 363 FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLK 422
V+VS V+CG +HT ++++ ++FT+G G LG G+ + + P++V
Sbjct: 761 SQGPHDVKVSSVSCGNFHTVLLASDRRVFTFGSNCHGQLGVGDTLSKNTPQQVILPSDTV 820
Query: 423 VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGER 471
+ VA G HT I+ ++N G +FT+G KG+L GE+
Sbjct: 821 IVQVAAGSNHT-----IL----RAN--DGSVFTFGAFGKGQLARPAGEK 858
Score = 107 (42.7 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 29/88 (32%), Positives = 44/88 (50%)
Query: 483 DFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG--NPKAKDRSITVVEGKLKEEFVKG 540
D SCG TV L +V+T GS HGQLG + +K+ V+ + +
Sbjct: 766 DVKVSSVSCGNFHTVLLASDRRVFTFGSNCHGQLGVGDTLSKNTPQQVILPS--DTVIVQ 823
Query: 541 ISSGSYHVAVLTSGGSVYTWGKNANGQL 568
+++GS H + + GSV+T+G GQL
Sbjct: 824 VAAGSNHTILRANDGSVFTFGAFGKGQL 851
Score = 80 (33.2 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 18/66 (27%), Positives = 38/66 (57%)
Query: 277 VTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIY 336
V++ G++F G H + ++VS +++ L + + S++ G+ A+T++G ++
Sbjct: 584 VSENGKIFMGGL-------HTMRVNVSS-QMLNGLDNVMISSLALGKSHGVAVTRNGHLF 635
Query: 337 TWGHNN 342
TWG NN
Sbjct: 636 TWGLNN 641
Score = 64 (27.6 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 20/61 (32%), Positives = 32/61 (52%)
Query: 235 GAVDGSVSQN-KTQVDAL-LPKLLESAVMLD------VQNISLGAKHAALVTKEGEVFCW 286
G V G VS+N K + L ++ S+ ML+ + +++LG H VT+ G +F W
Sbjct: 578 GHVYGYVSENGKIFMGGLHTMRVNVSSQMLNGLDNVMISSLALGKSHGVAVTRNGHLFTW 637
Query: 287 G 287
G
Sbjct: 638 G 638
Score = 41 (19.5 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 18/76 (23%), Positives = 34/76 (44%)
Query: 243 QNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVN--M 300
Q QV LP+ L + + ++ + A + + G+V+ G G L N M
Sbjct: 460 QGDLQVPHQLPEFLPANLHPQTVDLHFTREMAFIQARSGKVYYAGNGTRFGLFETGNNWM 519
Query: 301 DVSCPK-LVECLSGIN 315
++ P+ +V+ GI+
Sbjct: 520 ELCLPEPIVQISVGID 535
>UNIPROTKB|E9PS70 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
PANTHER:PTHR22870:SF7 HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058
EMBL:AC124078 IPI:IPI00985461 ProteinModelPortal:E9PS70 SMR:E9PS70
Ensembl:ENST00000532389 ArrayExpress:E9PS70 Bgee:E9PS70
Uniprot:E9PS70
Length = 137
Score = 111 (44.1 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 29/85 (34%), Positives = 38/85 (44%)
Query: 267 ISLGAKHAALVTKEGEVFCWGEG--KDGRL---GHKVNMDVSC--PKLVECLSGINVQSV 319
I+ G +HA T G VF WG G GR G + + + P V L V
Sbjct: 44 IAAGLRHAVAATASGIVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCV 103
Query: 320 SCGEFQTCALTKSGEIYTWGHNNHG 344
G + +LT +GE+Y WG N HG
Sbjct: 104 LAGSDHSASLTDAGEVYVWGSNKHG 128
>ZFIN|ZDB-GENE-070424-66 [details] [associations]
symbol:rufy2 "RUN and FYVE domain containing 2"
species:7955 "Danio rerio" [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR000306 Pfam:PF01363 SMART:SM00064
ZFIN:ZDB-GENE-070424-66 GO:GO:0046872 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 InterPro:IPR004012 Pfam:PF02759
SMART:SM00593 PROSITE:PS50826 HOVERGEN:HBG057053
GeneTree:ENSGT00550000074558 OMA:GQVWLKD EMBL:BX530068
IPI:IPI00884645 UniGene:Dr.117537 Ensembl:ENSDART00000089133
Uniprot:B8A5E2
Length = 698
Score = 136 (52.9 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 25/57 (43%), Positives = 32/57 (56%)
Query: 613 DQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCY 669
D + C C F R+KH+C NCG FC+ACS ++ P KP RVCDTC+
Sbjct: 634 DATHCKLCEKEFSISRRKHHCRNCGEIFCNACSDNELP----LPASPKPVRVCDTCH 686
>UNIPROTKB|Q49AA1 [details] [associations]
symbol:ZFYVE28 "ZFYVE28 protein" species:9606 "Homo
sapiens" [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR000306 Pfam:PF01363 SMART:SM00064 GO:GO:0046872
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 EMBL:AL158068
EMBL:AL645924 UniGene:Hs.292056 HGNC:HGNC:29334
HOGENOM:HOG000113403 EMBL:BC041866 IPI:IPI00968206 SMR:Q49AA1
STRING:Q49AA1 Ensembl:ENST00000508471 HOVERGEN:HBG071045
Uniprot:Q49AA1
Length = 192
Score = 123 (48.4 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 26/55 (47%), Positives = 33/55 (60%)
Query: 617 CSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNKG--KPSRVCDTCY 669
C+ C+ PF R+KH+C +CG FCS CS+ +A L P G KP RVC CY
Sbjct: 128 CTACKAPFTVIRRKHHCRSCGKIFCSRCSSH---SAPL-PRYGQVKPVRVCTHCY 178
>UNIPROTKB|I3L1P5 [details] [associations]
symbol:HGS "Hepatocyte growth factor-regulated tyrosine
kinase substrate" species:9606 "Homo sapiens" [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR000306 InterPro:IPR002014
Pfam:PF00790 Pfam:PF01363 PROSITE:PS50179 SMART:SM00064
GO:GO:0006886 GO:GO:0046872 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 InterPro:IPR003903 SMART:SM00726
PROSITE:PS50330 Gene3D:1.25.40.90 InterPro:IPR008942
SUPFAM:SSF48464 InterPro:IPR018205 SMART:SM00288 HGNC:HGNC:4897
ChiTaRS:HGS EMBL:AC139530 Ensembl:ENST00000572392 Bgee:I3L1P5
Uniprot:I3L1P5
Length = 263
Score = 128 (50.1 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 26/64 (40%), Positives = 33/64 (51%)
Query: 613 DQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNKG--KPSRVCDTCYN 670
D C +CR+ FG +KH+C CG FC CS+K S P G K RVC+ CY
Sbjct: 146 DAEECHRCRVQFGVMTRKHHCRACGQIFCGKCSSKY----STIPKFGIEKEVRVCEPCYE 201
Query: 671 HLQK 674
L +
Sbjct: 202 QLNR 205
>CGD|CAL0000172 [details] [associations]
symbol:orf19.7574 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
SMART:SM00248 CGD:CAL0000172 INTERPRO:IPR000408 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 EMBL:AACQ01000032
PROSITE:PS50012 eggNOG:COG5184 RefSeq:XP_719336.1
ProteinModelPortal:Q5ACR8 GeneID:3638930 KEGG:cal:CaO19.7574
HOGENOM:HOG000094547 Uniprot:Q5ACR8
Length = 1439
Score = 119 (46.9 bits), Expect = 5.1e-05, Sum P(3) = 5.1e-05
Identities = 26/81 (32%), Positives = 45/81 (55%)
Query: 265 QNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCP---KLVECLSGINVQSVSC 321
+ I++ H+ +VT++GE+F G G GRLGH + D++ K +E + ++ V+
Sbjct: 232 KRITISKNHSVVVTQDGELFSCGVGSRGRLGHGLT-DLNNYFKFKRIEFFNDKTIKDVAI 290
Query: 322 GEFQTCALTKSGEIYTWGHNN 342
+ ALT E+Y WG N+
Sbjct: 291 SSNHSIALTTDNEVYAWGLNS 311
Score = 61 (26.5 bits), Expect = 5.1e-05, Sum P(3) = 5.1e-05
Identities = 49/207 (23%), Positives = 87/207 (42%)
Query: 650 INASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQGSLSEEVKEEKGA 709
I+ +LT K KP++V + K++ R K+ + N NL+ + ++ +E
Sbjct: 1224 ISTTLTTAKSKPTKVK---IGPVTKLSQKQR--KRLAAAAANDANLE-QIDQKTTKESST 1277
Query: 710 LTP-SRGQSFTS-KQSRNVERKPGECLESASSLSSGLQRWGQVSCPIRFKTHCHEKSVEP 767
+ P S + T S+N+ P A S +++ +S P K KS
Sbjct: 1278 IAPWSTCVADTPISNSQNINNLP------ALGSSKPKKKFISISRPQSTK-----KSPSL 1326
Query: 768 TPIPKTQMSTHSPLLRKISLGSNFIPIAST---VEKDLSESNKMLNEEVQRLR------- 817
IP + ST + I+ S+F + ST E + ES K+ ++Q
Sbjct: 1327 ISIPSSTASTPFSMAAAITPDSSFNSVYSTPSLTEVMIHESLKLEQAKLQETERKTLVEI 1386
Query: 818 DQARNLEKQCQIGNQKVQECQQKIEEA 844
Q + K + +++VQE Q++E A
Sbjct: 1387 QQEQEFAKWWEEESKRVQEEMQRLEVA 1413
Score = 59 (25.8 bits), Expect = 5.1e-05, Sum P(3) = 5.1e-05
Identities = 32/122 (26%), Positives = 55/122 (45%)
Query: 451 GKLFTWGDAD-KGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMG 509
G +T GD + K + V GE ++ P + +L D D S + T +T L V+
Sbjct: 378 GISYTNGDIEVKVQERSVRGETQVNPKAI-QLRD-DIKCVSTSELCTCVVTTLNDVHVYY 435
Query: 510 SAVHGQLGNPKAK---DRSITVVEGK-LKEEFV--KGISSGSYHVAVLTSGGSVYTWGKN 563
+ H +L K D+ + + + E V K ++ G + +L GSV+++ N
Sbjct: 436 NYQHFKLPKIPMKGHGDKHFDYFKPRRITEAAVIKKIVTRGPENSMILLKNGSVFSFSVN 495
Query: 564 AN 565
AN
Sbjct: 496 AN 497
>UNIPROTKB|Q5ACR8 [details] [associations]
symbol:CaO19.7574 "Potential ankyrin repeat protein"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
SMART:SM00248 CGD:CAL0000172 INTERPRO:IPR000408 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 EMBL:AACQ01000032
PROSITE:PS50012 eggNOG:COG5184 RefSeq:XP_719336.1
ProteinModelPortal:Q5ACR8 GeneID:3638930 KEGG:cal:CaO19.7574
HOGENOM:HOG000094547 Uniprot:Q5ACR8
Length = 1439
Score = 119 (46.9 bits), Expect = 5.1e-05, Sum P(3) = 5.1e-05
Identities = 26/81 (32%), Positives = 45/81 (55%)
Query: 265 QNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCP---KLVECLSGINVQSVSC 321
+ I++ H+ +VT++GE+F G G GRLGH + D++ K +E + ++ V+
Sbjct: 232 KRITISKNHSVVVTQDGELFSCGVGSRGRLGHGLT-DLNNYFKFKRIEFFNDKTIKDVAI 290
Query: 322 GEFQTCALTKSGEIYTWGHNN 342
+ ALT E+Y WG N+
Sbjct: 291 SSNHSIALTTDNEVYAWGLNS 311
Score = 61 (26.5 bits), Expect = 5.1e-05, Sum P(3) = 5.1e-05
Identities = 49/207 (23%), Positives = 87/207 (42%)
Query: 650 INASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQGSLSEEVKEEKGA 709
I+ +LT K KP++V + K++ R K+ + N NL+ + ++ +E
Sbjct: 1224 ISTTLTTAKSKPTKVK---IGPVTKLSQKQR--KRLAAAAANDANLE-QIDQKTTKESST 1277
Query: 710 LTP-SRGQSFTS-KQSRNVERKPGECLESASSLSSGLQRWGQVSCPIRFKTHCHEKSVEP 767
+ P S + T S+N+ P A S +++ +S P K KS
Sbjct: 1278 IAPWSTCVADTPISNSQNINNLP------ALGSSKPKKKFISISRPQSTK-----KSPSL 1326
Query: 768 TPIPKTQMSTHSPLLRKISLGSNFIPIAST---VEKDLSESNKMLNEEVQRLR------- 817
IP + ST + I+ S+F + ST E + ES K+ ++Q
Sbjct: 1327 ISIPSSTASTPFSMAAAITPDSSFNSVYSTPSLTEVMIHESLKLEQAKLQETERKTLVEI 1386
Query: 818 DQARNLEKQCQIGNQKVQECQQKIEEA 844
Q + K + +++VQE Q++E A
Sbjct: 1387 QQEQEFAKWWEEESKRVQEEMQRLEVA 1413
Score = 59 (25.8 bits), Expect = 5.1e-05, Sum P(3) = 5.1e-05
Identities = 32/122 (26%), Positives = 55/122 (45%)
Query: 451 GKLFTWGDAD-KGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMG 509
G +T GD + K + V GE ++ P + +L D D S + T +T L V+
Sbjct: 378 GISYTNGDIEVKVQERSVRGETQVNPKAI-QLRD-DIKCVSTSELCTCVVTTLNDVHVYY 435
Query: 510 SAVHGQLGNPKAK---DRSITVVEGK-LKEEFV--KGISSGSYHVAVLTSGGSVYTWGKN 563
+ H +L K D+ + + + E V K ++ G + +L GSV+++ N
Sbjct: 436 NYQHFKLPKIPMKGHGDKHFDYFKPRRITEAAVIKKIVTRGPENSMILLKNGSVFSFSVN 495
Query: 564 AN 565
AN
Sbjct: 496 AN 497
>MGI|MGI:1917682 [details] [associations]
symbol:Rufy2 "RUN and FYVE domain-containing 2"
species:10090 "Mus musculus" [GO:0005634 "nucleus" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000306
Pfam:PF01363 SMART:SM00064 MGI:MGI:1917682 GO:GO:0005634
GO:GO:0046872 Gene3D:3.30.40.10 InterPro:IPR017455
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
PROSITE:PS50178 InterPro:IPR004012 Pfam:PF02759 SMART:SM00593
PROSITE:PS50826 eggNOG:NOG270133 HOVERGEN:HBG057053
GeneTree:ENSGT00550000074558 HOGENOM:HOG000030913 CTD:55680
OMA:GQVWLKD OrthoDB:EOG4JT051 ChiTaRS:RUFY2 EMBL:AF484555
EMBL:AK173195 IPI:IPI00153875 RefSeq:NP_081701.2 UniGene:Mm.234587
UniGene:Mm.274784 ProteinModelPortal:Q8R4C2 SMR:Q8R4C2
STRING:Q8R4C2 PhosphoSite:Q8R4C2 PaxDb:Q8R4C2 PRIDE:Q8R4C2
DNASU:70432 Ensembl:ENSMUST00000119567 GeneID:70432 KEGG:mmu:70432
InParanoid:Q8R4C2 NextBio:331611 Bgee:Q8R4C2 CleanEx:MM_RUFY2
Genevestigator:Q8R4C2 GermOnline:ENSMUSG00000020070 Uniprot:Q8R4C2
Length = 606
Score = 132 (51.5 bits), Expect = 7.9e-05, P = 7.9e-05
Identities = 23/57 (40%), Positives = 33/57 (57%)
Query: 613 DQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCY 669
D + C C F ++KH+C NCG FC+ACS ++ P+ KP RVCD+C+
Sbjct: 542 DATHCKLCEKEFSLSKRKHHCRNCGEIFCNACSDNELP----LPSSPKPVRVCDSCH 594
>ZFIN|ZDB-GENE-030131-6107 [details] [associations]
symbol:hgs "hepatocyte growth factor-regulated
tyrosine kinase substrate" species:7955 "Danio rerio" [GO:0046872
"metal ion binding" evidence=IEA] [GO:0006886 "intracellular
protein transport" evidence=IEA] [GO:0016301 "kinase activity"
evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
InterPro:IPR000306 InterPro:IPR002014 Pfam:PF00790 Pfam:PF01363
PROSITE:PS50179 SMART:SM00064 ZFIN:ZDB-GENE-030131-6107
GO:GO:0006886 GO:GO:0046872 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 InterPro:IPR003903 SMART:SM00726
PROSITE:PS50330 Gene3D:1.25.40.90 InterPro:IPR008942
SUPFAM:SSF48464 InterPro:IPR018205 SMART:SM00288
GeneTree:ENSGT00670000098022 InterPro:IPR024641 InterPro:IPR017073
Pfam:PF12210 PIRSF:PIRSF036956 EMBL:BX682554 EMBL:CU633777
IPI:IPI00933957 Ensembl:ENSDART00000056622 Uniprot:E7F1T8
Length = 773
Score = 119 (46.9 bits), Expect = 8.9e-05, Sum P(2) = 8.9e-05
Identities = 25/62 (40%), Positives = 32/62 (51%)
Query: 613 DQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNKG--KPSRVCDTCYN 670
D C +CR+ FG +KH+C CG FC CS+K S P G K RVC+ C+
Sbjct: 162 DAEECHRCRVQFGVMTRKHHCRACGQIFCGKCSSKY----STIPKFGIEKEVRVCEPCFE 217
Query: 671 HL 672
L
Sbjct: 218 IL 219
Score = 64 (27.6 bits), Expect = 8.9e-05, Sum P(2) = 8.9e-05
Identities = 26/108 (24%), Positives = 48/108 (44%)
Query: 912 SLCSSPIVFSNKLKSVY--GRELCHDNSSGSVEDSKVARTEPQQKGTKASKLEYAEQYEP 969
+L +S F N++KS + GR + +D++ S+ S + PQ ++L+ Y
Sbjct: 414 ALQNSVTTFLNRMKSNHMRGRSITNDSAVLSLFQS-INNMHPQLLEI-LNQLDEKRLYYE 471
Query: 970 GIYITFTTLPSGQKGLKRVRFSRRRFTEKAAERWWEENQVVVYQKYGI 1017
G+ + + L +R R +AAE + Q+ + QK I
Sbjct: 472 GLQDKLAQVRDARAALNALREEHREKLRRAAEEAERQRQIQLAQKLEI 519
>UNIPROTKB|H0YE53 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
PANTHER:PTHR22870:SF7 HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058
EMBL:AC124078 Ensembl:ENST00000533241 Uniprot:H0YE53
Length = 144
Score = 106 (42.4 bits), Expect = 0.00011, P = 0.00011
Identities = 27/68 (39%), Positives = 34/68 (50%)
Query: 503 GKVYTMGSAVHGQLGNPKAKDRSITVVEGK-LKEEFVKGISSGSYHVAVLTSGGSVYTWG 561
G+VY GS HGQL N A +E + E V I SG H+ T G ++TWG
Sbjct: 4 GEVYVWGSNKHGQLANEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWG 63
Query: 562 KNANGQLG 569
+ GQLG
Sbjct: 64 RADYGQLG 71
>UNIPROTKB|B4DFC0 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
PANTHER:PTHR22870:SF7 UniGene:Hs.32470 HGNC:HGNC:17499
EMBL:AC055860 EMBL:AC124058 EMBL:AC124078 EMBL:AK294022
IPI:IPI00977685 SMR:B4DFC0 STRING:B4DFC0 Ensembl:ENST00000532265
UCSC:uc010rcz.1 Uniprot:B4DFC0
Length = 174
Score = 117 (46.2 bits), Expect = 0.00011, P = 0.00011
Identities = 40/133 (30%), Positives = 59/133 (44%)
Query: 267 ISLGAKHAALVTKEGEVFCWGEG--KDGRL---GHKVNMDVSC--PKLVECLSGINVQSV 319
I+ G +HA T G VF WG G GR G + + + P V L V
Sbjct: 44 IAAGLRHAVAATASGIVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCV 103
Query: 320 SCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL-FDTLDGVRVSKVACGE 378
G + +LT +GE+Y WG N HG L E +P+K+ +V+ + G
Sbjct: 104 LAGSDHSASLTDAGEVYVWGSNKHG-QLANEAAFLP--VPQKIEAHCFQNEKVTAIWSG- 159
Query: 379 WHTAIVSTSGQLF 391
W T +V+ +G L+
Sbjct: 160 W-THLVAQTGLLW 171
>UNIPROTKB|F1P8C3 [details] [associations]
symbol:RUFY1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR000306 Pfam:PF01363 SMART:SM00064 GO:GO:0046872
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178
InterPro:IPR004012 Pfam:PF02759 SMART:SM00593 PROSITE:PS50826
GeneTree:ENSGT00550000074558 EMBL:AAEX03007686
Ensembl:ENSCAFT00000000538 Uniprot:F1P8C3
Length = 701
Score = 138 (53.6 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 27/82 (32%), Positives = 45/82 (54%)
Query: 599 ITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNK 658
+ A+ H + + + C QC F R+KH+C +CG FC+ CS+ ++ P+
Sbjct: 623 VNKALKGHTWLKDDEATHCKQCEKEFSISRRKHHCRHCGHIFCNMCSSNELA----LPSY 678
Query: 659 GKPSRVCDTCYNHL-QKITHSG 679
KP RVCD+C+ L Q+ + +G
Sbjct: 679 PKPVRVCDSCHTLLLQRCSSTG 700
Score = 42 (19.8 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 18/58 (31%), Positives = 31/58 (53%)
Query: 227 GVLGGDIGGAVDGSVSQNKTQV---DALLPKLLESAVMLDVQN-ISLG----AKHAAL 276
G GG GGA G+ + ++ Q+ L +++ +V + +Q+ +SLG A HA L
Sbjct: 80 GADGGGDGGAASGARAASRCQMMEERTNLMHMMKLSVKVLLQSALSLGRSLDADHAPL 137
>WB|WBGene00014019 [details] [associations]
symbol:ZK632.12 species:6239 "Caenorhabditis elegans"
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0032266
"phosphatidylinositol-3-phosphate binding" evidence=ISS]
Pfam:PF00169 InterPro:IPR000306 InterPro:IPR001849 Pfam:PF01363
PROSITE:PS50003 SMART:SM00064 SMART:SM00233 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0046872 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 EMBL:Z22181 GO:GO:0032266
GeneTree:ENSGT00680000099588 eggNOG:NOG308864 HOGENOM:HOG000231519
OMA:INKCVSD PIR:D88567 PIR:S40944 RefSeq:NP_499183.1
ProteinModelPortal:P34657 SMR:P34657 DIP:DIP-26764N IntAct:P34657
MINT:MINT-1042247 STRING:P34657 PaxDb:P34657
EnsemblMetazoa:ZK632.12.1 EnsemblMetazoa:ZK632.12.2 GeneID:176397
KEGG:cel:CELE_ZK632.12 UCSC:ZK632.12 CTD:176397 WormBase:ZK632.12
InParanoid:P34657 NextBio:892398 Uniprot:P34657
Length = 266
Score = 124 (48.7 bits), Expect = 0.00013, P = 0.00013
Identities = 37/115 (32%), Positives = 56/115 (48%)
Query: 602 AICLHKSISV--GDQSSCSQC-RMPFGFRRKKHNCYNCGLHFCSACSTK--KIINASLTP 656
A H ++ V G+ C C + F +++H+C NCG C ACS++ +I N
Sbjct: 141 AATAHAAVWVPDGEAVKCMVCGKTQFNLVQRRHHCRNCGRVVCGACSSRTFRIDNV---- 196
Query: 657 NKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPR--NLLNLQGSLSEEVKEEKGA 709
+K KP RVCD C++ L T QE P+ N L+ + S S+ E G+
Sbjct: 197 HK-KPVRVCDHCFDSLSSATPG-----QEESEPKTGNRLHHEDSSSDSEDEVNGS 245
>UNIPROTKB|P34657 [details] [associations]
symbol:ZK632.12 "Uncharacterized protein ZK632.12"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] Pfam:PF00169 InterPro:IPR000306 InterPro:IPR001849
Pfam:PF01363 PROSITE:PS50003 SMART:SM00064 SMART:SM00233
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0046872
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 EMBL:Z22181
GO:GO:0032266 GeneTree:ENSGT00680000099588 eggNOG:NOG308864
HOGENOM:HOG000231519 OMA:INKCVSD PIR:D88567 PIR:S40944
RefSeq:NP_499183.1 ProteinModelPortal:P34657 SMR:P34657
DIP:DIP-26764N IntAct:P34657 MINT:MINT-1042247 STRING:P34657
PaxDb:P34657 EnsemblMetazoa:ZK632.12.1 EnsemblMetazoa:ZK632.12.2
GeneID:176397 KEGG:cel:CELE_ZK632.12 UCSC:ZK632.12 CTD:176397
WormBase:ZK632.12 InParanoid:P34657 NextBio:892398 Uniprot:P34657
Length = 266
Score = 124 (48.7 bits), Expect = 0.00013, P = 0.00013
Identities = 37/115 (32%), Positives = 56/115 (48%)
Query: 602 AICLHKSISV--GDQSSCSQC-RMPFGFRRKKHNCYNCGLHFCSACSTK--KIINASLTP 656
A H ++ V G+ C C + F +++H+C NCG C ACS++ +I N
Sbjct: 141 AATAHAAVWVPDGEAVKCMVCGKTQFNLVQRRHHCRNCGRVVCGACSSRTFRIDNV---- 196
Query: 657 NKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPR--NLLNLQGSLSEEVKEEKGA 709
+K KP RVCD C++ L T QE P+ N L+ + S S+ E G+
Sbjct: 197 HK-KPVRVCDHCFDSLSSATPG-----QEESEPKTGNRLHHEDSSSDSEDEVNGS 245
>WB|WBGene00003084 [details] [associations]
symbol:lst-2 species:6239 "Caenorhabditis elegans"
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0032266
"phosphatidylinositol-3-phosphate binding" evidence=ISS]
InterPro:IPR000306 Pfam:PF01363 SMART:SM00064 GO:GO:0046872
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 EMBL:FO081006
GO:GO:0040027 GO:GO:0032266 GeneTree:ENSGT00670000097904 PIR:T33568
RefSeq:NP_508756.2 HSSP:Q15075 ProteinModelPortal:Q9TZD0 SMR:Q9TZD0
STRING:Q9TZD0 PaxDb:Q9TZD0 EnsemblMetazoa:R160.7 GeneID:180712
KEGG:cel:CELE_R160.7 UCSC:R160.7 CTD:180712 WormBase:R160.7
eggNOG:NOG247076 HOGENOM:HOG000113402 InParanoid:Q9TZD0 OMA:LHIITEM
NextBio:910578 ArrayExpress:Q9TZD0 Uniprot:Q9TZD0
Length = 661
Score = 141 (54.7 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 37/103 (35%), Positives = 49/103 (47%)
Query: 613 DQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNKG--KPSRVCDTCYN 670
D C+ C MPF F R++H+C NCG FC CS I S+ P G + RVC+ CY
Sbjct: 568 DCEQCTACSMPFNFVRRRHHCRNCGRIFCHKCSCNTI---SI-PEHGYDRKVRVCNLCYV 623
Query: 671 HLQKITHSGRLLKQENQSPRNLLNLQGSLSEEVKEEKGALTPS 713
H RL P + +N G+ V E++ A T S
Sbjct: 624 H--------RLNSFGCNEPMSQVNENGATVPSVTEQQSAQTAS 658
Score = 38 (18.4 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 13/78 (16%), Positives = 32/78 (41%)
Query: 191 DTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDA 250
++ P++ S L + + + + + +W + D ++D SV + ++ +
Sbjct: 291 ESAVPEDTSSTLTMSDFRTNATDEEKAKNNQRVWMCD-MPSDSTSSLDSSVQDSSSETTS 349
Query: 251 LLPKLLESAVMLDVQNIS 268
L L S +N+S
Sbjct: 350 LASSALASPHSGSEENVS 367
>UNIPROTKB|J9NZ03 [details] [associations]
symbol:RUFY1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR000306 Pfam:PF01363 SMART:SM00064 GO:GO:0046872
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178
InterPro:IPR004012 Pfam:PF02759 SMART:SM00593 PROSITE:PS50826
OMA:AITSFEG GeneTree:ENSGT00550000074558 EMBL:AAEX03007686
Ensembl:ENSCAFT00000047107 Uniprot:J9NZ03
Length = 744
Score = 138 (53.6 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 27/82 (32%), Positives = 45/82 (54%)
Query: 599 ITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNK 658
+ A+ H + + + C QC F R+KH+C +CG FC+ CS+ ++ P+
Sbjct: 666 VNKALKGHTWLKDDEATHCKQCEKEFSISRRKHHCRHCGHIFCNMCSSNELA----LPSY 721
Query: 659 GKPSRVCDTCYNHL-QKITHSG 679
KP RVCD+C+ L Q+ + +G
Sbjct: 722 PKPVRVCDSCHTLLLQRCSSTG 743
Score = 42 (19.8 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 18/58 (31%), Positives = 31/58 (53%)
Query: 227 GVLGGDIGGAVDGSVSQNKTQV---DALLPKLLESAVMLDVQN-ISLG----AKHAAL 276
G GG GGA G+ + ++ Q+ L +++ +V + +Q+ +SLG A HA L
Sbjct: 124 GADGGGDGGAASGARAASRCQMMEERTNLMHMMKLSVKVLLQSALSLGRSLDADHAPL 181
>UNIPROTKB|J9P6H5 [details] [associations]
symbol:FGD2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0035023 "regulation of Rho protein signal transduction"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0005089 "Rho
guanyl-nucleotide exchange factor activity" evidence=IEA]
Pfam:PF00169 InterPro:IPR000219 InterPro:IPR000306
InterPro:IPR001849 Pfam:PF00621 Pfam:PF01363 PROSITE:PS50003
PROSITE:PS50010 SMART:SM00064 SMART:SM00233 SMART:SM00325
GO:GO:0005543 Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0046872
GO:GO:0005622 GO:GO:0005089 Gene3D:1.20.900.10 SUPFAM:SSF48065
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 GO:GO:0035023
GeneTree:ENSGT00680000099588 CTD:221472 KO:K05721 OMA:YAAPQDM
EMBL:AAEX03008295 RefSeq:XP_538892.2 ProteinModelPortal:J9P6H5
Ensembl:ENSCAFT00000047894 GeneID:481771 KEGG:cfa:481771
Uniprot:J9P6H5
Length = 657
Score = 127 (49.8 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 28/85 (32%), Positives = 46/85 (54%)
Query: 617 CSQCRMPFG-FRRKKHNCYNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKI 675
C +CR PF RR++H+C CG C+ CS + A L + +P+RVC CY L
Sbjct: 466 CMRCREPFNALRRRRHHCRACGFVVCAKCSDYR---AELKYDDNRPNRVCFHCYTFL--- 519
Query: 676 THSGRLLKQENQSPRNLLNLQGSLS 700
+G +L ++ + R + +GS++
Sbjct: 520 --TGNVLPEDREDRRRGILEKGSMT 542
Score = 52 (23.4 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 12/42 (28%), Positives = 23/42 (54%)
Query: 48 SIIYANGERSLDLICKDKVQAESWFLGLRAAISSC-RRSRTF 88
S + + +R+L+L + + + SW +AAI +R+ TF
Sbjct: 388 SFLVSGKQRTLELQARSQEEMISWMQACQAAIDQIEKRNETF 429
>SGD|S000000018 [details] [associations]
symbol:ATS1 "Protein required for modification of wobble
nucleosides in tRNA" species:4932 "Saccharomyces cerevisiae"
[GO:0007017 "microtubule-based process" evidence=IGI;ISS]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=IDA;IPI] [GO:0002098 "tRNA wobble uridine
modification" evidence=IMP] [GO:0000226 "microtubule cytoskeleton
organization" evidence=IGI;IMP] [GO:0007117 "budding cell bud
growth" evidence=IGI;IMP] SGD:S000000018 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0000226 EMBL:L05146 EMBL:BK006935
GO:GO:0007117 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
PIR:S36714 RefSeq:NP_009382.2 ProteinModelPortal:P31386 SMR:P31386
IntAct:P31386 MINT:MINT-2786397 STRING:P31386 PeptideAtlas:P31386
EnsemblFungi:YAL020C GeneID:851213 KEGG:sce:YAL020C CYGD:YAL020c
eggNOG:COG5184 HOGENOM:HOG000163478 KO:K15462 OMA:GAGCATS
OrthoDB:EOG4H75MP NextBio:968094 Genevestigator:P31386
GermOnline:YAL020C GO:GO:0002098 Uniprot:P31386
Length = 333
Score = 104 (41.7 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 34/105 (32%), Positives = 46/105 (43%)
Query: 335 IYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYG 394
+Y +G N G +G P++ DG V K+ACG H+ +++ G L G
Sbjct: 4 VYAFGSN--GQRQLGLGHDEDMDTPQRSVPGDDGAIVRKIACGGNHSVMLTNDGNLVGCG 61
Query: 395 DGTFGVLGHGN-LQNVSQPKEVESLRGLKVKSVACGPWHTAAIVD 438
D G L L+ V + VE V VACG W T IVD
Sbjct: 62 DNRRGELDSAQALRQVHDWRPVEV--PAPVVDVACG-WDTTVIVD 103
Score = 67 (28.6 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 27/108 (25%), Positives = 41/108 (37%)
Query: 544 GSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
G + V+ G VY WG N QL S+ + P V V+ V G +
Sbjct: 136 GCFQNFVVVQGTRVYGWGSNTKCQLQEPKSRSLKEPVLVYDTGSVAVDYVAMGKDFMVIV 195
Query: 604 CLHKSISVGDQSSCSQCRMPFGF----RRKKHN----CYNCGLHFCSA 643
G + + R+P GF ++K+HN C +H +A
Sbjct: 196 ------DEGGRIVHASGRLPTGFELKQQQKRHNLVVLCMWTSIHLWNA 237
>UNIPROTKB|E1BMQ2 [details] [associations]
symbol:RUFY2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR000306 Pfam:PF01363 SMART:SM00064 GO:GO:0046872
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178
InterPro:IPR004012 Pfam:PF02759 SMART:SM00593 PROSITE:PS50826
GeneTree:ENSGT00550000074558 EMBL:DAAA02061815 IPI:IPI00707080
Ensembl:ENSBTAT00000003382 Uniprot:E1BMQ2
Length = 548
Score = 128 (50.1 bits), Expect = 0.00018, P = 0.00018
Identities = 22/57 (38%), Positives = 33/57 (57%)
Query: 613 DQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCY 669
+ + C C F ++KH+C NCG FC+ACS ++ P+ KP RVCD+C+
Sbjct: 484 EATHCKLCEKEFSLSKRKHHCRNCGEIFCNACSDNELP----LPSSPKPVRVCDSCH 536
>UNIPROTKB|F1MEH0 [details] [associations]
symbol:RUFY2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR000306 Pfam:PF01363
SMART:SM00064 GO:GO:0005634 GO:GO:0046872 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 InterPro:IPR004012 Pfam:PF02759
SMART:SM00593 PROSITE:PS50826 GeneTree:ENSGT00550000074558
OMA:GQVWLKD EMBL:DAAA02061815 IPI:IPI00866973
Ensembl:ENSBTAT00000054280 Uniprot:F1MEH0
Length = 550
Score = 128 (50.1 bits), Expect = 0.00018, P = 0.00018
Identities = 22/57 (38%), Positives = 33/57 (57%)
Query: 613 DQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCY 669
+ + C C F ++KH+C NCG FC+ACS ++ P+ KP RVCD+C+
Sbjct: 486 EATHCKLCEKEFSLSKRKHHCRNCGEIFCNACSDNELP----LPSSPKPVRVCDSCH 538
>UNIPROTKB|F1PXC3 [details] [associations]
symbol:RUFY2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR000306 Pfam:PF01363 SMART:SM00064 GO:GO:0046872
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178
InterPro:IPR004012 Pfam:PF02759 SMART:SM00593 PROSITE:PS50826
GeneTree:ENSGT00550000074558 EMBL:AAEX03002774 EMBL:AAEX03002775
Ensembl:ENSCAFT00000021722 Uniprot:F1PXC3
Length = 606
Score = 128 (50.1 bits), Expect = 0.00021, P = 0.00021
Identities = 22/57 (38%), Positives = 33/57 (57%)
Query: 613 DQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCY 669
+ + C C F ++KH+C NCG FC+ACS ++ P+ KP RVCD+C+
Sbjct: 542 EATHCKLCEKEFSLSKRKHHCRNCGEIFCNACSDNELP----LPSSPKPVRVCDSCH 594
>UNIPROTKB|F1P364 [details] [associations]
symbol:RUFY2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0046872 "metal ion binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR000306 Pfam:PF01363
SMART:SM00064 GO:GO:0005634 GO:GO:0046872 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 InterPro:IPR004012 Pfam:PF02759
SMART:SM00593 PROSITE:PS50826 GeneTree:ENSGT00550000074558
OMA:GQVWLKD EMBL:AADN02028014 IPI:IPI00590145
ProteinModelPortal:F1P364 Ensembl:ENSGALT00000006358
ArrayExpress:F1P364 Uniprot:F1P364
Length = 607
Score = 128 (50.1 bits), Expect = 0.00021, P = 0.00021
Identities = 22/57 (38%), Positives = 33/57 (57%)
Query: 613 DQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCY 669
+ + C C F ++KH+C NCG FC+ACS ++ P+ KP RVCD+C+
Sbjct: 543 EATHCKLCEKEFSLSKRKHHCRNCGEIFCNACSDNELP----LPSSPKPVRVCDSCH 595
>UNIPROTKB|H0YD93 [details] [associations]
symbol:RUFY2 "RUN and FYVE domain-containing protein 2"
species:9606 "Homo sapiens" [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR000306 Pfam:PF01363
SMART:SM00064 GO:GO:0005634 GO:GO:0046872 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 InterPro:IPR004012 Pfam:PF02759
SMART:SM00593 PROSITE:PS50826 EMBL:AL136233 EMBL:AC016395
HGNC:HGNC:19761 ChiTaRS:RUFY2 Ensembl:ENST00000466493
Uniprot:H0YD93
Length = 620
Score = 128 (50.1 bits), Expect = 0.00022, P = 0.00022
Identities = 22/57 (38%), Positives = 33/57 (57%)
Query: 613 DQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCY 669
+ + C C F ++KH+C NCG FC+ACS ++ P+ KP RVCD+C+
Sbjct: 556 EATHCKLCEKEFSLSKRKHHCRNCGEIFCNACSDNELP----LPSSPKPVRVCDSCH 608
WARNING: HSPs involving 28 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.131 0.393 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1030 987 0.00098 122 3 11 22 0.43 34
38 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 278
No. of states in DFA: 629 (67 KB)
Total size of DFA: 488 KB (2226 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 96.51u 0.12s 96.63t Elapsed: 00:00:04
Total cpu time: 96.67u 0.12s 96.79t Elapsed: 00:00:04
Start: Tue May 21 17:10:49 2013 End: Tue May 21 17:10:53 2013
WARNINGS ISSUED: 2